HHsearch alignment for GI: 254780218 and conserved domain: cd02029
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes. PRK catalyzes the phosphorylation of D-ribulose 5-phosphate to form D-ribulose 1, 5-biphosphate, using ATP and NADPH produced by the primary reactions of photosynthesis.
Probab=95.16 E-value=0.068 Score=31.58 Aligned_cols=87 Identities=25% Similarity=0.301 Sum_probs=49.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC-------CCHHHHCCCCC-CCCCCHHHHHHHHHHHHHHH
Q ss_conf 89986788879799999999999977981999877889844-------10011001244-45410134567778899999
Q gi|254780218|r 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-------AEAARHVLLSC-GVDEFGAEAEAIVFAAARLD 77 (225)
Q Consensus 6 ~I~iEGiDGsGKsTq~~~L~~~L~~~g~~v~~~~eP~~t~~-------ge~ir~~l~~~-~~~~~~~~~~~lLfaadr~~ 77 (225)
T Consensus 1 IIaVtGsSGAGtsTv~r~f~~IF~re~v~a~vIe--gD~fHryDR~emk~~~~~a~~~g~~~ShfgPe-------AN~fd 71 (277)
T cd02029 1 VIAVTGSSGAGTTTVKRAFEHIFAREGIHPAVVE--GDSFHRYERMEMKMAIAEALDAGRNFSHFGPE-------ANLFD 71 (277)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEE--CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-------CCCHH
T ss_conf 9899338888478799999998720588528996--78665467899999999998647876667844-------44799
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCCC
Q ss_conf 7763565542345258723542431
Q gi|254780218|r 78 HVENVIRPALMEGKILLCDRFLDSS 102 (225)
Q Consensus 78 ~~~~~I~p~L~~g~iVI~DRy~~S~ 102 (225)
T Consensus 72 ~Le~~f~-~y~e~g~g~kr~Y~H~~ 95 (277)
T cd02029 72 LLEELFR-TYGETGRGRSRYYLHSD 95 (277)
T ss_pred HHHHHHH-HHHCCCCCCCCEEECCC
T ss_conf 9999999-98668987642430582