BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780218|ref|YP_003064631.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62] (225 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done Results from round 1 >gi|254780218|ref|YP_003064631.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62] gi|254039895|gb|ACT56691.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62] Length = 225 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 225/225 (100%), Positives = 225/225 (100%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD Sbjct: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL Sbjct: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI Sbjct: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI Sbjct: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 >gi|315122339|ref|YP_004062828.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495741|gb|ADR52340.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 227 Score = 352 bits (902), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 163/224 (72%), Positives = 195/224 (87%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNSGLFISFEGIEG GKTTHIS L FL++ NYDV +TREPGGTP AEAARHVLL+ GVD Sbjct: 1 MNSGLFISFEGIEGVGKTTHISHLAGFLKKNNYDVQITREPGGTPVAEAARHVLLTGGVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EFGA AE+I+F++ RLDHVENVIRPAL+EGKILLCDRFLDSSYAYQGE+D + FLDSL Sbjct: 61 EFGAYAESILFSSIRLDHVENVIRPALIEGKILLCDRFLDSSYAYQGEKDDFKKTFLDSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q++S Q ++PDCTIILDLPVD+GL+R+++RYSL++++ LDYFERKD ++HEKRR+IFLDI Sbjct: 121 QQVSTQGIVPDCTIILDLPVDVGLQRIRHRYSLKKNSSLDYFERKDWIVHEKRRRIFLDI 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 AR+QP+RC IVD+ H FQ VA +ILNIVWEL+QKR P K D Sbjct: 181 ARDQPERCRIVDATHPFQDVAAHILNIVWELMQKRSFPRPPKGD 224 >gi|209549399|ref|YP_002281316.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535155|gb|ACI55090.1| dTMP kinase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 226 Score = 234 bits (597), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 112/211 (53%), Positives = 150/211 (71%), Gaps = 3/211 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLF++FEG EGAGK+T I L L+ +DV VTREPGG+P AEA RHVLLS + Sbjct: 4 GTGLFVTFEGGEGAGKSTQIRRLAEALKGDGHDVLVTREPGGSPGAEAVRHVLLSGAAEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + Q F+++LQ Sbjct: 64 FGTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGVTGNLQPDFIETLQ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I++ VMPDCT+ILD+P IGL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 124 RIAINGVMPDCTVILDIPAKIGLERAQKRAA---TDAPDRFEKERLETHEKRREAFLDIA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH++++ S +++A I+ IV +L+ Sbjct: 181 AREPERCHVINAMQSEEAIAAEIVAIVRQLM 211 >gi|241204716|ref|YP_002975812.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858606|gb|ACS56273.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 236 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 110/211 (52%), Positives = 151/211 (71%), Gaps = 3/211 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLF++FEG EGAGK+T I L L+ + +DV +TREPGG+P AEA RHVLLS + Sbjct: 14 GTGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEA 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL GK++LCDRF+DSS YQG + + F+++LQ Sbjct: 74 FGTRMEAILFAAARNDHVEEVIRPALASGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQ 133 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I++ VMPDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 134 RIAINGVMPDCTVILDIPAKVGLERAQKRAA---ADAPDRFEKERLETHEKRREAFLDIA 190 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH+V++ S +++A IL IV +L+ Sbjct: 191 AREPERCHVVNAMQSEEAIAAEILAIVQQLL 221 >gi|116252223|ref|YP_768061.1| thymidylate kinase [Rhizobium leguminosarum bv. viciae 3841] gi|115256871|emb|CAK07965.1| putative thymidylate kinase (ec 2.7.4.9) (dtmp kinase) [Rhizobium leguminosarum bv. viciae 3841] Length = 226 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 109/211 (51%), Positives = 151/211 (71%), Gaps = 3/211 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLF++FEG EGAGK+T I L L+ + +DV +TREPGG+P AEA RHVLLS + Sbjct: 4 GTGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL GK++LCDRF+DSS YQG + + F+++LQ Sbjct: 64 FGTRMEAILFAAARNDHVEEVIRPALAAGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I++ VMPDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 124 RIAINGVMPDCTVILDIPAKVGLERAQKRAA---ADAPDRFEKERLETHEKRREAFLDIA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH+V++ + +++A IL IV +L+ Sbjct: 181 AREPERCHVVNAMQTEEAIAAEILAIVKQLL 211 >gi|190891837|ref|YP_001978379.1| thymidylate kinase protein [Rhizobium etli CIAT 652] gi|190697116|gb|ACE91201.1| thymidylate kinase protein [Rhizobium etli CIAT 652] Length = 236 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/210 (51%), Positives = 150/210 (71%), Gaps = 3/210 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLF++FEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHVLLS + Sbjct: 14 GTGLFVTFEGGEGAGKSTQIRRLAETLKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEA 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + + F+++LQ Sbjct: 74 FGTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQ 133 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I++ V+PDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 134 RIAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIA 190 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+RCH+V++ + +++A IL IV +L Sbjct: 191 AREPERCHVVNAMQTEEAIAAEILAIVKQL 220 >gi|218682276|ref|ZP_03529877.1| thymidylate kinase [Rhizobium etli CIAT 894] Length = 226 Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 110/211 (52%), Positives = 148/211 (70%), Gaps = 3/211 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLF++FEG EGAGK+T I L L+ + DV +TREPGG+P AEA RHVLLS + Sbjct: 4 GTGLFVTFEGGEGAGKSTQIRRLAAALKGEGQDVLMTREPGGSPGAEAVRHVLLSGAAEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG S F+++LQ Sbjct: 64 YGTRMEAILFAAARNDHVEEVIRPALTAGKIVLCDRFMDSSRVYQGITGSLDPDFIETLQ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ V PDCT+ILD+P IGL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 124 RVAINGVTPDCTVILDIPAKIGLERAQKRAA---ADAPDRFEKERLETHEKRREAFLDIA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH+V++ S +++A IL IV +L+ Sbjct: 181 AREPERCHVVNAMQSEEAIAAEILAIVKQLL 211 >gi|86357778|ref|YP_469670.1| thymidylate kinase protein [Rhizobium etli CFN 42] gi|86281880|gb|ABC90943.1| thymidylate kinase protein [Rhizobium etli CFN 42] Length = 236 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 108/210 (51%), Positives = 148/210 (70%), Gaps = 3/210 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLF++FEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHVLLS + Sbjct: 14 GTGLFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEA 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + F+++LQ Sbjct: 74 FGTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLDPDFIETLQ 133 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I++ V+PDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 134 RIAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIA 190 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+RC +V++ + +++A IL IV +L Sbjct: 191 AREPERCRVVNAMQTEEAIAAEILAIVKQL 220 >gi|222086013|ref|YP_002544545.1| thymidylate kinase [Agrobacterium radiobacter K84] gi|221723461|gb|ACM26617.1| thymidylate kinase [Agrobacterium radiobacter K84] Length = 227 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 112/215 (52%), Positives = 149/215 (69%), Gaps = 6/215 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF+SFEG EGAGK+T I L +L+ +DV VTREPGG+P AEA RHVLLS + F Sbjct: 5 TGLFVSFEGGEGAGKSTQIRRLAAWLRELGHDVLVTREPGGSPGAEAVRHVLLSGAAEMF 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE +IRPAL G I+LCDRF+DSS YQG + + F+++LQ Sbjct: 65 GTRMEAILFAAARNDHVEEIIRPALAHGTIVLCDRFMDSSRVYQGITGNLEPDFIEALQR 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V V+PDCT+ILD+P ++GL+R + R S A D FE++++ HEKRR+ FLDIA Sbjct: 125 VAVNGVVPDCTLILDIPAELGLERARKRASA--DAAPDRFEKEELQTHEKRREAFLDIAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 PDRCH+VD+ +A I I ++KR+S Sbjct: 183 RDPDRCHVVDAQRGEDVIADEIAAI----IEKRLS 213 >gi|218463772|ref|ZP_03503863.1| thymidylate kinase [Rhizobium etli Kim 5] Length = 220 Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 105/207 (50%), Positives = 147/207 (71%), Gaps = 3/207 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHVLLS + FG Sbjct: 1 MFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAFGT 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + + F+++LQ I+ Sbjct: 61 RMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQRIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V+PDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA + Sbjct: 121 INGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAARE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P+RC ++++ + +++A IL IV +L Sbjct: 178 PERCRVINAMQTEEAIAAEILAIVKQL 204 >gi|222148589|ref|YP_002549546.1| thymidylate kinase [Agrobacterium vitis S4] gi|221735575|gb|ACM36538.1| thymidylate kinase [Agrobacterium vitis S4] Length = 221 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 108/217 (49%), Positives = 142/217 (65%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + SGLF++FEG EGAGK+T I LL L+ + V +REPGG+P AEA RHVLLS + Sbjct: 3 VGSGLFVTFEGGEGAGKSTQIRLLANALEALGFAVVTSREPGGSPCAEALRHVLLSGAAE 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG E EAI+FAAAR DHVE +RPAL+ G ++LCDRF+DSS YQG + F++ L Sbjct: 63 PFGVEMEAILFAAARNDHVEARLRPALLRGDMVLCDRFMDSSRVYQGATGNLSSAFIERL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q I+V V+PD TIILDLP +IGL R +NR D FE++++ IHE+RR+ FL I Sbjct: 123 QAIAVDGVVPDLTIILDLPANIGLARAKNRAGALGEDAPDRFEKEEIAIHERRREAFLAI 182 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 AR +P RC +VD+ + +A I V L+ V Sbjct: 183 ARAEPARCRVVDARAGIEQIAEEIFAAVKPLLPHNVG 219 >gi|307312732|ref|ZP_07592363.1| thymidylate kinase [Sinorhizobium meliloti BL225C] gi|307317216|ref|ZP_07596657.1| thymidylate kinase [Sinorhizobium meliloti AK83] gi|306897304|gb|EFN28049.1| thymidylate kinase [Sinorhizobium meliloti AK83] gi|306899457|gb|EFN30089.1| thymidylate kinase [Sinorhizobium meliloti BL225C] Length = 234 Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 3/224 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EGAGK+T + LL L + Y V TREPGG+ AEA RHVLLS + Sbjct: 11 LAKGFFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS YQG + + F+++L Sbjct: 71 SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++V V+PDCTII DLP +GL+R + R + + D FE++ + HEKRR+ FLDI Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 A P+RC +VD+ ++A +L++V L+ P S + Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231 >gi|150396510|ref|YP_001326977.1| thymidylate kinase [Sinorhizobium medicae WSM419] gi|150028025|gb|ABR60142.1| dTMP kinase [Sinorhizobium medicae WSM419] Length = 234 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 106/212 (50%), Positives = 142/212 (66%), Gaps = 3/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + GLFI+FEG EGAGK+T + LL L + Y V TREPGG+ AEA RHVLLS + Sbjct: 11 LAKGLFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSAGAEAVRHVLLSGAAE 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS YQG + + F+++L Sbjct: 71 SFGVRMEAILFAAARSDHVEEVIRPALEDGTIVLCDRFMDSSRVYQGVTGNLEPSFVETL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++V V+PDCTII DLP IGL+R + R + + D FE++ + HEKRR+ FLDI Sbjct: 131 ERVAVNGVIPDCTIIFDLPAAIGLERARRRAA---NNSPDRFEKEQLETHEKRREAFLDI 187 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A RC +VD+ ++A ++LN+V L+ Sbjct: 188 AATDSKRCRVVDANRPPAAIAADVLNLVKALL 219 >gi|15965357|ref|NP_385710.1| putative thymidylate kinase, dTMP kinase protein [Sinorhizobium meliloti 1021] gi|23821796|sp|Q92PW7|KTHY_RHIME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|15074537|emb|CAC46183.1| Putative thymidylate kinase, dTMP kinase [Sinorhizobium meliloti 1021] Length = 234 Score = 214 bits (545), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 105/224 (46%), Positives = 144/224 (64%), Gaps = 3/224 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T + LL L + Y V TREPGG+ AEA RHVLLS + Sbjct: 11 LAKGFFITFEGGEGTGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS YQG + + F+++L Sbjct: 71 SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++V V+PDCTII DLP +GL+R + R + + D FE++ + HEKRR+ FLDI Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 A P+RC +VD+ ++A +L++V L+ P S + Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231 >gi|153009407|ref|YP_001370622.1| thymidylate kinase [Ochrobactrum anthropi ATCC 49188] gi|151561295|gb|ABS14793.1| dTMP kinase [Ochrobactrum anthropi ATCC 49188] Length = 218 Score = 214 bits (545), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 101/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL + L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 6 SGLFITFEGGEGAGKSTQIALLAKHLRANGFDPVITREPGGSPGAEAIRHVILSGNAENY 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA EA++F AAR DHV +IRPAL EG+++LCDRF+DSS AYQG + ++ +++ Sbjct: 66 GAAMEALLFGAARADHVNQLIRPALNEGRVVLCDRFIDSSRAYQGVTGNLDRTYMAAVER 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ VMPD TIILD+P + GL R R R S D FE++D+ +HE RRQ FL IA Sbjct: 126 IAIDGVMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+RC ++D+ +A+++ V +++R Sbjct: 183 AEPERCKVIDADRLQDQIASDVAKEVDSALKER 215 >gi|227822155|ref|YP_002826126.1| thymidylate kinase [Sinorhizobium fredii NGR234] gi|227341155|gb|ACP25373.1| thymidylate kinase [Sinorhizobium fredii NGR234] Length = 234 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 109/221 (49%), Positives = 147/221 (66%), Gaps = 3/221 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++FEG EGAGK+T + LL L + YDV TREPGG+ AEA RHVLLS + Sbjct: 12 TKGLFVTFEGGEGAGKSTQMRLLADSLSGRGYDVLTTREPGGSLGAEAVRHVLLSGAAES 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL +G+I+LCDRF+DSS YQG + + F+++L+ Sbjct: 72 FGVRMEAILFAAARSDHVEEVIRPALQQGRIVLCDRFMDSSRVYQGVTGNLEPGFVETLE 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++V V+PD TII DLP + GL+R + R SL + D FE++ + HEKRR+ FLDIA Sbjct: 132 RVAVNGVVPDRTIIFDLPAEAGLERARRR-SL--NVDPDRFEKEQLETHEKRREAFLDIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 P+RC +VD+ + +A +L +V L+ P SS+ Sbjct: 189 EADPERCRVVDATLPPEVIAAEVLRLVEALLPGDGEPQSSR 229 >gi|325292851|ref|YP_004278715.1| Thymidylate kinase [Agrobacterium sp. H13-3] gi|325060704|gb|ADY64395.1| Thymidylate kinase [Agrobacterium sp. H13-3] Length = 224 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 104/213 (48%), Positives = 143/213 (67%), Gaps = 2/213 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFISFEG EGAGK+T I L L+ + +DV VTREPGG+P AEA RHVLLS + Sbjct: 4 KTGLFISFEGGEGAGKSTQIRTLAEALRDRGFDVIVTREPGGSPGAEAVRHVLLSGAAES 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL G I+LCDRFLDSS YQG + + F+++LQ Sbjct: 64 FGVRMEAILFAAARNDHVEEVIRPALERGAIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ V+P+ T+I D+ + GL R + R E A D FE++++ HEKRR+ +LDIA Sbjct: 124 RVAIDGVVPELTLIFDIAAEKGLARARKRAD--EGAAPDRFEKEEIETHEKRREAYLDIA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P RC IV++ V ++++ V L+++ Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214 >gi|239831999|ref|ZP_04680328.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301] gi|239824266|gb|EEQ95834.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301] Length = 218 Score = 211 bits (538), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL + L+ +D +TREPGG+P AEA RHV+LS +++ Sbjct: 6 SGLFITFEGGEGAGKSTQIALLAKHLRASGFDPVITREPGGSPGAEAIRHVILSGNAEKY 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+++LCDRF+DSS AYQG + ++ +++ Sbjct: 66 GPAMEALLFAAARADHVDQLIRPALDEGRVVLCDRFIDSSRAYQGVTGNLDSTYMSAVER 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ +MPD TIILD+P + GL R R R S D FE++D+ +HE RRQ FL IA Sbjct: 126 IAIDGIMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++ + ++A+ I + ++++R Sbjct: 183 AEPRRCKVIGADRPQDAIASEIAREIDSVLKER 215 >gi|23821779|sp|Q8UFA0|KTHY_AGRT5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 224 Score = 211 bits (536), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 103/213 (48%), Positives = 144/213 (67%), Gaps = 2/213 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFISFEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHV+LS + Sbjct: 4 KTGLFISFEGGEGAGKSTQIRTLAEALRGRGFEVVVTREPGGSPGAEAVRHVILSGAAES 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL G+I+LCDRFLDSS YQG + + F+++LQ Sbjct: 64 FGVRMEAILFAAARNDHVEEVIRPALARGEIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I++ V+P+ T+I D+ + GL R + R E A D FE++++ HEKRR+ +LDIA Sbjct: 124 RIAIDGVVPELTLIFDIAAEKGLARARKRAD--EGATPDRFEKEEIETHEKRREAYLDIA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P RC IV++ V ++++ V L+++ Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214 >gi|261754954|ref|ZP_05998663.1| thymidylate kinase [Brucella suis bv. 3 str. 686] gi|306843867|ref|ZP_07476462.1| thymidylate kinase [Brucella sp. BO1] gi|38258158|sp|Q8G0U3|KTHY_BRUSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|261744707|gb|EEY32633.1| thymidylate kinase [Brucella suis bv. 3 str. 686] gi|306275622|gb|EFM57346.1| thymidylate kinase [Brucella sp. BO1] Length = 214 Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|265984061|ref|ZP_06096796.1| thymidylate kinase [Brucella sp. 83/13] gi|306838352|ref|ZP_07471197.1| thymidylate kinase [Brucella sp. NF 2653] gi|264662653|gb|EEZ32914.1| thymidylate kinase [Brucella sp. 83/13] gi|306406492|gb|EFM62726.1| thymidylate kinase [Brucella sp. NF 2653] Length = 214 Score = 211 bits (536), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILAEK 211 >gi|163760148|ref|ZP_02167231.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43] gi|162282547|gb|EDQ32835.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43] Length = 226 Score = 210 bits (535), Expect = 9e-53, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+FEG EG GK+T I+ L + L+R+ DV VTREPGG+ AEA RHVLLS +E Sbjct: 4 SKGRFITFEGGEGVGKSTQINRLAKVLRRRGMDVLVTREPGGSLGAEAVRHVLLSGAAEE 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EA++FAAAR DHVE VIRPAL EG I+LCDR++DSS YQG + + F+ +L+ Sbjct: 64 FGIRMEAMLFAAARSDHVEEVIRPALAEGAIVLCDRYMDSSRVYQGVTGNLEPQFIVNLE 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+V ++PD T+ILDLP + GL+R + R + D FE+++V HEKRR+ F+D+ Sbjct: 124 RIAVNSMVPDLTLILDLPAEAGLRRAKARVGA--NVAPDRFEKEEVATHEKRREAFIDLT 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R++P+RC ++++ VA +L+ V +++ Sbjct: 182 RSEPERCKLINADQPEDMVALAVLSTVEPVLE 213 >gi|163843261|ref|YP_001627665.1| thymidylate kinase [Brucella suis ATCC 23445] gi|189028829|sp|B0CGE4|KTHY_BRUSI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|163673984|gb|ABY38095.1| thymidylate kinase [Brucella suis ATCC 23445] Length = 214 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKLIDADRSQEKIADEIRSVVDTILTEK 211 >gi|110633933|ref|YP_674141.1| thymidylate kinase [Mesorhizobium sp. BNC1] gi|123162339|sp|Q11HZ9|KTHY_MESSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110284917|gb|ABG62976.1| thymidylate kinase [Chelativorans sp. BNC1] Length = 225 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 105/214 (49%), Positives = 142/214 (66%), Gaps = 3/214 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I LL L+R+ DV TREPGG+P AEA RHVLLS + FG Sbjct: 5 GFFITFEGGEGAGKSTQIHLLADRLRREGRDVLTTREPGGSPGAEAIRHVLLSGAAEPFG 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EAI+FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+ +L+ + Sbjct: 65 ATLEAILFAAARSDHVEQVIRPAVESGAIVLCDRFLDSSRVYQGVTGGLASDFMAALERV 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V ++PD T+ILD+ + GL+R R R A D FE++++ IH +RR+ FL+IA Sbjct: 125 TVNGLIPDLTVILDIDPEEGLRRASER---RGKATADRFEKENLEIHRRRREAFLNIAAR 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P RC ++D++ S +V+ N+ IV ++ R Sbjct: 182 EPQRCVVIDASRSADAVSENVTEIVLRVIFDRAG 215 >gi|319408563|emb|CBI82216.1| Thymidylate kinase [Bartonella schoenbuchensis R1] Length = 214 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 102/210 (48%), Positives = 142/210 (67%), Gaps = 2/210 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT ISLL ++L+ KNYDV +TREPGGT AEA R+VLLS +++ Sbjct: 2 SGYFITFEGGEGAGKTTQISLLAQYLRSKNYDVVITREPGGTAGAEAMRYVLLSGNTEQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA EA++F AAR+DHV VI P+L GKI+LCDRF+DS YQG + L L Sbjct: 62 GAFIEAVLFTAARVDHVSEVILPSLQAGKIILCDRFIDSMRVYQGLNNKVNSHLLSVLGR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I + VMP+ T +LD+P G++R R +E +DYFE+ + I E+RRQ FL +AR Sbjct: 122 IGLGTVMPNLTFLLDIPATFGMERTDLRR--KEIGKIDYFEKDQLNIQEQRRQAFLQLAR 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 N+P R ++D+ + +++A+ I +I +L+ Sbjct: 180 NEPFRFRVIDATCAVETIASQIKDICHQLI 209 >gi|161618946|ref|YP_001592833.1| thymidylate kinase [Brucella canis ATCC 23365] gi|260566467|ref|ZP_05836937.1| thymidylate kinase [Brucella suis bv. 4 str. 40] gi|189028828|sp|A9MB09|KTHY_BRUC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|161335757|gb|ABX62062.1| thymidylate kinase [Brucella canis ATCC 23365] gi|260155985|gb|EEW91065.1| thymidylate kinase [Brucella suis bv. 4 str. 40] Length = 214 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSGRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|17987272|ref|NP_539906.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|148558979|ref|YP_001258934.1| thymidylate kinase [Brucella ovis ATCC 25840] gi|189024159|ref|YP_001934927.1| Thymidylate kinase [Brucella abortus S19] gi|225627470|ref|ZP_03785507.1| thymidylate kinase [Brucella ceti str. Cudo] gi|225852497|ref|YP_002732730.1| thymidylate kinase [Brucella melitensis ATCC 23457] gi|237815418|ref|ZP_04594416.1| thymidylate kinase [Brucella abortus str. 2308 A] gi|260545335|ref|ZP_05821076.1| thymidylate kinase [Brucella abortus NCTC 8038] gi|260563999|ref|ZP_05834485.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|260754728|ref|ZP_05867076.1| dTMP kinase [Brucella abortus bv. 6 str. 870] gi|260757951|ref|ZP_05870299.1| dTMP kinase [Brucella abortus bv. 4 str. 292] gi|260883749|ref|ZP_05895363.1| thymidylate kinase [Brucella abortus bv. 9 str. C68] gi|261213980|ref|ZP_05928261.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya] gi|261222160|ref|ZP_05936441.1| thymidylate kinase [Brucella ceti B1/94] gi|261314279|ref|ZP_05953476.1| thymidylate kinase [Brucella pinnipedialis M163/99/10] gi|261325087|ref|ZP_05964284.1| thymidylate kinase [Brucella neotomae 5K33] gi|261752297|ref|ZP_05996006.1| thymidylate kinase [Brucella suis bv. 5 str. 513] gi|261758182|ref|ZP_06001891.1| thymidylate kinase [Brucella sp. F5/99] gi|265988662|ref|ZP_06101219.1| thymidylate kinase [Brucella pinnipedialis M292/94/1] gi|265991077|ref|ZP_06103634.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1] gi|265994912|ref|ZP_06107469.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether] gi|265998125|ref|ZP_06110682.1| thymidylate kinase [Brucella ceti M490/95/1] gi|265999472|ref|ZP_05466544.2| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9] gi|294852415|ref|ZP_06793088.1| thymidylate kinase [Brucella sp. NVSL 07-0026] gi|297248318|ref|ZP_06932036.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196] gi|23821787|sp|Q8YH15|KTHY_BRUME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221724|sp|A5VQD7|KTHY_BRUO2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238689366|sp|B2S5K6|KTHY_BRUA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808281|sp|C0RIW8|KTHY_BRUMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|17982949|gb|AAL52170.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|148370236|gb|ABQ60215.1| thymidylate kinase [Brucella ovis ATCC 25840] gi|189019731|gb|ACD72453.1| Thymidylate kinase [Brucella abortus S19] gi|225617475|gb|EEH14520.1| thymidylate kinase [Brucella ceti str. Cudo] gi|225640862|gb|ACO00776.1| thymidylate kinase [Brucella melitensis ATCC 23457] gi|237790255|gb|EEP64465.1| thymidylate kinase [Brucella abortus str. 2308 A] gi|260096742|gb|EEW80617.1| thymidylate kinase [Brucella abortus NCTC 8038] gi|260154015|gb|EEW89107.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|260668269|gb|EEX55209.1| dTMP kinase [Brucella abortus bv. 4 str. 292] gi|260674836|gb|EEX61657.1| dTMP kinase [Brucella abortus bv. 6 str. 870] gi|260873277|gb|EEX80346.1| thymidylate kinase [Brucella abortus bv. 9 str. C68] gi|260915587|gb|EEX82448.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya] gi|260920744|gb|EEX87397.1| thymidylate kinase [Brucella ceti B1/94] gi|261301067|gb|EEY04564.1| thymidylate kinase [Brucella neotomae 5K33] gi|261303305|gb|EEY06802.1| thymidylate kinase [Brucella pinnipedialis M163/99/10] gi|261738166|gb|EEY26162.1| thymidylate kinase [Brucella sp. F5/99] gi|261742050|gb|EEY29976.1| thymidylate kinase [Brucella suis bv. 5 str. 513] gi|262552593|gb|EEZ08583.1| thymidylate kinase [Brucella ceti M490/95/1] gi|262766025|gb|EEZ11814.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether] gi|263001861|gb|EEZ14436.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1] gi|263094155|gb|EEZ18077.1| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9] gi|264660859|gb|EEZ31120.1| thymidylate kinase [Brucella pinnipedialis M292/94/1] gi|294821004|gb|EFG38003.1| thymidylate kinase [Brucella sp. NVSL 07-0026] gi|297175487|gb|EFH34834.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196] gi|326409013|gb|ADZ66078.1| Thymidylate kinase [Brucella melitensis M28] gi|326538723|gb|ADZ86938.1| thymidylate kinase [Brucella melitensis M5-90] Length = 214 Score = 209 bits (532), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|261317627|ref|ZP_05956824.1| thymidylate kinase [Brucella pinnipedialis B2/94] gi|261296850|gb|EEY00347.1| thymidylate kinase [Brucella pinnipedialis B2/94] Length = 214 Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|261218666|ref|ZP_05932947.1| thymidylate kinase [Brucella ceti M13/05/1] gi|261321836|ref|ZP_05961033.1| thymidylate kinase [Brucella ceti M644/93/1] gi|260923755|gb|EEX90323.1| thymidylate kinase [Brucella ceti M13/05/1] gi|261294526|gb|EEX98022.1| thymidylate kinase [Brucella ceti M644/93/1] Length = 214 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + + I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKITDEIRSVVDTILTEK 211 >gi|260761774|ref|ZP_05874117.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59] gi|260672206|gb|EEX59027.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59] Length = 214 Score = 207 bits (528), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AE RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|23501873|ref|NP_698000.1| thymidylate kinase [Brucella suis 1330] gi|254704286|ref|ZP_05166114.1| thymidylate kinase [Brucella suis bv. 3 str. 686] gi|23347812|gb|AAN29915.1| thymidylate kinase [Brucella suis 1330] Length = 211 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|254719070|ref|ZP_05180881.1| thymidylate kinase [Brucella sp. 83/13] gi|306840480|ref|ZP_07473239.1| thymidylate kinase [Brucella sp. BO2] gi|306289495|gb|EFM60713.1| thymidylate kinase [Brucella sp. BO2] Length = 211 Score = 206 bits (524), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILAEK 208 >gi|62289916|ref|YP_221709.1| thymidylate kinase [Brucella abortus bv. 1 str. 9-941] gi|82699843|ref|YP_414417.1| thymidylate kinase [Brucella melitensis biovar Abortus 2308] gi|254689223|ref|ZP_05152477.1| thymidylate kinase [Brucella abortus bv. 6 str. 870] gi|254693708|ref|ZP_05155536.1| thymidylate kinase [Brucella abortus bv. 3 str. Tulya] gi|254701744|ref|ZP_05163572.1| thymidylate kinase [Brucella suis bv. 5 str. 513] gi|254706812|ref|ZP_05168640.1| thymidylate kinase [Brucella pinnipedialis M163/99/10] gi|254730256|ref|ZP_05188834.1| thymidylate kinase [Brucella abortus bv. 4 str. 292] gi|256031574|ref|ZP_05445188.1| thymidylate kinase [Brucella pinnipedialis M292/94/1] gi|256044653|ref|ZP_05447557.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1] gi|256061085|ref|ZP_05451240.1| thymidylate kinase [Brucella neotomae 5K33] gi|256113539|ref|ZP_05454365.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether] gi|256159712|ref|ZP_05457459.1| thymidylate kinase [Brucella ceti M490/95/1] gi|256254974|ref|ZP_05460510.1| thymidylate kinase [Brucella ceti B1/94] gi|256257473|ref|ZP_05463009.1| thymidylate kinase [Brucella abortus bv. 9 str. C68] gi|256369414|ref|YP_003106922.1| thymidylate kinase [Brucella microti CCM 4915] gi|260168705|ref|ZP_05755516.1| thymidylate kinase [Brucella sp. F5/99] gi|62196048|gb|AAX74348.1| Tmk, thymidylate kinase [Brucella abortus bv. 1 str. 9-941] gi|82615944|emb|CAJ10967.1| Thymidylate kinase:ATP/GTP-binding site motif A (P-loop) [Brucella melitensis biovar Abortus 2308] gi|255999574|gb|ACU47973.1| thymidylate kinase [Brucella microti CCM 4915] Length = 211 Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|254710078|ref|ZP_05171889.1| thymidylate kinase [Brucella pinnipedialis B2/94] Length = 211 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|254714079|ref|ZP_05175890.1| thymidylate kinase [Brucella ceti M644/93/1] gi|254716864|ref|ZP_05178675.1| thymidylate kinase [Brucella ceti M13/05/1] Length = 211 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + + I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKITDEIRSVVDTILTEK 208 >gi|254697358|ref|ZP_05159186.1| thymidylate kinase [Brucella abortus bv. 2 str. 86/8/59] Length = 211 Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AE RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|319783485|ref|YP_004142961.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169373|gb|ADV12911.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 231 Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 99/200 (49%), Positives = 134/200 (67%), Gaps = 2/200 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EGAGK+T I L R ++ K YDV +TREPGG+P AEA RHVLLS + Sbjct: 8 LARGFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 67 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG + EA++FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+D+L Sbjct: 68 PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMDAL 127 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++++ +MPD T+I D+ GL+R R A D FE++ + IH+ RR+ FL I Sbjct: 128 EQVAINGMMPDMTLIFDIDPAEGLRRATLRRGA--EAVADRFEKETLAIHQARREAFLAI 185 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 A+ +P+RC +VD+A +V Sbjct: 186 AKAEPERCIVVDAAAEPDAV 205 >gi|163868322|ref|YP_001609531.1| thymidylate kinase [Bartonella tribocorum CIP 105476] gi|161017978|emb|CAK01536.1| Thymidylate kinase [Bartonella tribocorum CIP 105476] Length = 214 Score = 196 bits (499), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 2/215 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG +G GKT ISLL +L + YDV TREPGGT AEA RH+LLS V ++ Sbjct: 2 SGYFITFEGGDGVGKTVQISLLAEYLSHQGYDVVTTREPGGTAGAEAIRHILLSGKVQQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++F AAR DHV +I P+L +GKI+LCDRF+DS+ YQG + L L+ Sbjct: 62 GPLIEAVLFTAARTDHVAEIIAPSLQKGKIVLCDRFIDSTRVYQGLNERVNSSLLSVLEC 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ +MP T +LD+P G+KR R E +DYFE+K + I E+RRQ FL +A+ Sbjct: 122 IALNGIMPHLTFLLDMPAACGIKRANLRRKKTEE--IDYFEKKPLEIQEQRRQAFLQLAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P R ++D+ S + +A I NI +++ ++S Sbjct: 180 QEPHRFRVIDATGSVEVIAHQIKNICHQVLLDKLS 214 >gi|121602268|ref|YP_989111.1| thymidylate kinase [Bartonella bacilliformis KC583] gi|120614445|gb|ABM45046.1| thymidylate kinase [Bartonella bacilliformis KC583] Length = 213 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG GKTT ISLL + + K Y+V +TREPGGT AE R++LLS ++G Sbjct: 2 GYFITFEGGEGVGKTTQISLLAHYFRSKGYEVVITREPGGTAGAEIIRYILLSGSAIQYG 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA++F AAR DHV VI+PAL GKI+LCDRF+DS+ YQG + L L+ I Sbjct: 62 SFIEAVLFTAARADHVAEVIKPALQAGKIVLCDRFIDSTRVYQGLNNKVDSYLLSILECI 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + VMP+ T +LD+P ++RV+ R +ES +D+FE+ ++ I E+RRQ FL +A+N Sbjct: 122 GINGVMPNLTFLLDVPAISSMERVKLRR--KESGIIDHFEKDELKIQEQRRQAFLQLAKN 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R ++D+ + + +A I +I +++ Sbjct: 180 EPNRIQVIDATGTVEEIACQIKDICHQVI 208 >gi|319407218|emb|CBI80857.1| Thymidylate kinase [Bartonella sp. 1-1C] Length = 213 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 96/210 (45%), Positives = 137/210 (65%), Gaps = 2/210 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT AEA R++LLS V ++ Sbjct: 2 SGYFITFEGGEGVGKTTQISLLSQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E +F AAR DHV +I P+L GKI+LCDRF+DS+ YQG + L+ Sbjct: 62 GPFIETFLFTAARADHVSEIIIPSLQAGKIVLCDRFIDSTRVYQGINNKVDAHIFSILEH 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ + PD T +LD+P +G++RV R E +DYFE+ D+ I E+RRQ FL++A+ Sbjct: 122 IGMKGIKPDLTFLLDIPTKLGIERVNLRRKRIEK--IDYFEKDDLAIQEQRRQAFLELAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++P R ++D + + +A I +I +L+ Sbjct: 180 HEPHRFQVIDGTCAVEVIADQIKDICHQLL 209 >gi|240850633|ref|YP_002972033.1| thymidylate kinase [Bartonella grahamii as4aup] gi|240267756|gb|ACS51344.1| thymidylate kinase [Bartonella grahamii as4aup] Length = 214 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 2/215 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG +G GKT ISLL L + YDV TREPGGT AEA RH+LLS ++ Sbjct: 2 SGYFITFEGGDGVGKTVQISLLAESLSHQGYDVVTTREPGGTLGAEAIRHILLSGQAQQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++F AAR+DHV VI P+L +GKI+LCDRF+DS+ YQG D+ L L+ Sbjct: 62 GPLIEAVLFTAARVDHVTEVIAPSLQKGKIVLCDRFIDSTRVYQGLNDTVSSSLLAVLEC 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ ++P T +LD+P G+KR R +E+ +DYFE+ + + E+RRQ FL +A+ Sbjct: 122 IALNGILPHLTFLLDMPAMCGMKRANLRR--KETEEIDYFEKDQLEVQEQRRQAFLQLAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P R ++D+ S ++VA I NI +++ ++S Sbjct: 180 QEPHRFRVIDATGSVEAVAHQIKNICHQVLLDKLS 214 >gi|319405648|emb|CBI79271.1| Thymidylate kinase [Bartonella sp. AR 15-3] Length = 210 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 95/205 (46%), Positives = 133/205 (64%), Gaps = 5/205 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT ISLL + L RK YDV +TREPGGT AEA R++LLS V E+ Sbjct: 2 SGYFITFEGGEGAGKTTQISLLAQHLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAEY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E +F AAR DHV +I+P+L GKI+LCDRF+DS+ YQG + L+ Sbjct: 62 GPFIETFLFTAARADHVSEIIKPSLQAGKIVLCDRFIDSTRVYQGLDNKVDAHIFSILEH 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ + PD T +LD+P +G++RV R +DYFE+ + + E+RRQ FL++A+ Sbjct: 122 IGMKGIKPDLTFLLDIPAKLGMERVNLR-----RKKIDYFEKASLALQEQRRQAFLELAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNI 207 ++P R ++D S + +A I +I Sbjct: 177 HEPHRFQVIDGTCSVEVIADQIKDI 201 >gi|49474220|ref|YP_032262.1| thymidylate kinase [Bartonella quintana str. Toulouse] gi|59798258|sp|Q6FZU8|KTHY_BARQU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49239724|emb|CAF26103.1| Thymidylate kinase [Bartonella quintana str. Toulouse] Length = 214 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 139/214 (64%), Gaps = 2/214 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG GKTT ISLL ++L+ + YDV TREPGGT AEA RH+LLS + Sbjct: 2 SGYFITFEGGEGVGKTTQISLLAQYLRNQGYDVLTTREPGGTVGAEAIRHILLSGQAQNY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E I+ AAR+DH+ VI P+L +GKI+LCDRF+DS+ YQG ++ L L+ Sbjct: 62 GPLIEVILLTAARIDHITEVIAPSLQKGKIVLCDRFIDSTRVYQGLNNTVGSSVLSVLEY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ +MP T +LD+P G++R R +++ +DYFE+ ++ I E+RRQ FL +A+ Sbjct: 122 VALNGIMPCLTFLLDIPARCGMERANLRR--KKAETIDYFEKDELKIQEQRRQAFLQLAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P R ++D+ + + +A I NI +++ +V Sbjct: 180 QEPHRFRVIDATGAMEVIAQQIKNICHQVILDQV 213 >gi|319404208|emb|CBI77801.1| Thymidylate kinase [Bartonella rochalimae ATCC BAA-1498] Length = 217 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 8/215 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT AEA R++LLS V ++ Sbjct: 2 SGYFITFEGGEGVGKTTQISLLAQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-----SQHLFL 117 G E +F AAR DHV +I P+L GKI+LCDRF+DS+ YQG H+F Sbjct: 62 GPFIETFLFTAARADHVSEIIMPSLQAGKIVLCDRFIDSTRVYQGINKGINNRVDAHIF- 120 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L+ I ++ + PD T +LD+P +G++RV R E +DYFE+ D+ I E+RRQ F Sbjct: 121 SILEHIGMKGIKPDLTFLLDIPAKLGIERVNLRRKKIEK--IDYFEKDDLAIQEQRRQAF 178 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L++A+++P R ++D + + +A I +I +L+ Sbjct: 179 LELAKHEPYRFQVIDGTCAVEVIADQIKDICHQLL 213 >gi|146340769|ref|YP_001205817.1| thymidylate kinase [Bradyrhizobium sp. ORS278] gi|166221723|sp|A4YUL6|KTHY_BRASO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146193575|emb|CAL77592.1| thymidylate kinase [Bradyrhizobium sp. ORS278] Length = 226 Score = 191 bits (486), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 139/213 (65%), Gaps = 7/213 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F++FEG EGAGK+T I +L L++ V +TREPGG+P AE RH++LS G Sbjct: 13 GRFVTFEGGEGAGKSTQIKMLADRLEKDGVRVVLTREPGGSPGAEIMRHLVLSGMGKLLG 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEAE ++FAAAR DHV NVI PAL +G +LCDRF DS+ AYQG + L+++Q + Sbjct: 73 AEAETLLFAAARDDHVRNVILPALNQGSWVLCDRFFDSTRAYQGSQGKVAPDVLNAMQRV 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ ++ PD T+ILD+PV++GL+R R R S D FE +D+ H+ R F IA Sbjct: 133 TIGDLKPDLTLILDVPVEVGLQRASAR---RGSGAPDRFESEDIKFHKGLRDAFHKIAAT 189 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P RC ++D+ S ++V+ NIVW+ V++R+ Sbjct: 190 EPRRCVLIDATASAEAVS----NIVWDAVRERL 218 >gi|307942275|ref|ZP_07657626.1| thymidylate kinase [Roseibium sp. TrichSKD4] gi|307774561|gb|EFO33771.1| thymidylate kinase [Roseibium sp. TrichSKD4] Length = 229 Score = 190 bits (482), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 97/206 (47%), Positives = 128/206 (62%), Gaps = 1/206 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG EGAGKTT I+ LK+ L+ + +TREPGG+P AE R +LLS + Sbjct: 2 TGQFITFEGGEGAGKTTQIARLKQRLEELGKTICLTREPGGSPGAEKIREMLLSGAARKL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ VI PAL+ G ++CDRF DS+ YQGE LD L+ Sbjct: 62 GPRGEAMLFAAARADHVDGVIAPALVRGDWVICDRFADSTRVYQGEAGVDNET-LDLLET 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+V PD TI++D+P DIGL RV +R +S D FE + HE+RR +FLD+A+ Sbjct: 121 IAVAGTRPDLTILIDIPADIGLSRVSSRSKTDDSGGPDRFEADTIATHERRRSLFLDLAK 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 QP+R +VD H VA I V Sbjct: 181 QQPERFVVVDGRHDPDHVAGEIWWAV 206 >gi|319898926|ref|YP_004159019.1| Thymidylate kinase [Bartonella clarridgeiae 73] gi|319402890|emb|CBI76441.1| Thymidylate kinase [Bartonella clarridgeiae 73] Length = 210 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 94/210 (44%), Positives = 138/210 (65%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT ISLL + L K YDV +TREPGGT AEA R++LLS V ++ Sbjct: 2 SGYFITFEGGEGAGKTTQISLLAQHLGSKGYDVIITREPGGTVGAEAIRYILLSGSVAQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E ++F AAR DHV +I+P+L GKI+LCDRF+DS+ YQG + L L+ Sbjct: 62 GPFIETVLFTAARADHVAEIIKPSLQAGKIVLCDRFIDSTRVYQGINNKVDTHILSILEY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ + PD T +LD+P G++R+ +LR ++YFE+ D+ I E+RRQ FL++A+ Sbjct: 122 IGMKGIKPDLTFLLDIPAKFGIERI----NLRRKK-INYFEKDDLDIQEQRRQAFLELAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++P R ++D + + +A I +I ++ Sbjct: 177 HEPHRFQVIDGTCAVEVIADQIKDICHRVI 206 >gi|114704619|ref|ZP_01437527.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506] gi|114539404|gb|EAU42524.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506] Length = 226 Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 93/203 (45%), Positives = 132/203 (65%), Gaps = 3/203 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG +G+GKTT + L + L+ +DV TREPGGTP A+A RHV+LS +F Sbjct: 2 AGKFITFEGGDGSGKTTQVLRLAKMLREYGFDVVTTREPGGTPGADAIRHVVLSGAARDF 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DH++ VIRPAL EG I++CDRF DS+ YQ FLD L+ Sbjct: 62 GPNIEAVLFAAARADHLDKVIRPALEEGAIVICDRFHDSTRVYQAATKDLDLAFLDRLET 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ V PD TIILD+P ++G +R + R S E+ D FE + +H +RR+ FL IA Sbjct: 122 ATLDGVAPDLTIILDVPAELGYERAKARRSEAEA---DRFESDALDVHAERRERFLAIAE 178 Query: 183 NQPDRCHIVDSAHSFQSVATNIL 205 ++PDRC ++D + +A +I+ Sbjct: 179 DEPDRCVVIDGRGEEEEIAEDIV 201 >gi|118589860|ref|ZP_01547264.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614] gi|118437357|gb|EAV43994.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614] Length = 241 Score = 188 bits (477), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 135/215 (62%), Gaps = 5/215 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGK+T I+ LK +L+ V VTREPGG+P AE R +LLS G + Sbjct: 15 SGHFITFEGGEGAGKSTQIARLKTYLEGMGQSVVVTREPGGSPGAEKIRTMLLSGGAKDL 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ I+PAL G +LCDR+ DS++ YQGE + +L L+ Sbjct: 75 GPRGEAMLFAAARADHVDTTIKPALERGDWVLCDRYADSTWVYQGEAGVDRE-YLKLLET 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +V V PD TI++D+PV+IGL RV R S D FE +D+ +H++RR++FL++A+ Sbjct: 134 AAVAGVYPDLTILIDVPVEIGLGRVAERSRTDNSGGPDRFEDEDLKVHQRRRELFLELAK 193 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + R ++D + VA I E VQK S Sbjct: 194 IESFRFAVIDGSKGLDEVAAAIR----EAVQKTFS 224 >gi|158423797|ref|YP_001525089.1| thymidylate kinase [Azorhizobium caulinodans ORS 571] gi|158330686|dbj|BAF88171.1| thymidylate kinase [Azorhizobium caulinodans ORS 571] Length = 235 Score = 186 bits (472), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 98/223 (43%), Positives = 136/223 (60%), Gaps = 13/223 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GK+T L LQ+ +V +TREPGG+ AEA RHVLLS +FG Sbjct: 6 GRFITLEGGEGTGKSTQARRLAAALQKGGLEVVLTREPGGSAGAEAVRHVLLSGAAKDFG 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA++FAAAR DHV+++IRPAL GK ++CDRF+DS+ YQG + LDSL+ + Sbjct: 66 PQGEALLFAAARADHVDSLIRPALAAGKWVICDRFIDSTRVYQGAVGAVPGALLDSLEWV 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + E PD T++LD+P ++GL R R E A D FE + + H + R FL +A+ Sbjct: 126 AAAEARPDLTLVLDVPPEVGLSRAAGRG---EGA--DRFESEGLAFHTRVRDAFLALAKA 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV----SPLSSK 222 P RC IVD++ VA +VW V++R+ PLS+K Sbjct: 181 DPARCVIVDASGGPDDVAA----LVWSSVRERLVPPERPLSAK 219 >gi|13470654|ref|NP_102223.1| thymidylate kinase [Mesorhizobium loti MAFF303099] gi|23821805|sp|Q98MV4|KTHY_RHILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|14021396|dbj|BAB48009.1| thymidylate kinase [Mesorhizobium loti MAFF303099] Length = 224 Score = 186 bits (471), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/216 (46%), Positives = 136/216 (62%), Gaps = 2/216 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T I L R + K YDV +TREPGG+P AEA RHVLLS + Sbjct: 1 MARGFFITFEGGEGAGKSTQIERLARKMHAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG + EA++FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+ +L Sbjct: 61 PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++I++ +MPD T+I D+ GL+R R A D FE++ + IH+ RR FL I Sbjct: 121 EQIAINGMMPDMTLIFDIDPAEGLRRATLRRG--SDAGADRFEKETLAIHQARRAAFLAI 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A +P+RC +VD++ +V + V+ ++ R Sbjct: 179 AAAEPERCIVVDASADPNTVEDVVTAAVFAALEARA 214 >gi|260459470|ref|ZP_05807725.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075] gi|259035024|gb|EEW36280.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075] Length = 248 Score = 183 bits (465), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I L R ++ K YDV +TREPGG+P AEA RHVLLS + FG Sbjct: 28 GFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAEPFG 87 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA++FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+ +L+++ Sbjct: 88 PKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATLEQV 147 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ +MPD T+I D+ GL+R R + A D FE++ + IH+ RR FL IA Sbjct: 148 AINGMMPDMTLIFDIDPAEGLRRATLRRGSDDGA--DRFEKETLAIHQARRAAFLAIAAA 205 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+RC +VD++ +V + V+ ++ R Sbjct: 206 EPERCIVVDASAKPDTVEDVVTAAVFAALEARA 238 >gi|49475610|ref|YP_033651.1| thymidylate kinase [Bartonella henselae str. Houston-1] gi|59798266|sp|Q6G5D6|KTHY_BARHE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49238417|emb|CAF27644.1| Thymidylate kinase [Bartonella henselae str. Houston-1] Length = 215 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 95/207 (45%), Positives = 131/207 (63%), Gaps = 5/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 SG FI+FEG EG GKTT I LL + L K YDV TREPGGT AE RH+LLS V + Sbjct: 2 SGYFITFEGGEGVGKTTQIFLLAQHLYGKGYDVLTTREPGGTAGAEVIRHILLSGQVQQH 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G EAI+F AAR+DHV VI P+L +GK++LCDRF+DS+ YQG D L L+ Sbjct: 62 YGPLIEAILFTAARIDHVSEVIMPSLQKGKVVLCDRFIDSTRVYQGLNDKVSSSTLAVLE 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI 180 +++ ++ P T +LD+P +KR R RE A +DYFE+ ++ I E+RRQ FL + Sbjct: 122 CLALNKIKPQITFLLDIPARCSMKRANLR---REKAETIDYFEKDELKIQEQRRQAFLQL 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 A+ +P R ++D + + +A I +I Sbjct: 179 AKQEPHRFRVIDGTDTVEVIAQQIRDI 205 >gi|90417679|ref|ZP_01225591.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1] gi|90337351|gb|EAS51002.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1] Length = 222 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/202 (44%), Positives = 133/202 (65%), Gaps = 3/202 (1%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++FEG EG+GKTT I+ L L+ + +DV TREPGG+P A+A RHV+LS + G E Sbjct: 1 MTFEGGEGSGKTTQIARLAGHLRSEGHDVVTTREPGGSPGADALRHVILSGAAEGLGVEV 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 EA++FAAAR DHV+ +IRPAL GKI+LCDRF DS+ YQ + D+++ ++ Sbjct: 61 EAMLFAAARADHVDTLIRPALDAGKIVLCDRFHDSTRVYQFLDSELDQDYRDAMERAALG 120 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 +++P+ TIILD+P +G++R + R R D FE++D +HE+RRQ F +A ++P+ Sbjct: 121 DLLPNLTIILDVPASVGVERARQR---RADHSPDRFEKEDEALHERRRQAFRKLAEDEPE 177 Query: 187 RCHIVDSAHSFQSVATNILNIV 208 RC IVD + VA I +++ Sbjct: 178 RCVIVDGTQAEDKVAAEIRDLI 199 >gi|90424201|ref|YP_532571.1| thymidylate kinase [Rhodopseudomonas palustris BisB18] gi|122476154|sp|Q214D4|KTHY_RHOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|90106215|gb|ABD88252.1| thymidylate kinase [Rhodopseudomonas palustris BisB18] Length = 230 Score = 182 bits (461), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 135/215 (62%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G FI+FEG EGAGK+T I LL L +TREPGG+P AE RH++LS G+ Sbjct: 13 GRFITFEGGEGAGKSTQIKLLAERLNAGRIRCVLTREPGGSPGAEIIRHMILS-GIGSLI 71 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G EAE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG+ + L+++Q Sbjct: 72 GGTEAETLLFAAARDDHVHTVIEPALAQGSWVLCDRFTDSTRAYQGQMGAVAPALLNAMQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ ++ PD TIILD+PV+IG+KR + R R +A D FE + + H K R+ + IA Sbjct: 132 RVTIGDLKPDLTIILDVPVEIGVKRARLR---RGAAEPDRFEAESLEFHRKLREAYRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 ++P RC ++D+ + VA VW VQKR+ Sbjct: 189 ADEPQRCVLIDANAKVKPVAAK----VWAAVQKRL 219 >gi|192291490|ref|YP_001992095.1| thymidylate kinase [Rhodopseudomonas palustris TIE-1] gi|238692602|sp|B3QKH1|KTHY_RHOPT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|192285239|gb|ACF01620.1| dTMP kinase [Rhodopseudomonas palustris TIE-1] Length = 230 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 138/215 (64%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G FI+FEG EGAGK+T I LL + L++ VTREPGG+P AEA R LL+ G+ + Sbjct: 13 GRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLA-GIGKLI 71 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 GA+AEA++FAAAR DHV +I PAL G+ +LCDRF DS+ AYQG+ + L++LQ Sbjct: 72 GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ ++ PD T+ILD+PV+IGL R R R S D FE + + H R++F IA Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+RC ++D+ + VA I W+ V+ R+ Sbjct: 189 AQEPERCALIDANAEPEEVADRI----WQAVRLRL 219 >gi|316934063|ref|YP_004109045.1| thymidylate kinase [Rhodopseudomonas palustris DX-1] gi|315601777|gb|ADU44312.1| thymidylate kinase [Rhodopseudomonas palustris DX-1] Length = 230 Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G FI+FEG EGAGK+T I LL + L++ VTREPGG+P AEA R LL+ G+ + Sbjct: 13 GRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLA-GIGKLI 71 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 GA+AEA++FAAAR DHV +I PAL G+ +LCDRF DS+ AYQG+ + + L++LQ Sbjct: 72 GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVRLELLEALQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ ++ PD T+ILD+PV+IGL R R R S D FE + + H R++F IA Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+RC ++D+ + VA VW+ V+ R+ Sbjct: 189 AQEPERCVLIDANAEPEEVADR----VWQAVRLRL 219 >gi|39935842|ref|NP_948118.1| thymidylate kinase [Rhodopseudomonas palustris CGA009] gi|81562489|sp|Q6N643|KTHY_RHOPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|39649696|emb|CAE28217.1| thymidylate kinase [Rhodopseudomonas palustris CGA009] Length = 230 Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 138/215 (64%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G FI+FEG EGAGK+T I LL + L++ VTREPGG+P AEA R LL+ G+ + Sbjct: 13 GRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLA-GIGKLI 71 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 GA+AEA++FAAAR DHV +I PAL G+ +LCDRF DS+ AYQG+ + L++LQ Sbjct: 72 GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ ++ PD T+ILD+PV+IGL R R R S D FE + + H R++F IA Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+RC ++D+ + VA I W+ V+ R+ Sbjct: 189 AQEPERCVLIDANAEPEEVADRI----WQAVRLRL 219 >gi|92117540|ref|YP_577269.1| thymidylate kinase [Nitrobacter hamburgensis X14] gi|122417817|sp|Q1QLT8|KTHY_NITHX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91800434|gb|ABE62809.1| thymidylate kinase [Nitrobacter hamburgensis X14] Length = 230 Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 7/213 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GK+T I++L L VTREPGG+P AE RH++LS G Sbjct: 13 GRFITFEGGEGSGKSTQINILAERLNAAKLRAIVTREPGGSPGAEIIRHLVLSGMGKLLG 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AE ++FAAAR DHV VI+PAL +G +LCDRF DS+ AYQG L++L+ + Sbjct: 73 AYAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRAYQGRLGDVLPGVLNALERV 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ ++ PD T+ILD+PV+IG++R R R S D FE +DV H+K R + DIA + Sbjct: 133 TIGDLKPDLTVILDVPVEIGMQRAAVR---RGSGAPDRFEAEDVAFHQKLRDAYRDIAAS 189 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 P RC ++D+ +VA VW ++ RV Sbjct: 190 DPQRCVVIDANADVNTVAAG----VWAALRDRV 218 >gi|115524871|ref|YP_781782.1| thymidylate kinase [Rhodopseudomonas palustris BisA53] gi|115518818|gb|ABJ06802.1| thymidylate kinase [Rhodopseudomonas palustris BisA53] Length = 229 Score = 177 bits (450), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G FISFEG EGAGK+T I LL + L+R +TREPGG+P AE RH+LLS G+ Sbjct: 12 GRFISFEGGEGAGKSTQIKLLAQRLERAGLRTKITREPGGSPGAEIIRHLLLS-GIGSLI 70 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 GA AE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG + L++L+ Sbjct: 71 GGASAETVLFAAARDDHVHTVIAPALAQGTWVLCDRFSDSTRAYQGRLGAVPPALLNALE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ + PD T+ILD+PV+ G++R R R A D FE + + H R+ + IA Sbjct: 131 RVTIDGLKPDLTLILDVPVETGVRRAAVR---RGDATPDRFEAEGLEFHRGLREAYRQIA 187 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P RC ++D+ + ++VA VW V++R+ Sbjct: 188 ADNPQRCVLIDADAALETVAER----VWNAVRQRL 218 >gi|295689513|ref|YP_003593206.1| thymidylate kinase [Caulobacter segnis ATCC 21756] gi|295431416|gb|ADG10588.1| thymidylate kinase [Caulobacter segnis ATCC 21756] Length = 208 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEG EGAGK+T I L LQ +DV VTREPGG+P AEA R +L++ D Sbjct: 1 MTQGFFISFEGGEGAGKSTQIRRLAERLQAAGHDVVVTREPGGSPGAEAIRELLVNGAAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR DHVE VIRPAL G ++LCDRF DS+ AYQG + + SL Sbjct: 61 RWSPVTETLLMYAARRDHVERVIRPALARGAVVLCDRFADSTRAYQGAGGDAPASLIASL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + +PD T+ILDLP +IGL+R + R FE K + HE+ R +L+I Sbjct: 121 EDHVLSGTVPDLTLILDLPAEIGLERAEAR------GGAARFESKGLAFHERLRAGYLEI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 AR +P+RC ++++ +V I V + +++ Sbjct: 175 ARREPERCVVIEANADIDAVTAAISRTVDQRLER 208 >gi|163853588|ref|YP_001641631.1| dTMP kinase [Methylobacterium extorquens PA1] gi|163665193|gb|ABY32560.1| dTMP kinase [Methylobacterium extorquens PA1] Length = 244 Score = 177 bits (450), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 93/210 (44%), Positives = 131/210 (62%), Gaps = 7/210 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL + Sbjct: 8 GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AEA++FAAAR+DH+EN+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 68 GPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++++++ PD T+ILDLP + GL R + R + + D FE + + HE+ R F IA Sbjct: 128 VTLEDLRPDLTLILDLPPEAGLARARRRGAGEPA---DRFEAEGMRFHERLRTAFRSIAE 184 Query: 183 NQPDRCHIVDSAHSFQSVATNI---LNIVW 209 +P+RC ++D+ +V T I + + W Sbjct: 185 AEPERCRVIDADLGLDAVETAIAAAIAVRW 214 >gi|296445855|ref|ZP_06887807.1| thymidylate kinase [Methylosinus trichosporium OB3b] gi|296256683|gb|EFH03758.1| thymidylate kinase [Methylosinus trichosporium OB3b] Length = 238 Score = 177 bits (449), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 91/207 (43%), Positives = 126/207 (60%), Gaps = 2/207 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+ EG EGAGK+T + LL+ L + + TREPGG+P AEA R LL Sbjct: 16 HPGRFITLEGGEGAGKSTQMRLLQERLAERGVEAIATREPGGSPHAEALREALLGGKAAP 75 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G EAI+F+AAR+DH++ +I+PAL G ++CDRF DS+ AYQG R + L+ Sbjct: 76 LGPLGEAILFSAARIDHLDRLIKPALARGAWVICDRFADSTRAYQGARGGVDARLITLLE 135 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ PD TIILD+P +IGL+R R ES D FER+ + HE R+ FLDIA Sbjct: 136 RVALLGAKPDLTIILDIPAEIGLERASRRRRPDESP--DRFEREGLAFHEGLRRAFLDIA 193 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+RC +VD+ + VA I +IV Sbjct: 194 AGEPERCCVVDARAPEREVAQAIWHIV 220 >gi|240141008|ref|YP_002965488.1| thymidylate kinase [Methylobacterium extorquens AM1] gi|240010985|gb|ACS42211.1| thymidylate kinase [Methylobacterium extorquens AM1] Length = 249 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/206 (44%), Positives = 128/206 (62%), Gaps = 4/206 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL + Sbjct: 8 GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AEA++FAAAR+DH+ N+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 68 GPFAEALMFAAARIDHIGNLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++++++ PD T+ILDLP + GL R + R + D FE + + HE+ R F IA Sbjct: 128 VTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIAE 184 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 +P+RC ++D+ +V T I N + Sbjct: 185 AEPERCRVIDADLGPDAVETAIANAI 210 >gi|85715533|ref|ZP_01046514.1| thymidylate kinase [Nitrobacter sp. Nb-311A] gi|85697728|gb|EAQ35604.1| thymidylate kinase [Nitrobacter sp. Nb-311A] Length = 230 Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 136/214 (63%), Gaps = 9/214 (4%) Query: 4 GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EG+GK+T I +L +R L K + + VTREPGG+P AE RH++LS Sbjct: 13 GRFITFEGGEGSGKSTQIKILAERLLAAKQHAI-VTREPGGSPGAEIIRHLVLSGVGKLL 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G +AE ++FAAAR DHV VIRPAL +G +LCDRF DS+ YQG+ + L++++ Sbjct: 72 GVDAETLLFAAARDDHVRTVIRPALEQGVWVLCDRFADSTRVYQGQLGNVLPGVLNAMER 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ ++ PD T+ILD+PV++GL+R R R S D FE +D+ H K R + +IA Sbjct: 132 VTIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDLAFHRKLRDAYREIAA 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 N P RC ++D+ +VA I W +++R+ Sbjct: 189 NDPQRCVVIDADTDLDTVAARI----WAALRERM 218 >gi|328543898|ref|YP_004304007.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1] gi|326413642|gb|ADZ70705.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1] Length = 231 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 93/192 (48%), Positives = 123/192 (64%), Gaps = 2/192 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I L L DV VTREPGG+P AE R +LLS G G Sbjct: 3 GRFITFEGGEGAGKSTQIRRLHDRLAALGIDVVVTREPGGSPGAEFIRDLLLSGGARGLG 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAAAR DHV+ IRPAL GK +LCDRF DS+ YQGE HL L L+ Sbjct: 63 PRGEAMLFAAARADHVDATIRPALEAGKWVLCDRFADSTRVYQGEAGVDAHL-LGLLETA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ PD T+++D+P D+GLKRV R + D FE + + +HE+RR +FL++AR Sbjct: 122 ATLDLRPDLTVLIDVPADVGLKRVAARSRNAGADRGPDRFEDEALGVHERRRALFLELAR 181 Query: 183 NQPDRCHIVDSA 194 ++P+R IVD + Sbjct: 182 DEPERIRIVDGS 193 >gi|254469249|ref|ZP_05082654.1| thymidylate kinase [Pseudovibrio sp. JE062] gi|211961084|gb|EEA96279.1| thymidylate kinase [Pseudovibrio sp. JE062] Length = 227 Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 90/215 (41%), Positives = 132/215 (61%), Gaps = 5/215 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FISFEG EGAGK+T I L+ L K + TREPGG+ AE R VLLS ++ Sbjct: 2 SGIFISFEGGEGAGKSTQIQRLRDKLAAKGIEAVTTREPGGSQGAELVREVLLSGAAKDY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AEA++FAAAR DH++ +I+PAL GK +LCDRF DSS YQGE +++LQ+ Sbjct: 62 GVTAEAVLFAAARADHIDTLIKPALENGKWVLCDRFADSSRVYQGESGVPTPT-VEALQQ 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ P+ T+++++ ++GL RV R + E D FE + H +R+++FL++AR Sbjct: 121 VAIAGHNPNMTLLINVTPEVGLARVSKRTAPVEFDGPDRFETDTLETHRRRQELFLEMAR 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 N+PDR ++D V +I W VQ R + Sbjct: 181 NEPDRIVVIDGDQPQDKVTEDI----WRAVQDRFA 211 >gi|254503506|ref|ZP_05115657.1| thymidylate kinase [Labrenzia alexandrii DFL-11] gi|222439577|gb|EEE46256.1| thymidylate kinase [Labrenzia alexandrii DFL-11] Length = 224 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 1/214 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEG EGAGK+T I+ LK FL+ V VTREPGG+P AE R +LLS + G Sbjct: 3 GHFISFEGGEGAGKSTQIARLKAFLESLGKTVIVTREPGGSPGAEKIRAMLLSGEARDLG 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAAAR DHV+ +I+PAL G +LCDR+ DS+ YQGE + +L L+ Sbjct: 63 PRGEAMLFAAARADHVDTLIKPALDRGDWVLCDRYSDSTLVYQGEAGVDLN-YLRLLETA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V V P+ TI++D+P ++GL RVQ R S D FE + + +HE RR+ FLD+A Sbjct: 122 AVAGVRPELTILIDVPAELGLARVQERAKTDTSGGPDRFEGEALRVHEGRRKRFLDLAAE 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + R ++D + ++V+ +I + V Q +++ Sbjct: 182 EAYRFAVIDGSKDLEAVSASIQSAVEAAFQDQLT 215 >gi|27379629|ref|NP_771158.1| thymidylate kinase [Bradyrhizobium japonicum USDA 110] gi|46576547|sp|Q89LM5|KTHY_BRAJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|27352781|dbj|BAC49783.1| thymydilate kinase [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 93/215 (43%), Positives = 129/215 (60%), Gaps = 7/215 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG GK+T I L L+ VTREPGG+P AE RH++LS G Sbjct: 13 GRFITFEGGEGTGKSTQIKKLADRLKAARMRTLVTREPGGSPGAEIMRHLVLSGMGKLLG 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG S ++++Q + Sbjct: 73 PEAETLLFAAARDDHVHTVIEPALKQGIWVLCDRFADSTRAYQGSLGSVSPGLINAMQRV 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ ++ PD TIILDLPV+IGL+R R R S D FE + + H+ R+ + IA + Sbjct: 133 TIGDLKPDLTIILDLPVEIGLQRAAAR---RGSGTPDRFEGEQLSFHQGLREAYRKIAAD 189 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 +P RC ++D+ +VA VW ++ R+ P Sbjct: 190 EPARCVLIDANSDPDTVAGR----VWSALRDRLLP 220 >gi|16126067|ref|NP_420631.1| thymidylate kinase [Caulobacter crescentus CB15] gi|221234837|ref|YP_002517273.1| thymidylate kinase [Caulobacter crescentus NA1000] gi|10720067|sp|Q9RQJ9|KTHY_CAUCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|6318310|gb|AAF06831.1|AF099189_1 thymydilate kinase [Caulobacter crescentus CB15] gi|13423259|gb|AAK23799.1| thymidylate kinase [Caulobacter crescentus CB15] gi|220964009|gb|ACL95365.1| thymidylate kinase [Caulobacter crescentus NA1000] Length = 208 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 125/208 (60%), Gaps = 6/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEG EGAGK+T I L L+ +DV VTREPGG+P AEA R +L++ D Sbjct: 1 MTQGFFISFEGGEGAGKSTQIRRLADRLKAAGHDVIVTREPGGSPGAEAIRELLVNGAAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E+++ AAR DH+E VIRP L G ++LCDRF DS+ AYQG + + +L Sbjct: 61 RWSPVTESLLMYAARRDHIERVIRPGLARGAVVLCDRFADSTRAYQGAGGDAPASLIAAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E + +P T+ILDLP ++GL+R + R FE K + HE+ R +L+I Sbjct: 121 EEHVLGGTVPVLTLILDLPAEVGLQRAEARGGAAR------FESKGLAFHERLRAGYLEI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 AR +PDRC ++D+ +V I ++V Sbjct: 175 ARREPDRCVVIDADAELDAVTAAISDVV 202 >gi|159184784|ref|NP_354504.2| thymydilate kinase [Agrobacterium tumefaciens str. C58] gi|159140072|gb|AAK87289.2| thymydilate kinase [Agrobacterium tumefaciens str. C58] Length = 188 Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 85/178 (47%), Positives = 120/178 (67%), Gaps = 2/178 (1%) Query: 37 VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 VTREPGG+P AEA RHV+LS + FG EAI+FAAAR DHVE VIRPAL G+I+LCD Sbjct: 3 VTREPGGSPGAEAVRHVILSGAAESFGVRMEAILFAAARNDHVEEVIRPALARGEIVLCD 62 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 RFLDSS YQG + + F+++LQ I++ V+P+ T+I D+ + GL R + R E Sbjct: 63 RFLDSSRVYQGTTGNLEPDFIETLQRIAIDGVVPELTLIFDIAAEKGLARARKRAD--EG 120 Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A D FE++++ HEKRR+ +LDIA +P RC IV++ V ++++ V L+++ Sbjct: 121 ATPDRFEKEEIETHEKRREAYLDIALAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 178 >gi|254563522|ref|YP_003070617.1| thymidylate kinase [Methylobacterium extorquens DM4] gi|254270800|emb|CAX26805.1| thymidylate kinase [Methylobacterium extorquens DM4] Length = 244 Score = 174 bits (440), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 91/200 (45%), Positives = 126/200 (63%), Gaps = 4/200 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL + Sbjct: 8 GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AEA++FAAAR+DH+EN+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 68 GPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++++++ PD T+ILDLP + GL R + R + D FE + + HE+ R F IA Sbjct: 128 VTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRAAFRSIAE 184 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 +P+RC ++D+ +V T Sbjct: 185 AEPERCRVIDADLGPDAVET 204 >gi|148255489|ref|YP_001240074.1| thymidylate kinase [Bradyrhizobium sp. BTAi1] gi|166221722|sp|A5EJ24|KTHY_BRASB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146407662|gb|ABQ36168.1| thymidylate kinase [Bradyrhizobium sp. BTAi1] Length = 226 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 7/213 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F++FEG EGAGK+T I +L L+ + V +TREPGG+P AE RH++LS G Sbjct: 13 GRFVTFEGGEGAGKSTQIKMLAARLESEGMRVVLTREPGGSPGAEIMRHLVLSGMGKLLG 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEAE ++FAAAR DHV NVI PAL +G +LCDRF DS+ AYQG L+++Q + Sbjct: 73 AEAETLLFAAARDDHVRNVILPALSQGSWVLCDRFFDSTRAYQGSLGKVAPDVLNAMQRV 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ ++ PD T+ILD+PV++GLKR R D FE +D+ H+ R F IA + Sbjct: 133 TIGDLKPDLTLILDVPVEVGLKRAAARRGAGAP---DRFEAEDIKFHKGLRDAFHKIADD 189 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 P RC ++D+ V+ +VW+ V++R+ Sbjct: 190 DPKRCVLIDATAGPDPVSL----LVWDAVRERL 218 >gi|304391675|ref|ZP_07373617.1| thymidylate kinase [Ahrensia sp. R2A130] gi|303295904|gb|EFL90262.1| thymidylate kinase [Ahrensia sp. R2A130] Length = 215 Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/205 (41%), Positives = 126/205 (61%), Gaps = 3/205 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I L + L+ ++V VTREPGGT AEA RHV+LS FG Sbjct: 3 GHFITFEGGEGAGKSTQIKRLAKKLEDDGHEVVVTREPGGTTGAEAVRHVVLSGAAQPFG 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E EA++FAAAR D+V +I+PAL G I+LCDRF+DSS YQG +D L+ Sbjct: 63 TELEAVLFAAARADNVRELIKPALARGAIVLCDRFMDSSRVYQGASGGVSSNMMDMLERA 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T++ DL + GLKR + + + D +E + + RR +L IA+ Sbjct: 123 VTEDARPDLTLLFDLSPEEGLKRAADVW---KDDGPDRYESEALAQQHIRRDAYLAIAKA 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +PDRC I+D++ + ++V+ + ++ Sbjct: 180 EPDRCKIIDASKTLRTVSKQVDRVI 204 >gi|209885250|ref|YP_002289107.1| thymidylate kinase [Oligotropha carboxidovorans OM5] gi|229621734|sp|B6JEC6|KTHY_OLICO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|209873446|gb|ACI93242.1| thymidylate kinase [Oligotropha carboxidovorans OM5] Length = 228 Score = 172 bits (436), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 94/214 (43%), Positives = 130/214 (60%), Gaps = 7/214 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GK+T I LL L+ + + VTREPGG+P AE RH+LLS G Sbjct: 13 GRFITFEGGEGSGKSTQIQLLAERLKGQGIETLVTREPGGSPGAEIVRHLLLSGVGKLLG 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+AE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG F+++L Sbjct: 73 ADAETLLFAAARDDHVHQVIEPALKKGVWVLCDRFTDSTAAYQGAAGKVDAAFIEALTHA 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ ++ PD T+ILD+PV +GL R R R A D FE++ + HE R + IA + Sbjct: 133 TIGDLEPDLTLILDVPVAVGLHRAIKR---RGKAVADRFEQESLSFHESLRDAYRKIAAD 189 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P RC +VD+ +V+ I WE +Q R++ Sbjct: 190 NPKRCAVVDANADAATVSERI----WETMQHRLA 219 >gi|218532450|ref|YP_002423266.1| dTMP kinase [Methylobacterium chloromethanicum CM4] gi|218524753|gb|ACK85338.1| dTMP kinase [Methylobacterium chloromethanicum CM4] Length = 244 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 89/191 (46%), Positives = 122/191 (63%), Gaps = 4/191 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL + Sbjct: 8 GVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKPY 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AEA++FAAAR+DH+EN+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 68 GPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLER 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ ++ PD T+ILDLP + GL R + R + D FE + + HE+ R F IA Sbjct: 128 VTLVDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIAE 184 Query: 183 NQPDRCHIVDS 193 +P+RC ++D+ Sbjct: 185 AEPERCRVIDA 195 >gi|299133890|ref|ZP_07027084.1| thymidylate kinase [Afipia sp. 1NLS2] gi|298591726|gb|EFI51927.1| thymidylate kinase [Afipia sp. 1NLS2] Length = 232 Score = 170 bits (431), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 94/218 (43%), Positives = 127/218 (58%), Gaps = 7/218 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GK+T I +L L+ + + VTREPGG+P AE RH+LLS G Sbjct: 17 GRFITFEGGEGSGKSTQIQMLADHLKSQGIETLVTREPGGSPGAEIVRHLLLSGVGKLLG 76 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+AE ++FAAAR DHV VIRPAL +G +LCDRF DS+ AYQG F+ +L Sbjct: 77 ADAETLLFAAARDDHVHQVIRPALDKGTWVLCDRFTDSTAAYQGAAGKVDPAFIQALTHA 136 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T ILD+PV +GL+R R R D FE + + HE R+ + IA + Sbjct: 137 TIGRLEPDLTFILDVPVAVGLQRAIKR---RGRTAADRFEGESLAFHESLREAYRRIAAD 193 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P RC ++D+ VA I E +Q R+ SS Sbjct: 194 NPARCVVIDANAEPAKVAERI----REALQSRLPAPSS 227 >gi|154253550|ref|YP_001414374.1| dTMP kinase [Parvibaculum lavamentivorans DS-1] gi|154157500|gb|ABS64717.1| dTMP kinase [Parvibaculum lavamentivorans DS-1] Length = 209 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/217 (42%), Positives = 128/217 (58%), Gaps = 8/217 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EG EGAGK+T + L L+ V +TREPGG P AEA RH+L++ V Sbjct: 1 MPRARFITLEGGEGAGKSTQVRRLAARLEAAGQRVTITREPGGAPGAEAIRHLLVTGDVA 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +AE ++ AAR DH+ IRPAL G ++CDRF+DS+ AYQG ++ L Sbjct: 61 RWTPKAEMLLHFAAREDHLSRTIRPALERGDWVICDRFVDSTMAYQGFAQGLGPELVNEL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +EI + + MP T+ILDLPV+ GL R +R E D +ER D+ HE RQ F I Sbjct: 121 KEIVIGDDMPGLTLILDLPVETGLARAGSRGQGAE----DRYERMDLRFHETLRQAFETI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A+N+P+RC +VD++ + VA I W V+ R+S Sbjct: 177 AKNEPERCVMVDASQTEDEVAEAI----WAEVKPRLS 209 >gi|144899825|emb|CAM76689.1| Thymidylate kinase [Magnetospirillum gryphiswaldense MSR-1] Length = 211 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 88/208 (42%), Positives = 123/208 (59%), Gaps = 5/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T + LL L+ + +V +TREPGG AEA R +L+S VD Sbjct: 1 MTDGRFITFEGGEGAGKSTQVRLLAESLRGRKREVVLTREPGGADGAEAIRTLLVSGAVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A EA++ +AAR DH+ + PAL G ++CDRF DS+ AYQG + L Sbjct: 61 RWDARTEALLHSAARRDHLVRTVWPALERGAWVICDRFADSTLAYQGYGHGLDRALIGQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E+++ PD T+ILDLPV+ GLKR R D +ER + H++ RQ FL I Sbjct: 121 AEVTMGRFRPDLTLILDLPVEEGLKRAGGR-----GGAEDRYERMGLDFHQRLRQGFLAI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +P RC ++D+ S ++V +IL V Sbjct: 176 ASAEPRRCAVIDATRSPEAVHQDILAAV 203 >gi|75675656|ref|YP_318077.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255] gi|123613520|sp|Q3SSL6|KTHY_NITWN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|74420526|gb|ABA04725.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255] Length = 230 Score = 167 bits (424), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 84/188 (44%), Positives = 120/188 (63%), Gaps = 3/188 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GK+T I +L LQ VTREPGG+P AE RH++LS G Sbjct: 13 GRFITFEGGEGSGKSTQIRILAERLQAAKLRAIVTREPGGSPGAEIIRHLVLSGVGKLLG 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+AE ++FAAAR DHV VI+PAL +G +LCDRF DS+ YQG+ + L++++ + Sbjct: 73 ADAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRVYQGQLGNVLPGVLNAMERV 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ ++ PD T+ILD+PV++GL+R R R S D FE +D+ H K R + IA + Sbjct: 133 TIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDIAFHRKLRDAYRAIAAS 189 Query: 184 QPDRCHIV 191 P RC ++ Sbjct: 190 DPQRCVVI 197 >gi|188583893|ref|YP_001927338.1| dTMP kinase [Methylobacterium populi BJ001] gi|179347391|gb|ACB82803.1| dTMP kinase [Methylobacterium populi BJ001] Length = 236 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 88/197 (44%), Positives = 123/197 (62%), Gaps = 10/197 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLS 56 G+FI+FEG EGAGK+T I+ L L+ + ++ TREPGGTP AEA R LL Sbjct: 8 GVFITFEGGEGAGKSTQIARLAATLRDEGGGREGRGREIVTTREPGGTPRAEALRAALLR 67 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +G AEA++FAAAR+DH+EN IRPAL G I+LCDRF DS+ AYQG + Sbjct: 68 GVAKPYGPFAEALMFAAARIDHIENRIRPALARGAIVLCDRFSDSTRAYQGAAGGLEPEL 127 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + SL+ +++ ++ PD T+ILDLP + GL R Q+R + D FE + + H++ R Sbjct: 128 IASLERVTLGDLRPDLTLILDLPPEAGLARAQSRGGGEPA---DRFEAEGMRFHQRLRTA 184 Query: 177 FLDIARNQPDRCHIVDS 193 F IA +P+RC I+D+ Sbjct: 185 FRAIAEAEPERCRIIDA 201 >gi|167646661|ref|YP_001684324.1| thymidylate kinase [Caulobacter sp. K31] gi|167349091|gb|ABZ71826.1| dTMP kinase [Caulobacter sp. K31] Length = 208 Score = 165 bits (418), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 125/217 (57%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEG EGAGK+T I L L+ DV +TREPGG+P AE R ++L+ VD Sbjct: 1 MTRGTFISFEGGEGAGKSTQIRRLAERLKADGADVVLTREPGGSPGAEQIRDLILNGHVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ A+R DHVE VIRPAL G I+LCDRF DS+ AYQG + + +L Sbjct: 61 RWSPITETLLMYASRRDHVERVIRPALERGAIVLCDRFADSTRAYQGAGGEAPIALIKAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E + +PD T+I D+P ++GL R R FE K + HE+ + FL+I Sbjct: 121 EEHVLGGTVPDLTLIFDIPAEVGLARALAR------GGEARFESKGLAFHERLGEAFLEI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 AR +P+RC ++++ + +V + VW V R+ Sbjct: 175 ARREPERCVVIEADDAIDAVWAD----VWGAVSARLG 207 >gi|302038227|ref|YP_003798549.1| thymidylate kinase [Candidatus Nitrospira defluvii] gi|300606291|emb|CBK42624.1| Thymidylate kinase [Candidatus Nitrospira defluvii] Length = 241 Score = 165 bits (417), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG EG GK+T LL L+ + YD TREPGGTP AE R VLL + Sbjct: 11 GLFITLEGTEGCGKSTQAKLLGEHLRNQGYDTVETREPGGTPLAEKIRSVLLDRADEPVA 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E EA + AAR HV VI PAL G I+LCDRF+DS+ AYQG L+ L + Sbjct: 71 PETEAFLVLAARRQHVAQVIEPALARGSIVLCDRFIDSTLAYQGYARGLDIATLERLNRL 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +MPD T++ DLPV GL R R +A L+ +R+ + H + R FLD+A+ Sbjct: 131 ATHTLMPDLTLVFDLPVSTGLAR------RRSAAELNRLDRESLRFHRRVRAGFLDLAKR 184 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R IV + S ++VA + IV L+ + Sbjct: 185 HPRRIQIVSARASRETVARAVARIVTPLLDR 215 >gi|170744323|ref|YP_001772978.1| dTMP kinase [Methylobacterium sp. 4-46] gi|168198597|gb|ACA20544.1| dTMP kinase [Methylobacterium sp. 4-46] Length = 226 Score = 164 bits (416), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 85/194 (43%), Positives = 121/194 (62%), Gaps = 3/194 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+ EG EGAGK+T ++ L +L+R + +V TREPGG+P AE R LL+ + Sbjct: 6 RPGLFITLEGGEGAGKSTQVARLAEWLRRSDREVVTTREPGGSPRAEQIRTALLAGAAKD 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G AEA++F+AARLDH+ ++IRPAL G +++CDRF DS+ AYQG + +L+ Sbjct: 66 HGPFAEALLFSAARLDHLASLIRPALARGAVVVCDRFADSTRAYQGVAGGIDPECVAALE 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD T+ILDLP +IGL R + R L D FE + + H++ R+ F I Sbjct: 126 RVVVGATRPDLTLILDLPPEIGLARARGRERGLARGP--DRFEAEALAFHQRLREAFRGI 183 Query: 181 ARNQPDRCHIVDSA 194 A +P RC +VD+A Sbjct: 184 AAREPARCALVDAA 197 >gi|95930676|ref|ZP_01313410.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684] gi|95133328|gb|EAT14993.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684] Length = 216 Score = 164 bits (415), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 6/213 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT I LL L+ + +DV TREPGG A+ R VLL + Sbjct: 2 GQFITFEGIEGCGKTTQIRLLATALRHQGHDVIETREPGGCDIADQIRAVLLDAKNNRMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120 + E +++AAAR HV VIRPAL GK +LCDRF D++ AYQG + L +D +L Sbjct: 62 SPTELLLYAAARAQHVAEVIRPALDAGKTVLCDRFCDATLAYQG---YGRQLDIDQITTL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q V PD T++LDLPV+IGL R + R D FE++ + H++ RQ +L + Sbjct: 119 NAYACQGVRPDTTLLLDLPVEIGLGRARQRNEQHSGPNEDRFEQESLNFHQRIRQAYLQL 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A N+P R I+D+ Q+VA I + + ++Q Sbjct: 179 ADNEPQRFLIIDAQGKPQTVAERIASAMNTIIQ 211 >gi|39997327|ref|NP_953278.1| thymidylate kinase [Geobacter sulfurreducens PCA] gi|59798354|sp|Q74AX0|KTHY_GEOSL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|39984218|gb|AAR35605.1| thymidylate kinase [Geobacter sulfurreducens PCA] gi|298506264|gb|ADI84987.1| thymidylate kinase [Geobacter sulfurreducens KN400] Length = 213 Score = 164 bits (414), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 123/212 (58%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT I + L+ + V VTREPGG P A+ R +LL G Sbjct: 2 GYFITFEGIEGCGKTTQIKRAAQSLREAGHRVVVTREPGGCPIADDIRAILLDAGNSAMV 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR HV VI PAL EG ++LCDRF DS+ YQG + + L + Sbjct: 62 PTTELLLYAAARAQHVAEVIAPALAEGAVVLCDRFTDSTLVYQGFGRNLDRDLIARLNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ PD TI+LD PV +GL R R + R++ + FER+ ++ HE+ R+ FL +A Sbjct: 122 AAGQIRPDLTILLDCPVAVGLARAAARINSRQTNREERFERESLLFHERVREGFLSLAGG 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P R ++D ++ AT + +++ V +R Sbjct: 182 EPHRFAVIDGNDGVEATATAVADVLLNRVPRR 213 >gi|170747926|ref|YP_001754186.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831] gi|170654448|gb|ACB23503.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831] Length = 240 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/194 (44%), Positives = 119/194 (61%), Gaps = 2/194 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG EGAGK+T I+ L L+ R V VTREPGG+P AE R LL Sbjct: 13 GGTFITFEGGEGAGKSTQIARLAATLRARSGRPVCVTREPGGSPRAEEIRAALLDGVAKP 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G AEA++F+AAR+DH++ +IRPAL G+ +LCDRF+DS+ AYQG +D+L+ Sbjct: 73 YGPFAEALLFSAARIDHLDRLIRPALRRGETVLCDRFIDSTRAYQGAAGGLDPGIVDALE 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T+ILDL + GL R R + R D FE + + H + R+ FL IA Sbjct: 133 RVVVGPTRPDLTLILDLAPESGLARAAGRGA-RTGQGADRFEAEALDFHVRLREAFLAIA 191 Query: 182 RNQPDRCHIVDSAH 195 +PDRC ++D++ Sbjct: 192 GAEPDRCAVIDASR 205 >gi|302383105|ref|YP_003818928.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264] gi|302193733|gb|ADL01305.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264] Length = 208 Score = 162 bits (410), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 5/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G FI+FEG EG GK+T ++LL L + DV TREPGG+P EA R +++S D Sbjct: 1 MSRGRFITFEGGEGTGKSTQVALLVDRLGARGRDVIRTREPGGSPGGEAIRSLVVSGSAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A E ++ AAR DH+E IRPAL G+ ++CDRF DSS AYQG ++ F+++L Sbjct: 61 RWSARTELLLMFAARSDHLERTIRPALEAGQWVVCDRFADSSRAYQGLAGGAETAFVEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V PD T+I DLP ++GL+R +L + FE K + H+ R+ F I Sbjct: 121 DAHVVGTNQPDLTLIFDLPAEVGLER-----ALARAQGDTRFESKGLAFHQNLRRAFQTI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 AR P+RC ++D+ S V + V Sbjct: 176 ARAHPERCRLIDATGSIDDVQARVWAAV 203 >gi|329889614|ref|ZP_08267957.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568] gi|328844915|gb|EGF94479.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568] Length = 208 Score = 160 bits (406), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 86/216 (39%), Positives = 123/216 (56%), Gaps = 9/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGKTT LL L+ + DV TREPGG+P AE R++ +S D Sbjct: 1 MQRGRFITFEGGEGAGKTTQARLLVERLRARGLDVLQTREPGGSPGAEEIRNIAVSGEAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A E ++ AAR DH+E I PAL G+ ++CDRF DSS YQG + +++L Sbjct: 61 RWSARTETLLMYAARSDHLERTILPALEAGRWVVCDRFADSSRVYQGAGGGTPESLIEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD T++ DLPV++GL R R L E+ FE K + H+K R FL + Sbjct: 121 DDAVVNGDQPDLTLVFDLPVEVGLDRAFGR-GLFET----RFESKGLAFHQKLRDGFLKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A P+RC ++D+ V+ + W +V++R+ Sbjct: 176 AERHPERCVVLDATGEVDEVSARL----WAVVEERL 207 >gi|220926669|ref|YP_002501971.1| thymidylate kinase [Methylobacterium nodulans ORS 2060] gi|219951276|gb|ACL61668.1| thymidylate kinase [Methylobacterium nodulans ORS 2060] Length = 225 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 82/190 (43%), Positives = 117/190 (61%), Gaps = 3/190 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+ EG EGAGK+T I+ L L+ + +V TREPGG+P AE R LL+ + Sbjct: 6 QPGVFITVEGGEGAGKSTQIARLAERLRAGDREVITTREPGGSPRAEQIRTALLAGAAKD 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G AEA++F+AARLDH+ +IRPAL G ++LCDRF DS+ AYQG + +L+ Sbjct: 66 HGPFAEALLFSAARLDHLNTLIRPALARGAVVLCDRFADSTRAYQGAAGGIDPQEVAALE 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T+ILDLP ++GL R + R S S D FE + + H++ R+ F IA Sbjct: 126 RVVVGPTRPDLTLILDLPPELGLARARRRAS---SPGPDRFEAETLSFHQRLREAFRAIA 182 Query: 182 RNQPDRCHIV 191 +P+RC ++ Sbjct: 183 AQEPERCVLI 192 >gi|114570004|ref|YP_756684.1| thymidylate kinase [Maricaulis maris MCS10] gi|114340466|gb|ABI65746.1| thymidylate kinase [Maricaulis maris MCS10] Length = 211 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 88/196 (44%), Positives = 117/196 (59%), Gaps = 5/196 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT I L L ++ DV VTREPGGTP AE R +LL+ V+ Sbjct: 1 MKHGKFITLEGGEGAGKTTLIQGLTHALADRDIDVVVTREPGGTPGAELLRDLLLNGEVE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + EA++ AAR+DHVE I+PAL G +LCDRF DS+ AYQG + L L Sbjct: 61 RWSSRTEALLMYAARVDHVERRIKPALSRGAWVLCDRFADSTRAYQGVAGGLEPAELADL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q ++ + D T+I+DL +IGLKR +L+ + FE+ D H + RQ FLDI Sbjct: 121 QRFALGDFSADMTLIVDLDPEIGLKR-----TLQRGEKITRFEKFDTSYHRRLRQAFLDI 175 Query: 181 ARNQPDRCHIVDSAHS 196 A P+RC ++D S Sbjct: 176 ASEDPERCVVLDGTQS 191 >gi|312115143|ref|YP_004012739.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100] gi|311220272|gb|ADP71640.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100] Length = 249 Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 93/246 (37%), Positives = 126/246 (51%), Gaps = 36/246 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EGAGKTT +L L+RK +V +TREPGGTP AEA R VLLS FG Sbjct: 3 GRFITLEGGEGAGKTTQAKVLAERLRRKGINVLLTREPGGTPRAEAIREVLLSGKAKRFG 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA++F AAR H+E IRPAL G ++CDRF DS+ AYQG ++++ + Sbjct: 63 ALGEAVLFYAARESHLELGIRPALERGTWVICDRFSDSTRAYQGAAGGLPLSVIETIDKA 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY-------------------------------- 151 V + PD T+I DLP ++GLKR R Sbjct: 123 VVGDTRPDLTLIFDLPPELGLKRAAERLRGGVVSAAVGGERAEPAAAAGGSPGAAAGSDV 182 Query: 152 ----SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 L ++ D FE ++ H R FL IA+ +PDRC +VD++ + V + +I Sbjct: 183 IAPAPLVDAPASDRFETMNLTFHRSLRAEFLAIAKAEPDRCAVVDASDTPNRVEDKVWSI 242 Query: 208 VWELVQ 213 V + Q Sbjct: 243 VRDRFQ 248 >gi|83588915|ref|YP_428924.1| thymidylate kinase [Moorella thermoacetica ATCC 39073] gi|83571829|gb|ABC18381.1| thymidylate kinase [Moorella thermoacetica ATCC 39073] Length = 207 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 86/214 (40%), Positives = 122/214 (57%), Gaps = 16/214 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT + L+ +L R+ V TREPGGT +EA R +LL Sbjct: 1 MGRGLFITLEGPDGSGKTTQMDRLEEYLHRRGLAVERTREPGGTLLSEAIRRLLLEPSYS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A AE ++AAAR HV IRPAL GKI+LCDRF DS+ AYQG ++ L Sbjct: 61 PVDARAELFLYAAARAQHVAERIRPALAAGKIVLCDRFSDSTLAYQGYGRQLGAELVERL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ + PD T ++D+PV IGL R S D E++D+ H + RQ +LD+ Sbjct: 121 NDLATGNLRPDITFLIDVPVAIGLG--------RHSGGSDRLEQEDLEFHRRVRQGYLDL 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 AR +P R H++D S ++VWE +++ Sbjct: 173 ARREPRRVHLIDGTPS--------PDVVWEEIKE 198 >gi|51894393|ref|YP_077084.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863] gi|59798210|sp|Q67JB0|KTHY_SYMTH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|51858082|dbj|BAD42240.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863] Length = 214 Score = 159 bits (403), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 7/211 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG++G+GK+T I LL ++L ++ TREPGGTP AE R VLL Sbjct: 3 VFISFEGVDGSGKSTQIRLLLQYLDEQSVPYVFTREPGGTPIAEQIRRVLLDPANRGMSV 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR +HV IRPAL EGK+++CDRF+DSS YQG FL + E++ Sbjct: 63 ITEALLFAAARAEHVSRTIRPALEEGKVVICDRFVDSSLVYQGVAGGLPVEFLTQINEMA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P TI+LDL ++ L R R D ER+ H+ R+ +LD+AR + Sbjct: 123 TGALRPHRTIVLDLAPEVALAR-------RTGEEADRIERQSREYHQLVREGYLDLARAE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD++ S + V +I +V E++ +R Sbjct: 176 PRRVKVVDASRSVEEVQKDIRRLVEEVLPRR 206 >gi|154248245|ref|YP_001419203.1| dTMP kinase [Xanthobacter autotrophicus Py2] gi|154162330|gb|ABS69546.1| dTMP kinase [Xanthobacter autotrophicus Py2] Length = 217 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/208 (43%), Positives = 120/208 (57%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T L L+ + V TREPGG+P AEA RHVLLS + Sbjct: 1 MTQGRFITLEGGEGTGKSTQARRLAAHLRTLGHTVVETREPGGSPGAEAVRHVLLSGAAE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G AEA++FAAAR DHV+ +IRPAL G I++CDRF+DS+ YQG LD+L Sbjct: 61 PLGPVAEALLFAAARTDHVQTLIRPALAAGTIVICDRFIDSTRVYQGAVGQVAPPLLDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E++ PD T+ILD+P + GL R + R + D FE++ H R+ F+ Sbjct: 121 EEMATGGTRPDLTLILDVPPETGLARA----AARGNGDPDRFEKEGAAYHAAVREAFVAR 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P RC +VD+ +VA I IV Sbjct: 177 AAAAPARCVLVDATPDPDAVAAQIAGIV 204 >gi|116050964|ref|YP_790211.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14] gi|122260093|sp|Q02PC5|KTHY_PSEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|115586185|gb|ABJ12200.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14] Length = 210 Score = 157 bits (397), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ G + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + + +L+ Sbjct: 62 AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLTEVQAGLDRLLPNLLER 207 >gi|296388546|ref|ZP_06878021.1| thymidylate kinase [Pseudomonas aeruginosa PAb1] Length = 210 Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ G + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + + +L+ Sbjct: 62 AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|91977186|ref|YP_569845.1| thymidylate kinase [Rhodopseudomonas palustris BisB5] gi|91683642|gb|ABE39944.1| thymidylate kinase [Rhodopseudomonas palustris BisB5] Length = 252 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 97/215 (45%), Positives = 132/215 (61%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G FI+FEG EG+GK+T I LL + L+ N VTREPGG+P AE RH+LL+ GV Sbjct: 13 GRFITFEGGEGSGKSTQIKLLAKRLEGANLRTLVTREPGGSPGAEIVRHLLLA-GVGRLI 71 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 GAEAEA++FAAAR DHV +I+PAL G +LCDRF DS+ YQG L++LQ Sbjct: 72 GGAEAEALLFAAARDDHVRTLIQPALESGVWVLCDRFFDSTRVYQGRLGEVSPAMLNALQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ + PD T+ILD+PV+IGL R R R S D FE + + H + R + IA Sbjct: 132 DVTIGAMKPDLTVILDVPVEIGLARAAVR---RGSEAPDRFESESIDFHRRLRDAYRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+RC ++D+ VA I W VQ+R+ Sbjct: 189 AAEPERCVVIDANAEPHVVAARI----WLTVQERL 219 >gi|86749796|ref|YP_486292.1| thymidylate kinase [Rhodopseudomonas palustris HaA2] gi|86572824|gb|ABD07381.1| thymidylate kinase [Rhodopseudomonas palustris HaA2] Length = 246 Score = 157 bits (396), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 98/214 (45%), Positives = 137/214 (64%), Gaps = 8/214 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62 G FI+FEG EGAGK+T I LL + L++ + VTREPGG+P AE RH+LL+ G Sbjct: 13 GHFITFEGGEGAGKSTQIRLLAQRLEKAGLETLVTREPGGSPGAEIIRHLLLAGVGRAIG 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GAEAEA++FAAAR DHV +I+PAL G +LCDRF DS+ YQG L++LQ+ Sbjct: 73 GAEAEALLFAAARDDHVRTLIQPALDRGVWVLCDRFYDSTRVYQGRLGDVSPGMLNALQD 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ + PD T+ILD+PV+IGL R R R S D FE +++ H + R + IAR Sbjct: 133 VTIGTMKPDLTVILDVPVEIGLARAAVR---RGSDAPDRFESENIDFHRRLRDAYRQIAR 189 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+RC +VD AH+ V + + +W VQ+R+ Sbjct: 190 AEPERCVLVD-AHAEPKV---VADRIWLTVQERL 219 >gi|297717894|gb|ADI50090.1| thymidylate kinase [Candidatus Odyssella thessalonicensis L13] Length = 205 Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 5/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++G FI+FEG EG GK+T LL +L+++ Y+V +TREPGGT AE R +L+S V+ Sbjct: 1 MSAGKFITFEGGEGTGKSTQCQLLADYLRQQGYEVILTREPGGTDGAELIRALLVSGDVN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AAR+DH E VI PAL G ++CDRF DS+ AYQG FL +L Sbjct: 61 RWSGVTEALLLNAARVDHWEKVISPALNRGAWVICDRFADSTIAYQGFGRGLDIDFLWNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD T + DL IG+ R +R R S FE+ D+ H + R +L+I Sbjct: 121 HNSVLPGVQPDLTFVFDLDPAIGINRALSR---RTSEV--RFEKMDIEFHNRMRHGYLEI 175 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 A+N P RC +VD+ ++ Sbjct: 176 AKNHPQRCRLVDAGQDINTI 195 >gi|218960693|ref|YP_001740468.