HHsearch alignment for GI: 254780218 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=94.83 E-value=0.029 Score=33.80 Aligned_cols=34 Identities=29% Similarity=0.568 Sum_probs=27.2
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCE
Q ss_conf 8886899867888797999999999999779819
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v 35 (225)
T Consensus 26 ~~Gei~gllGpNGAGKTTl~~~l~Gl~~p~~G~i 59 (301)
T TIGR03522 26 QKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSV 59 (301)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
T ss_conf 5981999999999819999999967956897779