HHsearch alignment for GI: 254780218 and conserved domain: cd03237

>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=96.27  E-value=0.0042  Score=38.81  Aligned_cols=30  Identities=33%  Similarity=0.462  Sum_probs=25.8

Q ss_conf             888689986788879799999999999977
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK   31 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~~~   31 (225)
T Consensus        23 ~~GEiv~liGpNGaGKSTLlk~l~Gll~p~   52 (246)
T cd03237          23 SESEVIGILGPNGIGKTTFIKMLAGVLKPD   52 (246)
T ss_conf             579899999799976999999997787888