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans] gi|167729350|emb|CAO80261.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans] Length = 217 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 7/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+FEGIEG+GKTT I +L L+ K TREPGGT +EA R +LL+ E Sbjct: 12 SKGLFITFEGIEGSGKTTQIIMLVEVLKAKGIPYVTTREPGGTKISEAIRDLLLNPKFME 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +++ A+R H +I PAL EGKI++ DR+ DS+YAYQG ++ L Sbjct: 72 MKPETELLLYCASRAQHTAELILPALEEGKIVISDRYFDSTYAYQGAARELDEEVINVLT 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 S PD T +LDLPV++GL R++NR LD E++ + HEK R+ FL IA Sbjct: 132 RFSTYGRNPDLTFLLDLPVEVGLARIKNR-------NLDRLEQETLSFHEKVRRQFLSIA 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D + + IL+ + + Sbjct: 185 NKYPSRYIVLDGESQAEIIHRQILSTLQPFI 215 >gi|83858301|ref|ZP_00951823.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633] gi|83853124|gb|EAP90976.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633] Length = 211 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 86/208 (41%), Positives = 118/208 (56%), Gaps = 5/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT L L+ + +TREPGGTP AEA R++L+ + Sbjct: 1 MTQGRFITLEGGEGAGKTTLAKALSESLESQGVRTLITREPGGTPNAEALRNLLVEGDTE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +E ++ AAR+DHVE +IRP+L +G ++CDRF DS+ AYQG +D + Sbjct: 61 RWSALSETLLLYAARVDHVERLIRPSLDQGIWVICDRFSDSTRAYQGAAGGMSTAQIDEI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S+ PD T ++DL + GL+R + R E A FERK H R FLDI Sbjct: 121 DRASMHGFGPDLTFVVDLDPETGLERTRLRG---EGAT--RFERKPAAFHHALRVAFLDI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 AR P+RC ++D A VAT+ I+ Sbjct: 176 ARAAPERCVVLDGAMPADQVATSAFEIL 203 >gi|197105068|ref|YP_002130445.1| thymidylate kinase [Phenylobacterium zucineum HLK1] gi|196478488|gb|ACG78016.1| thymidylate kinase [Phenylobacterium zucineum HLK1] Length = 211 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 123/217 (56%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T + L L+ + +V TREPGG+ AE+ R ++L+ D Sbjct: 1 MARGRFITFEGGEGAGKSTQVKRLAARLEAQGLEVVTTREPGGSAGAESIRALVLNGEAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR DH+E VIRPAL G ++CDRF DS+ AYQG + + +L Sbjct: 61 RWSPVTETLLMYAARRDHIERVIRPALARGAWVICDRFADSTRAYQGAAGGTDPALIAAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++V PD T++ DLP ++GL+R R + FE K + H++ R+ F I Sbjct: 121 EAHILEDVRPDLTLVFDLPPEVGLERAHAR-----AGAEMRFESKGMAFHQRLREGFRAI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A +P RC ++D+ +V VW V +R++ Sbjct: 176 AAAEPQRCAVIDATAPMDAVE----GAVWTAVSERLA 208 >gi|330878246|gb|EGH12395.1| thymidylate kinase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 210 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAGVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A S V ++ ++ EL++ Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206 >gi|148265181|ref|YP_001231887.1| dTMP kinase [Geobacter uraniireducens Rf4] gi|189028834|sp|A5G696|KTHY_GEOUR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146398681|gb|ABQ27314.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 213 Score = 155 bits (392), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 118/206 (57%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG+EG GKTT I LL + L + + V VTREPGG P A+ AR +LL Sbjct: 2 GCFITFEGVEGCGKTTQIKLLAQHLTEQGHTVIVTREPGGCPIADQARAILLDADNRAMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR HV+ +++PAL K++LCDRF D++ AYQG + L ++ Sbjct: 62 PTTELLLYAAARAQHVQEIVKPALAANKVVLCDRFTDATIAYQGYGRGLDPATIAYLNDL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P T++LD PV++GLKR +R + A + FE + V+ H K R +L +A + Sbjct: 122 ATDGLKPRLTVLLDCPVEVGLKRAFDRINGAAGAREERFELESVLFHRKVRDGYLKLAED 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 +P+R I+D + Q I V Sbjct: 182 EPERFIIIDGSQGVQETEAAITAAVL 207 >gi|310816869|ref|YP_003964833.1| thymidylate kinase [Ketogulonicigenium vulgare Y25] gi|308755604|gb|ADO43533.1| thymidylate kinase [Ketogulonicigenium vulgare Y25] Length = 205 Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 120/208 (57%), Gaps = 10/208 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFISFEGI+G+GK+T +L L+ + +DV +TREPGG+P AE R ++L+ D Sbjct: 1 MTCGLFISFEGIDGSGKSTQARVLADALRGRGHDVVLTREPGGSPGAEEIRRLVLTGATD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E I PAL G+I++ DRF DS+ AYQG +D+L Sbjct: 61 RWSAETETLLFTAARRDHLEKTILPALAAGQIVITDRFADSTRAYQGATRGDLRGIVDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS--LRESACLDYFERKDVMIHEKRRQIFL 178 + + PD T ++D L R R + LR FE + + +K R ++L Sbjct: 121 HALMIGR-EPDLTFVIDADPAASLTRGLARSTDELR-------FEEFGLPLQQKMRAVYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILN 206 DIA QP RC ++D A + +VA IL Sbjct: 173 DIAHAQPQRCIVIDGAGTIDAVAARILT 200 >gi|313885558|ref|ZP_07819308.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8] gi|312619288|gb|EFR30727.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8] Length = 212 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 125/206 (60%), Gaps = 4/206 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFIS EG +G+GK++ I L L + +D+ +TREPGG+P AE R V+L Sbjct: 4 NGLFISIEGPDGSGKSSAIQGLATRLSQDGFDLVLTREPGGSPIAEQIRQVILDVNNTAM 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R H+++ I PAL GK+++ DRF+DSS AYQG + + ++ + Sbjct: 64 DPMTEALLYAAGRRQHLKDTILPALAAGKVVISDRFVDSSLAYQGVGRNLSQTDIWNINQ 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++Q +PD T++LD+P ++GLKR+ Y R D +++D+ H K RQ FLD+A Sbjct: 124 YAIQGHLPDITLLLDVPAEVGLKRI---YQARNQRQFDRLDQEDLSFHNKVRQAFLDLAA 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 +Q DR H++D+ + V + ++ Sbjct: 181 DQ-DRIHVIDARQAVDQVVEDAFQVL 205 >gi|28870981|ref|NP_793600.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000] gi|38257966|sp|Q87YH1|KTHY_PSESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28854230|gb|AAO57295.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000] gi|331019150|gb|EGH99206.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 210 Score = 154 bits (390), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A S V ++ ++ EL++ Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206 >gi|330962619|gb|EGH62879.1| thymidylate kinase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 210 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAARLRAQGVEVLLTREPGGTPLAERVRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ AR Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRTTYLNRAR 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD++ + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDASQTLAQVQASLDTLLPQLLE 206 >gi|78223521|ref|YP_385268.1| thymidylate kinase [Geobacter metallireducens GS-15] gi|78194776|gb|ABB32543.1| thymidylate kinase [Geobacter metallireducens GS-15] Length = 217 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 79/195 (40%), Positives = 112/195 (57%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GK+T + L+ L R + V VTREPGG P A+A R +LL Sbjct: 2 GFFITFEGIEGCGKSTQVRLVAERLSRAGHGVVVTREPGGCPIADAIRAILLDARNSAMV 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV VI PAL GKI+LCDRF DS+ AYQG + L + Sbjct: 62 PMAELLLYAAARAQHVAEVIEPALAAGKIVLCDRFTDSTMAYQGFGRKLDRELIAQLNSL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LD V+ GL R R + +A + FE++ ++ HE+ R FL +A Sbjct: 122 AAGSIRPDLTLLLDCSVETGLARAMARINTSSAAREERFEQESILFHERIRDGFLSLAAA 181 Query: 184 QPDRCHIVDSAHSFQ 198 +P R ++D + + Sbjct: 182 EPGRFVVLDGSGGIE 196 >gi|83949598|ref|ZP_00958331.1| thymidylate kinase [Roseovarius nubinhibens ISM] gi|83837497|gb|EAP76793.1| thymidylate kinase [Roseovarius nubinhibens ISM] Length = 210 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+FISFEGI+G+GK+T + L LQ + V +TREPGG+P AE R ++L D Sbjct: 5 RAGVFISFEGIDGSGKSTQVRRLADHLQARGLRVRLTREPGGSPGAEDIRKLVLEGAGDR 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E E ++F AAR DH+E VI PAL G++++CDRF DS+ YQG + +D L Sbjct: 65 WSPETEILLFTAARRDHMERVILPALAAGEVVICDRFADSTRMYQGLASAEMRALVDQLH 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD T+++D+ ++GL R R E FE + + + R FLD+A Sbjct: 125 DLMIGR-EPDLTLLIDMDPEVGLARALARQGGEE-----RFEGRGIEWQRRMRAGFLDLA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 PDR +VD A +VA I + Sbjct: 179 EAHPDRIRVVDGAGEIDAVAGQIATLT 205 >gi|77919289|ref|YP_357104.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380] gi|123574092|sp|Q3A3X3|KTHY_PELCD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77545372|gb|ABA88934.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380] Length = 216 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 82/200 (41%), Positives = 115/200 (57%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FIS EGIEG+GKTT I L L+ + V +TREPGG P A+ R +LL Sbjct: 3 FFISLEGIEGSGKTTQIKRLADRLESLGHAVLITREPGGCPIADQIRQILLHPDNGHLDP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +++AAAR HV VIRPAL +GKI+LCDR+ D++ AYQG + L E++ Sbjct: 63 KAELLLYAAARAQHVAEVIRPALDQGKIVLCDRYCDATLAYQGYARGLDLPMVKQLNELA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 P T++LD+P D GL R ++R +L FE++ + H K RQ +LD+AR + Sbjct: 123 AGNCRPHLTLLLDMPHDRGLLRARSRNALGAGPEEGRFEQESLAFHNKVRQGYLDLARQE 182 Query: 185 PDRCHIVDSAHSFQSVATNI 204 P R +VD+ + V I Sbjct: 183 PQRIKVVDANGTLDEVCHRI 202 >gi|237800352|ref|ZP_04588813.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023209|gb|EGI03266.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 210 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSEESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIATLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLAEVQASLDTLLPQLLE 206 >gi|325295138|ref|YP_004281652.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065586|gb|ADY73593.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 206 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 120/204 (58%), Gaps = 7/204 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T LL + +K + +TREPGGTPAAE R+ +L + F A Sbjct: 1 MFITFEGIEGCGKSTQAKLLYDWFLKKGKEAILTREPGGTPAAEEIRNFILRPRKETFPA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ AAR HVEN+I+PAL +G ++CDRF+DS+ AYQG ++ L E + Sbjct: 61 FAELCLYMAARGFHVENLIKPALKKGIWVVCDRFVDSTVAYQGYGRGINVELIEKLNEEA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T ++D+PV+IG R++ R LD E++++ HE+ RQ FL IA Sbjct: 121 TGNLKPDLTFLIDVPVEIGFSRIKRR-------DLDRMEQEEMDFHERVRQGFLRIAEKN 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 +R ++D + ILN + Sbjct: 174 SERVIVIDGTKKVDEIFDEILNTL 197 >gi|49078908|gb|AAT49833.1| PA2962 [synthetic construct] Length = 211 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L+ Sbjct: 62 AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|15598158|ref|NP_251652.1| thymidylate kinase [Pseudomonas aeruginosa PAO1] gi|107102512|ref|ZP_01366430.1| hypothetical protein PaerPA_01003575 [Pseudomonas aeruginosa PACS2] gi|218890840|ref|YP_002439704.1| thymidylate kinase [Pseudomonas aeruginosa LESB58] gi|254235937|ref|ZP_04929260.1| thymidylate kinase [Pseudomonas aeruginosa C3719] gi|313108146|ref|ZP_07794281.1| thymidylate kinase [Pseudomonas aeruginosa 39016] gi|14285514|sp|Q9HZN8|KTHY_PSEAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732662|sp|B7V167|KTHY_PSEA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|9949060|gb|AAG06350.1|AE004722_6 thymidylate kinase [Pseudomonas aeruginosa PAO1] gi|126167868|gb|EAZ53379.1| thymidylate kinase [Pseudomonas aeruginosa C3719] gi|218771063|emb|CAW26828.1| thymidylate kinase [Pseudomonas aeruginosa LESB58] gi|310880783|gb|EFQ39377.1| thymidylate kinase [Pseudomonas aeruginosa 39016] Length = 210 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L+ Sbjct: 62 AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|167032505|ref|YP_001667736.1| thymidylate kinase [Pseudomonas putida GB-1] gi|189030837|sp|B0KF60|KTHY_PSEPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166858993|gb|ABY97400.1| dTMP kinase [Pseudomonas putida GB-1] Length = 210 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAERVRELLLAPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++ DLPV++GL R R LD FE++ E RQ +L A+ Sbjct: 122 FVQGGLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A S ++V +I ++ +V++ Sbjct: 176 RAPQRYSLLDAAQSLEAVQRDIDALLPGIVER 207 >gi|281356872|ref|ZP_06243362.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548] gi|281316430|gb|EFB00454.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548] Length = 219 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 3/213 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVD 60 + G I+FEG EGAGK+T + LL +L+ K ++V TREPGGTP AE R V+ + G + Sbjct: 9 HPGRLITFEGPEGAGKSTQLKLLAGYLEEKGFEVIATREPGGTPLAERLRAVIKAFEGEE 68 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR HV VIRPAL GKI+LCDR+ DS+ AYQG +D+L Sbjct: 69 KLHNTTELLLIEAARSQHVREVIRPALAAGKIVLCDRYFDSTTAYQGGARGFDAEAIDAL 128 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ E PD T++ DL + G R + R + D FE + + H + R+ +L I Sbjct: 129 NDLAIAECAPDLTLLFDLTPEAGFARTRTRTETQGEH--DRFEEEKLEFHRQVRESYLTI 186 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A +P+R +V + Q + T + +V EL++ Sbjct: 187 AAREPERVRVVAADRPAQEIQTEVRKLVDELIR 219 >gi|302187273|ref|ZP_07263946.1| thymidylate kinase [Pseudomonas syringae pv. syringae 642] Length = 210 Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206 >gi|152985503|ref|YP_001347571.1| thymidylate kinase [Pseudomonas aeruginosa PA7] gi|166223103|sp|A6V3D6|KTHY_PSEA7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150960661|gb|ABR82686.1| thymidylate kinase [Pseudomonas aeruginosa PA7] Length = 210 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGVEVQLTREPGGTPLAERIRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L+ Sbjct: 62 AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+ V + ++ L+++ Sbjct: 176 QAPQRYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|66044897|ref|YP_234738.1| thymidylate kinase [Pseudomonas syringae pv. syringae B728a] gi|75502746|sp|Q4ZVX2|KTHY_PSEU2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|63255604|gb|AAY36700.1| Thymidylate kinase [Pseudomonas syringae pv. syringae B728a] Length = 210 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ AR Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V + ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206 >gi|90415870|ref|ZP_01223803.1| thymidylate kinase [marine gamma proteobacterium HTCC2207] gi|90332244|gb|EAS47441.1| thymidylate kinase [marine gamma proteobacterium HTCC2207] Length = 208 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 123/215 (57%), Gaps = 15/215 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GKTT+I ++ ++ K TREPGGTP AE R +LL+ + Sbjct: 3 GKFITIEGTEGVGKTTNIKFIQDWMDSKKLTYGCTREPGGTPLAEQVRELLLAPREESVC 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-- 121 AE ++ AAR H+ VI P L EG +LCDRF D++YAYQG + +H+ D ++ Sbjct: 63 NTAELLMVFAARAQHLNQVIEPMLGEGAWVLCDRFTDATYAYQG---AGRHMRDDLIRDL 119 Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E+ VQ + PD T+ILD+PV IGL R R + D FE++ V E+ R +L I Sbjct: 120 ELMVQGSLQPDLTLILDIPVQIGLARASER------STPDRFEQEQVAFFERVRNRYLQI 173 Query: 181 ARNQPDRCHIVDSAHSFQSVA---TNILNIVWELV 212 A++ P RC ++D++ + + V T L WE V Sbjct: 174 AQDNPQRCVVIDASLTLEGVQAQITQTLETFWETV 208 >gi|330952693|gb|EGH52953.1| thymidylate kinase [Pseudomonas syringae Cit 7] Length = 210 Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGIQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206 >gi|218289082|ref|ZP_03493319.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1] gi|218240907|gb|EED08085.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1] Length = 213 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 3/214 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I+FEGI+GAGKTT + L +L+ + V VTREPGGT +A R +LL Sbjct: 1 MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HVE +IRPAL G+I+LCDRF+D+S AYQG ++++L Sbjct: 61 EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + PD T+ DL R++ R E LD ER+D E+ F + Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARV---EGGGLDRIERRDEAFFERVADAFERL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R P+ +D+A S + I +VW L+Q+ Sbjct: 178 WRAMPEVRKRIDAARSPDDIEQEIRALVWNLIQQ 211 >gi|222055245|ref|YP_002537607.1| dTMP kinase [Geobacter sp. FRC-32] gi|254808294|sp|B9M910|KTHY_GEOSF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221564534|gb|ACM20506.1| dTMP kinase [Geobacter sp. FRC-32] Length = 214 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 85/195 (43%), Positives = 117/195 (60%), Gaps = 7/195 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT I LL++ L K + V +TREPGG P A+ R +LL Sbjct: 2 GCFITFEGIEGCGKTTQIKLLEQHLAEKGFKVLLTREPGGCPIADQIRAILLDAANSAMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120 AE +++AAAR HVE VI+PAL + I+LCDRF D++ AYQG + L LDS L Sbjct: 62 PSAELLLYAAARAQHVEEVIKPALADDCIVLCDRFTDATVAYQG---YGRGLDLDSIGYL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVMIHEKRRQIFLD 179 +++ + P TI+LD PV++GLKR R + + A + FE + + H+K R +L Sbjct: 119 NQLATSGLKPQLTILLDCPVEVGLKRALARINGISAGAREERFELESTLFHQKVRNGYLK 178 Query: 180 IARNQPDRCHIVDSA 194 +A N+ R IVD Sbjct: 179 LAENEKGRFLIVDGG 193 >gi|258510140|ref|YP_003183574.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476866|gb|ACV57185.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 213 Score = 152 bits (384), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 3/214 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I+FEGI+GAGKTT + L +L+ + V VTREPGGT +A R +LL Sbjct: 1 MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HVE +IRPAL G+I+LCDRF+D+S AYQG ++++L Sbjct: 61 EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + PD T+ DL R++ R E LD ER+D E+ F + Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARA---EGGGLDRIERRDEAFFERVADAFERL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R P+ +D+A S + I +VW L+Q+ Sbjct: 178 WRAAPEVRKRIDAARSPDDIEQEIRALVWNLIQQ 211 >gi|330973853|gb|EGH73919.1| thymidylate kinase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 210 Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELMLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ AR Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V + ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206 >gi|330966243|gb|EGH66503.1| thymidylate kinase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 210 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VI PAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVICPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P+R +VD+A S V ++ ++ EL++ Sbjct: 176 AEPERYRLVDAAQSLADVQASLDKLLPELLE 206 >gi|167768112|ref|ZP_02440165.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1] gi|317499447|ref|ZP_07957714.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA] gi|167709636|gb|EDS20215.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1] gi|291559963|emb|CBL38763.1| thymidylate kinase [butyrate-producing bacterium SSC/2] gi|316893319|gb|EFV15534.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA] Length = 208 Score = 152 bits (383), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG +GAGKTT I LL+ +L K YD+ V REPGGTP +EA R+V+L+ E G Sbjct: 2 GLFLTVEGPDGAGKTTQIELLRDYLSDKGYDIIVCREPGGTPISEAVRNVILNKEFTEMG 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR +E VIRPAL +GKI++CDRF++SS YQG + + + Sbjct: 62 HMTELLLYAAARAQLIEEVIRPALEDGKIVICDRFVESSAVYQGIARGMGIDLVYKVNQF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + MPD TI++DL + G+ R ++ A LD E + + H+K + + +A Sbjct: 122 AIGDTMPDLTIMIDLDAEAGISRK------KKQAELDRMESETIDFHKKVVEGYRQLASL 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 PDR + VD + + + + I++ V Sbjct: 176 HPDRIYTVDGSLTIEEIHQKIVSQV 200 >gi|288958657|ref|YP_003448998.1| dTMP kinase [Azospirillum sp. B510] gi|288910965|dbj|BAI72454.1| dTMP kinase [Azospirillum sp. B510] Length = 229 Score = 152 bits (383), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 123/218 (56%), Gaps = 13/218 (5%) Query: 4 GLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G I+ EG EGAGK+T + L+ L+ + + TREPGG+P AE R +L++ Sbjct: 11 GRLITLEGGEGAGKSTQLRRLAGRLRETLRARGAGLVTTREPGGSPGAEEIRALLVTGET 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA++ +AAR DH+E + PAL G +LCDRFLDS+ AYQG +++ Sbjct: 71 GRWSPVTEALLHSAARRDHLERTVWPALETGDWVLCDRFLDSTMAYQGYGLGLGRALVET 130 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +Q ++ + PD T+ILD+ V+ GL+R R+ D +ER D+ H++ R FLD Sbjct: 131 VQRAALGDFRPDLTLILDIEVEKGLRRAVARH-----GGEDRYERMDIGFHQRLRDGFLD 185 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 IAR +PDRC +VD+ +V VW+ V R+ Sbjct: 186 IARREPDRCAVVDADADPDTVQAR----VWDAVSGRLG 219 >gi|313499927|gb|ADR61293.1| Tmk [Pseudomonas putida BIRD-1] Length = 210 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE++ E RQ +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P R ++D+A S ++V +I ++ ++++ Sbjct: 176 SAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207 >gi|148549001|ref|YP_001269103.1| thymidylate kinase [Pseudomonas putida F1] gi|166223106|sp|A5W709|KTHY_PSEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148513059|gb|ABQ79919.1| thymidylate kinase [Pseudomonas putida F1] Length = 210 Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE++ E RQ +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A S ++V +I ++ ++++ Sbjct: 176 GAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207 >gi|163746821|ref|ZP_02154178.1| thymidylate kinase [Oceanibulbus indolifex HEL-45] gi|161379935|gb|EDQ04347.1| thymidylate kinase [Oceanibulbus indolifex HEL-45] Length = 214 Score = 151 bits (381), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 120/206 (58%), Gaps = 6/206 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLF++FEGI+G+GK+T LL L + +DV +TREPGG+P AE R ++L D + Sbjct: 10 SGLFVTFEGIDGSGKSTQARLLADHLTAQGHDVVLTREPGGSPGAEEIRALVLQGDPDRW 69 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++F AAR DH+E IRPAL GKI++CDRF DS+ YQG +D L Sbjct: 70 SAQTEILLFTAARRDHLERTIRPALDAGKIVICDRFADSTRMYQGLSRGDLRQMVDDLHA 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + V PD T+++D+ GL+R +R + E FE V + + R FL++A+ Sbjct: 130 LMIG-VEPDLTVLIDMDPANGLERALSRQTAEE-----RFEDFGVELQAQMRAGFLNLAK 183 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 DR H++D +VA ++ V Sbjct: 184 EFSDRFHVIDGGREIDTVARDVTATV 209 >gi|256822417|ref|YP_003146380.1| thymidylate kinase [Kangiella koreensis DSM 16069] gi|256795956|gb|ACV26612.1| thymidylate kinase [Kangiella koreensis DSM 16069] Length = 216 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 88/217 (40%), Positives = 132/217 (60%), Gaps = 12/217 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GK+T+I+ +K + + KN + TREPGGTP AE R +LLS ++ Sbjct: 7 GKFITIEGTEGVGKSTNIAFIKAWFEAKNISLLHTREPGGTPFAEEIRELLLSQREEQVD 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A++E ++ AAR HV I+PAL + + +LCDRF D+S+AYQG + + L L+ L E+ Sbjct: 67 AKSELLLMYAARAQHVSQKIKPALEQRQWVLCDRFSDASFAYQG---AGRALGLNKLSEL 123 Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ PD TI+LDLPV++GL R Q R +D FE + V E+ RQ +L I Sbjct: 124 DQWVLEGFKPDLTILLDLPVEVGLSRAQER------GPIDRFEEEKVEFFEQVRQGYLQI 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A+ +P+R IVD+ S + V I ++ Q++V+ Sbjct: 178 AQQEPERMKIVDARGSLEKVQQQIEQVLIHFYQQQVT 214 >gi|292493122|ref|YP_003528561.1| thymidylate kinase [Nitrosococcus halophilus Nc4] gi|291581717|gb|ADE16174.1| thymidylate kinase [Nitrosococcus halophilus Nc4] Length = 213 Score = 151 bits (381), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 124/213 (58%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FIS EGIEGAGK+T + +++ L+ V VTREPGGTP E R +LL+ ++ Sbjct: 1 MGRGCFISVEGIEGAGKSTQLKFIQQLLESAGKAVTVTREPGGTPLGEQIRTLLLTPRLE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE E ++ AAR++HV VI PAL G+ +LCDRF +SYAYQG +++L Sbjct: 61 GMSAETELLLMFAARVEHVRQVISPALARGRWVLCDRFTGASYAYQGGGRGLPLARIEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ + PD T++LD+PV +GL+R +R R+ D FE++ E R+ +L + Sbjct: 121 EHWALNHLRPDLTLLLDVPVGVGLQRAASR---RQQP--DRFEQEQAGFFECVRKAYLSL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ + D ++D++ V I ++ ++ Sbjct: 176 AKERVDEFRLIDASMPLPEVQEAIQQVIMAFIE 208 >gi|149184555|ref|ZP_01862873.1| thymidylate kinase [Erythrobacter sp. SD-21] gi|148831875|gb|EDL50308.1| thymidylate kinase [Erythrobacter sp. SD-21] Length = 209 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG GK+T LL+ L+++ +V +TREPGGTP AEA R +LL + Sbjct: 1 MRKGKFIAFEGGEGMGKSTQARLLRDALEQRGIEVELTREPGGTPGAEAIREMLLHPPGE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +GA+AEA++FAAAR DHV +IRPA+ G+ ++CDRFLDSS AYQG + L Sbjct: 61 GWGAQAEALLFAAARADHVARLIRPAVEAGRWVVCDRFLDSSRAYQGSAGELGDEQVRKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 EI ++PD TI++ D V R R+ D +D H + F Sbjct: 121 HEIGTGGLLPDLTIVIGAHSD----EVSARLRARDGDTSDAIGGRDETYHRSVNKAFERF 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +P+R +D + S + V I+ + L+ Sbjct: 177 AEEEPNRFARIDGSGSIEDVHVRIMTALAGLL 208 >gi|327481307|gb|AEA84617.1| thymidylate kinase [Pseudomonas stutzeri DSM 4166] Length = 210 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + Sbjct: 3 GLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPMA 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L L+ + ++ Sbjct: 63 VDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQG---GGRGLSLERIAQL 119 Query: 124 SV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ PD T+I DLPVD+GL R R LD FE++ + E R +L Sbjct: 120 ETFVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQR 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A+ P R ++D+ + +V ++ ++ EL+ Sbjct: 174 AKAAPSRYRVIDAGQALNAVQCDVEALIPELL 205 >gi|110833935|ref|YP_692794.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2] gi|123050570|sp|Q0VQM6|KTHY_ALCBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110647046|emb|CAL16522.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2] Length = 208 Score = 150 bits (380), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 6/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG EGAGK++++ L L+ + V V+REPGGT AE+ R VLL+ + Sbjct: 2 SGRFITLEGGEGAGKSSNLVWLAEALRAEGKTVMVSREPGGTALAESIREVLLAPSNEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+E IRPAL G+ +LCDRFLD+++AYQG + +L+ Sbjct: 62 ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFLDATWAYQGAGRGLDSAAIAALEA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +++ PD TI+ D+PV++G+ R R A LD E++D ++ RQ +L A Sbjct: 122 LVIRDTRPDMTILFDVPVEVGMARAGKR------AALDRIEQEDRAFFDRIRQCYLARAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+R VD++ +SV + IV E+ Sbjct: 176 QEPNRFRTVDASQPLESVQQQLARIVEEM 204 >gi|260434141|ref|ZP_05788112.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157] gi|260417969|gb|EEX11228.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157] Length = 210 Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 123/211 (58%), Gaps = 6/211 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F++FEGI+G+GK+T +L L+ ++V +TREPGG+P AE R ++L D + Sbjct: 5 GMFLTFEGIDGSGKSTQARMLAEHLRLSGHEVVLTREPGGSPGAEEIRRLVLEGDPDRWS 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL EGKI++CDRF DS+ YQG +D L ++ Sbjct: 65 AETEILLFTAARRDHLERTIEPALAEGKIVICDRFADSTRMYQGLSRGDLRAIVDQLHQL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T+++D+ + GL R + R+ E FE + + R+ FL++A Sbjct: 125 MIRRE-PDLTLLIDMDPETGLARAKGRHGGEER-----FEDFGPDLQRRMRKGFLELAEE 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D SV+ ++ I + +Q+ Sbjct: 179 FPERFRVIDGNRDMDSVSRDVTQIALQALQQ 209 >gi|330502601|ref|YP_004379470.1| thymidylate kinase [Pseudomonas mendocina NK-01] gi|328916887|gb|AEB57718.1| thymidylate kinase [Pseudomonas mendocina NK-01] Length = 210 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLRERGIDVLLTREPGGTPLAERIRELLLEPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H++ VIRPAL G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLQQVIRPALANGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T+I DLPV+IGL R R LD FE++ E RQ +L A Sbjct: 122 FVQGELRPDLTLIFDLPVEIGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R ++D+ + V +I ++ L++ Sbjct: 176 QAPQRYRVLDAGQTLAQVQADIDALLPSLLE 206 >gi|84499967|ref|ZP_00998233.1| thymidylate kinase [Oceanicola batsensis HTCC2597] gi|84391901|gb|EAQ04169.1| thymidylate kinase [Oceanicola batsensis HTCC2597] Length = 217 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 117/203 (57%), Gaps = 6/203 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+SFEGI+G+GK+T +L L+ + DV +TREPGG+P AE R ++L D + Sbjct: 9 GLFLSFEGIDGSGKSTQARMLAEALRAEGRDVVLTREPGGSPGAEEIRALVLQGDPDRWS 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E ++F AAR DH+E IRPAL G +++CDRF DS+ YQG +D L + Sbjct: 69 AATEILLFTAARRDHLERTIRPALDRGAVVICDRFADSTRMYQGLSRGDLRRTVDDLHAL 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T+++D+ ++GL R + R + E FE + + R FLD+AR Sbjct: 129 MIG-IEPDLTLLIDMDPEVGLSRAKGRQGIEE-----RFEDFGAGLQARMRTGFLDLARE 182 Query: 184 QPDRCHIVDSAHSFQSVATNILN 206 P R ++D A +VA ++L Sbjct: 183 FPARFRVIDGARPEGTVAADVLT 205 >gi|289671976|ref|ZP_06492866.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5] Length = 210 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+ + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAGQTLADVQDSLDTLLPQLLE 206 >gi|330901144|gb|EGH32563.1| thymidylate kinase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 210 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+ + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAGQTLADVQASLDTLLPQLLE 206 >gi|319789392|ref|YP_004151025.1| thymidylate kinase [Thermovibrio ammonificans HB-1] gi|317113894|gb|ADU96384.1| thymidylate kinase [Thermovibrio ammonificans HB-1] Length = 206 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 7/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T L +L + Y +TREPGGTPAAE R VLL + F Sbjct: 1 MFITFEGIEGCGKSTQARLTYEWLLDRGYTSVLTREPGGTPAAEKVREVLLKRWEERFPP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ AAR HVEN+I+PAL EG I++CDRF DS+ AYQ F+ L + Sbjct: 61 MAELFLYEAARAFHVENLIKPALQEGSIVICDRFTDSTLAYQSFGRGLSREFVALLNRKA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T+++DLPV+ +R+ + D E + + H + R+ FL IAR + Sbjct: 121 TGGLKPDLTLLIDLPVEEAFRRIAQKSR-------DRMESEPLEFHRRVREGFLSIAREE 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P+R ++D + V + ++ E Sbjct: 174 PERVAVIDGRGTVSEVFERVKRVIEE 199 >gi|298291754|ref|YP_003693693.1| thymidylate kinase [Starkeya novella DSM 506] gi|296928265|gb|ADH89074.1| thymidylate kinase [Starkeya novella DSM 506] Length = 243 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 8/213 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T + L+ L + TREPGG+ AE RH++LS G Sbjct: 28 GRFITFEGGEGAGKSTQVRRLREKLAELGIEAVATREPGGSTGAEIMRHLILSGAAKPLG 87 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA +FAAAR DH++ IRPAL G ++CDRF DS+ AYQG + + +L+E+ Sbjct: 88 PLAEAALFAAARADHLDATIRPALARGAWVVCDRFADSTRAYQGVLGNIDPRLIAALEEV 147 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V + PD T+ILD+P + GL +R S R D FE + V H + R+ F +A N Sbjct: 148 TVGDTRPDLTLILDIPAEEGL----SRASARSGVAADRFESEGVGFHRRLREAFRALAEN 203 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P RC ++D+ +VA I W VQ+R+ Sbjct: 204 EPQRCVLIDARPDADTVAEAI----WTAVQERL 232 >gi|30250115|ref|NP_842185.1| thymidylate kinase [Nitrosomonas europaea ATCC 19718] gi|46576512|sp|Q82SW5|KTHY_NITEU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|30139222|emb|CAD86092.1| Thymidylate kinase [Nitrosomonas europaea ATCC 19718] Length = 215 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 84/208 (40%), Positives = 119/208 (57%), Gaps = 7/208 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EGI+GAGK+TH++ L+RFLQ K +V VTREPGGT EA R +LL Sbjct: 1 MQRGKFITVEGIDGAGKSTHLAWLERFLQDKGLEVVVTREPGGTALGEALRQLLLDH-RQ 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA++ AAR +H++ VI PAL G ++ DRF D+S+AYQG LD+L Sbjct: 60 AMHPETEALLMFAARREHLDKVILPALDRGAWVVSDRFTDASFAYQGGGRGVAQSKLDNL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ E+ PD T+ D+PV +G +R+Q+ + D FE + + E+ RQ +L Sbjct: 120 EQWVQAELSPDLTVYFDVPVIVGRERLQS------TRVADRFEMESNLFFERVRQAYLQR 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R +VD + V T + IV Sbjct: 174 AEQFPQRIRVVDGSRLLAEVKTAVAEIV 201 >gi|300023248|ref|YP_003755859.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888] gi|299525069|gb|ADJ23538.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888] Length = 209 Score = 150 bits (378), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 12/212 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG GK+T L L+R V +TREPGGTP E R +++ Sbjct: 1 MKRGKFITFEGGEGVGKSTQAKRLAERLERAGVPVIITREPGGTPVGEDVRDLIMKDRPT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FAAAR +HV +VIRPAL +G ++ DRF+DS+ YQG+R + + L Sbjct: 61 D--PMTELLLFAAARAEHVTSVIRPALDDGTWVISDRFIDSTRVYQGKRYGLEPELISLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +V PD T+ILDLP G++R QNR L ++ + + HE R+ FL+I Sbjct: 119 ERYTVSPDFPDLTLILDLPATEGVERAQNR------GTLSRYDAERIETHEVLRKGFLEI 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A ++P RC ++D++ SV T VW+ V Sbjct: 173 ATSEPKRCVLIDASLPVSSVETA----VWQAV 200 >gi|146282956|ref|YP_001173109.1| thymidylate kinase [Pseudomonas stutzeri A1501] gi|166223107|sp|A4VMR6|KTHY_PSEU5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145571161|gb|ABP80267.1| thymidylate kinase [Pseudomonas stutzeri A1501] Length = 210 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 12/212 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + Sbjct: 3 GLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPMA 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L L+ + ++ Sbjct: 63 VDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQG---GGRGLSLERIAQL 119 Query: 124 SV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ PD T+I DLPVD+GL R R LD FE++ + E R +L Sbjct: 120 ETFVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQR 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P R ++D+ + +V ++ ++ EL+ Sbjct: 174 AEAAPSRYRVIDAGQALNAVQCDVEALIPELL 205 >gi|330722496|gb|EGH00323.1| Thymidylate kinase [gamma proteobacterium IMCC2047] Length = 216 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 123/203 (60%), Gaps = 6/203 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+FI+ EGIEG GKTT+++ ++++LQ D+ VTREPGGTP AE R +LL+ + Sbjct: 4 QAGVFITVEGIEGVGKTTNMAFIQQYLQALGVDLTVTREPGGTPLAEEIRGLLLNNRDEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR H+ +I+P L +G +L DRF D++YAYQG + +L+ Sbjct: 64 LNNDAELLLVFAARAQHLGQLIKPTLAQGGWVLSDRFTDATYAYQGGGRELSMEMIANLE 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++ P+ T++LD+PV++GL R R LD FER+ EK R +L A Sbjct: 124 QMVQGDLRPNLTLLLDVPVEVGLSRAGQR------GELDRFEREKQAFFEKVRHTYLQRA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 + +P+R +VD++ +V +I Sbjct: 178 QAEPERFCVVDASQPLAAVQADI 200 >gi|170720716|ref|YP_001748404.1| thymidylate kinase [Pseudomonas putida W619] gi|259494278|sp|B1J4Z5|KTHY_PSEPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169758719|gb|ACA72035.1| dTMP kinase [Pseudomonas putida W619] Length = 207 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 6/210 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + A Sbjct: 1 MFITLEGPEGAGKSTNRDYLAARLREQGLDVVLTREPGGTPLAEKVRELLLAPSDEVMAA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L++ Sbjct: 61 DTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAALEQFV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 E+ PD T++ DLPV++GL R R LD FE++ E RQ +L AR + Sbjct: 121 QGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRARRE 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A ++V I ++ ++++ Sbjct: 175 PQRYDLLDAAQPLEAVQRAIDALLPGILER 204 >gi|254428585|ref|ZP_05042292.1| thymidylate kinase [Alcanivorax sp. DG881] gi|196194754|gb|EDX89713.1| thymidylate kinase [Alcanivorax sp. DG881] Length = 208 Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG EGAGK++++ L L+ V V+REPGGT AE+ R VLL+ G + Sbjct: 2 SGRFITLEGGEGAGKSSNLEWLADALRAAGKTVTVSREPGGTALAESIRGVLLAPGDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+E IRPAL G+ +LCDRF+D+++AYQG + L+ Sbjct: 62 ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFVDATWAYQGAGRGLDSAAIADLES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +++ PD T++ D+PV++G+ R R A LD E++D E+ RQ +L A Sbjct: 122 LVIRDTRPDMTVLFDVPVEVGMARAGKR------AALDRIEQEDRAFFERIRQCYLARAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R VD+ SV + IV E++ Sbjct: 176 QEPSRFRTVDAGQPLGSVQQQLGAIVEEML 205 >gi|56697578|ref|YP_167947.1| thymidylate kinase [Ruegeria pomeroyi DSS-3] gi|81558404|sp|Q5LPV9|KTHY_SILPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56679315|gb|AAV95981.1| thymidylate kinase [Ruegeria pomeroyi DSS-3] Length = 211 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLF++FEGI+G+GK+T LL L+ +DV +TREPGG+P AE R ++L D Sbjct: 3 GTGLFLTFEGIDGSGKSTQARLLAETLRAAGHDVVLTREPGGSPGAEEIRRLVLEGDPDR 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I PAL G++++CDRF DS+ YQG +D L Sbjct: 63 WSAETEILLFTAARRDHLERTIEPALAAGRVVICDRFADSTRMYQGLSRGDLRQLVDQLH 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+++D+ + GL R + R E FE + ++ R FLD+A Sbjct: 123 ALMIGR-EPDLTLLVDMDPETGLSRAKGRQGSEER-----FEDFGPELQQRMRAGFLDLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 R R I+D SVA ++ IV Sbjct: 177 REYAHRFRIIDGNRDMDSVAADVTEIV 203 >gi|330975208|gb|EGH75274.1| thymidylate kinase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 210 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+ +LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEGVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+ + V ++ ++ +L++ Sbjct: 176 AEPTRYRLVDAGQTLADVQASLDTLLPQLLE 206 >gi|104780789|ref|YP_607287.1| thymidylate kinase [Pseudomonas entomophila L48] gi|166223104|sp|Q1ICY2|KTHY_PSEE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|95109776|emb|CAK14481.1| thymidylate kinase [Pseudomonas entomophila L48] Length = 210 Score = 149 bits (376), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 113/202 (55%), Gaps = 6/202 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNREYLAARLREQGVDVVMTREPGGTPLAERIRELLLAPSEEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L+ Sbjct: 62 AVDTELLLMFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAILES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T++ DLPV++GL R R LD FE++ E RQ +L A Sbjct: 122 FVQGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAG 175 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 QP R ++D+A +V I Sbjct: 176 QQPQRYSLLDAAQPLAAVQRAI 197 >gi|71735430|ref|YP_273889.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487544|ref|ZP_05641585.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624541|ref|ZP_06457495.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649352|ref|ZP_06480695.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 2250] gi|123637325|sp|Q48L36|KTHY_PSE14 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71555983|gb|AAZ35194.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320327699|gb|EFW83707.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869264|gb|EGH03973.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 210 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|330985597|gb|EGH83700.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 210 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFADATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|297172305|gb|ADI23282.1| thymidylate kinase [uncultured actinobacterium HF0770_13M05] Length = 208 Score = 149 bits (375), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 86/220 (39%), Positives = 120/220 (54%), Gaps = 12/220 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG+EG GKTT+I L+ L++K DV VTREPGGTP AE R VLL + Sbjct: 1 MTRGRFITLEGVEGVGKTTNIGFLREILEQKGIDVLVTREPGGTPLAEEVREVLLQMRDE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++ AAR HV VI PAL +G+ +LCDR+ D++YAYQG L+ L Sbjct: 61 SMDPITEALLIFAARSQHVSAVIEPALNDGRWVLCDRYTDATYAYQGGGRGVPLDTLERL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD TI LD PV+I L R+ +R D FE +D + R +L I Sbjct: 121 AEFAQGSLWPDLTIFLDAPVNIALGRIADRQH-------DRFESEDSEFFARVRAGYLAI 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 + +R ++D+ S + V + + EL+ + PL Sbjct: 174 VERE-ERAVLIDATRSLEDVQSRLA----ELINNFLEPLG 208 >gi|226943614|ref|YP_002798687.1| thymidylate kinase [Azotobacter vinelandii DJ] gi|226718541|gb|ACO77712.1| thymidylate kinase [Azotobacter vinelandii DJ] Length = 211 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 118/215 (54%), Gaps = 6/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG EGAGK+T+ L L+ +V +TREPGGTP AE R +LL+ + Sbjct: 1 MSRGLFITLEGPEGAGKSTNRDYLAEGLRAAGREVVLTREPGGTPLAERIRELLLAPASE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR H+ VIRPAL+ G ++LCDRF D+SYAYQG + L Sbjct: 61 PMAVDTELLLVFAARAQHLAGVIRPALVRGAVVLCDRFTDASYAYQGAGRGVPEARIAIL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ PD T++ DLPV++GL R R D FE++D E RQ +L Sbjct: 121 EHFVQGDLRPDLTLLFDLPVEVGLARAAAR------GRPDRFEQEDRAFFEAVRQAYLRR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A N R +VD+ V + ++ +L++ R Sbjct: 175 AANDSARYRVVDAGRPLAEVQRTLDGLLPQLLESR 209 >gi|83593038|ref|YP_426790.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170] gi|83575952|gb|ABC22503.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170] Length = 214 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 82/223 (36%), Positives = 120/223 (53%), Gaps = 9/223 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT +S L + L +V TREPGG+P AEA R +L++ G + Sbjct: 1 MTGGRFITLEGGEGAGKTTQLSRLAQALAPLVPEVVTTREPGGSPGAEAIRGLLVAGGAE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AAAR DH+ + PAL G ++CDRF DS+ AYQG LD+L Sbjct: 61 RWDPRGEALLHAAARRDHLLRTVWPALARGAWVVCDRFADSTSAYQGGGHGLPQDELDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 PD T+I DLPV +GL R R D +ER D H++ + I Sbjct: 121 HAFVCGGFQPDLTVIFDLPVAVGLARAGRR-----GGGEDRYERMDPAFHQRLFDRYHAI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 A P+RC ++++ + ++V + W +V +R L+ ++ Sbjct: 176 ASAFPERCRLIEADGAIEAVHARL----WAVVLERFPELTERR 214 >gi|298486225|ref|ZP_07004288.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159232|gb|EFI00290.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 210 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDALLPQLLELR 208 >gi|320325316|gb|EFW81383.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. B076] Length = 210 Score = 148 bits (374), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAVAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|296131635|ref|YP_003638882.1| thymidylate kinase [Thermincola sp. JR] gi|296030213|gb|ADG80981.1| thymidylate kinase [Thermincola potens JR] Length = 211 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 79/192 (41%), Positives = 112/192 (58%), Gaps = 1/192 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG +GAGKTT + + LQ K Y+V +TREPGGT E+ R +LL + Sbjct: 2 TGKFITFEGPDGAGKTTQMKRAAQALQEKGYEVILTREPGGTEIGESIRSILLDP-QNRM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR HVE +I PAL GK++LCDRF DS+ AYQG L+ + Sbjct: 61 SHRTEALLYAAARAQHVEELILPALQAGKVVLCDRFADSTLAYQGYGRGINLNLLNIVNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ + PD TIILDL +GL R++N+ D E + V H++ R+ FL IA Sbjct: 121 LAIGSLKPDLTIILDLDPQVGLNRIRNKRLAVAGETEDRIEMEKVEFHQRVREGFLSIAL 180 Query: 183 NQPDRCHIVDSA 194 P R I+ + Sbjct: 181 QDPGRYKIIAAG 192 >gi|325275807|ref|ZP_08141675.1| thymidylate kinase [Pseudomonas sp. TJI-51] gi|324099059|gb|EGB97037.1| thymidylate kinase [Pseudomonas sp. TJI-51] Length = 210 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ P T++ DLPV++GL R R LD FE++ + RQ +L A+ Sbjct: 122 FVQGDLRPQLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFQAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R ++D+A +V I ++ +V++ Sbjct: 176 REPQRYSLLDAAQPLPAVQRAIDALLPAIVER 207 >gi|229592102|ref|YP_002874221.1| thymidylate kinase [Pseudomonas fluorescens SBW25] gi|259494277|sp|C3K0M9|KTHY_PSEFS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229363968|emb|CAY51499.1| thymidylate kinase [Pseudomonas fluorescens SBW25] Length = 210 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R VLL+ G ++ Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G +++CDRF DS+YAYQG + +L+ Sbjct: 62 NPDTELLLVFAARAQHLAEVIRPALARGAVVICDRFTDSTYAYQGGGRGLSLARIATLET 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE + + R FL A Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARASAR------GRLDRFELEGQAFFDAVRTAFLTRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P+R +++D+A V I ++ L+++ Sbjct: 176 AEPERYYLLDAAQPLAHVQQAIDALLPTLLER 207 >gi|221632235|ref|YP_002521456.1| thymidylate kinase [Thermomicrobium roseum DSM 5159] gi|254808313|sp|B9KXL4|KTHY_THERP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221155655|gb|ACM04782.1| thymidylate kinase [Thermomicrobium roseum DSM 5159] Length = 210 Score = 148 bits (373), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 8/214 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKTT +LL L+ Y + VTREPGGTP E R LL+ + E Sbjct: 4 FITFEGPEGAGKTTQCALLAARLREAGYSLLVTREPGGTPLGETIREWLLAG--EALRPE 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++F AAR +HV + IRPAL G I+LCDR++DS+ AYQG +L L I+ Sbjct: 62 TEALLFTAARAEHVWDRIRPALERGTIVLCDRYVDSTLAYQGAGRGLDEGWLRELHRIAT 121 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 ++ PD TI+LD+PV++GL R + +A + +++++ H + R + A+ P Sbjct: 122 GDLWPDLTILLDVPVEVGLARRRA-----AAATITRLDQEELAFHRRVRAWYHAAAQRDP 176 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK-RVSP 218 R +VD+ + VA + V E++++ R SP Sbjct: 177 QRWRVVDATLPPEVVADAVWATVTEVMKRGRRSP 210 >gi|291296874|ref|YP_003508272.1| thymidylate kinase [Meiothermus ruber DSM 1279] gi|290471833|gb|ADD29252.1| thymidylate kinase [Meiothermus ruber DSM 1279] Length = 205 Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 11/202 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+FEG EGAGK+T LL +L+ K +V +TREPGGT +A R +LL D Sbjct: 2 KGLFITFEGPEGAGKSTQARLLAEWLRAKGREVVLTREPGGTRLGQAIRGLLLH--QDPM 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEAE ++++A R +H++ VI+PAL G I+LCDR+LDSS AYQG +L ++ + Sbjct: 60 CAEAEYLLYSADRAEHMQRVIQPALGLGHIVLCDRWLDSSLAYQGYGRGLDLGWLRAVAQ 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + Q + P T + DLP ++GL+R + R D ER+ + H + RQ +L++A+ Sbjct: 120 GATQGIRPHKTFLFDLPPEVGLERFEGR---------DRLEREPLEFHRRVRQGYLELAQ 170 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 +P+R ++D+ +++ T + Sbjct: 171 AEPERFVLLDATQPLEALHTQL 192 >gi|46203463|ref|ZP_00208978.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1] Length = 212 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 5/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T + LL L+ + V TREPGG+ AEA R +L+ + Sbjct: 6 GRFITFEGGEGAGKSTQVRLLADSLRDEGLMVVTTREPGGSTGAEAIRALLVEGDTARWD 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++ AAR DH+ + PAL G ++CDRF DS+ AYQG + SL + Sbjct: 66 GVTEALLHFAARRDHLLKTVWPALERGAWVICDRFADSTLAYQGFGHGLDPDVIASLYRV 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V PD T++LDLPV+ GL+R R D +ER + H++ RQ FL IA + Sbjct: 126 AVGHFAPDLTLVLDLPVETGLERAGAR-----GGAEDRYERMGLGFHQRLRQGFLGIAAS 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P RC ++D+ S V +I++ V Sbjct: 181 NPMRCAVIDATRSPDEVHGDIMSTV 205 >gi|90021281|ref|YP_527108.1| thymidylate kinase [Saccharophagus degradans 2-40] gi|89950881|gb|ABD80896.1| thymidylate kinase [Saccharophagus degradans 2-40] Length = 208 Score = 147 bits (372), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +++G FI+ EG EG GK+T+I L+K LQ+ ++ VTREPGGTP AE R+VLL+ + Sbjct: 2 ISTGKFITVEGTEGVGKSTNIELIKTLLQQAGIELVVTREPGGTPLAEELRNVLLANRDE 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AE +V AAR H+ VI+PAL GK +L DRF D+++AYQG+ + L Sbjct: 62 NFDPLAELLVVFAARAQHINQVIKPALAAGKWVLSDRFTDATFAYQGKGRGLPIQAILQL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ Q + PD T +LD+ V +GL+R RE LD FE + + EK R + + Sbjct: 122 EQMVQQGLQPDATFLLDIDVQVGLERA------RERGELDRFENEHITFFEKVRAGYHER 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R ++++ S ++V ++ V +L+ Sbjct: 176 VAATPERFMVINAGQSLEAVQQDVTLAVEKLL 207 >gi|254417944|ref|ZP_05031668.1| thymidylate kinase [Brevundimonas sp. BAL3] gi|196184121|gb|EDX79097.1| thymidylate kinase [Brevundimonas sp. BAL3] Length = 210 Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 84/218 (38%), Positives = 121/218 (55%), Gaps = 11/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G FISFEG EG+GK+T + L LQ V TREPGG+ AE R+++++ Sbjct: 1 MTRGKFISFEGGEGSGKSTQVGRLVERLQPVLGERTVVRTREPGGSKGAEVIRNLVVATE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + A E ++ A+R DH+E IRPAL G ++CDRF DSS AYQG F++ Sbjct: 61 AEPWSAMTETLLMYASRSDHLERTIRPALAAGDWVVCDRFADSSRAYQGAGGGVAQSFIE 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + V + PD T++ DLPV++GL+R R L E+ FE K + H++ R+ FL Sbjct: 121 QIDAGVVGDDQPDLTLVFDLPVEVGLERAFGR-GLFET----RFESKGLAFHKRLREGFL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 I P+RC ++D+ S V VW+ VQ R+ Sbjct: 176 RIVEAHPERCVLIDAVGSLDEVEAR----VWQAVQDRL 209 >gi|258513464|ref|YP_003189686.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771] gi|257777169|gb|ACV61063.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771] Length = 233 Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 86/187 (45%), Positives = 115/187 (61%), Gaps = 11/187 (5%) Query: 4 GLFISFEGIEGAGKTTHISLL-KRFLQR---KNYD-----VHVTREPGGTPAAEAARHVL 54 G+FI FEGI+G+GKTT I++L K LQ KN V +TREPGGT +E R++L Sbjct: 3 GVFIVFEGIDGSGKTTQINILYKNLLQHNRIKNQPAGSEYVLLTREPGGTATSELIRNIL 62 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 L+ D+ A EA+++AAAR HVE IRPAL GKI++CDRF+DSS AYQG Sbjct: 63 LNPANDKLCARTEALLYAAARAQHVEERIRPALSSGKIVICDRFIDSSLAYQGYGRGQDL 122 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 FL +L +++ + PD TI+LDLPV LKR+ NR D E + V +E+ R Sbjct: 123 SFLHNLNQLAAGGLKPDLTILLDLPVGAALKRLNNRQV--SGIEKDRLESEAVSFYERVR 180 Query: 175 QIFLDIA 181 + +L IA Sbjct: 181 EGYLKIA 187 >gi|254434496|ref|ZP_05048004.1| thymidylate kinase [Nitrosococcus oceani AFC27] gi|207090829|gb|EDZ68100.1| thymidylate kinase [Nitrosococcus oceani AFC27] Length = 213 Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI EGIEGAGK+T + +++ LQ +V VTREPGGT E R +LLS ++ Sbjct: 1 MGRGRFIVLEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E ++ AAR++HV+ VI PAL GK +LCDRF +SYAYQG + L Sbjct: 61 GMSADTELLLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ + PD ++ D+PV +GL+R R LD FE++ + ++ R I+L + Sbjct: 121 ESWALNCLRPDLILLFDVPVRLGLQRATTR-----CQQLDRFEQEKIDFFDRARTIYLSL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A+ PD+ ++DS+ V I ++ +++ Sbjct: 176 AKKYPDQYRLIDSSLPLTRVQEAIQKVIMAFLEE 209 >gi|85859637|ref|YP_461839.1| thymidylate kinase [Syntrophus aciditrophicus SB] gi|123516788|sp|Q2LUB1|KTHY_SYNAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|85722728|gb|ABC77671.1| thymidylate kinase [Syntrophus aciditrophicus SB] Length = 219 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 1/196 (0%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEGIEG GKTT + L ++L+ V T EPGGTP + R++LL+ G E AE Sbjct: 4 FISFEGIEGCGKTTQLKLAAQYLRTLKIPVGTTEEPGGTPLGKKIRNILLNRGPFEICAE 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++F AAR HV VI P+L G+ +LCDRF D++ YQG ++ L + Sbjct: 64 AETLLFVAARAQHVREVILPSLARGQWILCDRFSDATAVYQGCVRGIDEAWIRQLDSFAT 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P+ T++ DLP + GL R R + + E++ D FE++ + HEK R+ +L +AR + Sbjct: 124 SFLKPNLTLLFDLPAETGLHRAMQRMTGIPENSREDRFEQEGLNFHEKIREGYLALARQE 183 Query: 185 PDRCHIVDSAHSFQSV 200 +R I+++A S+ Sbjct: 184 SERFRIINAAADIPSI 199 >gi|118580087|ref|YP_901337.1| dTMP kinase [Pelobacter propionicus DSM 2379] gi|166223097|sp|A1APK9|KTHY_PELPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118502797|gb|ABK99279.1| thymidylate kinase [Pelobacter propionicus DSM 2379] Length = 219 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 3/217 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG+GKTT I LL L+ Y V +TREPGG ++ R +LL Sbjct: 2 GYFITFEGIEGSGKTTQIGLLGEQLESLGYSVVMTREPGGCAISDKIRSILLDADNSSIS 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR HV VI PAL +G I+LCDRF D++ AYQG +D+L ++ Sbjct: 62 PMTELLLYAAARAQHVSEVIIPALKQGNIVLCDRFSDATLAYQGSGRGIAREKVDTLNQL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q + PD T+++D V +GL+R + R + FE + + H R+ +L++A Sbjct: 122 ACQSLRPDLTVLIDCDVSVGLERARRRIETASGPREERFELEALEFHRSVREAYLELAHA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 +P R VD + + ++ IV +++Q R++ S Sbjct: 182 EPQRFITVDGSGGVEEISE---AIVAQVLQNRLNNTS 215 >gi|307826061|ref|ZP_07656274.1| thymidylate kinase [Methylobacter tundripaludum SV96] gi|307732900|gb|EFO03764.1| thymidylate kinase [Methylobacter tundripaludum SV96] Length = 223 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GKTT+++ +K +L++ N V VTREPGGT AE R +LL + Sbjct: 1 MIRGKFITLEGCEGVGKTTNMAFIKDYLEQHNISVVVTREPGGTKLAEKIRQLLLDNKSE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +AE ++ AAR H+++VI PAL +GK +LCDRF D++YAYQG + + + L Sbjct: 61 TISEQAELLMMFAARAQHIKHVIEPALAQGKWVLCDRFTDATYAYQGGGRNMKISTIKWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T++LD P++IG+ RV RE LD FE + + E R+ +L Sbjct: 121 ENLVQGTLRPDLTLLLDAPIEIGIARV------RERGALDRFELEKISFFENVRRAYLLQ 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P+R ++ + V I +++ L+ Sbjct: 175 AELYPERIKLIKANQPLIDVQRAITDVIRTLL 206 >gi|229823580|ref|ZP_04449649.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271] gi|229787024|gb|EEP23138.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271] Length = 210 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG +GAGK++ I+ L +L+ + + V TREPGG P AE R V+L Sbjct: 1 MFPGKFITLEGPDGAGKSSVIAELTAYLEGQGHQVLTTREPGGVPIAEEIRRVILDVDHI 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119 EA++FAAAR H+ VI PAL +GKI+LCDRF+DSS AYQG RD L S Sbjct: 61 AMDPRTEALLFAAARRQHLVEVILPALRQGKIVLCDRFVDSSLAYQGMARDIPVDLIW-S 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +V++ +P T+++D+P ++GL R+ R+ D +++ + H + RQ FLD Sbjct: 120 INQFAVEDQLPALTLLIDVPAEVGLARIHQARGQRQ---YDRLDQESLDFHNRVRQAFLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A+ P+R ++D V ++++ Sbjct: 177 LAQASPERIKVIDGQAPLDQVVAACIDVL 205 >gi|99078562|ref|YP_611820.1| thymidylate kinase [Ruegeria sp. TM1040] gi|99035700|gb|ABF62558.1| thymidylate kinase [Ruegeria sp. TM1040] Length = 214 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 120/215 (55%), Gaps = 6/215 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLF++FEGI+G+GK++ LL L+ +V +TREPGG+ AE R ++L D Sbjct: 6 GSGLFLTFEGIDGSGKSSQCRLLAEHLRGLGREVVLTREPGGSEGAEEIRRLVLEGDPDR 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L Sbjct: 66 WSAETEILLFTAARRDHLERTILPALSAGKVVICDRFADSTRMYQGLSRGDLRATVDELH 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI++D+ + GL R + R E FE + + EK R FL +A Sbjct: 126 ALMIGR-EPDVTILIDMDPETGLARAKGRQGTEE-----RFEDFGLALQEKMRAGFLALA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 DR IVD A +VA ++ IV +++RV Sbjct: 180 DEFADRFRIVDGARDMDAVAADVARIVEAELEQRV 214 >gi|331012636|gb|EGH92692.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 210 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF + EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFFTLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|182415140|ref|YP_001820206.1| dTMP kinase [Opitutus terrae PB90-1] gi|177842354|gb|ACB76606.1| dTMP kinase [Opitutus terrae PB90-1] Length = 216 Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVD 60 +G ISFEG EG+GK+T +S+L LQ+ DV TREPGGT E R++++ S G D Sbjct: 9 TGKLISFEGSEGSGKSTQMSMLAARLQKDGRDVVTTREPGGTEIGEQVRNIIVHNSRG-D 67 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E AE E ++FAAAR V VI PA+ +G I+L DR+LDSS YQG ++L D + Sbjct: 68 EMCAETELLLFAAARAQLVREVIAPAMQKGSIVLSDRYLDSSTVYQG---IGRNLAADPV 124 Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +I +V VMPD TI++D+P ++GL R++ R S D ER+++ ++K R + Sbjct: 125 AQINRFAVGNVMPDLTIVIDVPAEVGLARIRQ----RASDLPDRMERENIDFYKKVRDGY 180 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 L +A+ DR ++D + V+ I V E Sbjct: 181 LVLAKGMADRFVVIDGTQTQDVVSKKIFAAVKE 213 >gi|70729185|ref|YP_258921.1| thymidylate kinase [Pseudomonas fluorescens Pf-5] gi|123656957|sp|Q4KFR2|KTHY_PSEF5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|68343484|gb|AAY91090.1| thymidylate kinase [Pseudomonas fluorescens Pf-5] Length = 210 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ +V +TREPGGTP AE R VLL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVLLTREPGGTPLAERIRDVLLTPVEEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF DS+YAYQG + +L++ Sbjct: 62 NADTELLLVFAARAQHLATVIRPALERGAVVLCDRFTDSTYAYQGAGRGLSLARIAALED 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T++ DLPVD+GL R R LD FE++ +K R+ FL A Sbjct: 122 FVQGELRPDLTLVFDLPVDVGLARASAR------GRLDRFEQEGQAFFQKVREAFLARAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R +VD+A V ++ +++ +L+++ Sbjct: 176 AAPQRYVLVDAAQPLAQVQQSLDSLLPQLLER 207 >gi|146306664|ref|YP_001187129.1| thymidylate kinase [Pseudomonas mendocina ymp] gi|166223105|sp|A4XST1|KTHY_PSEMY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145574865|gb|ABP84397.1| thymidylate kinase [Pseudomonas mendocina ymp] Length = 210 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLREQGVDVVLTREPGGTPLAERIRELLLDPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H++ VIRPAL +G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLQQVIRPALAKGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T+I DLPV++GL R R LD FE++ E RQ +L A Sbjct: 122 FVQGELRPDLTLIFDLPVEVGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAV 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P ++D+ + V +I ++ L++ Sbjct: 176 QAPQHYRVLDAGQTLAQVQADIDALLPSLLE 206 >gi|302390839|ref|YP_003826659.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501] gi|302202916|gb|ADL11594.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501] Length = 210 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG EGAGK+T I LL ++ + Y+V TREPGGT R++LL +D Sbjct: 3 GLFITLEGPEGAGKSTQIELLNKYFSEQGYEVVQTREPGGTEIGSRIRNILLDSNLDNLE 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 + E +++AA+R HV VI+PAL EGK+++CDRF D++ AYQG R + L L L + Sbjct: 63 PKTELLLYAASRAQHVNEVIKPALKEGKVIICDRFSDATLAYQGYGRRLDKDLIL-KLNQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + PD T +LD+ + GL R +N D ER+D+ H++ R +L +A Sbjct: 122 MATGGLEPDLTFLLDIEPEEGLLRTKNE-------VRDRIEREDLSFHQQVRDGYLKLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + R ++D + S +++ N++ + E ++ Sbjct: 175 KKS-RFEVIDGSQSIENIFDNLIETLEERLE 204 >gi|297572230|ref|YP_003698004.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595] gi|296932577|gb|ADH93385.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595] Length = 219 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 10/214 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FISFEG +GAGK+T + L +L+ Y V VTREPGGT RH+LL G + Sbjct: 2 GMFISFEGGDGAGKSTQVEKLATWLREAGYGVVVTREPGGTELGAHIRHLLLHGG--DVS 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R H++ IRPAL G+I++ DRF+DSS AYQG S + L Sbjct: 60 PRAEALLYAADRAHHMDTKIRPALERGEIVITDRFMDSSIAYQGAARSLGKNEIRDLSLW 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V+ MPD T +LD+PV+ G RV + E+A ++ H + R FL +A + Sbjct: 120 AVEGTMPDVTFLLDIPVETGQARVGSEQDRLEAAGAEF--------HARVRNEFLALAED 171 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 DR ++D + S+A +I + V E + K S Sbjct: 172 HMDRWRVLDGTQTIDSIAQSIRHHVAEALAKNDS 205 >gi|117929178|ref|YP_873729.1| thymidylate kinase [Acidothermus cellulolyticus 11B] gi|117649641|gb|ABK53743.1| thymidylate kinase [Acidothermus cellulolyticus 11B] Length = 688 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 83/218 (38%), Positives = 120/218 (55%), Gaps = 15/218 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++FEG EGAGK+T + LL R+L + Y+V V+REPGGTP R +LL Sbjct: 464 TGFFVAFEGGEGAGKSTQVELLARYLADRGYEVVVSREPGGTPLGHRLREILLDPREPAP 523 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 AEA+++AA R +HV VIRPAL G I++ DR++DSS AYQ G RD S ++ L Sbjct: 524 SPRAEALLYAADRAEHVAKVIRPALARGAIVISDRYVDSSLAYQGGGRDLSPR-DVEQLS 582 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T++LD+P D GL R R D + +D HE+ R +F A Sbjct: 583 RFATSGLRPDLTVLLDVPPDEGLARTG-----RRDRAPDRLQAEDAAFHERVRNVFRQRA 637 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 P+R ++D+ S + LV +R+ P+ Sbjct: 638 EADPERYLVIDARLSAADIH--------RLVVQRILPV 667 >gi|254464514|ref|ZP_05077925.1| thymidylate kinase [Rhodobacterales bacterium Y4I] gi|206685422|gb|EDZ45904.1| thymidylate kinase [Rhodobacterales bacterium Y4I] Length = 215 Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+FEGI+G+GK+T LL L+ DV +TREPGG+P AE R ++L D Sbjct: 6 TRGLFITFEGIDGSGKSTQCRLLAEALRAAGRDVVLTREPGGSPGAEEIRRLVLEGDPDR 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D + Sbjct: 66 WSAETELLLFMAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRAAVDQMH 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+++D+ GL R + R E FE V + EK R FL +A Sbjct: 126 RLMIGR-EPDLTLLIDMDPAEGLARAKGRQGKEE-----RFEDFGVELQEKMRAGFLALA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + DR +VD A + VA ++ + + ++ Sbjct: 180 QEFADRFRVVDGARPVEEVAADVRRLAEDALE 211 >gi|291614001|ref|YP_003524158.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1] gi|291584113|gb|ADE11771.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1] Length = 202 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 121/208 (58%), Gaps = 9/208 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ FI+FEG++GAGK+TH+ L+++ D+ VTREPGGT E R +LL+ + Sbjct: 1 MSTAKFITFEGVDGAGKSTHLDWFANVLRQRGIDLLVTREPGGTQLGERLREILLNQPMH 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE EA++ AAR +HVE VIRPAL G ++ DRF D+S+AYQG L+ L Sbjct: 61 ---AETEALLMFAARREHVEQVIRPALQRGTWVISDRFSDASFAYQGGGRGVPVAKLEQL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ ++ PD T++ D+P++I +R+ N +A LD FE++ E+ RQ +L Sbjct: 118 EQWVHGDIQPDLTLLFDIPIEIARQRLSN------NASLDRFEQEQGEFFERVRQAYLSR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R ++ + S V ++ IV Sbjct: 172 AAKTPHRFAVIHAEKSMDEVKQDLAKIV 199 >gi|94986082|ref|YP_605446.1| thymidylate kinase [Deinococcus geothermalis DSM 11300] gi|94556363|gb|ABF46277.1| Thymidylate kinase [Deinococcus geothermalis DSM 11300] Length = 210 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 85/218 (38%), Positives = 119/218 (54%), Gaps = 15/218 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCG 58 M GLF++FEG EGAGK+T ++ L + L TREPGGTP R VLL + Sbjct: 1 MRPGLFVTFEGPEGAGKSTQLARLAQRLAETGRPPVTTREPGGTPLGMRVREVLLDPALT 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +D E ++++A+R V +VIRPAL G+++LCDR+ DSS AYQG FL Sbjct: 61 IDPL---PEFLLYSASRAQLVRDVIRPALAAGQVVLCDRYADSSLAYQGSGRGLDPAFLA 117 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L + PD TI+LDL +GL R +R D ER D+ H + R FL Sbjct: 118 ALTGEVTGGLQPDLTILLDLDPALGLARAASR------GQPDRLERADLTFHRRVRHGFL 171 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 D+A P+R ++D+A S+A +I W VQ+R+ Sbjct: 172 DLAAQAPERFLVLDAARDPDSLAADI----WRAVQERL 205 >gi|323701668|ref|ZP_08113340.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574] gi|323533441|gb|EGB23308.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574] Length = 215 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI FEG++G+GKTT +SLL ++L + + TREPGGTP E R +LL+ + Sbjct: 11 GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPGGTPLGEKIRELLLNPDFIDMQ 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA+++AAAR V IRP L +G ++LCDR++DSS AYQG FL + ++ Sbjct: 71 SRTEALLYAAARAQLVAQEIRPRLQQGTVVLCDRYIDSSLAYQGYGRGMDIDFLIKINQL 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + P I+LDLP + GL R R+ D E + + H + R +L++AR Sbjct: 131 GTGGLNPQLVILLDLPPEEGLIRS------RKVGPADRLENEALDFHRRVRAGYLELARK 184 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR ++D+ S Q++ I +V +V Sbjct: 185 NPDRYLVLDARESIQTLHQEICRVVGGMV 213 >gi|312962561|ref|ZP_07777051.1| Thymidylate kinase [Pseudomonas fluorescens WH6] gi|311283141|gb|EFQ61732.1| Thymidylate kinase [Pseudomonas fluorescens WH6] Length = 210 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R VLL+ G ++ Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G +++CDRF DS+YAYQG + +L+ Sbjct: 62 NPDTELLLVFAARAQHLSEVIRPALARGAVVICDRFTDSTYAYQGGGRGLCLARIATLES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++G+ R R LD FE + + R FL A+ Sbjct: 122 FVQGDLRPDLTLLFDLPVEVGMARASAR------GRLDRFELEGQAFFDLVRSAFLARAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R H++D++ V I ++ L+++ Sbjct: 176 AEPARYHLLDASQPLAQVQQAIDALLPLLLER 207 >gi|297616259|ref|YP_003701418.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680] gi|297144096|gb|ADI00853.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680] Length = 223 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 7/214 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ FISFEGI+GAGKTT + LL R L + V REPG TP +E R +LL Sbjct: 1 MHRKCFISFEGIDGAGKTTQVELLYRKLMDVGFSVVAVREPGSTPLSEKIRELLLDVRNQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + AE+ ++AAAR V +I+PAL GK+++ DR++DS+ AYQG FL L Sbjct: 61 DISSSAESFLYAAARSQLVAEIIKPALDAGKVVIADRYVDSTIAYQGYGRGMDIEFLKRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +MP TI+LDLP + G+ R R LD ER+ + H R+ +L + Sbjct: 121 NLLATGGLMPCLTILLDLPPEEGIAR-------RGELPLDRLEREGIGFHRAVREGYLTL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R++PDR +VD+ + V IL V E +++ Sbjct: 174 SRSEPDRIMVVDARLQVEDVHEQILKRVLERLRR 207 >gi|260426355|ref|ZP_05780334.1| thymidylate kinase [Citreicella sp. SE45] gi|260420847|gb|EEX14098.1| thymidylate kinase [Citreicella sp. SE45] Length = 208 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 81/203 (39%), Positives = 117/203 (57%), Gaps = 6/203 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFISFEGI+G+GK+T LL L+ ++V +TREPGG+P AE R ++L D Sbjct: 4 GTGLFISFEGIDGSGKSTQARLLAEQLRGDGHEVVLTREPGGSPGAEEIRALVLQGDPDR 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I+PAL G ++CDRF DS+ YQG +D+L Sbjct: 64 WSAETELLLFTAARRDHLERTIQPALARGATVICDRFADSTRMYQGLSRGDLRAAVDALH 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + V PD TI++D+ L R + R + E FE + + EK R FL +A Sbjct: 124 ERMIG-VEPDLTILIDMDPAAALPRAKARATAEE-----RFEDFGLPLQEKMRAGFLALA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 PDR I+D + ++VA ++ Sbjct: 178 AEFPDRFRIIDGNRAPEAVARDV 200 >gi|56551986|ref|YP_162825.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543560|gb|AAV89714.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4] Length = 216 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G FIS EG EG GK+T I LL L+ K V TREPGG +A RH+LL + Sbjct: 7 VTHGYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDL 66 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA++FAAAR +HV VI+PAL EGK ++CDRF+DSS AYQG+ + Sbjct: 67 HRWTNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQGDIRC 126 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L I Q ++PD T +L LP G++R Q R+ + FE++ + H+K FL Sbjct: 127 LHRIGSQGILPDRTFLLTLPEGEGIRRAQE----RDKNKGNRFEQRTIDYHKKVNDSFLQ 182 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 +A +P+R ++D++ + + V Sbjct: 183 LAAKEPERFRVIDASGNPEEV 203 >gi|83311549|ref|YP_421813.1| thymidylate kinase [Magnetospirillum magneticum AMB-1] gi|82946390|dbj|BAE51254.1| Thymidylate kinase [Magnetospirillum magneticum AMB-1] Length = 212 Score = 145 bits (366), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 5/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T + LL L+ + V TREPGG+ AEA R +L+ + + Sbjct: 6 GRFITFEGGEGAGKSTQVRLLAESLRDEGLMVVTTREPGGSAGAEAIRALLVEGEPERWD 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++ AAR DH+ + PAL G ++CDRF DS+ AYQG + SL + Sbjct: 66 GVTEALLHFAARRDHLVKTVWPALDRGAWVICDRFADSTLAYQGFGHGLDPDVIASLYRV 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V PD T++LDLPV+ GL+R R D +ER + H++ RQ FL IA Sbjct: 126 AVGHFAPDLTLVLDLPVEKGLERAGLR-----GGAEDRYERMGLGFHQRLRQGFLGIAAA 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P RC ++D+ S V +I++ V Sbjct: 181 NPMRCAVIDATRSPDEVHGDIMSTV 205 >gi|212703732|ref|ZP_03311860.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098] gi|212672884|gb|EEB33367.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098] Length = 217 Score = 145 bits (365), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 3/217 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GKTT LL L+++ +DV +TREPGG A R +LL Sbjct: 1 MFITFEGIEGSGKTTAQQLLALELEKRGHDVLLTREPGGCGLGRALRPILLDARNAGLCN 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R HV ++RPAL G+I++CDR+ DS+ AYQG L +++ Sbjct: 61 RAELYLFLADRAQHVAEIVRPALEAGQIVICDRYTDSTLAYQGYGRGRDPDRLRRANDLA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182 + PD T++ DLPV +GL+R R + RE L F+ + + HE+ RQ +L IA Sbjct: 121 TGGLQPDLTLLCDLPVSVGLERAGLR-NRREGTVLSEGRFDSESLNFHERVRQGYLTIAE 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 +PDR I+D++ + V L+ V +++R S L Sbjct: 180 EEPDRIAIIDASQQPEDVVLQCLSAVERHLKRRGSGL 216 >gi|114799318|ref|YP_760517.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444] gi|114739492|gb|ABI77617.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444] Length = 219 Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G FI+ EG EG GK+T L R L+ V VTREPGGTP AEAAR +LL E Sbjct: 6 AGHFITLEGGEGTGKSTLAKALARKLEAHGIGVVVTREPGGTPLAEAARQLLLHPPEGEA 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +EA++ AAR DH+E +IRPAL G ++CDRF DS+ YQ L S++ Sbjct: 66 WSPLSEALLVNAARRDHLEKLIRPALARGDWVICDRFADSTRVYQSIEGGVDVSALLSIE 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + +P T+ILD+ +D+ KR R + LD FER+ HE R F DIA Sbjct: 126 REVLGDTVPSMTLILDVSLDVASKRRTAR-----AGALDTFERRPKAFHEAVRAAFQDIA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R++P RC ++D+ +L+ W+ V Sbjct: 181 RSEPARCRLIDT----DVTPDQVLDAAWKQV 207 >gi|192362258|ref|YP_001982459.1| thymidylate kinase [Cellvibrio japonicus Ueda107] gi|190688423|gb|ACE86101.1| thymidylate kinase [Cellvibrio japonicus Ueda107] Length = 213 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG F++ EG EG GK+T+++ ++ +L+ + ++ VTREPGGTP AE R++LL+ + Sbjct: 6 MQSGKFLTMEGTEGVGKSTNLAFVRAWLEARGIELIVTREPGGTPLAEEIRNLLLAKRTE 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++ AAR H+ VI+PAL G +L DRF D++YAYQG ++ L Sbjct: 66 PVDETAELLLVFAARAQHLAQVIKPALARGAWVLSDRFTDATYAYQGGGRGLSLAIIEQL 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + Q++ PD T++LD+ V GL+R R A LD FE + + E+ R + Sbjct: 126 ENLVQQQLRPDLTLVLDIDVQKGLERASQR------AELDRFESESLAFFERVRAAYHSR 179 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A P+R ++D+ S + V +I + +L+Q Sbjct: 180 AAMAPERYTLIDAGQSLERVQQDIAARLEQLIQ 212 >gi|189425005|ref|YP_001952182.1| dTMP kinase [Geobacter lovleyi SZ] gi|254808293|sp|B3E2K5|KTHY_GEOLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189421264|gb|ACD95662.1| dTMP kinase [Geobacter lovleyi SZ] Length = 212 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 115/205 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T I+LL LQ+ V +TREPGG P A+ R VLL Sbjct: 1 MFITFEGIEGCGKSTQIALLAASLQQAGQRVLLTREPGGCPIADQIRSVLLDAANTALVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++AA+R H+ V+ PAL EG I+LCDRF D++ AYQ +++L ++ Sbjct: 61 MAELMLYAASRAQHLAEVVSPALAEGVIVLCDRFSDATRAYQSFGRGIDRQVIETLNSLA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T++LD PV+ GL R + R + FE + + H++ R +L +A + Sbjct: 121 CDGISPDLTVLLDCPVETGLGRARQRIDSTSGPREERFELESLAFHQRVRDGYLQLAAEE 180 Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209 P R IVD+ VA+ I + V Sbjct: 181 PGRFVIVDATVQPAQVASAISDAVL 205 >gi|329850687|ref|ZP_08265532.1| thymidylate kinase [Asticcacaulis biprosthecum C19] gi|328841002|gb|EGF90573.1| thymidylate kinase [Asticcacaulis biprosthecum C19] Length = 218 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 9/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G FI FEG EGAGK+T + L + L+ +V TREPGG+P AE R++L+ Sbjct: 7 STGRFIVFEGGEGAGKSTQVQALVKRLRDFGLEVVQTREPGGSPGAEVLRNLLVQGDAGR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +E ++ AAR DH+E VIRPAL G ++CDRF DSS AYQG F++ + Sbjct: 67 WSPMSETLMMYAARSDHLETVIRPALERGAWVVCDRFADSSRAYQGAGGGVAPEFIEQID 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V + PD ++LD+PV+ GL R R + FE K + HE+ RQ FL+ A Sbjct: 127 AAVVGDTQPDLVLVLDMPVEAGLARASARGDKE-----NRFESKGLAFHERLRQGFLNRA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R + ++ + + N +W ++ + Sbjct: 182 AKVPERYRVFNADQPIEP----LFNDIWRVMAR 210 >gi|241761931|ref|ZP_04760016.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373611|gb|EER63183.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 216 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G FIS EG EG GK+T I LL L+ K V TREPGG +A RH+LL + Sbjct: 7 VTHGYFISLEGGEGVGKSTQIRLLVAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDL 66 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA++FAAAR +HV VI+PAL EGK ++CDRF+DSS AYQG+ + Sbjct: 67 HRWTNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQEDIRC 126 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L I Q ++PD T +L LP G++R Q R+ + FE++ + H+K FL Sbjct: 127 LHRIGSQGILPDRTFLLTLPEGEGIRRAQE----RDKNKGNRFEQRTIDYHKKVNDSFLQ 182 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 +A +P+R ++D++ + + V Sbjct: 183 LAAKEPERFRVIDASGNPEEV 203 >gi|134297938|ref|YP_001111434.1| dTMP kinase [Desulfotomaculum reducens MI-1] gi|172044205|sp|A4J0K6|KTHY_DESRM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|134050638|gb|ABO48609.1| thymidylate kinase [Desulfotomaculum reducens MI-1] Length = 207 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 73/200 (36%), Positives = 117/200 (58%), Gaps = 6/200 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEG++G+GK+T ++LL ++L +K TREPGGTP E R +LL E Sbjct: 4 IFIVFEGVDGSGKSTQLNLLNKYLSQKEIKTICTREPGGTPVGEKIRELLLDPNFAEIQD 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++++AAR V VIRP L +G ++LCDR++DS+ AYQG FL + E++ Sbjct: 64 RTEALLYSAARAQLVAQVIRPQLEQGTVVLCDRYIDSTLAYQGYGRGMDISFLAQINELA 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +MP+ TI+LDLP + GL+R R+ D E + + + K R +L++A+ + Sbjct: 124 SGGLMPNITILLDLPPEEGLQRS------RKDRPADRLENESLTFYHKVRSGYLEMAKRK 177 Query: 185 PDRCHIVDSAHSFQSVATNI 204 PD ++D+ + + + I Sbjct: 178 PDTYLVLDARQTMEQLHRQI 197 >gi|299536748|ref|ZP_07050058.1| thymidylate kinase [Lysinibacillus fusiformis ZC1] gi|298727862|gb|EFI68427.1| thymidylate kinase [Lysinibacillus fusiformis ZC1] Length = 209 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNS LFI+FEG EGAGKTT I ++ + L KN +V TREPGG AE R ++L+ Sbjct: 1 MNSNLFITFEGPEGAGKTTVIQMIAKRLTEKNIEVLATREPGGIEIAEKIRTIILNPAHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H +RPAL GK+++CDRF+DSS AYQG + S+ Sbjct: 61 AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQGYARGIGVNEVLSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + +PD TI+ DL ++GL R+ + RE LD + + H+K R+ +L + Sbjct: 121 NEFAIGKKLPDVTILFDLAPEVGLARIHATGN-REVNRLDV---ESLPFHQKVREGYLQL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +V++ ++V ++ ++ E +Q Sbjct: 177 VEQYPERIRVVNADQDIENVVEDVWLLLLEAMQ 209 >gi|254293993|ref|YP_003060016.1| thymidylate kinase [Hirschia baltica ATCC 49814] gi|254042524|gb|ACT59319.1| thymidylate kinase [Hirschia baltica ATCC 49814] Length = 211 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 126/218 (57%), Gaps = 10/218 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 MN G F++ EG EG GK+T S L++ L + +TREPGG+ EA R+++L+ Sbjct: 1 MNLGRFVTLEGGEGVGKSTLASNLQKKLLELDIKCLLTREPGGSLGGEAIRNIVLNPPHH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ + ++F AAR DH+ENVI+PAL+ G+ ++CDRF DS+ AYQ + + Sbjct: 61 QDWSPLTQTLLFFAARCDHLENVIKPALLRGEWVICDRFTDSTRAYQAVAGGVDDHVVST 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L ++ V E PD T++LD+P+++ KR + + D FE+ HE RQ FL+ Sbjct: 121 LDQLVVNEQQPDLTLLLDMPLEVSAKR-----RIERNGPQDAFEKLPQSFHENVRQAFLE 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 IA DRC+++D+++S V L EL+ KR S Sbjct: 176 IADRYKDRCYVLDASNSVDQVTAEAL----ELICKRFS 209 >gi|330718537|ref|ZP_08313137.1| thymidylate kinase [Leuconostoc fallax KCTC 3537] Length = 217 Score = 144 bits (363), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 82/220 (37%), Positives = 126/220 (57%), Gaps = 13/220 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ FISFEG EGAGKT+ + +L+ D+ TREPGG P AEA R +L Sbjct: 1 MSEAKFISFEGPEGAGKTSVLQALIGELGPMLGDDLVTTREPGGNPIAEAIRAILQPEED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118 + EA+++AAAR H+ I+PAL GK+++ DR++DSS AYQG + L +D Sbjct: 61 NGMDKRTEALLYAAARRQHLVETIQPALAAGKVVISDRYIDSSLAYQG---GGRDLGVDR 117 Query: 119 --SLQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQ 175 +L + + + ++PD TI LD+P DIGLKRV Q+R +D +++D+ H K R Sbjct: 118 IWTLNQFATEGLLPDLTIYLDVPADIGLKRVMQHR-----QGKIDRLDKEDLSFHIKVRN 172 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L + PDR ++D+ + V T ++W+ ++ R Sbjct: 173 TYLALRDQFPDRIQVIDATQPLEMVITATRALIWQQLKNR 212 >gi|86136161|ref|ZP_01054740.1| thymidylate kinase [Roseobacter sp. MED193] gi|85827035|gb|EAQ47231.1| thymidylate kinase [Roseobacter sp. MED193] Length = 218 Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 113/204 (55%), Gaps = 6/204 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEGI+G+GK+T L L+ YDV +TREPGG+ AE R ++L D++ Sbjct: 6 TGLFLTFEGIDGSGKSTQCKRLAETLRLAGYDVVLTREPGGSEGAEEIRRMVLEGDPDKW 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L Sbjct: 66 SAETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRTTVDQLHT 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+++D+ GL R + R E FE + + EK R FL +A Sbjct: 126 LMIGR-EPDLTLLIDMDPATGLSRAKGRQGTEE-----RFEDFGLGLQEKMRAGFLSLAE 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206 R +VD A +VA ++L Sbjct: 180 EFSTRFRVVDGAQDIDTVAADVLR 203 >gi|297242601|ref|ZP_06926540.1| thymidylate kinase [Gardnerella vaginalis AMD] gi|296889410|gb|EFH28143.1| thymidylate kinase [Gardnerella vaginalis AMD] Length = 239 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 16/216 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFISFEGI+G GKTT + LK +LQ +V VTREPGGT + R +LL Sbjct: 33 NKGLFISFEGIDGVGKTTQVEALKDYLQSSGREVVVTREPGGTQLGKTLREILLHGT--S 90 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118 A EA++FAA R HV VIRPAL G +++ DR++DSS AYQ + L +D Sbjct: 91 VSARTEALLFAADRAQHVAQVIRPALNRGAVVITDRYIDSSLAYQA---GGRELTMDDVR 147 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L E + + P+ T +LD+ + KR+ ESA +D+ R R+ FL Sbjct: 148 TLSEWATDSLWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRT--------REAFL 199 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D+A+ DR ++D+ S +S++ I+ V L+++ Sbjct: 200 DLAQESADRYRVLDATFSAKSLSELIVQDVHNLIEE 235 >gi|330891466|gb|EGH24127.1| thymidylate kinase [Pseudomonas syringae pv. mori str. 301020] Length = 189 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/193 (40%), Positives = 111/193 (57%), Gaps = 6/193 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAH 195 P R +VD+A Sbjct: 176 ADPARYRLVDAAQ 188 >gi|259415239|ref|ZP_05739161.1| thymidylate kinase [Silicibacter sp. TrichCH4B] gi|259349149|gb|EEW60903.1| thymidylate kinase [Silicibacter sp. TrichCH4B] Length = 214 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 117/214 (54%), Gaps = 6/214 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++FEGI+G+GK++ LL L+ +V TREPGG+ AE R ++L D Sbjct: 6 GPGLFLTFEGIDGSGKSSQCRLLADHLRGLGREVVQTREPGGSAGAEEIRSLVLEGDPDR 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +DSL Sbjct: 66 WSAETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRATVDSLH 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD TI++D+ + GL R + R E FE + + EK R FL +A Sbjct: 126 KLMIGR-EPDVTILIDMDPETGLARAKGRQGTEER-----FEDFGLALQEKMRAGFLSLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 DR IVD A +VA +I I + +R Sbjct: 180 DEFADRFRIVDGAQDMNAVAADIARIAEAELDQR 213 >gi|163732222|ref|ZP_02139668.1| thymidylate kinase [Roseobacter litoralis Och 149] gi|161394520|gb|EDQ18843.1| thymidylate kinase [Roseobacter litoralis Och 149] Length = 212 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/207 (38%), Positives = 120/207 (57%), Gaps = 6/207 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLFISFEGI+G+GK+T L L+ + ++V TREPGG+P AE R ++L D Sbjct: 7 DNGLFISFEGIDGSGKSTQSKRLAEHLRVRGHEVVETREPGGSPGAEEIRALVLQGDPDR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+ YQG +D+L Sbjct: 67 WSAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLH 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD T+++D+ IGL R +R + E FE + K R FL +A Sbjct: 127 DLMIGR-EPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQAKMRAGFLALA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + R +VD SV +++N+V Sbjct: 181 QEFKARFRLVDGGRDADSVTQDVINVV 207 >gi|254455158|ref|ZP_05068593.1| thymidylate kinase [Octadecabacter antarcticus 238] gi|198263568|gb|EDY87840.1| thymidylate kinase [Octadecabacter antarcticus 238] Length = 215 Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 82/201 (40%), Positives = 112/201 (55%), Gaps = 10/201 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEGI+G+GK+T LLK L D +TREPGG+ AE R +LL+ D + Sbjct: 14 GLFISFEGIDGSGKSTQTKLLKDRLP----DAVLTREPGGSAGAEEIRALLLTGDPDRWS 69 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E IRPAL GK ++CDRF DS+ YQG + +D+L ++ Sbjct: 70 AETEILLFTAARRDHLEKTIRPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHDV 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T I+D+ + L R L + D FE + E R FL +A+ Sbjct: 130 MIGR-EPDLTFIIDMDPAVALSR-----GLARGSGEDRFEDMGLAFQETLRHGFLALAKA 183 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 PDRC ++D +VA I Sbjct: 184 NPDRCVLIDGNRDPVAVAAEI 204 >gi|307292799|ref|ZP_07572645.1| thymidylate kinase [Sphingobium chlorophenolicum L-1] gi|306880865|gb|EFN12081.1| thymidylate kinase [Sphingobium chlorophenolicum L-1] Length = 208 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 85/200 (42%), Positives = 109/200 (54%), Gaps = 5/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FIS EG EGAGK+T I L L+++ +V TREPGG+ AEA R +LL+ G D Sbjct: 1 MTQGRFISLEGGEGAGKSTQIRALAAALRQRGLEVVETREPGGSEGAEAIRALLLTGGAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AEA++FAAAR DHVE IRPAL G +L DRFLDSS AYQG D S L +L Sbjct: 61 RWSPRAEALLFAAARADHVERTIRPALDRGAWVLSDRFLDSSRAYQGMGDLSDADIL-AL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I +PD T+ L LP R ++ R+ D +D H+ + F Sbjct: 120 HRIGSGGFLPDRTLFLTLPEAEATARARS----RDGDASDRIGGRDPAFHQAVARAFTRF 175 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 A +P R VD+A +V Sbjct: 176 AEQEPGRFLTVDAAGDSAAV 195 >gi|114770996|ref|ZP_01448436.1| thymidylate kinase [alpha proteobacterium HTCC2255] gi|114548278|gb|EAU51164.1| thymidylate kinase [alpha proteobacterium HTCC2255] Length = 209 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEGI+G+GK+T LL L V TREPGG+ AE R +L+S D + Sbjct: 6 GLFITFEGIDGSGKSTQSQLLYDALNDLGISVIQTREPGGSIGAEIIRSLLVSGDTDRWS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I+PAL + +I++CDRF+DS+ YQG + +D L I Sbjct: 66 AETEILLFTAARRDHLEKTIQPALTKNQIVICDRFVDSTRVYQGVARADLRQTVDELHSI 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ PD T I+D + L R L ++ D FE + +K R F ++++ Sbjct: 126 IIKK-EPDITFIIDTDPEKSLTR-----GLARNSGEDRFEEFGLEFQKKLRNGFSELSKT 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + RCH+++ S + V+ +ILNIV Sbjct: 180 EKSRCHLINGMRSKEEVSNDILNIV 204 >gi|189485350|ref|YP_001956291.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287309|dbj|BAG13830.