HHsearch alignment for GI: 254780218 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.29 E-value=0.018 Score=35.03 Aligned_cols=28 Identities=29% Similarity=0.538 Sum_probs=24.4
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8886899867888797999999999999
Q gi|254780218|r 2 NSGLFISFEGIEGAGKTTHISLLKRFLQ 29 (225)
Q Consensus 2 ~~g~~I~iEGiDGsGKsTq~~~L~~~L~ 29 (225)
T Consensus 24 ~~Ge~~~iiG~SGsGKSTll~~i~gL~~ 51 (235)
T cd03261 24 RRGEILAIIGPSGSGKSTLLRLIVGLLR 51 (235)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 7998999999999729999999975999