HHsearch alignment for GI: 254780218 and conserved domain: cd03259
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.54 E-value=0.013 Score=35.83 Aligned_cols=29 Identities=31% Similarity=0.572 Sum_probs=25.1
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 98886899867888797999999999999
Q gi|254780218|r 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 (225)
Q Consensus 1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~ 29 (225)
T Consensus 23 i~~Gei~~iiGpnGaGKSTl~~~i~Gl~~ 51 (213)
T cd03259 23 VEPGEFLALLGPSGCGKTTLLRLIAGLER 51 (213)
T ss_pred ECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 88998999999999739999999975999