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 211 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 114/208 (54%), Gaps = 1/208 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI+FEG EG+GKTTH LLK++L+++ Y+V +TREPGGT AEA R +LL+ + Sbjct: 1 MKKNLFITFEGGEGSGKTTHSLLLKKYLEKRGYEVLLTREPGGTILAEAVRRILLNPDSN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E ++ AAR HVE + PAL GK ++CDRF D++ AYQG +DSL Sbjct: 61 -IVPLSELFLYEAARAQHVEEFVFPALNAGKAVICDRFTDATVAYQGYGRKLNLQLIDSL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + P TI LD+ GL R + L D ER+ + HE R+ +L Sbjct: 120 NSTTSFGLTPVLTIYLDILPSEGLSRAKRAKKLNRKIYSDKIERESLQFHESVREGYLSQ 179 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P+R +V + + + I I+ Sbjct: 180 AEKYPERIKVVKTQETVEKTEVCIREII 207 >gi|254489864|ref|ZP_05103059.1| thymidylate kinase [Methylophaga thiooxidans DMS010] gi|224464949|gb|EEF81203.1| thymidylate kinase [Methylophaga thiooxydans DMS010] Length = 206 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 125/210 (59%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FIS EGIEGAGK+T + ++ FL+ + V VTREPGGT E R +LL+ + Sbjct: 2 NGKFISIEGIEGAGKSTQMRFIQSFLEHQGKTVVVTREPGGTVLGEQIRELLLTPRDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR +H+E VI+PAL G +L DRF+D+++AYQG ++S+ + Sbjct: 62 SHDAELLLMFAARAEHLEQVIKPALSRGDWVLSDRFVDATFAYQGGGRGIDIKRIESISD 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++Q + D T++ DLPV +G +RV ++ S D FE++ + EK RQ +L A Sbjct: 122 WTLQAIHTDLTLLFDLPVAVGQERV-----IKRSQDKDRFEQEKGVFFEKIRQCYLQRAD 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++PDR +D+ + +++ + + L+ Sbjct: 177 HEPDRIKKIDAGQTIENIQHQVTTALMALL 206 >gi|126739768|ref|ZP_01755459.1| thymidylate kinase [Roseobacter sp. SK209-2-6] gi|126719000|gb|EBA15711.1| thymidylate kinase [Roseobacter sp. SK209-2-6] Length = 221 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEGI+G+GK+T LL L+ +V +TREPGG+P AE R ++L D++ Sbjct: 11 GLFLTFEGIDGSGKSTQCKLLAEALRFAGKEVVLTREPGGSPGAEEIRRIVLEGDPDKWS 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L ++ Sbjct: 71 AETEILLFTAARRDHLERTILPALKAGKVVICDRFADSTRMYQGLSRGDLRQTVDQLHDL 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +Q PD T+++D+ + GL R + R E FE + + ++ R FL +A+ Sbjct: 131 MIQR-EPDLTLLIDMDPETGLSRAKGRQGREE-----RFEDFGLGLQQQMRAGFLSLAQE 184 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 R ++D VA +L + Sbjct: 185 FNKRFRVIDGTQPIDKVAAKVLAVA 209 >gi|330810988|ref|YP_004355450.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379096|gb|AEA70446.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 210 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L LQ +V +TREPGGTP AE R VLL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLQAAGIEVVLTREPGGTPLAERIREVLLAPIEEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G ++LCDRF DS+YAYQG + +L+ Sbjct: 62 NPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSVERIAALEA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE + R FL A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARASAR------GRLDRFELEGQAFFNAVRNAFLSRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A V ++ ++ L+++ Sbjct: 176 ADPARYLLIDAAQPLTQVQQSLDGLLPRLLER 207 >gi|87199958|ref|YP_497215.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444] gi|87135639|gb|ABD26381.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444] Length = 209 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 115/208 (55%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G F++FEG EG GK+T LL L+ + +V TREPGGT AEA R +LLS + Sbjct: 1 MSRGRFVAFEGGEGVGKSTQGRLLAESLRARGLEVVTTREPGGTAGAEAIRTMLLSTEGE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +GA AEA++FAAAR DHVE +IRP++ G ++CDRF+DSS AYQG + L Sbjct: 61 GWGARAEALLFAAARADHVEKLIRPSVARGAWVVCDRFVDSSRAYQGGGSGLSDADVMQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I ++PD TI+L + +I R+ ++R+ D + H + F Sbjct: 121 HRIGSAGLLPDVTILLTVRPEISAARL----AMRDGNAADRIGGRGEEYHGRVAAAFRRF 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +PDR +VD+ S + V + + Sbjct: 177 AEQEPDRFAVVDAEGSPEEVHARVTAAI 204 >gi|71907819|ref|YP_285406.1| thymidylate kinase [Dechloromonas aromatica RCB] gi|123627287|sp|Q47DZ5|KTHY_DECAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71847440|gb|AAZ46936.1| thymidylate kinase [Dechloromonas aromatica RCB] Length = 204 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 123/207 (59%), Gaps = 10/207 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+GAGK++H+ L L+++ VHVTREPGGT E R +LL+ + Sbjct: 2 KGKFITFEGIDGAGKSSHVEWLAGLLRQRGIVVHVTREPGGTELGEKLRELLLN---EPM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 E E ++ AAR +H+ +I PAL G+ ++CDRF D++YAYQ G R + FL +L+ Sbjct: 59 HLETETLLMFAARREHLARLIEPALARGEWVVCDRFSDATYAYQGGGRGLDRAKFL-ALE 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T++ DLP+D+ +R+ + + LD FE++ V HE+ RQ +L+ A Sbjct: 118 HWVHGHLQPDLTLLFDLPLDVARERI-----VLANRVLDKFEQERVDFHERVRQAYLERA 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P R ++D+ S +++ + IV Sbjct: 173 HTSPSRIRVIDANQSIENIRKQLEQIV 199 >gi|260752471|ref|YP_003225364.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551834|gb|ACV74780.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 216 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G FIS EG EG GK+T I LL L+ K V TREPGG +A RH+LL + Sbjct: 7 VTHGYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDL 66 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA++FAAAR +HV VI+PAL +GK ++CDRF+DSS AYQG+ + Sbjct: 67 HRWTNATEALLFAAARAEHVARVIKPALEKGKWVVCDRFIDSSLAYQGDAGGLTQEDIRC 126 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L I Q ++PD T +L LP G++R Q R+ + FE++ + H+K FL Sbjct: 127 LHRIGSQGILPDRTFLLTLPEGEGIRRAQE----RDKNKGNRFEQRTIDYHKKVNDSFLQ 182 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 +A +P+R ++D++ + + V Sbjct: 183 LAAKEPERFRVIDASGNPEEV 203 >gi|154684547|ref|YP_001419708.1| thymidylate kinase [Bacillus amyloliquefaciens FZB42] gi|166221718|sp|A7Z0F1|KTHY_BACA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|154350398|gb|ABS72477.1| Tmk [Bacillus amyloliquefaciens FZB42] Length = 212 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEMKEILSAEGLPVTATREPGGIDIAEQIREVILNKNNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 A+ EA+++AAAR H+ ++PAL EG+I+LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DAKTEALLYAAARRQHLAEKVQPALKEGRIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ + MPD TI + + GLKR+ + S RE LD + + H K R+ + Sbjct: 119 INQFAIGDTMPDVTIYFSIEPEEGLKRITSNDS-REKNRLDL---EALHFHTKVREGYQK 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P+R H +D++ + V + L ++ E ++K Sbjct: 175 VMQRFPERFHTIDASKKKELVIQDALQVINEALKK 209 >gi|254486634|ref|ZP_05099839.1| thymidylate kinase [Roseobacter sp. GAI101] gi|214043503|gb|EEB84141.1| thymidylate kinase [Roseobacter sp. GAI101] Length = 210 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 6/204 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FISFEGI+G+GK+T +LK L+ YDV +TREPGG+P AE R ++L D Sbjct: 3 SQGFFISFEGIDGSGKSTQTKILKESLEALGYDVILTREPGGSPGAEEIRALVLQGDPDR 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A+ E ++F AAR DH+E I+PAL GK+++CDRF DS+ YQG +D L Sbjct: 63 WSAQTEILLFTAARRDHLERTIQPALDAGKVVICDRFADSTRMYQGLSRGDLRDAVDQLH 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+++D+ GL R +R ++ E FE + R+ FL +A Sbjct: 123 ALMIG-IEPDLTVLIDMDPAEGLSRALSRNTVEER-----FEDFGESLQVAMRKGFLALA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205 DR ++D A VA ++L Sbjct: 177 EEFDDRFVVIDGARQIDQVAADVL 200 >gi|315499862|ref|YP_004088665.1| thymidylate kinase [Asticcacaulis excentricus CB 48] gi|315417874|gb|ADU14514.1| thymidylate kinase [Asticcacaulis excentricus CB 48] Length = 212 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 119/217 (54%), Gaps = 9/217 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG EGAGK+T + L L+ +V TREPGG+ AEA R +L++ + Sbjct: 2 TGRFITFEGGEGAGKSTQVKALVAHLRELALEVVQTREPGGSSGAEALRDLLVTGEAGRW 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ AAR +H+E VIRPAL G ++CDRF DS+ AYQG ++S+ Sbjct: 62 SPMSETLMMYAARANHLEQVIRPALERGAWIVCDRFSDSTRAYQGAGGGVTPELIESIDA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + PD I++D+P + GLKR +L + FE K + HE+ R+ F A Sbjct: 122 AVVADTQPDLVIVMDMPPEAGLKR-----ALARGDAENRFESKGLAFHERLREGFRRRAA 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 P+R ++D+ S + + + VW +V R + L Sbjct: 177 AHPERYRLIDADRSIEDIKAD----VWRVVSGRFAEL 209 >gi|254512028|ref|ZP_05124095.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11] gi|221535739|gb|EEE38727.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11] Length = 203 Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 6/204 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEGI+G+GK+T LL L+R+ ++V +TREPGG+ AE R+++L D + A Sbjct: 1 MFLTFEGIDGSGKSTQARLLAEHLRREGHEVILTREPGGSDGAEEIRNLVLQGDPDRWSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L + Sbjct: 61 ETEILLFTAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRGLVDQLHNLM 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T+++D+ GL R + R E FE + + ++ R FL +A+ Sbjct: 121 IGRE-PDLTLLIDMDPGTGLSRAKGRQGAEER-----FEDFGLDLQQQMRAGFLALAQEF 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 DR +VD + SVA ++ +V Sbjct: 175 SDRFRVVDGNRNMDSVAQDVTKVV 198 >gi|46446707|ref|YP_008072.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia amoebophila UWE25] gi|59798299|sp|Q6MCA2|KTHY_PARUW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46400348|emb|CAF23797.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia amoebophila UWE25] Length = 225 Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EF 62 G FI+ EG EG+GK+T ++ L + + K ++V TREPGGT E+ RH+LL+ Sbjct: 8 GYFITIEGGEGSGKSTLLNQLGDYFRNKGFEVIQTREPGGTKLGESIRHLLLNHEDSISI 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G +AE ++F AAR H+E +I+PAL GKI+LCDRF DS+ AYQG + + Sbjct: 68 GHQAELLLFLAARAQHIEELIQPALKAGKIVLCDRFNDSTIAYQGAARGLNAKKIQEFCQ 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLDIA 181 + E++P+ T+ LD+ +IGL R Q + + LD E + + HE+ RQ FL + Sbjct: 128 LVCAEILPNWTLFLDVSPEIGLARTQKIQKVHAQMGQLDRIESEKIEFHERVRQAFLSLV 187 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +P R + +D+ S V L + E Sbjct: 188 QQEPQRIYRIDANESQSKVLQKALEFLEE 216 >gi|120554780|ref|YP_959131.1| dTMP kinase [Marinobacter aquaeolei VT8] gi|120324629|gb|ABM18944.1| thymidylate kinase [Marinobacter aquaeolei VT8] Length = 214 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 6/217 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T + + L+R D VTREPGGTP AE+ R +LL+ + Sbjct: 3 LARGRFITFEGTEGVGKSTQLDNAAKTLERLGIDYIVTREPGGTPMAESIRELLLAPREE 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ AAR H+ N I PAL GK +LCDRF D+++AYQG + L Sbjct: 63 SVHETTELLLMFAARAQHLHNRILPALSAGKWVLCDRFTDATFAYQGGGRGVSRERIALL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + E+ PD I+LD PV+ G+ R + R LD FER+ ++ R+ +L+ Sbjct: 123 EALVQGEMRPDHVILLDAPVETGMARARKR------GELDRFEREAQAFFQRIRETYLER 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A P R H+V++A + V+ ++ ++ L + VS Sbjct: 177 ATEMPGRYHVVNAALPLEQVSESVSALLTALAKLPVS 213 >gi|213691095|ref|YP_002321681.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254808279|sp|B7GT80|KTHY_BIFLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|213522556|gb|ACJ51303.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457150|dbj|BAJ67771.1| thymidylate kinase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 233 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 85/220 (38%), Positives = 129/220 (58%), Gaps = 15/220 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL GVD Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTVLGKAIRQLLLH-GVDGG 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ G R+ + + Sbjct: 61 AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + ++PD T +LD+ + R+++ ESA D+ R RQ F Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHNRLEHAEDRMESAGSDFQSRT--------RQAF 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 LD+A +P+R H++D++ S + V + I + L++ V+ Sbjct: 172 LDLAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211 >gi|83954240|ref|ZP_00962960.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1] gi|83841277|gb|EAP80447.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1] Length = 212 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEGI+G+GK+T LLK L+ + V +TREPGG+P AE R ++L D + Sbjct: 7 GLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSPGAEEIRALVLQGDPDRWS 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E ++F AAR DH+E I PAL GKI++CDRF DS+ YQG +D L + Sbjct: 67 ARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHSL 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V PD T+++D+ GL R +R ++ E FE + R FL +A Sbjct: 127 MIG-VEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAAE 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 PDR ++ A S +VA +++ V Sbjct: 181 FPDRFVTINGAQSIDAVAADVIAQV 205 >gi|94496389|ref|ZP_01302966.1| Thymidylate kinase [Sphingomonas sp. SKA58] gi|94424135|gb|EAT09159.1| Thymidylate kinase [Sphingomonas sp. SKA58] Length = 208 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 120/212 (56%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FIS EG EGAGK+T + L R L+ + DV TREPGG+ AEA R +LL+ G D Sbjct: 1 MTTGRFISLEGGEGAGKSTQLRALARTLRERGLDVLETREPGGSDGAEAIRTLLLTGGAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AEA++FAAAR DH+E IRPAL G +L DRFLDSS AYQG+ + S + +L Sbjct: 61 RWSPRAEALLFAAARADHIEKTIRPALARGAWVLSDRFLDSSRAYQGQGELSDSDIV-AL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + +PD T++L LP +R R+ +D +D H F Sbjct: 120 HRIGSADFLPDRTLVLTLPD----AVAADRARARDGDHVDRIGGRDSRFHHAVADAFARF 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A + +R +D++ + ++V +++ + +L+ Sbjct: 176 AAQESERVRAIDASGTTEAVTQRLVDALADLL 207 >gi|118594886|ref|ZP_01552233.1| thymidylate kinase [Methylophilales bacterium HTCC2181] gi|118440664|gb|EAV47291.1| thymidylate kinase [Methylophilales bacterium HTCC2181] Length = 204 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 124/204 (60%), Gaps = 9/204 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN LFIS EG++GAGKTTHI ++ + + K ++TREPGGT E R +LL + Sbjct: 1 MNKPLFISLEGVDGAGKTTHIHFIEDYFRTKGLPFYMTREPGGTDLGEKLRLLLLH---E 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A E ++ AAR +H++ +I+P L +G ++ DRF D++YAYQ +D L Sbjct: 58 EMDALTETMLMFAARCEHIQTIIKPKLDQGITVVSDRFTDATYAYQAGGKGVDARSIDVL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +++ PD T + D+PV+I ++R L+++ +D FER++ + H+ R +LD+ Sbjct: 118 KSLVQKDLDPDLTFLFDVPVEISIER------LKDTRTMDKFEREEPIFHQSIRNAYLDL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A++ P R H+++ H+ +++ I Sbjct: 172 AQSFPQRFHVLNGTHAIEAIQDEI 195 >gi|328950279|ref|YP_004367614.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884] gi|328450603|gb|AEB11504.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884] Length = 202 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 118/204 (57%), Gaps = 12/204 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG+GK+T + L +L+++ V VTREPGGTP A R LLS +D Sbjct: 1 MKPGFFITFEGPEGSGKSTQAAHLAAWLRQQGVSVVVTREPGGTPLGRAVRQWLLSESMD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +++ A R +HV +VIRPAL G++++ DRF+DSSYAYQG +L ++ Sbjct: 61 PV---TEFLLYTADRAEHVRHVIRPALAAGQVVISDRFVDSSYAYQGFGRGLDLEWLRAV 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ ++PD T +LDLP ++GL R R D E++ + H + R+ + + Sbjct: 118 SQPVLEGLVPDVTFLLDLPPEVGLARKAER---------DRLEQESLAFHRRVREGYRVL 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 AR +P R ++D+ + + + Sbjct: 169 ARAEPQRFVVLDATQPPEVIVEQV 192 >gi|283783708|ref|YP_003374462.1| dTMP kinase [Gardnerella vaginalis 409-05] gi|283441867|gb|ADB14333.1| dTMP kinase [Gardnerella vaginalis 409-05] Length = 234 Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 83/220 (37%), Positives = 121/220 (55%), Gaps = 20/220 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFISFEGI+G GKTT + LK +LQ +V VTREPGGT + R +LL Sbjct: 28 NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118 A EA++FAA R HV VIRPAL G +++ DR++DSS AYQ + L +D Sbjct: 86 VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQA---GGRELTMDDVR 142 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L E + + P+ T +LD+ + KR+ ESA +D+ R R+ FL Sbjct: 143 TLSEWATDSLWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRT--------REAFL 194 Query: 179 DIARNQPDRCHIVDSAHS----FQSVATNILNIVWELVQK 214 D+A+ DR ++D+ S F+ + ++ N++ E+ K Sbjct: 195 DLAQESADRYRVLDATFSAKSLFELIVQDVHNLIKEIETK 234 >gi|148553408|ref|YP_001260990.1| thymidylate kinase [Sphingomonas wittichii RW1] gi|166987709|sp|A5V3I6|KTHY_SPHWW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148498598|gb|ABQ66852.1| thymidylate kinase [Sphingomonas wittichii RW1] Length = 208 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 82/210 (39%), Positives = 117/210 (55%), Gaps = 6/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GK+T L L+ + DV TREPGG+ AEA R +LL D + Sbjct: 3 GRFITLEGGEGVGKSTQAKALAAALRARGLDVVETREPGGSDGAEAIRRLLLEGAADRWN 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AEA++FAAAR DHV IRPA+ G+ ++CDRFLDSS AYQG D + +L I Sbjct: 63 ARAEALLFAAARADHVARTIRPAIEAGRWVVCDRFLDSSIAYQGGADGLGDEAIRTLHAI 122 Query: 124 SVQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +PD T++LD+PV D ++ + A D FE++D H++ F IA Sbjct: 123 GSAGYLPDRTLLLDMPVFDAAFRQAEAGI-----ANSDRFEKRDEAFHDRVADSFRRIAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R +++ S Q V ++ + +L+ Sbjct: 178 QEPARIRTINAQGSPQEVTARLIEALADLL 207 >gi|323136277|ref|ZP_08071359.1| thymidylate kinase [Methylocystis sp. ATCC 49242] gi|322398351|gb|EFY00871.1| thymidylate kinase [Methylocystis sp. ATCC 49242] Length = 226 Score = 141 bits (356), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/205 (45%), Positives = 125/205 (60%), Gaps = 2/205 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T ++ L L+ + +V TREPGGTP AE R VLLS + G Sbjct: 10 GRFITFEGGEGAGKSTQLARLSEHLRGRGIEVVATREPGGTPKAEKLREVLLSGRIAPLG 69 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA +FAAAR+DHVE++I PAL G +L DRF DS+ AYQG R + L+ Sbjct: 70 PLAEAALFAAARIDHVESLIAPALARGAWVLSDRFADSTRAYQGARGGVDDASISLLERA 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ V PD TIILDLP GL R +R + D FE ++ + HE+ R+ FLDIA Sbjct: 130 AIGNVRPDLTIILDLPPQEGLARAASRRAA--GVAPDRFEAEEELFHEELRRAFLDIAEQ 187 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+RC +V+ A + VA I +V Sbjct: 188 EPERCCVVNGALAADEVAQAIRQLV 212 >gi|160893397|ref|ZP_02074183.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50] gi|156864972|gb|EDO58403.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50] Length = 211 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 126/211 (59%), Gaps = 14/211 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EG +GAGKTT I LLK +L +K YDV +TR+PGG +EA R V+L+ E G Sbjct: 6 GIFITMEGPDGAGKTTQIELLKDYLNKKGYDVLITRDPGGNAVSEAIREVILNKDFTEMG 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120 E +++AAAR V+ I+PAL GK ++ DRF+DSS YQG + L +D+ + Sbjct: 66 YMTELLLYAAARAQLVKENIKPALSAGKAVIADRFVDSSAVYQG---IGRGLGIDTVYKV 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++Q ++PD T ++DL + G+ R +N+ A LD E++ + H+K + + + Sbjct: 123 NEFALQGILPDMTFLMDLDAEAGIARKKNQ------AELDRMEQESLEFHKKVVEGYRCL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV--W 209 A PDR VD+A +++ I++ V W Sbjct: 177 AEMNPDRIVKVDAALPKEAIHDIIISYVEKW 207 >gi|158521178|ref|YP_001529048.1| dTMP kinase [Desulfococcus oleovorans Hxd3] gi|229500940|sp|A8ZXL3|KTHY_DESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|158510004|gb|ABW66971.1| dTMP kinase [Desulfococcus oleovorans Hxd3] Length = 214 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 110/202 (54%), Gaps = 1/202 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEGAGKTT + L FL++ + VTREPGGT + R +LL + Sbjct: 1 MFITLEGIEGAGKTTQLPRLVDFLEQHGHTCVVTREPGGTGMGQKIRSLLLDPDNSDMSP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++AA R HV +I PAL EGK ++CDRF D++ YQG + L ++ Sbjct: 61 ETELFLYAADRAQHVRRLIEPALAEGKTVVCDRFADATEVYQGWARGLDMELVQVLNRVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 PD T++ DLP + GLKR R + D FE + + HE+ R +LD+AR Sbjct: 121 TGGRKPDITLLFDLPPEAGLKRAWQRIARNGKEAADCRFENEKMAFHERVRHGYLDLARR 180 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 +P+R ++D+ VA ++ Sbjct: 181 EPERFVVIDALGPAAEVAGRMI 202 >gi|89053768|ref|YP_509219.1| thymidylate kinase [Jannaschia sp. CCS1] gi|122499181|sp|Q28SW8|KTHY_JANSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|88863317|gb|ABD54194.1| thymidylate kinase [Jannaschia sp. CCS1] Length = 208 Score = 141 bits (356), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 80/204 (39%), Positives = 115/204 (56%), Gaps = 6/204 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFIS EGI+G+GK+T + L +L+ + D TREPGG+ AE R +L+ D + A Sbjct: 4 LFISLEGIDGSGKSTQTARLVDWLRVRGRDPLQTREPGGSEGAEEIRRLLVEGDPDRWSA 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++F AAR DH+E IRPAL G+ ++ DRF DS+ YQG + +D + + Sbjct: 64 ETEILLFTAARRDHLERTIRPALASGRDVVTDRFADSTRVYQGATRGALRGLVDRIHAEA 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + E PD T+ILD+ ++ L R L + D FE + +K R F +AR Sbjct: 124 I-EAEPDLTLILDMDPELALSR-----GLARDSGEDRFEDFGLPFQQKLRAGFQALAREY 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 PDRCHIVD++ ++A I IV Sbjct: 178 PDRCHIVDASADPDAIAHTIQTIV 201 >gi|169830255|ref|YP_001716237.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C] gi|226732654|sp|B1I165|KTHY_DESAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169637099|gb|ACA58605.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C] Length = 221 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 8/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG+FI FEGI+GAGKTT ++ L + L +N+ V VTREPGGT EA R VLL G E Sbjct: 2 SGVFIVFEGIDGAGKTTQLAYLHEALLSMRNHRVLVTREPGGTRIGEAVRRVLLDTGNSE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA+++AAAR V+RPAL G+I+L DRFLDSS AYQG + L + Sbjct: 62 MTGETEALLYAAARSQFTAEVVRPALARGEIVLSDRFLDSSLAYQGFGRGLELHRLRQVN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD T++LDLPV + R+ D ER+ V E+ R+ +L++A Sbjct: 122 FLATGGLRPDLTVLLDLPVAAAVARMDPDRR-------DRLEREGVDFFERVRRGYLELA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P IV++ A+ I V L+Q R Sbjct: 175 SADPGHYLIVNAEREAGVCASAIWARVRALLQDR 208 >gi|303248931|ref|ZP_07335178.1| thymidylate kinase [Desulfovibrio fructosovorans JJ] gi|302489654|gb|EFL49590.1| thymidylate kinase [Desulfovibrio fructosovorans JJ] Length = 211 Score = 141 bits (355), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 113/215 (52%), Gaps = 7/215 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T I+LLK L+ V TR+PGG P E R +LLS Sbjct: 1 MFITFEGIEGSGKSTQITLLKSALEATGKSVVTTRQPGGCPLGETLRSILLSTQTKNLDH 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A R H+ VIRPA G I+LCDRF DS+ YQG L L +I+ Sbjct: 61 RAELFLYLADRAQHIAEVIRPAQNAGHIVLCDRFADSTVVYQGYGRGLDVAMLHELNDIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFLDIAR 182 V P TI+LDL + GL+R R +L+ C FE +D+ H + R +L +A Sbjct: 121 VAGAWPQRTILLDLDPEQGLRRALAR-NLKTGNCATEGRFEAEDIDFHTRIRDGYLALAS 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P R ++D+ +VA VW V R+S Sbjct: 180 LHPRRYAVIDATPDVATVA----KAVWAAVSSRMS 210 >gi|152996289|ref|YP_001341124.1| dTMP kinase [Marinomonas sp. MWYL1] gi|189028836|sp|A6VXL0|KTHY_MARMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150837213|gb|ABR71189.1| dTMP kinase [Marinomonas sp. MWYL1] Length = 212 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 12/212 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FIS EG EG+GKTT I ++++L +TREPGGTP AE R ++L+ + Sbjct: 3 GKFISLEGGEGSGKTTAIHFIRQWLDDHKIPYIMTREPGGTPLAEEIRQLVLTPRDESVN 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR H+ I+PAL +G ++ DRFLDSSY YQG+ LD L Sbjct: 63 DVTELLLVFAARAQHLAEKIQPALEKGTWVISDRFLDSSYVYQGKARGGDIAMLDQLANW 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V + PD T++LD+PV++G +RV R D +++ H+K R FL+ A Sbjct: 123 VVGDNKPDATLVLDVPVELGQERVVQRQH------QDRLDKESFAFHQKVRDGFLERAEA 176 Query: 184 QPDRCHIVDSAHSFQSVATNI------LNIVW 209 P R IVD++ S +SV + I LN W Sbjct: 177 DPKRVKIVDASQSLESVKSQIEEQLAKLNEAW 208 >gi|254439317|ref|ZP_05052811.1| thymidylate kinase [Octadecabacter antarcticus 307] gi|198254763|gb|EDY79077.1| thymidylate kinase [Octadecabacter antarcticus 307] Length = 223 Score = 141 bits (355), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 83/202 (41%), Positives = 112/202 (55%), Gaps = 12/202 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFISFEGI+G+GK+T LLK RF D +TREPGG+ AE R +LL+ D + Sbjct: 22 GLFISFEGIDGSGKSTQTKLLKDRF-----PDAVLTREPGGSAGAEEIRALLLTGDPDRW 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL GK ++CDRF DS+ YQG + +D+L + Sbjct: 77 SAETEILLFTAARRDHLEKTILPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHD 136 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T I+D+ I L R L + D FE + E R FL +A+ Sbjct: 137 VMIGR-EPDLTFIIDMDPGIALSR-----GLARGSGEDRFEDMGLAFQETLRHGFLALAK 190 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 PDRC ++D +VA I Sbjct: 191 ANPDRCVLIDGNRDPVAVAAEI 212 >gi|78485063|ref|YP_390988.1| thymidylate kinase [Thiomicrospira crunogena XCL-2] gi|78363349|gb|ABB41314.1| thymidylate kinase [Thiomicrospira crunogena XCL-2] Length = 219 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 79/201 (39%), Positives = 114/201 (56%), Gaps = 7/201 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG F++ EG EG GK+T++ ++++L N DV VTREPGGT +EA R +LL E Sbjct: 11 SGKFLTLEGTEGGGKSTNLVFIQQWLADHNIDVVVTREPGGTAVSEAVREILLDKQYSEM 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR H++ I PAL GK ++ DRF D+SYAYQG ++ + D + E Sbjct: 71 TPETELLLMFAARNQHLQEKILPALAAGKWVVSDRFTDASYAYQG---GARGIAYDRIAE 127 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I Q PD T + DLP++ G+KRV R L A +D FE++ + EK R +L Sbjct: 128 IENWVQQGCYPDMTFVFDLPIEEGMKRVAARSKLSGQA-IDRFEQEKMEFFEKVRAAYLY 186 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 A P R ++++A V Sbjct: 187 RAEQAPQRYCVLNAARPLNEV 207 >gi|331000633|ref|ZP_08324288.1| dTMP kinase [Parasutterella excrementihominis YIT 11859] gi|329570905|gb|EGG52613.1| dTMP kinase [Parasutterella excrementihominis YIT 11859] Length = 202 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 119/205 (58%), Gaps = 11/205 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+T ++ L+ + D +TREPGG +AE R +LL+ + Sbjct: 5 GKFITVEGVDGAGKSTQFEVIANALKERGIDFVMTREPGGPQSAEKIRELLLN---EPMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+ E +V AAR +++ +IRPAL GK +LCDRF D+S AYQG ++ L Sbjct: 62 AKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLANF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T+I DLP ++ R+ + LD FE++D H + RQ +L+IA+ Sbjct: 122 VHPDIKPDKTVIFDLPTEVAAARLSRK--------LDRFEQEDADFHRRVRQGYLEIAKR 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+RC ++D+ + + V+ +L V Sbjct: 174 EPERCVVIDAQGTPEEVSARVLKEV 198 >gi|118586633|ref|ZP_01544073.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163] gi|118432948|gb|EAV39674.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163] Length = 213 Score = 140 bits (354), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 126/214 (58%), Gaps = 11/214 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 M G FI+ EG +GAGKT+ + L L+ D + TREPGG +EA R ++L Sbjct: 1 MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA++FAAAR H+ I PAL +GKI+L DRF+DSS AYQG + L +++ Sbjct: 61 PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQG---GGRELGIEA 117 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + EI + + P+ T++LDLP ++G+ R+ S ++ ++ ++ H+K RQ Sbjct: 118 VSEINNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQT 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +L +A++QP+R ++D+ S + +A N L ++ E Sbjct: 174 YLQLAKDQPNRIKVLDATQSPEKIAINALQLIQE 207 >gi|94499607|ref|ZP_01306144.1| thymidylate kinase [Oceanobacter sp. RED65] gi|94428361|gb|EAT13334.1| thymidylate kinase [Oceanobacter sp. RED65] Length = 206 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 121/211 (57%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+ EG+EG GKTT+I +K +LQ + D VTREPGGT E+ R++LL D Sbjct: 1 MQAGLFITVEGVEGVGKTTNIEYIKNWLQHQGIDYVVTREPGGTDLGESLRNLLLHG--D 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +AE ++ AAR H+E VI+PAL G+ +LCDRF DS++AYQG ++ L Sbjct: 59 DVSDKAELLMMFAARSQHIEKVIKPALAAGRWVLCDRFTDSTFAYQGGGRQLNPEWIRQL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +E+ PD T +LD PV+IG + D E +D++ + R FL Sbjct: 119 ETLVQEELQPDVTFLLDCPVEIGRA------RAAARSASDRIESQDLVFFNRVRDAFLHR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A + DR ++D++ V I +++ EL Sbjct: 173 A-SLYDRFRVIDASQDLLQVQQQIESVLVEL 202 >gi|308171919|ref|YP_003918624.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7] gi|307604783|emb|CBI41154.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7] gi|328551729|gb|AEB22221.1| thymidylate kinase [Bacillus amyloliquefaciens TA208] gi|328909989|gb|AEB61585.1| thymidylate kinase [Bacillus amyloliquefaciens LL3] Length = 212 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 127/215 (59%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKDILSAEGHPVTATREPGGIDIAEQIREVILNKNNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 A+ EA+++AAAR H+ ++PAL EG+I+LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DAKTEALLYAAARRQHLVEKVQPALKEGRIVLCDRFIDSSLAYQG---YARGLGIDEVFS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + ++ + MPD TI + + GLKR+ + S RE LD + + H K R+ + Sbjct: 119 INRFAIGDTMPDVTIYFSIDPEEGLKRITSNDS-REKNRLDL---EALHFHTKVREGYQK 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P+R H +D++ + V + L ++ E ++K Sbjct: 175 VMQRFPERFHTIDASRKKEFVIQDALQVINEALKK 209 >gi|110680630|ref|YP_683637.1| thymidylate kinase [Roseobacter denitrificans OCh 114] gi|109456746|gb|ABG32951.1| thymidylate kinase [Roseobacter denitrificans OCh 114] Length = 212 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G FI+FEGI+G+GK+T L L+ ++V TREPGG+P AE R ++L D Sbjct: 7 DTGFFITFEGIDGSGKSTQSKRLAAHLRASGHEVVETREPGGSPGAEEIRALVLQGDPDR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+ YQG +D+L Sbjct: 67 WSAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLH 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E+ + PD T+++D+ IGL R +R + E FE + + R FL +A Sbjct: 127 ELMIGR-EPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQTRMRAGFLALA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + R +VD SVA ++ IV Sbjct: 181 QEFKARFRLVDGGRDADSVAAEVIKIV 207 >gi|77165137|ref|YP_343662.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707] gi|76883451|gb|ABA58132.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707] Length = 206 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EGIEGAGK+T + +++ LQ +V VTREPGGT E R +LLS ++ A+ E Sbjct: 2 LEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLEGMSADTEL 61 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 ++ AAR++HV+ VI PAL GK +LCDRF +SYAYQG + L+ ++ + Sbjct: 62 LLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKLESWALNCL 121 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD ++ D+PV +GL+R R LD FE++ + ++ R I+L +A+ PD+ Sbjct: 122 RPDLILLFDVPVRLGLQRATTR-----CQQLDRFEQEKIDFFDRARTIYLSLAKKYPDQY 176 Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214 ++DS+ V I ++ +++ Sbjct: 177 RLIDSSLPLTRVQEAIQKVIMAFLEE 202 >gi|46580545|ref|YP_011353.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough] gi|59798319|sp|Q72A57|KTHY_DESVH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46449964|gb|AAS96613.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough] gi|311234283|gb|ADP87137.1| thymidylate kinase [Desulfovibrio vulgaris RCH1] Length = 224 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 3/206 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T + L +LQ++ + V VTREPGG+ R +LL G + Sbjct: 1 MFITFEGIEGSGKSTALQGLAAWLQQRGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV V+RPAL EG ++L DR+ DS+ YQG + L +++ Sbjct: 61 EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHEKRRQIFLDIAR 182 V + PD TI+LDL + GL R R ++RE A FE + + H + R+ +L A Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALAR-NIREGMHAAEGRFEAESLAFHTRVREGYLTWAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 R +VD+ S + V +++ IV Sbjct: 180 LHGGRYRVVDATQSPEDVVRDVVGIV 205 >gi|145589149|ref|YP_001155746.1| dTMP kinase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047555|gb|ABP34182.1| thymidylate kinase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 214 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 87/221 (39%), Positives = 126/221 (57%), Gaps = 24/221 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCG 58 + G FISFEGI+GAGK+THI K+ +Q + D V +TREPGGTP E R++LL Sbjct: 6 LYPGFFISFEGIDGAGKSTHIESFKKLMQERYPDREVVMTREPGGTPLGEQLRNLLLDAP 65 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E EA++ AAR +H+ +I PAL+ GKI++ DRF D+S+AYQG + L L Sbjct: 66 MN---LETEALLMFAARREHIAQIIEPALLAGKIVISDRFTDASFAYQG---GGRGLSLA 119 Query: 119 SLQEIS--VQE------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L ++ VQ + P+ TI+ DLP +I R R +R D FE+ D++ Sbjct: 120 KLNDLEQWVQGRADGKLLQPNLTILFDLPGEIAQAR---RSKVRTP---DKFEKLDLVFF 173 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI--LNIVW 209 EK RQ +L A P R H VD+ + +++ + L I W Sbjct: 174 EKVRQEYLRRALEDPSRFHKVDATQTPEAIWNGLQALEINW 214 >gi|298252464|ref|ZP_06976259.1| thymidylate kinase [Gardnerella vaginalis 5-1] gi|297533354|gb|EFH72237.1| thymidylate kinase [Gardnerella vaginalis 5-1] Length = 234 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 123/218 (56%), Gaps = 16/218 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFISFEGI+G GKTT + LK +LQ +V VTREPGGT + R +LL Sbjct: 28 NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 A EA++FAA R HV VIRPAL G +++ DR++DSS AYQ G R+ ++ + +L Sbjct: 86 VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQAGGRELTKD-DVRTL 144 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + P+ T +LD+ + KR+ ESA +D+ R R+ FLD+ Sbjct: 145 SEWATDSLWPNRTYLLDMQPEDAFKRLHREQDRMESAGIDFARRT--------REAFLDL 196 Query: 181 ARNQPDRCHIVDSAHS----FQSVATNILNIVWELVQK 214 A+ DR ++D+ S F+ + ++ N++ E+ K Sbjct: 197 AQESADRYRVLDATFSAKSLFELIVQDVHNLIKEIETK 234 >gi|291455870|ref|ZP_06595260.1| dTMP kinase [Bifidobacterium breve DSM 20213] gi|291382279|gb|EFE89797.1| dTMP kinase [Bifidobacterium breve DSM 20213] Length = 206 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 15/215 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL GV+E Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAVRQLLLH-GVNEG 60 Query: 63 GAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117 A+ AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ G R+ + + Sbjct: 61 AADIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTSE-EI 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + ++PD T +LD+ + R+++ ESA D+ R RQ F Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPTLSHNRLEHAEDRMESAGDDFQSRT--------RQAF 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD+A +P+R ++D++ S + V I + EL Sbjct: 172 LDLAAVEPNRFRVIDASQSIEQVWAAIEADIKELA 206 >gi|300114110|ref|YP_003760685.1| thymidylate kinase [Nitrosococcus watsonii C-113] gi|299540047|gb|ADJ28364.1| thymidylate kinase [Nitrosococcus watsonii C-113] Length = 210 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 117/203 (57%), Gaps = 5/203 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EGIEGAGK+T ++ +++ LQ +V VTREPGGT E R +LLS ++ A+ Sbjct: 3 FIALEGIEGAGKSTQLTFIQQLLQSAGKNVVVTREPGGTLLGEQIRELLLSPRLESMSAD 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR++HV+ VI PAL GK +LCDRF +SYAYQG + +L+ ++ Sbjct: 63 TELLLMFAARVEHVQQVILPALAAGKWILCDRFTSASYAYQGGGRKLPLSRIATLESWAL 122 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD ++ D+P +GL+R R LD FE++ + ++ R +L +A+ P Sbjct: 123 NGLRPDLILLFDVPARLGLQRAATR-----CQQLDRFEQEKIDFFDRVRMTYLSLAKRYP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 + ++DS+ V I ++ Sbjct: 178 AQYCLIDSSLPLLKVQEAIQKVM 200 >gi|116491390|ref|YP_810934.1| thymidylate kinase [Oenococcus oeni PSU-1] gi|290890956|ref|ZP_06554020.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429] gi|122276428|sp|Q04E53|KTHY_OENOB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116092115|gb|ABJ57269.1| thymidylate kinase [Oenococcus oeni PSU-1] gi|290479355|gb|EFD88015.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429] Length = 213 Score = 140 bits (353), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 126/214 (58%), Gaps = 11/214 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 M G FI+ EG +GAGKT+ + L L+ D + TREPGG +EA R ++L Sbjct: 1 MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA++FAAAR H+ I PAL +GKI+L DRF+DSS AYQG + L +++ Sbjct: 61 PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQG---GGRELGIEA 117 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + EI + + P+ T++LDLP ++G+ R+ S ++ ++ ++ H+K RQ Sbjct: 118 VGEINNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQT 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +L +A++QP+R ++D+ S + +A N L ++ E Sbjct: 174 YLQLAKDQPNRIKVLDATQSPEKIAINALQLIQE 207 >gi|258405528|ref|YP_003198270.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692] gi|257797755|gb|ACV68692.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692] Length = 215 Score = 140 bits (352), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 117/205 (57%), Gaps = 1/205 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T +LL ++L+ ++V TREPGG+ + R +LLS + Sbjct: 1 MFITFEGIEGCGKSTQSTLLAQWLKNHGWEVQTTREPGGSRLGQNLRSILLSMESRDLTG 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E+E ++ A R HV I+PAL +G ++L DRF DS+ YQG L +L +++ Sbjct: 61 ESELFLYLADRAQHVHQTIKPALDKGAVVLSDRFADSTVVYQGYGRGLDPNLLHTLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 VQ V PD T++ DLPV++GLKR R + ++ FE + + H + R+ +L A Sbjct: 121 VQGVWPDLTLLFDLPVELGLKRAMARNFQDNKTEQEGRFEAESLAFHSRVREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +R +VD+ +++ + I+ Sbjct: 181 NKNRFQVVDAEPDPETIFNEVQRIL 205 >gi|23336149|ref|ZP_00121376.1| COG0125: Thymidylate kinase [Bifidobacterium longum DJO10A] gi|189440137|ref|YP_001955218.1| thymidylate kinase [Bifidobacterium longum DJO10A] gi|238692075|sp|B3DUA1|KTHY_BIFLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189428572|gb|ACD98720.1| Thymidylate kinase [Bifidobacterium longum DJO10A] Length = 206 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 15/215 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL GVD Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ G R+ + + Sbjct: 61 AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + ++PD T +LD+ + R+++ ESA D+ R RQ F Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHNRLEHAEDRMESAGSDFQSRT--------RQAF 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD+A +P+R ++D++ S ++V I + + EL Sbjct: 172 LDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206 >gi|82702516|ref|YP_412082.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196] gi|123544544|sp|Q2Y981|KTHY_NITMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|82410581|gb|ABB74690.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196] Length = 205 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 13/204 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EGI+GAGKTTH+ L+ FL+ + +V VTREPGGTP EA R +LL Sbjct: 3 GKFITLEGIDGAGKTTHLRWLEYFLKERGKNVMVTREPGGTPLGEALRDILLDS-RQTMH 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE EA++ AAR +H++ VI PAL G+ ++ DRF D+S+AYQG + L L L E+ Sbjct: 62 AETEALLMFAARREHLDKVILPALSRGEWVISDRFTDASFAYQG---GGRGLSLQKLNEL 118 Query: 124 S--VQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 VQ E PD T+ LD+ + G +R N +R++ D FE++ + R+ +L+ Sbjct: 119 ECWVQGEFQPDVTLYLDVSIASGRQRTSN---IRQA---DRFEKEQDEFFRRVREAYLER 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A+ P+R ++D+ S + V ++ Sbjct: 173 AKEFPERIRVIDANQSLEDVRRSV 196 >gi|27262450|gb|AAN87506.1| Thymidylate kinase [Heliobacillus mobilis] Length = 241 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/216 (37%), Positives = 117/216 (54%), Gaps = 13/216 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +GAGKTT +LL + + Y V TREPGGTP EAAR VLL + Sbjct: 31 GLFITLEGADGAGKTTQGALLAQAFRALQYPVLETREPGGTPVGEAARRVLLDPSLTGMA 90 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++AAAR + VI PAL G +++CDRF DS+ AYQG + L +D LQ I Sbjct: 91 PMAEVFLYAAARAQLIREVILPALAAGTVVICDRFTDSTLAYQG---YGRGLDMDRLQSI 147 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T++LD+ D GL R + + + D E + H+K R FL++ Sbjct: 148 NHWATEGLAPDLTLLLDIDSDEGLSRARRKGA-------DRMEMETAAFHQKVRHGFLEL 200 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A + R ++ + V ++N V E V + V Sbjct: 201 AAKETSRIRVIPAGRDIFEVHRQVINAVREKVPELV 236 >gi|295402004|ref|ZP_06811966.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93] gi|294976006|gb|EFG51622.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93] Length = 210 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F SFEG EGAGKTT I++L+ FL+ K +DV TREPGG AE R ++L+ E Sbjct: 3 GRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEMD 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AAAR H+ I PA+ GKI+LCDRF+DSS AYQG ++ L +D + +I Sbjct: 63 GRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQG---FARELGMDEILQI 119 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ P TI D+ IGL+R+Q RE LD +++ H K R+ +L + Sbjct: 120 NQFAIDGYFPTLTIYFDIDPKIGLERIQKNKQ-REMNRLDM---ENLSFHYKVREGYLKL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A+ DR +D++ S V + + + + +R Sbjct: 176 AKRFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210 >gi|330994629|ref|ZP_08318552.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1] gi|329758270|gb|EGG74791.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1] Length = 213 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 7/214 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG EGAGK+T LL L+ +DV +TREPGGT AAEA R LL G D Sbjct: 3 GLFITFEGGEGAGKSTQARLLADHLRAHGHDVDLTREPGGTEAAEALRDFLLFGGHD-LS 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQE 122 A AE + AAR DHV+ I PAL +G+I++CDRF DS+ AYQG S + LD + + Sbjct: 62 ARAEVLTHFAARADHVDRRILPALAQGRIVVCDRFADSTEAYQGYGVSHADTGLLDMIGQ 121 Query: 123 I-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ V PD T +L +P D+ R++ R R D +E +D H + F IA Sbjct: 122 LRAMLPVQPDLTFVLQVPPDVARDRLRQRADGRA----DRYEAEDAAFHARVAAGFDAIA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R RCH +D++ V I ++ + R Sbjct: 178 RRDAARCHRIDASGDAGGVQQAIRAVLAPRLAGR 211 >gi|308271741|emb|CBX28349.1| Thymidylate kinase [uncultured Desulfobacterium sp.] Length = 216 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GKTT I FL++K D +TREPGGT + R +LL + Sbjct: 11 MFITFEGIEGSGKTTQIRHAMEFLKQKGKDCLMTREPGGTITGQKIRSILLDPESNGMDP 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +++ A R +HV +I PAL GK +LCDR+ D++ AYQG LD L ++ Sbjct: 71 STELLLYFADRAEHVNKIINPALSAGKTVLCDRYYDATKAYQGFARGLNMDLLDRLHKLI 130 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDIARN 183 + ++ PD TI+LDL GL R + + + A ++ FE++ + H+K R +L++AR Sbjct: 131 IHDLKPDITILLDLDPKTGLSRAWKQINEGQRAGVETRFEKETLDFHDKVRNGYLELARI 190 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 + R I+D+++ V +I+ Sbjct: 191 EAKRFKIIDASNDENQVKKDII 212 >gi|149201816|ref|ZP_01878790.1| thymidylate kinase [Roseovarius sp. TM1035] gi|149144864|gb|EDM32893.1| thymidylate kinase [Roseovarius sp. TM1035] Length = 208 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF+SFEGI+G+GK+T L L+ K DV +TREPGG+P AE R ++L D Sbjct: 3 GQGLFLSFEGIDGSGKSTQARRLAETLRAKGRDVVLTREPGGSPGAEEIRRLVLEGDKDR 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E VI PAL G +++CDRF DS+ YQG + +D L Sbjct: 63 WSAETEILLFTAARRDHLERVIAPALARGAVVICDRFADSTRMYQGLGRADLRGIVDQLH 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+++D+ +GL R +R + A + F + + R FL ++ Sbjct: 123 ALMIGR-EPDLTVLIDIDPGVGLGRALSRGG--DEARFESFGEG---MQARMRTGFLALS 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + P R ++D A +VA ++ +V Sbjct: 177 QEFPARFTVIDGARDMDAVAEDVARVV 203 >gi|159043474|ref|YP_001532268.1| dTMP kinase [Dinoroseobacter shibae DFL 12] gi|254808289|sp|A8LRW0|KTHY_DINSH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157911234|gb|ABV92667.1| dTMP kinase [Dinoroseobacter shibae DFL 12] Length = 207 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 6/204 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G ISFEGI+G+GK+T L L+ D +TREPGG+P AE R +L+ D Sbjct: 3 QPGRLISFEGIDGSGKSTQARRLAEHLRDTGRDPLLTREPGGSPGAEDIRRLLVEGDPDR 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E E ++F AAR DH+E +I+PAL EG+ ++ DRF DS+ YQG +D L Sbjct: 63 WSPETELLLFTAARRDHLERLIQPALAEGRDVITDRFADSTRVYQGATRGDLRALVDQLH 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T ++D+P ++ L R L ++ D FE + R FLD+A Sbjct: 123 SLMIGR-EPDLTFVIDMPPELALTR-----GLARASGEDRFEEFGLPFQTALRAGFLDLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205 R PDRC ++D VA +++ Sbjct: 177 RANPDRCVVIDGNRPEAEVAADVI 200 >gi|294083926|ref|YP_003550683.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663498|gb|ADE38599.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322] Length = 214 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 121/215 (56%), Gaps = 7/215 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 SG+ I+FEG EG+GKTT I L ++L+ + N ++ VTREPGGT AE R +L+ D Sbjct: 2 SGILITFEGGEGSGKTTQIQSLVKWLESEFSNTELVVTREPGGTEGAELIRDLLVRGASD 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ +A+R +H++NVI PAL + KI++ DRF DS+ YQG + +L Sbjct: 62 RWQPITEALLMSASRHEHIKNVIEPALAQNKIVISDRFFDSTTIYQGIVGGVDAQAVATL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ V+PD T ++D+ +GL R NR FE K + H+K R FL + Sbjct: 122 TKLACGNVIPDLTFLMDMDAKVGLARAGNRDDDET-----RFEEKGLSFHQKVRDAFLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A +R IVD+ + +A I N V LV + Sbjct: 177 AHMNENRFVIVDATKTTSEIADIIRNKVATLVAMK 211 >gi|254283811|ref|ZP_04958779.1| thymidylate kinase [gamma proteobacterium NOR51-B] gi|219680014|gb|EED36363.1| thymidylate kinase [gamma proteobacterium NOR51-B] Length = 208 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 6/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G F++ EG EG GK+T++ + + L+ + D+ VTREPGGTP AEA R +L+S D Sbjct: 1 MKPGQFLTVEGGEGVGKSTNLDFIAKTLRAQGIDLVVTREPGGTPLAEALRALLISDSED 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++ AAR H+ VI PAL G+ +LCDRF D+++AYQG + +++L Sbjct: 61 PPCPNAELLMIFAARAQHLSTVIEPALKAGRWVLCDRFTDATFAYQGAGRGIEWSSIETL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T++LD+ IG+ R +R LD FER+ + ++ R+ + Sbjct: 121 ENLIQGDRRPDLTLLLDMEPAIGMDRAGSR------GALDRFEREALPFFDRVRRGYKTR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R ++D++ S +V +I ++ EL Sbjct: 175 AAQAPHRYRVIDASQSIDAVQRDIARVLAEL 205 >gi|297566850|ref|YP_003685822.1| thymidylate kinase [Meiothermus silvanus DSM 9946] gi|296851299|gb|ADH64314.1| thymidylate kinase [Meiothermus silvanus DSM 9946] Length = 202 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 122/207 (58%), Gaps = 20/207 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVD 60 SG FI+FEG EGAGK+T + LL +L+ + +V +TREPG G E R VLLS + Sbjct: 2 SGWFITFEGPEGAGKSTQVKLLAPWLEAQGREVVLTREPGNGGWLGVEVRRLVLLS---E 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EAE ++++A R +HV VI PAL GK++LCDR+LDSS AYQG + L L L Sbjct: 59 PMSPEAEYLLYSADRAEHVRRVIAPALAAGKVVLCDRYLDSSLAYQG---YGRGLDLGWL 115 Query: 121 QEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + ++V Q + P T +LDLP ++GL R R D ER+ + H++ R + Sbjct: 116 RAVAVGVTQGLKPHRTFLLDLPPEVGLARFAGR---------DRLEREPLEFHQRVRAGY 166 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L++A+ +P R ++D+ S +++ + Sbjct: 167 LELAKAEPQRFVVLDATQSPEAIQAEL 193 >gi|229917431|ref|YP_002886077.1| thymidylate kinase [Exiguobacterium sp. AT1b] gi|259494270|sp|C4KZW9|KTHY_EXISA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229468860|gb|ACQ70632.1| thymidylate kinase [Exiguobacterium sp. AT1b] Length = 212 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 120/215 (55%), Gaps = 12/215 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+ EG +G+GK+T + LL L++K YD+ VTREPGGT R VLLS E Sbjct: 2 SGMFITVEGPDGSGKSTQLQLLVENLKQKGYDIVVTREPGGTTVGNQIREVLLSPDHHEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDS 119 E +++AA+R +VE VIRPAL G I+LCDRF+D+S AYQG + D Q + S Sbjct: 62 TPRVEMMLYAASRAQNVEQVIRPALERGAIVLCDRFIDASIAYQGYGLQYDLDQ---IRS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T + DL + R+++R LD E +D HE+ F Sbjct: 119 LNEWATNGLTPDLTFLFDLNPERASARMKDR------GQLDRIESRDQAFHERVYAGFQT 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P+R +D+ S + + +L+ E +Q+ Sbjct: 173 LLKQYPERIVRIDADQSIECIQDEVLDYTIERLQQ 207 >gi|218781657|ref|YP_002432975.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01] gi|218763041|gb|ACL05507.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01] Length = 220 Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 124/223 (55%), Gaps = 9/223 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EGIEGAGKTT + + F++ + Y+ TREPGGT R +LL+ Sbjct: 5 GVFITLEGIEGAGKTTQVGRILEFMESQGYECISTREPGGTGIGAKIRAILLNSEHVTLA 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ A R H+ +I+PAL GK ++CDRF D++ AYQG F++ L Sbjct: 65 PLAELLLYEADRAQHLARLIKPALEAGKCVVCDRFCDATTAYQGYARELSLDFINELHAR 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIAR 182 + + PD T++ DLP +IGL R + R + + + FE +D+ H K RQ +L +A+ Sbjct: 125 ILDGLTPDLTLLFDLPAEIGLSRAKTRLHEQNNTSQEGRFEAEDLAFHRKVRQGYLTLAK 184 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 +P R IV+ A + VWE ++ ++ ++K+++ Sbjct: 185 AEPGRFAIVN--------ADAAPDRVWEETKELLAEFTAKRNL 219 >gi|126729338|ref|ZP_01745152.1| thymidylate kinase [Sagittula stellata E-37] gi|126710328|gb|EBA09380.1| thymidylate kinase [Sagittula stellata E-37] Length = 212 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 81/217 (37%), Positives = 119/217 (54%), Gaps = 14/217 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SGLF+SFEGI+G+GK+T +L L +TREPGG+P AE R ++L D Sbjct: 6 HSGLFLSFEGIDGSGKSTQARMLAERLSADGMTALLTREPGGSPGAEEIRALVLQGDPDR 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLD 118 + E E ++F AAR DH+E IRPAL G++++CDRF DS+ YQG RD+ +D Sbjct: 66 WSPETELLLFTAARRDHMERTIRPALTRGEVVICDRFADSTRLYQGRQGLRDT-----VD 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + + + PD TIILD+ + GL R + R + E FE + + + R FL Sbjct: 121 KLHNLMIG-MEPDLTIILDMDPEAGLSRAKARATAEER-----FEDFGIALQLQMRAGFL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ P R ++D + VA +I V E + R Sbjct: 175 ALSEEFPARIRVIDGNRRPEYVAADIHATVMEALDAR 211 >gi|84686498|ref|ZP_01014391.1| thymidylate kinase [Maritimibacter alkaliphilus HTCC2654] gi|84665411|gb|EAQ11888.1| thymidylate kinase [Rhodobacterales bacterium HTCC2654] Length = 207 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 75/191 (39%), Positives = 108/191 (56%), Gaps = 6/191 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEGI+G+GK+T LL L+ + DV TREPGG+P AE R ++L D + Sbjct: 2 TGHFITFEGIDGSGKSTQARLLAEALKAEGRDVVATREPGGSPGAEEIRRLVLEGDPDRW 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E +I P+L GKI++CDRF DS+ YQG R +D L Sbjct: 62 SAETEILLFTAARRDHLERLIDPSLAAGKIVICDRFADSTRMYQGLRGPGLRKVVDDLHR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T I+D+ G R + R E FE + + R+ FL +A+ Sbjct: 122 LMIGR-EPDLTFIIDMDPTTGHARAKGRNGTEE-----RFEDFGADLQVQMREGFLALAK 175 Query: 183 NQPDRCHIVDS 193 +P RC ++D Sbjct: 176 AEPGRCVVIDG 186 >gi|303257416|ref|ZP_07343429.1| dTMP kinase [Burkholderiales bacterium 1_1_47] gi|302859773|gb|EFL82851.1| dTMP kinase [Burkholderiales bacterium 1_1_47] Length = 202 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 11/205 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+T ++ L+ + D TREPGG +AE R +LL+ + Sbjct: 5 GKFITVEGVDGAGKSTQFEVIANALKERGIDFVRTREPGGPQSAEKIRELLLN---EPMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+ E +V AAR +++ +IRPAL GK +LCDRF D+S AYQG ++ L Sbjct: 62 AKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLANF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T+I DLP ++ R+ + LD FE++D H + RQ +L+IA+ Sbjct: 122 VHPDIKPDKTVIFDLPTEVAAARLSRK--------LDRFEQEDADFHRRVRQGYLEIAKR 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+RC ++D+ + + V+ +L V Sbjct: 174 EPERCVVIDAQGTPEEVSARVLKEV 198 >gi|296453337|ref|YP_003660480.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301] gi|296182768|gb|ADG99649.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301] Length = 233 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 128/220 (58%), Gaps = 15/220 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL GVD Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ G R+ + + Sbjct: 61 AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + ++PD T +LD+ + R+++ ESA + R RQ F Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPVLSHNRLEHAEDRMESAGSGFQSRT--------RQAF 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 LD+A +P+R H++D++ S + V + I + L++ V+ Sbjct: 172 LDLAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211 >gi|171463583|ref|YP_001797696.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193121|gb|ACB44082.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 211 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 125/213 (58%), Gaps = 22/213 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGV 59 ++G FISFEGI+GAGK+THI + +Q + N +V +TREPGGT E R++LL + Sbjct: 4 HTGYFISFEGIDGAGKSTHIDAFRNLIQERYPNIEVVMTREPGGTVLGEQLRNLLLDTPM 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E EA++ AAR +H+ VI+PAL GKI++ DRF D+S+AYQG + L L Sbjct: 64 N---LETEALLMFAARREHLSQVIKPALTAGKIIISDRFTDASFAYQG---GGRGLSLAK 117 Query: 120 LQEIS--VQE------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L ++ VQ + P+ TI+ DLP DI R ++ D FE+ D+ E Sbjct: 118 LNDLERWVQGQPDGSILQPNLTILFDLPGDIAEARRSKVHT------PDKFEKMDLSFFE 171 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + RQ +L A++ PDR H+VD+ + +++ + Sbjct: 172 RVRQEYLRRAKDDPDRFHLVDATQTPEAIWNGL 204 >gi|331005272|ref|ZP_08328664.1| Thymidylate kinase [gamma proteobacterium IMCC1989] gi|330420949|gb|EGG95223.1| Thymidylate kinase [gamma proteobacterium IMCC1989] Length = 211 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 115/201 (57%), Gaps = 6/201 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F++ EG EG GK+T+I+ ++ +L + +V TREPGGTP AE R +LL ++ Sbjct: 8 GKFLTIEGTEGVGKSTNIAYIQSYLTSQGIEVLTTREPGGTPLAEDIRELLLQNRDEKMD 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR H++ VI PAL G+ +LCDRF D++YAYQG ++ L++ Sbjct: 68 ETAELLLVFAARAQHLQTVILPALERGQWVLCDRFTDATYAYQGGGRGLDLALIEMLEQR 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T++LD+ V IGL+R R LD FE + V EK R +L A Sbjct: 128 IQGDIRPDLTLLLDIDVTIGLERAGRR------GELDRFEHEHVAFFEKVRHAYLARAAT 181 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 P+R +VD++ S + V + Sbjct: 182 FPERYGVVDASQSLEQVQLQV 202 >gi|120602139|ref|YP_966539.1| dTMP kinase [Desulfovibrio vulgaris DP4] gi|166221739|sp|A1VCE6|KTHY_DESVV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120562368|gb|ABM28112.1| thymidylate kinase [Desulfovibrio vulgaris DP4] Length = 224 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 3/206 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T + L +LQ+ + V VTREPGG+ R +LL G + Sbjct: 1 MFITFEGIEGSGKSTALQGLAAWLQQHGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV V+RPAL EG ++L DR+ DS+ YQG + L +++ Sbjct: 61 EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHEKRRQIFLDIAR 182 V + PD TI+LDL + GL R R ++RE A FE + + H + R+ +L A Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALAR-NIREGMHAAEGRFEAESLAFHTRVREGYLTWAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 R +VD+ S + V +++ IV Sbjct: 180 LHGGRYRVVDATQSPEDVVRDVVGIV 205 >gi|312109177|ref|YP_003987493.1| thymidylate kinase [Geobacillus sp. Y4.1MC1] gi|311214278|gb|ADP72882.1| thymidylate kinase [Geobacillus sp. Y4.1MC1] Length = 210 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 123/215 (57%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F SFEG EGAGKTT I++L+ FL+ K +DV TREPGG AE R ++L+ E Sbjct: 3 GRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEMD 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AAAR H+ I PA+ GKI+LCDRF+DSS AYQG ++ L +D + +I Sbjct: 63 GRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQG---FARELGMDEILQI 119 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ P TI D+ +GL+R+Q RE LD +++ H K R+ +L + Sbjct: 120 NQFAIDGYFPTLTIYFDIDPKMGLERIQKNKQ-REMNRLDM---ENLSFHYKVREGYLKL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A+ DR +D++ S V + + + + +R Sbjct: 176 AKRFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210 >gi|16801901|ref|NP_472169.1| thymidylate kinase [Listeria innocua Clip11262] gi|23821794|sp|Q927E8|KTHY_LISIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|16415376|emb|CAC98067.1| lin2841 [Listeria innocua Clip11262] Length = 208 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + ++ D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD + L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + I + Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQNGYEKIIQM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 PDR VD+ + + + T IL Sbjct: 179 FPDRFMRVDATKTPEEITTIIL 200 >gi|291517602|emb|CBK71218.1| thymidylate kinase [Bifidobacterium longum subsp. longum F8] Length = 206 Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 15/215 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL GVD Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ G R+ + + Sbjct: 61 AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + ++PD T +LD+ + R+++ ESA D+ R RQ F Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQAF 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD+A +P+R ++D++ S ++V I + + EL Sbjct: 172 LDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206 >gi|77460373|ref|YP_349880.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1] gi|123603687|sp|Q3K8L5|KTHY_PSEPF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77384376|gb|ABA75889.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1] Length = 210 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 84/212 (39%), Positives = 116/212 (54%), Gaps = 8/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +GLFI+ EG EGAGK+T+ L L+ +V +TREPGGTP AE R VLL+ VDE Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVVLTREPGGTPLAERIREVLLAP-VDEV 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E ++ AAR H+ VIRPAL G ++LCDRF DS+YAYQG + +L+ Sbjct: 61 MNPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSLERIAALE 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+I DLPV+IGL R R LD FE + E R FL A Sbjct: 121 TFVQGDLRPDLTLIFDLPVEIGLARASAR------GRLDRFELEGREFFEAVRNAFLKRA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P R +D+ V ++ ++ L++ Sbjct: 175 EDDPARYVRIDAGQPLVKVQQSLDTLIPNLLE 206 >gi|114320572|ref|YP_742255.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1] gi|122311744|sp|Q0A8S2|KTHY_ALHEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|114226966|gb|ABI56765.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1] Length = 217 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 113/204 (55%), Gaps = 5/204 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG+EGAGK+T ++ ++ +LQR+ D +TREPGGTP E R +LL Sbjct: 1 MTRGRFITLEGLEGAGKSTALTRVREYLQRQGIDAVMTREPGGTPLGERIRALLLGQSEP 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++ AAR +H++ I PAL G+ ++CDRF D+SYAYQG + +L Sbjct: 61 PMAPATEALLMFAARSEHLDKRIWPALERGQWVVCDRFTDASYAYQGWGRGLGAERIAAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + + PD T+ LD+PV+ GL R R D FE++ E+ + + + Sbjct: 121 EDWTQGALRPDLTLWLDVPVETGLARAAGR-----GEAPDRFEQERDGFFERVHEGYAAL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A P+R VD+ ++V T + Sbjct: 176 AERFPERIRRVDAGQPLEAVLTAL 199 >gi|308176312|ref|YP_003915718.1| dTMP kinase [Arthrobacter arilaitensis Re117] gi|307743775|emb|CBT74747.1| dTMP kinase [Arthrobacter arilaitensis Re117] Length = 217 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 119/204 (58%), Gaps = 4/204 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI FEG +GAGKTT +++ +++L+ + V TREPGGT +E R ++L G E Sbjct: 11 GLFIVFEGGDGAGKTTQVAMAQQWLESRGATVRTTREPGGTQISEELRSLVLEHGHGEID 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA++++AAR HV+ VIRP+L G ++CDRF+DSS AYQG + S+ + Sbjct: 71 ARTEALIYSAARAAHVQQVIRPSLEAGTHIICDRFVDSSLAYQGMGRELGFAAVASINDF 130 Query: 124 SVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TIILD+ + G +R+ + +S D E + HE+ R FL++A Sbjct: 131 ATGGLKPDVTIILDISAEHGRARRIAASGGVEDS---DRLEAEPDDFHERIRNAFLELAA 187 Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206 P R ++D+ S + + +I+ Sbjct: 188 QDPQRYLVLDATASVEQLHQSIVE 211 >gi|114330554|ref|YP_746776.1| dTMP kinase [Nitrosomonas eutropha C91] gi|122314450|sp|Q0AIL5|KTHY_NITEC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|114307568|gb|ABI58811.1| thymidylate kinase [Nitrosomonas eutropha C91] Length = 215 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 117/208 (56%), Gaps = 7/208 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGI+GAGK+TH++ L FL+ K +V VTREPG T E R +LL Sbjct: 1 MQRGKFITFEGIDGAGKSTHLAWLASFLRDKGLEVIVTREPGSTALGEQLRQLLLDH-RQ 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE E ++ AAR +H++ VI PAL G ++ DRF D+S+AYQG L+ L Sbjct: 60 AMHAETETLLMFAARREHLDKVILPALERGAWVISDRFTDASFAYQGGGRGVPSARLEIL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T+ D+PV I +RVQ+ + D FE + + E+ RQ +L Sbjct: 120 EQWVQKGFSPDLTVYFDVPVTISRQRVQS------ARTADRFELEPDLFFERVRQAYLQR 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A+ +R +VD + S + V T ++ +V Sbjct: 174 AKQFSERIRVVDGSLSLEEVRTAMVEVV 201 >gi|206891148|ref|YP_002248232.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743086|gb|ACI22143.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 209 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 113/204 (55%), Gaps = 7/204 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+FEGIEG+GKTT LL L+++ V T EPG T A R +LL+ + Sbjct: 1 MNKGIFITFEGIEGSGKTTQGKLLAEKLKKEGLKVLYTYEPGDTEAGRHIRKILLNSEI- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++ A R+ H+E I+P + G I++CDRF DS+ YQG + L Sbjct: 60 KINPLCELLLYFADRVQHIEEKIKPCIESGFIVICDRFTDSTLVYQGYARGISIDLIKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I + E MPD T++LD P +IGLKR Q D FE +++ HEK RQ +L + Sbjct: 120 NKIVLDEFMPDLTVLLDCPANIGLKRNQKINK------KDRFEMENLAFHEKVRQGYLKL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A R ++D+ S +A +I Sbjct: 174 AELYKKRFFVLDATESIDKIAEDI 197 >gi|225166283|ref|ZP_03727978.1| dTMP kinase [Opitutaceae bacterium TAV2] gi|224799474|gb|EEG18008.1| dTMP kinase [Opitutaceae bacterium TAV2] Length = 234 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 128/216 (59%), Gaps = 11/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDE 61 +G IS EG EG GK+T I+ L + +Q DV TREPGGT E R++++ + DE Sbjct: 9 TGKLISLEGPEGCGKSTQIARLAKHIQLLGRDVFCTREPGGTEIGEQVRNIIVHNSKGDE 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119 AE E ++FAA+R V VI P L+ G+I+L DRFLDSS YQG +++L +D Sbjct: 69 MCAETELLLFAASRAQLVREVIAPRLLRGEIVLSDRFLDSSTVYQG---VARNLAMDPVN 125 Query: 120 -LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + +V VMPD TIILD+P ++ L R+ NR R S D ER+++ + K R+ +L Sbjct: 126 LINQFAVGNVMPDLTIILDVPPEVSLARI-NR---RASDLPDRMERENIDFYHKVREGYL 181 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A++ P ++D + VA +I + V +L+ K Sbjct: 182 FLAKSLPRAFLVLDGTQTEDEVAKHIWDEVLKLITK 217 >gi|78357381|ref|YP_388830.1| thymidylate kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552103|sp|Q30YW1|KTHY_DESDG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78219786|gb|ABB39135.1| thymidylate kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 212 Score = 139 bits (349), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 7/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T ++ LK +LQ + +TREPGG+ R +LL G D+ Sbjct: 1 MFITFEGIEGSGKSTALARLKDWLQEHGHGATLTREPGGSRLGGILRSILLDIGNDDLTG 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++ A R HV VIRPAL EG ++ DR+ DS+ YQG L L +++ Sbjct: 61 ETELFLYLADRSQHVHQVIRPALAEGVAVISDRYADSTVVYQGYGRGLDPALLHRLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE--SACLDYFERKDVMIHEKRRQIFLDIAR 182 V+ + PD T++ DL +IGLKR R +LRE A FE + + H + R+ +L A Sbjct: 121 VRGLWPDLTLLFDLEPEIGLKRATTR-NLREGTGATEGRFEAESLAFHTRVREGYLTWAA 179 Query: 183 NQPDRCHIVDSAHS----FQSVATNILNI 207 +R I+D+A S F+ V + + ++ Sbjct: 180 LNKERFRIIDAAASPDEVFEQVRSAVADV 208 >gi|197119572|ref|YP_002139999.1| thymidylate kinase [Geobacter bemidjiensis Bem] gi|229621737|sp|B5E9M9|KTHY_GEOBB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|197088932|gb|ACH40203.1| thymidylate kinase [Geobacter bemidjiensis Bem] Length = 225 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 84/217 (38%), Positives = 122/217 (56%), Gaps = 4/217 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT + LLK L+ V VTREPGG P A+ R +LL Sbjct: 2 GFFITFEGIEGCGKTTQLRLLKERLEAAGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV+ VI PAL G+ +LCDRF D++ AYQG ++ L + Sbjct: 62 PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLTVIEELNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V P T+++D PV++GL R R A + FER+ ++ H+K R +L +A Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRNGYLTLAAA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 P+R +VD + + T +L V E +++R+ L Sbjct: 182 FPERFVVVDGSGDVRQ--TGLL--VAEALRQRMQSLG 214 >gi|219849803|ref|YP_002464236.1| dTMP kinase [Chloroflexus aggregans DSM 9485] gi|219544062|gb|ACL25800.1| dTMP kinase [Chloroflexus aggregans DSM 9485] Length = 225 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 79/226 (34%), Positives = 123/226 (54%), Gaps = 5/226 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+FEG EGAGK+T L LQ Y V +TREPGGT E R +L+ Sbjct: 1 MHRGLFITFEGPEGAGKSTQARRLYERLQAAGYPVILTREPGGTRIGELIRRILIDLRHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++F+AAR V +IRP L G I++CDR+ DS++AYQG L + Sbjct: 61 EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRVI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEKRRQI 176 E++ + PD T L + V+IGL+R Q+ E A + + +D+ H + Sbjct: 121 TEVATGGLKPDLTFYLQIDVEIGLQRKQHARERSERGGQPAEWNRLDARDLAYHRRVMHG 180 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 F+++ + +P+R H +D+ +A I + V L+ R++PL+++ Sbjct: 181 FVELMKQEPERWHALDADQPVDELAEQIWHAVMPLL-DRITPLATR 225 >gi|126668139|ref|ZP_01739101.1| thymidylate kinase [Marinobacter sp. ELB17] gi|126627409|gb|EAZ98044.1| thymidylate kinase [Marinobacter sp. ELB17] Length = 209 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG GK+T ++ L+ +V VTREPGGTP AEA R +LL+ + Sbjct: 5 GRFITFEGTEGMGKSTQLATAAASLRAVGINVLVTREPGGTPMAEAIRELLLAPRDEPVH 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR H+ I PAL G+ +LCDRF D+++AYQG + + L+ + Sbjct: 65 ELTELLLMFAARAQHLHTRILPALTAGQWVLCDRFTDATFAYQGGGRGTPAERIGLLETL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 E+ PD ++LD PV+ G+ R + R LD FE++ V + R +L AR+ Sbjct: 125 VQGELRPDHIVLLDAPVETGMARARKRGE------LDRFEQETVEFFARIRATYLQRARH 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R HIVD+ V+ ++ + E+V Sbjct: 179 DPQRYHIVDAGQPLARVSADVKRLFQEIV 207 >gi|323342269|ref|ZP_08082501.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463381|gb|EFY08575.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 207 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 123/207 (59%), Gaps = 12/207 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF+SFEG +G+GKTT ++ + ++KN V TREPGG +E R ++L +E Sbjct: 3 LFVSFEGPDGSGKTTITKIVSEYFEKKNQPVLCTREPGGIRISEKIRELILDPEHEEMDD 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 EA+++AA+R H+ I+PAL G++++CDRF+DSS AYQG ++ + +D + +I Sbjct: 63 RTEALLYAASRRQHLIEKIKPALGRGELVICDRFVDSSLAYQG---YARGIGIDDVWDIN 119 Query: 124 --SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ +PD TI LDL + GLKR+ R D E + + HEK Q + ++ Sbjct: 120 MFAIDGFLPDLTIFLDLKPEEGLKRIGVR------GYKDRLELEGDVFHEKVYQGYQEVI 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 R P+R IVD+A S + VA +++ I+ Sbjct: 174 RRFPNRIKIVDAAQSIEDVAADVIKII 200 >gi|158319119|ref|YP_001511626.1| dTMP kinase [Alkaliphilus oremlandii OhILAs] gi|158139318|gb|ABW17630.1| dTMP kinase [Alkaliphilus oremlandii OhILAs] Length = 210 Score = 138 bits (348), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG +G+GK+T I +KRFL+ K Y V +TREPGGT E R ++L Sbjct: 1 MHKGLFITIEGPDGSGKSTQIHFIKRFLEEKGYKVVLTREPGGTVIGEKIRELVLDKNHK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HV I PA+ EG I+LCDRF+DSS YQG+ + + Sbjct: 61 EMANVTEALLYAASRAQHVAQRIIPAIEEGSIVLCDRFVDSSIVYQGKGRGLGVENIRDI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD TI+LD+ +IG++R + S +E+ D E++ + H + ++ Sbjct: 121 NDFATMGLKPDLTILLDIDPEIGIERAK---SAKEA---DRLEQEKIDFHRIVYDGYKEL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R +VD+ S + V+ I I+ +++ Sbjct: 175 VQMYPERIKVVDANQSIEEVSKGIEYILNKIL 206 >gi|254483666|ref|ZP_05096886.1| thymidylate kinase [marine gamma proteobacterium HTCC2148] gi|214036077|gb|EEB76764.1| thymidylate kinase [marine gamma proteobacterium HTCC2148] Length = 215 Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+ EG EG GK+T+++ +++ L D+ VTREPGGT E R +LL + Sbjct: 3 SRGLFITVEGGEGVGKSTNMAYMQQHLTDLGIDLLVTREPGGTALGEDIRELLLRPRQES 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE ++ AAR H+E V+ PAL G+ +LCDRF D++YAYQG + L+ Sbjct: 63 MASGAELLLIFAARAQHLEQVVEPALANGRWVLCDRFTDATYAYQGGGRGLAVTMIRELE 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ E+ PD T++LD PV +G+ R RE LD FE + E+ R +L +A Sbjct: 123 QLVQGELRPDYTLLLDAPVAVGMSRA------RERGELDRFELEQTAFFERVRASYLQLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R +VD++ V + I EL Sbjct: 177 SESSGRYRVVDASKELVEVEQQLQEICSEL 206 >gi|294056288|ref|YP_003549946.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221] gi|293615621|gb|ADE55776.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221] Length = 209 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 85/218 (38%), Positives = 124/218 (56%), Gaps = 15/218 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEG EG GK+T I L L+ + DV TREPGGTP +EA R++L DE G Sbjct: 3 GLFISFEGSEGCGKSTQIRALASRLEAEGIDVVRTREPGGTPLSEAIRNLLQH---DEAG 59 Query: 64 ----AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 AEAE ++FAAAR VI PA GK +L DRF+DS+ YQG + H + + Sbjct: 60 EGMCAEAELLLFAAARAQLTREVIAPARRAGKAVLSDRFMDSTTVYQGVARALAHDDVAA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +V PD TI++DL ++GL+RV+ R LD ER+ + + RQ +L Sbjct: 120 INQFAVGTHKPDLTILIDLDPEVGLQRVKA----RSGGQLDRMEREALDFFQAVRQGYLA 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A + R ++D H+ +++ I W V++R++ Sbjct: 176 LAEQESKRFLVLDGNHTIEALEQEI----WNAVRQRLT 209 >gi|160871899|ref|ZP_02062031.1| thymidylate kinase [Rickettsiella grylli] gi|159120698|gb|EDP46036.1| thymidylate kinase [Rickettsiella grylli] Length = 218 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 12/207 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEFG 63 FI+ EGIEG GK+T + + +LQ+ + + +TREPGGTP AEA R +LL + Sbjct: 8 FITLEGIEGVGKSTQLKFVADYLQQAHIPLTITREPGGTPIAEAIRSLLLQSDFSPEMLI 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++F AAR H+ VI+PAL G +LCDRF ++SYAYQG F+ SL Sbjct: 68 PETELLLFFAARAQHIHYVIKPALQRGDWVLCDRFTETSYAYQGGGRGIDVAFIRSLHLW 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 Q++ + ++LD PVDI L+R+++R + E+ D+F R R +L+ A Sbjct: 128 VQQDLNVNVVLLLDAPVDIALRRMRHRKTADRIEAEKHDFFTRA--------RASYLERA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +PD ++D++ S + V I N++ Sbjct: 180 QQRPDVYQVIDASRSLKDVQKQIKNVL 206 >gi|53803739|ref|YP_114428.1| thymidylate kinase [Methylococcus capsulatus str. Bath] gi|59798160|sp|Q606M0|KTHY_METCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53757500|gb|AAU91791.1| thymidylate kinase [Methylococcus capsulatus str. Bath] Length = 208 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 8/216 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T++ + L+ + V TREPGGT EA R + L D Sbjct: 1 MTPGKFITLEGGEGVGKSTNVDFVVSRLRARGLKVVATREPGGTAFGEAVREIFLRQ--D 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EAE ++ AAR+ H+ VI PAL G ++CDRF D+SYAYQG +D L Sbjct: 59 TVRPEAELLLLFAARVHHLREVIEPALRRGDWVVCDRFTDASYAYQGAGRGIAPGVIDFL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++LD PVD GLKR R + D ER+D + R+ +L + Sbjct: 119 RDWIQAGLRPDLTLLLDAPVDTGLKRAHQR------SGPDRLEREDSAFFARVREGYLAL 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 AR +P R ++D+ V T I V L+ V Sbjct: 173 ARAEPGRIRVIDADRPLALVQTAIATQVDSLLAGHV 208 >gi|260575561|ref|ZP_05843559.1| thymidylate kinase [Rhodobacter sp. SW2] gi|259022204|gb|EEW25502.1| thymidylate kinase [Rhodobacter sp. SW2] Length = 209 Score = 138 bits (347), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 115/206 (55%), Gaps = 6/206 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEGI+G+GK+T LL L++ + V TREPGG+P AE R ++L D Sbjct: 1 MALGRFISFEGIDGSGKSTQSRLLAESLRKLGHSVCQTREPGGSPGAEEIRRLVLEGDPD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E IRPAL G++++ DRF DS+ YQG ++ L Sbjct: 61 RWSAETEILLFTAARRDHLEKTIRPALARGEVVITDRFADSTRMYQGISRGDLGPLVNRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + V PD T+++DL +GL R R + FE + + K R FL + Sbjct: 121 HDLMIG-VEPDLTLLIDLDPALGLNRAVARAGAEQ-----RFEDMGLALQIKMRAGFLAL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 A P+R ++D ++VA ++L Sbjct: 175 AAAHPERFRVIDGNRPPEAVAADVLG 200 >gi|194018013|ref|ZP_03056620.1| thymidylate kinase [Bacillus pumilus ATCC 7061] gi|194010350|gb|EDW19925.1| thymidylate kinase [Bacillus pumilus ATCC 7061] Length = 212 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+FEG EGAGKTT I + ++R+ Y V TREPGG AE R V+L+ + Sbjct: 2 SGMFITFEGPEGAGKTTVIRKVYEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 A+ EA+++AAAR H+ + PAL G+ +LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQG---YARGLGIDQVRS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ MP TI + + GLKR+ RE LD + + H+ R+ + Sbjct: 119 INDFAIDGTMPQMTIYFSITPEEGLKRIHANQG-REKNRLDM---ETLNFHQLVREGYEL 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P+R H+VD++ Q V +L ++ + ++K Sbjct: 175 LIAQSPERFHVVDASQPMQDVYEEVLRVIQDTLKK 209 >gi|163738563|ref|ZP_02145977.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107] gi|161387891|gb|EDQ12246.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107] Length = 229 Score = 138 bits (347), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEGI+G+GK+T LL LQ + +V +TREPGG+ AE R ++L D + Sbjct: 18 GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L + Sbjct: 78 AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TI++D+ GL R + R E FE + + ++ R FL +A Sbjct: 138 MIGH-EPDLTILIDMNPSKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 DR ++D + VA ++L +V Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVV 216 >gi|87122703|ref|ZP_01078578.1| Thymidylate kinase [Marinomonas sp. MED121] gi|86162000|gb|EAQ63290.1| Thymidylate kinase [Marinomonas sp. MED121] Length = 208 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 7/200 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG+GK+T I +K +L+ +N + +TREPGGTP AE R+++LS + Sbjct: 1 MIKGKFITLEGGEGSGKSTCIKYIKAWLESQNIEYIITREPGGTPLAEEIRNMILSHREE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E E ++ AAR H++ I+PA+ GK ++ DRF+DSSY YQG +D L Sbjct: 61 KIHDETELLLMFAARTQHIKEKIKPAIDAGKWVISDRFVDSSYVYQGAARGGDLKKIDQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +Q PD T++ D+PVDIGL RV+ R A D + + V+ H+ R FL Sbjct: 121 AEWVLQGCKPDKTLLFDVPVDIGLSRVEKR------AQSDRLDDEPVVFHQMVRDAFLAR 174 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + C ++D++ ++V Sbjct: 175 EKTSNHYC-LIDASQPIENV 193 >gi|83943051|ref|ZP_00955511.1| thymidylate kinase [Sulfitobacter sp. EE-36] gi|83846059|gb|EAP83936.1| thymidylate kinase [Sulfitobacter sp. EE-36] Length = 212 Score = 137 bits (346), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 113/205 (55%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEGI+G+GK+T LLK L+ + V +TREPGG+ AE R ++L D + Sbjct: 7 GLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSAGAEEIRALVLQGDPDRWS 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E ++F AAR DH+E I PAL GKI++CDRF DS+ YQG +D L + Sbjct: 67 ARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHSL 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V PD T+++D+ GL R +R ++ E FE + R FL +A Sbjct: 127 MIG-VEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAAE 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 PDR ++ A S +VA ++ V Sbjct: 181 FPDRFVTINGAQSIDAVAADVFAQV 205 >gi|303241047|ref|ZP_07327557.1| thymidylate kinase [Acetivibrio cellulolyticus CD2] gi|302591472|gb|EFL61210.1| thymidylate kinase [Acetivibrio cellulolyticus CD2] Length = 206 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 118/205 (57%), Gaps = 8/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT I L++ +L+ K ++V VTREPGGT E R ++L Sbjct: 1 MKRGLFITTEGTDGSGKTTQIKLIESYLKGKGFEVVVTREPGGTSIGEKIRSIILDTENS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++A+AR V +I+P+L EGK+++CDRF+DSSY YQG + ++ + Sbjct: 61 DMAYITEMMLYASARAQLVNELIKPSLSEGKVVICDRFIDSSYVYQGFGRNIDIELIERV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGL-KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I++ +MPD T+ D+ ++ L +R+Q S D ER+ + H K + Sbjct: 121 NRIALDGIMPDVTLFFDIDPEVALERRIQ-------STGADRIEREAMDFHRKVYNGYKK 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A PDR ++S + + + +++ Sbjct: 174 LASMYPDRIKAIESNRNIEEIFSDV 198 >gi|317483375|ref|ZP_07942367.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA] gi|322690345|ref|YP_004219915.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217] gi|316915192|gb|EFV36622.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA] gi|320455201|dbj|BAJ65823.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217] Length = 206 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 84/215 (39%), Positives = 125/215 (58%), Gaps = 15/215 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 SGLF+SFEG++G GKTT + L +L+ + V VTREPGGT +A R +LL GVD Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLHAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGG 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ G R+ + + Sbjct: 61 AVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EI 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + ++PD T +LD+ + R+++ ESA D+ R RQ F Sbjct: 120 RSLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQAF 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD+A +P+R ++D++ S ++V I + + EL Sbjct: 172 LDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206 >gi|226356637|ref|YP_002786377.1| dTMP kinase (thymidylate kinase) [Deinococcus deserti VCD115] gi|226318627|gb|ACO46623.1| putative dTMP kinase (thymidylate kinase) [Deinococcus deserti VCD115] Length = 218 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 84/220 (38%), Positives = 119/220 (54%), Gaps = 15/220 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDEFG 63 FISFEG EGAGK+T I+ L L+ ++ VTREPGGTP R VLL +D Sbjct: 12 FISFEGPEGAGKSTQIARLVARLEERSVPHTVTREPGGTPLGTRVREVLLDPDLSIDPL- 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++++A+R V +VIRPAL +G ++CDR+ DSS AYQG L L Sbjct: 71 --PEFLLYSASRAQLVTHVIRPALTQGHTVICDRYFDSSLAYQGAGRGLPVRLLRDLTRE 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LDL +GL+RV +R D ER D+ H++ RQ FLD+A Sbjct: 129 ATGGLTPDLTVLLDLDPALGLQRVASR------GQADRLERADLGFHQRVRQGFLDLAAA 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++D+ S +A I W V++ + SS Sbjct: 183 EPGRFLVLDATRSVDELAREI----WTAVERWLPCTSSSP 218 >gi|163743050|ref|ZP_02150433.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10] gi|161383733|gb|EDQ08119.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10] Length = 229 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 114/205 (55%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEGI+G+GK+T LL LQ + +V +TREPGG+ AE R ++L D + Sbjct: 18 GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L + Sbjct: 78 AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TI++D+ GL R + R E FE + + ++ R FL +A Sbjct: 138 MIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 DR ++D + VA ++L +V Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVV 216 >gi|157690810|ref|YP_001485272.1| thymidylate kinase [Bacillus pumilus SAFR-032] gi|166987700|sp|A8F8Z5|KTHY_BACP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157679568|gb|ABV60712.1| dTMP kinase [Bacillus pumilus SAFR-032] Length = 212 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+FEG EGAGKTT I + ++R+ Y V TREPGG AE R V+L+ + Sbjct: 2 SGMFITFEGPEGAGKTTVIRKVHEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 A+ EA+++AAAR H+ + PAL G+ +LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQG---YARGLGIDQVRS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ MP TI + + GLKR+ RE LD + + H+ R+ + Sbjct: 119 INDFAIDGTMPQMTIYFSITPEEGLKRIHANQG-REKNRLDM---ETLNFHQLVREGYEL 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P+R H+VD++ Q V +L ++ + ++K Sbjct: 175 LIAQSPERFHVVDASKPMQDVYEEVLRVIQDTLKK 209 >gi|227545645|ref|ZP_03975694.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622679|ref|ZP_04665710.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133481|ref|YP_004000820.1| tmk [Bifidobacterium longum subsp. longum BBMN68] gi|322688333|ref|YP_004208067.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F] gi|46576601|sp|Q8G6Z6|KTHY_BIFLO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|227213761|gb|EEI81600.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514676|gb|EEQ54543.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311772719|gb|ADQ02207.1| Tmk [Bifidobacterium longum subsp. longum BBMN68] gi|320459669|dbj|BAJ70289.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F] Length = 206 Score = 137 bits (346), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 127/217 (58%), Gaps = 16/217 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL GVD Sbjct: 1 MN-GLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVD 58 Query: 61 ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHL 115 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ G R+ + Sbjct: 59 GGAVDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE- 117 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + SL + ++PD T +LD+ + R+++ ESA D+ R RQ Sbjct: 118 EIRSLSMWATNNLLPDRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQ 169 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 FLD+A +P+R ++D++ S ++V I + + EL Sbjct: 170 AFLDLAAAEPNRFRVIDASQSIEAVWAAIESDIKELA 206 >gi|149182688|ref|ZP_01861155.1| thymidylate kinase [Bacillus sp. SG-1] gi|148849598|gb|EDL63781.1| thymidylate kinase [Bacillus sp. SG-1] Length = 214 Score = 137 bits (346), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG EGAGK+T I + L K ++V +TREPGG AE R V+L Sbjct: 1 MKQGLFITVEGPEGAGKSTIIKKMADELTEKGHEVILTREPGGITIAEEIREVILDPKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H+ + P+L +G I+LCDRFLDSS AYQG + S+ Sbjct: 61 AMDERTEALLYAAARRQHLAEKVIPSLDKGSIVLCDRFLDSSLAYQGHARGIGMEEVYSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ + MPD T+ D+ +IGL+R+ + + RE LD + + HE+ R+ +L + Sbjct: 121 NKFAIGDTMPDITLYFDVEPEIGLERI-SAHKGREVNRLDL---ETIDFHERVREGYLML 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R +D++ SF V N L I+ + + +R Sbjct: 177 LEKFPERIKKIDASASFGEVYQNALKIIEKYIDER 211 >gi|116493219|ref|YP_804954.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745] gi|122265317|sp|Q03E60|KTHY_PEDPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116103369|gb|ABJ68512.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745] Length = 209 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 130/214 (60%), Gaps = 11/214 (5%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FISFEG +GAGKTT + ++++ + QR + VTREPGG P +EA R ++L E Sbjct: 2 NGHFISFEGPDGAGKTTVLQAMVEHYQQRLKDQLTVTREPGGNPISEAIRTIILDKNNTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL + ++ CDRF+DSS AYQG + + + D++ Sbjct: 62 MDERTEALLYAAARRQHLVETILPALKKNHVVFCDRFVDSSIAYQG---AGRKIGTDAVY 118 Query: 122 EISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++++ + +P+ TI LD+P ++GLKR+ + +D + + + H++ R +L Sbjct: 119 QMNLFATEGALPEKTIYLDVPSELGLKRIMT----HRTEDVDRLDLEQLDFHQRVRSAYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 D+A+ PDR ++D++ V +++ ++ +++ Sbjct: 175 DLAKKFPDRIVVIDASQELDDVKRDVIEVLDQIL 208 >gi|169825658|ref|YP_001695816.1| thymidylate kinase [Lysinibacillus sphaericus C3-41] gi|168990146|gb|ACA37686.1| Thymidylate kinase [Lysinibacillus sphaericus C3-41] Length = 215 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 80/216 (37%), Positives = 124/216 (57%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNS LFI+FEG EGAGKTT I + L KN DV TREPGG AE R ++L+ Sbjct: 7 MNSNLFITFEGPEGAGKTTVIQKIAERLAEKNIDVLATREPGGIEIAEKIRTIILNPAHT 66 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 EA+++AAAR H +RPAL GK+++CDRF+DSS AYQG ++ + +D Sbjct: 67 AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQG---YARGIGIDEV 123 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ E ++ + +PD TI+ D+ ++GL R+ + RE LD + + H+K + + Sbjct: 124 LSINEFAIGKKLPDMTILFDIAPEVGLARIYATGN-REVNRLDV---ESLPFHQKVHEGY 179 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 L + P+R +V++ SV + +++ + +Q Sbjct: 180 LLLVERYPERIRMVNADQDIDSVVEEVWSLLLKAIQ 215 >gi|311695098|gb|ADP97971.1| thymidylate kinase [marine bacterium HP15] Length = 213 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG GK+T ++ L D VTREPGGTP AEA R +LL+ + Sbjct: 5 GQFITFEGTEGVGKSTQLTNAADTLAGLGVDYIVTREPGGTPMAEAVRELLLAPRDEPVN 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR H+ I PAL +G+ +LCDRF D+++AYQG + L+ + Sbjct: 65 EITELLLMFAARAQHLHTRILPALEQGQWVLCDRFTDATFAYQGGGRGVPEERIALLETL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD I+LD PVD G+ R + R LD FE++D+ ++ R+ +L A Sbjct: 125 VQGDIRPDHVIVLDAPVDTGMARARKR------GDLDRFEQEDLEFFQRIRETYLARAMA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 QP R H++D+A V+ + ++ Sbjct: 179 QPSRYHVIDAARPLAEVSGQVSELL 203 >gi|168187948|ref|ZP_02622583.1| thymidylate kinase [Clostridium botulinum C str. Eklund] gi|169294219|gb|EDS76352.1| thymidylate kinase [Clostridium botulinum C str. Eklund] Length = 212 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 124/211 (58%), Gaps = 10/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+ EG EG+GKTT + +++ +L+ N D TREPGG +E R+V+L+ Sbjct: 1 MNKGIFITLEGPEGSGKTTIVKMIEEYLRENNIDYISTREPGGINISEQIRNVILNKDNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++ A+R H+ + PAL GK+++CDRF+DSS AYQG ++ + +D + Sbjct: 61 EMDPRTEALLYVASRRQHLAERVIPALKSGKVVICDRFVDSSLAYQG---YARGIGIDEV 117 Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 EI ++ MPD T+ LD+ +IGL R+ ++ S RE LD E+ D H+K R+ + Sbjct: 118 MEINEFAIDGYMPDLTLYLDIEPEIGLNRI-SKNSEREVNRLD-LEKLD--FHKKVREGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + P+R +++ S V T + N + Sbjct: 174 FKLLERYPNRIKQINANQSVDKVFTEVKNFL 204 >gi|254445325|ref|ZP_05058801.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235] gi|198259633|gb|EDY83941.