HHsearch alignment for GI: 254780218 and conserved domain: cd00267
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.40 E-value=0.018 Score=35.02 Aligned_cols=27 Identities=26% Similarity=0.548 Sum_probs=24.1
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 888689986788879799999999999
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L 28 (225)
T Consensus 23 ~~Ge~~~i~G~nGaGKSTLl~~l~gl~ 49 (157)
T cd00267 23 KAGEIVALVGPNGSGKSTLLRAIAGLL 49 (157)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 799799998788999899999995884