HHsearch alignment for GI: 254780218 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=95.65 E-value=0.018 Score=34.98 Aligned_cols=37 Identities=22% Similarity=0.115 Sum_probs=30.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 8689986788879799999999999977981999877
Q gi|254780218|r 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 (225)
Q Consensus 4 g~~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~e 40 (225)
T Consensus 19 ~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~ 55 (151)
T cd00009 19 PKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNA 55 (151)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEH
T ss_conf 9808998999988659999999971213798278547