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235] Length = 214 Score = 137 bits (345), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 82/210 (39%), Positives = 118/210 (56%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVD 60 +G F +FEG EG+GK+T I LL L ++V VTREPGGT E RH+L+ S G D Sbjct: 8 TGKFFTFEGSEGSGKSTQIELLAEELAGMGHEVVVTREPGGTSIGEEIRHLLIHSSAGKD 67 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EAE ++FAAAR V +I P L +G I+LCDRFLDS+ YQG S + + Sbjct: 68 -MTPEAELLLFAAARAQLVRELILPELEKGSIVLCDRFLDSTTVYQGAARSIASDPVSYI 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +V + P T ILD+P + ++RV+ R S D E+++ ++K R +L + Sbjct: 127 NQFAVGPLSPTLTFILDVPAEESIRRVKRRV----SDLPDRMEQENNDFYKKVRDGYLLL 182 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A++ P+R H+VD S IL V + Sbjct: 183 AKSMPERFHVVDGTRSLAVNREEILKTVLD 212 >gi|256397499|ref|YP_003119063.1| thymidylate kinase [Catenulispora acidiphila DSM 44928] gi|256363725|gb|ACU77222.1| thymidylate kinase [Catenulispora acidiphila DSM 44928] Length = 901 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 11/204 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61 +G F+SFEG +G+GK+T + LL +L+ ++V VTREPGGTP R+++L D Sbjct: 496 TGTFLSFEGGDGSGKSTQLDLLADWLRGSGHEVVVTREPGGTPLGTKLRNIVLDAHNADV 555 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R DHVE V+RPAL G +++ DR++DSS AYQG + ++ L Sbjct: 556 ISPRAEALIYAADRADHVERVVRPALERGAVVITDRYVDSSLAYQGAGRALSAREVELLS 615 Query: 122 EISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + Q +MPD TI++DL P++ +R D E + V H + R +L++ Sbjct: 616 QWATQGLMPDVTILMDLDPLEAARRR---------KTPADRLELESVDFHRRVRNRYLEL 666 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A +P+R ++++ + +A I Sbjct: 667 ATAEPERFIVINAMEPIEQIAGRI 690 >gi|326387758|ref|ZP_08209364.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370] gi|326207804|gb|EGD58615.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370] Length = 207 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++G FI+ EG EG GK+T + LL + LQ + V TREPGGTP AEA R ++L+ + Sbjct: 1 MSAGRFIALEGGEGVGKSTQLRLLAQALQADGHVVVTTREPGGTPGAEAIRAMVLANEGE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +G AEA++FAAAR DHV+ +IRPAL G+ +L DR+LDSS AYQG + +L Sbjct: 61 GWGPRAEALLFAAARADHVDRLIRPALERGEWVLTDRYLDSSRAYQGGGSGLSDDDILAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + ++PD TI+L L + R +LR+ D +D H + F Sbjct: 121 HRIGSEGLLPDRTILLTLDPE----ETARRLTLRDEGRADRIGGRDAAYHARVAAAFRRF 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +P R +VD++ + +SV IL+ V Sbjct: 177 AEAEPHRFTLVDASGTPESVHARILSAV 204 >gi|88810823|ref|ZP_01126080.1| thymidylate kinase [Nitrococcus mobilis Nb-231] gi|88792453|gb|EAR23563.1| thymidylate kinase [Nitrococcus mobilis Nb-231] Length = 222 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 120/211 (56%), Gaps = 6/211 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EGIEGAGKT+ + L + L+ + + +TREPGGT EA R +LL + Sbjct: 15 FITVEGIEGAGKTSCLDYLAKLLRNQAIEAVLTREPGGTSLGEAVRALLLDHRFRGMAGD 74 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR H+ VIRPAL G+ ++CDRF D++YAYQG + + L+ + Sbjct: 75 AETLLVFAARAQHLAEVIRPALAAGQWVVCDRFTDATYAYQGGGRALGATRVGLLEHWAQ 134 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 E+ PD T+ LD+PV +GL R+ +R + LD FE + E+ R ++L+ R +P Sbjct: 135 SELRPDRTLYLDVPVTVGLGRIASRGN------LDRFESERQAFFERVRCVYLERCRAEP 188 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R +++ S ++V T I + +L+ V Sbjct: 189 QRMRRIEADGSREAVHTQIAAALADLLNDGV 219 >gi|311112929|ref|YP_003984151.1| thymidylate kinase [Rothia dentocariosa ATCC 17931] gi|310944423|gb|ADP40717.1| thymidylate kinase [Rothia dentocariosa ATCC 17931] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 124/216 (57%), Gaps = 13/216 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI FEG +GAGKTT ++ L+ L+ + Y V TREPGGTP EA R ++L G E Sbjct: 34 GLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSEVD 93 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AEA++FAA+R H IRPAL G ++L DR+LDSS AYQG ++L D++ ++ Sbjct: 94 ARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQG---IGRNLGKDTITDL 150 Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S ++++P TI+LD+P+ +R+ +R +D E + + F DI Sbjct: 151 SRWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKARVHTAFADI 204 Query: 181 ARNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215 AR D H +VD S +V +L +V L++ R Sbjct: 205 ARQNADGAHYVVDGCGSVDAVHERVLEVVRPLLESR 240 >gi|81427954|ref|YP_394953.1| thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei 23K] gi|123564716|sp|Q38YT6|KTHY_LACSS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78609595|emb|CAI54641.1| Thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei 23K] Length = 214 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 13/212 (6%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKT+ + +++ R + + ++ VTREPGG P +E R ++L Sbjct: 3 GKLITFEGPDGAGKTSALEAVVARLQKEVSQEIVVTREPGGNPISEQIRQIILDVKNTAM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I+PAL K+++CDRF+DSS AYQG + + Sbjct: 63 DDRTEALLYAAARRQHIVEKIQPALAADKLVICDRFVDSSIAYQGAGRGIGEEAVAQMNL 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV----QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + PD T+ LD+P ++GL R+ QN+Y D +++ + H+K RQ +L Sbjct: 123 FATDGLTPDLTLYLDVPSEVGLARIKQHRQNQY--------DRLDQEKLAFHQKVRQSYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A+ PDR +D++ ++V T L ++ + Sbjct: 175 KLAQAHPDRIKTIDASQPLEAVVTQCLQVIAQ 206 >gi|220934998|ref|YP_002513897.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7] gi|219996308|gb|ACL72910.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7] Length = 218 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GK+T I L+ FL+ + + VTREPGGTP AE R +LLS Sbjct: 9 GRFITLEGAEGVGKSTQIQALQAFLESRGVPLLVTREPGGTPLAERIRELLLSRDHPPMH 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR +H+ I PAL G +LCDRF D++YAYQG + L++ Sbjct: 69 PDTELLLMFAARAEHLRTRILPALEAGTWVLCDRFTDATYAYQGGGRGLDPARIAVLEDW 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V PD T++LD+ V GL R + R D FE++ + E+ R+ +L AR Sbjct: 129 VQGPVRPDLTLLLDVDVRTGLARARGR------GEADRFEQEAMDFFERVREAYLARARA 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R I+D+ S ++V ++ + L+Q Sbjct: 183 EPSRYRIIDAGQSLEAVTRDLQAALVSLLQ 212 >gi|149914153|ref|ZP_01902684.1| thymidylate kinase [Roseobacter sp. AzwK-3b] gi|149811672|gb|EDM71505.1| thymidylate kinase [Roseobacter sp. AzwK-3b] Length = 208 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 81/206 (39%), Positives = 111/206 (53%), Gaps = 6/206 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G+GK+T LL L+ DV +TREPGG+P AE R ++L D + Sbjct: 4 GGYFISFEGIDGSGKSTQARLLADHLRGTGRDVVLTREPGGSPGAEEIRALVLEGDGDRW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++F AAR DH+E I PAL G+I++CDRF DS+ YQG + +D L Sbjct: 64 SPETELLLFTAARRDHLERTIAPALEAGQIVICDRFADSTRLYQGLARADLRGLVDQLHS 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI++D+ GL R R + E FE + +K RQ FLD+A+ Sbjct: 124 LMIGR-EPDLTILIDMDPATGLGRALARGTGEER-----FESFGDSMQQKIRQGFLDLAQ 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 R VD +VA +I I Sbjct: 178 EFSARFVTVDGNRQLDAVAADIRQIA 203 >gi|302864959|ref|YP_003833596.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] gi|302567818|gb|ADL44020.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] Length = 718 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 123/216 (56%), Gaps = 12/216 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++SGLF+ FEG EGAGK+T ++ L L+ + DV VTREPG TP E R ++L Sbjct: 475 VSSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGERIRSLVLGTTPG 534 Query: 61 EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + AEA+++AA R HV V+RPAL+ G +++ DR++DSS AYQG + + L +D Sbjct: 535 EAPSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQG---AGRTLPVDE 591 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +S + PD ++LD+ GL RV++R + D E + + HE+ R Sbjct: 592 VSWLSSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----AEGTDRLEAESLTFHERVRYA 646 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 FLD+A P R ++D++ A + V EL+ Sbjct: 647 FLDLAAGDPKRYLVLDASRPIDETADAVARRVGELL 682 >gi|301060374|ref|ZP_07201237.1| dTMP kinase [delta proteobacterium NaphS2] gi|300445570|gb|EFK09472.1| dTMP kinase [delta proteobacterium NaphS2] Length = 212 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 104/192 (54%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T + L+R +TREPGGTP R +LLS G + Sbjct: 1 MFITFEGIEGCGKSTQAKRIAARLERAGVSCILTREPGGTPVGNDIRQILLSSGNRDLPP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A R H+ +V++PAL K +LCDRF D++ AYQG L E++ Sbjct: 61 LAELFLYEADRALHMASVVKPALAAKKWVLCDRFFDATTAYQGYARGQDLHMTARLNEMA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T +LD PV +GLKR R + A D FE++ HE R + ++A+ Sbjct: 121 SFGIKPDKTFLLDCPVSVGLKRALKRNAESRVAGQDRFEQEKTAFHEAVRHGYRELAKQN 180 Query: 185 PDRCHIVDSAHS 196 P R +VD+ + Sbjct: 181 PHRFVVVDATQT 192 >gi|296329529|ref|ZP_06872015.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672726|ref|YP_003864397.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153272|gb|EFG94135.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410969|gb|ADM36087.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 212 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 124/215 (57%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILIAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 EA+++AAAR H+ ++PAL +G ++LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DPRTEALLYAAARRQHLVEKVKPALEQGHVVLCDRFIDSSLAYQG---YARGLGIDEVLS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E ++ ++MP T+ + + GLKR+ S RE LD + + H K R+ + + Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIHANGS-REKNRLDL---EKLSFHTKVREGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P R H VD++ S V ++L +V E ++K Sbjct: 175 LMKRFPKRFHPVDASQSKDLVVQDVLKVVNEALKK 209 >gi|260102441|ref|ZP_05752678.1| dTMP kinase [Lactobacillus helveticus DSM 20075] gi|260083761|gb|EEW67881.1| dTMP kinase [Lactobacillus helveticus DSM 20075] Length = 216 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 11/206 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F+SFEG +GAGK+T + +L + + VTREPGG+ AE R ++L D+ Sbjct: 7 GYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR HVE +IRPAL EGKI+ DRF+DSS AYQGE + L ++ +++ Sbjct: 67 DAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGE---GRDLGIEEVKQ 123 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ PD T LD+ +IGL R+Q +E D E++++ H+K FL Sbjct: 124 INDFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLK 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 + PDR +D+ + V ++ Sbjct: 180 VKDLYPDRFVTIDATQPIEDVVNQVI 205 >gi|253699689|ref|YP_003020878.1| thymidylate kinase [Geobacter sp. M21] gi|259494271|sp|C6E2H4|KTHY_GEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|251774539|gb|ACT17120.1| thymidylate kinase [Geobacter sp. M21] Length = 225 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 85/217 (39%), Positives = 121/217 (55%), Gaps = 4/217 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT + LLK L V VTREPGG P A+ R +LL Sbjct: 2 GFFITFEGIEGCGKTTQLRLLKERLVALGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV+ VI PAL G+ +LCDRF D++ AYQG ++ L + Sbjct: 62 PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLSVIEELNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V P T+++D PV++GL R R A + FER+ ++ H+K R +L +A Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRDGYLALAAA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 P+R +VD + Q T +L V E +++R+ L Sbjct: 182 FPERFVVVDGSGDVQQ--TGLL--VEEALRRRMQSLG 214 >gi|330465259|ref|YP_004403002.1| thymidylate kinase [Verrucosispora maris AB-18-032] gi|328808230|gb|AEB42402.1| thymidylate kinase [Verrucosispora maris AB-18-032] Length = 753 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 13/217 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +++GLF+ FEG EGAGK+T ++ L L+ + DV VTREPG T R ++L D Sbjct: 512 VSAGLFVVFEGGEGAGKSTQLAQLAERLRAEGRDVVVTREPGATGVGTRIRSLVLDNNTD 571 Query: 61 EFGA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AEA+++AA R HV V+RPAL G +++ DR++DSS AYQG + + L +D Sbjct: 572 DEAPSPRAEALLYAADRAHHVATVVRPALSRGAVVISDRYVDSSLAYQG---AGRTLPVD 628 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L +S + PD ++LD+ GL RV R S D E + + HE+ R Sbjct: 629 ELSWLSSWATGGLKPDLVVLLDIDPRAGLSRVAER-----SRAADRLEAESLAFHERVRY 683 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 FLD+A P R ++D+ H + +A + + V EL+ Sbjct: 684 AFLDLAAADPKRYLVLDAGHPVEQIAERVADRVTELL 720 >gi|161506952|ref|YP_001576906.1| thymidylate kinase [Lactobacillus helveticus DPC 4571] gi|172048179|sp|A8YTF9|KTHY_LACH4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|160347941|gb|ABX26615.1| Thymidylate kinase [Lactobacillus helveticus DPC 4571] gi|328462877|gb|EGF34726.1| thymidylate kinase [Lactobacillus helveticus MTCC 5463] Length = 212 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 120/206 (58%), Gaps = 11/206 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F+SFEG +GAGK+T + +L + + VTREPGG+ AE R ++L D+ Sbjct: 3 GYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR HVE +IRPAL EGKI+ DRF+DSS AYQGE + L ++ +++ Sbjct: 63 DAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGE---GRDLGIEEVKQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ PD T LD+ +IGL R+Q +E D E++++ H+K FL Sbjct: 120 INDFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLK 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 + PDR +D+ + V ++ Sbjct: 176 VKDLYPDRFVTIDATQPIEDVVNQVI 201 >gi|256848132|ref|ZP_05553576.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN] gi|256715192|gb|EEU30169.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN] Length = 212 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 125/219 (57%), Gaps = 16/219 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ IS ++ +L +K V +TREPGG +E R +L Sbjct: 3 GRFISFEGPDGAGKTSVISAIQEWLTQKYGKQAVLLTREPGGNRISEQIRQILFDDHNTN 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAAAR H+ I PAL GK +L DR++DSS AYQG +HL D + Sbjct: 63 MDARTEALLFAAARRQHIVEDIEPALQAGKFVLSDRYVDSSVAYQG---GGRHLGADDIW 119 Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ ++PD TI LD+P ++GL+R+ S ++ +R+ + H+ R +L Sbjct: 120 ELNQFAIHGLLPDLTIYLDIPSELGLERI----SKHRQNQVNRLDREKLRFHQDVRNAYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A+ R ++D++ +V +N+V E++Q R + Sbjct: 176 TLAQRHQKRIQLIDASQPLPTV----INMVQEMIQNRFN 210 >gi|308066851|ref|YP_003868456.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681] gi|305856130|gb|ADM67918.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681] Length = 215 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 124/216 (57%), Gaps = 9/216 (4%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G+FI+ EG +G+GKTT I L +F++ + Y V TREPGG +E R ++L Sbjct: 1 MNRKGIFITLEGGDGSGKTTMIQRLAKFMEEEGYPVITTREPGGIEISEKIRSIILDPAH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AAAR H+ ++PA+ +G I+LCDRF+DSS YQG + S Sbjct: 61 TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +V + PD T LD+ ++GL R+ + A +D + + + H K R+ +L+ Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARI----NASRGAEMDRLDMESISFHHKVREAYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +AR P+R IVD++ + + V ++ +L++KR Sbjct: 177 LARKFPERITIVDASPAPEQVE----QVLKDLLKKR 208 >gi|172056067|ref|YP_001812527.1| dTMP kinase [Exiguobacterium sibiricum 255-15] gi|229621736|sp|B1YGD3|KTHY_EXIS2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|171988588|gb|ACB59510.1| dTMP kinase [Exiguobacterium sibiricum 255-15] Length = 212 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGKTT + LL L + Y++ +TREPGGT R ++L+ E Sbjct: 2 TGTFITVEGPDGAGKTTQLQLLADRLTAEGYEIVMTREPGGTRIGNEIRSLILNPDFQEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++AA+R HV +IRPAL GKI+LCDRF+D+S AYQG + S+ + Sbjct: 62 DEMTEILLYAASRAQHVNELIRPALAAGKIVLCDRFIDASIAYQGYGLGYTIEQVRSINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T + DL V +R+ +R LD E++D ++ F+ +A Sbjct: 122 QATNHLTPDRTYLFDLTVSESKQRMMDR------GALDRIEQRDDAFRQRVYDGFMTLAV 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R +VD+ S +S+ T + V ++KR Sbjct: 176 QEPERIQLVDANQSIESLQTELCKDVLTYLKKR 208 >gi|15805151|ref|NP_293837.1| thymidylate kinase [Deinococcus radiodurans R1] gi|14285522|sp|Q9RY40|KTHY_DEIRA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|6457772|gb|AAF09698.1|AE001873_8 thymidylate kinase [Deinococcus radiodurans R1] Length = 206 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/218 (37%), Positives = 120/218 (55%), Gaps = 17/218 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG EGAGKTT ++ L+ L+ + V VTREPGGTP R V+L V Sbjct: 1 MSQGLFITLEGPEGAGKTTQLARLEARLRAAGHAVTVTREPGGTPLGTRVREVVLDPAV- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++++A+R V V+RPAL G+ +LCDR+ DSS AYQG + + L L L Sbjct: 60 EIEPLGEFLLYSASRAQLVREVLRPALERGETVLCDRYADSSLAYQG---AGRGLSLPLL 116 Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++I+ + + P T++LDL +GL+R R D E+ D+ H + RQ F Sbjct: 117 RQITAEVTGGLTPGLTVLLDLDPALGLQRAARR------GQPDRLEQADLTFHRRVRQGF 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 LD+A +P R ++D+ + I W V +R Sbjct: 171 LDLAHAEPQRFLVLDATRPEDELEAEI----WAAVSER 204 >gi|227894602|ref|ZP_04012407.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047] gi|227863593|gb|EEJ71014.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047] Length = 216 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F+SFEG +GAGK+T + +L + R VTREPGG+ AE R ++L D+ Sbjct: 7 GYFVSFEGPDGAGKSTVLKEVLAKISPRLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AA+R HVE VI+PAL GKI+ DRF+DSS AYQGE + + + Sbjct: 67 DAKTEALLYAASRSQHVEEVIKPALAAGKIVFSDRFVDSSLAYQGEGRGLGIKEVKQIND 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ PD T LD+ +IGLKR++ +E D E++++ H+K FL + Sbjct: 127 FATDKLDPDLTFFLDVAPEIGLKRIEKLRPDQE----DRLEQENIAFHKKVYAGFLKVRD 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 PDR +D+ + V +++++ Sbjct: 183 MYPDRFVTIDATQPIEKVVDQVISVL 208 >gi|321313698|ref|YP_004205985.1| thymidylate kinase [Bacillus subtilis BSn5] gi|320019972|gb|ADV94958.1| thymidylate kinase [Bacillus subtilis BSn5] Length = 212 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 126/215 (58%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 + EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E ++ ++MP T+ + + GLKR+ S RE LD E+ D H K ++ + + Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P+R H VD+ S V ++L ++ E ++K Sbjct: 175 LMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209 >gi|254448227|ref|ZP_05061689.1| thymidylate kinase [gamma proteobacterium HTCC5015] gi|198262094|gb|EDY86377.1| thymidylate kinase [gamma proteobacterium HTCC5015] Length = 213 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 118/215 (54%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GK+T++ ++++L + +V TREPGGTP EA R VLL + G Sbjct: 3 GRFITLEGGEGVGKSTNLRYVQQWLTGQGLNVVQTREPGGTPLGEALRGVLLGDQAEGIG 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+AE + AAR +H++ VI PAL G +LCDRF D+SYAYQG + +L+ Sbjct: 63 AKAELLTVFAARQEHLDKVIVPALERGDWVLCDRFTDASYAYQGGGRGLAFDTIAALENW 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T++LD P+++G+ R R D FER+ E + + A Sbjct: 123 VQGDLRPDLTLLLDAPLEVGMARAAER------GQADRFEREPRAFFEAVSEAYRRRAST 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 + +R ++D+A SV I + + +R++P Sbjct: 177 EAERYAVIDAAQDLASVQAQIDRV----LSERLAP 207 >gi|320095385|ref|ZP_08027065.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977690|gb|EFW09353.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338] Length = 256 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 122/210 (58%), Gaps = 15/210 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG++GAGKTT I ++ + + + ++V +T EPGGTP R L+ G D+ Sbjct: 13 GVFITFEGVDGAGKTTQIRNVREWFEERGFEVVMTCEPGGTPLGAELRR-LVQNGPDDID 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AA R HV V+RPAL G ++L DR++DSS AYQG +++ L +D + + Sbjct: 72 PRTEALLYAADRAYHVATVVRPALARGAVVLGDRYIDSSLAYQG---AARSLGVDEIAAM 128 Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S + + P T +LDLP ++G R + D ER+ HE+ R+ +L + Sbjct: 129 SAWATEGLSPRTTFLLDLPPEVGAGRRTD--------APDRMERESADFHERVRREYLRL 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A +PDR ++D+ + + V + I ++ E Sbjct: 181 ADAEPDRIVVIDAVGTREEVFSEIRGVLVE 210 >gi|269836979|ref|YP_003319207.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745] gi|269786242|gb|ACZ38385.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745] Length = 212 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 91/219 (41%), Positives = 126/219 (57%), Gaps = 9/219 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG EGAGK+T I L L+ + Y V TREPGGT EA R +LL+ Sbjct: 3 LFVTFEGPEGAGKSTQIRRLASELEARGYSVVATREPGGTAIGEAIRQILLAPEHSAMLP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E EA++ AAR HV VI+PAL GKI+LCDRF+DS+ YQG L +LQ + Sbjct: 63 ETEALLNTAARAQHVAEVIQPALAAGKIVLCDRFVDSTLVYQGAGRGLPTSDLLALQRFA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD T++LDLPV++G R R S L F+ + HE+ R FL +AR+ Sbjct: 123 TRGLWPDLTLLLDLPVEVGQAR--RRAS---GEPLSRFDADALGFHERVRTGFLALARDD 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 P R I+D+A S ++VA +L +V E R+ P ++ Sbjct: 178 PARWRIIDAAQSEEAVAREVLAVVLE----RLPPAPGRQ 212 >gi|291482399|dbj|BAI83474.1| thymidylate kinase [Bacillus subtilis subsp. natto BEST195] Length = 212 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 126/215 (58%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 + EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E ++ ++MP T+ + + GLKR+ S RE LD E+ D H K ++ + + Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P+R H VD+ S V ++L ++ E ++K Sbjct: 175 LMKRFPERFHSVDAGQSKGLVVQDVLKVIDEALKK 209 >gi|239618400|ref|YP_002941722.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1] gi|259494274|sp|C5CHP2|KTHY_KOSOT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|239507231|gb|ACR80718.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1] Length = 208 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 116/204 (56%), Gaps = 11/204 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEGI+G+GK+T ++L + +L+R + + REPGGT A E R +LL F Sbjct: 1 MFISFEGIDGSGKSTQVALFREYLERNSMEYVFIREPGGTQAGEDIREILLHNEYKLF-P 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++F A+R V VI PAL + K++L DRFLDSS AYQG + +L E S Sbjct: 60 ETELLLFMASRAQIVREVIIPALKKKKLVLADRFLDSSVAYQGYGRGLSIQMVTTLNEFS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V P T+ +D+PVD+ +KR++ ++ E LD+F+R RQ +L++A+ Sbjct: 120 TGGVTPHLTLFIDVPVDVAVKRMRREMKHDKIEMESLDFFKRV--------RQGYLELAK 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206 P R ++D S + + ++ Sbjct: 172 RDPKRILVIDGTMSVEKIHEQVVK 195 >gi|149376737|ref|ZP_01894495.1| thymidylate kinase [Marinobacter algicola DG893] gi|149358976|gb|EDM47442.1| thymidylate kinase [Marinobacter algicola DG893] Length = 210 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG GK+T ++ L + VTREPGGTP AE+ R +LL+ + Sbjct: 5 GQFITFEGTEGVGKSTQLANAASTLDALGVECVVTREPGGTPMAESIRELLLAPRDEPVN 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR H+ I P L G+ +LCDRF D+++AYQG + L+ + Sbjct: 65 ETTELLLMFAARAQHLHTRILPELEAGRWVLCDRFTDATFAYQGGGRGVPTERIALLENL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V PD ++LD PV+ G+ R ++R LD FE++ V E+ R+ +L A N Sbjct: 125 VQGTVRPDHVVLLDAPVETGMTRARHRGE------LDRFEQEAVAFFERIRETYLARAAN 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R HIVD++ ++V+ + ++ LV + Sbjct: 179 APGRYHIVDASQPIETVSAEVSGLLRNLVNR 209 >gi|283853941|ref|ZP_06371146.1| thymidylate kinase [Desulfovibrio sp. FW1012B] gi|283570672|gb|EFC18727.1| thymidylate kinase [Desulfovibrio sp. FW1012B] Length = 211 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEG+GK+T I LL L+R V VTREPGG + R +LLS + Sbjct: 1 MFITLEGIEGSGKSTQIGLLTTALERTGRTVRVTREPGGCGLGQTLRAILLSLETRNLDS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A R HV VIRPAL G+++LCDRF DS+ AYQG S L L +++ Sbjct: 61 RAELFLYLADRAQHVAEVIRPALAAGQVVLCDRFADSTIAYQGYGRSLDVALLQQLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V P T++LD+ + GL+R R +A FE + + H + R + +A Sbjct: 121 VAGTWPQLTLLLDIDPEQGLRRALARNLQAGTTAAEGRFEAEHLDFHGRVRDGYRTLASL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P R VD+ +VA VW++V +R+ Sbjct: 181 HPRRFVTVDATPDAATVAAR----VWDVVSQRLG 210 >gi|163814924|ref|ZP_02206312.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759] gi|158449863|gb|EDP26858.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759] Length = 207 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 125/217 (57%), Gaps = 16/217 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EG +GAGKTT LLK +L++K YDV +TR+PGG P +EA R V+L+ E G Sbjct: 3 GIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKEFTEMG 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120 E +++A+AR V+ I+PAL G+ ++ DRF+DSS YQG + L +D+ + Sbjct: 63 YMTELLLYASARAQLVKENIKPALEAGQAVIADRFVDSSAVYQG---IGRGLGVDTVYKI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++Q +MPD T ++DL G+ R +N+ A LD E + + H+K + + Sbjct: 120 NEFALQGIMPDMTFLMDLNAQEGIARKKNQ------AELDRMENEKIEFHQKVVDGYRML 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A P+R +D+ I I+ + V+K+++ Sbjct: 174 ADMHPERIVKIDATLPINE----IHGIITKYVEKKLN 206 >gi|126726755|ref|ZP_01742595.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150] gi|126704084|gb|EBA03177.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150] Length = 209 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 112/204 (54%), Gaps = 10/204 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEGI+G+GK+T L L +DV TREPGG+ AE R +L+ D + AE Sbjct: 12 FITFEGIDGSGKSTQAKRLVAHLTSLGHDVIHTREPGGSAGAEEIRRLLVEGDPDRWSAE 71 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QEI 123 E ++F AAR DH+E I PAL GK ++ DRF DS+ YQG +D+L Q I Sbjct: 72 TEILLFTAARRDHLEKTIIPALAAGKWVVSDRFADSTRVYQGATRGDLRGIVDALHAQMI 131 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V+ PD T I+D+ L R L + D FE + E+ RQ FLD+A++ Sbjct: 132 GVE---PDMTFIIDMDPVAALSR-----GLARKSGEDRFEDFGLDFQERLRQGFLDLAKD 183 Query: 184 QPDRCHIVDSAHSFQSVATNILNI 207 PDRC ++D + +V+ +I + Sbjct: 184 YPDRCRLIDGSRGIDAVSADITAV 207 >gi|331270648|ref|YP_004397140.1| thymidylate kinase [Clostridium botulinum BKT015925] gi|329127198|gb|AEB77143.1| thymidylate kinase [Clostridium botulinum BKT015925] Length = 210 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 10/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+ EG +G+GKTT + +++++L+ N D TREPGG +E R ++L Sbjct: 1 MNKGVFITLEGPDGSGKTTIVKMIEKYLKENNVDYISTREPGGINISEQIREIILDTKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 E A EA+++ A+R H+ + PAL GKI++CDRF+DSS AYQG ++ + +D Sbjct: 61 EMDARTEALLYVASRRQHLAERVIPALKLGKIVICDRFIDSSLAYQG---YARGIGIDEV 117 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ E ++ MP+ T+ LD+ +IGLKR+ + RE LD E+ D H+K R+ + Sbjct: 118 MSINEFAIDGYMPNLTLYLDIEPEIGLKRISQNHK-REVNRLD-LEKLD--FHKKVREGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R +++ V ++ N + +V Sbjct: 174 FKVLEKYPNRIKKINANQPIDKVFEDVKNYLKFMV 208 >gi|261380492|ref|ZP_05985065.1| dTMP kinase [Neisseria subflava NJ9703] gi|284796744|gb|EFC52091.1| dTMP kinase [Neisseria subflava NJ9703] Length = 208 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 117/199 (58%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QVGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 64 TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE+++ + R+++L A QP Sbjct: 124 GDFRPDLTLLLDVPLEVSMARINQ---TREK---DRFEQEEAEFFNRVREVYLQRANEQP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++DS+ S +V I Sbjct: 178 ERYAVIDSSQSLDAVKNQI 196 >gi|150015005|ref|YP_001307259.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052] gi|189028831|sp|A6LPM3|KTHY_CLOB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|149901470|gb|ABR32303.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052] Length = 213 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 123/211 (58%), Gaps = 10/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI FEG EG GKTT I + ++ N++ TREPGG +E R V+LS Sbjct: 1 MKKGLFIVFEGGEGTGKTTAIDAIYDWITENNFECIKTREPGGIKISEQIRQVILSKDNK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 E A+ EA+++AAAR H+ + PAL +G I+LCDRF+DSS AYQG +++L ++ Sbjct: 61 EMDAKTEALLYAAARRQHLVEKVIPALNQGVIVLCDRFIDSSLAYQG---YARNLGIEEV 117 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ + ++ E MPD +++ DL IGL R+ N RE LD + + HE+ R+ + Sbjct: 118 LSINKFAIGEYMPDISVLFDLDPKIGLARIANN-DCREVNRLDI---EKLEFHERVREGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +N R +D+ ++ ++V I NI+ Sbjct: 174 DIVYKNNNHRIVKIDANNTKENVINQIKNIL 204 >gi|255320788|ref|ZP_05361963.1| thymidylate kinase [Acinetobacter radioresistens SK82] gi|255302165|gb|EET81407.1| thymidylate kinase [Acinetobacter radioresistens SK82] Length = 202 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 114/209 (54%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++K ++ +TREPGGTP AE R +LLS DE Sbjct: 1 MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTPLAEQIRALLLSVSHDEKMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GK +LCDRF D+S+AYQ L L + Sbjct: 61 DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLAVLNQS 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T+ LD PV++G+ R RE LD FE++ V EK R + + + Sbjct: 121 FVSR-MPDITLWLDAPVELGMSRA------RERGALDRFEQEKVSFFEKVRAGYTRLWQQ 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +D+ + + V L + +L Sbjct: 174 HPERIKRLDATQAPEKVLEQALEQIGKLA 202 >gi|239825610|ref|YP_002948234.1| thymidylate kinase [Geobacillus sp. WCH70] gi|259494272|sp|C5D352|KTHY_GEOSW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|239805903|gb|ACS22968.1| thymidylate kinase [Geobacillus sp. WCH70] Length = 210 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 10/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F SFEG +GAGKTT I+ L+ FL+ K +DV +TREPGG AE R ++L+ E Sbjct: 3 GRFFSFEGPDGAGKTTMITKLESFLREKGFDVLLTREPGGVRIAEEIRSIILNPKHTEMD 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AAAR H+ I PA+ GKI+LCDRF+DSS AYQG ++ L +D + +I Sbjct: 63 GRTEALLYAAARRQHLLEKIIPAIKAGKIVLCDRFVDSSLAYQG---FARGLGIDEILQI 119 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ P TI D+ IGL+R+Q RE LD + + H K R+ +L I Sbjct: 120 NQFAIDGFFPSLTIYFDIDPKIGLERIQKNKQ-REINRLDM---ESLSFHYKVREGYLKI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A DR ++D++ V + V + ++ R Sbjct: 176 AERFSDRIIVIDASKPVDEVFAMTIAAVMDQIEGR 210 >gi|326795549|ref|YP_004313369.1| Thymidylate kinase [Marinomonas mediterranea MMB-1] gi|326546313|gb|ADZ91533.1| Thymidylate kinase [Marinomonas mediterranea MMB-1] Length = 208 Score = 135 bits (340), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG+GK+T I+ L+++++ + +TREPGGTP AE R V+LS + Sbjct: 3 GKFITLEGGEGSGKSTAIACLEQWMKAQGIPYLLTREPGGTPLAEEIRQVVLSKRDETVN 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR HV I PAL G ++ DRF+DSSY YQG +DSL + Sbjct: 63 SITELLLVFAARAQHVAQKIAPALESGVWVISDRFIDSSYVYQGVARGLDIEDIDSLVRL 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V +PD TI+LD+PV +G+ RV R D + + HE R FLD+A+ Sbjct: 123 AVGASLPDKTILLDVPVSVGMARVSARTG------NDRLDGESTQFHEMVRAGFLDLAKR 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R IVD++ ++V I+ I+ ++ Q + Sbjct: 177 DSHRISIVDASVPQENVFEQIVTILEQVKQAK 208 >gi|159039919|ref|YP_001539172.1| dTMP kinase [Salinispora arenicola CNS-205] gi|157918754|gb|ABW00182.1| dTMP kinase [Salinispora arenicola CNS-205] Length = 703 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 81/216 (37%), Positives = 121/216 (56%), Gaps = 12/216 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59 +++GLF+ FEG EGAGK+T ++LL L+ + DV VTREPG T E R +LL G Sbjct: 445 VSAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGIGERIRSLLLGQPGS 504 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA+++AA R HV V+RPAL G +++ DR++DSS AYQG + + L +D Sbjct: 505 EVPSPRAEALLYAADRAHHVATVVRPALARGAVVVSDRYIDSSLAYQG---AGRTLPVDE 561 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +S + PD ++LD+ GL RV R S D+ E + V HE+ R Sbjct: 562 VSWLSSWATGGLKPDLVVLLDIDPHTGLSRVAVR-----SGATDHLEAESVSFHERVRYA 616 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 FLD+A P ++D+A +A + + EL+ Sbjct: 617 FLDLAATDPKHYLVLDAARPADEIADEVARRITELL 652 >gi|331703062|ref|YP_004399749.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801617|emb|CBW53770.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 213 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 125/216 (57%), Gaps = 7/216 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K+ L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKKELERLNYQVLITREPGGEAIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG S++++ +D + E+ Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQG---SARNIGVDVVSEVQ 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+ +C L L D+ + R +R + + +++ +K Q +L++ +N Sbjct: 118 -QIVLKNCLPDLTLFFDVSFSEAEKRMQIRGESSKNRLDKEKSDFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217 P R ++D+ V + I+ E + +KR S Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKENEKRTS 212 >gi|315501244|ref|YP_004080131.1| thymidylate kinase [Micromonospora sp. L5] gi|315407863|gb|ADU05980.1| thymidylate kinase [Micromonospora sp. L5] Length = 717 Score = 135 bits (340), Expect = 5e-30, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 12/216 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++SGLF+ FEG EGAGK+T ++ L L+ + DV VTREPG TP + R ++L Sbjct: 474 VSSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGKRIRSLVLGTNPG 533 Query: 61 EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + AEA+++AA R HV V+RPAL+ G +++ DR++DSS AYQG + + L +D Sbjct: 534 EAPSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQG---AGRTLPVDE 590 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +S + PD ++LD+ GL RV++R + D E + + HE+ R Sbjct: 591 VSWLSSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----NEGTDRLEAESLTFHERVRYA 645 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 FLD+A P R ++D++ A + V EL+ Sbjct: 646 FLDLAAGDPKRYLVLDASRPIDETADAVARRVGELL 681 >gi|270291181|ref|ZP_06197404.1| thymidylate kinase [Pediococcus acidilactici 7_4] gi|270280577|gb|EFA26412.1| thymidylate kinase [Pediococcus acidilactici 7_4] Length = 210 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 125/214 (58%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FISFEG +GAGKTT + ++++ + R + VTREPGG P +EA R ++L Sbjct: 1 MVNGHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E A EA+++AAAR H+ I PAL G+++ CDR++DSS AYQG + Sbjct: 61 TEMDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQ 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + +P+ TI LD+ ++GLKR+ + +D + + + HE+ R +L Sbjct: 121 MNLFATEGCLPEKTIYLDVSAEVGLKRIMT----HRTDDVDRLDLEQLDFHERVRDAYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ P+R ++D++ S V ++N++ ++++ Sbjct: 177 LAKRYPERIVVIDASQSIGDVKKAVINVLDQILK 210 >gi|217976730|ref|YP_002360877.1| dTMP kinase [Methylocella silvestris BL2] gi|217502106|gb|ACK49515.1| dTMP kinase [Methylocella silvestris BL2] Length = 233 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 89/213 (41%), Positives = 125/213 (58%), Gaps = 6/213 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG EG GK+T I L + L+ + + TREPGG+ AE R VLLS V G Sbjct: 15 GRLITLEGGEGVGKSTQIGRLLQRLRDEGIEAVATREPGGSEGAEILRRVLLSGVVKPLG 74 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEAI+FAAAR+DH++ +I PAL G ++ DRF DS+ AYQG S + +++L+ Sbjct: 75 PAAEAILFAAARIDHIDALIEPALAAGIWVVSDRFADSTRAYQGGAGSLDNRLINALERT 134 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ ++ PD T+ILDLP GL+R R ++ +D FE +D+ HE R FL IA + Sbjct: 135 ALGDLQPDLTLILDLPPGEGLRRAAARRK--DADGVDRFEGEDLRFHEAIRAAFLTIAAD 192 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 P RC +VD++ S VA I W V R+ Sbjct: 193 NPQRCVVVDASASEVEVAAAI----WTAVSDRL 221 >gi|257879313|ref|ZP_05658966.1| thymidylate kinase [Enterococcus faecium 1,230,933] gi|257881871|ref|ZP_05661524.1| thymidylate kinase [Enterococcus faecium 1,231,502] gi|257885061|ref|ZP_05664714.1| thymidylate kinase [Enterococcus faecium 1,231,501] gi|257890139|ref|ZP_05669792.1| thymidylate kinase [Enterococcus faecium 1,231,410] gi|257893467|ref|ZP_05673120.1| thymidylate kinase [Enterococcus faecium 1,231,408] gi|258615719|ref|ZP_05713489.1| thymidylate kinase [Enterococcus faecium DO] gi|260558755|ref|ZP_05830944.1| thymidylate kinase [Enterococcus faecium C68] gi|261207350|ref|ZP_05922037.1| thymidylate kinase [Enterococcus faecium TC 6] gi|289566857|ref|ZP_06447266.1| thymidylate kinase [Enterococcus faecium D344SRF] gi|293559585|ref|ZP_06676119.1| thymidylate kinase [Enterococcus faecium E1162] gi|293567580|ref|ZP_06678924.1| thymidylate kinase [Enterococcus faecium E1071] gi|294615743|ref|ZP_06695593.1| thymidylate kinase [Enterococcus faecium E1636] gi|294617668|ref|ZP_06697295.1| thymidylate kinase [Enterococcus faecium E1679] gi|294621756|ref|ZP_06700916.1| thymidylate kinase [Enterococcus faecium U0317] gi|257813541|gb|EEV42299.1| thymidylate kinase [Enterococcus faecium 1,230,933] gi|257817529|gb|EEV44857.1| thymidylate kinase [Enterococcus faecium 1,231,502] gi|257820913|gb|EEV48047.1| thymidylate kinase [Enterococcus faecium 1,231,501] gi|257826499|gb|EEV53125.1| thymidylate kinase [Enterococcus faecium 1,231,410] gi|257829846|gb|EEV56453.1| thymidylate kinase [Enterococcus faecium 1,231,408] gi|260075214|gb|EEW63527.1| thymidylate kinase [Enterococcus faecium C68] gi|260078410|gb|EEW66114.1| thymidylate kinase [Enterococcus faecium TC 6] gi|289161345|gb|EFD09236.1| thymidylate kinase [Enterococcus faecium D344SRF] gi|291589681|gb|EFF21485.1| thymidylate kinase [Enterococcus faecium E1071] gi|291591394|gb|EFF23053.1| thymidylate kinase [Enterococcus faecium E1636] gi|291596075|gb|EFF27341.1| thymidylate kinase [Enterococcus faecium E1679] gi|291598643|gb|EFF29700.1| thymidylate kinase [Enterococcus faecium U0317] gi|291606461|gb|EFF35861.1| thymidylate kinase [Enterococcus faecium E1162] Length = 214 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 2 NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 62 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ LD+ D GL+R+ +NR + +D + + + H++ R +L + Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A P+R H VD+ SF+ V + + E Sbjct: 177 AEENPERIHKVDARKSFEEVLQTSYHTIIE 206 >gi|58336718|ref|YP_193303.1| thymidylate kinase [Lactobacillus acidophilus NCFM] gi|73920822|sp|Q5FM02|KTHY_LACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58254035|gb|AAV42272.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus NCFM] Length = 216 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 8/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + +L + VTREPGG+ AE R ++L D+ Sbjct: 2 KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + EA+++AAAR HVE +I+PA+ EGK++ DRF+DSS AYQG+ + + Sbjct: 62 MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGL R++ +E D E++D+ H+K + FL + Sbjct: 122 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + PDR ++++ V + +V EL Q+ Sbjct: 178 KMYPDRFVVINATQPIDQV---VKQVVTELKQR 207 >gi|138893702|ref|YP_001124155.1| thymidylate kinase [Geobacillus thermodenitrificans NG80-2] gi|196250745|ref|ZP_03149432.1| dTMP kinase [Geobacillus sp. G11MC16] gi|166221745|sp|A4IJA6|KTHY_GEOTN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|134265215|gb|ABO65410.1| Thymidylate kinase [Geobacillus thermodenitrificans NG80-2] gi|196209695|gb|EDY04467.1| dTMP kinase [Geobacillus sp. G11MC16] Length = 225 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 80/207 (38%), Positives = 118/207 (57%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F SFEG EGAGKTT I L+ FL+ + +DV VTREPGG AEA R ++L+ E Sbjct: 2 NGYFFSFEGPEGAGKTTMIGKLESFLRERGFDVMVTREPGGVRIAEAIRALILNREYTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G+++LCDRF+DSS AYQG + + E Sbjct: 62 DGRTEALLYAAARRQHLLEKIVPALEAGRVVLCDRFVDSSLAYQGFARGLGVEEVWKINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ MP T+ D+ IGL+R+ QNR RE LD + + H+K R+ + +A Sbjct: 122 FAIDGYMPSLTVYFDIDPQIGLERIRQNRE--REVNRLDL---ETLSFHDKVREGYRKLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R ++D++ V + + V Sbjct: 177 KRFAERIVVIDASRPLDDVFSETVATV 203 >gi|33592905|ref|NP_880549.1| thymidylate kinase [Bordetella pertussis Tohama I] gi|33596203|ref|NP_883846.1| thymidylate kinase [Bordetella parapertussis 12822] gi|33601614|ref|NP_889174.1| thymidylate kinase [Bordetella bronchiseptica RB50] gi|46576478|sp|Q7VXD2|KTHY_BORPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576488|sp|Q7WA31|KTHY_BORPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576494|sp|Q7WJ63|KTHY_BORBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33572553|emb|CAE42133.1| thymidylate kinase [Bordetella pertussis Tohama I] gi|33573206|emb|CAE36861.1| thymidylate kinase [Bordetella parapertussis] gi|33576051|emb|CAE33130.1| thymidylate kinase [Bordetella bronchiseptica RB50] Length = 208 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 9/211 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+TH + + + L+ V TREPGGTP E R +LLS + Sbjct: 5 GRFITLEGVDGAGKSTHTAWMVQALRDLGLTVLATREPGGTPVGEKLRELLLS---EPMA 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++ AAR +HV VI PAL G+ ++CDRF D+SYAYQG + +L++ Sbjct: 62 LETETLLMFAARCEHVREVIAPALARGEWVVCDRFTDASYAYQGGGRQLGAARVAALEQW 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T + D+P+D+ R L S LD FER++ E+ R + + AR+ Sbjct: 122 VHPDLQPDRTWLFDVPLDVA------RARLARSRQLDRFEREEDAFFERTRAAYHERARS 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R I+DS+ + V + + V ELV + Sbjct: 176 SDGRIRIIDSSRPLEVVRAQLDSEVRELVAQ 206 >gi|257094047|ref|YP_003167688.1| thymidylate kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046571|gb|ACV35759.1| dTMP kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 211 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 117/205 (57%), Gaps = 8/205 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK++HI+ + FL+R+ V TREPGGTP EA R +LL + Sbjct: 10 GKFITFEGIDGAGKSSHIAGVAAFLRRRGLQVLTTREPGGTPLGEALRELLLH---EAMH 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E EA++ AAR +H+ VI PAL G ++CDRF D++YAYQ + L+E Sbjct: 67 LETEALLMFAARREHLARVIEPALERGDWVVCDRFSDATYAYQSGGRGLERKKFAQLEEW 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T++ DL I R+ + ++ LD FE++ HE+ R+ +L+ A Sbjct: 127 VHSHLQPDLTLLFDLSSSIASGRI-----VAQARELDRFEQERSDFHERVRRAYLERAIA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P R I+D+ + +++ I +I+ Sbjct: 182 APQRIQIIDAEQAPEAIKKMIEDII 206 >gi|85706301|ref|ZP_01037395.1| thymidylate kinase [Roseovarius sp. 217] gi|85669074|gb|EAQ23941.1| thymidylate kinase [Roseovarius sp. 217] Length = 208 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 112/207 (54%), Gaps = 6/207 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF+SFEGI+G+GK+T L L+ DV +TREPGG+P AE R ++L D Sbjct: 3 GQGLFLSFEGIDGSGKSTQARRLAEALRGVGRDVVLTREPGGSPGAEEIRRLVLEGDKDR 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E VI PAL G +++CDRF DS+ YQG S +D L Sbjct: 63 WSAETEILLFTAARRDHLERVIAPALDRGAVVICDRFADSTRMYQGLGRSDLRGLVDQLH 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+++D+ +GL R +R FE + + R FL +A Sbjct: 123 GLMIGR-EPDLTVLIDIDPGVGLGRALSR-----GGAEARFESFGEGMQARMRAGFLALA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + R ++D A +VA ++ +V Sbjct: 177 QEFAPRFAVIDGAGDLDAVAEDVARVV 203 >gi|325962187|ref|YP_004240093.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3] gi|323468274|gb|ADX71959.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3] Length = 231 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG +GAGK+T +LL L+ + V TREPGGTP E R ++L G Sbjct: 6 SGLFIAFEGGDGAGKSTQAALLAETLEARGLAVLRTREPGGTPIGEKLRSLVLDHGHGLI 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++FAA+R H VIRPAL G+++L DR++DSS AYQG + + SL E Sbjct: 66 DAHTEALIFAASRAAHASQVIRPALERGEVVLTDRYIDSSVAYQGAGRALGEDAVRSLNE 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T++LD+ +G R A D E + H + R FLD+AR Sbjct: 126 WATSGLQPHLTVLLDVDPAVGRSRRTA-----GDAAEDRMESEADEFHARIRDAFLDLAR 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+ ++ + H +++ IL V L+ Sbjct: 181 RRPESYLVLPAHHPVSELSSRILARVDALL 210 >gi|323465901|gb|ADX69588.1| Thymidylate kinase [Lactobacillus helveticus H10] Length = 216 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 120/206 (58%), Gaps = 11/206 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F+SFEG +GAGK+T + +L + + VTREPGG+ AE R ++L D+ Sbjct: 7 GYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDKM 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR HVE +IRPAL +GKI+ DRF+DSS AYQGE + L ++ +++ Sbjct: 67 DAKTEALLYAAARSQHVEEIIRPALSDGKIVFSDRFVDSSLAYQGE---GRDLGIEEVKQ 123 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ PD T LD+ +IGL R+Q +E D E++++ H+K FL Sbjct: 124 INDFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLK 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 + PDR +D+ + V ++ Sbjct: 180 VKDLYPDRFVTIDATQPIEDVVNQVI 205 >gi|227903280|ref|ZP_04021085.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796] gi|227868909|gb|EEJ76330.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796] Length = 220 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 8/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + +L + VTREPGG+ AE R ++L D+ Sbjct: 6 KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + EA+++AAAR HVE +I+PA+ EGK++ DRF+DSS AYQG+ + + Sbjct: 66 MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGL R++ +E D E++D+ H+K + FL + Sbjct: 126 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + PDR ++++ V + +V EL Q+ Sbjct: 182 KMYPDRFVVINATQPIDQV---VKQVVTELKQR 211 >gi|221307837|ref|ZP_03589684.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221312159|ref|ZP_03593964.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317092|ref|ZP_03598386.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. JH642] gi|221321355|ref|ZP_03602649.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767017|ref|NP_387909.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|239938655|sp|P37537|KTHY_BACSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225184644|emb|CAB11804.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 212 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 83/215 (38%), Positives = 126/215 (58%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 + EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E ++ ++MP T+ + + GLKR+ S RE LD E+ D H K ++ + + Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P+R H VD+ S V ++L ++ E ++K Sbjct: 175 LMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209 >gi|254475335|ref|ZP_05088721.1| thymidylate kinase [Ruegeria sp. R11] gi|214029578|gb|EEB70413.1| thymidylate kinase [Ruegeria sp. R11] Length = 227 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 6/206 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++FEGI+G+GK+T +L L+ + DV +TREPGG+ AE R ++L D + Sbjct: 15 GGLFVTFEGIDGSGKSTQCRMLADTLRARGLDVVLTREPGGSDGAEEIRRLVLEGDPDRW 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL G++++CDRF DS+ YQG +D L Sbjct: 75 SAETELLLFTAARRDHLERRILPALAAGQVVVCDRFADSTRMYQGLSRGDLRASVDQLHR 134 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI++D+ GL R + R E FE + + ++ R FL +A+ Sbjct: 135 LMIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAQ 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 +R ++D VA ++L+IV Sbjct: 189 EFANRFRVIDGDRPMDVVAQDVLDIV 214 >gi|261338416|ref|ZP_05966300.1| dTMP kinase [Bifidobacterium gallicum DSM 20093] gi|270276387|gb|EFA22241.1| dTMP kinase [Bifidobacterium gallicum DSM 20093] Length = 200 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 120/208 (57%), Gaps = 22/208 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----SCGV 59 +FI+FEGI+GAGKTT + LL + LQ V VTREPGGT + R +LL + Sbjct: 1 MFITFEGIDGAGKTTQVKLLAQALQEAGRSVEVTREPGGTALGASLRRLLLEGVADGSAI 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 DE AEA++FAA R HV VIRPA+ G ++CDR++DSS AYQG + + D Sbjct: 61 DE---HAEALMFAADRAQHVAQVIRPAMQRGDDVICDRYIDSSVAYQG---GGRDIGADQ 114 Query: 120 LQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ +S+ ++PD TI+LDL + R+ NR + R + D F R+ R+ Sbjct: 115 IRALSMWATGGLVPDLTIVLDLDPALSAARL-NRPADRMESAGDEFARRT-------REA 166 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204 FL +A +P+R ++D++ + +A ++ Sbjct: 167 FLAMAAAEPERFRVIDASLPVERIAADV 194 >gi|22537716|ref|NP_688567.1| thymidylate kinase [Streptococcus agalactiae 2603V/R] gi|25011666|ref|NP_736061.1| thymidylate kinase [Streptococcus agalactiae NEM316] gi|76787087|ref|YP_330195.1| thymidylate kinase [Streptococcus agalactiae A909] gi|76799459|ref|ZP_00781603.1| thymidylate kinase [Streptococcus agalactiae 18RS21] gi|77408332|ref|ZP_00785074.1| thymidylate kinase [Streptococcus agalactiae COH1] gi|46576569|sp|Q8DYB3|KTHY_STRA5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576575|sp|Q8E3X8|KTHY_STRA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123601435|sp|Q3JZV8|KTHY_STRA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|22534605|gb|AAN00440.1|AE014263_19 thymidylate kinase [Streptococcus agalactiae 2603V/R] gi|24413206|emb|CAD47285.1| unknown [Streptococcus agalactiae NEM316] gi|76562144|gb|ABA44728.1| thymidylate kinase [Streptococcus agalactiae A909] gi|76585186|gb|EAO61800.1| thymidylate kinase [Streptococcus agalactiae 18RS21] gi|77173095|gb|EAO76222.1| thymidylate kinase [Streptococcus agalactiae COH1] gi|319745548|gb|EFV97850.1| thymidylate kinase [Streptococcus agalactiae ATCC 13813] Length = 211 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 121/215 (56%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P ++GL+R+Q RE LD E+ D +H++ RQ +L+ Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ-REVNRLD-LEQLD--MHQRVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A ++P+R +D++ V +I+ + + + Sbjct: 177 LADSEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211 >gi|304312953|ref|YP_003812551.1| Thymidylate kinase [gamma proteobacterium HdN1] gi|301798686|emb|CBL46918.1| Thymidylate kinase [gamma proteobacterium HdN1] Length = 216 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 6/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I+ EG EG GK+T++ ++ L + TREPGGTP AE R +LL+ + Sbjct: 1 MKPGLLITLEGTEGVGKSTNLQFIRDTLSEQKIPFICTREPGGTPLAETLRELLLAPRDE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AE ++ AAR H+ +VIRPAL G ++CDRF D+++AYQG + L Sbjct: 61 PFDPLAELLIMFAARAQHIAHVIRPALERGLWVICDRFTDATFAYQGGGRGVPMNIIAQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +E+ PD I+LD+ +GL+R R A D FER+ E+ R ++L+ Sbjct: 121 EALVQRELRPDAVILLDISPQLGLERAGQR------AAPDRFERERCEFFERVRSVYLER 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R + VD++ V + +I+ Sbjct: 175 ADADPARYYRVDASRPLVDVQQELKDIL 202 >gi|90962199|ref|YP_536115.1| thymidylate kinase [Lactobacillus salivarius UCC118] gi|227891204|ref|ZP_04009009.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741] gi|122448751|sp|Q1WSU7|KTHY_LACS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|90821393|gb|ABE00032.1| Thymidylate kinase [Lactobacillus salivarius UCC118] gi|227867078|gb|EEJ74499.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741] Length = 208 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+G+GKT+ + + L K D ++ TREPGG +EA R ++L+ E Sbjct: 3 GKFITFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121 A EA+++AAAR H+ + + PAL EGK++LCDRF+DSS YQG RD + L Sbjct: 63 DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVI-KLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ +I LKR+ N R++ +D +++ + + K RQ +L +A Sbjct: 122 EFATENLKPDLTLYYDVEPEISLKRISNN---RQNQ-VDRLDKESMDFYHKVRQAYLSLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R ++D++ + V + L+I+ Sbjct: 178 ESNKERIKVIDASQNLDKVIDDTLSIL 204 >gi|167465293|ref|ZP_02330382.1| dTMP kinase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381217|ref|ZP_08055220.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154793|gb|EFX47064.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 221 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 123/216 (56%), Gaps = 5/216 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F++FEG +G+GKTT I LL L ++ + V TREPGGTP ++ R ++LS E Sbjct: 3 GVFVTFEGPDGSGKTTQIRLLADALNKQGFQVLQTREPGGTPISDQIRSLILSPEHQEMK 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E +++AA+R HV VI PAL +GKI+LCDRF+D+S AYQ + + + Sbjct: 63 DQTEVLLYAASRAQHVHEVILPALKQGKIVLCDRFIDASLAYQAYGLGIEFESVIEVNRF 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++P+ T +LD+PV+I R+ R LD E+K H++ R+ F I + Sbjct: 123 ASSGLLPNRTYLLDVPVEISRSRLTRR-----EEGLDRIEQKGRDYHQRVREGFHQIYKE 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 P+R ++++ + + +A I + ++ ++ + Sbjct: 178 NPERICLIEAEGNVEDIALRIQTDFFSWLKGKIGKM 213 >gi|314937925|ref|ZP_07845241.1| thymidylate kinase [Enterococcus faecium TX0133a04] gi|314941416|ref|ZP_07848309.1| thymidylate kinase [Enterococcus faecium TX0133C] gi|314948529|ref|ZP_07851909.1| thymidylate kinase [Enterococcus faecium TX0082] gi|314951284|ref|ZP_07854338.1| thymidylate kinase [Enterococcus faecium TX0133A] gi|314992885|ref|ZP_07858286.1| thymidylate kinase [Enterococcus faecium TX0133B] gi|314998089|ref|ZP_07862977.1| thymidylate kinase [Enterococcus faecium TX0133a01] gi|313587931|gb|EFR66776.1| thymidylate kinase [Enterococcus faecium TX0133a01] gi|313592689|gb|EFR71534.1| thymidylate kinase [Enterococcus faecium TX0133B] gi|313596501|gb|EFR75346.1| thymidylate kinase [Enterococcus faecium TX0133A] gi|313599839|gb|EFR78682.1| thymidylate kinase [Enterococcus faecium TX0133C] gi|313642783|gb|EFS07363.1| thymidylate kinase [Enterococcus faecium TX0133a04] gi|313645026|gb|EFS09606.1| thymidylate kinase [Enterococcus faecium TX0082] Length = 231 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 19 NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 78 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 79 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 138 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ LD+ D GL+R+ +NR + +D + + + H++ R +L + Sbjct: 139 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 193 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A P+R H VD+ SF+ V + + E Sbjct: 194 AEENPERIHKVDARKSFEEVLQTSYHTIIE 223 >gi|182678512|ref|YP_001832658.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634395|gb|ACB95169.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039] Length = 237 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 5/214 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GK+T L + + TREPGG+P AE R +LLS + G Sbjct: 22 GFFITLEGGEGTGKSTQARKLVARFEAQGLRAIATREPGGSPNAEILRDILLSGVIKPLG 81 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++F+AAR+DH++ VI+PAL G ++ DRF DS+ YQG + L L++ Sbjct: 82 PLAEALMFSAARIDHLDQVIKPALAAGTTVVSDRFADSTRVYQGVAGNLDPHRLTLLEQA 141 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 + +PD T++LDL + GL R R + +S D FE +D+ H + R+ F + + Sbjct: 142 VLNGTVPDLTLVLDLAPETGLARAAARRANIDSGDGPDRFESEDLTYHRRLREAFRALPK 201 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P RC ++D+ S V + W +Q+R+ Sbjct: 202 REPGRCLLIDADASADIVTERL----WTAIQQRL 231 >gi|301300450|ref|ZP_07206650.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851947|gb|EFK79631.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 208 Score = 135 bits (339), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+G+GKT+ + + L K D ++ TREPGG +EA R ++L+ E Sbjct: 3 GKFITFEGIDGSGKTSVLKGVIEHLNGKKIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121 A EA+++AAAR H+ + + PAL EGK++LCDRF+DSS YQG RD + L Sbjct: 63 DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVI-KLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ +I LKR+ N R++ +D +++ + + K RQ +L +A Sbjct: 122 EFATENLKPDLTLYYDVEPEISLKRISNN---RQNQ-VDRLDKESMDFYHKVRQAYLSLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R ++D++ + V + L+I+ Sbjct: 178 ESNKERIKVIDASQNLDKVIDDTLSIL 204 >gi|255023366|ref|ZP_05295352.1| thymidylate kinase [Listeria monocytogenes FSL J1-208] Length = 208 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD + L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + I Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKIINM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERFMRVDATKTPEEITETIL 200 >gi|304315605|ref|YP_003850750.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777107|gb|ADL67666.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 205 Score = 134 bits (338), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 122/212 (57%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+FEGI+G+GKTT I+LLK +L D+ V REPGGT E R++LL + Sbjct: 1 MYKGKLITFEGIDGSGKTTQINLLKEYLLNIGRDIVVLREPGGTSVGEKIRNILLDKK-N 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AEA+++AA+R + V+ VI P+L GKI++ DRF+DSS YQG ++ + Sbjct: 60 KIVPTAEALLYAASRAELVKEVIIPSLNNGKIVILDRFVDSSIVYQGYARGIGVKAVEEI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I++ ++PD TI LD+ +KR+ R D E +D+ HEK + + + Sbjct: 120 NNIAIAGLVPDLTIYLDIKPKDTIKRIDRRKD------KDRLEMEDLEFHEKVYEGYKQL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++PDR ++D+ H + +I+ + +++ Sbjct: 174 IKSRPDRYLVIDATHDIDYIQKSIVKEISKII 205 >gi|85708666|ref|ZP_01039732.1| thymidylate kinase [Erythrobacter sp. NAP1] gi|85690200|gb|EAQ30203.1| thymidylate kinase [Erythrobacter sp. NAP1] Length = 216 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 4/211 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG EG GK+T L L+ + V VTREPGGTP AEA R +LL D +G Sbjct: 7 GLFIAFEGGEGTGKSTQTLKLADALRARGKVVEVTREPGGTPGAEAIRQLLLHPPGDGWG 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+AEA++FAAAR DHV I+P+L +G ++ DRF+DSS AYQG + +L Sbjct: 67 AQAEALLFAAARSDHVAQHIKPSLEKGVWVVTDRFVDSSRAYQGGAGGLGDEAITALHAF 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TI+L++ D R+ R + R+ D + H F +A Sbjct: 127 GSDGLRPDLTILLEVDED----RLTQRLAERDGGTSDAIGGRSADYHRAVAARFRKLAEA 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+ IVD + V +L+ + +L+ + Sbjct: 183 DPNGFRIVDGTGTPDEVHNRVLDALADLLGQ 213 >gi|116874058|ref|YP_850839.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458754|sp|A0AM28|KTHY_LISW6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116742936|emb|CAK22060.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 208 Score = 134 bits (338), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + ++ D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + I + Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDISYHEKVQAGYEKIIKM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 PDR VD+ + + IL Sbjct: 179 FPDRFMRVDATMQPEEITEVIL 200 >gi|225181529|ref|ZP_03734971.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1] gi|225167777|gb|EEG76586.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1] Length = 209 Score = 134 bits (338), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 13/217 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG +GAGKTT ++ L ++ V TREPGGTP +A R +LL Sbjct: 1 MKKGFFITLEGPDGAGKTTQLTRLADAARQMGIQVVCTREPGGTPVGDAVRRILLDTAYS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFL 117 E E ++AAAR VI PAL +G+++LCDRF+DS+ AYQ GE D S + Sbjct: 61 EMVPLTEVFLYAAARAQLFHQVIGPALKQGQLVLCDRFIDSTLAYQSYGGEMDFS-FVLE 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +LQ +S + +PD T +LD+ +G++R R S D E+K + H + R F Sbjct: 120 TNLQAVSHR--LPDLTFVLDIDPSVGVER-------RGSGTADRVEQKALSFHHRVRDGF 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 L +A P+R +V S V I N V L++K Sbjct: 171 LSLADKFPERIKVVKGTQSEDEVFAVIWNQVAPLLEK 207 >gi|311070675|ref|YP_003975598.1| thymidylate kinase [Bacillus atrophaeus 1942] gi|310871192|gb|ADP34667.1| thymidylate kinase [Bacillus atrophaeus 1942] Length = 212 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 127/215 (59%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K+ L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKKSLAARGLQVTATREPGGIDIAEQIREVILNEKNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 A+ EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DAKTEALLYAAARRQHLVEKVKPALEQGHIVLCDRFIDSSLAYQG---YARGLGIDEVLS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E ++ ++MP+ T+ + + GL R+ LRE LD +++ H + R+ + + Sbjct: 119 INEFAIGDMMPNLTVYFSIKPEEGLSRIHAN-GLREKNRLDL---EELSFHTRVREGYHE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P R +D++ S + V ++ ++ E ++K Sbjct: 175 LMKRFPKRFRTIDASQSKERVIEDVQIVINEALKK 209 >gi|227550403|ref|ZP_03980452.1| thymidylate kinase [Enterococcus faecium TX1330] gi|257888432|ref|ZP_05668085.1| thymidylate kinase [Enterococcus faecium 1,141,733] gi|257897193|ref|ZP_05676846.1| thymidylate kinase [Enterococcus faecium Com12] gi|257899191|ref|ZP_05678844.1| thymidylate kinase [Enterococcus faecium Com15] gi|293379610|ref|ZP_06625747.1| dTMP kinase [Enterococcus faecium PC4.1] gi|293572059|ref|ZP_06683070.1| thymidylate kinase [Enterococcus faecium E980] gi|227180462|gb|EEI61434.1| thymidylate kinase [Enterococcus faecium TX1330] gi|257824486|gb|EEV51418.1| thymidylate kinase [Enterococcus faecium 1,141,733] gi|257833758|gb|EEV60179.1| thymidylate kinase [Enterococcus faecium Com12] gi|257837103|gb|EEV62177.1| thymidylate kinase [Enterococcus faecium Com15] gi|291607844|gb|EFF37155.1| thymidylate kinase [Enterococcus faecium E980] gi|292641759|gb|EFF59932.1| dTMP kinase [Enterococcus faecium PC4.1] Length = 214 Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 2 NGLFITIEGPDGAGKTSILNELFPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 62 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ LD+ D GL+R+ +NR + +D + + + H++ R +L + Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A P+R H VD+ SF+ V + + E Sbjct: 177 AEENPERIHKVDARKSFEEVLQTSYHTIIE 206 >gi|145596534|ref|YP_001160831.1| thymidylate kinase [Salinispora tropica CNB-440] gi|145305871|gb|ABP56453.1| thymidylate kinase [Salinispora tropica CNB-440] Length = 705 Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats. Identities = 82/215 (38%), Positives = 120/215 (55%), Gaps = 12/215 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVD 60 ++GLF+ FEG EGAGK+T ++LL L+ + DV VTREPG T E R +LL G + Sbjct: 446 SAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGVGERIRSLLLGQPGSE 505 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA R HV V+RPAL G ++ DR++DSS AYQG + L +D + Sbjct: 506 VPSPRAEALLYAADRAHHVATVVRPALARGAVVTSDRYVDSSLAYQG---VGRTLPVDEV 562 Query: 121 QEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +S + PD ++LD+ + GL RV R + D+ E + V HE+ R F Sbjct: 563 SWLSSWATGGLKPDLVVLLDIDPNTGLSRVAARGGVS-----DHLEAESVSFHERVRYAF 617 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD+A P R ++D+A +A + V EL+ Sbjct: 618 LDLAAADPRRYLVLDAARPTDEIADEVARRVAELL 652 >gi|300214869|gb|ADJ79285.1| Thymidylate kinase (dTMP kinase) [Lactobacillus salivarius CECT 5713] Length = 208 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 124/207 (59%), Gaps = 7/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62 G F++FEGI+G+GKT+ + + L K D ++ TREPGG +EA R ++L+ E Sbjct: 3 GKFVTFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121 A EA+++AAAR H+ + + PAL EGK++LCDRF+DSS YQG RD + L Sbjct: 63 DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVI-KLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ +I LKR+ N R++ +D +++ + + K RQ +L +A Sbjct: 122 EFATENLKPDLTLYYDVEPEISLKRISNN---RQNQ-VDRLDKESMDFYHKVRQAYLSLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R ++D++ + V + L+I+ Sbjct: 178 ESNKERIKVIDASQNLDKVIDDTLSIL 204 >gi|225848089|ref|YP_002728252.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643400|gb|ACN98450.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1] Length = 204 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 8/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEGIEG+GK+T L +L ++TREPGGT + R +LLS + F Sbjct: 2 GVFITFEGIEGSGKSTQAKRLYEYLTNIGIKAYLTREPGGTSIGKKIREILLSHWEENFP 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AE +++ A R HV N+I+P L + I++ DRF DS+ AYQ + +D L ++ Sbjct: 62 SIAELLLYQADRNIHVNNIIKPLLQQDYIVISDRFYDSTTAYQHYARGIDYSIVDYLNKL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + P T +LDLPV KR+ ES L++ H+K R+ FL IA Sbjct: 122 ATEGIKPHITFLLDLPVQEAFKRLNREKDRLESEGLNF--------HQKVREGFLKIADM 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 + DR ++D S + ILNI+ E Sbjct: 174 EKDRVIVLDGLKSPDEIFNQILNILKE 200 >gi|46908871|ref|YP_015260.1| thymidylate kinase [Listeria monocytogenes str. 4b F2365] gi|47092313|ref|ZP_00230104.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858] gi|47095500|ref|ZP_00233109.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854] gi|224499368|ref|ZP_03667717.1| thymidylate kinase [Listeria monocytogenes Finland 1988] gi|226225244|ref|YP_002759351.1| thymidylate kinase [Listeria monocytogenes Clip81459] gi|254824945|ref|ZP_05229946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194] gi|254830871|ref|ZP_05235526.1| thymidylate kinase [Listeria monocytogenes 10403S] gi|254852005|ref|ZP_05241353.1| thymidylate kinase [Listeria monocytogenes FSL R2-503] gi|254899850|ref|ZP_05259774.1| thymidylate kinase [Listeria monocytogenes J0161] gi|254912944|ref|ZP_05262956.1| thymidylate kinase [Listeria monocytogenes J2818] gi|254931036|ref|ZP_05264395.1| thymidylate kinase [Listeria monocytogenes HPB2262] gi|254937325|ref|ZP_05269022.1| thymidylate kinase [Listeria monocytogenes F6900] gi|254991884|ref|ZP_05274074.1| thymidylate kinase [Listeria monocytogenes FSL J2-064] gi|255025775|ref|ZP_05297761.1| thymidylate kinase [Listeria monocytogenes FSL J2-003] gi|255519688|ref|ZP_05386925.1| thymidylate kinase [Listeria monocytogenes FSL J1-175] gi|300763550|ref|ZP_07073548.1| thymidylate kinase [Listeria monocytogenes FSL N1-017] gi|59798313|sp|Q71W79|KTHY_LISMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|259494275|sp|C1KZP7|KTHY_LISMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46882144|gb|AAT05437.1| thymidylate kinase [Listeria monocytogenes serotype 4b str. F2365] gi|47016110|gb|EAL07034.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854] gi|47019292|gb|EAL10034.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858] gi|225877706|emb|CAS06420.1| Putative thymidylate kinase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605303|gb|EEW17911.1| thymidylate kinase [Listeria monocytogenes FSL R2-503] gi|258609931|gb|EEW22539.1| thymidylate kinase [Listeria monocytogenes F6900] gi|293582582|gb|EFF94614.1| thymidylate kinase [Listeria monocytogenes HPB2262] gi|293590945|gb|EFF99279.1| thymidylate kinase [Listeria monocytogenes J2818] gi|293594185|gb|EFG01946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194] gi|300515827|gb|EFK42876.1| thymidylate kinase [Listeria monocytogenes FSL N1-017] gi|328468175|gb|EGF39181.1| thymidylate kinase [Listeria monocytogenes 1816] gi|328469553|gb|EGF40494.1| thymidylate kinase [Listeria monocytogenes 220] Length = 208 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD + L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + + Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERFMRVDATKTPEEITETIL 200 >gi|313631628|gb|EFR98875.1| thymidylate kinase [Listeria seeligeri FSL N1-067] Length = 208 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT ++L + ++ D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + I Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDISYHEKVQAGYEKIMAM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 PDR VD+ + + + IL Sbjct: 179 FPDRYMRVDATKTPEEITDVIL 200 >gi|121534353|ref|ZP_01666177.1| dTMP kinase [Thermosinus carboxydivorans Nor1] gi|121307123|gb|EAX48041.1| dTMP kinase [Thermosinus carboxydivorans Nor1] Length = 210 Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 9/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG +GAGKTT ++LL +L+ + + V TREPGGTP +A R +LL Sbjct: 3 GLFITFEGADGAGKTTQLALLADYLRAQGWPVRCTREPGGTPLGDAIRALLLDPANARMA 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 EA+++ AAR HV VI PAL G+I+L DR+ DS+ YQG R +H L ++ Sbjct: 63 PRTEALLYMAARAQHVAEVIAPALARGEIVLSDRYADSTIVYQGVARQLPEH-ELAAINA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI+LD ++ R+ R D ER+ HE+ RQ FL +A Sbjct: 122 FATGGLEPDLTILLDCRQEVLSGRMAGR------GAKDRIEREAARFHEQVRQGFLRLA- 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 DR ++++ S Q+V ++ V + + +R S Sbjct: 175 AASDRFCVIEADGSVQAVHARVIAAVQQFLDRRGS 209 >gi|312866475|ref|ZP_07726693.1| dTMP kinase [Streptococcus downei F0415] gi|311098169|gb|EFQ56395.1| dTMP kinase [Streptococcus downei F0415] Length = 206 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 120/203 (59%), Gaps = 4/203 (1%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ EG +GAGKT+ + L L+ + + V TREPGG AE+ R V+L + Sbjct: 1 MITLEGPDGAGKTSVLERLVPLLEAQGHQVVTTREPGGVAIAESIREVILDVKNTAMDEK 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +++ AAR H + P L +GK++L DRF+DSS AYQG +D L + ++ Sbjct: 61 TELLLYIAARRQHFVEKVLPDLAQGKLVLVDRFIDSSVAYQGYGRGLSVTDIDWLNDYAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 ++ PD T++ DLP ++GL R++ + +RE LD E+ D +H++ RQ +L++A++QP Sbjct: 121 EDTKPDLTLLFDLPSELGLARIE-QAEVREVNRLD-LEKLD--MHQRVRQGYLELAKSQP 176 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++D+A + V + L+ + Sbjct: 177 ERIKVIDAAQELEKVVADALSTI 199 >gi|220932870|ref|YP_002509778.1| dTMP kinase [Halothermothrix orenii H 168] gi|254808299|sp|B8CZT1|KTHY_HALOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219994180|gb|ACL70783.1| dTMP kinase [Halothermothrix orenii H 168] Length = 207 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 121/205 (59%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EGIEG+GK+T I +L + L++ +DV +TREPGGTP + R +LL + G Sbjct: 3 GLFITLEGIEGSGKSTQIEMLYKRLKKDGFDVIITREPGGTPIGKEIRKLLLDPD-NIMG 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+AE +++AA R HV +I+PAL GK++L DRF+DSS AYQG + ++ E Sbjct: 62 AKAEFLLYAADRAQHVVELIKPALESGKVVLADRFIDSSIAYQGYGRGLDIDVVKTVNEW 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T +LDL V+ GL+R + YS D ER+ V H + RQ + +A + Sbjct: 122 VIDGCWPDLTFVLDLDVEKGLERARG-YSPDNQG--DRLERELVTFHRRVRQAYHQLAED 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + R ++D+ S + + I + V Sbjct: 179 R--RFIMLDADRSREEIHREIYHKV 201 >gi|150387935|ref|YP_001317984.1| dTMP kinase [Alkaliphilus metalliredigens QYMF] gi|149947797|gb|ABR46325.1| dTMP kinase [Alkaliphilus metalliredigens QYMF] Length = 211 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFISFEG++GAGK+T I K F + + Y V +TREPGGT +E R +L Sbjct: 1 MKNGLFISFEGVDGAGKSTQIHYAKDFFEERGYKVSLTREPGGTRISEIIREAILDRTHQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HVE I PAL EG+++LCDRF+DSS YQG + ++ Sbjct: 61 EMTHRTEALLYAASRAQHVEEFILPALAEGRVVLCDRFVDSSMVYQGRGRGLGFDAVRNI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD TI ++ + L R+ +++E D E++ + H + + D+ Sbjct: 121 NQFATGGLEPDLTIFFNIHPQVSLGRI----NVKEKG--DRLEQEKMAFHYTVYESYHDL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A+ R ++++ + + + + I+ L+++ Sbjct: 175 AQMNSSRIKVIEANQEVEKIKSEVEKIMTNLLRR 208 >gi|83319417|ref|YP_424009.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123536025|sp|Q2STA4|KTHY_MYCCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|83283303|gb|ABC01235.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 213 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 125/216 (57%), Gaps = 7/216 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG S++++ +D + E+ Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQG---SARNIGVDVVSEVQ 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+ +C L L D+ + R +R + + ++++ +K Q +L++ +N Sbjct: 118 -QIVLKNCLPDLTLFFDVSFSEAEKRMQIRGESSKNRLDKEENNFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217 P R ++D+ V + I+ E + +KR S Sbjct: 177 PKRIKVIDANKDIDQVYNQAIKIILEKLKENEKRTS 212 >gi|300744314|ref|ZP_07073333.1| dTMP kinase [Rothia dentocariosa M567] gi|300380039|gb|EFJ76603.1| dTMP kinase [Rothia dentocariosa M567] Length = 249 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 85/216 (39%), Positives = 123/216 (56%), Gaps = 13/216 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI FEG +GAGKTT ++ L+ L+ + Y V TREPGGTP EA R ++L G E Sbjct: 20 GLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSEVD 79 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AEA++FAA+R H IRPAL G ++L DR+LDSS AYQG ++L D++ ++ Sbjct: 80 ARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQG---IGRNLGKDTITDL 136 Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S ++++P TI+LD+P+ +R+ +R +D E + F DI Sbjct: 137 SRWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKACVHTAFADI 190 Query: 181 ARNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215 AR D H +VD S +V +L +V L++ R Sbjct: 191 ARQNADGAHYVVDGCGSVDAVHERVLEVVRPLLKSR 226 >gi|241759767|ref|ZP_04757867.1| dTMP kinase [Neisseria flavescens SK114] gi|241319775|gb|EER56171.1| dTMP kinase [Neisseria flavescens SK114] Length = 208 Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 117/199 (58%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ V + Sbjct: 5 FITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNP-VTQVSLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 64 TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE+++ + R+++L A QP Sbjct: 124 GDFRPDLTLLLDVPLEVSMARINQ---TREK---DRFEQEEAEFFNRVREVYLQRANEQP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++DS+ S +V I Sbjct: 178 ERYAVIDSSQSLDAVKNQI 196 >gi|302878048|ref|YP_003846612.1| thymidylate kinase [Gallionella capsiferriformans ES-2] gi|302580837|gb|ADL54848.1| thymidylate kinase [Gallionella capsiferriformans ES-2] Length = 200 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 13/204 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG++GAGK+TH++ L++ DV VTREPGGTP E R +LL+ Sbjct: 4 FITFEGVDGAGKSTHLAWFAATLRQHGVDVVVTREPGGTPLGEQLREMLLN---QPMSIG 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++ AAR++HVE +I+PAL+ GK ++ DRF D+S+AYQG + + D L+++ Sbjct: 61 TEAMLMFAARVEHVEQIIKPALLAGKWVISDRFSDASFAYQG---GGRGMDWDKLRQLEQ 117 Query: 126 Q-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD T+ D+PV++ R+ N S LD FE++ E+ R + Sbjct: 118 WVDLRPDLTLFFDVPVEVARARLSNNVS------LDRFEQEQGEFFERVRAGYHRRVAEN 171 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 P R ++D+A S V + +IV Sbjct: 172 PPRYAVIDAAQSIALVQQQLQSIV 195 >gi|256384283|gb|ACU78853.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385116|gb|ACU79685.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455961|gb|ADH22196.1| dTMP kinase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 213 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 7/216 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEAIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG S++++ +D + E+ Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQG---SARNIGVDVVSEVQ 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+ +C L L D+ + R +R + + +++ +K Q +L++ +N Sbjct: 118 -QIVLKNCLPDLTLFFDVSFSEAEKRMQIRGESSKNRLDKEKSDFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217 P R ++D+ V + I+ E + +KR S Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKENEKRTS 212 >gi|167042818|gb|ABZ07536.1| putative thymidylate kinase [uncultured marine microorganism HF4000_ANIW137I15] Length = 247 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 80/219 (36%), Positives = 114/219 (52%), Gaps = 11/219 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ I+FEGIEG+GKTT SLL L+ + V TREPGGT E R ++L G + Sbjct: 24 AGILITFEGIEGSGKTTQASLLADRLREQGLSVFPTREPGGTHLGEGIRRLVLEPGQEAI 83 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + AAR HV IRPAL GK++LCDRF DS+ YQG ++ + Sbjct: 84 DPVAELFLMEAARAQHVAAKIRPALDAGKVVLCDRFTDSTLVYQGLARGLAWKTIEDVNL 143 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-------ESACLDYFERKDVMIHEKRRQ 175 ++ + + P TI+LDL + GL R + R E+ + F+ +D HE R Sbjct: 144 LAAKGIRPHTTILLDLDISAGLARTRTRADSAVQADGSIETGETNRFDLEDREFHEIVRS 203 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 FL +A+ P R +V +A S + V VW ++K Sbjct: 204 GFLRLAKEDPGRVKVVRAAGSAEEVHEE----VWRALEK 238 >gi|311028959|ref|ZP_07707049.1| thymidylate kinase [Bacillus sp. m3-13] Length = 212 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 4/211 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG EGAGKT+ I L L + + + +TREPGG AE R+V+L C E Sbjct: 3 GLFITFEGPEGAGKTSVIQKLGAELTEQEFPILLTREPGGIAIAEQIRNVILDCDNTEMD 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AAAR H+ + PAL E KI+LCDRF+DSS AYQG + S+ E Sbjct: 63 ARTEALLYAAARRQHLVERVIPALKENKIVLCDRFIDSSLAYQGYARGIGVEDVLSINEF 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +++MP TI D+ + GLKR+ + RE LD ++ + H K ++ + + Sbjct: 123 ATEKMMPSLTIYFDIEPEAGLKRIAANNN-REINRLD---QEKLDFHYKVKEGYDLVKEK 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R +VD++ F+SV + ++ K Sbjct: 179 YGERIRVVDASMDFESVCNQVREVLISYFSK 209 >gi|212637874|ref|YP_002314394.1| Thymidylate kinase [Anoxybacillus flavithermus WK1] gi|226732650|sp|B7GFF9|KTHY_ANOFW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|212559354|gb|ACJ32409.1| Thymidylate kinase [Anoxybacillus flavithermus WK1] Length = 209 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 S LF SFEG EGAGKTT + +LK +L ++ DV TREPGG AE R V+L + Sbjct: 2 SYLFFSFEGPEGAGKTTIVRMLKDYLSEQHVDVVATREPGGIDIAEQIRAVILHPNNERM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL +GK++LCDRF+DSS AYQG ++ L +D + Sbjct: 62 DARTEALLYAAARRQHLVEKVIPALKDGKVVLCDRFIDSSLAYQG---VARGLGIDEILA 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I +++ MP TI D+ +GL R++ S RE LD +++ HE+ R+ ++ Sbjct: 119 INAFAIENWMPILTIYFDIDPSLGLARIRENGS-REVNRLDL---EELSFHEQVRKGYMV 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P+R VD+ V ++ ++ L++K Sbjct: 175 LLDRFPNRIKKVDATQPITKVFEDVWALIEPLIRK 209 >gi|304385465|ref|ZP_07367810.1| thymidylate kinase [Pediococcus acidilactici DSM 20284] gi|304328672|gb|EFL95893.1| thymidylate kinase [Pediococcus acidilactici DSM 20284] Length = 209 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 124/212 (58%), Gaps = 5/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FISFEG +GAGKTT + ++++ + R + VTREPGG P +EA R ++L E Sbjct: 2 NGHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNNTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AAAR H+ I PAL G+++ CDR++DSS AYQG + + Sbjct: 62 MDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + +P+ TI LD+ ++GLKR+ + +D + + + HE+ R +L +A Sbjct: 122 LFATEGCLPEKTIYLDVSAEVGLKRIMT----HRTDDVDRLDLEQLDFHERVRDAYLALA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P+R ++D++ S V ++N++ ++++ Sbjct: 178 KRYPERIVVIDASQSIGDVKKAVINVLDQILK 209 >gi|238062269|ref|ZP_04606978.1| dTMP kinase [Micromonospora sp. ATCC 39149] gi|237884080|gb|EEP72908.1| dTMP kinase [Micromonospora sp. ATCC 39149] Length = 698 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 118/215 (54%), Gaps = 11/215 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++SGLF+ FEG EGAGK+T ++ L L+ + +V VTREPG T R +LL + Sbjct: 457 VSSGLFVVFEGGEGAGKSTQLAALAEQLRGQGREVVVTREPGATEVGARIRALLLDATAE 516 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA R HV V+RPAL G +++ DR++DSS AYQG + + L +D + Sbjct: 517 GPSPRAEALLYAADRAHHVATVVRPALARGAVVISDRYVDSSLAYQG---AGRTLPVDEV 573 Query: 121 QEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +S + PD ++LD+ GL RV R S D E + V HE+ R F Sbjct: 574 SWLSSWATGGLKPDLVVLLDVDPHTGLSRVAAR-----SEGTDRLEAESVAFHERVRYAF 628 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD+A N P R ++D++ + A + V E + Sbjct: 629 LDLAANDPKRYLVLDASRPVEETAALVARRVKEFL 663 >gi|77464120|ref|YP_353624.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1] gi|126462963|ref|YP_001044077.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17029] gi|123591351|sp|Q3J0G1|KTHY_RHOS4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223108|sp|A3PLT9|KTHY_RHOS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77388538|gb|ABA79723.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1] gi|126104627|gb|ABN77305.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17029] Length = 217 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F++ EGI+G+GK+ + L L + DV VTREPGGTP EA R ++L+ + + Sbjct: 5 GFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAWD 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR+ HV VI PAL +G++++ DR+ S+ AYQG F+ +L Sbjct: 65 PMAELLLMTAARVQHVRRVIAPALAQGRVVISDRYAGSTLAYQGTGRGLSEAFIRTLHAE 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ PD T++LDL IGL R + R + E+ FE D+ HE+ R FL A Sbjct: 125 ATGDLWPDLTLVLDLEAGIGLARSRRRLT-GETLDEGRFESLDLAFHERIRAAFLAQAAR 183 Query: 184 QPDRCHIVDSAHSFQSV 200 P R ++D++ + + V Sbjct: 184 DPGRHAVIDASGTPEEV 200 >gi|296271416|ref|YP_003654048.1| thymidylate kinase [Thermobispora bispora DSM 43833] gi|296094203|gb|ADG90155.1| thymidylate kinase [Thermobispora bispora DSM 43833] Length = 686 Score = 134 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 8/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG EG+GKTT +L +L+ + YDV TREPGGT R +LL Sbjct: 466 GLFIAFEGGEGSGKTTQARMLAIWLRDQGYDVVQTREPGGTKLGMRLRAILLDSAHQGIS 525 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +EA+++AA R +HVE VIRPAL G ++ DR++DSS AYQG + + E Sbjct: 526 GRSEALLYAADRAEHVEKVIRPALRRGSAVISDRYVDSSLAYQGAGRMLDRDEVARINEW 585 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD T++LD+P +GL+R+ + D E + + HE+ R+ +A Sbjct: 586 ATGGLVPDLTVVLDVPPAVGLRRM--------GSPADRLEAEPLEFHERVRRELRALAAA 637 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +VD + V I + V E++ Sbjct: 638 EPERYLVVDGTLPQEEVTRIIQDRVREIL 666 >gi|255017566|ref|ZP_05289692.1| thymidylate kinase [Listeria monocytogenes FSL F2-515] Length = 208 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD + L + Sbjct: 64 KNEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + + Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERFMRVDATKTPEEITETIL 200 >gi|269468275|gb|EEZ79959.1| thymidylate kinase [uncultured SUP05 cluster bacterium] Length = 205 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 115/204 (56%), Gaps = 6/204 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ +G+EGAGK+T I+ + +L+ K +V +TREPGGT E R +LLS Sbjct: 1 MQKGKFITIDGVEGAGKSTQINFICGYLKDKGINVALTREPGGTELGEKIRTLLLSPKTK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E ++ AAR +H+ I P L +G +L DRF D+SYAYQG + L Sbjct: 61 SMHSDTELLLMFAARNEHIHAKIMPILEKGDWVLSDRFTDASYAYQGGGRGLDVDRIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E +Q+ PD T++LD+PV++G+ RV++R D E +D+ + R ++ Sbjct: 121 EEWVLQDFTPDMTLLLDVPVELGMSRVESR------GEKDRIELEDMDFFNRVRDAYISR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ PDR ++DS+ + + I Sbjct: 175 SKQFPDRIKLIDSSETVEHTKEQI 198 >gi|329894944|ref|ZP_08270743.1| Thymidylate kinase [gamma proteobacterium IMCC3088] gi|328922673|gb|EGG30008.1| Thymidylate kinase [gamma proteobacterium IMCC3088] Length = 212 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 119/207 (57%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG GK+T ++L+K L+++ V VTREPGGT AE R VLLS + Sbjct: 1 MRKGYFITFEGGEGTGKSTQLALVKEALEQRGIKVCVTREPGGTELAEEIRRVLLSPRNE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGER--DSSQHLFL 117 E ++ AAR H+ VI PA+ G+ +LCDRF D++YAY QG R D + L Sbjct: 61 TVDPTTELLLMFAARAQHLAQVILPAVDRGEWVLCDRFTDATYAYQQGGRGVDEDKIAIL 120 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L ++ PD T++ D P++I L+R+++R LD FE++ + ++ R + Sbjct: 121 ERLVQMGFN---PDLTLLFDAPIEISLQRMRDR------GALDRFEQEGLEFMKRVRSTY 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L AR + +R ++D+ + V ++ Sbjct: 172 LTRARVESERFRVIDATATVDDVRASV 198 >gi|126736701|ref|ZP_01752440.1| thymidylate kinase [Roseobacter sp. CCS2] gi|126713816|gb|EBA10688.1| thymidylate kinase [Roseobacter sp. CCS2] Length = 202 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 6/204 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+FEGI+G+GK+T L+ + DV +TREPGG+P AE R ++L+ D Sbjct: 1 MNKPRFITFEGIDGSGKSTQSRRFADHLRAQGGDVVLTREPGGSPGAEEIRQLVLTGDPD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E E ++F A+R DH+E I PAL GK ++ DRF DS+ YQG +DSL Sbjct: 61 RWSPETEILLFTASRRDHLEKTIEPALTAGKTVISDRFADSTRVYQGATRGDLRAMVDSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T I+D+ L+R L + D FE + E R FL + Sbjct: 121 HRLMIAR-EPDLTFIIDMDPATALER-----GLARKSGEDRFEDFGLGFQETLRHGFLAL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A + P RC ++D + +A+ I Sbjct: 175 AHDHPKRCVLIDGNRTPDQIASEI 198 >gi|254514398|ref|ZP_05126459.1| thymidylate kinase [gamma proteobacterium NOR5-3] gi|219676641|gb|EED33006.1| thymidylate kinase [gamma proteobacterium NOR5-3] Length = 210 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 6/208 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EGAGK+T ++ ++R L+ D+ TREPGGT E R LL+ Sbjct: 1 MFITLEGGEGAGKSTAMTYVERGLREAGVDLICTREPGGTRLGEQLRETLLAPSETGINP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ AAR H+ I PAL G+ +LCDRF D+SYAYQG + + L+E+ Sbjct: 61 LAELLMMFAARAQHLSECILPALGRGQWVLCDRFTDASYAYQGAGRNMGESPVAVLEELV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T++LD+P + GL R + R LD FE++D E+ RQ +L A+ Sbjct: 121 QGGLRPDLTLLLDVPSETGLSRARGR------GALDRFEQEDHAFFERVRQSYLSRAKRS 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 R I+D++ +V + +V +L+ Sbjct: 175 SGRYQIIDASADLAAVEQALEAVVQDLL 202 >gi|149197612|ref|ZP_01874662.1| thymidylate kinase [Lentisphaera araneosa HTCC2155] gi|149139182|gb|EDM27585.1| thymidylate kinase [Lentisphaera araneosa HTCC2155] Length = 209 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 123/218 (56%), Gaps = 14/218 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ FI EG EGAGK+T I L+K L+ + V + REPGGTP AE R V+ S VD Sbjct: 1 MDCSRFIVVEGSEGAGKSTAIKLIKNLLEEQGQTVTLAREPGGTPMAEDLRTVIKSASVD 60 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118 E A E ++ AAR+ VENVIRPAL G+ L+CDRF S++AYQG + L LD Sbjct: 61 EKVDARTELLIMYAARVQLVENVIRPALERGEWLVCDRFFYSTWAYQG---GGRELGLDL 117 Query: 119 --SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +I + ++ P TI +DL ++GL+R + R LD FE + + + R + Sbjct: 118 IRPIHDICLADMTPGLTIFMDLDPELGLERARGR------GALDRFELEQIDFFHRTRAM 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + ++ +D++ S + V ++LN++ +++ Sbjct: 172 YTQLC-DERKEMQKLDASQSLEEVHAHLLNLIRPYIEQ 208 >gi|237756554|ref|ZP_04585078.