HHsearch alignment for GI: 254780218 and conserved domain: cd03293

>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.10  E-value=0.0052  Score=38.24  Aligned_cols=29  Identities=24%  Similarity=0.558  Sum_probs=25.4

Q ss_conf             98886899867888797999999999999
Q gi|254780218|r    1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ   29 (225)
Q Consensus         1 M~~g~~I~iEGiDGsGKsTq~~~L~~~L~   29 (225)
T Consensus        27 i~~Ge~~~iiGpsGsGKSTLl~~i~Gl~~   55 (220)
T cd03293          27 VEEGEFVALVGPSGCGKSTLLRIIAGLER   55 (220)
T ss_conf             87998999999999579999999975999