HHsearch alignment for GI: 254780218 and conserved domain: cd03238

>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases.
Probab=95.40  E-value=0.017  Score=35.12  Aligned_cols=23  Identities=22%  Similarity=0.430  Sum_probs=20.4

Q ss_conf             88868998678887979999999
Q gi|254780218|r    2 NSGLFISFEGIEGAGKTTHISLL   24 (225)
Q Consensus         2 ~~g~~I~iEGiDGsGKsTq~~~L   24 (225)
T Consensus        19 ~~Ge~~~iiG~nGsGKSTLl~~~   41 (176)
T cd03238          19 PLNVLVVVTGVSGSGKSTLVNEG   41 (176)
T ss_conf             89989999999999899999988