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691282|gb|EEP60366.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5] Length = 204 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 8/197 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIE +GKTT I+LL +L+ +V TREPGGT + R +LLS ++F Sbjct: 2 GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ A R H+ N+I+P+L I+L DR++DS+ AYQ + + L + Sbjct: 62 YIAELLLYEADRNIHIHNIIKPSLEADYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P+ T ++D+P I LKR+ S D E +D+ H+K R+ FL IA N Sbjct: 122 ATDRLKPNLTFLIDIPAQISLKRL--------SKTKDRIESEDIEFHKKLREGFLKIAEN 173 Query: 184 QPDRCHIVDSAHSFQSV 200 + DR ++D + Sbjct: 174 EKDRFVVIDGTMDIMEI 190 >gi|315639687|ref|ZP_07894827.1| thymidylate kinase [Enterococcus italicus DSM 15952] gi|315484648|gb|EFU75104.1| thymidylate kinase [Enterococcus italicus DSM 15952] Length = 214 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 11/210 (5%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLFI+ EG +GAGKTT ++ L R + N V TREPGG +E R ++L +E Sbjct: 2 SGLFITIEGPDGAGKTTALNELFPRLEKETNRKVIATREPGGVRISEKIRDLILDPNNEE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119 EA+++AAAR H+ VI PAL G I+LCDRF+DSS AYQG + + + ++S Sbjct: 62 MDVRTEALLYAAARRQHLIEVIMPALAAGHIVLCDRFVDSSLAYQG---AGRRIGIESVA 118 Query: 120 -LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E + + + PD T+ LD+ D GL+R+Q A +D E + + H++ R +L Sbjct: 119 QINEFATEGLQPDFTLYLDIDSDEGLRRIQT----SRKAGIDRLETEGLEFHQRVRHAYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +P+R ++ + Q V I+ Sbjct: 175 KLVEKEPERFSLIHANQDVQEVVNECYTII 204 >gi|293550622|ref|ZP_06673290.1| thymidylate kinase [Enterococcus faecium E1039] gi|291603243|gb|EFF33427.1| thymidylate kinase [Enterococcus faecium E1039] Length = 214 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 2 NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 62 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ LD+ D GL+R+ +NR + +D + + + H++ R +L + Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKNRQN-----QIDRLDSEGLEFHQRVRHAYLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A P+R H VD+ F+ V + + E Sbjct: 177 AEENPERIHKVDARKGFEEVLQTSYHTIIE 206 >gi|290891876|ref|ZP_06554873.1| thymidylate kinase [Listeria monocytogenes FSL J2-071] gi|290558470|gb|EFD91987.1| thymidylate kinase [Listeria monocytogenes FSL J2-071] Length = 208 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + + Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERFMRVDATKTPEEITETIL 200 >gi|262368570|ref|ZP_06061899.1| thymidylate kinase [Acinetobacter johnsonii SH046] gi|262316248|gb|EEY97286.1| thymidylate kinase [Acinetobacter johnsonii SH046] Length = 199 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 80/205 (39%), Positives = 109/205 (53%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + L+++ V +TREPGGTP AE R +LLS +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIYEHLEQQGQQVVLTREPGGTPMAEQIRSLLLSVNHEESMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL + K +LCDRF D+S+AYQ L L E Sbjct: 61 NDTELLLMYAARAQHLQQVIVPALTKHKTVLCDRFTDASFAYQCAGRGLSQSKLQLLNEN 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T LD P++ G+ R RE LD FE++ V EK R + + Sbjct: 121 FVSH-MPDITFWLDAPIETGMSRA------RERGALDRFEQEKVTFFEKVRAGYQQLWEQ 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+R +D+ S + V L + Sbjct: 174 YPERVKRLDATQSPEQVFAQALQYL 198 >gi|221639987|ref|YP_002526249.1| Thymidylate kinase [Rhodobacter sphaeroides KD131] gi|254808303|sp|B9KKV1|KTHY_RHOSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221160768|gb|ACM01748.1| Thymidylate kinase [Rhodobacter sphaeroides KD131] Length = 217 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 112/197 (56%), Gaps = 1/197 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F++ EGI+G+GK+ + L L + DV VTREPGGTP EA R ++L+ + + Sbjct: 5 GFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAWD 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR+ HV VI PAL +G++++ DR+ S+ AYQG F+ +L Sbjct: 65 PMAELLLMTAARVQHVRRVIAPALAQGQVVISDRYAGSTLAYQGTGRGLSEAFIRTLHAE 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ PD T++LDL IGL R + R + E+ FE D+ HE+ R FL A Sbjct: 125 ATGDLWPDLTLVLDLEAGIGLARSRRRLT-GETLDEGRFESLDLAFHERIRAAFLAQAAR 183 Query: 184 QPDRCHIVDSAHSFQSV 200 P R ++D++ + + V Sbjct: 184 DPGRHAVIDASGTPEEV 200 >gi|56961832|ref|YP_173554.1| thymidylate kinase [Bacillus clausii KSM-K16] gi|59798132|sp|Q5WLY2|KTHY_BACSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56908066|dbj|BAD62593.1| thymidylate kinase [Bacillus clausii KSM-K16] Length = 213 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 4/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG EGAGKTT I+L++ L + Y+V TREPGG AE R +LL Sbjct: 1 MKKGLFITVEGGEGAGKTTIINLVQEQLATQGYEVIRTREPGGVELAEQIRDLLLHTQGV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AAAR +H+ I PAL EG ++LCDR++DSS YQG + ++ Sbjct: 61 EMDNRTEALLYAAARREHLIKKIVPALAEGALVLCDRYIDSSLVYQGHARGIGMEEVRAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ MPD T+ D+ +IGL+RVQ + ++R LD ++ + H++ ++ + + Sbjct: 121 NGFAIETYMPDLTLYFDVEPEIGLERVQ-KDAVRSWNRLD---QETLTFHKRVQEGYKKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + +P+R +D+ SF V Sbjct: 177 LKAEPERIKAIDANRSFAEV 196 >gi|116617408|ref|YP_817779.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431245|ref|ZP_03913299.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122272391|sp|Q03ZG6|KTHY_LEUMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116096255|gb|ABJ61406.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227353007|gb|EEJ43179.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 213 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 118/205 (57%), Gaps = 13/205 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +FISFEG EGAGKT+ + L L+ K D+ TREPGG P +EA R +L Sbjct: 1 MPKPIFISFEGPEGAGKTSVLEALISELKTKLGDDLVTTREPGGNPISEAIRSILQPEED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ I+PAL + KI++ DR++DSS AYQG + L +D+ Sbjct: 61 NGMDKRTEALLYTAARRQHLVENIKPALDQNKIVISDRYVDSSLAYQG---GGRGLGIDN 117 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQ 175 + EI ++ ++PD TI LD+PV+IGL RV +NR +D +++ + H+K R+ Sbjct: 118 IWEINQFAIDGLLPDMTIYLDVPVEIGLARVNENR-----QGKIDRLDKESISFHQKVRE 172 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSV 200 +L + DR IVD+ V Sbjct: 173 TYLKLQSEFSDRIKIVDATQPLNKV 197 >gi|92113730|ref|YP_573658.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043] gi|122420045|sp|Q1QX49|KTHY_CHRSD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91796820|gb|ABE58959.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 6/205 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T+++ + +L + +V TREPGGTP AEA R +LL Sbjct: 1 MTPGRFITLEGGEGVGKSTNVAFVCDWLSARGIEVVRTREPGGTPRAEAIRELLLDPAPQ 60 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E AE ++ AAR H+ IRPAL G ++CDRF D+++AYQG + + Sbjct: 61 EPLDETAELLLMFAARAQHLAARIRPALARGAWVVCDRFTDATFAYQGGGRGLDETRIAT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ + Q + PD T++LD+PV+ +RV+ R R D FER+ R+ +L Sbjct: 121 LEALVQQGLQPDLTLLLDMPVEAAQRRVERRGIER-----DRFERERGAFFNAVRESYLA 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 A P R ++D+ S ++V +I Sbjct: 176 RAAQAPTRFAVIDADRSLEAVQASI 200 >gi|77406664|ref|ZP_00783707.1| thymidylate kinase [Streptococcus agalactiae H36B] gi|77174736|gb|EAO77562.1| thymidylate kinase [Streptococcus agalactiae H36B] Length = 211 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P ++GL+R+Q RE LD E+ D +H++ RQ +L+ Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ-REVNRLD-LEQLD--MHQRVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A +P+R +D++ V +I+ + + + Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211 >gi|294787793|ref|ZP_06753037.1| dTMP kinase [Simonsiella muelleri ATCC 29453] gi|294484086|gb|EFG31769.1| dTMP kinase [Simonsiella muelleri ATCC 29453] Length = 207 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 115/199 (57%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FIS +GI+GAGKTT ++++K++ +++N V TREPGGTP E R +LL+ + Sbjct: 5 FISLDGIDGAGKTTQLNVIKQWFEKQNLPVQFTREPGGTPLGEKLRDILLNP-TSQINLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H++++I P L + ++ DRF D+++AYQG + L+ Sbjct: 64 TETLLMFAARQQHLDDIILPTLNQNISIVSDRFTDATFAYQGGGRGLPESDIAQLENWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI+LD+P++I ++R++N RE D FER++ + R +L+ A P Sbjct: 124 GSLRPDLTILLDVPLEIAIQRIENS---REK---DRFERENSTFFNQVRTAYLNRAAANP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 R I+DS+H +S I Sbjct: 178 KRYAIIDSSHDKESTKAQI 196 >gi|196233920|ref|ZP_03132757.1| dTMP kinase [Chthoniobacter flavus Ellin428] gi|196221969|gb|EDY16502.1| dTMP kinase [Chthoniobacter flavus Ellin428] Length = 218 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 118/224 (52%), Gaps = 7/224 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59 M G+F+SFEG EG GK+T I LL L+ + V +TREPGGT E RH+L S Sbjct: 1 MPRGIFVSFEGSEGCGKSTQIRLLADRLKALGHQVILTREPGGTEIGEQLRHLLQFSKAG 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E E ++FAA+R V VI PAL G I+L DRFLDS+ YQG + + Sbjct: 61 HAMASETELLLFAASRAQLVREVIAPALEAGAIVLADRFLDSTTVYQGVARKLDPAEVAA 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +V + +PD T + DL D+ + R + R+ + D E + E R +L Sbjct: 121 INRFAVGDTLPDITFVFDL--DLAIARERMRHRPAPAGAPDRMESQPAAFFEAVRAGYLA 178 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +AR R ++D+A + + ++ N +W+ + R+SPL K Sbjct: 179 LARENTTRVRLLDAAGTVEDLS----NRIWQELAPRLSPLPVTK 218 >gi|298530498|ref|ZP_07017900.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1] gi|298509872|gb|EFI33776.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1] Length = 223 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 124/213 (58%), Gaps = 7/213 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T L+ +L+ Y V VT EPGG+ R +LLS D+ Sbjct: 1 MFITFEGIEGCGKSTQTEFLRDYLEGLGYSVLVTLEPGGSRLGVELRRMLLSLESDDLTR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV VIRPAL G+I++ DRF S+ AYQG + + +D+LQE++ Sbjct: 61 EAELFLYLADRAQHVHQVIRPALEAGRIVISDRFTHSTLAYQG---YGREMGVDALQEMN 117 Query: 125 VQEV---MPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQIFLDI 180 + V +PD T +LDLP + GL+R R + ++ FE + + H + RQ +L++ Sbjct: 118 IMAVDGTVPDITFLLDLPPETGLRRALGRNMEKNLTSSEGRFEAEALEFHVRVRQGYLEL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A + ++ ++D+ ++V ++ V E+++ Sbjct: 178 ASRKKEKIVVLDAQALPETVFQGVVGKVNEIMK 210 >gi|315605270|ref|ZP_07880316.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313087|gb|EFU61158.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310] Length = 268 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/222 (33%), Positives = 123/222 (55%), Gaps = 9/222 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG +G+GK+T I ++ + + +V VTREPGGT R L+ G ++ Sbjct: 7 GVFITFEGGDGSGKSTQILAVRDWFASRGREVVVTREPGGTELGAEIRR-LVQNGPEDVD 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AA R HV V+ PAL G ++L DR++DSS AYQG S + SL Sbjct: 66 ARTEALLYAADRAYHVTTVVAPALERGAVVLGDRYIDSSLAYQGAARSLGVDEISSLSAW 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + P T +LDLP ++GL+R + D ER+ + HE+ R +L +A Sbjct: 126 ATRGLYPSLTFLLDLPPEVGLRRHTD--------APDRMERESMDFHERVRHEYLRLADA 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 +PDR ++D+ + + V + I ++ E + V+ + D+ Sbjct: 178 EPDRIVVIDAVGTVEEVFSEIRGVLVERFEGGVATIDEAADV 219 >gi|300172669|ref|YP_003771834.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811] gi|299887047|emb|CBL91015.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811] Length = 214 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 126/220 (57%), Gaps = 13/220 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ + +L L+ D + TREPGG P +EA R +L Sbjct: 1 MTKPLFITFEGPEGAGKTSVLEILISELKPLLGDELITTREPGGNPISEAIRAILQPAED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ +I PAL GK+++ DR++DSS AYQG + L +D+ Sbjct: 61 NGMDERTEALLYTAARRQHLVEIILPALKSGKVVISDRYIDSSLAYQG---GGRGLGVDN 117 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175 + +I + + +MPD TI D+P ++GL RV+ NR +D +++++ H+ RQ Sbjct: 118 IWQINQFATEGLMPDLTIYFDVPPELGLARVKANR-----QGKIDRLDKENLSFHQTVRQ 172 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L + + DR I+D+A S V + ++ + ++ R Sbjct: 173 TYLQLQHDFSDRIKIIDAAQSLDQVVADTRELLLKTLKTR 212 >gi|319638548|ref|ZP_07993310.1| thymidylate kinase [Neisseria mucosa C102] gi|317400297|gb|EFV80956.1| thymidylate kinase [Neisseria mucosa C102] Length = 208 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 115/199 (57%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ + Sbjct: 5 FITLDGIDGAGKSTNLAVMKAWFEKHKLPVLFTREPGGTPAGEALREILLNPAT-QVSLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 64 TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R+++L A QP Sbjct: 124 GDFRPDLTLLLDVPLEVSMARINQ---TREK---DRFEQEAAEFFNRVREVYLQRAAKQP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++DS S +V T I Sbjct: 178 ERYAVIDSGQSLDAVKTQI 196 >gi|72163182|ref|YP_290839.1| thymidylate kinase [Thermobifida fusca YX] gi|71916914|gb|AAZ56816.1| thymidylate kinase [Thermobifida fusca YX] Length = 686 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 7/201 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+ EG EG+GK+T + + +L+ + +DV TREPG T R +LL + Sbjct: 465 GLFVVLEGGEGSGKSTQVREIAVWLRDEGFDVLTTREPGATKLGMRLRTMLLDKANEGMA 524 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AA R +HV+ VIRPAL G I++ DR++DS+ AYQG + ++ Sbjct: 525 ARTEALLYAADRAEHVDKVIRPALERGAIVISDRYVDSTLAYQGAGRELDPDDVATINNW 584 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD TI+LD+P + GL+R +R + D E +++ HE+ R+ FL++A Sbjct: 585 ATGRLVPDLTILLDIPAEEGLRRHADRPA-------DRLESENLEFHERVRRCFLELADR 637 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 PDR ++D+ + + I Sbjct: 638 APDRYLVLDAREPQEEITKAI 658 >gi|16804730|ref|NP_466215.1| thymidylate kinase [Listeria monocytogenes EGD-e] gi|224502896|ref|ZP_03671203.1| thymidylate kinase [Listeria monocytogenes FSL R2-561] gi|255028105|ref|ZP_05300056.1| thymidylate kinase [Listeria monocytogenes LO28] gi|284800421|ref|YP_003412286.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578] gi|284993607|ref|YP_003415375.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923] gi|23821785|sp|Q8Y3Y6|KTHY_LISMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|16412193|emb|CAD00906.1| lmo2693 [Listeria monocytogenes EGD-e] gi|284055983|gb|ADB66924.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578] gi|284059074|gb|ADB70013.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923] Length = 208 Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD + L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + + Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERFMRVDATKTPEEITETIL 200 >gi|225849733|ref|YP_002729967.1| thymidylate kinase [Persephonella marina EX-H1] gi|225646361|gb|ACO04547.1| thymidylate kinase [Persephonella marina EX-H1] Length = 216 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 120/205 (58%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEGAGK+T +L +L + + +TREPGGT + R +LL+ + F Sbjct: 12 GFFITFEGIEGAGKSTQSKMLYEYLIKNGKNAVLTREPGGTDLGKKIREILLNPSKEIFP 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ A R HV N+I+P L G ++ DRF DS+ AYQG ++ L +I Sbjct: 72 PVAELMLYEADRNIHVHNIIKPYLNRGFYVISDRFTDSTLAYQGYARGIDIELVERLNDI 131 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + PD T I+D+PV+ G+KR+ +RY RE D E++ V H++ R+ FL IA+ Sbjct: 132 ASEGIKPDITFIIDIPVEEGMKRI-HRY--REK---DRIEQEGVDFHKRLREGFLRIAQK 185 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + +R ++D + + IL I+ Sbjct: 186 ERERVVLLDGRKDKEIIFNEILEIL 210 >gi|467418|dbj|BAA05264.1| unknown [Bacillus subtilis] Length = 212 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 + EA+++AAAR H+ ++PAL +G I+LCDRF+DS AYQG ++ L +D S Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSPLAYQG---YARGLGIDEVLS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E ++ ++MP T+ + + GLKR+ S RE LD E+ D H K ++ + + Sbjct: 119 INEFAIGDMMPHVTVYFSIDPEEGLKRIYANGS-REKNRLD-LEKLD--FHTKVQEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P+R H VD+ S V ++L ++ E ++K Sbjct: 175 LMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209 >gi|77411409|ref|ZP_00787756.1| thymidylate kinase [Streptococcus agalactiae CJB111] gi|77162582|gb|EAO73546.1| thymidylate kinase [Streptococcus agalactiae CJB111] Length = 211 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVVPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P ++GL+R+Q RE LD E+ D +H++ RQ +L+ Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ-REINRLD-LEQLD--MHQRVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A +P+R +D++ V +I+ + + + Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211 >gi|315283971|ref|ZP_07871975.1| thymidylate kinase [Listeria marthii FSL S4-120] gi|313612387|gb|EFR86525.1| thymidylate kinase [Listeria marthii FSL S4-120] Length = 208 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ G +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITXXGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + + + Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVIKM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 PDR VD+ + + + IL Sbjct: 179 FPDRFMRVDATKTPEEITETIL 200 >gi|323706279|ref|ZP_08117845.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534331|gb|EGB24116.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11] Length = 205 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+FEGI+G+GKTT I+LLK++L D+ V REPGGT E R +LL + Sbjct: 1 MYKGKLITFEGIDGSGKTTQINLLKKYLLEIGRDIVVLREPGGTAIGEKIREILLDKK-N 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA+R + V+ VI P+L +GKI++ DRF+DSS YQG ++ + Sbjct: 60 NIVPSAEALLYAASRAELVKEVIIPSLNDGKIVILDRFVDSSIVYQGYARGLGVEVVEEI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I++ ++PD T+ LD+ L R+ R D E +D HEK + ++ + Sbjct: 120 NSIAIDGLVPDLTVYLDIKPKDTLMRIDRR------KDKDRLEIEDAEFHEKVYEGYMKL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++P R IVD+ H + I++ V +++ Sbjct: 174 IKSKPGRYFIVDATHDIYYIQKVIIDEVSKII 205 >gi|225075646|ref|ZP_03718845.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens NRL30031/H210] gi|224953068|gb|EEG34277.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens NRL30031/H210] Length = 208 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ + Sbjct: 5 FITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QVSLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 64 TETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + RV RE D FE++ + R+++L A QP Sbjct: 124 GDFRPDLTLLLDVPLEVSMARVNQ---TREK---DRFEQEKAEFFNRVREVYLQRANEQP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS+ S +V I ++ Sbjct: 178 ERYAVIDSSQSLDAVKNQIETVL 200 >gi|217966109|ref|YP_002351787.1| thymidylate kinase [Listeria monocytogenes HCC23] gi|254808300|sp|B8DAU8|KTHY_LISMH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|217335379|gb|ACK41173.1| thymidylate kinase [Listeria monocytogenes HCC23] gi|307572281|emb|CAR85460.1| tmk [Listeria monocytogenes L99] Length = 208 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAVGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + + Sbjct: 123 AIEDTLPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERFMRVDATKTPEEITETIL 200 >gi|160914736|ref|ZP_02076950.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991] gi|158433276|gb|EDP11565.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991] Length = 210 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 6/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+FEG +G+GKTT L L+ Y V TREPGG AE RH++L Sbjct: 1 MKKGLFITFEGNDGSGKTTISMLAYESLKAAGYPVIYTREPGGIDIAEQIRHIILDPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AA+R H+ + PAL + +I+LCDRFLDSS AYQG + + Sbjct: 61 AMDGRCEALLYAASRRQHLVEKVLPALEKKQIVLCDRFLDSSLAYQGVARGIGVDEVYGI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ MPD TI LD+ +++GL RV +R LD +++ + H+ + + + Sbjct: 121 NEFAIEGCMPDATIYLDVSLEVGLARVASR------GNLDRMDQESMDFHQAVAKGYAIV 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R HIV++ + V + L ++ E+VQ V Sbjct: 175 REKFAKRMHIVNADQEVEKVLADTLKVLEEIVQPYV 210 >gi|269128739|ref|YP_003302109.1| thymidylate kinase [Thermomonospora curvata DSM 43183] gi|268313697|gb|ACZ00072.1| thymidylate kinase [Thermomonospora curvata DSM 43183] Length = 671 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 122/225 (54%), Gaps = 16/225 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG EGAGKTT L +L+ YDV T EPG T R +LL Sbjct: 451 GVFIAFEGGEGAGKTTQARLTAIWLRDHGYDVVTTNEPGATKVGMRLRAILLDKETTGLS 510 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AE +++AA R +HV NVI+PAL G I++ DR++DSS AYQG + L ++ + E+ Sbjct: 511 ARAETLLYAADRANHVANVIKPALERGAIVVSDRYVDSSLAYQG---YGRELPVEEIAEV 567 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T++LDLP GL R + ES LD+ HE+ R+ F + Sbjct: 568 NRWATDGLQPDLTVLLDLPPQTGLGRFASPADRMESEPLDF--------HERVRRGFRKL 619 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 A PDR ++D+ + ++ I + + +++ + P S +DI Sbjct: 620 AEADPDRYLVLDATRPQEELSRQIRDRLRQILPDPIPP--STEDI 662 >gi|167747824|ref|ZP_02419951.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662] gi|317473408|ref|ZP_07932702.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA] gi|167653186|gb|EDR97315.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662] gi|316899058|gb|EFV21078.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA] Length = 216 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 12/204 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EG +GAGK+T I LL+ +L +K YD+ V REPGGT +EA R V+L+ G Sbjct: 7 GIFITMEGPDGAGKSTQIDLLRVYLLQKGYDIIVCREPGGTVISEAIREVILNRDYKNMG 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR VE VI+PAL +GK+++CDRF++SS YQG ++ L +D + E+ Sbjct: 67 HMTELLLYAAARAQLVEEVIQPALDQGKVVICDRFIESSAVYQG---IARGLGVDLVYEV 123 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V MPD T++LD+ + G+ R ++ A LD E + + H K + + + Sbjct: 124 NRFAVGNTMPDITLLLDVDAETGIGRK------KQQAELDRMESEKLEFHRKVVEGYRLL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A +R +D +S + + I Sbjct: 178 AERDKNRMVKIDGRNSIEEIHRQI 201 >gi|308235275|ref|ZP_07666012.1| thymidylate kinase [Gardnerella vaginalis ATCC 14018] gi|311114155|ref|YP_003985376.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019] gi|310945649|gb|ADP38353.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019] Length = 233 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 78/194 (40%), Positives = 110/194 (56%), Gaps = 12/194 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +N GLFISFEGI+G GKTT + L+ FLQ + +V VTREPGGTP E R++LL G Sbjct: 13 LNKGLFISFEGIDGVGKTTQVEALRDFLQARGLEVVVTREPGGTPLGEQLRNILLHGGA- 71 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119 A EA++FAA R H +I PAL G +++ DR++DSS AYQ G R+ + D Sbjct: 72 -ISARTEALLFAADRAQHAAQIIIPALRRGAVVITDRYIDSSLAYQSGGRELTMQDVRD- 129 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + P+ T +LD+ R+ + ESA LD+ R R+ FLD Sbjct: 130 LSEWASNCLWPNRTYLLDMSEKDAAVRLHGQADRMESAGLDFARRT--------REAFLD 181 Query: 180 IARNQPDRCHIVDS 193 +A+ R ++D+ Sbjct: 182 LAKQNAQRFCVLDA 195 >gi|300087976|ref|YP_003758498.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527709|gb|ADJ26177.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 207 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 11/213 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T LL L +TREPGGTP E +L + Sbjct: 1 MKQGKFITFEGCEGAGKSTQAGLLAGMLASNGMKTILTREPGGTPLGEEISRLLKWGKIG 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +E ++F A+R + V VI PAL GKI++CDRF DSS YQG + + Sbjct: 61 DIDALSELLLFNASRAELVFTVIEPALKAGKIVICDRFTDSSLVYQGGGRGLSTETVIRV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ + + PD TI+LD+P+ G R N + D FE++ H+ RQ +L + Sbjct: 121 NDIATRGLKPDMTILLDIPISTGQHRKSNSVA-------DRFEQEADEFHKSVRQSYLAL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A P+R +V+ S + + VW+ V+ Sbjct: 174 AEADPERWKVVNGTLS----RSEVTEAVWKHVK 202 >gi|313606342|gb|EFR83276.1| thymidylate kinase [Listeria monocytogenes FSL F2-208] Length = 208 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD + L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +P+ T LD+P ++GL R+ RE LD ++D+ HEK + + + Sbjct: 123 AIEDTLPNRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQAGYEKVINM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERFMRVDATKTPEEITETIL 200 >gi|183602882|ref|ZP_02964242.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019] gi|219682707|ref|YP_002469090.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011] gi|241190283|ref|YP_002967677.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195689|ref|YP_002969244.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183217883|gb|EDT88534.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019] gi|219620357|gb|ACL28514.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011] gi|240248675|gb|ACS45615.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250243|gb|ACS47182.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178000|gb|ADC85246.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis BB-12] gi|295793270|gb|ADG32805.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis V9] Length = 206 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 82/217 (37%), Positives = 121/217 (55%), Gaps = 15/217 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFISFEG++GAGKTT ++LL +L+ +V VTREPGGT R +LL+ D Sbjct: 1 MGAGLFISFEGVDGAGKTTQVNLLADYLRALGREVVVTREPGGTALGTQIRAMLLTTNPD 60 Query: 61 -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA++FAA R HV VIRPAL G +++ DR+LDSS AYQ + L D Sbjct: 61 EEISPRTEALLFAADRAQHVSEVIRPALERGAVVITDRYLDSSLAYQS---GGRELTADD 117 Query: 120 LQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ +S+ ++P T +LD+ R+++ ESA D+ +R R Sbjct: 118 IRTLSMWATNNLLPARTYLLDIDPRASHTRLEHAEDRMESAGDDFQQRT--------RTA 169 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 FL++A QP R ++D+ S +A I + V L++ Sbjct: 170 FLELAAVQPQRFCVIDAQQSVGEIAALICDDVANLLE 206 >gi|297543636|ref|YP_003675938.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841411|gb|ADH59927.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 204 Score = 132 bits (333), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 8/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I LK +L +K Y++ V REPGGT E R +LL + Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLDK-YNFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PA+ EGKI+L DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPAIKEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R + D ER+ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLERESWDFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R +D V +I++ V Sbjct: 174 EYPKRFVFIDGMQEIVKVHQDIIDAV 199 >gi|237748461|ref|ZP_04578941.1| thymidylate kinase [Oxalobacter formigenes OXCC13] gi|229379823|gb|EEO29914.1| thymidylate kinase [Oxalobacter formigenes OXCC13] Length = 207 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 9/210 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG FI+FEGI+GAGK+THI + L+ N V VTREPGGT E R +LL D+ Sbjct: 6 HSGRFITFEGIDGAGKSTHIQFVTDLLRADNRQVVVTREPGGTVLGEKLREMLLH---DK 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ AAR +H+ VI PAL G ++ DRF D+S+AYQG + L+ Sbjct: 63 MNLETEALLMFAARREHIAEVIEPALQRGDWVISDRFTDASFAYQGGGRGLDLHKMRQLE 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD T++ D+ ++ R L + D FER+ + R +L A Sbjct: 123 EWVHPHLQPDLTLLFDVSPEVAQAR------LEAARSPDKFEREKSGFFNRVRDEYLRRA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + PDR ++DS+ S +++ I ++ EL Sbjct: 177 KEFPDRFRVIDSSRSIEAIRETIKGLIGEL 206 >gi|256827342|ref|YP_003151301.1| thymidylate kinase [Cryptobacterium curtum DSM 15641] gi|256583485|gb|ACU94619.1| thymidylate kinase [Cryptobacterium curtum DSM 15641] Length = 295 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/209 (38%), Positives = 108/209 (51%), Gaps = 4/209 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG +GAGK+THI L R L++ Y V REPGGT A EA R V+L + Sbjct: 59 GAFITFEGGDGAGKSTHIKFLARALEQCGYSVVRLREPGGTQAGEALRQVVLDPSYEGLS 118 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE+E +++ AAR V+ VI PAL GKI+LCDRF DS+ AYQ F+ Sbjct: 119 AESELLIYEAARAQLVKEVIAPALAAGKIVLCDRFCDSTIAYQAYGRGLSRDFVQEANLF 178 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q + PD T+++ P R Q + R D E V H + R+ F IA + Sbjct: 179 ACQGIKPDRTVLIKAPTSA---RKQLERATRAQG-PDRIELAGVEFHTRVREAFDAIAAS 234 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR +V SA A + V + V Sbjct: 235 DPDRVRVVVSASRKSETARLVFAAVADCV 263 >gi|34499178|ref|NP_903393.1| thymidylate kinase [Chromobacterium violaceum ATCC 12472] gi|46576426|sp|Q7NRQ7|KTHY_CHRVO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|34105029|gb|AAQ61385.1| dTMP kinase [Chromobacterium violaceum ATCC 12472] Length = 212 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 7/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+ EGI+GAGK+TH+S ++ +L R D TREPGGTP +E R +LL G Sbjct: 5 VRRGRFITLEGIDGAGKSTHLSFIRDWLARHGVDAAFTREPGGTPLSEKIRDLLLDPGTV 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +AEA++ AAR H+ VI PAL G+ L+ DRF DS+YA+QG + +L Sbjct: 65 A-SLDAEALLAFAARQQHIAEVIEPALAAGRWLVSDRFTDSTYAFQGGGRGVPFERIRAL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + + PD T++ DLP ++ R+ + D FE++ H + R +L Sbjct: 124 EDWVQRGLQPDLTLLFDLPTEVAAGRMAG------TRVPDRFEQEAADFHRRVRAAYLRR 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 A P R ++D++ + +I+ Sbjct: 178 AEEAPQRIAVLDASRGIADIQADIV 202 >gi|257869781|ref|ZP_05649434.1| thymidylate kinase [Enterococcus gallinarum EG2] gi|257803945|gb|EEV32767.1| thymidylate kinase [Enterococcus gallinarum EG2] Length = 215 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 111/209 (53%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLFI+ EG +GAGKT+ + L R D+ TREPGG AE R ++L E Sbjct: 2 SGLFITIEGPDGAGKTSVLEELYPRLQLEAKRDIVKTREPGGVKIAEKIRRIILDPKNSE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ VI PAL EGKI++CDRF+DSS AYQG + + Sbjct: 62 MDERTEALLYAAARRQHLIQVILPALNEGKIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R+Q + LD + + + H++ R +L +A Sbjct: 122 EFATEGTEPDFTLYLDVDSDTGLRRIQE----HRAHQLDRLDAEGLEFHQRVRHAYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R H VD+ Q V + + E Sbjct: 178 EENPVRIHKVDARMGLQDVVETSFSAIVE 206 >gi|184154763|ref|YP_001843103.1| thymidylate kinase [Lactobacillus fermentum IFO 3956] gi|227514030|ref|ZP_03944079.1| dTMP kinase [Lactobacillus fermentum ATCC 14931] gi|260663208|ref|ZP_05864100.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN] gi|238692945|sp|B2GAE1|KTHY_LACF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|183226107|dbj|BAG26623.1| thymidylate kinase [Lactobacillus fermentum IFO 3956] gi|227087616|gb|EEI22928.1| dTMP kinase [Lactobacillus fermentum ATCC 14931] gi|260552400|gb|EEX25451.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN] Length = 214 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 11/206 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FISFEG +GAGKT+ ++ ++ L + D V TREPGG P AE R VLL Sbjct: 2 SGRFISFEGPDGAGKTSVLTAIRTGLVNQLGDQVVYTREPGGNPIAEQVRAVLLDKQNGA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA+R HV ++PAL GK++LCDR+LDSS AYQG + L +D + Sbjct: 62 MDDWTEALLYAASRRQHVVETLKPALEAGKLILCDRYLDSSIAYQG---GGRELGIDRIW 118 Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ ++PD TI LDLPV+ GL R++ + ++ + + H + RQ +L Sbjct: 119 ELNQYAIDGLLPDLTIFLDLPVETGLARIEK----GRAETINRLDEQTTNFHRRVRQAYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 +A P+R V++ V ++ Sbjct: 175 TLAERFPERIVKVNADQELARVIEDV 200 >gi|317153459|ref|YP_004121507.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2] gi|316943710|gb|ADU62761.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2] Length = 213 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GKTT I+ LK + + + VH+TREPGG+ R +LL + Sbjct: 1 MFITFEGIEGTGKTTQIARLKEYFESRGRAVHLTREPGGSRVGRELRQMLLHVDNADLTP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A R HV VIRP L G+++LCDRF DS+ YQG L L E++ Sbjct: 61 ITELFLYLADRAQHVAQVIRPQLEAGRVVLCDRFADSTIVYQGFGRGLDTAILKQLNEVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182 V V PD TI+LD+ ++GLKR R +L + + FE + + H + R+ +L A Sbjct: 121 VDGVWPDLTIVLDIDPEVGLKRATLR-NLDDGKAKEEGRFEAEHISFHRRIREGYLTWAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 DR + D++ + V + ++ Sbjct: 180 LNRDRIRVADASATPDEVFARVKALI 205 >gi|313636002|gb|EFS01921.1| thymidylate kinase [Listeria seeligeri FSL S4-171] Length = 208 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 115/202 (56%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT ++L + ++ D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + I Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDISYHEKVQAGYEKIMAM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERYMRVDATKTPEEITDVIL 200 >gi|304405877|ref|ZP_07387535.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9] gi|304345120|gb|EFM10956.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9] Length = 211 Score = 132 bits (332), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EGAGKTT IS L L V +TREPGG P AE R V+L Sbjct: 1 MEQGVFITIEGGEGAGKTTIISRLAAELSALGDTVTITREPGGIPIAEQIRAVILDRNHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H+ + PAL +G ++LCDRF+DSS AYQG + ++ Sbjct: 61 GMDGRTEALLYAAARRQHLVEKVVPALEKGHVVLCDRFIDSSLAYQGHARGIGMEAVLAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +MP T+ LD+ ++GL+R+Q +RE ++ + + + HE+ R+ FL + Sbjct: 121 NAFAIDGMMPKLTLYLDVRPEVGLRRIQE-AEVRE---INRIDLEAITFHEQVREGFLQL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ DR ++D+ S +V ++I+ + Sbjct: 177 AQMYSDRIVVIDAEQSADAVFEQCMSIILK 206 >gi|313664899|ref|YP_004046770.1| dTMP kinase [Mycoplasma leachii PG50] gi|312949571|gb|ADR24167.1| dTMP kinase [Mycoplasma leachii PG50] Length = 213 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 122/216 (56%), Gaps = 7/216 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKNMDV 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG + ++ +Q+I Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ D+ KR+Q LR + + + ++ +K Q +L++ +N Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQ----LRGESSKNRLDEEENNFKQKVYQGYLELIKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217 P+R ++D+ V + I+ E + +KR S Sbjct: 177 PERIKVIDANKDIDQVYNQAIKIILEKLKENEKRTS 212 >gi|262379436|ref|ZP_06072592.1| thymidylate kinase [Acinetobacter radioresistens SH164] gi|262298893|gb|EEY86806.1| thymidylate kinase [Acinetobacter radioresistens SH164] Length = 202 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 12/211 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++K ++ +TREPGGT AE R +LLS DE Sbjct: 1 MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTSLAEQIRALLLSVSHDEKMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121 + E ++ AAR H++ VI PAL GK +LCDRF D+S+AYQ G + L L + Sbjct: 61 DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLALLNQS 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +S MPD T+ LD PV++G+ R RE LD FE++ V EK R + + Sbjct: 121 FVS---RMPDITLWLDAPVELGMSRA------RERGALDRFEQEKVSFFEKVRAGYTRLW 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R +D+ + + V L + +L Sbjct: 172 QQHPERIKRLDATQAPEKVLEQALEQIGKLA 202 >gi|298244278|ref|ZP_06968084.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] gi|297551759|gb|EFH85624.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] Length = 217 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 116/217 (53%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+ ISFEG++GAGKTT ++LL+ +LQ + TREPGG+P R +LL+ Sbjct: 1 MERGVLISFEGLDGAGKTTQMNLLEAWLQSQGVSYLRTREPGGSPLGVEIRRLLLNRPDL 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA++F A R H VI PAL EGK+++ DR DSS AYQG ++ L Sbjct: 61 HISPLAEALLFQADRAQHFAEVILPALDEGKVIVSDRCFDSSIAYQGAARGVGEQLVEDL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-----ESACLDYFERKDVMIHEKRRQ 175 ++ Q PD TI+LDLP + +VQ R +L +F+R+ H R+ Sbjct: 121 SLLATQGHQPDLTIMLDLPPE----KVQQRTNLAVDQGGTRTEQSHFDRETETFHRTLRE 176 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 FL +AR P R ++D++ + + + I V L+ Sbjct: 177 AFLTLARRHPQRIKVLDASRTPEVIQREIQGHVERLL 213 >gi|289435959|ref|YP_003465831.1| hypothetical protein lse_2598 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172203|emb|CBH28749.1| tmk [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 208 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 6/202 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG +G+GKTT ++L + ++ D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNEEMDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD L + Sbjct: 64 KTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVL-QVNLY 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++++ +PD T LD+P ++GL R+ + + ++ +++D+ HEK + + I Sbjct: 123 AIEDTIPDRTYYLDVPAEVGLARI----AANKGREINRLDKEDISYHEKVQAGYEKIMAM 178 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P+R VD+ + + + IL Sbjct: 179 FPERYMRVDATKTPEEITDVIL 200 >gi|188996346|ref|YP_001930597.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|229621845|sp|B2V7X0|KTHY_SULSY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|188931413|gb|ACD66043.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 204 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 116/203 (57%), Gaps = 8/203 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIE +GKTT I+LL +L+ +V TREPGGT + R +LLS ++F Sbjct: 2 GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ + R H++++++P+L G I+L DR++DS+ AYQ + + L + Sbjct: 62 YIAELLLYESDRNIHIQSIVKPSLDAGYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P+ T ++D+PV+I LKR+ S D E +D+ H+K R+ FL IA N Sbjct: 122 ATDGLKPNLTFLIDIPVEISLKRL--------SESKDRIESEDIEFHKKLREGFLKIAEN 173 Query: 184 QPDRCHIVDSAHSFQSVATNILN 206 + R ++D + I++ Sbjct: 174 EKGRFVVIDGTMDIMEIHKIIVD 196 >gi|255262414|ref|ZP_05341756.1| thymidylate kinase [Thalassiobium sp. R2A62] gi|255104749|gb|EET47423.1| thymidylate kinase [Thalassiobium sp. R2A62] Length = 208 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 108/203 (53%), Gaps = 9/203 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+FEGI+G+GK+T +L + R +TREPGG+ AE R +LLS D Sbjct: 3 DHGHFITFEGIDGSGKSTQARML---VDRLGAQTLLTREPGGSEGAEEIRGLLLSGDTDR 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I PAL G ++ DRF DS+ YQG +D L Sbjct: 60 WSAETEILLFTAARRDHLEKTIEPALAAGTTVISDRFADSTRVYQGATRGDLRATVDQLH 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T I+D+ I LKR L D FE + E R FL +A Sbjct: 120 TLMIGR-EPDLTFIIDMDPAIALKR-----GLARETGEDRFEDFGLAFQETLRHGFLALA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 R+ P+RC ++D + + VA+ + Sbjct: 174 RDMPNRCVVIDGNRTPEQVASEV 196 >gi|56418559|ref|YP_145877.1| thymidylate kinase [Geobacillus kaustophilus HTA426] gi|261417524|ref|YP_003251206.1| thymidylate kinase [Geobacillus sp. Y412MC61] gi|297528399|ref|YP_003669674.1| thymidylate kinase [Geobacillus sp. C56-T3] gi|319765181|ref|YP_004130682.1| thymidylate kinase [Geobacillus sp. Y412MC52] gi|73920820|sp|Q5L3W9|KTHY_GEOKA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56378401|dbj|BAD74309.1| thymidylate kinase [Geobacillus kaustophilus HTA426] gi|261373981|gb|ACX76724.1| thymidylate kinase [Geobacillus sp. Y412MC61] gi|297251651|gb|ADI25097.1| thymidylate kinase [Geobacillus sp. C56-T3] gi|317110047|gb|ADU92539.1| thymidylate kinase [Geobacillus sp. Y412MC52] Length = 214 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 80/198 (40%), Positives = 111/198 (56%), Gaps = 4/198 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F SFEG EGAGKTT IS L+ L+ + DV TREPGG AEA R ++L+ E Sbjct: 6 NGCFFSFEGPEGAGKTTMISKLESLLRERGIDVVATREPGGVRIAEAIRSIILNRDYTEM 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + + E Sbjct: 66 DGRTEALLYAAARRQHLLEKIVPALEAGCVVLCDRFVDSSLAYQGFARGLGIEEVWKINE 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ MP TI D+ IGL+R++ R RE LD + + HEK R+ + ++AR Sbjct: 126 FAIDGYMPSLTIYFDIDPQIGLERIR-RNRGREVNRLDL---ETLSFHEKVREGYRELAR 181 Query: 183 NQPDRCHIVDSAHSFQSV 200 DR ++D+ V Sbjct: 182 RFADRIVVIDANRPLDDV 199 >gi|126652958|ref|ZP_01725100.1| thymidylate kinase [Bacillus sp. B14905] gi|126590288|gb|EAZ84410.1| thymidylate kinase [Bacillus sp. B14905] Length = 215 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 123/216 (56%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S LFI+FEG EGAGKTT I + L N DV TREPGG AE R ++L+ Sbjct: 7 MKSNLFITFEGPEGAGKTTVIQKIAERLAEINIDVLATREPGGIEIAEKIRTIILNPAHT 66 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 EA+++AAAR H ++PAL GK+++CDRF+DSS AYQG ++ + +D Sbjct: 67 AMDERTEALLYAAARSQHYFEKVQPALDAGKLVICDRFIDSSLAYQG---YARGIGIDEV 123 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ E ++ + +PD TI+ D+ ++GL R+ + RE LD + + H+K + + Sbjct: 124 LSINEFAIGKKLPDMTILFDIAPEVGLARIYATGN-REVNRLDV---ESLPFHQKVHEGY 179 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 L + P+R IV++ SV ++ +++ + +Q Sbjct: 180 LLLVERYPERIRIVNADQDIDSVVEDVWSLLLDAIQ 215 >gi|296111513|ref|YP_003621895.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154] gi|295833045|gb|ADG40926.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154] Length = 214 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 124/220 (56%), Gaps = 13/220 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ ++ L+ F Q D+ TREPGG P +EA R +L Sbjct: 1 MTKPLFITFEGPEGAGKTSVLNQLVAEFQQTLGDDLISTREPGGNPISEAIRAILQPEED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ + PAL GK+++ DR++DSS AYQG + L +D Sbjct: 61 NGMDDRTEALLYTAARRQHLVETVLPALKAGKVVISDRYVDSSLAYQG---GGRGLGVDH 117 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175 + +I ++ ++PD TI DLP ++GL RV+ NR +D +++ + H+K R+ Sbjct: 118 IWQINQFAIDGLLPDLTIYFDLPSELGLARVKANR-----QGKIDRLDKESLAFHQKVRK 172 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++ DR IVD+ S +V ++ E ++ R Sbjct: 173 TYLELQVKFSDRIKIVDATQSLDNVVDATRQLILERMKYR 212 >gi|167038531|ref|YP_001666109.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038727|ref|YP_001661712.1| dTMP kinase [Thermoanaerobacter sp. X514] gi|256751401|ref|ZP_05492280.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300913688|ref|ZP_07131005.1| thymidylate kinase [Thermoanaerobacter sp. X561] gi|307723297|ref|YP_003903048.1| thymidylate kinase [Thermoanaerobacter sp. X513] gi|320116927|ref|YP_004187086.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687559|sp|B0K119|KTHY_THEPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687643|sp|B0K7K7|KTHY_THEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166852967|gb|ABY91376.1| dTMP kinase [Thermoanaerobacter sp. X514] gi|166857365|gb|ABY95773.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749783|gb|EEU62808.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300890373|gb|EFK85518.1| thymidylate kinase [Thermoanaerobacter sp. X561] gi|307580358|gb|ADN53757.1| thymidylate kinase [Thermoanaerobacter sp. X513] gi|319930018|gb|ADV80703.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 203 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 8/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I L+ +L ++ Y++ V REPGGT E R +LL + Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PA+ EGKI+L DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKVVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R + D ER+ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLERESWDFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R +D V +I+++V Sbjct: 174 EFPKRFVFIDGMQELMKVHKDIIDVV 199 >gi|320159579|ref|YP_004172803.1| thymidylate kinase [Anaerolinea thermophila UNI-1] gi|319993432|dbj|BAJ62203.1| thymidylate kinase [Anaerolinea thermophila UNI-1] Length = 205 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 113/200 (56%), Gaps = 6/200 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG+GKTT I L FL+ + YDV TREPGGT ++ R VL++ Sbjct: 1 MFITFEGPEGSGKTTQIRLFAEFLRARGYDVLTTREPGGTEISDQIRAVLVNLRNTAMHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F AAR VE VIRPAL G ++L DR+ DS+ AYQG L L + + Sbjct: 61 RTEILLFQAARAQLVEQVIRPALSRGTLVLSDRYADSTLAYQGYGHGYPLEELRRLIDFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +LD+ GL+R Q E LD + D+ H++ R +L++AR + Sbjct: 121 TGGLIPDLTFLLDVNPAQGLERKQRE---GEWNRLDAY---DLGFHQRVRAGYLEMARAE 174 Query: 185 PDRCHIVDSAHSFQSVATNI 204 P R +VD+ S + + ++I Sbjct: 175 PHRWVVVDATQSIEVIQSDI 194 >gi|148259980|ref|YP_001234107.1| dTMP kinase [Acidiphilium cryptum JF-5] gi|326403065|ref|YP_004283146.1| thymidylate kinase [Acidiphilium multivorum AIU301] gi|146401661|gb|ABQ30188.1| thymidylate kinase [Acidiphilium cryptum JF-5] gi|325049926|dbj|BAJ80264.1| thymidylate kinase [Acidiphilium multivorum AIU301] Length = 210 Score = 132 bits (331), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EG EGAGK+T I+ L L+ ++V TREPGGTP AEA R ++L F Sbjct: 5 GVFITLEGGEGAGKSTQIARLAARLRAAGHEVLTTREPGGTPGAEAIRALMLDP-ARHFA 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+ ++ AAR DHV +IRPAL G ++LCDRF DS+ AYQG + +L Sbjct: 64 PLADTLLVFAARADHVAAIIRPALEHGAVVLCDRFTDSTMAYQGHGLGVDRAAIATLG-- 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T+ILDLP I R+ +R D +E+ D + F IA Sbjct: 122 AMIGATPDLTLILDLPDAIARARLAHR-----GGAADRYEQFDTGFAIRVADGFRAIAAA 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +PDRC +VD+A + V + ++ Sbjct: 177 EPDRCVLVDAAGGIEDVTETLAGLI 201 >gi|325982933|ref|YP_004295335.1| thymidylate kinase [Nitrosomonas sp. AL212] gi|325532452|gb|ADZ27173.1| thymidylate kinase [Nitrosomonas sp. AL212] Length = 208 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 119/215 (55%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G F++ EGI+GAGK+T + + LQR VTREPGGT E R +LL + Sbjct: 1 MKQGKFLTLEGIDGAGKSTQLVWIAELLQRAGLSAVVTREPGGTLLGEQLRALLLDKFI- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GER--DSSQHLFL 117 E EA++ AAR +H++ VI PAL +G+ ++ DRF D+S+AYQ G R DS++ + L Sbjct: 60 SMHPETEALLMFAARREHLDKVIFPALAQGQWVISDRFTDASFAYQSGGRGLDSAKLVIL 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + ++Q PD T+ D+P D+G +RV +D FE++ + R + Sbjct: 120 EQWVQGALQ---PDLTLYFDVPADVGQQRVSR------GGVVDRFEQEQADFFLRVRAAY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD A+ PDR I+DS S V + I+ L+ Sbjct: 171 LDRAQQFPDRIKIIDSNRSLPEVKVAVEQILQPLL 205 >gi|89898307|ref|YP_515417.1| thymidylate kinase [Chlamydophila felis Fe/C-56] gi|123483364|sp|Q254L6|KTHY_CHLFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|89331679|dbj|BAE81272.1| thymidylate kinase [Chlamydophila felis Fe/C-56] Length = 207 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + V TREPGG+P E R+ +L+ + Sbjct: 1 MFIVIEGCEGSGKSSLTELLKNRLITEGKSVIATREPGGSPLGEQVRNWILNPSLPGISP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 E +F A+R H+ I PAL GKI++CDRF DS+ YQG + ++ +L Sbjct: 61 YTELFLFLASRAQHITEKIIPALESGKIVICDRFHDSTIVYQGIAEGLGKEYVTNLCHHV 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ +PD T +LD+PVD G+KR Q + S LD FE K ++ H K R+ FL +A Sbjct: 121 VGEKKFLPDLTCLLDIPVDTGIKRKQQQKS------LDKFEDKPLVYHNKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+ I+D ++ ++ EL Sbjct: 175 ANPENYLILDGRQPLEASLNKVMTAYTEL 203 >gi|161831009|ref|YP_001596429.1| thymidylate kinase [Coxiella burnetii RSA 331] gi|164686003|ref|ZP_01946518.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177'] gi|165919105|ref|ZP_02219191.1| thymidylate kinase [Coxiella burnetii RSA 334] gi|161762876|gb|ABX78518.1| thymidylate kinase [Coxiella burnetii RSA 331] gi|164601531|gb|EAX32890.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177'] gi|165917174|gb|EDR35778.1| thymidylate kinase [Coxiella burnetii RSA 334] Length = 223 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 8/220 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEGIEG GKTT ++ ++ L VTREPGGTP AEA R VLLS + Sbjct: 6 GRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMMC 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 66 PDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGW 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L +A Sbjct: 126 VLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQ 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++ + +V I+ + L+ SPL +K Sbjct: 180 EPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217 >gi|154706615|ref|YP_001424915.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111] gi|154355901|gb|ABS77363.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111] Length = 223 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 8/220 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEGIEG GKTT ++ ++ L VTREPGGTP AEA R VLLS + Sbjct: 6 GRFISFEGIEGVGKTTALNWVREQLDATRIPYVVTREPGGTPIAEAIRDVLLSHSDEMMC 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 66 PDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGW 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L +A Sbjct: 126 VLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQ 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++ + +V I+ + L+ SPL +K Sbjct: 180 EPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217 >gi|309390261|gb|ADO78141.1| thymidylate kinase [Halanaerobium praevalens DSM 2228] Length = 208 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 120/208 (57%), Gaps = 5/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGIEG+GKTT I+ L +L++ +DV ++REPGGT + R +LL D Sbjct: 1 MAEGFFITFEGIEGSGKTTQINRLADYLRKNEHDVLISREPGGTELGQKIRKILLDPHFD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++AA R HV+ I+PAL GKI++ DRF+DS+ AYQ + + + Sbjct: 61 TMDYKTEILLYAADRAQHVKEKIKPALKAGKIVISDRFVDSNLAYQAAGRGLDYEQVYQI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T ILD+ + GL+R + + S ++ D ER+ H++ R+ +L++ Sbjct: 121 NNWVIGSTWPDLTFILDIDIKKGLERAR-KLSFDQAG--DRLEREVDDFHQRVREAYLEM 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +R ++++A S + +I NI+ Sbjct: 178 A--VAERFCLINAARSIVEIEKDIKNII 203 >gi|42560606|ref|NP_975057.1| thymidylate kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|59798304|sp|Q6MUI5|KTHY_MYCMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|42492102|emb|CAE76699.1| THYMIDYLATE KINASE [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320609|gb|ADK69252.1| dTMP kinase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 213 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 7/216 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTTLLKVKEELERLNYQVLITREPGGEAIAEQIRQIILDNKNRDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG + ++ +Q+I Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ D+ KR+Q +R + + + +K Q +L++ +N Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQ----IRGENSKNRLDEEKSDFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV---QKRVS 217 P R ++D+ V + I+ E + +KR S Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKENEKRTS 212 >gi|254468768|ref|ZP_05082174.1| thymidylate kinase [beta proteobacterium KB13] gi|207087578|gb|EDZ64861.1| thymidylate kinase [beta proteobacterium KB13] Length = 201 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 10/208 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EGI+GAGK+TH+ ++ +L +KN +TREPGGT E R +LL D+ Sbjct: 4 FITVEGIDGAGKSTHLEFIQSYLNKKNIQNKLTREPGGTEIGEKLRQLLLH---DDMDVG 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR +H+ VI+PAL ++CDRF D+SYAYQ F+ SL+E+ Sbjct: 61 TETMMMFAARHEHLITVIQPALQSNISIICDRFTDASYAYQQGGKGIDKSFVKSLEELVH 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T + DL D R+ N + LD FE++ R+++L++A+ Sbjct: 121 PNLTPDLTFLFDLDPDTAHSRISNERN------LDKFEKQSSTFFNGVRKVYLELAKAHS 174 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 R H++DS+ + + I + ELV+ Sbjct: 175 -RFHVIDSSQTIDQIQQVISKKLDELVK 201 >gi|311896975|dbj|BAJ29383.1| putative thymidylate kinase [Kitasatospora setae KM-6054] Length = 1055 Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats. Identities = 75/201 (37%), Positives = 112/201 (55%), Gaps = 8/201 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG +GAGK+T L +++ K ++V +TREPGG+P + R ++L G Sbjct: 516 GYFIALEGGDGAGKSTQAQALAEWIRAKGHEVVLTREPGGSPIGQRLRALVLDVGNTGLS 575 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R +HVENVIRPAL G ++L DR++DSS AYQG + + Sbjct: 576 HRAEALIYAADRAEHVENVIRPALERGAVVLTDRYMDSSIAYQGAGRDLAATEVARISRW 635 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD T++LD VD R +R+ + LD E + H++ R FL +A Sbjct: 636 ATGGLVPDLTVVLD--VDPTAAR--DRF----TEALDRLESEPTEFHQRVRSGFLALAAA 687 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 P R +VD S +V T I Sbjct: 688 DPARYLVVDGTQSAAAVTTAI 708 >gi|293605096|ref|ZP_06687488.1| dTMP kinase [Achromobacter piechaudii ATCC 43553] gi|292816499|gb|EFF75588.1| dTMP kinase [Achromobacter piechaudii ATCC 43553] Length = 207 Score = 131 bits (330), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 113/205 (55%), Gaps = 14/205 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+ EG++GAGK+TH + FL+ +V TREPGGTP E R ++L+ D+ Sbjct: 3 SRGRFITLEGVDGAGKSTHTDWIADFLRSNGREVVSTREPGGTPLGEKLRALVLT---DQ 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--S 119 G + E ++ AAR +HV VI PAL G ++CDR+ D++YAYQG + L + + Sbjct: 60 MGLDTETLLMFAARCEHVRQVIEPALARGAWVVCDRYTDATYAYQG---GGRELGAERVA 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E + PD T + D+P+++ R+ + RE D FER+ E+ R + Sbjct: 117 VLERWMHAGQPDRTWLFDVPLEVARARLAD---AREP---DRFEREGAAFFERTRTAYHA 170 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 A+ P R HI+DS S + T + Sbjct: 171 RAKADPGRIHIIDSTQSIAQIRTEL 195 >gi|315037614|ref|YP_004031182.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112] gi|325956093|ref|YP_004286703.1| thymidylate kinase [Lactobacillus acidophilus 30SC] gi|312275747|gb|ADQ58387.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112] gi|325332658|gb|ADZ06566.1| thymidylate kinase [Lactobacillus acidophilus 30SC] Length = 212 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCG 58 +G F+SFEG +GAGK+T +LK L + + VTREPGG+ AE R ++L Sbjct: 2 TGYFVSFEGPDGAGKST---VLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPA 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ A+ EA+++AAAR HVE +I+PAL GKI+ DRF+DSS AYQGE + Sbjct: 59 NDKMDAKTEALLYAAARSQHVEEIIKPALEAGKIVFSDRFVDSSLAYQGEGRDLGIKEVK 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + ++ PD T +D+ +IGL R+Q +E D E++++ H+K Q FL Sbjct: 119 QINDFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHKKVYQGFL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P+R +D V ++ + + Sbjct: 175 KVRAMYPERFVTIDGTQPIDQVVDQVITTLKQ 206 >gi|253680847|ref|ZP_04861650.1| dTMP kinase [Clostridium botulinum D str. 1873] gi|253562696|gb|EES92142.1| dTMP kinase [Clostridium botulinum D str. 1873] Length = 210 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 119/209 (56%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EG+GKTT + +++ +L+ N D TREPGG +E R ++L Sbjct: 1 MKKGVFITLEGPEGSGKTTIVKMIEGYLKENNIDYISTREPGGINISEQIREIILDRKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 E A EA+++ A+R H+ + PAL GKI++CDRF+DSS AYQG ++ + +D Sbjct: 61 EMDARTEALLYVASRRQHLSERVIPALKSGKIVICDRFIDSSLAYQG---YARGIGIDEV 117 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ E ++ MP+ T+ LD+ +IGLKR+ RE LD E+ D H+K R+ + Sbjct: 118 MSINEFAIDGYMPNLTLYLDIDPEIGLKRISEN-DKREVNRLD-LEKLD--FHKKVREGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILN 206 + + P+R +++ V ++ N Sbjct: 174 FKVLKKFPNRIKKINANQPIDKVFEDVKN 202 >gi|326202926|ref|ZP_08192793.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] gi|325987003|gb|EGD47832.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] Length = 206 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT I L++ FL+ DV ++REPGGT +E R+++L G Sbjct: 1 MCKGLFITVEGTDGSGKTTQIKLMEEFLKAAGNDVVLSREPGGTEISETIRNLILDPGNK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++AAAR HV VIRP+L GK ++CDRF+DSSYAYQG + + Sbjct: 61 DISPLTEMLLYAAARAQHVFQVIRPSLESGKCVICDRFVDSSYAYQGCGRGVDLKTVADV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V V+PD T L++ + ++R +S D E++ + H + + + + Sbjct: 121 NRAAVDGVVPDITFFLNIDPRLAIER------RIKSTGADRIEQEKMDFHMRVYEGYRKM 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A PDR +D++ S + ++ I + E++ Sbjct: 175 ALLYPDRIKSIDASKSIEEISLQIKTYLKEIL 206 >gi|309378939|emb|CBX22392.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 208 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 119/199 (59%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPAT-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P ++ + R+ +RE D FE+++ ++ RQ++L A QP Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ---MREK---DRFEQEEAGFFKRVRQVYLQRAGRQP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D + S ++V I Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196 >gi|226941613|ref|YP_002796687.1| thymidylate kinase [Laribacter hongkongensis HLHK9] gi|226716540|gb|ACO75678.1| KthY [Laribacter hongkongensis HLHK9] Length = 214 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 114/197 (57%), Gaps = 7/197 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EGI+GAGK+TH+ ++ +L + ++ VTREPGGTP E+ R +LL + Sbjct: 8 GLFLTLEGIDGAGKSTHVGFVRDYLTARGINLVVTREPGGTPVGESLRSLLLDV-QSQVS 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VIRPAL G +L DRF D++YA+QG + +L+ Sbjct: 67 LDTETLLMFAARQAHLDAVIRPALARGDWVLSDRFTDATYAFQGGGRGVPFARIATLENW 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 Q + PDCT + D+P+ R+Q +R+ LD FE++ H + R +L A + Sbjct: 127 VQQGLQPDCTFLFDVPLATAQARMQG---VRQ---LDRFEQEASDFHARVRDAYLRRAAD 180 Query: 184 QPDRCHIVDSAHSFQSV 200 +P R ++D+ S ++ Sbjct: 181 EPQRFCLLDARQSIGAL 197 >gi|308388855|gb|ADO31175.1| putative thymidylate kinase [Neisseria meningitidis alpha710] gi|325129800|gb|EGC52608.1| thymidylate kinase [Neisseria meningitidis OX99.30304] gi|325135738|gb|EGC58350.1| thymidylate kinase [Neisseria meningitidis M0579] gi|325197890|gb|ADY93346.1| thymidylate kinase [Neisseria meningitidis G2136] gi|325202534|gb|ADY97988.1| thymidylate kinase [Neisseria meningitidis M01-240149] gi|325207716|gb|ADZ03168.1| thymidylate kinase [Neisseria meningitidis NZ-05/33] Length = 206 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ +S D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIG------QSREKDRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R I+DS S V NI ++ Sbjct: 178 ERYAIIDSNRSLDEVRNNIEKVL 200 >gi|258542239|ref|YP_003187672.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01] gi|256633317|dbj|BAH99292.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01] gi|256636376|dbj|BAI02345.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-03] gi|256639429|dbj|BAI05391.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-07] gi|256642485|dbj|BAI08440.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-22] gi|256645540|dbj|BAI11488.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-26] gi|256648593|dbj|BAI14534.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-32] gi|256651646|dbj|BAI17580.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654637|dbj|BAI20564.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-12] Length = 214 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 113/209 (54%), Gaps = 9/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EG GK+T + LLK L+ + V TREPGG+ AE R +LL G + Sbjct: 1 MACGMFITLEGAEGVGKSTQLRLLKENLEAQGQKVLTTREPGGSAGAEDLRQLLL-FGKN 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119 A AE + AAR DHV+ VI PAL G+I+LCDRF DS+ AYQG R + L Sbjct: 60 PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTMAYQGYGRANGDPAILSL 119 Query: 120 LQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ + Q + PD T +L P I +R+ R A D +E+ D H + F Sbjct: 120 IETLQKQLGLQPDVTFLLQAPRAISRQRLAAR-----GAPTDRYEQADEDFHARLADGFA 174 Query: 179 DIARNQPDRCHIVD-SAHSFQSVATNILN 206 IA+ +P R +VD S +S + V IL Sbjct: 175 HIAKAEPQRVVVVDTSVYSAEQVNAQILK 203 >gi|46576522|sp|Q83E35|KTHY_COXBU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 227 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 118/220 (53%), Gaps = 8/220 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEGIEG GKTT ++ ++ L VTREPGGTP AEA R VLLS + Sbjct: 10 GRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMMC 69 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 70 PDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGW 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L +A Sbjct: 130 VLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQ 183 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++ + +V I+ + L+ SPL +K Sbjct: 184 EPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 221 >gi|255327688|ref|ZP_05368754.1| dTMP kinase [Rothia mucilaginosa ATCC 25296] gi|255295362|gb|EET74713.1| dTMP kinase [Rothia mucilaginosa ATCC 25296] Length = 238 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 79/223 (35%), Positives = 116/223 (52%), Gaps = 9/223 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI EG +GAGKTT ++LL L+ + Y V TREPGGT E R ++L G Sbjct: 22 GLFIVVEGGDGAGKTTQLALLDEALRGRGYRVITTREPGGTEIGEKLRALVLEAGQGTID 81 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 EA++FAA+R H +IRPAL EG I+L DR++DSS AYQG RD +D L Sbjct: 82 DRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGVETIVD-LSR 140 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++L +P+ +R+ R +D E + + F IAR Sbjct: 141 WATANLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGTAFKARIHGAFEQIAR 194 Query: 183 NQPDRCH-IVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + H I+D + + V +L ++ L+ R + K+D Sbjct: 195 EDANGSHRIIDGVGTIEQVHARVLEVIEPLLALRELVRTGKED 237 >gi|319779570|ref|YP_004130483.1| Thymidylate kinase [Taylorella equigenitalis MCE9] gi|317109594|gb|ADU92340.1| Thymidylate kinase [Taylorella equigenitalis MCE9] Length = 204 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 76/198 (38%), Positives = 116/198 (58%), Gaps = 11/198 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EGI+GAGK++HI + F + +V VTREPGG +EA R +LL+ ++ Sbjct: 3 GYFITLEGIDGAGKSSHIEYIVDFFESLGREVVVTREPGGNALSEALRGILLTQPMNSL- 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQE 122 E ++ A+R + V +I PAL EGKI++ DRF DS+ AYQG RD S + ++ L+ Sbjct: 62 --TEVLLMFASRSESVYGIILPALREGKIVISDRFTDSTLAYQGGGRDFSIDV-INDLKN 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ PD T++ D+P+++ R+ N S+ D FE D + R +L +A Sbjct: 119 IVHPDLTPDLTLLFDVPLEVARDRLSNGRSV------DKFEVLDEDFFNRVRNQYLSMAN 172 Query: 183 NQPDRCHIVDSAHSFQSV 200 +PDR I+DS+HS V Sbjct: 173 YEPDRIKIIDSSHSVTVV 190 >gi|84516820|ref|ZP_01004178.1| thymidylate kinase [Loktanella vestfoldensis SKA53] gi|84509288|gb|EAQ05747.1| thymidylate kinase [Loktanella vestfoldensis SKA53] Length = 202 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 6/204 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+FEGI+G+GK+T L ++L + +DV +TREPGG+ AE R +LL+ D Sbjct: 1 MTRPRFITFEGIDGSGKSTQARRLAQWLGDQGHDVILTREPGGSQGAEEIRQLLLTGDTD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E I PAL GK ++ DRF DS+ YQG +D+L Sbjct: 61 RWSAETEILLFTAARRDHLEKTILPALAAGKTVVSDRFADSTRVYQGATRGDLRAKVDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T ++D+ L+R R S D FE + E R FL + Sbjct: 121 HALMIGR-EPDLTFVIDMDPATALERGLARRS-----GEDRFEDFGLPFQETLRHGFLAL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 AR + RC ++D + +A+++ Sbjct: 175 ARAEAQRCVLIDGNRTPDQIASDV 198 >gi|152980260|ref|YP_001353676.1| thymidylate kinase [Janthinobacterium sp. Marseille] gi|166221747|sp|A6SZH9|KTHY_JANMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|151280337|gb|ABR88747.1| thymidylate kinase (dTMP kinase) [Janthinobacterium sp. Marseille] Length = 204 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEGI+GAGK+TH+S + L + V VTREPGGT E R +LL + Sbjct: 1 MTTGKFITFEGIDGAGKSTHLSFVAELLCERKKTVVVTREPGGTSLGEELREILLH---E 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG L++L Sbjct: 58 KMHLETEALLMFAARREHIAQVIAPALERGDWVISDRFTDATFAYQGGGRKLDRAKLNAL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + P T++ D+P+D+ R L + LD FE++ R +L Sbjct: 118 EQWVHPHLQPHLTLLFDVPLDVA------RARLDATRTLDKFEQEKAEFFAATRAEYLRR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R H++DS S ++ + IV Sbjct: 172 AAEFPQRFHVIDSTRSIAAIQEQLRAIV 199 >gi|260551489|ref|ZP_05825673.1| thymidylate kinase [Acinetobacter sp. RUH2624] gi|260405483|gb|EEW98976.1| thymidylate kinase [Acinetobacter sp. RUH2624] Length = 199 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 78/207 (37%), Positives = 116/207 (56%), Gaps = 12/207 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALASNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +++P+R +D+ S + V L + Sbjct: 172 KSEPERIKRLDATQSPEQVFEQALQYL 198 >gi|327182908|gb|AEA31355.1| thymidylate kinase [Lactobacillus amylovorus GRL 1118] Length = 212 Score = 131 bits (329), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCG 58 +G F+SFEG +GAGK+T +LK L + + VTREPGG+ AE R ++L Sbjct: 2 TGYFVSFEGPDGAGKST---VLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPA 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ A+ EA+++AAAR HVE +I+PAL GKI+ DRF+DSS AYQGE + Sbjct: 59 NDKMDAKTEALLYAAARSQHVEEIIKPALTAGKIVFSDRFVDSSLAYQGEGRDLGIKEVK 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + ++ PD T +D+ +IGL R+Q +E D E++++ H K Q FL Sbjct: 119 QINDFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHTKVYQGFL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNIL 205 + P+R +D V ++ Sbjct: 175 KVRAMYPERFVTIDGTQPIDQVVDQVI 201 >gi|262047567|ref|ZP_06020522.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US] gi|293379956|ref|ZP_06626057.1| thymidylate kinase [Lactobacillus crispatus 214-1] gi|312977918|ref|ZP_07789664.1| dTMP kinase [Lactobacillus crispatus CTV-05] gi|260572143|gb|EEX28708.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US] gi|290923469|gb|EFE00371.1| thymidylate kinase [Lactobacillus crispatus 214-1] gi|310895225|gb|EFQ44293.1| dTMP kinase [Lactobacillus crispatus CTV-05] Length = 212 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 123/214 (57%), Gaps = 17/214 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59 G F+SFEG +GAGK+T +LK L + ++ VTREPGG+ AE R ++L Sbjct: 3 GYFVSFEGPDGAGKST---VLKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPAN 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + + L + Sbjct: 60 DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 116 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++I + ++ PD T LDL ++GLKR++ +E D E++++ H+K Sbjct: 117 VKQINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 FL + P+R VD+ V ++ I+ + Sbjct: 173 FLKVKEMYPERFVTVDATQPIDQVVAQVIAILKQ 206 >gi|282889968|ref|ZP_06298503.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500161|gb|EFB42445.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 222 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 79/198 (39%), Positives = 114/198 (57%), Gaps = 12/198 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI+FEG EGAGKTT I ++ L++ YDV TREPGG+ R LL Sbjct: 12 FITFEGGEGAGKTTLIQQVEADLKQLGYDVVSTREPGGSSLGNTIRQWLLQQNTKTSISI 71 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F AAR H+E +I P+L +GKI+LCDRF DS+ AYQG ++ L L+++Q + Sbjct: 72 KAELLLFLAARAQHIEELILPSLTKGKIVLCDRFNDSTIAYQG---VARGLGLEAVQNLC 128 Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQIFL 178 V+PD TI LD+ +GL R R++ +E A +D E + + HE RQ F Sbjct: 129 KFVCGNVVPDLTIYLDIDPHVGLTR--TRHAAKEDAPMGSIDRIESEKLEFHEHVRQGFF 186 Query: 179 DIARNQPDRCHIVDSAHS 196 + P R H++D++ S Sbjct: 187 KLIHQNPSRYHVIDASMS 204 >gi|227877632|ref|ZP_03995685.1| thymidylate kinase [Lactobacillus crispatus JV-V01] gi|256849085|ref|ZP_05554518.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US] gi|227862780|gb|EEJ70246.1| thymidylate kinase [Lactobacillus crispatus JV-V01] gi|256713861|gb|EEU28849.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US] Length = 216 Score = 131 bits (329), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 122/212 (57%), Gaps = 17/212 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59 G F+SFEG +GAGK+T +LK L + ++ VTREPGG+ AE R ++L Sbjct: 7 GYFVSFEGPDGAGKST---VLKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPAN 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + + L + Sbjct: 64 DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 120 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++I + ++ PD T LDL ++GLKR++ +E D E++++ H+K Sbjct: 121 VKQINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 176 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 FL + P+R VD+ V ++ I+ Sbjct: 177 FLKVKEMYPERFVTVDATQPIDQVVAQVIAIL 208 >gi|210630412|ref|ZP_03296447.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279] gi|210160494|gb|EEA91465.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279] Length = 225 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 109/206 (52%), Gaps = 6/206 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EGI+G GK+T +L++ L YDV REPGG +E R VLL D Sbjct: 1 MTKGHFITVEGIDGVGKSTQAALMEVLLDSAGYDVLRLREPGGVSISEQIRAVLLDPAND 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E G E +++ AAR V VIRPAL GK ++CDRF DS+ AYQ D + Sbjct: 61 EMGDMCELLLYEAARAQLVHQVIRPALTAGKTVICDRFYDSTTAYQSFADGLDRDMVFQA 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++V PD T++ DLPV+ +R +R + D E K ++ + F + Sbjct: 121 NELAVDGCRPDLTLVFDLPVEDAHRRRSDR------SAEDRLELKGRDFQQRVSEGFRAV 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 A ++PDR +VD+ S V + +++ Sbjct: 175 AADEPDRVRLVDAGGSIAEVFSIVVD 200 >gi|294787169|ref|ZP_06752422.1| dTMP kinase [Parascardovia denticolens F0305] gi|315227293|ref|ZP_07869080.1| thymidylate kinase [Parascardovia denticolens DSM 10105] gi|294484525|gb|EFG32160.1| dTMP kinase [Parascardovia denticolens F0305] gi|315119743|gb|EFT82876.1| thymidylate kinase [Parascardovia denticolens DSM 10105] Length = 226 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 10/218 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEG++G GK+T + L+ +L + V VTREPGGTP E R +LL G DE Sbjct: 3 GFFISFEGVDGVGKSTQVKRLEAYLLEQGRSVLVTREPGGTPLGERIRQILLH-GEDE-A 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AA+R HV IRPAL G +++ DR++DSS AYQ + L Sbjct: 61 PRTEALLYAASRAQHVAQKIRPALDSGALVISDRYIDSSLAYQAGGRELTLADVRRLNSW 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ PD T +LD+ +R+Q ES+ +F+R RQ FL +A Sbjct: 121 ATGDLWPDRTYLLDMSFQQSRQRLQGEPDRLESSGGAFFDRA--------RQAFLALAEG 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 +PDR ++D++ V I L+ SPL+S Sbjct: 173 EPDRFRVIDASQPIDQVWQAIKTDADGLLAGLPSPLAS 210 >gi|300362307|ref|ZP_07058483.1| thymidylate kinase [Lactobacillus gasseri JV-V03] gi|300353298|gb|EFJ69170.1| thymidylate kinase [Lactobacillus gasseri JV-V03] Length = 213 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKTT I+ L+K+ + +TREPGG+ +E R ++L E Sbjct: 3 GYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG + L ++++++ Sbjct: 63 DDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQG---VGRDLGVEAVKQ 119 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ + PD TI LDL GL R++ + +E D E++ + H+K ++D Sbjct: 120 INDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHKKVYAGYID 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PDR VD+ + VA N + I+ Sbjct: 176 LLKRYPDRIKKVDANLPIEEVAANSVKII 204 >gi|119478164|ref|ZP_01618220.1| thymidylate kinase [marine gamma proteobacterium HTCC2143] gi|119448673|gb|EAW29917.1| thymidylate kinase [marine gamma proteobacterium HTCC2143] Length = 211 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 6/207 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EG GK+T+I+ + L N VTREPGGTP AE R +LLS + Sbjct: 1 MFITIEGGEGVGKSTNIAYIADQLSDANITCIVTREPGGTPLAEDIRQLLLSDRDEAIAD 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A+R H+ VI PAL G ++CDRF D++YAYQG + +L++ Sbjct: 61 NTELLLMFASRAQHIAGVIEPALARGDWVICDRFTDATYAYQGGGRGLSEAKIANLEQWV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +++ PD TI+ D P+ +G+ R R LD ER+ E R +L +A Sbjct: 121 QEDLRPDITILFDAPITVGMSRAGQRGE------LDRIERERAAFFENVRNCYLMLAERH 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 DR VD++ + V ++ I+ E+ Sbjct: 175 SDRFRTVDASETLGRVQASLQPIIAEM 201 >gi|299769149|ref|YP_003731175.1| thymidylate kinase [Acinetobacter sp. DR1] gi|298699237|gb|ADI89802.1| thymidylate kinase [Acinetobacter sp. DR1] Length = 199 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ + + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---TGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KAEPERIKRIDATQS 186 >gi|262278188|ref|ZP_06055973.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202] gi|262258539|gb|EEY77272.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202] Length = 199 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KAEPERIKRLDATRS 186 >gi|227496773|ref|ZP_03927046.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434] gi|226833726|gb|EEH66109.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434] Length = 265 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 111/215 (51%), Gaps = 8/215 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF+SFEG +G GKTT I L L+ D VTREPGGT R +LL G E Sbjct: 17 GPGLFLSFEGGDGVGKTTQIHRLSGLLEAAGVDCLVTREPGGTELGAEIRRLLLHGG--E 74 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A AEA+++AA R HV+ +RPAL G +++ DR+LDSS AYQG S + L Sbjct: 75 VSARAEALLYAADRAHHVQTRVRPALARGGVVITDRYLDSSVAYQGAARSLGSQEVRDLS 134 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + Q ++PD TI+LD I E A LD ER+ H R+ FL +A Sbjct: 135 LWATQGLLPDLTILLDAEPGI------AARRAGERAALDRLEREPSSFHVALREEFLALA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P R ++D+ + VA + V L++ R Sbjct: 189 AAEPGRFVVIDADRGVEEVAEQVTAAVVRLIRSRT 223 >gi|288554635|ref|YP_003426570.1| thymidylate kinase [Bacillus pseudofirmus OF4] gi|288545795|gb|ADC49678.1| thymidylate kinase [Bacillus pseudofirmus OF4] Length = 213 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 6/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+ EG EGAGKTT + +++ L+ +N V TREPGG AE R V+L Sbjct: 1 MKTGLFITVEGGEGAGKTTIVDKIEQDLRARNISVVRTREPGGIRIAERIREVILDVDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A EA+++AAAR H+ + PAL EG +++CDRF+DSS AYQG + ++ Sbjct: 61 EMDARTEALLYAAARRQHLIEKVLPALEEGNVVICDRFIDSSLAYQGHARGIGFNDVLAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM-IHEKRRQIFLD 179 E +++ PD T+ ++ ++GL R++ R RE LD ++V HEK ++ + Sbjct: 121 NEFAIEGNYPDLTLFFNIEPEVGLARIK-RSGTREVNRLD----QEVFDFHEKVKEGYEK 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + PDR ++++ +V ++ + ++ + ++K Sbjct: 176 VIAQYPDRMAVINADQEVDAVFSDAMAVINDFLKK 210 >gi|147676397|ref|YP_001210612.1| thymidylate kinase [Pelotomaculum thermopropionicum SI] gi|189030835|sp|A5D690|KTHY_PELTS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146272494|dbj|BAF58243.1| thymidylate kinase [Pelotomaculum thermopropionicum SI] Length = 216 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG++G+GKTT I LL L+ V TREPGGT E R +LL+ E Sbjct: 3 GKFIVFEGVDGSGKTTQIKLLGEKLESMGCPVVYTREPGGTRVGERIREILLNPLYGELV 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AAAR HV VI PAL EGK++LCDRF DSS AYQG L+ + Sbjct: 63 PWAEALLYAAARAQHVAQVILPALREGKVVLCDRFTDSSLAYQGYGRGVDIEMLEQVNRP 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V+PD ++LD + Q R D ER+ + + R +L +A Sbjct: 123 AAAGVVPDLVLVLDFD-----REGQTERMARSGRSADRIEREAQEFYRRVRSGYLALAAR 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D++ + + V ++L E++ Sbjct: 178 APRRYRVIDASRAEKLVHLDVLKAAEEVL 206 >gi|319654969|ref|ZP_08009043.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2] gi|317393394|gb|EFV74158.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2] Length = 208 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 118/203 (58%), Gaps = 10/203 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT I +L L ++ Y V TREPGG AE R V+L Sbjct: 1 MKKGKFITVEGPEGAGKTTIIDMLASNLAKEGYQVLQTREPGGIEIAEQIRSVILDKNNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 + EA+++AAAR H+ ++PA+ +G I+LCDRF+DSS AYQG ++ L +D Sbjct: 61 KMDPRTEALLYAAARRQHLAEKVKPAMDKGYIILCDRFIDSSLAYQG---YARGLGIDEV 117 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ +++ +MP+ T+ D+ + GL R+ N++ RE LD E+ D H K R+ + Sbjct: 118 YSINSFAIEGMMPELTLYFDIEPEAGLDRI-NQHKGREVNRLD-LEKLD--FHHKVREGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSV 200 L + P+R +D++ + + V Sbjct: 174 LKLMELYPERIFKIDASGTLEEV 196 >gi|320451196|ref|YP_004203292.1| thymidylate kinase [Thermus scotoductus SA-01] gi|320151365|gb|ADW22743.1| thymidylate kinase [Thermus scotoductus SA-01] Length = 199 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 113/205 (55%), Gaps = 19/205 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++ EG++G+GKTT LL +FL+ K V +TREPGG R +LL + Sbjct: 2 KGFFLTLEGLDGSGKTTQARLLAQFLEEKGIKVRLTREPGG--GLPGVRDLLLKG--EAL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++F+A R +HV VI PAL EG ++ DR+LDSS AYQG Q L L L+E Sbjct: 58 SPEAEYLLFSADRAEHVRKVILPALEEGFWVISDRYLDSSLAYQG---YGQGLPLPWLKE 114 Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ + + PD T +LDLP + LKRV + D ER + ++ RQ +L Sbjct: 115 VAKEATLGLKPDLTFLLDLPPEEALKRV---------SAPDRLERMGLPFFQRVRQGYLK 165 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A +P+R ++D+ + V I Sbjct: 166 LAAAEPERFRVLDATRPVEEVQAAI 190 >gi|317123732|ref|YP_004097844.1| thymidylate kinase [Intrasporangium calvum DSM 43043] gi|315587820|gb|ADU47117.1| thymidylate kinase [Intrasporangium calvum DSM 43043] Length = 223 Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 10/190 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF+ FEG +GAGK+T + LL L+R V VTR+PGGTP R ++L D Sbjct: 22 LFVCFEGGDGAGKSTQVRLLAAALERAGRQVLVTRQPGGTPLGAQIRELVLHG--DHVSP 79 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AEA++FAA + HV+ +IRPAL G++++ DR+ DSS AYQG + LQ + Sbjct: 80 RAEALLFAADKAHHVDELIRPALAGGRVVITDRYTDSSIAYQGAGRDLGADEIRQLQHWA 139 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V + PD T++LD+ D+G R + ES D+ H RQ FLD+A + Sbjct: 140 VGGLFPDLTVLLDVSPDVGRSRRGEVHDRLESEADDF--------HAAVRQGFLDLAARE 191 Query: 185 PDRCHIVDSA 194 PDR +VD+ Sbjct: 192 PDRYLVVDAG 201 >gi|310639487|ref|YP_003944245.1| thymidylate kinase [Paenibacillus polymyxa SC2] gi|309244437|gb|ADO54004.1| Thymidylate kinase [Paenibacillus polymyxa SC2] Length = 215 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 9/216 (4%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G+FI+ EG +G+GKTT I L ++++ + + V TREPGG +E R ++L Sbjct: 1 MNRKGIFITLEGGDGSGKTTMIQRLAKYMEEEGHPVVTTREPGGIEISEKIRSIILDPAH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AAAR H+ ++PA+ +G I+LCDRF+DSS YQG + S Sbjct: 61 TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +V + PD T LD+ ++GL R+ + +D + + + H K R+ +L+ Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARI----NASRGEEMDRLDMESISFHHKVREAYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +AR P+R IVD++ + + V ++ +L++KR Sbjct: 177 LARKFPERITIVDASPAPEQVE----QVLKDLLKKR 208 >gi|288941602|ref|YP_003443842.1| thymidylate kinase [Allochromatium vinosum DSM 180] gi|288896974|gb|ADC62810.1| thymidylate kinase [Allochromatium vinosum DSM 180] Length = 215 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 112/197 (56%), Gaps = 5/197 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EGIEGAGK+T I+ L L+ + +V TREPGG+ AE R +LL Sbjct: 5 GRFITLEGIEGAGKSTQIAPLAELLRARGLNVLTTREPGGSALAERLRALLLDPDNQGMS 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR DH++ IRPAL G +LCDRF D++YAYQG + L+++ Sbjct: 65 ETTELLLMFAARADHLDRCIRPALAAGGWVLCDRFTDATYAYQGGGRGIDPARIALLEDL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T++ DLP ++GL R ++R + D FE + E R ++L+ AR Sbjct: 125 VQGDLRPDLTLVFDLPPELGLGRAKSR-----AGQTDRFESETRRFFETARAVYLERARA 179 Query: 184 QPDRCHIVDSAHSFQSV 200 P+R ++D+ S ++V Sbjct: 180 NPERYRVIDATASLEAV 196 >gi|296128436|ref|YP_003635686.1| thymidylate kinase [Cellulomonas flavigena DSM 20109] gi|296020251|gb|ADG73487.1| thymidylate kinase [Cellulomonas flavigena DSM 20109] Length = 224 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 24/220 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+F+SFEG +G GK+T ++LL L +V VTREPGGTP R +L DE Sbjct: 15 AGVFVSFEGGDGVGKSTQVALLGHHLAALGREVVVTREPGGTPLGIELRRAVLHG--DEL 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV +++RPAL G ++L DR+LDSS AYQG S + L D ++ Sbjct: 73 DPRTEALLYAADRAHHVASLVRPALARGAVVLTDRYLDSSVAYQG---SGRGLGADEVER 129 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +S V E++P T++LDL +GL R+ ESA ++ H + R+ FL Sbjct: 130 LSLWAVDELLPHLTVLLDLDPVVGLARLTGDPDRLESAGDEF--------HRRTREAFLA 181 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 A P R ++D++ + VA V++R++PL Sbjct: 182 RAAADPARWLVLDASQPAEDVAAQ--------VRERLAPL 213 >gi|283458750|ref|YP_003363389.1| thymidylate kinase [Rothia mucilaginosa DY-18] gi|283134804|dbj|BAI65569.1| thymidylate kinase [Rothia mucilaginosa DY-18] Length = 239 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 111/214 (51%), Gaps = 9/214 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI EG +GAGKTT ++LL L + Y V TREPGGT E R ++L G Sbjct: 23 GLFIVVEGGDGAGKTTQLALLNEALSARGYRVITTREPGGTEIGEKLRALVLEAGQGTID 82 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 EA++FAA+R H +IRPAL EG I+L DR++DSS AYQG RD +D L Sbjct: 83 DRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGIETIVD-LSR 141 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +++PD T++L +P+ +R+ R +D E + + F IAR Sbjct: 142 WATADLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGAAFKARIHGAFEQIAR 195 Query: 183 NQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215 + H I+D + V +L ++ L+ R Sbjct: 196 EDANGSHRIIDGVGTIDEVHARVLEVIEPLLAAR 229 >gi|116333253|ref|YP_794780.1| thymidylate kinase [Lactobacillus brevis ATCC 367] gi|122270059|sp|Q03SS3|KTHY_LACBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116098600|gb|ABJ63749.1| thymidylate kinase [Lactobacillus brevis ATCC 367] Length = 214 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FISFEG +GAGKT+ + + ++ D + +TREPGG P +E+ R ++L Sbjct: 2 SGTFISFEGPDGAGKTSALQAITTQIKPVLGDQLVITREPGGNPISESIRAIILDRANTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL K++LCDR++DSS AYQG + + Sbjct: 62 MDYRTEALLYAAARRQHLAQTILPALAADKLVLCDRYVDSSVAYQGAGRQIGEDAVAQMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P T+ D+P +IGL+R+Q + R+ +D + + H++ R +L + Sbjct: 122 TFATDGLLPAVTVYFDVPAEIGLRRIQ---AHRDPQKVDRLDVEQAAFHDRVRAAYLRLQ 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 PDR ++D+ ++V T L ++ + Q Sbjct: 179 AAHPDRIKLIDATQKREAVVTTALTLIKQAAQ 210 >gi|23009766|ref|ZP_00050693.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1] Length = 137 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 65/130 (50%), Positives = 85/130 (65%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG EGAGK+T I+ L LQ +V TREPGGT AEA R LL FG Sbjct: 8 GVFITFEGGEGAGKSTQIARLATALQGSGREVVTTREPGGTERAEALRAALLRGVAKPFG 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++FAAAR+DH+E +IRPAL G ++LCDRF DS+ AYQG + SL+ + Sbjct: 68 PFAEALMFAAARIDHIETLIRPALARGAVVLCDRFADSTRAYQGAAGGLDPGLIASLERV 127 Query: 124 SVQEVMPDCT 133 +++ + PD T Sbjct: 128 TLEGLRPDLT 137 >gi|289577348|ref|YP_003475975.1| thymidylate kinase [Thermoanaerobacter italicus Ab9] gi|289527061|gb|ADD01413.1| thymidylate kinase [Thermoanaerobacter italicus Ab9] Length = 204 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 111/206 (53%), Gaps = 8/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I LK +L +K Y++ V REPGGT E R +LL + Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLDK-YNFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PA+ EGKI+L DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R + D ER+ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLERESWDFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R ++ V +I++ V Sbjct: 174 EYPKRFVFINGMQEIVKVHQDIIDAV 199 >gi|238853621|ref|ZP_04643990.1| dTMP kinase [Lactobacillus gasseri 202-4] gi|238833765|gb|EEQ26033.1| dTMP kinase [Lactobacillus gasseri 202-4] Length = 213 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 11/210 (5%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ L+K+ + +TREPGG+ +E R ++L E Sbjct: 2 KGYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG + L ++ ++ Sbjct: 62 MDDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQG---VGRDLGVEEVK 118 Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +I+ + PD TI LDL GL R++ + +E D E++ + H+K ++ Sbjct: 119 QINDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHKKVYAGYI 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D+ + PDR VD+ + VA N + I+ Sbjct: 175 DLLKRYPDRIKKVDANLPIEEVAANSVKII 204 >gi|282852748|ref|ZP_06262090.1| dTMP kinase [Lactobacillus gasseri 224-1] gi|282556490|gb|EFB62110.1| dTMP kinase [Lactobacillus gasseri 224-1] Length = 213 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKTT I+ L+K+ + +TREPGG+ +E R ++L E Sbjct: 3 GYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG ++L ++++++ Sbjct: 63 DDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQG---VGRNLGVEAVKQ 119 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ + PD TI LDL GL R++ + +E D E++ + H+K + D Sbjct: 120 INDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHQKVYAGYTD 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PDR VD+ + VA N + I+ Sbjct: 176 LLKRYPDRIKKVDANLPIKEVAANSVKII 204 >gi|154508479|ref|ZP_02044121.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC 17982] gi|153798113|gb|EDN80533.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC 17982] Length = 270 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 116/207 (56%), Gaps = 9/207 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG +G+GK+T I ++ + + + +V VTREPGGT R L+ G ++ Sbjct: 5 GVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRR-LVQNGPEDVD 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AA R HV VI PAL G ++L DR++DSS AYQG S + SL Sbjct: 64 ARTEALLYAADRAYHVATVIAPALERGAVVLADRYIDSSLAYQGAARSLGVDEIGSLSAW 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + P T +LDLP ++G +R + D ER+ + HE+ R +L +A Sbjct: 124 ATRGLYPSLTFLLDLPPEVGARRRTD--------APDRMERESMDFHERVRHEYLRLADA 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 +PDR ++D+ + V + I ++ E Sbjct: 176 EPDRIVVIDAVGTVDEVFSEIRGVLVE 202 >gi|256844526|ref|ZP_05550012.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN] gi|256613604|gb|EEU18807.