HHsearch alignment for GI: 254780218 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.09 E-value=0.0058 Score=37.96 Aligned_cols=29 Identities=45% Similarity=0.673 Sum_probs=25.9
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 98886899867888797999999999999
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~ 29 (225)
T Consensus 26 i~~Ge~vaivG~sGsGKSTLl~ll~gl~~ 54 (229)
T cd03254 26 IKPGETVAIVGPTGAGKTTLINLLMRFYD 54 (229)
T ss_pred ECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 87999999999999809999999966866