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN] Length = 212 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 17/209 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59 G F+SFEG +GAGK+T +LK L + ++ VTREPGG+ AE R ++L Sbjct: 3 GYFVSFEGPDGAGKST---VLKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPAN 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + + L + Sbjct: 60 DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 116 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++I + ++ PD T LDL ++GLKR++ +E D E++++ H+K Sbjct: 117 VKQINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNIL 205 FL + P+R VD+ V ++ Sbjct: 173 FLKVKETYPERFVTVDATQPIDQVVAQVI 201 >gi|218885132|ref|YP_002434453.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226732655|sp|B8DN41|KTHY_DESVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218756086|gb|ACL06985.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 215 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 3/216 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG+EG+GK+T ++ +++ L + V +TREPGG+ R +LL D+ Sbjct: 1 MFITFEGMEGSGKSTALNRVQQVLLDAGHGVLLTREPGGSRLGRTLRSILLDLSNDDIVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV VIRPAL EG ++L DR+ DS+ YQG L L +++ Sbjct: 61 EAELFLYLADRAQHVGQVIRPALDEGVVVLSDRYADSTVVYQGYGRGLDPERLRELNDMA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182 V + PD T++ DLP + GL+R R +LRE + FE + + H + R+ +L A Sbjct: 121 VGGLWPDLTLVFDLPPEEGLRRAMTR-NLREGTSVSEGRFEAEHLAFHARVREGYLTWAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 P R +VD+ + V +++ V ++ P Sbjct: 180 LHPARFRVVDATRTPDEVFEDVMRAVRSVLSAPARP 215 >gi|295692244|ref|YP_003600854.1| thymidylate kinase [Lactobacillus crispatus ST1] gi|295030350|emb|CBL49829.1| Thymidylate kinase [Lactobacillus crispatus ST1] Length = 212 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 120/209 (57%), Gaps = 17/209 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGV 59 G F+SFEG +GAGK+T +LK L + ++ VTREPGG+ AE R ++L Sbjct: 3 GYFVSFEGPDGAGKST---VLKEVLNQIGSELKTQYLVTREPGGSKIAEKIRDIILDPAN 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + + L + Sbjct: 60 DKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQG---AGRDLGIQE 116 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++I + ++ PD T LDL ++GLKR++ +E D E++++ H+K Sbjct: 117 VKQINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAG 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNIL 205 FL + P+R VD+ V ++ Sbjct: 173 FLKVKETYPERFVTVDATQPIDQVVAQVI 201 >gi|329113408|ref|ZP_08242189.1| Thymidylate kinase [Acetobacter pomorum DM001] gi|326697233|gb|EGE48893.1| Thymidylate kinase [Acetobacter pomorum DM001] Length = 215 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 9/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EG GK+T + LLK L+ + V TREPGG+ AE R +LL G + Sbjct: 2 MACGMFITLEGAEGVGKSTQLRLLKEKLEAQGQKVLATREPGGSAGAEDLRQLLL-FGKN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A AE + AAR DHV+ VI PAL G+I+LCDRF DS+ AYQG ++ + SL Sbjct: 61 PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTLAYQGYGRANGDPAILSL 120 Query: 121 QEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 I ++ + PD T +L P + +R+ R A D +E+ D H + F Sbjct: 121 IAILQKQLGLQPDITFLLQAPRAVSRQRLAAR-----GAPTDRYEQADEAFHARLADGFA 175 Query: 179 DIARNQPDRCHIVD-SAHSFQSVATNILN 206 IA+ +P R +VD S +S + V IL Sbjct: 176 HIAQAEPQRVVVVDTSVYSAEQVNAQILK 204 >gi|254670330|emb|CBA05726.1| Thymidylate kinase [Neisseria meningitidis alpha153] Length = 206 Score = 130 bits (327), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R I+DS S V +I ++ Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200 >gi|257454679|ref|ZP_05619935.1| thymidylate kinase [Enhydrobacter aerosaccus SK60] gi|257447989|gb|EEV22976.1| thymidylate kinase [Enhydrobacter aerosaccus SK60] Length = 213 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/204 (39%), Positives = 109/204 (53%), Gaps = 10/204 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEG EG GK+T I+ L +L + D TREPGG+P AE R +LL + Sbjct: 13 FISFEGTEGVGKSTLIANLAAYLTAQGIDFIQTREPGGSPFAEQLRAMLLDPATT-MTED 71 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQEIS 124 +E ++ AAR DHV VI PAL +G+ +LCDRF DS+ AYQG R L ++ + Sbjct: 72 SELLLMFAARADHVAQVILPALAQGQWVLCDRFTDSTIAYQGFGRKQGDRAELSKIELLI 131 Query: 125 VQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V MPD TI LDLPV G+ R +NR LD FE+ + E+ Q F A+ Sbjct: 132 RHFVAKMPDMTIWLDLPVTEGMSRAKNR------GKLDRFEQNQLAFFERVHQGFAYQAQ 185 Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206 +P R +D+ + V +L Sbjct: 186 QEPQRVKRIDAQGTPDEVLAKVLT 209 >gi|271970386|ref|YP_003344582.1| dTMP kinase [Streptosporangium roseum DSM 43021] gi|270513561|gb|ACZ91839.1| dTMP kinase [Streptosporangium roseum DSM 43021] Length = 688 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG EG+GKTT LL +L+ + +DV TREPG T R +LL Sbjct: 468 GMFIAFEGGEGSGKTTQSRLLAIWLRDQGFDVVQTREPGSTKVGMRLRAILLDAVHQGLS 527 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +EA+++AA R +HVE VIRPAL G +++ DR++DSS AYQG + + + + Sbjct: 528 ARSEALLYAADRAEHVEKVIRPALYRGSMVISDRYVDSSLAYQGAGRALEPGDVARINAW 587 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD T+++D P +GL R+ D E + + HE+ R+ F +A Sbjct: 588 ATGGLVPDLTVLIDTPPSVGLTRL--------GGAADRIESEPLEFHERVRREFRSLAAA 639 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +VD + + ++ I + V E++ Sbjct: 640 APERYLVVDGTLAQEQISLLIHDRVREVL 668 >gi|295425167|ref|ZP_06817871.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664] gi|295065143|gb|EFG56047.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664] Length = 216 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FIS EG +GAGK++ + +L + N VTREPGG+ AE R ++L + Sbjct: 7 GYFISLEGPDGAGKSSVLEQVLNEIGPQLNTQYLVTREPGGSRIAEKIRQIILDPANVKM 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR HVE ++RPAL GK++ DRF+DSS AYQG + + L +D +++ Sbjct: 67 DDRTEALLYAAARSQHVEEIVRPALAAGKVVFSDRFVDSSLAYQG---AGRDLGIDQVKQ 123 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + PD T+ DL IGL R+Q +E D E++ + HEK + Sbjct: 124 INEFATGGIEPDLTLFFDLDPKIGLARIQKLRPDQE----DRLEQEKLAFHEKVYAGYQK 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 IAR PDR +D++ F V + I+ Sbjct: 180 IARQNPDRIVKIDASQPFDQVEAETIAII 208 >gi|262373085|ref|ZP_06066364.1| thymidylate kinase [Acinetobacter junii SH205] gi|262313110|gb|EEY94195.1| thymidylate kinase [Acinetobacter junii SH205] Length = 199 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 10/194 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKTT I + ++ +++ +V +TREPGGTP AE R +LL+ DE + Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRTLLLAVNHDELMS 60 Query: 65 -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 + E ++ AAR H++ VI PAL GKI+L DRF D+S+AYQ R SQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQCAGRGLSQEK-LQLLNQ 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + MP+ T LD P+++G+ R RE LD FE++ + K R + + + Sbjct: 120 TFVAK-MPNITFWLDAPIELGMTRA------RERGALDRFEQEKLSFFAKVRAGYKTLWQ 172 Query: 183 NQPDRCHIVDSAHS 196 +P+R +D+ + Sbjct: 173 AEPERIKRLDATQN 186 >gi|182420064|ref|ZP_02951298.1| thymidylate kinase [Clostridium butyricum 5521] gi|237666856|ref|ZP_04526841.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376101|gb|EDT73688.1| thymidylate kinase [Clostridium butyricum 5521] gi|237658055|gb|EEP55610.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 211 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI FEG EG GKTT I + ++Q K+ TREPGG +E R V+L Sbjct: 1 MKKGLFIVFEGGEGTGKTTAIESIYDWIQEKDLKCIKTREPGGIKISEEIRQVILDKDNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 + EA+++AAAR H+ + PAL EG ++LCDRF+DSS AYQG ++ L +D Sbjct: 61 KMDGRTEALLYAAARRQHLVEKVIPALNEGYVVLCDRFIDSSLAYQG---FARGLGIDEV 117 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ + ++ E MPD +I+ DL IGL+R+ RE LD E+ D HEK R+ + Sbjct: 118 MSINKFAIGEYMPDLSILFDLEPKIGLERISTS-GEREINRLD-LEKID--FHEKVREGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + R DR +++ S + V I I+ Sbjct: 174 NKVYRENRDRIVRINAEQSKEGVLKEIKKIL 204 >gi|116629043|ref|YP_814215.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323] gi|311111161|ref|ZP_07712558.1| dTMP kinase [Lactobacillus gasseri MV-22] gi|116094625|gb|ABJ59777.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323] gi|311066315|gb|EFQ46655.1| dTMP kinase [Lactobacillus gasseri MV-22] Length = 217 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKTT I+ L+K+ + +TREPGG+ +E R ++L E Sbjct: 7 GYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKEM 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG ++L ++++++ Sbjct: 67 DDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQG---VGRNLGVEAVKQ 123 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ + PD TI LDL GL R++ + +E D E++ + H+K + D Sbjct: 124 INDFGTGGLEPDLTIFLDLDPATGLARIEKERAGQE----DRLEQEKLAFHQKVYAGYTD 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PDR VD+ + VA N + I+ Sbjct: 180 LLKRYPDRIKKVDANLPIKEVAANSVKII 208 >gi|311065067|ref|YP_003971793.1| thymidylate kinase [Bifidobacterium bifidum PRL2010] gi|310867387|gb|ADP36756.1| Tmk Thymidylate kinase [Bifidobacterium bifidum PRL2010] Length = 250 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 23/213 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------- 55 +GLFISFEG++G GKTT + L+ +L+ +V VTREPGGT + R +LL Sbjct: 8 TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLRELGDAA 67 Query: 56 -SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + G D AEA++FAA R HV V+RPAL G +++ DR+LDSS AYQ + Sbjct: 68 EADGTD-IAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQA---GGRE 123 Query: 115 LFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L D ++ +S+ +MP T +LD+ +R+Q+ ESA ++ +R Sbjct: 124 LTADDVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQHDADRMESAGDEFQQRT------ 177 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 RQ FLD+A ++P R ++D+A ++V +I Sbjct: 178 --RQAFLDLAGHEPGRFRVIDAAWPIEAVWEHI 208 >gi|309792153|ref|ZP_07686625.1| dTMP kinase [Oscillochloris trichoides DG6] gi|308225694|gb|EFO79450.1| dTMP kinase [Oscillochloris trichoides DG6] Length = 230 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/226 (35%), Positives = 118/226 (52%), Gaps = 11/226 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG+GK+T LL LQ Y V +TREPGGT +E R +++ E Sbjct: 3 LFITFEGSEGSGKSTQARLLYERLQAVGYPVILTREPGGTRISELIRRIVMDLRHTEMAP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+AAR V +IRP L G I+LCDR+ DS++AYQG L ++ ++ Sbjct: 63 TTETLLFSAARAQLVSELIRPYLGTGGIVLCDRYADSTFAYQGYGLGRDLEELQAITTVA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRV--------QNRYSLRESACLDY--FERKDVMIHEKRR 174 + PD T LDLPV+ GL+R QN S +++ + +D+ H++ Sbjct: 123 TGGLQPDLTFYLDLPVEEGLRRKHLAKERAEQNAPGTTLSTPVEWNRLDARDLAYHQRVA 182 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 F D+ R +P R I+ + +A I V L+ KRV+ L Sbjct: 183 AGFADLIRKEPQRWRIIPAEQPIPILAEQIAQEVAPLL-KRVARLG 227 >gi|269214814|ref|ZP_06158844.1| dTMP kinase [Neisseria lactamica ATCC 23970] gi|269208972|gb|EEZ75427.1| dTMP kinase [Neisseria lactamica ATCC 23970] Length = 210 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 118/199 (59%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ + G Sbjct: 7 FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPAT-KAGLR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 66 AETMMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P ++ + R+ RE D FE+++ ++ RQ++L A QP Sbjct: 126 GGLKPDLTLLLDVPPEVSMARIGQ---TREK---DRFEQEEAGFFKRVRQVYLQRAGRQP 179 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D + S ++V I Sbjct: 180 ERYAVIDGSRSPEAVGHQI 198 >gi|224283541|ref|ZP_03646863.1| Thymidylate kinase [Bifidobacterium bifidum NCIMB 41171] gi|310288198|ref|YP_003939457.1| Thymidylate kinase [Bifidobacterium bifidum S17] gi|313140695|ref|ZP_07802888.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171] gi|309252135|gb|ADO53883.1| Thymidylate kinase [Bifidobacterium bifidum S17] gi|313133205|gb|EFR50822.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171] Length = 244 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 21/212 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 +GLFISFEG++G GKTT + L+ +L+ +V VTREPGGT + R +LL D Sbjct: 2 TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLREPGDAA 61 Query: 61 -----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + AEA++FAA R HV V+RPAL G +++ DR+LDSS AYQ + L Sbjct: 62 EADGADIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQA---GGREL 118 Query: 116 FLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 D ++ +S+ +MP T +LD+ +R+Q+ ESA ++ +R Sbjct: 119 TADDVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQHDADRMESAGDEFQQRT------- 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 RQ FLD+A ++P R ++D+A ++V +I Sbjct: 172 -RQAFLDLAGHEPGRFRVIDAAWPIEAVWEHI 202 >gi|83644968|ref|YP_433403.1| thymidylate kinase [Hahella chejuensis KCTC 2396] gi|123533767|sp|Q2SK46|KTHY_HAHCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|83633011|gb|ABC28978.1| thymidylate kinase [Hahella chejuensis KCTC 2396] Length = 208 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 111/204 (54%), Gaps = 6/204 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EGIEGAGKTT+++ ++ L+ +V +TREPGGTP AE R +LL + Sbjct: 1 MKKGLFITVEGIEGAGKTTNLNFIRSILEESGEEVVMTREPGGTPMAEEVRELLLRPREE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE ++ AAR H+E I+P + G +L DRF D++YAYQG + L Sbjct: 61 AVSSTAELLLMFAARAQHLEQKIKPTIERGVHVLSDRFTDATYAYQGGGRGLSWAMIQDL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ PD T++L + + G+ R + R LD FER+ + + ++ ++ Sbjct: 121 EKLVQAGFKPDLTLLLRIDPETGMARARKR------GALDRFEREKLEFYFCVQEGYMKR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 P+R +VD+ S + V I Sbjct: 175 VAEDPERFLVVDAQQSLEEVQAAI 198 >gi|313668856|ref|YP_004049140.1| thymidylate kinase [Neisseria lactamica ST-640] gi|313006318|emb|CBN87781.1| putative thymidylate kinase [Neisseria lactamica 020-06] Length = 208 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 118/199 (59%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPAT-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P ++ + R+ RE D FE+++ ++ RQ++L A QP Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ---TREK---DRFEQEEAGFFKRVRQVYLQRAGRQP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D + S ++V I Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196 >gi|52078523|ref|YP_077314.1| thymidylate kinase [Bacillus licheniformis ATCC 14580] gi|52783885|ref|YP_089714.1| thymidylate kinase [Bacillus licheniformis ATCC 14580] gi|319648552|ref|ZP_08002766.1| thymidylate kinase [Bacillus sp. BT1B_CT2] gi|81667281|sp|Q65PJ3|KTHY_BACLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52001734|gb|AAU21676.1| thymidylate kinase [Bacillus licheniformis ATCC 14580] gi|52346387|gb|AAU39021.1| Tmk [Bacillus licheniformis ATCC 14580] gi|317389319|gb|EFV70132.1| thymidylate kinase [Bacillus sp. BT1B_CT2] Length = 212 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 10/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+FEG EGAGKTT + L + + V TREPGG +E R V+L+ Sbjct: 2 NGLFITFEGPEGAGKTTILQAAADQLTKNGHSVLATREPGGIEISERIREVILNPSHTAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 + EA+++AAAR H+ ++PAL EGKI+LCDRF+DSS AYQG ++ L +D S Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEEGKIVLCDRFIDSSLAYQG---YARGLGIDEVFS 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ +MP+ TI D+ + G+KR+ + RE LD + + H+ ++ + + Sbjct: 119 VNQFAIGSLMPNVTIYFDIDPEEGIKRI-DLNDAREKNRLDL---EKLHFHQLVQKGYEE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P R IVD++ S + V + NI+ E +++ Sbjct: 175 VMNRFPGRFRIVDASQSVELVLKRVNNIIEEALKE 209 >gi|295094265|emb|CBK83356.1| thymidylate kinase [Coprococcus sp. ART55/1] Length = 207 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/172 (40%), Positives = 106/172 (61%), Gaps = 12/172 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EG +GAGKTT LLK +L++K YDV +TR+PGG P +EA R V+L+ E G Sbjct: 3 GIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKDFTEMG 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120 E +++A+AR V+ I+PAL G+ ++ DRF+DSS YQG + L +D+ + Sbjct: 63 YMTELLLYASARAQLVKENIKPALDAGQAVIADRFVDSSAVYQG---IGRGLGVDTVYKV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 E ++Q +MPD T ++DL G+ R +N+ A LD E + + H+K Sbjct: 120 NEFALQGIMPDMTFLMDLDAQEGISRKKNQ------AELDRMENEKMEFHQK 165 >gi|220911618|ref|YP_002486927.1| dTMP kinase [Arthrobacter chlorophenolicus A6] gi|219858496|gb|ACL38838.1| dTMP kinase [Arthrobacter chlorophenolicus A6] Length = 232 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 118/216 (54%), Gaps = 11/216 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLFI+FEG +GAGK+T + L L+ + V TREPGGTP E R ++L G Sbjct: 5 SAGLFIAFEGGDGAGKSTQAARLAEALESRGLTVLRTREPGGTPIGEKLRSLVLDHGHGH 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118 A EA++FAA+R H VIRPAL G I+L DR++DSS AYQG + + L +D Sbjct: 65 IDAHTEALIFAASRAAHAGQVIRPALERGDIVLTDRYIDSSVAYQG---AGRDLGMDAVR 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL E + + P T++LD+ ++G R A D E + H + R+ FL Sbjct: 122 SLNEWATSGLQPHLTVLLDVEPEVGRTRRTA-----GDATEDRLESEADEFHARIREAFL 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D+A +P ++ + +A IL+ V+ L++ Sbjct: 177 DLAAARPASYLVLPARLPVNDLAAMILDRVFGLLES 212 >gi|242279385|ref|YP_002991514.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638] gi|259494265|sp|C6BUG6|KTHY_DESAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|242122279|gb|ACS79975.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638] Length = 217 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 3/194 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GKTT I L FL+ ++V VT EPGG+ + R +LL+ + Sbjct: 1 MFITFEGIEGTGKTTQIKKLTAFLEESGHNVDVTLEPGGSRIGKELRKILLNMDSTDITG 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++ A R HV VI+PA+ GKI++ DRF DS+ YQG L L +++ Sbjct: 61 ECELFLYLADRAQHVGQVIKPAVEAGKIIISDRFADSTIVYQGYGRGLDPKLLRELNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182 V PD TI+LD+ +IGLKR R +L+E+ + FE + + H + R+ +L A Sbjct: 121 VSGNWPDLTILLDIDPEIGLKRAMTR-NLQENKMQEEGRFEAESLEFHNRVREGYLTWAA 179 Query: 183 NQPDRCHIVDSAHS 196 DR +V++ + Sbjct: 180 LNNDRIVVVNADQT 193 >gi|159897030|ref|YP_001543277.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779] gi|229621739|sp|A9AV71|KTHY_HERA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|159890069|gb|ABX03149.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 236 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 117/223 (52%), Gaps = 19/223 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG+GK+T LK +LQ+ Y V +TREPGGTP ++A R ++L Sbjct: 3 LFITFEGPEGSGKSTQARYLKDYLQQAGYPVILTREPGGTPISDAVRRLVLDGQWTAMEP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++FAAAR V VI P L G I+LCDR+ DS++A+QG L + + Sbjct: 63 TTETLLFAAARAQLVGEVILPYLKLGGIVLCDRYADSTFAHQGYGLGRNLTELREITRFA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL---------------DYFER---K 165 + PD T LDLPV+ GL+R + R RES+ L +++ R + Sbjct: 123 TGGLQPDLTFFLDLPVEQGLQRKRKQRDDFRESSQLALPLPHLPQPSPSQNEHWNRLDAR 182 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ HE+ R +L++ P R + D+ +S+ +L V Sbjct: 183 EIAYHERVRSGYLEMIAADPQRWQVFDAGIERESLTEQLLLAV 225 >gi|121594087|ref|YP_985983.1| thymidylate kinase [Acidovorax sp. JS42] gi|171769451|sp|A1W6N2|KTHY_ACISJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120606167|gb|ABM41907.1| thymidylate kinase [Acidovorax sp. JS42] Length = 217 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 17/216 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEGI+GAGK++HI L + L+ + V +TREPGGTP AE R +LL D Sbjct: 1 MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVALTREPGGTPLAEKLREMLLH---D 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117 A EA++ AAR DH+ VI PAL G+++LCDRF D+++AYQG D ++ Sbjct: 58 SMDALTEALLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117 Query: 118 DSLQEISV---QEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + L + V ++M PD T+ D+P ++ +R L + D FE + V + Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQR------LSAARAPDRFESQPVEFFTR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + D A P R +DS+ + VA + +V Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207 >gi|116669282|ref|YP_830215.1| thymidylate kinase [Arthrobacter sp. FB24] gi|116609391|gb|ABK02115.1| thymidylate kinase [Arthrobacter sp. FB24] Length = 226 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/215 (37%), Positives = 113/215 (52%), Gaps = 7/215 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFI+FEG +GAGK+T + L L + V TREPGGTP E R ++L G Sbjct: 5 NPGLFIAFEGGDGAGKSTQAAALAGALDSRGIRVLRTREPGGTPIGEKLRSLVLDHGHGH 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAA+R H + VI PAL G+I+L DR++DSS AYQG + L Sbjct: 65 IDARTEALIFAASRAAHADQVILPALERGEIVLTDRYIDSSVAYQGAGRDLGTAAVRDLN 124 Query: 122 EISVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T++LD+ +G L+R A D E + H K R FLD+ Sbjct: 125 EWATSGLQPDLTVLLDVDPAVGRLRRTAG------DAAEDRMESEADEFHAKIRTAFLDL 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A ++P+ ++ + +A IL V L+ R Sbjct: 179 AADRPEHYLVLPAHLPVAELAGLILARVDSLIGSR 213 >gi|282898411|ref|ZP_06306402.1| Thymidylate kinase [Raphidiopsis brookii D9] gi|281196942|gb|EFA71847.1| Thymidylate kinase [Raphidiopsis brookii D9] Length = 216 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62 G I FEG+EG+GKTT + +L ++LQ +TREPGGT + R +LL ++ Sbjct: 3 GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTDLGKNLRKLLLETSYEQPL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++ A R HV ++I+P L GK +LCDR+ +S+ AYQG +D L + Sbjct: 63 DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTIAYQGYGRGLNMTIIDQLNQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + D TI LD+ V+IGL R R A LD E++ + H + ++ + +IA+ Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQKGYNEIAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N P + VD + V NI I+ Sbjct: 177 NHPSKMIRVDGNGGQELVQENIRKIL 202 >gi|257790898|ref|YP_003181504.1| thymidylate kinase [Eggerthella lenta DSM 2243] gi|317488389|ref|ZP_07946944.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA] gi|325830525|ref|ZP_08163978.1| dTMP kinase [Eggerthella sp. HGA1] gi|257474795|gb|ACV55115.1| thymidylate kinase [Eggerthella lenta DSM 2243] gi|316912509|gb|EFV34063.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA] gi|325487434|gb|EGC89875.1| dTMP kinase [Eggerthella sp. HGA1] Length = 244 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 75/192 (39%), Positives = 102/192 (53%), Gaps = 8/192 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG EGAGKTTHI L L+ +V REPGGT E R V+L Sbjct: 14 GIFITFEGGEGAGKTTHIRFLSETLRAHGREVLCLREPGGTEVGEQLRAVVLDPANGGMS 73 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE +++ AAR + VI PAL G ++LCDRF DS+ AYQ +F+D + E Sbjct: 74 DEAELLIYEAARAQLMAQVIAPALARGAVVLCDRFTDSTVAYQAYGRGLPRMFVDRVNEF 133 Query: 124 SVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + Q V PD TI++ ++GL R +R D E+ H + + FL+IA Sbjct: 134 ACQGVHPDRTILMATGGEANVGLVRATHR------GAADRLEQAGEEFHARVNEAFLEIA 187 Query: 182 RNQPDRCHIVDS 193 R P+R +V S Sbjct: 188 RRDPERVRVVVS 199 >gi|228476228|ref|ZP_04060931.1| dTMP kinase [Staphylococcus hominis SK119] gi|228269713|gb|EEK11212.1| dTMP kinase [Staphylococcus hominis SK119] Length = 205 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT ++ + + L +NY+V TREPGG E R++LL + Sbjct: 4 FITFEGPEGSGKTTVLNQINKLLS-ENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL K++LCDR++DSS AYQG + + E ++ Sbjct: 61 TEALLFAASRREHLVEKVIPALKNNKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++ + H+K + + + + P Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +VD+ S +SV +N I+ ++ Sbjct: 176 ERFKVVDATQSIESVISNTYEIILSYLK 203 >gi|284048006|ref|YP_003398345.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731] gi|283952227|gb|ADB47030.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731] Length = 206 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 7/204 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+ EG +G GKTT L R+ + + +TREPGGT AE+ R ++L +D Sbjct: 3 QKGLFITLEGPDGGGKTTQAQQLARWFRLYGRETVITREPGGTATAESIRELVLDPALD- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E ++ AAR DHV+ VIRPAL GK+++CDRF DS+ YQG L L Sbjct: 62 LSPETETLLQLAARADHVDQVIRPALEAGKVVICDRFTDSTMVYQGILRDMDLAQLRKLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + + PD T++LD +KR +NR +D FE + + ++ R +L +A Sbjct: 122 DFATRGLRPDVTLLLDGDPRELVKRRENR------GTVDKFELQGLAYQDRIRAGYLRLA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205 + +P+R +VD+ + V I+ Sbjct: 176 QEEPERILVVDALREPEVVTEEII 199 >gi|326693439|ref|ZP_08230444.1| thymidylate kinase [Leuconostoc argentinum KCTC 3773] Length = 217 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 13/220 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ + L LQ + + VT REPGG P +EA R +L Sbjct: 1 MTKPLFITFEGPEGAGKTSVLQALVAELQPQLGEALVTTREPGGNPISEAIRAILQPAED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ +V+ PAL GK+++ DR++DSS AYQG + L ++ Sbjct: 61 NGMDDRTEALLYTAARRQHLVSVVLPALEAGKVVISDRYVDSSLAYQG---GGRGLGIEQ 117 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175 + +I ++ +MPD TI D+P ++GL RV NR +D +++ + H+ R+ Sbjct: 118 IWQINQFAIDGLMPDLTIYFDVPAEVGLARVMANRQD-----KIDRLDKESLAFHQAVRE 172 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L + R+ DR ++D+ + V ++++++ R Sbjct: 173 TYLALQRDFSDRIKLIDATQPLEQVIAETRTLLFDIIASR 212 >gi|296315027|ref|ZP_06864968.1| dTMP kinase [Neisseria polysaccharea ATCC 43768] gi|296838232|gb|EFH22170.1| dTMP kinase [Neisseria polysaccharea ATCC 43768] Length = 206 Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ +S D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIG------QSREKDRFEQEQEDFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS S V NI ++ Sbjct: 178 ERYAVIDSNRSLDEVRNNIERVL 200 >gi|293194284|ref|ZP_06609970.1| dTMP kinase [Actinomyces odontolyticus F0309] gi|292819731|gb|EFF78745.1| dTMP kinase [Actinomyces odontolyticus F0309] Length = 271 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 120/210 (57%), Gaps = 15/210 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG +G+GK+T I ++ + + + +V VTREPGGT R L+ G ++ Sbjct: 5 GVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRR-LVQNGPEDVD 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120 A EA+++AA R HV VI PAL G ++L DR++DSS AYQG +++ L +D SL Sbjct: 64 ARTEALLYAADRAYHVATVIAPALERGAVVLGDRYIDSSLAYQG---AARSLGVDEIASL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + P T +LDLP ++GL R + D ER+ + HE+ R +L + Sbjct: 121 SAWATRGLYPSLTFLLDLPPEVGLHRHTD--------APDRMERESMDFHERVRHEYLRL 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A +PDR ++D+ + V + I ++ E Sbjct: 173 ADAEPDRIVVIDAVGTVDEVFSEIRGVLVE 202 >gi|239501058|ref|ZP_04660368.1| thymidylate kinase [Acinetobacter baumannii AB900] Length = 199 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KAEPERIKRIDATQS 186 >gi|88705148|ref|ZP_01102860.1| Thymidylate kinase [Congregibacter litoralis KT71] gi|88700843|gb|EAQ97950.1| Thymidylate kinase [Congregibacter litoralis KT71] Length = 209 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I +G GAGKTT I ++ LQ N + TREPGGTP E R +LLS Sbjct: 1 MKKGRMIVVDGSNGAGKTTVIEAIRDHLQHVNRETVFTREPGGTPIGEKIREILLSPEAG 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++FAAAR HV I PA+ GK+++ DRF ++ ++Q + +L Sbjct: 61 EMADVTELMLFAAARAQHVREKIMPAVEAGKVVVSDRFDSATVSFQHYARGLPLELITTL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 EI+V + PD TIILDL + GL RV +R LD E++ + K R +L Sbjct: 121 NEIAVDGLKPDMTIILDLDPEAGLVRVGSR-----GDDLDRLEKEKLDFLHKARDGYLGQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ PD ++D++ S +V + +L++V ++++ Sbjct: 176 AKASPDNFVVIDASQSLDNVISEVLSVVDQVIE 208 >gi|194468114|ref|ZP_03074100.1| dTMP kinase [Lactobacillus reuteri 100-23] gi|194452967|gb|EDX41865.1| dTMP kinase [Lactobacillus reuteri 100-23] Length = 213 Score = 129 bits (324), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 6/203 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ I ++R L Q V TREPGG +E R VL + Sbjct: 3 GKFISFEGPDGAGKTSVIQQIQRELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDRF+DSS AYQG + + Sbjct: 63 MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ +MP TI LD+ +IGLKR+ + S ++ + + + H RQ +L + Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRI----AEHRSNQVNRLDEEKLEFHRTVRQSYLKLY 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 +N P+R ++D++ + V ++ Sbjct: 179 QNYPERIKLIDASQPLKKVIEDV 201 >gi|294011646|ref|YP_003545106.1| dTMP kinase [Sphingobium japonicum UT26S] gi|292674976|dbj|BAI96494.1| dTMP kinase [Sphingobium japonicum UT26S] Length = 213 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 83/209 (39%), Positives = 111/209 (53%), Gaps = 5/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FIS EG EGAGK+T + L L+ + DV TREPGG+ AEA R +LL+ G D + Sbjct: 9 GRFISLEGGEGAGKSTQLRALAAALRARGLDVVETREPGGSEGAEAIRALLLTGGADRWS 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++FAAAR DHVE IRPAL G +L DRFLDSS AYQG + L +L I Sbjct: 69 PRAEALLFAAARADHVEKTIRPALERGAWVLSDRFLDSSRAYQGMGALTDADIL-ALHRI 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +PD T+ L LP + R ++ R+ D +D H F A Sbjct: 128 GSDGFLPDRTLFLTLPEEEASARARS----RDGDAADRIGGRDRDFHLAVSTAFHRFAAQ 183 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R VD++ +V ++ V +L+ Sbjct: 184 EPTRFLAVDASGEAGAVTARLIEAVRDLL 212 >gi|169632744|ref|YP_001706480.1| thymidylate kinase [Acinetobacter baumannii SDF] gi|184159124|ref|YP_001847463.1| thymidylate kinase [Acinetobacter baumannii ACICU] gi|260556574|ref|ZP_05828792.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606] gi|294841418|ref|ZP_06786101.1| thymidylate kinase [Acinetobacter sp. 6014059] gi|229487548|sp|B2HWQ7|KTHY_ACIBC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487549|sp|B0VTL6|KTHY_ACIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169151536|emb|CAP00303.1| thymidylate kinase [Acinetobacter baumannii] gi|183210718|gb|ACC58116.1| Thymidylate kinase [Acinetobacter baumannii ACICU] gi|260409833|gb|EEX03133.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606] gi|322509038|gb|ADX04492.1| tmk [Acinetobacter baumannii 1656-2] gi|323519020|gb|ADX93401.1| thymidylate kinase [Acinetobacter baumannii TCDC-AB0715] Length = 199 Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KAEPERIKRLDATQS 186 >gi|59800692|ref|YP_207404.1| thymidylate kinase [Neisseria gonorrhoeae FA 1090] gi|194097952|ref|YP_002000998.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945] gi|240013551|ref|ZP_04720464.1| thymidylate kinase [Neisseria gonorrhoeae DGI18] gi|240015990|ref|ZP_04722530.1| thymidylate kinase [Neisseria gonorrhoeae FA6140] gi|240080130|ref|ZP_04724673.1| thymidylate kinase [Neisseria gonorrhoeae FA19] gi|240112344|ref|ZP_04726834.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|240115084|ref|ZP_04729146.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|240117368|ref|ZP_04731430.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|240120623|ref|ZP_04733585.1| thymidylate kinase [Neisseria gonorrhoeae PID24-1] gi|240122923|ref|ZP_04735879.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|240125177|ref|ZP_04738063.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|240127632|ref|ZP_04740293.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|254493144|ref|ZP_05106315.1| thymidylate kinase [Neisseria gonorrhoeae 1291] gi|260441100|ref|ZP_05794916.1| thymidylate kinase [Neisseria gonorrhoeae DGI2] gi|268596281|ref|ZP_06130448.1| thymidylate kinase [Neisseria gonorrhoeae FA19] gi|268598402|ref|ZP_06132569.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|268600757|ref|ZP_06134924.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|268603063|ref|ZP_06137230.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|268681542|ref|ZP_06148404.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|268683771|ref|ZP_06150633.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|268686011|ref|ZP_06152873.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|291044433|ref|ZP_06570142.1| thymidylate kinase [Neisseria gonorrhoeae DGI2] gi|293399613|ref|ZP_06643766.1| thymidylate kinase [Neisseria gonorrhoeae F62] gi|73920825|sp|Q5F9Z5|KTHY_NEIG1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621733|sp|B4RJR3|KTHY_NEIG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59717587|gb|AAW88992.1| putative thymidylate kinase [Neisseria gonorrhoeae FA 1090] gi|193933242|gb|ACF29066.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945] gi|226512184|gb|EEH61529.1| thymidylate kinase [Neisseria gonorrhoeae 1291] gi|268550069|gb|EEZ45088.1| thymidylate kinase [Neisseria gonorrhoeae FA19] gi|268582533|gb|EEZ47209.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|268584888|gb|EEZ49564.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|268587194|gb|EEZ51870.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|268621826|gb|EEZ54226.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|268624055|gb|EEZ56455.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|268626295|gb|EEZ58695.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|291011327|gb|EFE03323.1| thymidylate kinase [Neisseria gonorrhoeae DGI2] gi|291610182|gb|EFF39304.1| thymidylate kinase [Neisseria gonorrhoeae F62] Length = 206 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---AREK---DRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS S V +I ++ Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200 >gi|227824456|ref|ZP_03989288.1| thymidylate kinase [Acidaminococcus sp. D21] gi|226904955|gb|EEH90873.1| thymidylate kinase [Acidaminococcus sp. D21] Length = 205 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 118/215 (54%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT LK +L+ K +V +TREPGGT AE R + LS + Sbjct: 1 MKKGLFITLEGPDGSGKTTQAKRLKAYLETKGREVVLTREPGGTGLAETLRSLALSPEI- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+++ AAR DHV+ VIRPAL GK+++CDRF DS+ YQG + LD L Sbjct: 60 TMSKRVESLLHVAARADHVDKVIRPALEAGKVVICDRFSDSTLIYQGILGG---MDLDEL 116 Query: 121 QEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + +S+ + + PD T ++D + L R + R D FE + ++ EK RQ + Sbjct: 117 ERLSLFGSKGLSPDVTFLIDGNPRVLLSRREAR------GVTDKFEAQGLLFQEKIRQGY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L + P+R ++D + SV ++ V + + Sbjct: 171 LTLLDRYPERMILIDGEGTPDSVTDALIKKVEKFL 205 >gi|261392957|emb|CAX50542.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis 8013] gi|325141921|gb|EGC64362.1| thymidylate kinase [Neisseria meningitidis 961-5945] Length = 206 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R I+DS S V +I ++ Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200 >gi|226952159|ref|ZP_03822623.1| thymidylate kinase [Acinetobacter sp. ATCC 27244] gi|226837095|gb|EEH69478.1| thymidylate kinase [Acinetobacter sp. ATCC 27244] Length = 201 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 12/210 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ +++ +V +TREPGGTP AE R +LL+ +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GKI+L DRF D+S+AYQ S + L + LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEAGKIVLSDRFTDASFAYQC---SGRGLSQEKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R + + Sbjct: 118 NQTFVAKMPNITFWLDAPIELGMTRA------RERGALDRFEQEKLSFFAKVRAGYETLW 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +P+R +++ + V LN + +L Sbjct: 172 QAEPERIKRLNATQNADLVFEEALNYIKQL 201 >gi|295702267|ref|YP_003595342.1| thymidylate kinase [Bacillus megaterium DSM 319] gi|294799926|gb|ADF36992.1| thymidylate kinase [Bacillus megaterium DSM 319] Length = 208 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 116/198 (58%), Gaps = 4/198 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT I ++++ L ++ Y++ +TREPGG AE R ++L+ E Sbjct: 2 SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYNIVLTREPGGIRIAEQIREIILNPSNTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + P L +G I+LCDRF+DSS AYQG + ++ + Sbjct: 62 DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++++ MP T+ D+ ++GL+R+ N+ E LD + + H K R +L + Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERI-NKGRKDEINRLDL---ESLDFHYKVRDGYLSLLS 177 Query: 183 NQPDRCHIVDSAHSFQSV 200 P+R +D+ S + V Sbjct: 178 EFPERIRRIDANQSVEKV 195 >gi|302873019|ref|YP_003841652.1| thymidylate kinase [Clostridium cellulovorans 743B] gi|307688812|ref|ZP_07631258.1| thymidylate kinase [Clostridium cellulovorans 743B] gi|302575876|gb|ADL49888.1| thymidylate kinase [Clostridium cellulovorans 743B] Length = 212 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G I+ EG +G+GK+T I LLK++ + Y+V TREPGGT +E R ++L +E Sbjct: 8 NRGYLITIEGPDGSGKSTQIELLKKYFNDRGYEVVTTREPGGTKISEKIRELILDNDNEE 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120 EA+++AA+R VE V++PA+ EGKI+LCDRF+ SS YQG R+ + L+ + Sbjct: 68 MNGICEALLYAASRAQLVEQVLKPAIYEGKIVLCDRFVHSSLVYQGYARELGVNQVLN-I 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + D TI++D+P ++G++R R+ LD E H K + I Sbjct: 127 NEFALNGLKADLTIMIDIPYELGIERK------RKQKKLDRLENGGDEFHNKVFNGYQQI 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + I+D + + + +I+ + EL Sbjct: 181 VKTMKNVV-IIDGTKAVEEIHKDIVKTIAEL 210 >gi|146277283|ref|YP_001167442.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17025] gi|145555524|gb|ABP70137.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17025] Length = 217 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 5/206 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++ EGI+G+GK+ + L L+ +V VTREPGGTP EA R ++L+ + Sbjct: 4 QGGLFLAVEGIDGSGKSGIVQHLAARLRAHGREVVVTREPGGTPEGEAIRGLVLAGADEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE ++ AAR+ HV VI PAL G ++L DR+ S+ AYQG F+ +L Sbjct: 64 WDPMAELLLMTAARVQHVRRVIAPALEAGSVVLSDRYAGSTLAYQGTGRGLSESFIRALH 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLD 179 + ++ PD T+ILDL GL R + R + + +D FE D+ HE+ RQ F Sbjct: 124 AEATGDLWPDLTLILDLDAATGLARSRRRLT---GSAIDEGRFESLDLAFHERIRQSFRA 180 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 A P R ++D++ + + V L Sbjct: 181 QAARDPARHAVIDASGTPEQVQARAL 206 >gi|284989206|ref|YP_003407760.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160] gi|284062451|gb|ADB73389.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160] Length = 225 Score = 129 bits (323), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 12/216 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG EGAGK+T + LL +L + T EPGGTPA A R ++L Sbjct: 19 GLFIAFEGGEGAGKSTQVRLLCEWLTAQGRPARATFEPGGTPAGAAVRAIVLDRAHTGLS 78 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R H V+RPAL G++++ DR++DSS AYQG + + + LD + I Sbjct: 79 PRAEALLYAADRAQHAHAVLRPALEAGEVVVTDRYVDSSLAYQG---AGRTIGLDDVAAI 135 Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S + PD T++LDLP + GL R + A D E + + H++ R F + Sbjct: 136 SRWATLGLRPDLTVLLDLPPETGLARARG------RAAADRLESESLEFHQRVRDTFRTL 189 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A +P R ++D+ +A ++ V L+ +R Sbjct: 190 AAAEPGRYLVLDATRGVDELAADVRARVGALLGERA 225 >gi|258591911|emb|CBE68216.1| thymidylate kinase [NC10 bacterium 'Dutch sediment'] Length = 243 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 111/213 (52%), Gaps = 11/213 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F++FEG EG+GKTT + LL ++ +V T +PGGT + R +LL G Sbjct: 20 GIFVTFEGGEGSGKTTQLKLLANRIRASGKEVIETHDPGGTAIGKEIRTLLLDPGSAPIA 79 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E +++ A+R V +I P L +G ++LCDRF DS+ AYQG S + L Sbjct: 80 STTELLLYEASRAQLVRELIAPTLRQGVVVLCDRFTDSTLAYQGFGRSLDLDLIQRLNRC 139 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL-------RESACLDYFERKDVMIHEKRRQI 176 + V+PD TI+ DL +IGL R + SL E AC D E + + H + R+ Sbjct: 140 ATDGVVPDLTILFDLDPEIGLTRCRRDTSLDAVTGSGAEPACWDRIEAEPLEFHRRIREG 199 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +L +AR DR ++D+ T I IVW Sbjct: 200 YLALARENRDRMIVIDAGVGV----TEIETIVW 228 >gi|229816418|ref|ZP_04446719.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM 13280] gi|229807960|gb|EEP43761.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM 13280] Length = 226 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 105/201 (52%), Gaps = 6/201 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EGI+G GK+T L+ L+ +DV REPGG +E R +LL E G Sbjct: 5 GLFITVEGIDGCGKSTQARLIAAALEAAGHDVLRLREPGGVKISEQIREILLDPANVEMG 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++ AAR V VIRPAL GK ++CDRF DS+ AYQ D + E+ Sbjct: 65 DVCELLLYEAARAQLVHQVIRPALAAGKTVVCDRFYDSTTAYQAFADGLDRNMVSQANEL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V PD T++ DLPV+ L+R R + D E K + E+ F +A + Sbjct: 125 AVDGCRPDLTLVFDLPVEDALRRRSGREA------EDRLELKGLEFQERVAAGFRAVAVD 178 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 +PDR ++D+ S V + + Sbjct: 179 EPDRVKLIDAGGSIAEVFSGV 199 >gi|114762660|ref|ZP_01442094.1| thymidylate kinase [Pelagibaca bermudensis HTCC2601] gi|114544570|gb|EAU47576.1| thymidylate kinase [Roseovarius sp. HTCC2601] Length = 208 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 77/203 (37%), Positives = 115/203 (56%), Gaps = 6/203 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFISFEGI+G+GK+T LL L+ +V +TREPGG+P AE R ++L + Sbjct: 4 GTGLFISFEGIDGSGKSTQARLLAEHLRSTGREVVLTREPGGSPGAEEIRALVLQGDPER 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E IRPAL G ++CDRF DS+ YQG +D+L Sbjct: 64 WSAETELLLFTAARRDHLERTIRPALARGATVICDRFADSTRMYQGLSRGDLRGAVDTLH 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD T+++D+ + L R + R + E FE + + +K R FL +A Sbjct: 124 ALMIG-VEPDLTLLIDMDPEAALARAKARATAEE-----RFEDFGLPLQQKMRAGFLALA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 R IVD + ++VA ++ Sbjct: 178 AEFSGRFRIVDGNRAPEAVAQDV 200 >gi|294496900|ref|YP_003560600.1| thymidylate kinase [Bacillus megaterium QM B1551] gi|294346837|gb|ADE67166.1| thymidylate kinase [Bacillus megaterium QM B1551] Length = 208 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 114/198 (57%), Gaps = 4/198 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT I ++++ L ++ Y + +TREPGG AE R ++L+ E Sbjct: 2 SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYTIVLTREPGGIRIAEQIREIILNPSNTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + P L +G I+LCDRF+DSS AYQG + ++ + Sbjct: 62 DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++++ MP T+ D+ ++GL+R+ N ++ + + + H K R +L + Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERINN----GRKDEINRLDLESLDFHYKVRDGYLSLLS 177 Query: 183 NQPDRCHIVDSAHSFQSV 200 P+R +D+ S + V Sbjct: 178 EFPERIRRIDANQSVEKV 195 >gi|315644344|ref|ZP_07897484.1| thymidylate kinase [Paenibacillus vortex V453] gi|315280221|gb|EFU43513.1| thymidylate kinase [Paenibacillus vortex V453] Length = 214 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ EG EG+GKTT + L F+Q + +TREPGG AE R ++L A Sbjct: 7 LFITLEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRSIILDPEHTAMDA 66 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AAAR H+ + PAL +G +LCDRF+DSS YQG + S+ + + Sbjct: 67 RTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVWSINQFA 126 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++ D+ IGL R+ RE LD +++ HEK R+ +L +A Sbjct: 127 IDTRMPDLTLLFDIEPKIGLSRIAANAE-REWNRLDM---ENLTFHEKVREGYLLVAERN 182 Query: 185 PDRCHIVDSAHS 196 PDR IVD++ + Sbjct: 183 PDRIRIVDASKT 194 >gi|199599031|ref|ZP_03212438.1| Thymidylate kinase [Lactobacillus rhamnosus HN001] gi|258509257|ref|YP_003172008.1| thymidylate kinase [Lactobacillus rhamnosus GG] gi|199590067|gb|EDY98166.1| Thymidylate kinase [Lactobacillus rhamnosus HN001] gi|257149184|emb|CAR88157.1| Thymidylate kinase [Lactobacillus rhamnosus GG] gi|259650539|dbj|BAI42701.1| thymidylate kinase [Lactobacillus rhamnosus GG] Length = 215 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 4/209 (1%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ + +L+ + VH+TREPGG +E R V+L Sbjct: 2 TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL G I++CDRF+DSS AYQG + + Sbjct: 62 MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+PV +GL R+ R+ D +++ + HE+ ++ + Sbjct: 122 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ---YDRLDQESLAFHERVHAAYMKLV 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P R VD+ +V T + E Sbjct: 179 ADNPKRIVTVDATQPLAAVVTAAFMTITE 207 >gi|254804548|ref|YP_003082769.1| Thymidylate kinase [Neisseria meningitidis alpha14] gi|254668090|emb|CBA04608.1| Thymidylate kinase [Neisseria meningitidis alpha14] gi|325127822|gb|EGC50730.1| thymidylate kinase [Neisseria meningitidis N1568] Length = 206 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 120/203 (59%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS + V +I ++ Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200 >gi|50085662|ref|YP_047172.1| thymidylate kinase [Acinetobacter sp. ADP1] gi|59798252|sp|Q6F9B5|KTHY_ACIAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49531638|emb|CAG69350.1| thymidylate kinase [Acinetobacter sp. ADP1] Length = 202 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 79/209 (37%), Positives = 113/209 (54%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I L + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKLYEHFEASGKQVVLTREPGGTPLAEQIRSLLLAVNHDEPMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ E ++ AAR H++ VI PAL + K++L DRF D+SYAYQ L++L + Sbjct: 61 SDTELLLMYAARAQHLQQVIVPALADEKLVLSDRFTDASYAYQCVGRGLSKDKLNTLNQT 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T LD P+++G+ R RE LD FE++ V ++ RQ + + Sbjct: 121 FVSH-MPDITFWLDAPIELGMSRA------RERGALDRFEQEKVEFFQRVRQGYQQLHEL 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +D+ + + V L + LV Sbjct: 174 YPERIKRLDATQAPEIVFQEALEHIQALV 202 >gi|328478590|gb|EGF48257.1| thymidylate kinase [Lactobacillus rhamnosus MTCC 5462] Length = 226 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 4/209 (1%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ + +L+ + VH+TREPGG +E R V+L Sbjct: 13 TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL G I++CDRF+DSS AYQG + + Sbjct: 73 MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+PV +GL R+ R+ D +++ + HE+ ++ + Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ---YDRLDQESLAFHERVHAAYMKLV 189 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P R VD+ +V T + E Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITE 218 >gi|229487554|sp|A3M7Q1|KTHY_ACIBT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|193078024|gb|ABO12945.2| thymidylate kinase [Acinetobacter baumannii ATCC 17978] Length = 199 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KVEPERIKRLDATQS 186 >gi|78187170|ref|YP_375213.1| thymidylate kinase [Chlorobium luteolum DSM 273] gi|123582911|sp|Q3B3B1|KTHY_PELLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78167072|gb|ABB24170.1| thymidylate kinase [Chlorobium luteolum DSM 273] Length = 214 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 4/209 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L +L+++ +V REPGGT AE RH+LL D Sbjct: 1 MLITFEGIDGAGKSTQIQKLAAYLKQEGREVLTLREPGGTEVAEKIRHILLESRHD-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V V+RPAL EGK ++ DRF DS+ AYQG L +L IS Sbjct: 60 VGELLLFSASRAELVSEVVRPALAEGKTVILDRFFDSTTAYQGYGRGLDLNMLRTLIAIS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + SL E+ LD ER + + RQ +LDI Sbjct: 120 TGALTPDITFYLDILPEEALIRKFSEKSLPLAFENEELDRMERSGLEFYRNVRQGYLDII 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P R +++ H Q + I+ + E Sbjct: 180 EAEPGRFKSINARHGVQEIHAIIVKTLNE 208 >gi|282901980|ref|ZP_06309878.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505] gi|281193067|gb|EFA68066.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505] Length = 216 Score = 128 bits (322), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62 G I FEG+EG+GKTT + +L ++LQ +TREPGGT + R +LL ++ Sbjct: 3 GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTHLGQNLRKLLLETFYEQPL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++ A R HV ++I+P L GK +LCDR+ +S+ AYQG + +D L + Sbjct: 63 DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTVAYQGYGRGLNMIIIDQLNQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + D TI LD+ V+IGL R R A LD E++ + H + ++ + IA+ Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQEGYNKIAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N P + VD + V NI I+ Sbjct: 177 NHPSKIIRVDGNREPELVQENIRKIL 202 >gi|239908616|ref|YP_002955358.1| thymidylate kinase [Desulfovibrio magneticus RS-1] gi|259494267|sp|C4XNX1|KTHY_DESMR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|239798483|dbj|BAH77472.1| thymidylate kinase [Desulfovibrio magneticus RS-1] Length = 209 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 7/212 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +F++FEG+EG+GK+T ++ L L+ V TR+PGG + R +LLS G+D+ Sbjct: 1 MFVTFEGVEGSGKSTQMTRLCAALEAAGRTVCRTRQPGGCFLGQTLRAILLSQKTAGLDD 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ A R HV VIRPAL G++++CDR+ DS+ AYQG L +L Sbjct: 61 ---RAELFLYLADRAQHVAEVIRPALAAGQVVVCDRYTDSTVAYQGYGRGLDTTLLQNLN 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V+PD T++LDL IGL R +R + + FE + + H++ R + + Sbjct: 118 AVAAAGVVPDLTVLLDLDPAIGLTRATSRNAAAGTAEAEGRFEAERLEFHQRVRAGYRAL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +P R ++D+A S +VA + +V +L+ Sbjct: 178 AAAEPARFAVIDAAPSPDAVAEAVWGVVGKLL 209 >gi|294651029|ref|ZP_06728369.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194] gi|292823130|gb|EFF81993.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194] Length = 199 Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 74/195 (37%), Positives = 114/195 (58%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ +++ +V +TREPGGTP AE R +LL+ +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GKI+L DRF D+S+AYQ S + L + LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQC---SGRGLSQEKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R + + Sbjct: 118 NQTFVAKMPNITFWLDAPIELGMTRA------RERGALDRFEQEKLSFFAKVRAGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ + Sbjct: 172 QAEPERIKRLDATQN 186 >gi|15676568|ref|NP_273712.1| thymidylate kinase [Neisseria meningitidis MC58] gi|14285516|sp|Q9K0D9|KTHY_NEIMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|7225896|gb|AAF41088.1| thymidylate kinase [Neisseria meningitidis MC58] gi|316983637|gb|EFV62618.1| thymidylate kinase [Neisseria meningitidis H44/76] gi|325139881|gb|EGC62412.1| thymidylate kinase [Neisseria meningitidis CU385] gi|325200644|gb|ADY96099.1| thymidylate kinase [Neisseria meningitidis H44/76] Length = 206 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++LD A P Sbjct: 124 GGLKPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS + V +I ++ Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200 >gi|322420736|ref|YP_004199959.1| thymidylate kinase [Geobacter sp. M18] gi|320127123|gb|ADW14683.1| thymidylate kinase [Geobacter sp. M18] Length = 223 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 77/191 (40%), Positives = 107/191 (56%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG+EG GKTT + LLK L+ V TREPGG P A+ R +LL Sbjct: 2 GFFITFEGVEGCGKTTQLRLLKERLESAGEQVVATREPGGCPIADQMRAILLDAKNSAIT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV+ VI PAL G+ +LCDRF D++ AYQG + L + Sbjct: 62 PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRELDLDVIRQLNAL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V P T+++D PV+IGL R +R A + FE + V HE+ R +L +A+ Sbjct: 122 ATGGVEPAVTVLIDCPVEIGLSRALSRIEATSGAREERFELESVRFHERVRAGYLSLAKA 181 Query: 184 QPDRCHIVDSA 194 P R +VD + Sbjct: 182 FPRRFVVVDGS 192 >gi|293609834|ref|ZP_06692136.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828286|gb|EFF86649.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 199 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KAEPERIKRIDATQS 186 >gi|325123060|gb|ADY82583.1| thymidylate kinase [Acinetobacter calcoaceticus PHEA-2] Length = 199 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KAEPERIKRIDATQS 186 >gi|309775015|ref|ZP_07670030.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53] gi|308917233|gb|EFP62958.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53] Length = 210 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 6/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLFI+FEG +G+GKTT L L+ Y V TREPGG AE R V+L Sbjct: 1 MNKGLFITFEGNDGSGKTTISKLAYERLKEMGYPVIYTREPGGIDIAEQIRKVILDPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AA+R H+ + PAL EG I+LCDRF+DSS YQG + ++ Sbjct: 61 AMDERCEALLYAASRRQHLVEKVLPALNEGSIVLCDRFVDSSLVYQGIARGIGMEEVYAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ +PD TI L + + GL RV +R D + + + H+ Q + I Sbjct: 121 NQFAIEGHLPDATIFLSVDFETGLSRVTSR------GNKDRLDNESMEFHKLVAQGYELI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 DR HIVD+ +V N ++ + E+++ V Sbjct: 175 KEKFKDRMHIVDANADVDTVLNNTVSCIMEIIKNHV 210 >gi|294676800|ref|YP_003577415.1| thymidylate kinase [Rhodobacter capsulatus SB 1003] gi|294475620|gb|ADE85008.1| thymidylate kinase [Rhodobacter capsulatus SB 1003] Length = 206 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 6/212 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T LL L DV TREPGG+P AE R ++L D + A Sbjct: 1 MFITFEGIDGSGKSTQARLLAEALAGLGRDVIRTREPGGSPGAEEIRALVLQGDPDRWSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E ++F AAR DH+E I PAL G++++CDRF DS+ YQG +D L + Sbjct: 61 KTEILLFTAARRDHLERTIAPALAAGQVVICDRFADSTRMYQGLSRGDLRGLVDDLHRLM 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T ++D+ +GL R + R E FE + + + R FL +++ Sbjct: 121 IGR-EPDLTFLIDIDPAVGLARAKGRQGHEE-----RFEDMGLAMQVRMRAGFLALSQEF 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R +++ +VA +L++ ++ R Sbjct: 175 SSRFKVIEGDRRPDAVAAEVLDVTLAALRARA 206 >gi|222111179|ref|YP_002553443.1| thymidylate kinase [Acidovorax ebreus TPSY] gi|221730623|gb|ACM33443.1| thymidylate kinase [Acidovorax ebreus TPSY] Length = 217 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 17/216 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEGI+GAGK++HI L + L+ + V +TREPGGTP AE R +LL D Sbjct: 1 MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVTLTREPGGTPLAEKLREMLLH---D 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117 A E ++ AAR DH+ VI PAL G+++LCDRF D+++AYQG D ++ Sbjct: 58 SMDALTETLLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117 Query: 118 DSLQEISV---QEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + L + V ++M PD T+ D+P ++ +R L + D FE + V + Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQR------LSAARAPDRFESQPVEFFTR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + D A P R +DS+ + VA + +V Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207 >gi|312142724|ref|YP_003994170.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus'] gi|311903375|gb|ADQ13816.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus'] Length = 208 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 117/209 (55%), Gaps = 7/209 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGIEG+GK+T I LL +L+++ +V +TREPGGT + R +LL + Sbjct: 1 MGEGFFITFEGIEGSGKSTQIKLLGDYLKKEGKEVVITREPGGTELGKKIRQLLLDPAHE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++ A R H ++VI+PAL GK+++ DRF DS+ AYQ + + + Sbjct: 61 DMDYRTEILLYTADRAQHFKDVIKPALKAGKVVISDRFADSNLAYQAAGRGLDYELVYKI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + PD T +LD+ + GLKR + + + L D ER+ H++ R+ +L+ Sbjct: 121 NDWVIDSRWPDLTFVLDVAIAEGLKRARASSFDLNG----DRLEREADSFHQRVRKAYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + DR +VD + + V + NI+ Sbjct: 177 MVKR--DRFALVDGNLAEEEVHQEVKNII 203 >gi|285017427|ref|YP_003375138.1| thymidylate kinase (dtmp kinase) protein [Xanthomonas albilineans GPE PC73] gi|283472645|emb|CBA15150.1| probable thymidylate kinase (dtmp kinase) protein [Xanthomonas albilineans] Length = 223 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 80/197 (40%), Positives = 109/197 (55%), Gaps = 16/197 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDE 61 F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE R +LL S + Sbjct: 11 FVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDTAPSSSAEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E ++ AAR HV VIRPAL G ++ DRF DSSYAYQGE ++ L+ Sbjct: 71 LSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWIADLE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178 +V + P T++LDL V IG R R + R ES D+F+R R F Sbjct: 131 RRAVG-LQPGLTLLLDLDVQIGRARTSGRDLWPDRIESEQDDFFQRV--------RAGFR 181 Query: 179 DIARNQPDRCHIVDSAH 195 A P R ++D++ Sbjct: 182 QRATQDPQRFRVIDASQ 198 >gi|58038509|ref|YP_190473.1| thymidylate kinase [Gluconobacter oxydans 621H] gi|81557238|sp|Q5FUU6|KTHY_GLUOX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58000923|gb|AAW59817.1| Thymidylate kinase [Gluconobacter oxydans 621H] Length = 214 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 120/213 (56%), Gaps = 12/213 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+ EG EGAGK+T LL L+ + + V +TREPGGTP AE R++LL VD Sbjct: 3 GKGLFITLEGGEGAGKSTQARLLAEALRAEGHKVLLTREPGGTPGAEEIRNLLLFGKVD- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHL-FL 117 AE ++ AAR DH++N I PAL G+I++CDRF DS+ AYQG + + + L FL Sbjct: 62 LSWRAEILMHMAARSDHLDNAILPALERGEIVVCDRFHDSTLAYQGYGIGQGAPEVLAFL 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + +++ + PD T++L+LP L R++ R D +E + HE+ F Sbjct: 122 NGARKLV--DFEPDLTLMLELPRPQALARLKAR-----GGQTDRYEAQAEAFHERVLAGF 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 IA P R VD+ + ++V+ +L V E Sbjct: 175 DAIASADPVRVKRVDAGQTPEAVSAALLQAVHE 207 >gi|325133815|gb|EGC56471.1| thymidylate kinase [Neisseria meningitidis M13399] gi|325143942|gb|EGC66252.1| thymidylate kinase [Neisseria meningitidis M01-240013] gi|325206485|gb|ADZ01938.1| thymidylate kinase [Neisseria meningitidis M04-240196] Length = 206 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200 >gi|229552948|ref|ZP_04441673.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1] gi|229313692|gb|EEN79665.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1] Length = 226 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 4/209 (1%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ + +L+ + VH+TREPGG +E R V+L Sbjct: 13 TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISEMIRDVILDPKNTA 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL G I++CDRF+DSS AYQG + + Sbjct: 73 MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+PV +GL R+ R+ D +++ + HE+ ++ + Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ---YDRLDQESLAFHERVHAAYMKLV 189 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P R VD+ +V T + E Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITE 218 >gi|169351616|ref|ZP_02868554.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552] gi|169291838|gb|EDS73971.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552] Length = 206 Score = 128 bits (321), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 124/212 (58%), Gaps = 11/212 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG +G+GKTT ++ L + Y V +TREPGG AE R ++L Sbjct: 3 GKFITLEGPDGSGKTTISKIVFDQLMAEGYKVLLTREPGGIDIAEQIRAIILDKKNIAME 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AAAR H+ I PAL +G +++CDRF+DSS YQG ++++ +D + +I Sbjct: 63 ARTEALLYAAARRQHLIEKIEPALNDGYLVICDRFIDSSLVYQG---VARNIGIDEVYQI 119 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +V PD TI D+P +IGL+R+ + R++ LD E D H+K + ++ I Sbjct: 120 NLFAIGDVFPDTTIFFDIPYEIGLERINKNH--RDTDRLD-LESND--FHKKVYEGYMSI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +D++ S VA+ +++I+ +++ Sbjct: 175 CEKYADRITKIDASKSIDEVASQVIDIIKKII 206 >gi|319891435|ref|YP_004148310.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03] gi|317161131|gb|ADV04674.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03] gi|323465395|gb|ADX77548.1| thymidylate kinase [Staphylococcus pseudintermedius ED99] Length = 205 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 119/208 (57%), Gaps = 8/208 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ EG EG+GKTT + + L ++YDV TREPGG AEA R +LL + A Sbjct: 3 LFITIEGPEGSGKTTVVQAVSEQLA-QHYDVMTTREPGGVQTAEAIRQILLDG--ETMDA 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA+R +H+ + PAL +G++++CDRF+DSS AYQG + ++ + + Sbjct: 60 RTEALLFAASRREHLVAKVLPALSQGRLVICDRFIDSSLAYQGYARKIGVKEVQAINDFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD TI LD+P ++G R+++ + + +++ V HE+ + + + Sbjct: 120 IEGRYPDLTIYLDIPAEVGRTRIESNRRAQ-----NRLDKESVAFHERVVEGYQQLIAQD 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++++ S + V T L ++ + + Sbjct: 175 PKRFAVINANQSIEQVVTAALQVILQKI 202 >gi|120612065|ref|YP_971743.1| thymidylate kinase [Acidovorax citrulli AAC00-1] gi|166221717|sp|A1TSN1|KTHY_ACIAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120590529|gb|ABM33969.1| thymidylate kinase [Acidovorax citrulli AAC00-1] Length = 221 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 17/213 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK++HI + L+R+ V VTREPGGTP AE R +LL+ +D Sbjct: 5 GWFITFEGIDGAGKSSHIEAVAEALRREGRTVTVTREPGGTPLAETLRSLLLNEAMD--- 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E++V A R DH+ +VI PAL+ G+++LCDRF D+++AYQG L L+ I Sbjct: 62 ALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLERI 121 Query: 124 S---VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + +QE + P T+ DL D+ R++ + D FE + V + Q Sbjct: 122 TQSGLQEGTDAVLHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRVAQ 175 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + D A P R +D+ ++V ++ I+ Sbjct: 176 GYADRAAADPGRFARLDADQPREAVRAQLMEIL 208 >gi|134094620|ref|YP_001099695.1| thymidylate kinase [Herminiimonas arsenicoxydans] gi|166221746|sp|A4G4Y1|KTHY_HERAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|133738523|emb|CAL61568.1| thymidylate kinase (dTMP kinase) [Herminiimonas arsenicoxydans] Length = 204 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 9/208 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+FEGI+GAGK+TH+S + L+ +V VTREPGGT EA R +LL + Sbjct: 1 MTKAKFITFEGIDGAGKSTHLSFVADLLRASKKNVVVTREPGGTSLGEALRTILLH---E 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ AAR +H+ +I PAL G ++ DRF D+++AYQG L L Sbjct: 58 KMHLETEALLMFAARREHIAQLIEPALARGDWVISDRFTDATFAYQGGGRKLDRQKLSVL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++ D+P+D+ R L + LD FE++ R +L Sbjct: 118 EQWVHPHLQPDLTLLFDVPLDVA------RARLDATRTLDKFEQEQADFFAATRAEYLRR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R I+DS + ++ + +I+ Sbjct: 172 AAEFPQRFRIIDSTQAIATIQEQLRDII 199 >gi|114565616|ref|YP_752770.1| dTMP kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336551|gb|ABI67399.1| thymidylate kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 210 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 12/211 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFIS EGI+G GKT+ L ++ + + V REPGGT +E R +LL E Sbjct: 3 NKGLFISLEGIDGCGKTSVKEGLLQYFSK--FPVLSIREPGGTLISEKIREILLDEKNQE 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA ++AAAR VE +IRPAL++GKI+L DR+LDS+ AYQG FL +L Sbjct: 61 ITARTEAFLYAAARSQLVEELIRPALLQGKIVLADRYLDSTIAYQGYGRGLDLGFLTTLN 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + P T++LD+ G +R ++ D E++ + + R+ +L IA Sbjct: 121 QLCTSGLKPHLTLLLDIDPAEGQRR-------KKKDIPDRLEKEGIEFQSRVREGYLKIA 173 Query: 182 RNQPDRCHIVDSAHSFQSV---ATNILNIVW 209 R + +R ++D+ F+ V A + +W Sbjct: 174 RQESERIKLLDAGKDFKEVLQEAIEYIEDIW 204 >gi|237746052|ref|ZP_04576532.1| thymidylate kinase [Oxalobacter formigenes HOxBLS] gi|229377403|gb|EEO27494.1| thymidylate kinase [Oxalobacter formigenes HOxBLS] Length = 210 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK+THI + L+ KN V +TREPGGT E R +LL D+ Sbjct: 11 GRFITFEGIDGAGKSTHIDYVTGLLKAKNRQVVLTREPGGTGLGEKLREILLH---DKMT 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E EA++ AAR +H+ ++I PAL G+ +L DRF D+S+AYQG L L+ Sbjct: 68 PETEALLMFAARREHLADIIEPALRRGEWVLSDRFTDASFAYQGGGRGLAREKLRQLETW 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T + D+ DI R++ + D FER+ + R +L A+ Sbjct: 128 VHPHLQPDLTFLFDVSPDIAQTRLEA------ARSPDKFEREKADFFNRVRGEYLRRAKE 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R I+DS+ ++ + ++ +L Sbjct: 182 FPERFRIIDSSRPIAAIRETLKTLIGKL 209 >gi|169795088|ref|YP_001712881.1| thymidylate kinase [Acinetobacter baumannii AYE] gi|213158250|ref|YP_002320301.1| thymidylate kinase [Acinetobacter baumannii AB0057] gi|215482638|ref|YP_002324830.1| thymidylate kinase [Acinetobacter baumannii AB307-0294] gi|294836647|ref|ZP_06781330.1| thymidylate kinase [Acinetobacter sp. 6013113] gi|294860782|ref|ZP_06798551.1| thymidylate kinase [Acinetobacter sp. 6013150] gi|301345832|ref|ZP_07226573.1| thymidylate kinase [Acinetobacter baumannii AB056] gi|301512395|ref|ZP_07237632.1| thymidylate kinase [Acinetobacter baumannii AB058] gi|301594756|ref|ZP_07239764.1| thymidylate kinase [Acinetobacter baumannii AB059] gi|226732648|sp|B7GYE0|KTHY_ACIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732649|sp|B7I585|KTHY_ACIB5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487546|sp|B0VCV4|KTHY_ACIBY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169148015|emb|CAM85878.1| thymidylate kinase [Acinetobacter baumannii AYE] gi|213057410|gb|ACJ42312.1| thymidylate kinase [Acinetobacter baumannii AB0057] gi|213987116|gb|ACJ57415.1| thymidylate kinase [Acinetobacter baumannii AB307-0294] Length = 199 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 75/195 (38%), Positives = 111/195 (56%), Gaps = 12/195 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHNENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S + L D LQ + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---SGRGLSQDKLQLL 117 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V MP+ T LD P+++G+ R RE LD FE++ + K R+ + + Sbjct: 118 NQNFVSSMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSFFTKVREGYETLW 171 Query: 182 RNQPDRCHIVDSAHS 196 + +P+R +D+ S Sbjct: 172 KAEPERIKRLDATQS 186 >gi|269217490|ref|ZP_06161344.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332] gi|269213111|gb|EEZ79451.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332] Length = 210 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 116/212 (54%), Gaps = 16/212 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GKTT + LL +L+ + +DV TR+PGGT R +LL G + Sbjct: 1 MFITFEGGDGSGKTTQMQLLAEWLRGRGFDVVTTRDPGGTELGRHIRKLLLHGG--DVSP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AEA+++AA R +V V+RPAL G I+L DR++DSS AYQG + + L D ++ +S Sbjct: 59 RAEALLYAADRAHNVATVVRPALERGAIVLADRYIDSSAAYQG---AGRTLGEDEVRGLS 115 Query: 125 V---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + +MPD T+ LDLP + + R D E HE R+ +L A Sbjct: 116 LWGTEGLMPDLTVFLDLPAEA--------LASRLGGSFDRIEAAGARFHEDVRRAYLRFA 167 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P+R VD+ + +A + V E ++ Sbjct: 168 AAEPERWFTVDATVPRERIAETVRARVAEALE 199 >gi|320334977|ref|YP_004171688.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211] gi|319756266|gb|ADV68023.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211] Length = 209 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 11/206 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCG 58 M++GLFI+FEG EGAGK+T + L L +TREPGGTP R VLL + Sbjct: 1 MSAGLFITFEGPEGAGKSTQVRALTAHLAALGVPHTLTREPGGTPFGTRVRDVLLDPTLQ 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +D E ++++A+R V +VIRPAL G++++CDR+ DSS AYQG L Sbjct: 61 IDPL---PEFLLYSASRAQLVTDVIRPALARGEVVICDRYFDSSLAYQGGGRGLSSELLR 117 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + P T +LDL +GL RV R D ER D+ H + R FL Sbjct: 118 RITHEATGGLTPHLTFLLDLDPSVGLGRVAAR------GQPDRLERADLDFHTRVRARFL 171 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 D+A +P R ++D+ ++++ +I Sbjct: 172 DLAAAEPARFEVLDATRPQEALSAHI 197 >gi|229542305|ref|ZP_04431365.1| thymidylate kinase [Bacillus coagulans 36D1] gi|229326725|gb|EEN92400.1| thymidylate kinase [Bacillus coagulans 36D1] Length = 217 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 115/210 (54%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+ EG EGAGKTT ++ L+ Y V +TREPGG AE RH++L+ E Sbjct: 2 KGIFITAEGPEGAGKTTITGMIAAHLKENGYPVVLTREPGGIKIAEQIRHIILNPENTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA+R H+ + PAL +G+I+LCDRF+DSS AYQG + + + Sbjct: 62 DARTEALLYAASRRQHLAEKVLPALEQGRIVLCDRFIDSSLAYQGYARGIGIEEVYRINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T+ D+ + GL R+ ++ RE LD + + H K R+ F + + Sbjct: 122 FATGGLLPDLTLYFDVEAETGLSRIAKNHN-REVNRLDL---EAIDFHRKVREGFQILLK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R H +D+ + + L V + + Sbjct: 178 RFPERIHAIDANKEVEYIYHTALQKVLDAI 207 >gi|262375534|ref|ZP_06068767.1| thymidylate kinase [Acinetobacter lwoffii SH145] gi|262309788|gb|EEY90918.1| thymidylate kinase [Acinetobacter lwoffii SH145] Length = 199 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 111/205 (54%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKTT I + + DV +TREPGGTP AE R +LL+ +E A Sbjct: 1 MFISFEGTEGVGKTTLIRSIYEDFIAQGKDVILTREPGGTPMAEQIRSLLLAVNHEEAMA 60 Query: 65 -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H+ VI PAL GKI+LCDRF D+S+AYQ L L + Sbjct: 61 HDTELLLMYAARAQHLAQVILPALEAGKIVLCDRFSDASFAYQCAGRGLSETKLQLLNDH 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T L+ P+++G+ R RE LD FE++ V EK R + + + Sbjct: 121 FVAR-MPDITFWLEAPIELGMNRA------RERGALDRFEQEKVTFFEKVRAGYETLWQR 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+R +D+ + + V L+ + Sbjct: 174 HPERIKRLDATQTPEQVFEQALSYL 198 >gi|148244374|ref|YP_001219068.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA] gi|166223127|sp|A5CXH6|KTHY_VESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146326201|dbj|BAF61344.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA] Length = 205 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 116/207 (56%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ +G+EGAGK+T I + +L +KN +V +TREPGGT E R +LLS Sbjct: 1 MQRGKFITIDGVEGAGKSTQIDFICSYLAKKNINVVLTREPGGTKLGEKIRALLLSIDTQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR +H++ I PAL G +L DRF D+SYAYQG + L Sbjct: 61 LMDNDTELLLIFAARNEHIKTKIIPALNRGDWVLSDRFTDASYAYQGGGRGLSIERIALL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIF 177 ++ +Q+ PD T++LD+PV +G+ R+++R S ++ L D+F R R + Sbjct: 121 EQWVLQDFSPDVTLLLDVPVALGMLRIKSR-SRKDRIELETNDFFNRV--------RDSY 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 + ++ P+R ++D++ + + I Sbjct: 172 IKRSKQFPERIKLIDASQTLKETTQQI 198 >gi|59798343|sp|Q73FS2|KTHY_WOLPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 196 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 15/189 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL + R +V +TREPGGT AE R VLL+ +D Sbjct: 1 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 61 ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 118 L-VEIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167 Query: 183 NQPDRCHIV 191 +P RC ++ Sbjct: 168 KEPVRCSVI 176 >gi|224369769|ref|YP_002603933.1| Tmk [Desulfobacterium autotrophicum HRM2] gi|259494266|sp|C0QI33|KTHY_DESAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|223692486|gb|ACN15769.1| Tmk [Desulfobacterium autotrophicum HRM2] Length = 227 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEG+GKTT I L L + Y+ VTREPG T + R +LL G Sbjct: 1 MFITLEGIEGSGKTTQIKPLVDCLGQNGYEAVVTREPGATVIGKKIRAILLDPGNSGMSD 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A R H+ VI PAL GK ++CDRF D++ YQG +D + + Sbjct: 61 LCELFLYGADRAQHLSEVIIPALGAGKTVVCDRFTDATTVYQGAARGISKELIDIIHSVV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182 V+++ PD TI+ DL + GL R + E LD FER+ + HE+ RQ +L +A Sbjct: 121 VKDLCPDLTILFDLDPETGLARTVKALTDGERT-LDESRFERETLEFHERVRQGYLALAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206 + DR +VD+ + + V T I++ Sbjct: 180 AEQDRFLVVDARGTQEQVFTEIVS 203 >gi|58584408|ref|YP_197981.1| thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75498064|sp|Q5GTD5|KTHY_WOLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58418724|gb|AAW70739.1| Thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 205 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 15/189 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKT LL + ++ ++ +TREPGGT AE R +LL +D Sbjct: 1 MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLKDSIDPV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +HV+ VI PAL +GKI++CDRF+DS+ AYQG + L + Sbjct: 61 ---SELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V IGL R ++ + +E ++ + K R+ F +IA Sbjct: 118 L-VKIKYPDTTFILDIDVQIGLSRAMDK---------NKYEEMNISFYNKVRKGFQEIAI 167 Query: 183 NQPDRCHIV 191 N+PDRC I+ Sbjct: 168 NEPDRCSII 176 >gi|99034767|ref|ZP_01314692.1| hypothetical protein Wendoof_01000490 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 196 Score = 127 bits (320), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 15/194 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL + R +V +TREPGGT AE R VLL+ +D Sbjct: 1 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 61 ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 118 L-VEIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167 Query: 183 NQPDRCHIVDSAHS 196 +P RC ++ + Sbjct: 168 KEPVRCSVITGIET 181 >gi|307265699|ref|ZP_07547252.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919343|gb|EFN49564.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1] Length = 203 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEGI+G GKTT I L+ +L ++ Y++ V REPGGT E R +LL + Sbjct: 3 GKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFIS 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++A++R VE I PAL +G+I++ DRF+DSSY YQG + + EI Sbjct: 62 PVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNEI 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD TI +D+ + +KR R + D E++ H+K R+ ++ + + Sbjct: 122 ATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLEKESWEFHKKVREGYIKLVKE 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P R +D V +I+++V Sbjct: 175 FPKRFVFIDGMQELMKVHQDIIDVV 199 >gi|326389200|ref|ZP_08210768.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] gi|325994563|gb|EGD52987.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] Length = 203 Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEGI+G GKTT I L+ +L ++ Y++ V REPGGT E R +LL + Sbjct: 3 GKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFIS 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++A++R VE I PAL +G+I++ DRF+DSSY YQG + + EI Sbjct: 62 PVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNEI 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD TI +D+ + +KR R + D E++ H+K R+ ++ + + Sbjct: 122 ATMGILPDVTIYIDITPEEAMKRRGKREA-------DRLEKESWGFHKKVREGYIKLVKE 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P R +D V +I+++V Sbjct: 175 FPKRFVFIDGMQELMKVHQDIIDVV 199 >gi|170017863|ref|YP_001728782.1| thymidylate kinase [Leuconostoc citreum KM20] gi|238688934|sp|B1MVT4|KTHY_LEUCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169804720|gb|ACA83338.1| Thymidylate kinase [Leuconostoc citreum KM20] Length = 214 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/220 (35%), Positives = 122/220 (55%), Gaps = 13/220 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ + L L+ D VT REPGG P +EA R +L Sbjct: 1 MTRPLFITFEGPEGAGKTSVLEALVSELKPILGDQLVTTREPGGNPISEAIRQILQPEDD 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++AAAR H+ I PAL GK+L+ DR++DSS AYQG + L +D+ Sbjct: 61 NGMDDRTEALLYAAARRQHIVETILPALSAGKVLISDRYVDSSLAYQG---GGRDLGVDN 117 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQ 175 + +I ++ ++PD TI D+P ++GL RV NR +D +++ + H++ R Sbjct: 118 IWQINQFAIDGLLPDLTIYFDVPSELGLSRVMANR-----QGKIDRLDKESLSFHQRVRT 172 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++ + DR I+D+ V ++ ++ E + R Sbjct: 173 TYLELQHDFSDRIKIIDATQPLTDVISDTRALLQEALNSR 212 >gi|42521048|ref|NP_966963.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410789|gb|AAS14897.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 212 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 15/194 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL + R +V +TREPGGT AE R VLL+ +D Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 77 ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 L-VEIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIVDSAHS 196 +P RC ++ + Sbjct: 184 KEPVRCSVITGIET 197 >gi|326316632|ref|YP_004234304.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373468|gb|ADX45737.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 221 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 17/213 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK++HI + L+R V VTREPGGTP AE R +LL+ +D Sbjct: 5 GWFITFEGIDGAGKSSHIEAVAEALRRGGRTVTVTREPGGTPLAETLRALLLNEAMD--- 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E++V A R DH+ +VI PAL+ G+++LCDRF D+++AYQG L L+ I Sbjct: 62 ALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLERI 121 Query: 124 S---VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + +QE + P T+ DL D+ R++ + D FE + V + Q Sbjct: 122 TQSGLQEGSDAILHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRVAQ 175 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + D A P R +D+ ++V +++I+ Sbjct: 176 GYADRAAADPGRFARLDADQPREAVRAQLMDIL 208 >gi|257091001|ref|ZP_05585362.1| thymidylate kinase [Enterococcus faecalis CH188] gi|312902587|ref|ZP_07761793.1| thymidylate kinase [Enterococcus faecalis TX0635] gi|256999813|gb|EEU86333.1| thymidylate kinase [Enterococcus faecalis CH188] gi|310634257|gb|EFQ17540.1| thymidylate kinase [Enterococcus faecalis TX0635] gi|315162072|gb|EFU06089.1| thymidylate kinase [Enterococcus faecalis TX0645] gi|315579603|gb|EFU91794.1| thymidylate kinase [Enterococcus faecalis TX0630] Length = 212 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 113/209 (54%), Gaps = 7/209 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +GAGKT+ + + +R + + TREPGG P AE R V+L D Sbjct: 3 GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + + S+ Sbjct: 63 DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIVPIASINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q NR + +D + + + H++ R +L +A Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|20806623|ref|NP_621794.1| thymidylate kinase [Thermoanaerobacter tengcongensis MB4] gi|23821773|sp|Q8RDE6|KTHY_THETN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|20515069|gb|AAM23398.1| Thymidylate kinase [Thermoanaerobacter tengcongensis MB4] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 14/213 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEGI+G GKTT + LL+ L+++ YD+ V REPGGT E R +LL F Sbjct: 3 GKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLDRENLIFP 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-- 121 E +++A++R VE I PAL +G++++ DRF+DSSY YQG ++ L L+ ++ Sbjct: 63 V-TEMLLYASSRAQLVEEKILPALSKGQMVIVDRFIDSSYVYQG---YARGLGLEKVKIV 118 Query: 122 -EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 EI+ + + PD T+ +D+ + +KR Q + + D E +D H+K R+ +L + Sbjct: 119 NEIATKGLFPDITVYIDITPEEAIKRRQGKKA-------DRLEGEDYEFHKKVREGYLRL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ P+R ++D +V ++ V E ++ Sbjct: 172 VKDFPERFILIDGMQEVLAVHKMVVKAVEEYLK 204 >gi|225677081|ref|ZP_03788085.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590877|gb|EEH12100.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 212 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 112/194 (57%), Gaps = 15/194 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL + R +V +TREPGGT AE R VLL+ +D Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 77 ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIGDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 L-VEIECPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIVDSAHS 196 +P RC ++ + Sbjct: 184 KEPVRCSVITGIET 197 >gi|162446997|ref|YP_001620129.1| thymidylate kinase [Acholeplasma laidlawii PG-8A] gi|189028826|sp|A9NEH3|KTHY_ACHLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|161985104|gb|ABX80753.1| thymidylate kinase [Acholeplasma laidlawii PG-8A] Length = 201 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 13/206 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG+GKTT I LK L K YDV TREPGG+ AE R VLL E A Sbjct: 1 MFITFEGGEGSGKTTLIEKLKHTLLEKKYDVLTTREPGGSKVAEKIRSVLLDNKNTEITA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA+R H++ VI P L K++LCDR++DSSYAYQ + F+ S+ + Sbjct: 61 HTEALLFAASRAQHLDEVIIPNL--DKVILCDRYIDSSYAYQAFGRNLGMEFVQSINSYA 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ +PD T +DL G+ RV +NR L ++ LD + H+K R+ ++ I+ Sbjct: 119 LK-YLPDLTFYIDLDPKTGIDRVKKNR--LHKTDRLDMEVQ---TFHQKVREGYIRISEM 172 Query: 184 QPDRCHIVDSAHS----FQSVATNIL 205 +R ++D S +Q + NIL Sbjct: 173 FKERIVVIDGNQSIDAIYQIIMDNIL 198 >gi|254462931|ref|ZP_05076347.1| thymidylate kinase [Rhodobacterales bacterium HTCC2083] gi|206679520|gb|EDZ44007.1| thymidylate kinase [Rhodobacteraceae bacterium HTCC2083] Length = 209 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 113/206 (54%), Gaps = 6/206 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FISFEGI+G+GK+T L L+ ++V +TREPGG+ AE R ++L D + Sbjct: 5 TGRFISFEGIDGSGKSTQAKRLAAALEADGFEVVLTREPGGSAGAEEIRALVLQGEPDRW 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L Sbjct: 65 SAETEILLFTAARRDHMERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRALVDQLHA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++ D+ D+ R R S+ FE + + R FL++A Sbjct: 125 LMIGR-EPDLTLLFDMDPDVSHARAVERDSIDS-----RFENFGASLQKAMRSGFLELAA 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R IV++A ++A + L+++ Sbjct: 179 AAPKRFRIVNAARDIDAIAADTLSVI 204 >gi|261403890|ref|YP_003240131.1| thymidylate kinase [Paenibacillus sp. Y412MC10] gi|261280353|gb|ACX62324.1| thymidylate kinase [Paenibacillus sp. Y412MC10] Length = 214 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/192 (38%), Positives = 107/192 (55%), Gaps = 4/192 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ EG EG+GKTT + L F+Q + +TREPGG AE R ++L A Sbjct: 7 LFITVEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIDIAEKIRSIILDPEHTAMDA 66 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AAAR H+ + PAL +G +LCDRF+DSS YQG + S+ + + Sbjct: 67 RTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVWSINQFA 126 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++ D+ IGL R+ RE LD +++ HEK R+ +L +A Sbjct: 127 IDTRMPDLTLLFDIEPRIGLSRIAANAE-REWNRLDM---ENLTFHEKVREGYLLVAERN 182 Query: 185 PDRCHIVDSAHS 196 PDR IVD++ + Sbjct: 183 PDRIRIVDASKT 194 >gi|32034665|ref|ZP_00134803.1| COG0125: Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209279|ref|YP_001054504.1| thymidylate kinase [Actinobacillus pleuropneumoniae L20] gi|165977254|ref|YP_001652847.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151172|ref|YP_001969697.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252694|ref|ZP_07338856.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246746|ref|ZP_07528815.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248888|ref|ZP_07530899.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307255731|ref|ZP_07537534.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257916|ref|ZP_07539670.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260183|ref|ZP_07541892.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262310|ref|ZP_07543958.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264521|ref|ZP_07546105.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|229487547|sp|A3N3B3|KTHY_ACTP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687523|sp|B0BSY9|KTHY_ACTPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238692362|sp|B3GZ69|KTHY_ACTP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|126098071|gb|ABN74899.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877355|gb|ABY70403.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916303|gb|ACE62555.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648433|gb|EFL78627.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306852352|gb|EFM84588.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854583|gb|EFM86775.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306861291|gb|EFM93282.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863563|gb|EFM95492.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865728|gb|EFM97607.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867973|gb|EFM99801.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870120|gb|EFN01880.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 118/208 (56%), Gaps = 13/208 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGKTT ++ L++ +V TREPGGTP AE RH++ + Sbjct: 3 GKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQTREPGGTPLAEKLRHLIKHETEEAVS 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQ G R +HL L++L+E Sbjct: 63 DKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHL-LETLKE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + PD TI LD+ +GL R + R L E LD+F R RQ +L++ Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGRGELDRIEQQSLDFFYRT--------RQRYLEL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +N ++ I+++ S + VA +I V Sbjct: 174 TQNN-EKAVIINAEQSIEQVAADIQQAV 200 >gi|320526760|ref|ZP_08027950.1| thymidylate kinase [Solobacterium moorei F0204] gi|320132728|gb|EFW25268.1| thymidylate kinase [Solobacterium moorei F0204] Length = 211 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 117/215 (54%), Gaps = 11/215 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+FEG +G+GKTT + + L+ Y V TREPGG+ AE RHV+L Sbjct: 1 MKTGLFITFEGPDGSGKTTVSTAVTNMLEADGYQVRYTREPGGSNIAEQIRHVILDPKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A EA+++AA+R H+ + + P L +G ++ DRF+DSS AYQG + + +D + Sbjct: 61 EMDARTEALLYAASRRQHLIDKVLPVLEQGVHVISDRFVDSSLAYQG---CGREIGMDEV 117 Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 EI +++ MPD TI L + + GLKR+ + LD +++ V H++ + + Sbjct: 118 YEINQFAIENHMPDKTIFLQIDAETGLKRIH-----KGREVLDRLDQESVEFHQRVHEGY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + DR IVD+ +V IV L+ Sbjct: 173 QKVIEKYADRMIIVDATADVDTVIQKSYEIVKGLL 207 >gi|254479299|ref|ZP_05092640.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653] gi|214034774|gb|EEB75507.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653] Length = 208 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 123/213 (57%), Gaps = 14/213 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEGI+G GKTT + LL+ L+++ YD+ V REPGGT E R +LL F Sbjct: 3 GKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLDRENLIFP 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-- 121 E +++A++R VE I PAL +G++++ DRF+DSSY YQG ++ L L+ ++ Sbjct: 63 V-TEMLLYASSRAQLVEEKILPALSKGQMVIVDRFVDSSYVYQG---YARGLGLEKVKIV 118 Query: 122 -EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 EI+ + + PD T+ +D+ + +KR Q + + D E +D H+K R+ +L + Sbjct: 119 NEIATKGLFPDITVYIDITPEEAIKRRQGKKA-------DRLEGEDYEFHKKVREGYLRL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ P+R ++D +V ++ V E ++ Sbjct: 172 VKDFPERFVLIDGMQEVLAVHKMVVKAVEEYLK 204 >gi|11991874|gb|AAG42374.1|AF294440_6 thymidylate kinase [Xanthomonas albilineans] Length = 226 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 109/200 (54%), Gaps = 19/200 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-------SCG 58 F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE R +LL Sbjct: 11 FVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDMAPSSPETA 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 V+ AE E ++ AAR HV VIRPAL G ++ DRF DSSYAYQGE ++ Sbjct: 71 VERLSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWIA 130 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQ 175 L+ +V + P T++LDL V IG R R + R ES D+F+R R Sbjct: 131 DLERRAVG-LQPGLTLLLDLDVQIGRARTSGRDLWPDRIESEQDDFFQRV--------RA 181 Query: 176 IFLDIARNQPDRCHIVDSAH 195 F A P R ++D++ Sbjct: 182 GFRQRATQDPQRFRVIDASQ 201 >gi|296116333|ref|ZP_06834949.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769] gi|295977152|gb|EFG83914.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769] Length = 224 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 84/218 (38%), Positives = 118/218 (54%), Gaps = 17/218 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +GLFI+FEG EGAGK+T + LL+ L + + TREPGGTP AEA R LL G Sbjct: 10 TGLFITFEGGEGAGKSTQVRLLQEHLATIMPSDRIVRTREPGGTPGAEAVRDFLL-FGEH 68 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119 + AE ++ AR DHV+ +IRPAL GK+++ DRF DS+ AYQG R LD Sbjct: 69 DLSLRAETLMHFGARYDHVDRLIRPALEAGKVVISDRFTDSTAAYQGYGRGMGDPAILDL 128 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + Q PD T ILD+P + +R++ R + D +E H + + F Sbjct: 129 IASLRQQTGARPDMTFILDVPRAMARERLRARGNR-----PDRYETAAEAFHARVAEGFA 183 Query: 179 DIARNQPDRCHIVDSAHS----FQSVATNI---LNIVW 209 IAR +P RC +D+A Q+VA ++ L + W Sbjct: 184 AIARQEPGRCITLDAAQPPDIVAQAVARHVATRLPMSW 221 >gi|239998426|ref|ZP_04718350.1| thymidylate kinase [Neisseria gonorrhoeae 35/02] gi|268594287|ref|ZP_06128454.1| thymidylate kinase [Neisseria gonorrhoeae 35/02] gi|268547676|gb|EEZ43094.1| thymidylate kinase [Neisseria gonorrhoeae 35/02] gi|317163711|gb|ADV07252.1| thymidylate kinase [Neisseria gonorrhoeae TCDC-NG08107] Length = 206 Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+G GK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGVGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---AREK---DRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS S V +I ++ Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200 >gi|157956091|gb|ABW06433.1| thymidylate kinase [Wheat blue dwarf phytoplasma] Length = 207 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 7/210 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EGAGKTTH L L +K Y +T+EPGGT E R++LL + Sbjct: 1 MFISFEGCEGAGKTTHSRYLFEKLSKK-YSCVLTKEPGGTLFNEVIRNILLHSSNKQIDF 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA R +H+ +I PAL + KI++CDR+LDS+ AYQG F+ ++ + Sbjct: 60 HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQGYARGLSQDFVLNINNFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IARN 183 + MP+ T LDL IG++RV+ ++ +E ++ F+ + + H+K R+ +LD + ++ Sbjct: 120 I-NYMPNITFYLDLDPKIGIQRVK-QFRPKE---INSFDLQKLSFHKKVRKGYLDLLQKD 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 Q R ++D++ + + I + E+ Q Sbjct: 175 QQKRIFLIDASKRLEVIYNIIEQKLKEVFQ 204 >gi|118444724|ref|YP_879227.1| thymidylate kinase [Clostridium novyi NT] gi|171472994|sp|A0Q3M5|KTHY_CLONN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118135180|gb|ABK62224.1| thymidylate kinase [Clostridium novyi NT] Length = 205 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 118/203 (58%), Gaps = 10/203 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G FI+ EG EG+GKTT + +++++L N + TREPGG +E R V+L+ Sbjct: 1 MNKGAFITLEGPEGSGKTTIVKMIEKYLSENNIEYISTREPGGINISEQIRDVILNKDNV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 A EA+++ A+R H+ + PA+ EGK+++CDRF+DSS AYQG ++ + +D Sbjct: 61 AMDARTEALLYVASRRQHLAERVIPAIKEGKVVICDRFIDSSLAYQG---YARGIGIDEV 117 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ E ++ MPD T+ LD+ ++GLKR+ ++ + RE LD E D H+K R+ + Sbjct: 118 MAINEFAIDGYMPDLTLYLDIEPEVGLKRI-SKNNEREVNRLD-LEALD--FHKKVREGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSV 200 + P+R +++ V Sbjct: 174 FKLLEKYPNRIKKINANQPVDKV 196 >gi|325203757|gb|ADY99210.1| thymidylate kinase [Neisseria meningitidis M01-240355] Length = 206 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP E R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS + V +I ++ Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200 >gi|295698602|ref|YP_003603257.1| thymidylate kinase [Candidatus Riesia pediculicola USDA] gi|291157415|gb|ADD79860.1| thymidylate kinase [Candidatus Riesia pediculicola USDA] Length = 217 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 115/200 (57%), Gaps = 6/200 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G +I EG+EG+GKTT I +K+ L ++ +D+ REPGGTP +E R ++ +E Sbjct: 6 NFGRYIVVEGLEGSGKTTMIGFVKKMLIKEGFDILTVREPGGTPISEKIRKLIKKNFPEE 65 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + E +F AAR+ +EN+I P L GK ++ DR SSYAYQG + + +D + Sbjct: 66 KFLVKTELFMFYAARIQLMENIILPNLKSGKWVIGDRNFLSSYAYQGGKYGVKDDEIDKI 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I++ + PD I LD+ +IG+ R+ R+S+ LD E++ + + R +L+I Sbjct: 126 NKIAIGKFQPDLIIYLDVFPEIGISRIHE----RKSSKLDRIEKRSLDFFHQVRNRYLNI 181 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 +NQ + I+D+ SV Sbjct: 182 IKNQKE-FMIIDANQDLSSV 200 >gi|170780642|ref|YP_001708974.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus] gi|189028830|sp|B0RAE3|KTHY_CLAMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169155210|emb|CAQ00311.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus] Length = 211 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 12/205 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+FI+ EG +G GK+T +LL+ +L+ + ++V VTREPGG+ + R ++L Sbjct: 2 TGVFITLEGGDGVGKSTQSALLREWLEEQGHEVVVTREPGGSDLGQEIREIVLHR-RGHI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R HVE V+RPAL G ++L DR+LDSS AYQG + L Sbjct: 61 APRAEALLYAADRAHHVETVVRPALERGAVVLQDRYLDSSVAYQGAGRVLDAAEIRDLSL 120 Query: 123 ISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + Q ++PD T++LDL I L + R+ E+ ER D HE+ RQ FL Sbjct: 121 WAAQGLLPDLTVLLDLDQAAARIRLDAARTRFDRLEA------ERAD--FHERVRQAFLG 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A +P+R +VD+ + +A I Sbjct: 173 LAAAEPERFLVVDAGWPREVIAAEI 197 >gi|212716794|ref|ZP_03324922.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM 16992] gi|212660498|gb|EEB21073.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM 16992] Length = 217 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/220 (36%), Positives = 124/220 (56%), Gaps = 19/220 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+FISFEGI+G GKTT + L+ +++ + + VTREPGGT A R +LL GV+ Sbjct: 3 GIFISFEGIDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLG-GVEGSD 61 Query: 61 -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV VIRPAL G +++ DR+LDSS AYQ + L Sbjct: 62 ADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQA---GGRELTAGE 118 Query: 120 LQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++++S+ E++P+ T +LDL R+Q+ ESA D+ R RQ Sbjct: 119 IRDLSMWATCELLPNRTYLLDLDPVQSHARLQHDEDRMESAGNDFQRRT--------RQA 170 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 FLD+A+ + R ++D++ S V ++I + ++ Q + Sbjct: 171 FLDLAKAESQRFRVIDASQSIDEVWSHIQDDFAQISQTKT 210 >gi|88856427|ref|ZP_01131085.1| thymidylate kinase [marine actinobacterium PHSC20C1] gi|88814294|gb|EAR24158.1| thymidylate kinase [marine actinobacterium PHSC20C1] Length = 209 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 116/207 (56%), Gaps = 18/207 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +GAGKTT LL +L+ + V VTREPGGT R ++L D Sbjct: 3 GLFITLEGGDGAGKTTQSKLLVHWLEEAGHTVVVTREPGGTDLGVELREIVLHRRGD-MD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R H+ V+RPAL G I++ DR++DSS AYQG + + L + ++++ Sbjct: 62 PRAEALIYAADRAHHIATVVRPALERGDIVVQDRYIDSSEAYQG---AGRVLGAEEVRDL 118 Query: 124 SV---QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ Q ++PD T++LDL G KR+ + RY D E + H + R F Sbjct: 119 SLWATQSLLPDVTVLLDLDPTDGRKRLDSARTRY--------DRLEAEKQEFHTRVRDAF 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L+ A +PDR +VD+A +A I Sbjct: 171 LERAAKEPDRILVVDAARDVAEIAAAI 197 >gi|256833407|ref|YP_003162134.1| thymidylate kinase [Jonesia denitrificans DSM 20603] gi|256686938|gb|ACV09831.1| thymidylate kinase [Jonesia denitrificans DSM 20603] Length = 221 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 117/217 (53%), Gaps = 11/217 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++GLF++FEG +G+GKTT L ++L +D +TREPGGT + R +LL D Sbjct: 8 HAGLFLTFEGGDGSGKTTQARLAAQWLSDTYAHDALLTREPGGTELGQHIRQLLLHG--D 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + G AEA+++AA R HV VIRPAL G+ ++CDR+ DSS AYQG + + L Sbjct: 66 DMGPRAEALLYAADRSHHVHTVIRPALSLGRTVVCDRYFDSSIAYQGGGRTLTPKTIRDL 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V ++PD T+++D+P +G R RE D ER H+ + + Sbjct: 126 SLWAVDGLIPDLTVLIDVPARVGAAR-------REGEP-DRLERAGDDFHDTTHATYRHL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A +P+R IVD + VA + + + + RV+ Sbjct: 178 AEQEPERWVIVDGIGTIDEVAGRVRAALVDRLGARVT 214 >gi|163847788|ref|YP_001635832.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl] gi|222525656|ref|YP_002570127.1| dTMP kinase [Chloroflexus sp. Y-400-fl] gi|163669077|gb|ABY35443.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl] gi|222449535|gb|ACM53801.1| dTMP kinase [Chloroflexus sp. Y-400-fl] Length = 226 Score = 127 bits (318), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 12/230 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T L LQ Y +TREPGGT +E R +L+ Sbjct: 1 MKQGFFITFEGPEGAGKSTQARRLYERLQSIGYPTILTREPGGTRISELIRRILVDLRHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++F+AAR V +IRP L G I++CDR+ DS++AYQG L ++ Sbjct: 61 EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRTI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDVMIHEKRRQ 175 +I+ + PD T+ L + V++GL+R + E + + + +D+ H++ Q Sbjct: 121 TDIATGGLKPDLTLYLRIDVEVGLQRKRASRERIEPGSVQPPEWNRLDARDLAYHQRVAQ 180 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR---VSPLSSK 222 F ++ +P+R + +D+ +A I W++V R V PL+++ Sbjct: 181 GFNELMAQEPERWYALDADQPVDELAEQI----WQVVMARLAQVMPLAAQ 226 >gi|323140332|ref|ZP_08075264.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067] gi|322415190|gb|EFY05977.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067] Length = 211 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGKTT L + L+ + YDV +REPGGT AE R ++L + Sbjct: 3 GFFITFEGIDGAGKTTQQHLAAQALREQGYDVLESREPGGTQLAEKVRALVLDPELP-LT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSL 120 + +++ AAR +HV+ ++RPAL GKI++CDRF DS+ YQG + + L L Sbjct: 62 TATQTLLYLAARSEHVDKLLRPALEAGKIIICDRFNDSTLVYQGLAQGKAPEEIAQLRRL 121 Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + PD T++ D P ++ L R Q R D +E++ + ++ R FL Sbjct: 122 GAFATGGLEPDLTLVFDADPAEL-LARRQQR------GVQDRYEQQGLEFQQRLRAGFLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A +P R ++D+ + Q V +L ++ ++ Sbjct: 175 LAEAEPQRLQVIDALGTQQEVTAKVLQVIGRVI 207 >gi|29840268|ref|NP_829374.1| thymidylate kinase [Chlamydophila caviae GPIC] gi|34222665|sp|Q823B7|KTHY_CHLCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|29834616|gb|AAP05252.1| thymidylate kinase [Chlamydophila caviae GPIC] Length = 207 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + V TREPGG+P E R ++L Sbjct: 1 MFIVIEGCEGSGKSSLTELLKDRLIAEGKAVVATREPGGSPLGERVRDLILEPSTPSISP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 E +F AAR +H+ I PAL G I++CDRF DS+ YQG + ++ SL Sbjct: 61 YTELFLFLAARAEHITKKIFPALESGNIVICDRFHDSTIVYQGIAEGLGKEYVTSLCHHV 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ +PD T +LD+P D GL+R Q + S LD FE K + H K R+ FL +A Sbjct: 121 VGEKKFLPDLTCLLDIPADEGLRRKQQQKS------LDKFEDKPLAYHTKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+ I+D + ++ EL Sbjct: 175 AHPNSYLILDGRQPLEESLNKVMTAYTEL 203 >gi|254361189|ref|ZP_04977333.1| dTMP kinase [Mannheimia haemolytica PHL213] gi|261492947|ref|ZP_05989492.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495090|ref|ZP_05991556.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092680|gb|EDN73729.1| dTMP kinase [Mannheimia haemolytica PHL213] gi|261309256|gb|EEY10493.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311399|gb|EEY12557.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 206 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 85/209 (40%), Positives = 119/209 (56%), Gaps = 14/209 (6%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGKTT H +LK Q DV +TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGTPLAEKLRHLIKHETEEAI 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQ G R +HL L++L+ Sbjct: 63 NDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRKLDRHL-LETLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 E + PD TI LDL IGL+R + R L E LD+F R R+ +L+ Sbjct: 122 ESVLGTFEPDLTIYLDLDPVIGLERARGRGELDRIEQQSLDFFYRT--------RERYLE 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ D+ I+++ + V +I ++ Sbjct: 174 LTQHN-DKAVIINAEQPIEQVTADIQQVI 201 >gi|330444525|ref|YP_004377511.1| thymidylate kinase [Chlamydophila pecorum E58] gi|328807635|gb|AEB41808.1| thymidylate kinase [Chlamydophila pecorum E58] Length = 206 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 10/205 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT+ +L + L + + +TREPGG P E R ++L + Sbjct: 1 MFIVLEGGEGAGKTSLAEMLHQKLVSEGRSIVMTREPGGCPLGERIRELILQASETKVSQ 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 E +F A R H++ I PAL G I+LC+RF DS+ YQG + F+ L Q Sbjct: 61 YTELFLFLATRAQHIQETIIPALERGDIVLCERFHDSTIVYQGIAEGLGMSFVSDLCYQA 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I + +PD ++LD+P +IGL R VQ + LD FE+ + HE R FL +A Sbjct: 121 IGPKPFLPDLVVLLDVPAEIGLSRKVQQK-------TLDKFEKNPLSYHEAIRSGFLALA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206 PDR I+D+ S + +L Sbjct: 174 NANPDRYLILDARQSLEESVKKVLQ 198 >gi|29377238|ref|NP_816392.1| thymidylate kinase [Enterococcus faecalis V583] gi|227554247|ref|ZP_03984294.1| thymidylate kinase [Enterococcus faecalis HH22] gi|229549121|ref|ZP_04437846.1| thymidylate kinase [Enterococcus faecalis ATCC 29200] gi|255971839|ref|ZP_05422425.1| thymidylate kinase [Enterococcus faecalis T1] gi|255974836|ref|ZP_05425422.1| thymidylate kinase [Enterococcus faecalis T2] gi|256763385|ref|ZP_05503965.1| thymidylate kinase [Enterococcus faecalis T3] gi|256854059|ref|ZP_05559424.1| thymidylate kinase [Enterococcus faecalis T8] gi|256957990|ref|ZP_05562161.1| thymidylate kinase [Enterococcus faecalis DS5] gi|256960991|ref|ZP_05565162.1| thymidylate kinase [Enterococcus faecalis Merz96] gi|256963867|ref|ZP_05568038.1| thymidylate kinase [Enterococcus faecalis HIP11704] gi|257079927|ref|ZP_05574288.1| thymidylate kinase [Enterococcus faecalis JH1] gi|257081675|ref|ZP_05576036.1| thymidylate kinase [Enterococcus faecalis E1Sol] gi|257084272|ref|ZP_05578633.1| thymidylate kinase [Enterococcus faecalis Fly1] gi|257087729|ref|ZP_05582090.1| thymidylate kinase [Enterococcus faecalis D6] gi|257416932|ref|ZP_05593926.1| thymidylate kinase [Enterococcus faecalis AR01/DG] gi|257420151|ref|ZP_05597145.1| thymidylate kinase [Enterococcus faecalis T11] gi|257421627|ref|ZP_05598617.1| thymidylate kinase [Enterococcus faecalis X98] gi|293384623|ref|ZP_06630488.1| dTMP kinase [Enterococcus faecalis R712] gi|293386762|ref|ZP_06631333.1| dTMP kinase [Enterococcus faecalis S613] gi|294779714|ref|ZP_06745102.1| dTMP kinase [Enterococcus faecalis PC1.1] gi|300860317|ref|ZP_07106404.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11] gi|307269207|ref|ZP_07550561.1| thymidylate kinase [Enterococcus faecalis TX4248] gi|307271815|ref|ZP_07553086.1| thymidylate kinase [Enterococcus faecalis TX0855] gi|307277000|ref|ZP_07558110.1| thymidylate kinase [Enterococcus faecalis TX2134] gi|307278693|ref|ZP_07559761.1| thymidylate kinase [Enterococcus faecalis TX0860] gi|307290232|ref|ZP_07570148.1| thymidylate kinase [Enterococcus faecalis TX0411] gi|312900123|ref|ZP_07759439.1| thymidylate kinase [Enterococcus faecalis TX0470] gi|312906447|ref|ZP_07765455.1| thymidylate kinase [Enterococcus faecalis DAPTO 512] gi|312951938|ref|ZP_07770826.1| thymidylate kinase [Enterococcus faecalis TX0102] gi|312979395|ref|ZP_07791083.1| thymidylate kinase [Enterococcus faecalis DAPTO 516] gi|46576515|sp|Q830L6|KTHY_ENTFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|29344704|gb|AAO82462.1| thymidylate kinase [Enterococcus faecalis V583] gi|227176607|gb|EEI57579.1| thymidylate kinase [Enterococcus faecalis HH22] gi|229305746|gb|EEN71742.1| thymidylate kinase [Enterococcus faecalis ATCC 29200] gi|255962857|gb|EET95333.1| thymidylate kinase [Enterococcus faecalis T1] gi|255967708|gb|EET98330.1| thymidylate kinase [Enterococcus faecalis T2] gi|256684636|gb|EEU24331.1| thymidylate kinase [Enterococcus faecalis T3] gi|256711002|gb|EEU26045.1| thymidylate kinase [Enterococcus faecalis T8] gi|256948486|gb|EEU65118.1| thymidylate kinase [Enterococcus faecalis DS5] gi|256951487|gb|EEU68119.1| thymidylate kinase [Enterococcus faecalis Merz96] gi|256954363|gb|EEU70995.1| thymidylate kinase [Enterococcus faecalis HIP11704] gi|256987957|gb|EEU75259.1| thymidylate kinase [Enterococcus faecalis JH1] gi|256989705|gb|EEU77007.1| thymidylate kinase [Enterococcus faecalis E1Sol] gi|256992302|gb|EEU79604.1| thymidylate kinase [Enterococcus faecalis Fly1] gi|256995759|gb|EEU83061.1| thymidylate kinase [Enterococcus faecalis D6] gi|257158760|gb|EEU88720.1| thymidylate kinase [Enterococcus faecalis ARO1/DG] gi|257161979|gb|EEU91939.1| thymidylate kinase [Enterococcus faecalis T11] gi|257163451|gb|EEU93411.1| thymidylate kinase [Enterococcus faecalis X98] gi|291078081|gb|EFE15445.1| dTMP kinase [Enterococcus faecalis R712] gi|291083765|gb|EFE20728.1| dTMP kinase [Enterococcus faecalis S613] gi|294453205|gb|EFG21619.1| dTMP kinase [Enterococcus faecalis PC1.1] gi|300849356|gb|EFK77106.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11] gi|306498653|gb|EFM68154.1| thymidylate kinase [Enterococcus faecalis TX0411] gi|306504633|gb|EFM73835.1| thymidylate kinase [Enterococcus faecalis TX0860] gi|306506423|gb|EFM75583.1| thymidylate kinase [Enterococcus faecalis TX2134] gi|306511693|gb|EFM80692.1| thymidylate kinase [Enterococcus faecalis TX0855] gi|306514426|gb|EFM82987.1| thymidylate kinase [Enterococcus faecalis TX4248] gi|310627601|gb|EFQ10884.1| thymidylate kinase [Enterococcus faecalis DAPTO 512] gi|310630127|gb|EFQ13410.1| thymidylate kinase [Enterococcus faecalis TX0102] gi|311287766|gb|EFQ66322.1| thymidylate kinase [Enterococcus faecalis DAPTO 516] gi|311292758|gb|EFQ71314.1| thymidylate kinase [Enterococcus faecalis TX0470] gi|315025470|gb|EFT37402.1| thymidylate kinase [Enterococcus faecalis TX2137] gi|315030416|gb|EFT42348.1| thymidylate kinase [Enterococcus faecalis TX4000] gi|315035135|gb|EFT47067.1| thymidylate kinase [Enterococcus faecalis TX0027] gi|315148725|gb|EFT92741.1| thymidylate kinase [Enterococcus faecalis TX4244] gi|315151798|gb|EFT95814.1| thymidylate kinase [Enterococcus faecalis TX0012] gi|315154273|gb|EFT98289.1| thymidylate kinase [Enterococcus faecalis TX0031] gi|315155624|gb|EFT99640.1| thymidylate kinase [Enterococcus faecalis TX0043] gi|315159635|gb|EFU03652.1| thymidylate kinase [Enterococcus faecalis TX0312] gi|315168745|gb|EFU12762.1| thymidylate kinase [Enterococcus faecalis TX1341] gi|315170439|gb|EFU14456.1| thymidylate kinase [Enterococcus faecalis TX1342] gi|315173504|gb|EFU17521.1| thymidylate kinase [Enterococcus faecalis TX1346] gi|315573802|gb|EFU85993.1| thymidylate kinase [Enterococcus faecalis TX0309B] gi|315580314|gb|EFU92505.1| thymidylate kinase [Enterococcus faecalis TX0309A] gi|323481685|gb|ADX81124.1| thymidylate kinase [Enterococcus faecalis 62] gi|327535978|gb|AEA94812.1| thymidylate kinase [Enterococcus faecalis OG1RF] gi|329572901|gb|EGG54522.1| dTMP kinase [Enterococcus faecalis TX1467] Length = 212 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 7/209 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +GAGKT+ + + +R + + TREPGG P AE R V+L D Sbjct: 3 GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 63 DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q NR + +D + + + H++ R +L +A Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|314937311|ref|ZP_07844653.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80] gi|313654607|gb|EFS18357.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80] Length = 205 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT ++ + + L +NY+V TREPGG E R++LL + Sbjct: 4 FITFEGPEGSGKTTVLNQINKLLS-ENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL K++LCDR++DSS AYQG + + E ++ Sbjct: 61 TEALLFAASRREHLVEKVIPALKNDKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++ + H+K + + + + P Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +VD+ S +SV ++ I+ ++ Sbjct: 176 ERFKVVDATQSIESVISDTYEIILSYLK 203 >gi|298369193|ref|ZP_06980511.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314] gi|298283196|gb|EFI24683.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314] Length = 211 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 115/199 (57%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K++ + + V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVMKQWFEARRLPVLFTREPGGTPTGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E+VI PAL G ++ DRF D+++AYQG +++L+ Sbjct: 64 TETLLMFAARQQHLEDVILPALKNGIHVVSDRFTDATFAYQGGGRGVPLQDIETLENWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T++LD+P+++ L+R+ +RE D FER+ + R + A P Sbjct: 124 GSFRPDLTLLLDVPLEVSLERIGR---VREK---DRFEREQADFFTRVRNAYFSRAAANP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D S ++V T+I Sbjct: 178 ERYAVIDGNRSPEAVRTSI 196 >gi|329942859|ref|ZP_08291638.1| thymidylate kinase [Chlamydophila psittaci Cal10] gi|313848031|emb|CBY17029.1| thymidylate kinase [Chlamydophila psittaci RD1] gi|325507234|gb|ADZ18872.1| thymidylate kinase [Chlamydophila psittaci 6BC] gi|328815119|gb|EGF85108.1| thymidylate kinase [Chlamydophila psittaci Cal10] gi|328914700|gb|AEB55533.1| thymidylate kinase [Chlamydophila psittaci 6BC] Length = 207 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + +V TREPGG+ E R +L E Sbjct: 1 MFIVIEGCEGSGKSSLTQLLKDKLMAEGKEVVATREPGGSSLGERVRDWILDPSTTEISP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F AAR H+ I PAL GKI++CDRF DS+ YQG ++ +L Sbjct: 61 YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V E ++P+ T +LD+P D GLKR Q + S D FE K + H K R+ FL +A Sbjct: 121 VGEKKILPNLTCLLDIPADEGLKRKQQQKS------FDKFENKSLAYHTKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++PD ++D+ + ++ EL Sbjct: 175 SRPDSYLVLDARQPIEESLNKVMTAYTEL 203 >gi|227545157|ref|ZP_03975206.1| dTMP kinase [Lactobacillus reuteri CF48-3A] gi|300909170|ref|ZP_07126631.1| thymidylate kinase [Lactobacillus reuteri SD2112] gi|227184889|gb|EEI64960.1| dTMP kinase [Lactobacillus reuteri CF48-3A] gi|300893035|gb|EFK86394.1| thymidylate kinase [Lactobacillus reuteri SD2112] Length = 213 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 113/203 (55%), Gaps = 6/203 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ I +++ L Q V TREPGG +E R VL + Sbjct: 3 GKFISFEGPDGAGKTSVIQQIQQQLEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDRF+DSS AYQG + + Sbjct: 63 MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ +MP TI LD+ +IGL+R+ S ++ +++ + H+ RQ +L + Sbjct: 123 QFAIDGLMPSLTIYLDIESEIGLRRIAE----HRSNQINRLDKEKLAFHQTVRQSYLKLY 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 +N P+R ++D++ + V ++ Sbjct: 179 KNYPERIKLIDASQPLEKVIEDV 201 >gi|311106019|ref|YP_003978872.1| thymidylate kinase [Achromobacter xylosoxidans A8] gi|310760708|gb|ADP16157.1| thymidylate kinase [Achromobacter xylosoxidans A8] Length = 207 Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 72/199 (36%), Positives = 108/199 (54%), Gaps = 10/199 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG++GAGK+TH + FL+ + DV TREPGGTP E R +LL+ D Sbjct: 3 TRGRFITLEGVDGAGKSTHTVWIADFLRAQGLDVVSTREPGGTPLGEKLRGLLLT---DP 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + E ++ AAR +H+ VI PAL G ++CDR+ D++YAYQG + +L+ Sbjct: 60 MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGASRVAALE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +Q PD T + D+P+++ R+ + RE D FER+ E+ R+ + A Sbjct: 120 DW-MQAGQPDRTWLFDVPLEVARARLAD---AREP---DRFEREGAAFFERTREAYHARA 172 Query: 182 RNQPDRCHIVDSAHSFQSV 200 R IVDS S + Sbjct: 173 ATDQKRIRIVDSTQSIAQI 191 >gi|104774437|ref|YP_619417.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514536|ref|YP_813442.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274732|sp|Q048W8|KTHY_LACDB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123378380|sp|Q1G923|KTHY_LACDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|103423518|emb|CAI98420.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093851|gb|ABJ59004.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126247|gb|ADY85577.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 212 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG +GAGKTT I+ + + +Q + ++ VTREPGG+ AE R ++L E Sbjct: 3 GYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AA+R HV +I PAL G +++ DRF+DSS AYQG+ + L +D + + Sbjct: 63 NAKTEALLYAASRSQHVSEIINPALKRGDLVMSDRFVDSSLAYQGQ---GRGLGIDEVAQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + PD TI LDL GL R+ S E D E++ + HE+ + + Sbjct: 120 INAFATGHLEPDLTIFLDLDPAQGLARIAKVRSGSE----DRLEQEKLAFHEEVYRGYQK 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PDR +VD++ V + +V Sbjct: 176 VNQAHPDRVKVVDASQDLPQVVAASVKLV 204 >gi|332042231|gb|EGI78557.1| thymidylate kinase [Hylemonella gracilis ATCC 19624] Length = 211 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG F+SFEGI+GAGK+THI L + L+ + + V +TREPGGTP AE R ++L+ +D Sbjct: 2 SGFFVSFEGIDGAGKSTHIERLAQVLREQGHMVTLTREPGGTPLAERLRALVLAEKMD-- 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++ AAR DH++ VI PAL G +LCDR+ D+SYAYQG L +L+ Sbjct: 60 -ALTEALLVFAARRDHLQTVIEPALARGDAVLCDRYTDASYAYQGGGRGLDVSVLATLER 118 Query: 123 I------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + PD T+ DL ++ +R+ + D FE + V + + Sbjct: 119 WVQAKPGAAGLRQPDLTLWFDLAPELAAERLSG------ARAPDKFEAEPVAFFRRVAEG 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + A P R +D+A S ++V +L +V Sbjct: 173 YARRAAEDPGRFARLDAAQSREAVWDELLRVV 204 >gi|229015433|ref|ZP_04172435.1| Thymidylate kinase [Bacillus cereus AH1273] gi|229021638|ref|ZP_04178225.1| Thymidylate kinase [Bacillus cereus AH1272] gi|228739641|gb|EEL90050.1| Thymidylate kinase [Bacillus cereus AH1272] gi|228745852|gb|EEL95852.1| Thymidylate kinase [Bacillus cereus AH1273] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDIAFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +VD+ + + ++ IV Sbjct: 175 VVERFSDRIVVVDADQPMEKLIEEVIQIV 203 >gi|303251157|ref|ZP_07337341.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251422|ref|ZP_07533336.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253501|ref|ZP_07535371.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650008|gb|EFL80180.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856506|gb|EFM88648.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859002|gb|EFM91045.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 13/208 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGKTT ++ L++ V TREPGGTP AE RH++ + Sbjct: 3 GKFIVLEGLEGAGKTTAHQVILAQLEKAGKSVVQTREPGGTPLAEKLRHLIKHETEEAVS 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQ G R +HL L++L+E Sbjct: 63 DKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHL-LETLKE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + PD TI LD+ +GL R + R L E LD+F R RQ +L++ Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGRGELDRIEQQSLDFFYRT--------RQRYLEL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +N ++ I+++ S + VA +I V Sbjct: 174 TQNN-EKAVIINAEQSIEQVAADIQQAV 200 >gi|238855359|ref|ZP_04645671.1| dTMP kinase [Lactobacillus jensenii 269-3] gi|260664925|ref|ZP_05865776.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US] gi|282934589|ref|ZP_06339836.1| dTMP kinase [Lactobacillus jensenii 208-1] gi|313472529|ref|ZP_07813019.1| dTMP kinase [Lactobacillus jensenii 1153] gi|238832020|gb|EEQ24345.1| dTMP kinase [Lactobacillus jensenii 269-3] gi|239529963|gb|EEQ68964.1| dTMP kinase [Lactobacillus jensenii 1153] gi|260561408|gb|EEX27381.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US] gi|281301341|gb|EFA93638.1| dTMP kinase [Lactobacillus jensenii 208-1] Length = 215 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 120/210 (57%), Gaps = 11/210 (5%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKTT + L+++ ++ ++ VTREPGG+ AEA R ++L E Sbjct: 2 AGYFITFEGPDGAGKTTVLEKLIEKIKEQVTCEILVTREPGGSKIAEAIREIILDPENTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL GK++ DRF+DSS AYQG ++L +D + Sbjct: 62 MDDRTEALLYAAARSQHMAEVVFPALEAGKLVFSDRFVDSSLAYQG---MGRNLGIDKVA 118 Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 EI + + PD T+ LD+ + GL R+ +E D E++ + H+K + Sbjct: 119 EINQFATDGLNPDLTLFLDIKPEDGLARIAKVRPDKE----DRLEKEKLSFHKKVYTGYQ 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +I + P+R +VD++ V + L I+ Sbjct: 175 EIVKKYPERIKVVDASQDVDYVVADCLTIL 204 >gi|313124284|ref|YP_004034543.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280847|gb|ADQ61566.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325685698|gb|EGD27777.1| thymidylate kinase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 212 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG +GAGKTT I+ + + +Q + ++ VTREPGG+ AE R ++L E Sbjct: 3 GYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AA+R HV +I PAL G +++ DRF+DSS AYQG+ + L +D + + Sbjct: 63 NAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQ---GRGLGIDEVAQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + PD TI LDL GL R+ S E D E++ ++ HE+ + + Sbjct: 120 INAFATGHLEPDLTIFLDLDPAQGLARIAKVRSGSE----DRLEQEKLVFHEEVYRGYQK 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PDR +VD++ V + +V Sbjct: 176 VNQAHPDRVKVVDASQDLPQVVAASVKLV 204 >gi|148272108|ref|YP_001221669.1| hypothetical protein CMM_0928 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166221738|sp|A5CPG8|KTHY_CLAM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147830038|emb|CAN00966.1| tmkA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 211 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 122/208 (58%), Gaps = 18/208 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+FI+ EG +G GK+T +LL+ +L+ + ++V VTREPGG+ R ++L Sbjct: 2 TGVFITLEGGDGVGKSTQSALLRGWLEDEGHEVVVTREPGGSELGVEIREIVLHR-RGHI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R HVE V+RPAL G ++L DR+LDSS AYQG + + L ++E Sbjct: 61 APRAEALLYAADRAHHVETVVRPALDRGAVVLQDRYLDSSVAYQG---AGRVLDAGEIRE 117 Query: 123 ISV---QEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +S+ Q ++PD T++LDL + L + R+ ES ER D HE+ RQ Sbjct: 118 LSLWAAQGLLPDLTVLLDLDQAAARVRLDAARTRFDRLES------ERAD--FHERVRQA 169 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204 FL +A +P+R +VD+A + +A I Sbjct: 170 FLGLAGAEPERFLVVDAARPREEIAAAI 197 >gi|225351239|ref|ZP_03742262.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158695|gb|EEG71937.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 219 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 81/224 (36%), Positives = 126/224 (56%), Gaps = 20/224 (8%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G+FISFEG++G GKTT + L+ +++ + + VTREPGGT A R +LL GV Sbjct: 1 MNMQGIFISFEGVDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLG-GV 59 Query: 60 D----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + + AEA++FAA R HV VIRPAL G +++ DR+LDSS AYQ + L Sbjct: 60 EGSDADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQA---GGREL 116 Query: 116 FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 ++++S+ E++P+ T +LDL R+Q+ ESA D+ R Sbjct: 117 TAGEIRDLSMWATCELLPNRTYLLDLDPVQSHARLQHDEDRMESAGNDFQRRT------- 169 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 RQ FLD+A+ + R ++D++ S V ++I + ++ Q + Sbjct: 170 -RQAFLDLAKAESQRFRVIDASQSIDEVWSHIQDDFAQISQTKT 212 >gi|224824708|ref|ZP_03697815.1| dTMP kinase [Lutiella nitroferrum 2002] gi|224603201|gb|EEG09377.1| dTMP kinase [Lutiella nitroferrum 2002] Length = 208 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 7/206 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG++GAGK+T ++ ++ +L + D TREPGGT E R +LL+ Sbjct: 1 MRRGTFITLEGVDGAGKSTQLAAVRDWLAEQGIDAVFTREPGGTVLGEKLRELLLAVDT- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E E ++ AAR +H+ VI PAL G+ ++ DRF D+++AYQG +++L Sbjct: 60 EVTLETETLLMFAARQEHIARVIEPALAAGRWVVSDRFTDATFAYQGGGRGLPFARIEAL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ Q + PD T++ D+P+D+ +R+ LD FE++ H + R +L Sbjct: 120 EDWVQQGLQPDLTLLFDVPLDVAARRMAG-----GERVLDRFEQEAADFHARVRAAYLQR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 A P R +VD+ S + V ++ Sbjct: 175 ASANP-RIAVVDANRSPEQVRAEVMR 199 >gi|325696293|gb|EGD38184.1| thymidylate kinase [Streptococcus sanguinis SK160] Length = 212 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL++ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKKYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GKI+L DRF+DSS AYQG +D L Sbjct: 61 AMDAKTELLLYIASRRQHLAERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVADIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIARSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|218767791|ref|YP_002342303.1| thymidylate kinase [Neisseria meningitidis Z2491] gi|304388080|ref|ZP_07370209.1| thymidylate kinase [Neisseria meningitidis ATCC 13091] gi|14285515|sp|Q9JVE7|KTHY_NEIMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|121051799|emb|CAM08105.1| putative thymidylate kinase [Neisseria meningitidis Z2491] gi|304337937|gb|EFM04077.1| thymidylate kinase [Neisseria meningitidis ATCC 13091] gi|319410042|emb|CBY90376.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis WUE 2594] Length = 206 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200 >gi|148543567|ref|YP_001270937.1| thymidylate kinase [Lactobacillus reuteri DSM 20016] gi|184152974|ref|YP_001841315.1| thymidylate kinase [Lactobacillus reuteri JCM 1112] gi|227363473|ref|ZP_03847595.1| thymidylate kinase [Lactobacillus reuteri MM2-3] gi|325681917|ref|ZP_08161435.1| thymidylate kinase [Lactobacillus reuteri MM4-1A] gi|166987704|sp|A5VIC6|KTHY_LACRD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621731|sp|B2G5V3|KTHY_LACRJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148530601|gb|ABQ82600.1| thymidylate kinase [Lactobacillus reuteri DSM 20016] gi|183224318|dbj|BAG24835.1| thymidylate kinase [Lactobacillus reuteri JCM 1112] gi|227071487|gb|EEI09788.1| thymidylate kinase [Lactobacillus reuteri MM2-3] gi|324978561|gb|EGC15510.1| thymidylate kinase [Lactobacillus reuteri MM4-1A] Length = 213 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 110/203 (54%), Gaps = 6/203 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ I ++ L Q V TREPGG +E R VL + Sbjct: 3 GKFISFEGPDGAGKTSVIQQIQLELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDRF+DSS AYQG + + Sbjct: 63 MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ +MP TI LD+ +IGLKR+ S ++ + + + H RQ +L + Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRIAE----HRSNQVNRLDEEKLEFHRTVRQSYLKLY 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 +N P+R ++D++ + V ++ Sbjct: 179 QNYPERIELIDASQPLEKVIEDV 201 >gi|251794049|ref|YP_003008780.1| thymidylate kinase [Paenibacillus sp. JDR-2] gi|247541675|gb|ACS98693.1| thymidylate kinase [Paenibacillus sp. JDR-2] Length = 217 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 113/205 (55%), Gaps = 4/205 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+ EG EGAGKTT I L +Q++ V TREPGG P AE R V+L Sbjct: 1 MNKGIFITIEGGEGAGKTTLIEQLAHTMQQRGKTVITTREPGGIPIAEQIRSVILDRNHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA+++AA+R H+ + PAL +G+I++CDRF+DSS AYQG + S+ Sbjct: 61 GMDARTEALLYAASRRQHLVEKVMPALADGQIVICDRFVDSSLAYQGHARGLGMEEVWSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V MP TI +D+ ++GL R++ RE LD + + H+ R+ + + Sbjct: 121 NRFAVDGAMPQLTIYMDIDPEVGLARIRAAGE-REVNRLDL---ESLAFHQLVREGYQKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 P+R +D+ ++ +V ++ Sbjct: 177 LEQFPERIVQIDAGNAANAVLEEVI 201 >gi|121634466|ref|YP_974711.1| thymidylate kinase [Neisseria meningitidis FAM18] gi|166221758|sp|A1KST1|KTHY_NEIMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120866172|emb|CAM09912.1| putative thymidylate kinase [Neisseria meningitidis FAM18] gi|325131877|gb|EGC54577.1| thymidylate kinase [Neisseria meningitidis M6190] Length = 206 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 119/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200 >gi|307288618|ref|ZP_07568599.1| thymidylate kinase [Enterococcus faecalis TX0109] gi|306500372|gb|EFM69708.1| thymidylate kinase [Enterococcus faecalis TX0109] gi|315165331|gb|EFU09348.1| thymidylate kinase [Enterococcus faecalis TX1302] Length = 212 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 7/209 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +GAGKT+ + + +R + + TREPGG P AE R V+L D Sbjct: 3 GIFITFEGPDGAGKTSVLKEVAERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF DSS AYQG + S+ Sbjct: 63 DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFADSSLAYQGAGRRIGIAPIASINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q NR + +D + + + H++ R +L +A Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|229544854|ref|ZP_04433579.1| thymidylate kinase [Enterococcus faecalis TX1322] gi|229310022|gb|EEN76009.1| thymidylate kinase [Enterococcus faecalis TX1322] Length = 212 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 7/199 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +GAGKT+ + + +R + + TREPGG P AE R V+L D Sbjct: 3 GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 63 DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q NR + +D + + + H++ R +L +A Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSV 200 P R +D+ S + V Sbjct: 178 EENPQRIKKIDARMSLELV 196 >gi|311744559|ref|ZP_07718359.1| thymidylate kinase [Aeromicrobium marinum DSM 15272] gi|311312178|gb|EFQ82095.1| thymidylate kinase [Aeromicrobium marinum DSM 15272] Length = 217 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 9/203 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG+F++ EG EG GK+T LL +L + + V VTREPGGTP R ++L Sbjct: 6 DSGVFVALEGGEGGGKSTQSGLLASWLTERGHQVLVTREPGGTPVGSQLRRIVLDPATGA 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + EA+++AA + +HVE ++ PAL G+++L DR++DS+ AYQG + L+ + Sbjct: 66 LNSRTEALIYAADKAEHVEALVLPALAAGQVVLTDRYVDSTLAYQGAGRAIDVQELEHVA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ P T++LD+ +GL R D E + + H + R+ FL +A Sbjct: 126 RWATADLRPHLTVVLDIDPVVGLARAGEP---------DRIEAEPLAFHRRVREHFLRLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 PD +VD+ + V +I Sbjct: 177 AADPDHYLVVDADRPAEQVQADI 199 >gi|93004986|ref|YP_579423.1| thymidylate kinase [Psychrobacter cryohalolentis K5] gi|92392664|gb|ABE73939.1| thymidylate kinase [Psychrobacter cryohalolentis K5] Length = 225 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/219 (36%), Positives = 115/219 (52%), Gaps = 16/219 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG EG GKTT I L LQ D TREPGG+P AE R +LL Sbjct: 17 TQGRFISFEGTEGVGKTTAIEQLCARLQAHGIDYLRTREPGGSPFAERLREILLDPNT-A 75 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFL 117 + E ++ AAR DH++ VI PAL G ++CDRF DS+ AYQG + D+ + Sbjct: 76 INDDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDAIVRAKI 135 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D L E V + +P+ T+ LDLPV G+ R R + D FE++ + Q F Sbjct: 136 DMLIEQFVMQ-LPELTLWLDLPVLEGMARANKR------SAADRFEQQATEFFTRVHQGF 188 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +A QP+R +D++ S V+ I W+ +++++ Sbjct: 189 SVLASEQPERIQRIDASGSANEVSARI----WQTIEEKL 223 >gi|227519453|ref|ZP_03949502.1| thymidylate kinase [Enterococcus faecalis TX0104] gi|227073065|gb|EEI11028.1| thymidylate kinase [Enterococcus faecalis TX0104] Length = 212 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 7/199 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +GAGKT+ + + +R + + TREPGG P AE R V+L D Sbjct: 3 GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 63 DERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q NR + +D + + + H++ R +L +A Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSV 200 P R +D+ S + V Sbjct: 178 EENPQRIKKIDARMSLELV 196 >gi|220927615|ref|YP_002504524.1| thymidylate kinase [Clostridium cellulolyticum H10] gi|219997943|gb|ACL74544.1| thymidylate kinase [Clostridium cellulolyticum H10] Length = 206 Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 115/204 (56%), Gaps = 6/204 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT I L++++L+ +V ++REPGGT +E R ++L Sbjct: 1 MRKGLFITVEGTDGSGKTTQIKLMEQYLKDMGNEVVLSREPGGTRISEMIRDLILDPENK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++AAAR HV VIRPA+ GK ++CDRF+DSSYAYQG + + Sbjct: 61 DISPLTEMMLYAAARAQHVSQVIRPAIESGKSVICDRFVDSSYAYQGCGRGVDLKTIADV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V+PD T LDL + ++R +S D E++ + H + + + + Sbjct: 121 NRAAIDGVVPDITFFLDLDPRVAMER------RVKSTGADRIEQEKMDFHIRVYEGYERM 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A P+R +D++ S + +++ I Sbjct: 175 ALLYPERIKTIDASKSIEEISSQI 198 >gi|224475615|ref|YP_002633221.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420222|emb|CAL27036.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300] Length = 204 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 14/212 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSC-GVDEF 62 FI+FEG EG+GKTT +L+R +R ++YDV TREPGG PAAE R +LL VD+ Sbjct: 4 FITFEGPEGSGKTT---VLQRVAERLSQDYDVLKTREPGGVPAAEQIREILLDGEAVDD- 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++FAA+R +H+ + PAL E K++LCDR++DSS AYQG + ++ E Sbjct: 60 --RTEALLFAASRREHLVEKVLPALKEDKVVLCDRYIDSSLAYQGFARGIGVEEVRAINE 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + PD TI LD+ + G +R++N ++ + + + H++ + + D+ Sbjct: 118 FAINGLYPDLTIYLDITAETGRERIENN-----DRNMNRLDHESIAFHQRVIKGYHDLID 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P+R ++D+ ++V + + + K Sbjct: 173 KEPERFKVIDANQELEAVVEDTYTAIKMFLGK 204 >gi|329925532|ref|ZP_08280406.1| dTMP kinase [Paenibacillus sp. HGF5] gi|328939815|gb|EGG36155.1| dTMP kinase [Paenibacillus sp. HGF5] Length = 234 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 4/192 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ EG +G+GKTT + L F+Q + +TREPGG AE R ++L A Sbjct: 27 LFITVEGGDGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRSIILDPEHTSMDA 86 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AAAR H+ + PAL +G +LCDRF+DSS YQG + S+ + + Sbjct: 87 RTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVWSINQFA 146 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++ D+ IGL R+ + RE LD +++ HEK R+ +L +A Sbjct: 147 IDTRMPDLTLLFDIEPRIGLSRIAAN-AEREWNRLDM---ENLTFHEKVREGYLLVAERN 202 Query: 185 PDRCHIVDSAHS 196 PDR IVD++ + Sbjct: 203 PDRIRIVDASKT 214 >gi|256616735|ref|ZP_05473581.1| thymidylate kinase [Enterococcus faecalis ATCC 4200] gi|256596262|gb|EEU15438.1| thymidylate kinase [Enterococcus faecalis ATCC 4200] gi|315032614|gb|EFT44546.1| thymidylate kinase [Enterococcus faecalis TX0017] gi|315143843|gb|EFT87859.1| thymidylate kinase [Enterococcus faecalis TX2141] Length = 212 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 7/209 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +GAGKT+ + + +R + + TREPGG P AE R V+L D Sbjct: 3 GIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDRM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 63 DERTEALLYAAARRQHLVEKIFPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q NR + +D + + + H++ R +L +A Sbjct: 123 FATEGVSPDFTIYLDVDSDTGLRRIQENR-----TQQIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|171780208|ref|ZP_02921112.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281556|gb|EDT46991.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 208 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 5/210 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ I+FEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIITFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKEIIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + S PD T+ D+ +IGL R+ RE LD E+ D +H++ RQ +LD+ Sbjct: 121 NDFSTDGRKPDLTLYFDVESEIGLARIAKNAD-REVNRLD-LEKLD--MHKRVRQGYLDL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ + +R +D++ + V +++ E Sbjct: 177 AQTE-ERIVTIDASRELEQVVAEATHVILE 205 >gi|268318943|ref|YP_003292599.1| hypothetical protein FI9785_450 [Lactobacillus johnsonii FI9785] gi|262397318|emb|CAX66332.1| tmk [Lactobacillus johnsonii FI9785] Length = 213 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKTT I+ ++K+ Q VTREPGG+ +E R ++L E Sbjct: 3 GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG ++L ++ +++ Sbjct: 63 DDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQG---VGRNLGIEEVKQ 119 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ + PD TI LDL +GL R++ + +E D E++ + H K + + Sbjct: 120 INDFGTGGLEPDLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + PDR VD+ + VA N + I+ Sbjct: 176 LLERYPDRIKKVDANLPIKDVAANSVKII 204 >gi|320547322|ref|ZP_08041613.1| dTMP kinase [Streptococcus equinus ATCC 9812] gi|320448020|gb|EFW88772.1| dTMP kinase [Streptococcus equinus ATCC 9812] Length = 210 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKDSIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + S PD T+ D+ ++GL R+ + + RE LD E+ D +H++ RQ +LD+ Sbjct: 121 NDFSTDGREPDLTLYFDVESEVGLDRIA-KNADREVNRLD-LEKLD--MHKRVRQGYLDL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A+ + +R +D++ + V + ++ E + K Sbjct: 177 AQTE-NRIVTIDASRELEQVVADATQVILERLAK 209 >gi|288965848|pdb|3LD9|A Chain A, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution gi|288965849|pdb|3LD9|B Chain B, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution gi|288965850|pdb|3LD9|C Chain C, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution gi|288965851|pdb|3LD9|D Chain D, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution Length = 223 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 17/190 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61 +FI+FEGI+G+GKTT LL +L +V +TREPGGT E+ R++L G+D Sbjct: 22 MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDS 81 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E + F A R +H +I+P+LM+ KI++CDRF+DS+ AYQG +D L Sbjct: 82 L---SELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLN 138 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ V +V PD T I+D+ ++ L R +C + +E D+ + + R F DIA Sbjct: 139 DL-VIDVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIA 187 Query: 182 RNQPDRCHIV 191 + P RCH++ Sbjct: 188 KKNPHRCHVI 197 >gi|294791185|ref|ZP_06756342.1| dTMP kinase [Scardovia inopinata F0304] gi|294457656|gb|EFG26010.1| dTMP kinase [Scardovia inopinata F0304] Length = 216 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 122/222 (54%), Gaps = 20/222 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEG++G GKTT + LK +L + V +TREPGGT E R +LL D+ Sbjct: 13 GLFVTFEGVDGVGKTTQATRLKNYLIHQGRQVLITREPGGTHLGEQIRQLLLHG--DDEA 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 EA+++AA+R V IRPAL GK+++ DR++DSS AYQ G R+ + + L E Sbjct: 71 PRTEALLYAASRAQLVFQEIRPALNMGKVVISDRYIDSSLAYQAGGRELTMEQ-IRQLNE 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T +LD+ + R+ ES+ D+F R RQ FLD+A Sbjct: 130 WATNGLWPQRTYLLDMDFEQAQARLSGPKDRLESSGADFFNRT--------RQAFLDLAG 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 +PDR I++++ S ++ VW+ V+ + L +++D Sbjct: 182 QEPDRFVILNASLS--------VDQVWDAVKADIDSLLARRD 215 >gi|58697581|ref|ZP_00372803.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans] gi|58535919|gb|EAL59679.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans] Length = 197 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 15/194 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ +V +TREPGGT AE R VLL+ +D Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLLTNNIDPI 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG S + L + Sbjct: 77 ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 L-VEIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIVDSAHS 196 +P RC ++ + Sbjct: 184 KEPVRCSVITGIET 197 >gi|299820920|ref|ZP_07052809.1| thymidylate kinase [Listeria grayi DSM 20601] gi|299817941|gb|EFI85176.1| thymidylate kinase [Listeria grayi DSM 20601] Length = 217 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 114/197 (57%), Gaps = 10/197 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +G+GKTT + + L +N TREPGG+P +E R V+L G + Sbjct: 9 SGFFITLEGPDGSGKTTVGNKIAEKLTAENIAYIKTREPGGSPISEKLREVILGIGNEAM 68 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAAR HV IRPAL E ++LCDRFLDSS AYQ ++L +D + Sbjct: 69 DPRTEVLLIAAARRQHVVETIRPALAENLVVLCDRFLDSSLAYQA---GGRNLDMDEVLA 125 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I +V++ MPD T LD+P ++GL+R+ + + ++ +++D++ H++ + + + Sbjct: 126 INHYAVEDTMPDRTYYLDVPAEVGLERI----AANKGREINRLDQEDIVYHQRVGRAYAE 181 Query: 180 IARNQPDRCHIVDSAHS 196 + P+R +D+ + Sbjct: 182 VMNRFPERFKRMDAMQA 198 >gi|15606283|ref|NP_213662.1| thymidylate kinase [Aquifex aeolicus VF5] gi|6016457|sp|O67099|KTHY_AQUAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|158429380|pdb|2PBR|A Chain A, Crystal Structure Of Thymidylate Kinase (Aq_969) From Aquifex Aeolicus Vf5 gi|158429381|pdb|2PBR|B Chain B, Crystal Structure Of Thymidylate Kinase (Aq_969) From Aquifex Aeolicus Vf5 gi|2983484|gb|AAC07063.1| thymidylate kinase [Aquifex aeolicus VF5] Length = 195 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 15/201 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GKTT L +L++K Y V + REPGGT E R +LL+ +DE Sbjct: 1 MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLTEELDE--- 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A+R +E I P L K+++ DRF+ S+ AYQG F+ +L E + Sbjct: 58 RTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V PD T++LD+PVDI L+R++ + + FE K+ + EK R+ FL++A+ + Sbjct: 118 TRGVKPDITLLLDIPVDIALRRLKEK---------NRFENKEFL--EKVRKGFLELAKEE 166 Query: 185 PDRCHIVDSAHSFQSVATNIL 205 + ++D++ + V IL Sbjct: 167 EN-VVVIDASGEEEEVFKEIL 186 >gi|68171235|ref|ZP_00544639.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa] gi|88658326|ref|YP_507050.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas] gi|123493813|sp|Q2GHN3|KTHY_EHRCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|67999355|gb|EAM86000.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa] gi|88599783|gb|ABD45252.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas] Length = 202 Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/190 (37%), Positives = 110/190 (57%), Gaps = 17/190 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61 +FI+FEGI+G+GKTT LL +L +V +TREPGGT E+ R++L G+D Sbjct: 1 MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLFKAQGLDS 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E + F A R +H +I+P+LM+ KI++CDRF+DS+ AYQG +D L Sbjct: 61 L---SELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLN 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ V +V PD T I+D+ ++ L R +C + +E D+ + + R F DIA Sbjct: 118 DL-VIDVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIA 166 Query: 182 RNQPDRCHIV 191 + P RCH++ Sbjct: 167 KKNPHRCHVI 176 >gi|302332195|gb|ADL22388.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus JKD6159] Length = 205 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 4 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRTLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRNQNRLDQEDLKFHEKVIEGYQEIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204 >gi|58698493|ref|ZP_00373398.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630910|ref|YP_002727701.1| thymidylate kinase [Wolbachia sp. wRi] gi|58534987|gb|EAL59081.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae] gi|225592891|gb|ACN95910.1| thymidylate kinase [Wolbachia sp. wRi] Length = 212 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 73/194 (37%), Positives = 113/194 (58%), Gaps = 15/194 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ +V +TREPGGT AE R VLL+ +D Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLLTNNIDPI 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG S + L + Sbjct: 77 ---SELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 L-VEIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIVDSAHS 196 +P RC ++ + Sbjct: 184 KEPVRCSVITGIET 197 >gi|42518522|ref|NP_964452.1| thymidylate kinase [Lactobacillus johnsonii NCC 533] gi|59798356|sp|Q74KZ7|KTHY_LACJO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|41582807|gb|AAS08418.1| thymidylate kinase [Lactobacillus johnsonii NCC 533] Length = 213 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKTT I+ ++K+ Q VTREPGG+ +E R ++L E Sbjct: 3 GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG ++L ++ +++ Sbjct: 63 DDRTEALLYAAQRSQHVSEVIRPALATGKVVLSDRFIDSSLAYQG---VGRNLGIEEVKQ 119 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ + PD TI LDL +GL R++ + +E D E++ + H K + + Sbjct: 120 INDFGTGGLEPDLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + PDR VD+ + VA N + I+ Sbjct: 176 LFERYPDRIKKVDANLPIKDVAANSVKII 204 >gi|300867280|ref|ZP_07111940.1| Thymidylate kinase [Oscillatoria sp. PCC 6506] gi|300334757|emb|CBN57106.1| Thymidylate kinase [Oscillatoria sp. PCC 6506] Length = 217 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 117/209 (55%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNY----DVHVTREPGGTPAAEAARHVLLSCG 58 G I FEG+EG+GKTT I + +L ++N+ + VTREPGGT + R +LL G Sbjct: 3 GKLIVFEGVEGSGKTTQIERSRLWLLSKENHCKVPQIVVTREPGGTDLGKGLRGLLLESG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE +++AA R HVE V++P L +G I+LCDRF DS+ AYQG ++ Sbjct: 63 GENICDRAELLLYAADRAQHVEAVLKPELAKGSIVLCDRFTDSTIAYQGYGRGLSLSLIN 122 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L EI+ + D T+ LDL V++GL+RV+ R D E+ D+ H + +Q F Sbjct: 123 QLNEIATLGLQSDLTLWLDLEVEVGLRRVKRR------GVSDRIEQADLEFHRRVQQGFA 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207 D+A DR VD+ S + V+ I +I Sbjct: 177 DLATANRDRIIRVDANRSEEEVSEEIHHI 205 >gi|75908183|ref|YP_322479.1| thymidylate kinase [Anabaena variabilis ATCC 29413] gi|123609755|sp|Q3MBQ2|KTHY_ANAVT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|75701908|gb|ABA21584.1| thymidylate kinase [Anabaena variabilis ATCC 29413] Length = 211 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG+EG GKT+ + L +LQ V +TREPGGT R +LL D+ Sbjct: 2 GGRFIVFEGVEGCGKTSQMQLCAEWLQNLGISVILTREPGGTELGVDLRRLLLQKAEDKP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E +++AA R HV ++P L +GK +LCDR++DS+ AYQG + + L Sbjct: 62 IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +I+ + D TI LD+ V++GL R + E+ LD E++ + H + +Q + ++A Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----ENVGLDRIEQETIAFHRRVQQGYANLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + P R VD S ++V I I+ Sbjct: 177 ASSPSRIIRVDGQLSKETVHKTIQEIL 203 >gi|309803553|ref|ZP_07697646.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d] gi|312870920|ref|ZP_07731025.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a] gi|308164437|gb|EFO66691.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d] gi|311093610|gb|EFQ51949.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a] Length = 213 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 11/213 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R+++L E Sbjct: 3 GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + L +D +++ Sbjct: 63 NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + + PD T+ D+ GL+R+Q E D E+++ + H+K + Sbjct: 120 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R VD+ S VA+ + I+ E + Sbjct: 176 LLSAYPERIKRVDAELSIAEVASQSVKILEEYM 208 >gi|188584675|ref|YP_001916220.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349362|gb|ACB83632.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 206 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 118/209 (56%), Gaps = 10/209 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+G GK+T + + L++ ++V TREPGGT +A R +LL+ Sbjct: 5 GKFITFEGIDGCGKSTQLKKVTSKLKKLGFNVVSTREPGGTSVGDAIREILLAPKHYNMT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E EA+++AA+R+ H+E I P L E I+LCDRF+DSS AYQG + S + + + + Sbjct: 65 IETEALLYAASRVQHIEEFIIPNLAEDNIVLCDRFVDSSVAYQGIKLSHEEVI--RVNQP 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +V PD T + +DI +R R + + D E + V + R+ +L +A Sbjct: 123 AYDKVTPDITFL----IDITPERAAKRLGIEK----DRIENRGVNYQSQVRENYLFLAEE 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +PDR I++ S + V + N++ +++ Sbjct: 175 EPDRIVIINGDQSEEKVFEELWNVLEDIL 203 >gi|329946277|ref|ZP_08293871.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386] gi|328527569|gb|EGF54564.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386] Length = 253 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 111/213 (52%), Gaps = 8/213 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFISFEG +G GKTT I +L L + D +TREPGGT R +LL G Sbjct: 10 HPGLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTGLGLEIRRLLLHGGY-- 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R H+ +RPAL G ++L DR+LDSS AYQG S + L Sbjct: 68 VAPRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLS 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++PD TI+LD D+ +R R D E++ R+ FL +A Sbjct: 128 LWATEGLLPDLTILLDGDPDLAEQRATGR------GAKDRLEQEGGTFRTSLRRQFLALA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R ++D+ S VA +++ E V++ Sbjct: 182 EAEPGRFVVIDADRSVDQVADDVIGAAVEAVRR 214 >gi|227888765|ref|ZP_04006570.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200] gi|227850602|gb|EEJ60688.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200] Length = 217 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKTT I+ ++K+ Q +TREPGG+ +E R ++L E Sbjct: 7 GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLITREPGGSKISENIRTIILDPENKEM 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG ++L ++ +++ Sbjct: 67 DDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQG---VGRNLGIEEVKQ 123 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ + PD TI LDL +GL R++ + +E D E++ + H K + + Sbjct: 124 INDFGTGGLEPDLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + PDR VD+ + VA N + I+ Sbjct: 180 LLERYPDRIKKVDANLPIKDVAANSVKII 208 >gi|258424483|ref|ZP_05687362.1| thymidylate kinase [Staphylococcus aureus A9635] gi|257845352|gb|EEV69387.1| thymidylate kinase [Staphylococcus aureus A9635] Length = 210 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 9 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGKI+LCDR++DSS AYQG + +L E ++ Sbjct: 66 TEAMLFAASRREHLVLKVIPALKEGKIVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|89101171|ref|ZP_01174003.1| thymidylate kinase [Bacillus sp. NRRL B-14911] gi|89084106|gb|EAR63275.1| thymidylate kinase [Bacillus sp. NRRL B-14911] Length = 212 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 82/226 (36%), Positives = 122/226 (53%), Gaps = 18/226 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG EGAGKTT I++L L + Y V TREPGG AE R V+L Sbjct: 2 MDKGLFITAEGPEGAGKTTIINMLASGLADEGYKVMQTREPGGIEIAEQIRAVILDTKNT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 EA+++AAAR H+ ++PAL EG I+LCDRF+DSS AYQG ++ L +D Sbjct: 62 AMDPRTEALLYAAARRQHLAEKVQPALDEGYIVLCDRFIDSSLAYQG---YARGLGIDEV 118 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ +++ +MP+ T+ D+ GL+R+ R RE LD + + H K R+ + Sbjct: 119 YSINHFAIEGMMPELTLYFDIDPASGLQRI-GRNQGREVNRLDL---ESLEFHTKVREGY 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 + PDR +D++ + V++L R+ L + K Sbjct: 175 EILLAKFPDRISRIDASLPVEE--------VYQLASARLKSLFADK 212 >gi|223932402|ref|ZP_03624404.1| dTMP kinase [Streptococcus suis 89/1591] gi|302023623|ref|ZP_07248834.1| thymidylate kinase [Streptococcus suis 05HAS68] gi|330832635|ref|YP_004401460.1| dTMP kinase [Streptococcus suis ST3] gi|223898856|gb|EEF65215.1| dTMP kinase [Streptococcus suis 89/1591] gi|329306858|gb|AEB81274.1| dTMP kinase [Streptococcus suis ST3] Length = 212 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 117/208 (56%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEG +GAGKTT + L LQ +V TREPGG AE R+++L+ Sbjct: 1 MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++F AAR H++ I P L +GK+LL DRF+DSS AYQG + L Sbjct: 61 EMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ R + R+ LD E+ D +H + RQ +L+I Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD--MHRRVRQGYLNI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D++ ++V + L ++ Sbjct: 177 LEQEPERFVKIDASQPLEAVVADALAVI 204 >gi|78044441|ref|YP_358922.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901] gi|123577218|sp|Q3AG12|KTHY_CARHZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77996556|gb|ABB15455.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901] Length = 203 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 16/208 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG+EG+GKTT I + R+L KN +TREPGGT + R +LL+ Sbjct: 3 GKFITIEGVEGSGKTTQIQYIARYLTEKNIPHIITREPGGTALGKKIRELLLNPSYPVV- 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE +++ A R HV I P L +G ++ DR+ DS+ AYQG L S Sbjct: 62 PEAEILLYLADRAQHVGEKIIPHLDKGVWVISDRYFDSTLAYQGYGRGFDLTLLKSFIAF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + ++PD T+++DLP ++GL RV+ R D ER+ + H++ R+ FL +AR+ Sbjct: 122 ATKGLIPDLTVLIDLPPEVGLSRVKGR------GEYDRLERETLEFHQRVREGFLQLARD 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 Q R +VD + I WE+ Sbjct: 176 Q--RFRVVDGRKKPE-------EIFWEI 194 >gi|227529519|ref|ZP_03959568.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540] gi|227350604|gb|EEJ40895.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540] Length = 213 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 120/210 (57%), Gaps = 10/210 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +G FISFEG +GAGKT+ I+ ++ L+++ V TREPGG +E R VL Sbjct: 2 AGKFISFEGPDGAGKTSVITAIQAELEQQLGKEKVMYTREPGGNHISEQVRRVLFDEHNT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLD 118 + EA++FAAAR H+ + I PAL +GK++LCDR++DSS AYQ G Q ++ Sbjct: 62 DMDGRTEALLFAAARRQHIVSEILPALKDGKVILCDRYVDSSIAYQVAGRHLGEQKIW-- 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + ++ ++PD TI LD+ +GL+R+ + ++ + + + H+ R+ FL Sbjct: 120 QINQYAIDGLLPDLTIYLDIESKLGLQRIAE----HRADQVNRLDEEQLSFHKTVREAFL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + R P+R ++D++ S V +++ + Sbjct: 176 RLQRENPERIKLIDASQSLPKVISDVKQTI 205 >gi|218283200|ref|ZP_03489270.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989] gi|218216018|gb|EEC89556.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989] Length = 212 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 119/214 (55%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+FEG +G+GKTT ++ L + YD TREPGG+ AE+ R++LL Sbjct: 3 MKQGVFITFEGNDGSGKTTVCKAVQEELIKMGYDCIYTREPGGSKIAESIRNILLDVNNT 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R H++ V+ PAL KI+LCDRF+DSS AYQG + + Sbjct: 63 EMDDRTEALLYAASRRQHLKEVVLPALENKKIVLCDRFIDSSLAYQGIARGIGLKEVWDI 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ MP+ T+ L + V+ G KR+ R L+ ++++ H+ RQ + + Sbjct: 123 NQFAIDGCMPEKTLFLSVSVETGKKRMNLRGD------LNRLDQEESSFHKAVRQGYETL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ + V + + V +++++ Sbjct: 177 VSMYPERIEVIDAEPCKEEVLKSAMECVLKVIKE 210 >gi|88705167|ref|ZP_01102879.1| Thymidylate kinase [Congregibacter litoralis KT71] gi|88700862|gb|EAQ97969.1| Thymidylate kinase [Congregibacter litoralis KT71] Length = 244 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 107/201 (53%), Gaps = 6/201 (2%) Query: 12 IEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71 I GAGK+T +S ++ L+ D+ TREPGGT E R LL+ AE ++ Sbjct: 42 IFGAGKSTAMSYIEERLRDAGVDLICTREPGGTSLGEQLRETLLAPTEAGIAPLAELLMM 101 Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131 AAR H+ I PAL G+ +LCDRF D++YAYQG + + L+E ++ PD Sbjct: 102 FAARAQHLSECILPALRRGQWVLCDRFTDATYAYQGAGRNMGEAPVALLEEFVQGDLRPD 161 Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 T++LD+P D+GL R + R LD FE +D+ E+ RQ +L AR R I+ Sbjct: 162 VTLLLDVPADLGLSRARGR------GALDRFELEDLAFFERVRQSYLSRARRSSGRYQII 215 Query: 192 DSAHSFQSVATNILNIVWELV 212 D++ V + +V +L+ Sbjct: 216 DASAELADVERALQAVVKDLI 236 >gi|327490146|gb|EGF21934.1| thymidylate kinase [Streptococcus sanguinis SK1058] Length = 212 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGNGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|282915799|ref|ZP_06323567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139] gi|283768917|ref|ZP_06341826.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19] gi|282320290|gb|EFB50632.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139] gi|283461098|gb|EFC08184.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19] Length = 210 Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 9 FITFEGPEGSGKTTVINEVYHRLA-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 66 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|229819159|ref|YP_002880685.1| thymidylate kinase [Beutenbergia cavernae DSM 12333] gi|229565072|gb|ACQ78923.1| thymidylate kinase [Beutenbergia cavernae DSM 12333] Length = 210 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 26/219 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F+SFEG +GAGKTT + LL ++++ +V TREPGGT R ++L ++ Sbjct: 7 GVFVSFEGGDGAGKTTQLELLATWIEQAGREVVRTREPGGTAIGRTLRDLVLHG--EDVD 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++A R HV +++RPAL G ++L DR++DSS AYQ + L D ++ + Sbjct: 65 ARTEALLYATDRAHHVASLVRPALARGAVVLTDRYVDSSLAYQA---GGRELAADDVRRL 121 Query: 124 SVQEV---MPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 S+ V MPD TI+LDL P + R +A D ER H + R+ +L Sbjct: 122 SMWAVDGLMPDVTILLDLDPAHL---------PARLTAAPDRLERAGSAFHVRTREAYLG 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 +A +P+R ++D+A +A V+ RV+P Sbjct: 173 LAAREPERWLVLDAALGRAELAAQ--------VRARVAP 203 >gi|256826256|ref|YP_003150216.1| thymidylate kinase [Kytococcus sedentarius DSM 20547] gi|256689649|gb|ACV07451.1| thymidylate kinase [Kytococcus sedentarius DSM 20547] Length = 213 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 115/214 (53%), Gaps = 12/214 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 GLF++ EG +GAGK+T I LL L Q +V VTREPGGT R +LL Sbjct: 5 GHGLFVALEGGDGAGKSTQIRLLVEHLAGQHAGREVVVTREPGGTDLGRRIRELLLHG-- 62 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D AEA++FAA R HVE+++RPAL G +++ DR++DSS AYQG + + S Sbjct: 63 DHVAPRAEALLFAADRAHHVESLVRPALDRGAVVVGDRYVDSSIAYQGAGRDLDAVEVAS 122 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + ++PD T++LD VD R R A D E + HE+ RQ FLD Sbjct: 123 ISRWATEGLVPDLTVLLD--VDPATGRS------RRGAEHDRLEAEPTAFHERVRQHFLD 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A P R ++D++ Q + + V L++ Sbjct: 175 LAAAAPQRYLVLDASRPPQELGAEVARAVDGLLE 208 >gi|73663583|ref|YP_302364.1| thymidylate kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123641634|sp|Q49UZ1|KTHY_STAS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72496098|dbj|BAE19419.1| thymidylate kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 205 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 12/214 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I + + L+ + Y V +TREPGG E R VLL D+ Sbjct: 4 FITFEGPEGSGKTTVIQQVAQKLENQ-YSVVLTREPGGVKTGEQIREVLLEG--DDMDDR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + P+L GK++LCDR++DSS AYQG + S+ E ++ Sbjct: 61 TEALLFAASRREHLVGKVIPSLENGKLVLCDRYIDSSLAYQGYARGIGIEEVKSINEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ V +G +R+ L+ + +++DV HEK + + I N+ Sbjct: 121 NGLYPDITIYLDVSVAVGRERI-----LKNQRNQNRLDQEDVKFHEKVVEGYKKIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 +R ++++ S V +N +E + K + L Sbjct: 176 ERFIVIEADRSIDEV----VNATYESISKYLEKL 205 >gi|297207416|ref|ZP_06923855.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910375|ref|ZP_07127828.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70] gi|296887979|gb|EFH26873.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300888364|gb|EFK83551.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70] Length = 208 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 7 FITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 64 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 124 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 178 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 179 QRFKSVNADQPLENVVEDTYQTIIKYLEK 207 >gi|228982456|ref|ZP_04142715.1| Thymidylate kinase [Bacillus thuringiensis Bt407] gi|228776639|gb|EEM24947.1| Thymidylate kinase [Bacillus thuringiensis Bt407] Length = 206 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 115/198 (58%), Gaps = 17/198 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+S EG EG+GK+ I L +L+ + + +REPGG AE R +++ +E Sbjct: 5 GLFVSIEGGEGSGKSALIQGLSLYLEEQGMECLTSREPGGVKVAEEIRELIME---NEMD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA++FA+AR +H +N I PAL EGKI++CDRF+DSS YQG Q + +D++ I Sbjct: 62 AITEALLFASARREHFKNKISPALTEGKIVICDRFVDSSIVYQG---YVQGIGMDNVLSI 118 Query: 124 SVQE----VMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + Q VMP T+ LD+ I L R+ QN RE+ + F+ K + H+K R+ +L Sbjct: 119 NSQALEGLVMPHLTLYLDVEPTIALNRIAQNN---RET---NRFDEKSIEFHKKVREGYL 172 Query: 179 DIARNQPDRCHIVDSAHS 196 I +R VD++ S Sbjct: 173 LIEEKHSNRIKKVDASLS 190 >gi|295694727|ref|YP_003587965.1| thymidylate kinase [Bacillus tusciae DSM 2912] gi|295410329|gb|ADG04821.1| thymidylate kinase [Bacillus tusciae DSM 2912] Length = 209 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+FI+FEG +GAGK+T ++LL LQ+ TREPGGT ++ R +LL E Sbjct: 2 TGVFITFEGPDGAGKSTQVALLASRLQKACIRCITTREPGGTTISDKIRGILLDPHHREM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA+R V IRP L G +++CDR++D+S AYQG + L L Sbjct: 62 TPRTEALLYAASRAQLVGEFIRPHLERGDVVICDRYVDASLAYQGALGLDRK-ELARLNH 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T ++D+P D+GL RV+ R+S+ +D E + + HE R+ FL A+ Sbjct: 121 WATDGLEPLRTYLIDVPADVGLDRVRTRHSM--YGVMDRIEERSIEYHEAVRRWFLGQAQ 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R ++D + V+ I V L+ Sbjct: 179 TSP-RYRVIDGTMPPEMVSEAIWRDVKSLLN 208 >gi|158339115|ref|YP_001520292.1| thymidylate kinase [Acaryochloris marina MBIC11017] gi|189028825|sp|B0C3N6|KTHY_ACAM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|158309356|gb|ABW30973.1| thymidylate kinase [Acaryochloris marina MBIC11017] Length = 231 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 114/221 (51%), Gaps = 17/221 (7%) Query: 4 GLFISFEGIEGAGKTTHISL-------------LKRFLQRKNYDVHVTREPGGTPAAEAA 50 G FI FEG EGAGKTT ++L +K ++Q V TREPGGT ++ Sbjct: 3 GKFIVFEGGEGAGKTTQLNLVFEWLTGSGWTNRIKGYIQGDYPSVLTTREPGGTALGKSI 62 Query: 51 RHVLL---SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 R +LL + G + AE ++FAA R HV + + P L +G ++LCDR+ DS+ AYQG Sbjct: 63 RKLLLDVTATGNESIDERAELLLFAADRAQHVSSCLLPHLQQGALVLCDRYTDSTIAYQG 122 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + L +I+ Q ++ D T LD+ + GL R +R E D E ++ Sbjct: 123 YGRELDLTLIHQLNQIATQGLVSDLTFWLDIDPEFGLARTHDREQDPEIET-DRMEANEI 181 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 H++ RQ F D+AR P+R +++ S VA I I+ Sbjct: 182 AFHQRLRQGFADLARQHPERIFRIEAHQSDDVVAQQIQGIL 222 >gi|282918262|ref|ZP_06326002.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427] gi|282317828|gb|EFB48197.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427] Length = 210 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 9 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 66 TEAMLFAASRREHLVLKVVPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|85374070|ref|YP_458132.1| thymidylate kinase [Erythrobacter litoralis HTCC2594] gi|84787153|gb|ABC63335.1| thymidylate kinase [Erythrobacter litoralis HTCC2594] Length = 212 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 106/213 (49%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T LL L + + VTREPGGT AEA R +LL D Sbjct: 1 MTRGRFIALEGGEGTGKSTQARLLAEALSTRGIECVVTREPGGTEGAEAIRRLLLDPPGD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +G AEA++FAAAR DHVE +I PAL G ++ DRFLDSS AYQG + +L Sbjct: 61 GWGPRAEALLFAAARSDHVEKLILPALERGAWVVSDRFLDSSRAYQGGAGGIGDQAVRTL 120 Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +I + PD T+++++ P I R + R+ D + H F Sbjct: 121 HDIGSGGLRPDLTVLIEVEPATI-----AERLADRDGNRSDAIGGRSAQYHADVAASFKR 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P +VD + V + IL + L+ Sbjct: 176 FAAEDPGGFAVVDGEGTPDEVHSRILEAIEPLI 208 >gi|325978913|ref|YP_004288629.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178841|emb|CBZ48885.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 210 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 116/215 (53%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ +IGL R+ + + RE LD E+ D +H++ R+ +L + Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVREGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A Q R +D++ V + L I+ E + K+ Sbjct: 177 A-EQEKRIVTIDASRELADVVSETLQIILEQLAKK 210 >gi|317407094|gb|EFV87102.1| tmk protein [Achromobacter xylosoxidans C54] Length = 207 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 10/214 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+ EG++GAGK+TH + FL+ + +V TREPGGTP E R ++L+ D Sbjct: 3 SRGRFITLEGVDGAGKSTHTEWIAEFLRGQGLEVVSTREPGGTPLGEKLRALVLT---DP 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + E ++ AAR +H+ VI PAL G ++CDR+ D++YAYQG + +L Sbjct: 60 MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGAERVAAL- 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E +Q PD T + D+P+++ R+ + RE D FER+ E+ R + A Sbjct: 119 ETWMQAGRPDRTWLFDVPLEVARARLAD---AREP---DRFEREGAAFFERTRAAYQARA 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +PDR ++DS + ++ + + ELV R Sbjct: 173 AAEPDRIRVIDSTRAIAAIRAELEAGLRELVAVR 206 >gi|50365491|ref|YP_053916.1| thymidylate kinase [Mesoplasma florum L1] gi|59798247|sp|Q6F0E1|KTHY_MESFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|50364047|gb|AAT76032.1| thymidylate kinase [Mesoplasma florum L1] Length = 211 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 9/211 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG++G+GKTT + +K++L+ NY V +TREPGG P +E R ++L+ D G Sbjct: 1 MFITIEGMDGSGKTTALQRVKQYLEDLNYKVVMTREPGGLPLSEKIRELILNK--DGVGM 58 Query: 65 E--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E EA++F AAR +H+E VI+P L +G I++ DRF+DS+ AYQG +L+ LQ+ Sbjct: 59 EPWTEALLFIAARKEHLEKVIKPYLKKGYIVISDRFMDSTTAYQGGARGLGVDYLNELQK 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +PD T+ +L + KR+ R E LD RK E + F ++ Sbjct: 119 NILEGFLPDLTLYFELSFEDAEKRLSARPE--EKNRLDEEGRK---FKEAVKLAFEELVV 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P+R ++D++ S + V ++ E ++ Sbjct: 174 KEPNRITVIDASKSPEEVFEETKKVILEKIE 204 >gi|161508727|ref|YP_001574386.1| thymidylate kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253735215|ref|ZP_04869380.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130] gi|297591609|ref|ZP_06950246.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8] gi|304380498|ref|ZP_07363175.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|160367536|gb|ABX28507.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726775|gb|EES95504.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130] gi|297575478|gb|EFH94195.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8] gi|304340943|gb|EFM06866.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436430|gb|ADQ75501.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH60] gi|320139433|gb|EFW31311.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144210|gb|EFW35978.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA177] Length = 208 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 7 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 64 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 124 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 178 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 179 QRFKSVNADQPLENVVEDTYQTIIKYLEK 207 >gi|297621242|ref|YP_003709379.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044] gi|297376543|gb|ADI38373.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044] Length = 199 Score = 125 bits (313), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 15/205 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FIS EG EG+GKTT I L +L+ K V +TREPGGT E+ R VLL F Sbjct: 2 MFISVEGGEGSGKTTLIRNLAEYLESKGDQVLITREPGGTRFGESLRKVLLDPEFPAAFN 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AE ++F AAR+ H+E VI+PAL +GK ++CDRF DS+ AYQG + L + ++++ Sbjct: 62 ARAEMLLFLAARVQHIEEVIQPALRKGKTVICDRFNDSTIAYQG---GGRELGVVRVEQL 118 Query: 124 SVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T +LD+ + +R+ NR D E++ H K R F + Sbjct: 119 CFEVCDGFQPDKTFVLDINPETAFQRL-NRSK-------DRMEKESFDFHNKVRSAFYAL 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 P+R H++++ S + V ++L Sbjct: 171 KDKHPNRIHLINADQSKEKVLADVL 195 >gi|78188893|ref|YP_379231.1| thymidylate kinase [Chlorobium chlorochromatii CaD3] gi|123579949|sp|Q3AS37|KTHY_CHLCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78171092|gb|ABB28188.1| thymidylate kinase [Chlorobium chlorochromatii CaD3] Length = 222 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 75/220 (34%), Positives = 122/220 (55%), Gaps = 6/220 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T ++ L +L++++ + REPGGTP AE+ R +LL Sbjct: 1 MLITFEGIDGAGKSTQVAKLVAYLKQQSTPLLSLREPGGTPTAESIRSLLLD-NRKSITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F+A+R + VE +IRPAL EGK ++ DRF DS+ AYQG L S+ +S Sbjct: 60 IAELLLFSASRAELVETLIRPALAEGKTVILDRFFDSTTAYQGHGRGISLEQLHSIIALS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKRRQIFLD 179 +++PD T LDL + L+R +R L +S D E+ + + K R +L Sbjct: 120 TGDLLPDVTFYLDLEPEEALRRAFSRSGLPLDFAAQSNESDRMEQAGIAFYHKVRNGYLT 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + + P R +D+ ++ +I+ V ++ +SPL Sbjct: 180 LMQQHPSRFVALDATQPPDTLHQHIIAEVETRLKLHISPL 219 >gi|151220658|ref|YP_001331480.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. Newman] gi|257424593|ref|ZP_05601021.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427259|ref|ZP_05603660.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429895|ref|ZP_05606281.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397] gi|257432598|ref|ZP_05608960.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410] gi|257435503|ref|ZP_05611553.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876] gi|257794277|ref|ZP_05643256.1| thymidylate kinase [Staphylococcus aureus A9781] gi|258407206|ref|ZP_05680351.1| thymidylate kinase [Staphylococcus aureus A9763] gi|258420828|ref|ZP_05683764.1| thymidylate kinase [Staphylococcus aureus A9719] gi|258429598|ref|ZP_05688272.1| thymidylate kinase [Staphylococcus aureus A9299] gi|258446131|ref|ZP_05694292.1| thymidylate kinase [Staphylococcus aureus A6300] gi|258448039|ref|ZP_05696169.1| thymidylate kinase [Staphylococcus aureus A6224] gi|258452837|ref|ZP_05700832.1| thymidylate kinase [Staphylococcus aureus A5948] gi|258453814|ref|ZP_05701787.1| thymidylate kinase [Staphylococcus aureus A5937] gi|282895088|ref|ZP_06303308.1| thymidylate kinase [Staphylococcus aureus A8117] gi|282903066|ref|ZP_06310958.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160] gi|282904857|ref|ZP_06312717.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907803|ref|ZP_06315642.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910120|ref|ZP_06317926.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913308|ref|ZP_06321099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899] gi|282923013|ref|ZP_06330699.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101] gi|282925555|ref|ZP_06333208.1| thymidylate kinase [Staphylococcus aureus A9765] gi|283957270|ref|ZP_06374728.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97] gi|293500358|ref|ZP_06666210.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424] gi|293509296|ref|ZP_06668012.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809] gi|293515884|ref|ZP_06670574.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015] gi|150373458|dbj|BAF66718.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. Newman] gi|257272620|gb|EEV04740.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275910|gb|EEV07378.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279411|gb|EEV10006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397] gi|257282463|gb|EEV12596.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410] gi|257285140|gb|EEV15257.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876] gi|257788249|gb|EEV26589.1| thymidylate kinase [Staphylococcus aureus A9781] gi|257841164|gb|EEV65613.1| thymidylate kinase [Staphylococcus aureus A9763] gi|257843220|gb|EEV67633.1| thymidylate kinase [Staphylococcus aureus A9719] gi|257849657|gb|EEV73624.1| thymidylate kinase [Staphylococcus aureus A9299] gi|257855108|gb|EEV78050.1| thymidylate kinase [Staphylococcus aureus A6300] gi|257858729|gb|EEV81602.1| thymidylate kinase [Staphylococcus aureus A6224] gi|257859523|gb|EEV82376.1| thymidylate kinase [Staphylococcus aureus A5948] gi|257863985|gb|EEV86740.1| thymidylate kinase [Staphylococcus aureus A5937] gi|282314532|gb|EFB44919.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101] gi|282322779|gb|EFB53099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899] gi|282325968|gb|EFB56274.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328318|gb|EFB58592.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331974|gb|EFB61483.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260] gi|282592459|gb|EFB97471.1| thymidylate kinase [Staphylococcus aureus A9765] gi|282596492|gb|EFC01452.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160] gi|282762506|gb|EFC02646.1| thymidylate kinase [Staphylococcus aureus A8117] gi|283791194|gb|EFC30004.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97] gi|290921292|gb|EFD98350.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015] gi|291096318|gb|EFE26578.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424] gi|291467841|gb|EFF10351.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809] Length = 210 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 9 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 66 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 126 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 180 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 181 QRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|21282166|ref|NP_645254.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MW2] gi|49485346|ref|YP_042567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MSSA476] gi|23821762|sp|Q8NY05|KTHY_STAAW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56748991|sp|Q6GC06|KTHY_STAAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21203602|dbj|BAB94302.1| tmk [Staphylococcus aureus subsp. aureus MW2] gi|49243789|emb|CAG42214.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus MSSA476] Length = 205 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 4 FITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204 >gi|223939277|ref|ZP_03631158.1| dTMP kinase [bacterium Ellin514] gi|223892109|gb|EEF58589.1| dTMP kinase [bacterium Ellin514] Length = 213 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 10/220 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59 M GL ISFEG EG GK+T ISLL L+ + + + REPGGTP E R+ L S Sbjct: 1 MKKGLLISFEGTEGCGKSTQISLLTERLRALGHVIRMVREPGGTPIGEEIRYTLKHSVKN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +EAE ++ A+R V V+RPAL G+I++CDR+ DS+ AYQG + + Sbjct: 61 HAMTSEAELLLMNASRAQLVREVLRPALEAGEIIVCDRYYDSTTAYQGYGRGLDLKLVQA 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +V + PD T++L +P ++ R+ +R + D E D + Q + Sbjct: 121 VIDFAVGDTRPDLTLLLRVPPEVSAARLASRQATL-PFIRDRIEEADQSFFNRVSQGYEA 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 +A P+R +D++ S Q+V+ +I W RV PL Sbjct: 180 LATAHPERIQTIDASSSVQNVSDSI----W----SRVKPL 211 >gi|18978102|ref|NP_579459.1| thymidylate kinase [Pyrococcus furiosus DSM 3638] gi|23821777|sp|Q8U071|KTHY_PYRFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|18893897|gb|AAL81854.1| thymidylate kinase (tmk) [Pyrococcus furiosus DSM 3638] Length = 210 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 120/217 (55%), Gaps = 15/217 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI EGI+G+GKTT LL R+ + + V +T+EP T + R ++L + Sbjct: 1 MKRGLFIVLEGIDGSGKTTQARLLARWFEDNGFKVVLTKEPTDTEFGKIIRKLVLEGSII 60 Query: 61 EFG---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + G EAEA++FAA R +HV+ +I PAL EGK+++ DR+ SS AYQ R L L Sbjct: 61 DGGRISLEAEALLFAADRAEHVKKIIEPALREGKVVISDRYFYSSLAYQWARG----LNL 116 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L EI+ PD I+LD+P G+KR++ R S E L + EK R+ + Sbjct: 117 EWLIEINKFAPHPDIAILLDIPPREGIKRIKKRSSQTEFDKL-------FKLQEKVRENY 169 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +A+ D I+D+ S + V I++ + E+ K Sbjct: 170 IKLAK-MFDEIKIIDATKSVEEVHREIISSIKEIWGK 205 >gi|330428264|gb|AEC19598.1| Thymidylate kinase [Pusillimonas sp. T7-7] Length = 216 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GL I +G GAGK T + ++ FL +V +TREPGGT E R +LL Sbjct: 1 MNKGLMIVVDGGNGAGKGTCLHDIEAFLSGLGLEVVMTREPGGTAIGEQIREILLDKSAV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++FAAAR HV I PA+ GK+++ DRF ++ ++Q ++SL Sbjct: 61 EMCDVTELMLFAAARAQHVRQKIVPAINAGKVVVSDRFDSATISFQHYARGLDLELINSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+V + PD TIILDL +GL+RV +R S D E++++ E+ RQ ++ Sbjct: 121 NDIAVAGLRPDFTIILDLDPAVGLQRVASRGS-----DFDRLEKENLSFLERARQGYIKQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A P R VD++ SF V +L +V +++ + Sbjct: 176 ALADPQRFATVDASQSFDQVRHEVLQLVEQVIAR 209 >gi|325687059|gb|EGD29082.1| thymidylate kinase [Streptococcus sanguinis SK72] Length = 212 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVWPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|229094752|ref|ZP_04225758.1| Thymidylate kinase [Bacillus cereus Rock3-29] gi|229113705|ref|ZP_04243141.1| Thymidylate kinase [Bacillus cereus Rock1-3] gi|228669702|gb|EEL25108.1| Thymidylate kinase [Bacillus cereus Rock1-3] gi|228688620|gb|EEL42492.1| Thymidylate kinase [Bacillus cereus Rock3-29] Length = 208 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ +IGL R++ RE LD +D+ H++ R+ +L+ Sbjct: 119 INRFATEDCMPSVTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|300811154|ref|ZP_07091666.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497858|gb|EFK32868.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 212 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 119/206 (57%), Gaps = 12/206 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG +GAGKTT I+ + + +Q + ++ VTREPGG+ AE R ++L E Sbjct: 3 GYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AA+R HV +I PAL G +++ DRF+DSS AYQG+ + L +D + + Sbjct: 63 NAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQ---GRGLGIDEVAQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + PD TI LDL GL R+ S E D E++ + HE+ + + Sbjct: 120 INAFATGYLEPDLTIFLDLDPAQGLARIAKVRSGSE----DRLEQEKLSFHEEVYRGYQK 175 Query: 180 IARNQPDRCHIVDSAHSF-QSVATNI 204 + + PDR +VD++ Q VA ++ Sbjct: 176 VNQAHPDRVKVVDASQDLPQVVAASV 201 >gi|229027878|ref|ZP_04184033.1| Thymidylate kinase [Bacillus cereus AH1271] gi|228733392|gb|EEL84219.1| Thymidylate kinase [Bacillus cereus AH1271] Length = 208 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ +IGL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +VD+ + + ++ I+ Sbjct: 175 VVERFSDRIVLVDADQPMEKLIEEVVQII 203 >gi|325137927|gb|EGC60502.1| thymidylate kinase [Neisseria meningitidis ES14902] Length = 206 Score = 124 bits (312), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 118/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP E R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200 >gi|15923472|ref|NP_371006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50] gi|15926159|ref|NP_373692.1| thymidylate kinase [Staphylococcus aureus subsp. aureus N315] gi|49482709|ref|YP_039933.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA252] gi|57651363|ref|YP_185412.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL] gi|82750189|ref|YP_415930.1| thymidylate kinase [Staphylococcus aureus RF122] gi|87162349|ref|YP_493168.1| thymidylate kinase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194238|ref|YP_499030.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148266940|ref|YP_001245883.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH9] gi|150392986|ref|YP_001315661.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1] gi|156978810|ref|YP_001441069.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu3] gi|221142326|ref|ZP_03566819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315924|ref|ZP_04839137.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730948|ref|ZP_04865113.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255005275|ref|ZP_05143876.2| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|262049967|ref|ZP_06022826.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30] gi|262052513|ref|ZP_06024710.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3] gi|269202101|ref|YP_003281370.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98] gi|284023491|ref|ZP_06377889.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 132] gi|294850341|ref|ZP_06791074.1| thymidylate kinase [Staphylococcus aureus A9754] gi|295407370|ref|ZP_06817167.1| thymidylate kinase [Staphylococcus aureus A8819] gi|295427016|ref|ZP_06819653.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276563|ref|ZP_06859070.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MR1] gi|297246450|ref|ZP_06930290.1| thymidylate kinase [Staphylococcus aureus A8796] gi|54037703|sp|P65249|KTHY_STAAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|54041417|sp|P65248|KTHY_STAAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56749045|sp|Q6GJI9|KTHY_STAAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920829|sp|Q5HIJ5|KTHY_STAAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122540513|sp|Q2G230|KTHY_STAA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123487157|sp|Q2FJG0|KTHY_STAA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123548600|sp|Q2YVW3|KTHY_STAAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223118|sp|A7WYM2|KTHY_STAA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030842|sp|A6TYV6|KTHY_STAA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030843|sp|A5IQ34|KTHY_STAA9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|93279034|pdb|2CCJ|A Chain A, Crystal Structure Of S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate gi|93279035|pdb|2CCJ|B Chain B, Crystal Structure Of S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate gi|93279036|pdb|2CCK|A Chain A, Crystal Structure Of Unliganded S. Aureus Thymidylate Kinase gi|93279037|pdb|2CCK|B Chain B, Crystal Structure Of Unliganded S. Aureus Thymidylate Kinase gi|13700372|dbj|BAB41670.1| tmk [Staphylococcus aureus subsp. aureus N315] gi|14246250|dbj|BAB56644.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus Mu50] gi|49240838|emb|CAG39505.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA252] gi|57285549|gb|AAW37643.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL] gi|82655720|emb|CAI80119.1| thymidylate kinase [Staphylococcus aureus RF122] gi|87128323|gb|ABD22837.1| thymidylate kinase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201796|gb|ABD29606.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740009|gb|ABQ48307.1| thymidylate kinase [Staphylococcus aureus subsp. aureus JH9] gi|149945438|gb|ABR51374.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1] gi|156720945|dbj|BAF77362.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus Mu3] gi|253725298|gb|EES94027.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|259159560|gb|EEW44607.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3] gi|259161902|gb|EEW46485.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30] gi|262074391|gb|ACY10364.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98] gi|269940053|emb|CBI48429.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus TW20] gi|283469774|emb|CAQ48985.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ST398] gi|285816181|gb|ADC36668.1| Thymidylate kinase [Staphylococcus aureus 04-02981] gi|294822765|gb|EFG39201.1| thymidylate kinase [Staphylococcus aureus A9754] gi|294967727|gb|EFG43759.1| thymidylate kinase [Staphylococcus aureus A8819] gi|295129019|gb|EFG58648.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297176637|gb|EFH35899.1| thymidylate kinase [Staphylococcus aureus A8796] gi|298693811|gb|ADI97033.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED133] gi|302750372|gb|ADL64549.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312828977|emb|CBX33819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128606|gb|EFT84609.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS03] gi|315193841|gb|EFU24235.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS00] gi|315196161|gb|EFU26517.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS01] gi|323438403|gb|EGA96161.1| thymidylate kinase [Staphylococcus aureus O11] gi|323441265|gb|EGA98936.1| thymidylate kinase [Staphylococcus aureus O46] gi|329313200|gb|AEB87613.1| Thymidylate kinase [Staphylococcus aureus subsp. aureus T0131] gi|329725071|gb|EGG61566.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21172] gi|329729774|gb|EGG66171.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21189] gi|329731077|gb|EGG67449.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21193] Length = 205 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 4 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204 >gi|93279032|pdb|2CCG|A Chain A, Crystal Structure Of His-Tagged S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) gi|93279033|pdb|2CCG|B Chain B, Crystal Structure Of His-Tagged S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) Length = 225 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 24 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 80 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 81 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 140 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 141 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 195 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 196 QRFKSVNADQPLENVVEDTYQTIIKYLEK 224 >gi|324991362|gb|EGC23295.1| thymidylate kinase [Streptococcus sanguinis SK353] Length = 212 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|255065851|ref|ZP_05317706.1| dTMP kinase [Neisseria sicca ATCC 29256] gi|255049762|gb|EET45226.1| dTMP kinase [Neisseria sicca ATCC 29256] Length = 208 Score = 124 bits (312), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T++++++R+ + + V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIRRWFESHDLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARQQHLEDVILPALADGIHVVSDRFTDATFAYQGGGRGVPLQDIEMLENWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T++LD+P+++ + R+ RE D FE++ + R ++L+ A P Sbjct: 124 GGFGPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFTRVRAVYLERAAAHP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D S + V +I Sbjct: 178 ERYALIDGNRSLEEVRADI 196 >gi|229159205|ref|ZP_04287230.1| Thymidylate kinase [Bacillus cereus R309803] gi|228624220|gb|EEK81021.1| Thymidylate kinase [Bacillus cereus R309803] Length = 208 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + DR +V++ + + ++ I+ E Sbjct: 175 VVERFSDRIVVVNADQPMEQLIEEVVQIIEE 205 >gi|146318315|ref|YP_001198027.1| thymidylate kinase [Streptococcus suis 05ZYH33] gi|145689121|gb|ABP89627.1| Thymidylate kinase [Streptococcus suis 05ZYH33] gi|292558109|gb|ADE31110.1| Thymidylate kinase [Streptococcus suis GZ1] Length = 222 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 118/216 (54%), Gaps = 4/216 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEG +GAGKTT + L LQ +V TREPGG AE R+++L+ Sbjct: 11 MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++F AAR H++ I P L +GK+LL DRF+DSS AYQG + L Sbjct: 71 AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ R + R+ LD E+ D +H + RQ +L I Sbjct: 131 NQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD--MHRRVRQGYLSI 186 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+R +D++ ++V N L ++ + +R Sbjct: 187 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAERT 222 >gi|332109434|gb|EGJ10357.1| thymidylate kinase / thymidylate synthase [Rubrivivax benzoatilyticus JA2] Length = 205 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 9/204 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G F+SFEGI+GAGK++HI L +L+ + +V VTREPGGT AE R ++L +D Sbjct: 1 MTAGRFLSFEGIDGAGKSSHIEWLAGWLRERGREVLVTREPGGTELAERLRELVLHQPMD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA++ AAR DH+ I PAL G ++LCDRF D+++AYQG L +L Sbjct: 61 ---ALTEALLVFAARRDHLATRIEPALAAGAVVLCDRFTDATFAYQGAGRGFDLGVLATL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q PD T+ DLP D FE +D E+ R + Sbjct: 118 ETWVQQGRQPDLTVWFDLPT------AVAAARRAAVRAPDRFESQDEAFFERVRSGYARR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A P R I+D+A + +V + Sbjct: 172 AAADPGRFVILDAAATPDAVRAQL 195 >gi|125718521|ref|YP_001035654.1| thymidylate kinase [Streptococcus sanguinis SK36] gi|166223121|sp|A3CPJ9|KTHY_STRSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|125498438|gb|ABN45104.1| Thymidylate kinase, putative [Streptococcus sanguinis SK36] Length = 212 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|118602262|ref|YP_903477.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166223114|sp|A1AVP9|KTHY_RUTMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118567201|gb|ABL02006.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 205 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 113/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ +G+EG+GK+T I + +L K +V +TREPGGT E R +LLS + Sbjct: 1 MQRGKFITIDGVEGSGKSTQIDFICDYLVTKKINVILTREPGGTELGEKIRTLLLSTDIQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR +H+ I P+L +G +L DRF D+SYAYQG + L Sbjct: 61 SIHGDTELLLLFAARNEHIRTKIIPSLEKGDWVLSDRFTDASYAYQGGGRGLSIERITQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ +Q+ PD T++LD+ V +G+ RV++ R E D+F+R R ++ Sbjct: 121 EKWVLQDFTPDVTLLLDVSVALGMSRVESRGRKDRIELETNDFFKRV--------RNSYI 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 + ++ P R ++D++ + + A I Sbjct: 173 ERSKQFPKRIKLIDASKTLEQTAQQI 198 >gi|322515570|ref|ZP_08068551.1| dTMP kinase [Actinobacillus ureae ATCC 25976] gi|322118373|gb|EFX90639.1| dTMP kinase [Actinobacillus ureae ATCC 25976] Length = 208 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 83/208 (39%), Positives = 117/208 (56%), Gaps = 13/208 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGKTT ++ L++ +V REPGGTP AE RH++ + Sbjct: 3 GKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQIREPGGTPLAEKLRHLIKHETEEAVS 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQ G R +HL L++L+E Sbjct: 63 DKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHL-LETLKE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI LD+ IGL R R L E LD+F R RQ +L++ Sbjct: 122 TVLGKFEPDLTIYLDIDPAIGLARAIGRGELDRIEQQSLDFFYRT--------RQRYLEL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +N ++ I+++ S + VA +I V Sbjct: 174 TQNN-EKAVIINAEQSIEQVAADIQQAV 200 >gi|227533730|ref|ZP_03963779.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188714|gb|EEI68781.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 238 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 113/201 (56%), Gaps = 4/201 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI+FEG +GAGKT+ + +L+ + Q +H+TREPGG +E R V+L Sbjct: 24 MVKGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPAN 83 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AA+R H+ VI+PAL +G I++CDRF+DSS AYQG + Sbjct: 84 TAMDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLK 143 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + P T+ LD+PV +GL R+++ + R+ D +++ + HE+ ++ Sbjct: 144 MNQFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQ---YDRLDQESLAFHERVHDAYMT 200 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 + + P R +D+ + V Sbjct: 201 LIVDNPQRIVSIDATEPLEKV 221 >gi|313891237|ref|ZP_07824855.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026] gi|313120304|gb|EFR43425.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026] Length = 209 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 113/213 (53%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ G I+FEG +GAGKT+ I L L+ N ++ VTREPGG AE+ R V+L Sbjct: 1 MSKGRLITFEGPDGAGKTSVIEGLVPLLENLNQTEIVVTREPGGVSIAESIREVILDVRN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL +G+++L DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEQGQMVLIDRFIDSSVAYQGAGRGLSKKAIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + V PD T+ DL +IGL R+ RE LD + + +H++ R +L+ Sbjct: 121 LNDFATDGVTPDLTLYFDLSPEIGLARIAKNKK-REINRLDM---EKIEMHQQVRNGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ PDR VD+ S V I+ E V Sbjct: 177 LAKEFPDRIVTVDATKSLDEVVAQAFEIIKENV 209 >gi|222152616|ref|YP_002561791.1| thymidylate kinase [Streptococcus uberis 0140J] gi|254808308|sp|B9DTV7|KTHY_STRU0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|222113427|emb|CAR41106.1| thymidylate kinase [Streptococcus uberis 0140J] Length = 211 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+ EG +GAGKT+ + L L++ N + TREPGG +E+ R+++L Sbjct: 1 MTKGKIITLEGPDGAGKTSVLEQLVLKLEKDNEQSIVTTREPGGVAISESIRNIILDVNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + E +++ AAR H+ + P+L GK++ DRF+DSS AYQGE ++ Sbjct: 61 TEMDFKTELLLYIAARRQHLVEKVLPSLSAGKLVFIDRFIDSSVAYQGEGRGLNKSDIEW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + + PD T++ D+P +IG+ R+ N+ RE LD + + +H+K RQ +L+ Sbjct: 121 LNDFATDGIKPDLTLLFDVPSEIGIARI-NQNVNREINRLDL---EKLEMHQKVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A+ PDR ++D++ V ++ E Sbjct: 177 LAKANPDRIVLIDASKPLDDVVDEAYRVIKE 207 >gi|86608314|ref|YP_477076.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)] gi|123503195|sp|Q2JN62|KTHY_SYNJB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|86556856|gb|ABD01813.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 206 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 115/217 (52%), Gaps = 16/217 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EG GKTT +LL L+++ Y TREPGGT + R +LL D F Sbjct: 1 MFITLEGGEGVGKTTQQALLVERLRQEGYACLCTREPGGTALGKTLRELLLHG--DPFSP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++AA R +HV VI PAL G++++CDRF DS+ AYQG + L ++ Sbjct: 59 LAELLLYAADRAEHVSKVIAPALAAGQVVVCDRFTDSTLAYQGYGRGLDLEKIRQLNHLA 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P T+ LDLP ++GL R + R D E++ + H + Q F +A + Sbjct: 119 TGGLQPHLTLWLDLPPEVGLARAKAR---------DRLEQERLEFHRRVYQGFQALAAAE 169 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P R + + S VA + W +V+ R+ PL++ Sbjct: 170 PQRIVRISAQGSPAEVAARL----WSVVEPRL-PLAT 201 >gi|253751477|ref|YP_003024618.1| thymidylate kinase [Streptococcus suis SC84] gi|253753378|ref|YP_003026519.1| thymidylate kinase [Streptococcus suis P1/7] gi|253755793|ref|YP_003028933.1| thymidylate kinase [Streptococcus suis BM407] gi|251815766|emb|CAZ51368.1| thymidylate kinase [Streptococcus suis SC84] gi|251818257|emb|CAZ56065.1| thymidylate kinase [Streptococcus suis BM407] gi|251819624|emb|CAR45362.1| thymidylate kinase [Streptococcus suis P1/7] gi|319757895|gb|ADV69837.1| thymidylate kinase [Streptococcus suis JS14] Length = 212 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 118/216 (54%), Gaps = 4/216 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEG +GAGKTT + L LQ +V TREPGG AE R+++L+ Sbjct: 1 MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++F AAR H++ I P L +GK+LL DRF+DSS AYQG + L Sbjct: 61 AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ R + R+ LD E+ D +H + RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD--MHRRVRQGYLSI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P+R +D++ ++V N L ++ + +R Sbjct: 177 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAERT 212 >gi|242371688|ref|ZP_04817262.1| dTMP kinase [Staphylococcus epidermidis M23864:W1] gi|242350637|gb|EES42238.1| dTMP kinase [Staphylococcus epidermidis M23864:W1] Length = 208 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 114/195 (58%), Gaps = 8/195 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ I+ + + L +++DV TREPGG P E R V+L D Sbjct: 7 FITFEGPEGAGKTSVITKVSQKLA-EDFDVITTREPGGVPTGEEIRRVVLDG--DNMDIR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL +GKI+LCDR++DSS AYQG + +L E ++ Sbjct: 64 TEAMLFAASRREHLVEKVIPALKDGKIVLCDRYIDSSLAYQGYARGIGIEEVQTLNEFAI 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + + +++D HEK + + + P Sbjct: 124 NGLYPDLTIYLDVSAEVGRQRI-----LKNNRDQNRLDQEDKAFHEKVIEGYHKVIEGNP 178 Query: 186 DRCHIVDSAHSFQSV 200 +R V++ + ++V Sbjct: 179 ERFVKVNANQNLENV 193 >gi|116495711|ref|YP_807445.1| thymidylate kinase [Lactobacillus casei ATCC 334] gi|191639199|ref|YP_001988365.1| thymidylate kinase [Lactobacillus casei BL23] gi|122262887|sp|Q035W9|KTHY_LACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238693006|sp|B3W9Y8|KTHY_LACCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116105861|gb|ABJ71003.1| thymidylate kinase [Lactobacillus casei ATCC 334] gi|190713501|emb|CAQ67507.1| Thymidylate kinase (dTMP kinase) [Lactobacillus casei BL23] gi|327383275|gb|AEA54751.1| Thymidylate kinase [Lactobacillus casei LC2W] gi|327386459|gb|AEA57933.1| Thymidylate kinase [Lactobacillus casei BD-II] Length = 214 Score = 124 bits (311), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 4/199 (2%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ + +L+ + Q +H+TREPGG +E R V+L Sbjct: 2 TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL +G I++CDRF+DSS AYQG + + Sbjct: 62 MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P T+ LD+PV +GL R+++ + R+ D +++ + HE+ ++ + Sbjct: 122 QFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQ---YDRLDQESLAFHERVHDAYMTLI 178 Query: 182 RNQPDRCHIVDSAHSFQSV 200 + P R +D+ + V Sbjct: 179 VDNPQRIVSIDATEPLEKV 197 >gi|162147582|ref|YP_001602043.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl 5] gi|209542215|ref|YP_002274444.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5] gi|161786159|emb|CAP55741.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl 5] gi|209529892|gb|ACI49829.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5] Length = 215 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 82/209 (39%), Positives = 111/209 (53%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+FEG EGAGK+T L+ L+ +V TREPGGTP AEA R +LL G D Sbjct: 2 AGLFITFEGGEGAGKSTQAQRLEAHLRAAGREVVRTREPGGTPGAEALRQLLLFGGHD-L 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDS 119 AE + AAR DHV+ +IRPAL G +++CDRF+DS+ AYQG R L L + Sbjct: 61 SLRAEILAHFAARCDHVDQLIRPALARGAVVICDRFIDSTLAYQGYGLGRADPGILHLIA 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + V + PD T++L L L R++ R D +E D H + F Sbjct: 121 VLGAQVG-LAPDLTLVLMLERAGALARLRAR-----GGPADRYEAADEAFHARVADGFDT 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 IAR + RC + + VA +I +V Sbjct: 175 IARAEAGRCVTIAADRPVDVVAGDIARLV 203 >gi|329666793|gb|AEB92741.1| thymidylate kinase [Lactobacillus johnsonii DPC 6026] Length = 213 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 11/209 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKTT I+ ++K+ Q VTREPGG+ +E R ++L E Sbjct: 3 GYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPKNKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG ++L ++ +++ Sbjct: 63 DDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQG---VGRNLGVEEVKQ 119 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ + P+ TI LDL +GL R++ + +E D E++ + H K + + Sbjct: 120 INDFGTGGLEPNLTIFLDLDPAVGLARIEKERAGQE----DRLEQEKIDFHNKVYAGYRE 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + PDR VD+ + VA N + I+ Sbjct: 176 LLERYPDRIKKVDANLPIKDVAANSVKII 204 >gi|325690660|gb|EGD32661.1| thymidylate kinase [Streptococcus sanguinis SK115] Length = 212 Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|297193021|ref|ZP_06910419.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486] gi|197719849|gb|EDY63757.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486] Length = 1039 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 520 SGFFIAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 579 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++VIRPAL G I++ DR++DSS AYQG + + Sbjct: 580 SNRAEALLYAADRAEHVDSVIRPALDRGAIVISDRYIDSSVAYQGAGRDLSPTEIARISR 639 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LD+ + +R + D E + H++ R FL +A Sbjct: 640 WATDGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRSGFLTLAA 691 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ SV T Sbjct: 692 ADPGRYLVVDAGQEPGSVTT 711 >gi|229074092|ref|ZP_04207139.1| Thymidylate kinase [Bacillus cereus Rock4-18] gi|228708986|gb|EEL61112.1| Thymidylate kinase [Bacillus cereus Rock4-18] Length = 208 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 ISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I++ ++ MP TI LD+ +IGL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INLFATEDCMPSVTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|325912933|ref|ZP_08175307.1| dTMP kinase [Lactobacillus iners UPII 60-B] gi|325477747|gb|EGC80885.1| dTMP kinase [Lactobacillus iners UPII 60-B] Length = 213 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 3 GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + L +D +++ Sbjct: 63 NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + + PD TI D+ GL+R+Q E D E+++ + H+K + Sbjct: 120 INEFATRHITPDLTIFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R VD+ S V + + I+ E + Sbjct: 176 LLSAYPERIKRVDAELSIAEVVSQSVKILEEYM 208 >gi|307729688|ref|YP_003906912.1| thymidylate kinase [Burkholderia sp. CCGE1003] gi|307584223|gb|ADN57621.1| thymidylate kinase [Burkholderia sp. CCGE1003] Length = 206 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 115/215 (53%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R R + R+ D FER+ E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFERESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R I+DS+ S + + +++ +L Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEDLLAKL 206 >gi|227510683|ref|ZP_03940732.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189804|gb|EEI69871.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 216 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ ++ +F ++ + VTREPGG +E R V+L E Sbjct: 2 TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL K++LCDR++DSS AYQG + + Sbjct: 62 MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++++P TI D+PV++GL R+ R+S+ +D + + H++ Q ++ + Sbjct: 122 EFATEKILPYKTIYFDIPVEVGLNRIAKH---RDSSKIDRLDVETTAFHKRVHQGYMKLI 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 DR I+D+ + V + +++ ++ Sbjct: 179 GEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208 >gi|313900951|ref|ZP_07834441.1| dTMP kinase [Clostridium sp. HGF2] gi|312954371|gb|EFR36049.1| dTMP kinase [Clostridium sp. HGF2] Length = 210 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 113/216 (52%), Gaps = 6/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLFI+FEG +G+GKTT L L+ Y V TREPGG AE R ++L Sbjct: 1 MNKGLFITFEGNDGSGKTTISKLAYEKLKEMGYPVLYTREPGGIDIAEQIRSIILDPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AA+R H+ + PAL EGKI+LCDRF+DSS YQG + ++ Sbjct: 61 AMDERCEALLYAASRRQHLIEKVLPALKEGKIVLCDRFVDSSLVYQGIARGIGVEEVFAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ +PD T+ L + + GL RV +R D + + + H+ Q + I Sbjct: 121 NQFAIEGHLPDATVFLSVDFETGLSRVTSR------GNKDRLDNESMEFHKLVAQGYELI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +R HIVD+ +V N + + E+++ V Sbjct: 175 KDKFKERMHIVDANPDVDTVLNNTVACLMEIIKNHV 210 >gi|324993714|gb|EGC25633.1| thymidylate kinase [Streptococcus sanguinis SK405] gi|324994973|gb|EGC26886.1| thymidylate kinase [Streptococcus sanguinis SK678] gi|327462985|gb|EGF09306.1| thymidylate kinase [Streptococcus sanguinis SK1] gi|327474588|gb|EGF19993.1| thymidylate kinase [Streptococcus sanguinis SK408] Length = 212 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GKI+L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVTDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ R RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA-RSESREVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|239630116|ref|ZP_04673147.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067265|ref|YP_003789288.1| thymidylate kinase [Lactobacillus casei str. Zhang] gi|239527728|gb|EEQ66729.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439672|gb|ADK19438.1| Thymidylate kinase [Lactobacillus casei str. Zhang] Length = 214 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 4/199 (2%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ + +L+ + Q +H+TREPGG +E R V+L Sbjct: 2 TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL +G I++CDRF+DSS AYQG + + Sbjct: 62 MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P T+ LD+PV +GL R+++ + R+ D +++ + HE+ ++ + Sbjct: 122 QFATAGLEPALTLYLDVPVQMGLDRIKSHQNERQ---YDRLDQESLAFHERVHDAYMTLI 178 Query: 182 RNQPDRCHIVDSAHSFQSV 200 + P R +D+ + V Sbjct: 179 VDNPQRIVSIDATEPLEKV 197 >gi|326772517|ref|ZP_08231801.1| dTMP kinase [Actinomyces viscosus C505] gi|326637149|gb|EGE38051.1| dTMP kinase [Actinomyces viscosus C505] Length = 269 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 110/213 (51%), Gaps = 8/213 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFISFEG +G GKTT I +L L + D +TREPGGT R +LL G Sbjct: 26 GPGLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTELGVEIRRLLLHGG--H 83 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R H+ +RPAL G ++L DR+LDSS AYQG S + L Sbjct: 84 VAPRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLS 143 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++PD T++LD D+ +R R D E++ R+ FL +A Sbjct: 144 LWATEGLLPDLTVLLDGDPDLAERRTTGR------GAKDRLEQEGDAFRVALREQFLTLA 197 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P+R +VD+ VA +++ V V++ Sbjct: 198 EGEPERFVVVDADRPVDQVADDVIEAVVAAVRR 230 >gi|312864169|ref|ZP_07724403.1| dTMP kinase [Streptococcus vestibularis F0396] gi|322517269|ref|ZP_08070148.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124] gi|311100170|gb|EFQ58379.1| dTMP kinase [Streptococcus vestibularis F0396] gi|322124175|gb|EFX95709.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124] Length = 209 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKTT + +LL R + V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTTVLEALLPRLREAYPAKVVTTREPGGVAIAEQIREVILDVNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L EG +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVERVLPELEEGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GL R+ RE LD E+ D +H++ RQ +LD Sbjct: 121 LNAYATDGYKPDVTLLFDVDSETGLARIAANGE-REVNRLD-LEKLD--LHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A+ +P+R I+D++ +F+ V ++ Sbjct: 177 LAQAEPERIKIIDASQAFEDVVEEAWKVI 205 >gi|323490969|ref|ZP_08096163.1| thymidylate kinase [Planococcus donghaensis MPA1U2] gi|323395325|gb|EGA88177.1| thymidylate kinase [Planococcus donghaensis MPA1U2] Length = 216 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 4/214 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG EG+GK+T + +L L K + V TREPGG AE R V+L+ Sbjct: 2 GYLINLEGGEGSGKSTVLKMLAEALTEKGFSVVCTREPGGIDIAEQIREVILNRENTAMD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AAAR H+ I PAL G I+LCDR++DSS AYQG + ++ + Sbjct: 62 ARTEALLYAAARRQHLVEKIIPALETGSIVLCDRYIDSSLAYQGYARGLGMEEIFAINKF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ E MPD T+ D+ +GL R++ + + RE LD + + H K R+ +L + Sbjct: 122 AIDEYMPDLTLYFDVNPKVGLARIE-KDAGREVNRLDV---ESMKFHYKVREGYLLLLSK 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P+R +V++ + V T+ L +++R S Sbjct: 178 NPERIRLVNAENELPIVFTDALETAVRFIEERQS 211 >gi|313201192|ref|YP_004039850.1| thymidylate kinase [Methylovorus sp. MP688] gi|312440508|gb|ADQ84614.1| thymidylate kinase [Methylovorus sp. MP688] Length = 201 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 13/199 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+THI + LQ + +V TREPGGT E R VLL + Sbjct: 3 GKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLHTPM---A 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121 AE E+++ AAR +H+ +I PAL G +L DRF D+S+AYQ G +S+ + L+ Sbjct: 60 AETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLASER--IAQLE 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + Q + PD T++ D+PV++ ++R L + D FER+ + R+ +LD A Sbjct: 118 QWVQQGLQPDLTLLFDVPVEVSVQR------LAAARTPDKFERESADFFRRIRRAYLDRA 171 Query: 182 RNQPDRCHIVDSAHSFQSV 200 + P+R I+DS + V Sbjct: 172 QQFPERFRIIDSNQPLEQV 190 >gi|261364212|ref|ZP_05977095.1| dTMP kinase [Neisseria mucosa ATCC 25996] gi|288567825|gb|EFC89385.1| dTMP kinase [Neisseria mucosa ATCC 25996] Length = 208 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/199 (34%), Positives = 117/199 (58%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T++++++++ + + V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAVIRQWFESHHLPVLFTREPGGTPVGEALREILLNPET-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARQQHLEDVILPALADGVHVVSDRFTDATFAYQGGGRGVPLQDIEMLENWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T++LD+P+++ + R+ RE D FE++ + R ++L+ A P Sbjct: 124 GGFGPDLTLLLDVPLEVSMARIGQ---TREK---DRFEQEQADFFTRVRAVYLERAAAHP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++DS S + V +I Sbjct: 178 ERYALIDSNRSLEEVRADI 196 >gi|189183417|ref|YP_001937202.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda] gi|238692237|sp|B3CR61|KTHY_ORITI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189180188|dbj|BAG39968.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda] Length = 217 Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 111/205 (54%), Gaps = 4/205 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GKTT LL L TRE GGT AE R ++L + Sbjct: 7 GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR +H+E IRP L EGK ++CDRF+DS+ YQ E Q L L+ L Sbjct: 64 ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSENSEEQQLILE-LHRK 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+I+++ I ++R++ R + + L+ F+ ++ H+K F+ +++ Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDSRNQQFHQKITDAFIQVSKL 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++ + V++ ++NI+ Sbjct: 183 FPERIVQINGEPMIEDVSSEVINII 207 >gi|284028576|ref|YP_003378507.1| thymidylate kinase [Kribbella flavida DSM 17836] gi|283807869|gb|ADB29708.1| thymidylate kinase [Kribbella flavida DSM 17836] Length = 661 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/221 (33%), Positives = 121/221 (54%), Gaps = 17/221 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+FEG EGAGK+T +LL ++L+ + V +TREPG T + R ++L + Sbjct: 456 TTGLFIAFEGGEGAGKSTQSALLVKWLEERGQHVLLTREPGATDLGKTLRQIVLDPATGD 515 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA + +HV++VI+PAL G +++ DR++DS+ AYQG ++ + Sbjct: 516 ISHRAEALIYAADKAEHVDSVIKPALKAGTVVITDRYVDSALAYQGSGRDLDLADVERVN 575 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ P+ TI+LDLP GL R + R D E + HE+ R FL++A Sbjct: 576 RWATDDLRPNLTILLDLPPKSGLGRFEER---------DRIEAQSADFHERVRAAFLELA 626 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 +P ++D+ + +A I Q R+ P+ K Sbjct: 627 AAEPQHYLVLDATQDREQLAAQI--------QARLLPMLPK 659 >gi|329766836|ref|ZP_08258365.1| thymidylate kinase [Gemella haemolysans M341] gi|328838562|gb|EGF88168.1| thymidylate kinase [Gemella haemolysans M341] Length = 208 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 120/208 (57%), Gaps = 13/208 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG +G+GKT+ I+ +L RK Y V TREPGGT +E R +L D Sbjct: 3 GKFITVEGSDGSGKTSFINFATEYLTRKGYKVITTREPGGTDFSEKVRELLFDSSND-ID 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 A+ E+++F A+R DH+ I P + EG I++CDRF+DSS AYQ R S+ LD + Sbjct: 62 AKTESLLFCASRRDHIVKKILPHVNEGYIVICDRFVDSSVAYQSYGRGLSKQDILD-INA 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ + V++GL R +NR + + LD++ K+V ++ + D+ Sbjct: 121 YATDNLEPDLTLYFSVDVEVGLARTKNRDDNNRMDQESLDFY--KNV------KRGYDDL 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ +R ++D++ ++++V L+I+ Sbjct: 173 SKENTERIKVIDASDTYENVQKQALSIL 200 >gi|253999090|ref|YP_003051153.1| thymidylate kinase [Methylovorus sp. SIP3-4] gi|253985769|gb|ACT50626.1| thymidylate kinase [Methylovorus sp. SIP3-4] Length = 201 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 11/198 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+THI + LQ + +V TREPGGT E R VLL + Sbjct: 3 GKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLHTPM---A 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 AE E+++ AAR +H+ +I PAL G +L DRF D+S+AYQ G R + + L++ Sbjct: 60 AETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLAAER-IAQLEQ 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 Q + PD T++ D+PV++ ++R L + D FER+ + R+ +LD A+ Sbjct: 119 WVQQGLQPDLTLLFDVPVEVSVQR------LAAARTPDKFERESADFFRRIRRAYLDRAQ 172 Query: 183 NQPDRCHIVDSAHSFQSV 200 P+R I+DS + V Sbjct: 173 QFPERFRIIDSNQPLEQV 190 >gi|309806674|ref|ZP_07700670.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b] gi|308166979|gb|EFO69162.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b] Length = 213 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 117/211 (55%), Gaps = 11/211 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R+++L E Sbjct: 3 GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + L +D +++ Sbjct: 63 NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + + PD T+ D+ GL+R+Q E D E+++ + H+K + Sbjct: 120 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P+R VD+ S V + + I+ E Sbjct: 176 LLSAYPERIKRVDAELSIAEVVSQSVKILEE 206 >gi|259047401|ref|ZP_05737802.1| dTMP kinase [Granulicatella adiacens ATCC 49175] gi|259035592|gb|EEW36847.1| dTMP kinase [Granulicatella adiacens ATCC 49175] Length = 215 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 4/208 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+ EG +GAGKTT I+ L LQ+ D+ TREPGG+ AE R V+L E Sbjct: 3 GLFITMEGPDGAGKTTVINQLIPLLQKHALVDIVSTREPGGSRIAEDIRKVILDVNNTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAI++AA R H+++ I P L +G I+ CDRF+DSS YQG + L Sbjct: 63 DERTEAILYAAGRRQHLKDRILPNLEKGNIVFCDRFVDSSLVYQGVARGIGVEEVAELNR 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T+ LD+P ++GL+R+ + R + D +++ + H R+ +L++ + Sbjct: 123 FATDGLSPSTTLYLDVPAEVGLERI---HKARGNRQFDRLDQEGLSFHTMVREGYLELLK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R +D+ + + V ++ E Sbjct: 180 KYPERMVSIDATQTIEEVVNECFKVLVE 207 >gi|117925167|ref|YP_865784.1| thymidylate kinase [Magnetococcus sp. MC-1] gi|171460782|sp|A0L8T5|KTHY_MAGSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|117608923|gb|ABK44378.1| thymidylate kinase [Magnetococcus sp. MC-1] Length = 210 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 9/212 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I+ L + LQ V TREPGG P +E R +L++ D+ Sbjct: 3 GRFITFEGGEGAGKSTQIAQLTQSLQAHGVKVLCTREPGGCPISERIREILVTGQGDDLD 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +E ++ AAR +H+ VIRPAL G +LCDRF DS+ AYQG +L L + Sbjct: 63 GTSELLLILAARHEHIRQVIRPALASGHWVLCDRFEDSTLAYQGGGRGGDGPWLRQLGQW 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V PD T++LDL +GL R S R FE++ + H++ RQ FL +A+ Sbjct: 123 IRGDVFPDLTLLLDLDPTVGLAR-----SKRRGGQEQRFEQEALSFHQQVRQAFLQMAQQ 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P R +D+ Q VA I W V+ R Sbjct: 178 EPQRMIPIDADQPVQMVAATI----WREVEGR 205 >gi|291278502|ref|YP_003495337.1| dTMP kinase [Deferribacter desulfuricans SSM1] gi|290753204|dbj|BAI79581.1| dTMP kinase [Deferribacter desulfuricans SSM1] Length = 215 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 119/213 (55%), Gaps = 8/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + F+ +GI+G GKTT LLK +L ++ +T+EPGGT R++L+S D Sbjct: 4 IKKSFFLVIDGIDGCGKTTQCKLLKEYLNNIGLNILLTKEPGGTKTGTILRNILISTDYD 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++++A RL+H + +I P L GK ++CDRF+ S+YAYQ + FL L Sbjct: 64 -IEPNTELLLYSADRLEHQKKIIIPGLNSGKTIICDRFISSTYAYQIFARGLEKSFLQYL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD---YFERKDVMIHEKRRQIF 177 ++ +V + PD TII+DLPV+I L+R R L++ C + FE+ + ++K R+ F Sbjct: 123 EQHTVFK-WPDLTIIIDLPVEIALERALKR--LKDQNCENSEGKFEKNGIDFYKKVREGF 179 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 L ++N + +++ S+ I +IV E Sbjct: 180 LWYSKNYKN-VKVINGDRDIDSLFKEIKSIVNE 211 >gi|187923929|ref|YP_001895571.1| thymidylate kinase [Burkholderia phytofirmans PsJN] gi|229470188|sp|B2T436|KTHY_BURPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187715123|gb|ACD16347.1| dTMP kinase [Burkholderia phytofirmans PsJN] Length = 206 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 111/212 (52%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+S + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R R + R+ D FE + V + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFESESVAFFNRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DSA S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIVQIQRKLEELI 203 >gi|226309662|ref|YP_002769556.1| thymidylate kinase [Brevibacillus brevis NBRC 100599] gi|226092610|dbj|BAH41052.1| thymidylate kinase [Brevibacillus brevis NBRC 100599] Length = 213 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 119/212 (56%), Gaps = 10/212 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG EGAGK+T I+ L L+ + DV +TREPGG AE R ++L+ + Sbjct: 7 KKGRFITIEGGEGAGKSTVIAKLYEELKTRGVDVLLTREPGGIDIAEKIREIILNPAHTQ 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL EGK++LCDRF+DSS AYQG ++ L +D++ Sbjct: 67 MDERTEALLYAAARGQHLAEKVLPALAEGKLVLCDRFIDSSLAYQGH---ARGLGIDAVY 123 Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +I +V + MP+ T+ D+ + GL R+ N RE LD + + HE R+ + Sbjct: 124 QINRFAVGDCMPELTLFFDVQPETGLARI-NASRGREVNRLDL---EGMRFHELVREGYQ 179 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P+R ++D+ + V + L + + Sbjct: 180 LVMERDPERFVVIDAEQPMEQVYQSALQALLD 211 >gi|309810854|ref|ZP_07704655.1| dTMP kinase [Dermacoccus sp. Ellin185] gi|308435160|gb|EFP58991.1| dTMP kinase [Dermacoccus sp. Ellin185] Length = 268 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 118/213 (55%), Gaps = 14/213 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEG +GAGKTT I +L+ +V +TREPGGTP R +LL D+ Sbjct: 56 GLFVTFEGGDGAGKTTQIERAAAWLRELGREVVITREPGGTPLGVEIRRLLLHG--DDVA 113 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AEA+++AA R HVE ++RPAL G ++L DR++DSS AYQG + + L D ++ I Sbjct: 114 SRAEALLYAADRAHHVETLVRPALARGAVVLQDRYIDSSIAYQG---AGRALAADDVESI 170 Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S + + PD T+++D+ ++ +R R D ER+ H + R+ FL + Sbjct: 171 SRWATRGLTPDVTVLIDVSPEVARERRGAR------GAEDRLEREADDFHTRVREHFLRL 224 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A R ++D+ S + + + +L++ Sbjct: 225 AARDEARYLVLDAGRSRDDLTAAVRTRLEQLLE 257 >gi|295099397|emb|CBK88486.1| thymidylate kinase [Eubacterium cylindroides T2-87] Length = 210 Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/220 (33%), Positives = 118/220 (53%), Gaps = 18/220 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+F++FEG +G+GKTT + L++ YDV TREPGG+ AE+ R++LL Sbjct: 1 MKQGVFLTFEGNDGSGKTTVCKAICEELKKLGYDVVYTREPGGSKIAESIRNILLDVENT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119 EA+++AA+R H+++ + PAL I+LCDRF+DSS AYQG RD D Sbjct: 61 GMDPRTEALLYAASRRQHLKDRVLPALKNKSIVLCDRFVDSSLAYQGYARDLGMQEVYD- 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLDYFERKDVMIHEKRR 174 + + ++ MP T L + ++ G KR+ +NR L +S H+K R Sbjct: 120 INQFAIDGCMPIKTFFLSVSIETGQKRMDLRGDKNRLDLEQSD-----------FHKKVR 168 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + P+R ++D+ + V N LN V +++ + Sbjct: 169 EGYAKLIEMYPERICVIDAEPELKVVVKNTLNEVMKVIHE 208 >gi|325694989|gb|EGD36893.1| thymidylate kinase [Streptococcus sanguinis SK150] Length = 212 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLAERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NRFATDGLKPDLTLYFDIDVEEGLARIARSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|323697768|ref|ZP_08109680.1| thymidylate kinase [Desulfovibrio sp. ND132] gi|323457700|gb|EGB13565.1| thymidylate kinase [Desulfovibrio desulfuricans ND132] Length = 213 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 3/206 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T I ++ + + + +V +T EPGG+ R +LL E Sbjct: 1 MFITFEGIEGTGKSTQIGRVRDYFEARGREVLLTLEPGGSRIGVELRKMLLHVDNREITP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A R HV VIRPAL GK++LCDRF DS+ YQG L L E++ Sbjct: 61 ITELFLYLADRAQHVGQVIRPALAAGKVVLCDRFADSTIVYQGYGRGLDTSMLRELNEVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDIAR 182 V + PD TI+LD+ +IGLKR R ++ + + FE + + H++ R+ +L A Sbjct: 121 VNGLWPDLTIVLDIDPEIGLKRATLR-NIEDGKAKEEGRFEAEHLSFHKRIREGYLTWAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 R +VD+A + V I ++ Sbjct: 180 LNHRRMSVVDAAGTPDQVFDQIRAVI 205 >gi|229170881|ref|ZP_04298484.1| Thymidylate kinase [Bacillus cereus MM3] gi|228612547|gb|EEK69766.1| Thymidylate kinase [Bacillus cereus MM3] Length = 208 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 NGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ +IGL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEIGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|124267049|ref|YP_001021053.1| thymidylate kinase / thymidylate synthase [Methylibium petroleiphilum PM1] gi|124259824|gb|ABM94818.1| thymidylate kinase / thymidylate synthase [Methylibium petroleiphilum PM1] Length = 215 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 80/213 (37%), Positives = 114/213 (53%), Gaps = 15/213 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FISFEGI+GAGK++H+ + QR+ +V TREPGGTP AE R ++L G+D Sbjct: 10 SGRFISFEGIDGAGKSSHLDAVAERWQRRGLEVVRTREPGGTPLAETLRDLVLHQGMD-- 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++ AAR +H++ I PAL G ++LCDRF D+++AYQG L +L E Sbjct: 68 -ALTEALLIFAARRNHLQQCIAPALERGAVVLCDRFTDATFAYQGAGRGFDLAVLTTL-E 125 Query: 123 ISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 VQ PD T+ DL + +R L + D FER+D + R + Sbjct: 126 SWVQRGPGGLRQPDLTLWFDLDPAVAAQR------LVAARTPDRFERQDEAFFHRVRDGY 179 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 QP+R +D++ S VA I ++ E Sbjct: 180 RARFEAQPERFVRIDASQSRDQVAVQIAAMLAE 212 >gi|206972586|ref|ZP_03233529.1| thymidylate kinase [Bacillus cereus AH1134] gi|228950579|ref|ZP_04112714.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229067795|ref|ZP_04201113.1| Thymidylate kinase [Bacillus cereus F65185] gi|229077306|ref|ZP_04209987.1| Thymidylate kinase [Bacillus cereus Rock4-2] gi|229176631|ref|ZP_04304036.1| Thymidylate kinase [Bacillus cereus 172560W] gi|229188316|ref|ZP_04315365.1| Thymidylate kinase [Bacillus cereus ATCC 10876] gi|206732488|gb|EDZ49667.1| thymidylate kinase [Bacillus cereus AH1134] gi|228595115|gb|EEK52885.1| Thymidylate kinase [Bacillus cereus ATCC 10876] gi|228606798|gb|EEK64214.1| Thymidylate kinase [Bacillus cereus 172560W] gi|228705997|gb|EEL58304.1| Thymidylate kinase [Bacillus cereus Rock4-2] gi|228715279|gb|EEL67137.1| Thymidylate kinase [Bacillus cereus F65185] gi|228809054|gb|EEM55538.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 208 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEKKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|86607432|ref|YP_476195.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab] gi|123504727|sp|Q2JR37|KTHY_SYNJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|86555974|gb|ABD00932.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab] Length = 204 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 110/212 (51%), Gaps = 15/212 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EG GKTT +LL LQR+ Y TREPGGT EA R +LL D Sbjct: 1 MFITLEGGEGVGKTTQQALLAERLQREGYACVSTREPGGTALGEALRELLLHG--DPLTP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++AA R +HV VI PAL G++++CDRF DS+ AYQG + L ++ Sbjct: 59 LAELLLYAADRAEHVNKVIAPALAVGQVVICDRFTDSTLAYQGYGRGLNLEQIRQLNHLA 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P T+ LDL ++GL R S D E++ + H + + F +A + Sbjct: 119 TGGLQPQLTLWLDLAPEVGLAR---------SRLGDKLEQEHLEFHRRVYRGFQALAAAE 169 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 P R +D+ S VA I W +V+ R+ Sbjct: 170 PQRIVRIDAGGSPLEVAARI----WSVVKPRL 197 >gi|325570727|ref|ZP_08146453.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755] gi|325156573|gb|EGC68753.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755] Length = 220 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ I L LQ + TREPGG AE R ++L +E Sbjct: 7 NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G I++CDRF+DSS AYQG + + Sbjct: 67 MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ LD+ D GL+R+Q NR + D + + + H++ R +L + Sbjct: 127 EFATEGTTPDFTLYLDVDSDTGLRRIQENR-----AHQYDRLDSEGLEFHQRVRHAYLKL 181 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A P R H +D+ Q V + + + E Sbjct: 182 AEENPVRIHKIDARMGLQEVVESSYSAIVE 211 >gi|269925799|ref|YP_003322422.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798] gi|269789459|gb|ACZ41600.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798] Length = 216 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 118/213 (55%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG+GKTT +L L+ V +TREPGGT E R +LL + Sbjct: 1 MFITFEGPEGSGKTTQARMLATALETLQCKVVLTREPGGTLVGEEIRKILLGPLGKDLDP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + ++F+AAR V ++I+PA+ GKI++CDR+ DS+ AYQ D ++ ++ Sbjct: 61 KCILLLFSAARAQLVRHIIKPAIDSGKIVICDRYADSTRAYQWGGDGIPRDEVERAIQLG 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD T LDL + GL+R + + + + + +++ H++ R+ +L +A+ Sbjct: 121 TEGLEPDITFYLDLSPEEGLRRRRTDSARGAESGWNSMDARELEFHQRVREAYLSLAKEY 180 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +++D+A + + I+ IV + +Q R+ Sbjct: 181 SSRFYVIDAAGRIEDIHRTIIEIVNKKLQSRIG 213 >gi|257867902|ref|ZP_05647555.1| thymidylate kinase [Enterococcus casseliflavus EC30] gi|257874231|ref|ZP_05653884.1| thymidylate kinase [Enterococcus casseliflavus EC10] gi|257876795|ref|ZP_05656448.1| thymidylate kinase [Enterococcus casseliflavus EC20] gi|257801985|gb|EEV30888.1| thymidylate kinase [Enterococcus casseliflavus EC30] gi|257808395|gb|EEV37217.1| thymidylate kinase [Enterococcus casseliflavus EC10] gi|257810961|gb|EEV39781.1| thymidylate kinase [Enterococcus casseliflavus EC20] Length = 215 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ I L LQ + TREPGG AE R ++L +E Sbjct: 2 NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G I++CDRF+DSS AYQG + + Sbjct: 62 MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ LD+ D GL+R+Q NR + D + + + H++ R +L + Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIQENR-----AHQYDRLDSEGLEFHQRVRHAYLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A P R H +D+ Q V + + + E Sbjct: 177 AEENPVRIHKIDARMGLQEVVESSYSAIVE 206 >gi|119486991|ref|ZP_01620863.1| Thymidylate kinase [Lyngbya sp. PCC 8106] gi|119455920|gb|EAW37054.1| Thymidylate kinase [Lyngbya sp. PCC 8106] Length = 219 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/224 (33%), Positives = 116/224 (51%), Gaps = 11/224 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58 +G I FEG EG GKTT I ++L+ + + T+EPGGT + R++LL Sbjct: 2 NGKLIVFEGSEGGGKTTQIQQTDQWLRDQLGSSVPAIITTKEPGGTALGRSLRNILLDSR 61 Query: 59 VDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++E AE ++FA+ R HVE ++P L +G I+LCDRF DS+ AYQG + Sbjct: 62 LEEPIAPTAELLLFASDRAQHVETFLKPHLKQGAIILCDRFTDSTIAYQGFGRGLDKNLI 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L +I+ + D T+ D+ ++ GL R Q R +D E+ D+ H++ Q F Sbjct: 122 KQLNQIATVGLESDLTLWFDIEIEKGLARTQTR------GEMDRMEKADLAFHQRVNQGF 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 ++A DR +D+ S Q V+T I I+ + + K L S Sbjct: 176 CELADQAGDRMIRIDANLSLQQVSTQIQTILTQYLLKWGFTLQS 219 >gi|114327739|ref|YP_744896.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1] gi|114315913|gb|ABI61973.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1] Length = 250 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 83/218 (38%), Positives = 114/218 (52%), Gaps = 7/218 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG FI+ EG EGAGK+T L L+ VTREPGGT AE R +LL G D Sbjct: 34 SSGRFITLEGGEGAGKSTQTRALAEALESLGIRTLVTREPGGTEGAEQLRSLLLY-GPDW 92 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G AE ++ AAR HV IRPAL +G +LCDR+ DS+ AYQG + + +L Sbjct: 93 DGL-AETLLHFAARAQHVARTIRPALEQGIWVLCDRYYDSTMAYQGYCQGADRQRIAALS 151 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + P+ T++LD PV+ ++R+ R A D +ER E+ R FLDIA Sbjct: 152 --AWLGLDPEVTLVLDAPVEASVQRLATRSGTLTVA--DRYERLGKPFFEQVRAAFLDIA 207 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE-LVQKRVSP 218 + P RC ++D V L + E L R++P Sbjct: 208 ASSPQRCVVLDGIRPPAEVTRMALAALAEKLGDPRLAP 245 >gi|323144741|ref|ZP_08079318.1| dTMP kinase [Succinatimonas hippei YIT 12066] gi|322415492|gb|EFY06249.1| dTMP kinase [Succinatimonas hippei YIT 12066] Length = 205 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 123/211 (58%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 SGLFI+FEG EGAGK+T I ++R+L+ K D REPGGT AE R +L + +E Sbjct: 2 SGLFITFEGTEGAGKSTLIKEIERWLREKEIDFVSVREPGGTVLAEKMRAILKTPSPEEK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++E ++ AAR VE +I+PAL +GK ++CDR S+ AYQG +D+++ Sbjct: 62 LCDKSELLLMYAARAQLVETLIKPALAQGKCVICDRHDLSTVAYQGGGRGLPMDEIDAVR 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ + PD T++LD+ +G++R ++R LD FE + + E+ R+ +LD A Sbjct: 122 NVALGKFRPDLTLLLDIDPKLGMQRARSR------GVLDRFELEQLSFFERVRKAYLDAA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P ++D++ + V ++ + +L+ Sbjct: 176 KRLP-YIKVIDASKNVDEVRLAAISALEDLL 205 >gi|302190918|ref|ZP_07267172.1| thymidylate kinase [Lactobacillus iners AB-1] gi|309808247|ref|ZP_07702156.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a] gi|309810090|ref|ZP_07703936.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D] gi|312873623|ref|ZP_07733670.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d] gi|312875715|ref|ZP_07735710.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b] gi|325911589|ref|ZP_08173997.1| dTMP kinase [Lactobacillus iners UPII 143-D] gi|308168535|gb|EFO70644.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a] gi|308169589|gb|EFO71636.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D] gi|311088707|gb|EFQ47156.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b] gi|311090876|gb|EFQ49273.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d] gi|325476575|gb|EGC79733.1| dTMP kinase [Lactobacillus iners UPII 143-D] Length = 213 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 11/211 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 3 GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + L +D +++ Sbjct: 63 NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 119 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + + PD T+ D+ GL+R+Q E D E+++ + H+K + Sbjct: 120 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P+R VD+ S V + + I+ E Sbjct: 176 LLSAYPERIKRVDAELSIAEVVSQSVKILEE 206 >gi|15612605|ref|NP_240908.1| thymidylate kinase [Bacillus halodurans C-125] gi|14285517|sp|Q9KGL9|KTHY_BACHD RecName: Full=Thymidylate kinase gi|10172654|dbj|BAB03761.1| thymidylate kinase [Bacillus halodurans C-125] Length = 210 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKT+ + ++ L+ V TREPGG P AE R ++L Sbjct: 1 MTKGCFITVEGGEGAGKTSALDAIEEMLRENGLSVVRTREPGGIPIAEQIRSIILDVDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H+ + PAL G ++LCDRF+DSS AYQG + ++ Sbjct: 61 RMDPRTEALLYAAARRQHLVEKVLPALEAGHVVLCDRFIDSSLAYQGYARGIGFEDILAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ PD T++ + D+GL R+ S RE LD ++ + H+K ++ + I Sbjct: 121 NEFAIEGRYPDLTLLFRVDPDVGLSRIHRDQS-REQNRLD---QEALTFHQKVKEGYERI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R +D+ SF V + + ++ + Sbjct: 177 VETYPERVVEIDANQSFDQVVADAVRMIKQ 206 >gi|119384876|ref|YP_915932.1| dTMP kinase [Paracoccus denitrificans PD1222] gi|119374643|gb|ABL70236.1| thymidylate kinase [Paracoccus denitrificans PD1222] Length = 199 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 8/193 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63 +FISFEGI+G+GK+T L + L + +V +TREPGG+ AE R +L+ CG + + Sbjct: 1 MFISFEGIDGSGKSTQARRLVQALTAQGTEVLLTREPGGSEGAEEIRRLLVEGCG-ERWS 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++F AAR DHVE +I+PAL G ++ DRF DSS YQG + ++ L + Sbjct: 60 PETELLLFTAARRDHVERLIQPALARGAWVVTDRFADSSRVYQGLARAELRQLVEELHRL 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T I+D+ + L R Q R + D FE + K R+ FL +A Sbjct: 120 TIG-IEPDRTFIIDIDPAVALARGQARGGVE-----DRFETLGLGFQRKLREGFLALAAE 173 Query: 184 QPDRCHIVDSAHS 196 P R ++D S Sbjct: 174 APGRIRVIDGNGS 186 >gi|14591458|ref|NP_143538.1| thymidylate kinase [Pyrococcus horikoshii OT3] gi|6016461|sp|O59366|KTHY_PYRHO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|3258125|dbj|BAA30808.1| 205aa long hypothetical thymidylate kinase [Pyrococcus horikoshii OT3] Length = 205 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 15/208 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G FI EGI+G+GKTT LL + + K Y+V +T+EP + + R ++L V Sbjct: 3 GYFIVLEGIDGSGKTTQAKLLAEWFEDKGYEVLLTKEPTDSELGKLIRRIILEESVIDGS 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EAEA++FAA R +HV+ +I PAL EGK+++CDR+ SS AYQ R L L+ L Sbjct: 63 KISYEAEALLFAADRAEHVKKIILPALSEGKVVICDRYFYSSLAYQWARG----LDLNWL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ PD I+LDLPV L+R++ R +L E F+ K V + K R +L + Sbjct: 119 IQVNSFAPRPDLAILLDLPVKESLRRIKLRGTLTE------FD-KIVELQRKVRHNYLKL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P+ IV++ S + + ++I+ +V Sbjct: 172 AEMFPE-MRIVNALSSIEDIHSDIVALV 198 >gi|319936704|ref|ZP_08011117.1| thymidylate kinase [Coprobacillus sp. 29_1] gi|319808261|gb|EFW04826.1| thymidylate kinase [Coprobacillus sp. 29_1] Length = 207 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 126/213 (59%), Gaps = 10/213 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG+GKTT +++K L ++ Y V +TREPGG AE R ++ Sbjct: 2 SGKFITFEGGEGSGKTTIAAMVKEVLDKEGYRVTLTREPGGVEIAEKIRDIIHDVKYTNM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AA+R H+ + PAL +G+I++CDRF+DSS YQG ++ + +D + Sbjct: 62 DRKTEALLYAASRRQHLVEKVIPALEKGEIVICDRFVDSSMVYQG---LARGIGIDEVYN 118 Query: 123 ISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +++ + ++P+ T+ D+ ++GL+RV Y+ +E ++ + +++ HE+ + +L Sbjct: 119 MNLFATENILPNRTVFFDIKPEVGLQRV---YANKERE-VNRLDLENIDFHERVYEGYLT 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I P+R VD++ + V +L + E++ Sbjct: 175 ICNRFPERIVKVDASQDIEDVLFQVLEKIREIL 207 >gi|259502695|ref|ZP_05745597.1| dTMP kinase [Lactobacillus antri DSM 16041] gi|259169340|gb|EEW53835.1| dTMP kinase [Lactobacillus antri DSM 16041] Length = 218 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 6/207 (2%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ + ++ KR + + D V TREPGG +E R VL S + Sbjct: 7 GKFISFEGPDGAGKTSVLRAIQKRLVDQLGADRVMYTREPGGNHISEQIRRVLFSPENTD 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDR++DSS AYQG + + Sbjct: 67 MDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRQLGEEAIWQMN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ ++PD TI LD+ +GL+R+ + ++ + + + H+ R +L + Sbjct: 127 QFAIDGLLPDLTIYLDVESAVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRLY 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 R PDR ++D++ V ++ + Sbjct: 183 RAHPDRIKLIDASQPLDQVIADVAQTI 209 >gi|268315735|ref|YP_003289454.1| thymidylate kinase [Rhodothermus marinus DSM 4252] gi|262333269|gb|ACY47066.1| thymidylate kinase [Rhodothermus marinus DSM 4252] Length = 220 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 12/219 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ISFEGI+G GK+T LL + L+ Y + REPGGT +E R +LL +D Sbjct: 1 MLISFEGIDGCGKSTQARLLAQRLETAGYRTLLVREPGGTELSERIRGLLLDPALD-IDP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEI 123 AE ++F+AAR V IRPAL G I+LCDRF DS+ AYQ G R + +L Sbjct: 60 FAELLLFSAARRQLVVERIRPALQAGYIVLCDRFYDSTTAYQGGGRGVVELAWLRDFNRR 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++PD T LD+P+++ L R ++ D ER D E+ R + +A Sbjct: 120 VTDGLVPDRTYWLDVPLEVALARRD------QAGDPDRMERADPAFFERVRATYAQLATE 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 +PDR +D+ S +++ I W VQ+ + P ++ Sbjct: 174 EPDRILRLDATASIETLHETI----WNDVQRLLPPTGTR 208 >gi|254386206|ref|ZP_05001517.1| thymidylate kinase [Streptomyces sp. Mg1] gi|194345062|gb|EDX26028.1| thymidylate kinase [Streptomyces sp. Mg1] Length = 852 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 110/201 (54%), Gaps = 8/201 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 515 DAGFFIALEGGDGAGKSTQVQALADWIRGKGHEVVVTREPGATPVGKRLRSILLDVSSAG 574 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 575 LSNRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 634 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LD+ + +R + D E + H++ R FL +A Sbjct: 635 RWATGGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRAGFLTLA 686 Query: 182 RNQPDRCHIVDSAHSFQSVAT 202 P R +VD+ +SV+T Sbjct: 687 AADPGRYLVVDAGQDPESVST 707 >gi|260913250|ref|ZP_05919732.1| dTMP kinase [Pasteurella dagmatis ATCC 43325] gi|260632837|gb|EEX51006.1| dTMP kinase [Pasteurella dagmatis ATCC 43325] Length = 215 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 116/209 (55%), Gaps = 8/209 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EGIEGAGKTT + R L D+ TREPGGTP AE RH++ Sbjct: 5 MKTGKFIVLEGIEGAGKTTARDSIVRALNAYGIQDIVFTREPGGTPLAEKLRHLIKHETE 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +AE ++ AAR+ VENVI+PAL EGK ++ DR SS AYQG L + Sbjct: 65 EPVTDKAELLMLYAARIQLVENVIKPALAEGKWVIGDRHDMSSQAYQGGGRQLDKTLLLT 124 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+E + + PD T+ LD+ +GL R + R LD E++++ ++ RQ +L+ Sbjct: 125 LKETVLGDFEPDLTLYLDIDPVLGLTRARGR------GALDRIEQQNIDFFQRTRQRYLE 178 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ P C +D++H V+ ++ + V Sbjct: 179 LVQDNPKAC-CIDASHEIDKVSADVQSAV 206 >gi|240142285|ref|YP_002966795.1| thymidylate kinase [Methylobacterium extorquens AM1] gi|240012229|gb|ACS43454.1| thymidylate kinase [Methylobacterium extorquens AM1] Length = 225 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/190 (38%), Positives = 106/190 (55%), Gaps = 6/190 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F S EG EGAGK++ I+ L ++ +V VTREPGG AE R+++LS G ++ Sbjct: 11 GVFASLEGPEGAGKSSQINRLAERMRAAGREVVVTREPGGCKGAEVLRNLVLS-GAVQWD 69 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++FAAAR +HV I PAL G ++L DRF +SS AYQG D L+ I Sbjct: 70 PRTELMLFAAARREHVVRTIAPALARGAVVLSDRFSESSRAYQGAARGVGTALCDDLERI 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD +LD+ +GL R + R + +S FE D+ H RQ FLD A Sbjct: 130 ACDGILPDVVFLLDVDPVVGLARSKARAT--DST---MFEALDLEFHRTLRQAFLDRAAE 184 Query: 184 QPDRCHIVDS 193 +P+ ++ S Sbjct: 185 RPELFEVIPS 194 >gi|312868193|ref|ZP_07728393.1| dTMP kinase [Streptococcus parasanguinis F0405] gi|311095938|gb|EFQ54182.1| dTMP kinase [Streptococcus parasanguinis F0405] Length = 212 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G ISFEG EGAGK++ + + L+ K TREPGG AE R V+L Sbjct: 1 MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL GK++L DRF+DSS AYQG ++ L Sbjct: 61 SMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE-REVNRLDL---EGLELHQKVRQGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D++ SF++V ++L ++ Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVL 204 >gi|85057772|ref|YP_456688.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|123518128|sp|Q2NIY4|KTHY_AYWBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|84789877|gb|ABC65609.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 207 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 123/210 (58%), Gaps = 7/210 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKTTH S L L +K Y +T+EPGG E R++LL + Sbjct: 1 MFISFEGCEGTGKTTHSSYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSYNKQIDF 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA R +H+ +I PAL + KI++CDR+LDS+ AYQ F+ ++ ++ Sbjct: 60 HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSKDFVLNINNLA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-ARN 183 + MP+ T LDL IG++RV+ ++ +E ++ F+ + + H+K R+ +LD+ ++ Sbjct: 120 L-NYMPNITFYLDLDPKIGIQRVK-QFRPKE---INSFDLQKLSFHKKVRKGYLDLYQKD 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 Q R ++D++ S + + I + E+ Q Sbjct: 175 QQKRIFLIDASKSLEKIYNIIEQKLKEVFQ 204 >gi|317126771|ref|YP_004093053.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522] gi|315471719|gb|ADU28322.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522] Length = 213 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 78/216 (36%), Positives = 124/216 (57%), Gaps = 10/216 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+FEG EGAGKTT + +K L+ + V +TREPGG+ AE R V+L+ E Sbjct: 2 SGVFITFEGGEGAGKTTVLKEIKDRLEASDEKVVMTREPGGSIIAEKIRDVILNPDHTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + P L +G I+LCDRF+DSS YQG ++ + ++ + Sbjct: 62 DARTEALLYAAARRQHLVEKVFPYLDKGYIVLCDRFIDSSLVYQG---VARKIGIEEVLN 118 Query: 123 ISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I++ MP T+ D+ IGL+R+ ++ RE LD R+ + H R+ + + Sbjct: 119 INLFATGGFMPSKTLFFDIDPKIGLERIA-KHGNREFNRLD---REALDFHYIVRKAYHE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +PDR +VD++ S V V+++VQ + Sbjct: 175 LQGREPDRIEMVDASLSLTEVIEAAWTKVFDIVQAK 210 >gi|240950250|ref|ZP_04754530.1| thymidylate kinase [Actinobacillus minor NM305] gi|257465436|ref|ZP_05629807.1| thymidylate kinase [Actinobacillus minor 202] gi|240295251|gb|EER46050.1| thymidylate kinase [Actinobacillus minor NM305] gi|257451096|gb|EEV25139.1| thymidylate kinase [Actinobacillus minor 202] Length = 209 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 115/208 (55%), Gaps = 12/208 (5%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGKTT H ++L + + + TREPGGTP AE RH++ + Sbjct: 3 GKFIVLEGLEGAGKTTAHQAILAQLEAAGIHHIVQTREPGGTPLAEKLRHLIKHDLEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQG L++L++ Sbjct: 63 NDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQLDRQLLETLKQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI LD+ IGL+R + R L E LD+F R RQ +L++ Sbjct: 123 TILGDFEPDLTIYLDIDPAIGLERARGRGELDRIEQQSLDFFYRT--------RQRYLEL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +N D+ I+++ + VA +I V Sbjct: 175 TQNN-DKAVIINAEQPIEKVAADIQQAV 201 >gi|73541128|ref|YP_295648.1| thymidylate kinase [Ralstonia eutropha JMP134] gi|123625155|sp|Q471X9|KTHY_RALEJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72118541|gb|AAZ60804.1| thymidylate kinase [Ralstonia eutropha JMP134] Length = 203 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 114/207 (55%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEGI+GAGK+THI ++ R +RK+ V TREPGGTP E R +LL + Sbjct: 3 GKFITFEGIDGAGKSTHIGAVAARLRERKDIPAVVTTREPGGTPLGEDLRQILLH---RK 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG L++L+ Sbjct: 60 MHLETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQGGGRGLATSRLETLE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T++ D+P++ +R+ RE D FE + E+ R +L A Sbjct: 120 TWVQDGLQPDLTLLFDVPLETASERLAG---AREP---DKFEAESRAFFERTRAEYLRRA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++D+ S +++ + I+ Sbjct: 174 AQAPERFRVIDATQSIEAIRVELEKII 200 >gi|71064726|ref|YP_263453.1| thymidylate kinase [Psychrobacter arcticus 273-4] gi|71037711|gb|AAZ18019.1| thymidylate kinase [Psychrobacter arcticus 273-4] Length = 225 Score = 122 bits (307), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 80/216 (37%), Positives = 114/216 (52%), Gaps = 16/216 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEG EG GKTT I L LQ D TREPGG+P AE R +LL Sbjct: 19 GHFISFEGTEGVGKTTAIEQLCARLQANGIDYLRTREPGGSPFAERLREILLDPNT-AIN 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLDS 119 + E ++ AAR DH++ VI PAL G ++CDRF DS+ AYQG + D++ +D+ Sbjct: 78 DDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDATVRGKIDT 137 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E V + +P+ T+ LDLPV G+ R R + D FE++ + + F Sbjct: 138 LIEQFVTQ-LPELTLWLDLPVLEGMARANKR------SAADRFEQQATDFFTRVHKGFRT 190 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A P R +D++ S V+ I W+ V+++ Sbjct: 191 LADEYPKRIQRIDASGSADEVSARI----WQKVEEK 222 >gi|296876048|ref|ZP_06900104.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912] gi|296432959|gb|EFH18750.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912] Length = 212 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G ISFEG EGAGK++ + + L+ K TREPGG AE R V+L Sbjct: 1 MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL GK++L DRF+DSS AYQG ++ L Sbjct: 61 RMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE-REVNRLDL---EGLELHQKVRQGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D++ SF++V ++L ++ Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVL 204 >gi|75762825|ref|ZP_00742646.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218895166|ref|YP_002443577.1| thymidylate kinase [Bacillus cereus G9842] gi|228898784|ref|ZP_04063067.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] gi|228956472|ref|ZP_04118269.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228963128|ref|ZP_04124298.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|229039935|ref|ZP_04189700.1| Thymidylate kinase [Bacillus cereus AH676] gi|229148440|ref|ZP_04276697.1| Thymidylate kinase [Bacillus cereus m1550] gi|226732651|sp|B7ISU0|KTHY_BACC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|74489692|gb|EAO53087.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218540819|gb|ACK93213.1| thymidylate kinase [Bacillus cereus G9842] gi|228634982|gb|EEK91554.1| Thymidylate kinase [Bacillus cereus m1550] gi|228727394|gb|EEL78586.1| Thymidylate kinase [Bacillus cereus AH676] gi|228796513|gb|EEM43951.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228803162|gb|EEM49983.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228860809|gb|EEN05186.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] Length = 208 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|327470490|gb|EGF15946.1| thymidylate kinase [Streptococcus sanguinis SK330] Length = 212 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLAEQVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ R RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA-RSESREVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|163856816|ref|YP_001631114.1| thymidylate kinase [Bordetella petrii DSM 12804] gi|229487582|sp|A9INL0|KTHY_BORPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|163260544|emb|CAP42846.1| tmk [Bordetella petrii] Length = 207 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 15/204 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+TH + L L+ V TREPGGTP E R ++LS + Sbjct: 5 GRFITLEGVDGAGKSTHAAWLADALRDMGRTVVATREPGGTPLGETLRGLVLS---ESMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120 + E ++ AAR +H+ VI PAL G ++CDR+ D++YAYQG + L D L Sbjct: 62 LDTETLLMFAARCEHLTQVIEPALARGDWVVCDRYTDATYAYQG---GGRQLGADRIAVL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T + D+P+++ R L ++ D FER++ E+ R +L Sbjct: 119 EQWMRPALQPDRTWLFDVPLELA------RARLADARLPDRFEREEAAFFERTRAAYLAR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A+ P R IVDS+ V + Sbjct: 173 AQAHPGRIRIVDSSRPVTEVRAQL 196 >gi|322386922|ref|ZP_08060546.1| thymidylate kinase [Streptococcus cristatus ATCC 51100] gi|321269204|gb|EFX52140.1| thymidylate kinase [Streptococcus cristatus ATCC 51100] Length = 212 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FIS EG EGAGKT+ + L L+ Y++ TREPGG +E R V+L G Sbjct: 1 MKKGVFISLEGPEGAGKTSVLEALLPQLKEMGYELLTTREPGGVAISEKIREVILDKGHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+AE +++ A+R H+ + PAL +G +L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKAELLLYIASRRQHLAEKVLPALEQGTWVLQDRFIDSSVAYQGYGRGLAVDDVEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V GL R+ R RE LD + + +HE+ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVKEGLARI-ARNKEREVNRLDL---EGLDLHERVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P R +D++ + V + L ++ E Sbjct: 177 LEKEPGRVVKIDASQPLEQVVADSLAVIKE 206 >gi|323526017|ref|YP_004228170.1| thymidylate kinase [Burkholderia sp. CCGE1001] gi|323383019|gb|ADX55110.1| thymidylate kinase [Burkholderia sp. CCGE1001] Length = 206 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R R + R+ D FE + E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DS+ S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIARIQKQLEELI 203 >gi|327462078|gb|EGF08407.1| thymidylate kinase [Streptococcus sanguinis SK1057] gi|328946592|gb|EGG40730.1| thymidylate kinase [Streptococcus sanguinis SK1087] Length = 212 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLAERVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ R RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA-RSESREVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|297622813|ref|YP_003704247.1| thymidylate kinase [Truepera radiovictrix DSM 17093] gi|297163993|gb|ADI13704.1| thymidylate kinase [Truepera radiovictrix DSM 17093] Length = 217 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 112/214 (52%), Gaps = 8/214 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG EG+GKTT + L L+ T+EPGGT E R ++L + Sbjct: 7 TRGVFIAFEGPEGSGKTTQLGRLAARLEALGQVPLTTKEPGGTAVGERLRALVLDPAL-R 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +++AA+R + V +V++PAL G+++LCDRF ++ AYQGE ++ L Sbjct: 66 MHPETELLLYAASRAELVASVLKPALAAGRVVLCDRFTGATVAYQGEGRGLPKDWIGVLN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + P T++ DLP ++GL RV R D E+ HE+ R+ FL A Sbjct: 126 ARVTGGLKPHLTLLFDLPPEVGLARVARR------GARDRLEQAAFAFHERVRRGFLQQA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P H++D++ + VA + +V L++ R Sbjct: 180 EQDPS-WHVLDASRPEEEVAGAVWRLVAPLLRDR 212 >gi|148284569|ref|YP_001248659.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong] gi|166221759|sp|A5CDS9|KTHY_ORITB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146740008|emb|CAM80084.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong] Length = 217 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 4/205 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GKTT LL L TRE GGT AE R ++L + Sbjct: 7 GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR +H+E IRP L EGK ++CDRF+DS+ YQ + Q L L+ L Sbjct: 64 ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSKNSEEQQLILE-LHRK 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+I+++ I ++R++ R + + L+ F+ ++ H+K F+ +++ Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDNRNQQFHQKITDAFIQVSKL 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++ + V++ ++NI+ Sbjct: 183 FPERIVQINGEPMIEDVSSEVINII 207 >gi|218231073|ref|YP_002364880.1| thymidylate kinase [Bacillus cereus B4264] gi|226732652|sp|B7HIJ8|KTHY_BACC4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218159030|gb|ACK59022.1| dTMP kinase [Bacillus cereus B4264] Length = 208 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEKYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|238897674|ref|YP_002923353.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259494273|sp|C4K3R2|KTHY_HAMD5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229465431|gb|ACQ67205.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 210 Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 11/215 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 G FI EG+EGAGK+T ++ +++FL+ K DV TREPGGT +E RH++ +E Sbjct: 3 GKFIVIEGLEGAGKSTAVNTVQQFLRHFKIQDVICTREPGGTALSEEIRHLIKKKSQNEE 62 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +AE ++ AAR+ +EN+I+PAL G ++ DR SS AYQG + F+ SL Sbjct: 63 ILTDKAELLLLYAARVQLLENIIKPALSSGTWVIGDRHDLSSQAYQGGGRGIKSEFIKSL 122 Query: 121 QEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + ++ PD T+ LDLP ++GL+R + R LD E++ ++ E+ R +L+ Sbjct: 123 ADFTLGSSFRPDLTLYLDLPPELGLQRARKR------GHLDRIEQQSLVFFERIRARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + P R ++D++ + V +I N + L++K Sbjct: 177 LTYDDP-RIKMIDASKPIKKVTVDIQNALLSLLEK 210 >gi|256827903|ref|YP_003156631.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028] gi|256577079|gb|ACU88215.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028] Length = 211 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 1/202 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEG+EG GK+T L R+ +DV T EPGG+ + R +LL + + Sbjct: 1 MFLTFEGMEGCGKSTQCKKLIEHFVRQGHDVLHTLEPGGSRLGKELRRILLDPKNSDLSS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++ A R HV +VIRPA+ +G+ ++CDRF DS+ YQG L L +++ Sbjct: 61 TSELFLYLADRAQHVSSVIRPAMEDGRTVICDRFADSTVVYQGYGRGLDPSLLHHLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 VQ + PD TI+LD+ +IGL+R R ++A FE + + H + R+ +L A Sbjct: 121 VQGLWPDMTILLDVEPEIGLRRALTRNMQDNKTATEGRFEAESMAFHTRIREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 R +VD+ + +V +IL Sbjct: 181 HRGRFLVVDAGRNPDAVFDSIL 202 >gi|227513699|ref|ZP_03943748.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577] gi|227522511|ref|ZP_03952560.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290] gi|227083018|gb|EEI18330.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577] gi|227090333|gb|EEI25645.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290] Length = 216 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 66/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ ++ +F ++ + VTREPGG +E R V+L E Sbjct: 2 TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL K++LCDR++DSS AYQG + + Sbjct: 62 MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++++P TI ++PV++GL R+ R+S+ +D + + H++ Q ++ + Sbjct: 122 EFATEKILPYKTIYFEIPVEVGLNRIAKH---RDSSKIDRLDVETTAFHKRVHQGYMKLI 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 DR I+D+ + V + +++ ++ Sbjct: 179 DEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208 >gi|30018302|ref|NP_829933.1| thymidylate kinase [Bacillus cereus ATCC 14579] gi|229125548|ref|ZP_04254581.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4] gi|229142836|ref|ZP_04271279.1| Thymidylate kinase [Bacillus cereus BDRD-ST24] gi|296500863|ref|YP_003662563.1| thymidylate kinase [Bacillus thuringiensis BMB171] gi|46576501|sp|Q81JB5|KTHY_BACCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|29893842|gb|AAP07134.1| Thymidylate kinase [Bacillus cereus ATCC 14579] gi|228640599|gb|EEK96986.1| Thymidylate kinase [Bacillus cereus BDRD-ST24] gi|228657865|gb|EEL13670.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4] gi|296321915|gb|ADH04843.1| thymidylate kinase [Bacillus thuringiensis BMB171] Length = 208 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKIFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|103486743|ref|YP_616304.1| thymidylate kinase [Sphingopyxis alaskensis RB2256] gi|98976820|gb|ABF52971.1| thymidylate kinase [Sphingopyxis alaskensis RB2256] Length = 207 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 6/193 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T + L L ++ +V TREPGG+ AEA R +L+ D Sbjct: 1 MIRGRFITLEGGEGVGKSTQLRALSEALAARSIEVVATREPGGSVGAEAIRTLLMEGSDD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +EA++FAAAR DHV IRPAL G +LCDRF+DSS AYQG + +L Sbjct: 61 RWDARSEALLFAAARADHVARTIRPALARGAWVLCDRFVDSSRAYQGGGGGITDADILAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++PD T +L + D +R+ R D K + F ++ Sbjct: 121 HRFGSRGLLPDRTFLLTVRPDEAARRLAARGD------RDRMGSKPADYQARLAARFAEM 174 Query: 181 ARNQPDRCHIVDS 193 A +P R ++D+ Sbjct: 175 AATEPQRWRLIDA 187 >gi|259501361|ref|ZP_05744263.1| dTMP kinase [Lactobacillus iners DSM 13335] gi|315653112|ref|ZP_07906037.1| thymidylate kinase [Lactobacillus iners ATCC 55195] gi|259167214|gb|EEW51709.1| dTMP kinase [Lactobacillus iners DSM 13335] gi|315489477|gb|EFU79114.1| thymidylate kinase [Lactobacillus iners ATCC 55195] Length = 234 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 24 GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 83 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + L +D +++ Sbjct: 84 NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 140 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + + PD T+ D+ GL+R+Q E D E+++ + H+K + Sbjct: 141 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 196 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R VD+ S V + + I+ E + Sbjct: 197 LLSAYPERIKRVDAELSIAEVVSQSVKILEEYM 229 >gi|332157932|ref|YP_004423211.1| thymidylate kinase [Pyrococcus sp. NA2] gi|331033395|gb|AEC51207.1| thymidylate kinase [Pyrococcus sp. NA2] Length = 205 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 116/211 (54%), Gaps = 19/211 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--- 59 G FI FEGI+G+GKTT LL ++ + Y+V +T+EP T + R ++L + Sbjct: 2 KGYFIVFEGIDGSGKTTQAKLLAKWFRDNGYEVLLTKEPTDTEFGKLIRKLVLEGSIIDG 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EAEA++FAA R +HV+ +I PAL EGKI++CDR+L SS AYQ R LD Sbjct: 62 SRISYEAEALLFAADRAEHVKKIILPALREGKIVICDRYLYSSLAYQWARG------LDL 115 Query: 120 LQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 I V P D I+LDLP+ L+R++ R E F+ K V + K R+ + Sbjct: 116 EWLIKVNSFAPRADLVILLDLPITKSLERIRGRVIKTE------FD-KLVELQRKVRENY 168 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L +A P+ +VD+ + + V N++ +V Sbjct: 169 LKLAEMFPE-IRVVDAMANIEDVHNNVVTLV 198 >gi|302535280|ref|ZP_07287622.1| integral membrane protein with kinase activity [Streptomyces sp. C] gi|302444175|gb|EFL15991.1| integral membrane protein with kinase activity [Streptomyces sp. C] Length = 1094 Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 117/218 (53%), Gaps = 13/218 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 515 TGFFIALEGGDGAGKSTQVQALAEWIRGKGHEVVVTREPGATPVGKRLRSILLDISSAGL 574 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++++RPAL G +++ DR++DSS AYQG + + Sbjct: 575 SNRAEALLYAADRAEHVDSLVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARISR 634 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LD+ + +R + D E + H++ R FL +A Sbjct: 635 WATGGLVPNLTVLLDVSPETARERF--------TEAPDRLESEPTEFHQRVRAGFLTLAA 686 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 P R +VD+ SV T +L+ + R+ PLS Sbjct: 687 ADPGRYLVVDAGQDPGSVTTVVLHRL-----DRMLPLS 719 >gi|169824826|ref|YP_001692437.1| thymidylate kinase [Finegoldia magna ATCC 29328] gi|238687760|sp|B0S2F7|KTHY_FINM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|167831631|dbj|BAG08547.1| thymidylate kinase [Finegoldia magna ATCC 29328] Length = 203 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 112/204 (54%), Gaps = 7/204 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GK+T I + +L NYDV TREPGG+P AE R+++L + G Sbjct: 1 MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I PAL E KI+LCDRFL SS AYQG + ++ E + Sbjct: 61 RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V PD + D+ LKR + SL + D E++ HE+ + +I N Sbjct: 121 INGVFPDFVLFFDVDPITTLKR---KSSLDTA---DRLEKEGNNFHERVYNGYKEIL-NS 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 I+D+ S + V + + ++ Sbjct: 174 EKNIEIIDATQSVEDVFSQCIEVL 197 >gi|12722080|gb|AAK03757.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 243 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EGIEGAGKTT + R L +D+ TREPGGTP AE R ++ Sbjct: 35 MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 94 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQ G R QHL L Sbjct: 95 EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHL-LH 153 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + E PD T+ LD+ +GL R + R LD E++++ + RQ + Sbjct: 154 TLKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQ 207 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++ R+ P + +D++ + VA ++ Sbjct: 208 ELVRHNP-KAVTIDASQTMSKVAEDV 232 >gi|163839161|ref|YP_001623566.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209] gi|162952637|gb|ABY22152.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209] Length = 221 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 81/210 (38%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG +GAGK+T LL L+ V +TREPGGTP E R ++L G + Sbjct: 19 SGFFIAFEGGDGAGKSTQARLLAAALKDLGRQVVLTREPGGTPVGEKLRSLVLDHGQGQI 78 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++FAAAR H E VIRPAL EGK+++ DR++DSS AYQG + + E Sbjct: 79 DARTEALLFAAARAAHAEQVIRPALAEGKVVITDRYIDSSIAYQGAGRDLGEDEVRKVNE 138 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ TI+LD+ + G R R A D E + H++ RQ FL++A Sbjct: 139 WATAGLLPELTILLDVAANEGRNR-------RAGARPDRLESEPDNFHDRIRQAFLNLAS 191 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P + I+++ S + IL EL+ Sbjct: 192 ARPKQYLILNARLSIDELQQAILQRAKELL 221 >gi|309805418|ref|ZP_07699465.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c] gi|312872145|ref|ZP_07732218.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1] gi|329921009|ref|ZP_08277537.1| dTMP kinase [Lactobacillus iners SPIN 1401G] gi|308165236|gb|EFO67472.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c] gi|311092229|gb|EFQ50600.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1] gi|328935285|gb|EGG31765.1| dTMP kinase [Lactobacillus iners SPIN 1401G] Length = 229 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 11/213 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 19 GYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKEM 78 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + L +D +++ Sbjct: 79 NAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQG---IGRDLGIDEIKQ 135 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + + PD T+ D+ GL+R+Q E D E+++ + H+K + Sbjct: 136 INEFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQ 191 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R VD+ S V + + I+ E + Sbjct: 192 LLSAYPERIKRVDAELSIAEVVSQSVKILEEYM 224 >gi|261377929|ref|ZP_05982502.1| dTMP kinase [Neisseria cinerea ATCC 14685] gi|269145789|gb|EEZ72207.1| dTMP kinase [Neisseria cinerea ATCC 14685] Length = 206 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKSTNLAAIKAWFERRRLPVLFTREPGGTALGEALREILLNPAT-KAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ A+R+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFASRMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ RE D FE++ + R ++L+ A P Sbjct: 124 GSLKPDLTLLLDVPLEVSMARIGQ---AREK---DRFEQEQADFFMRVRGVYLNRATACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++D S + V +I ++ Sbjct: 178 ERYAVIDGNRSVEEVRNSIEKVL 200 >gi|319939588|ref|ZP_08013947.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV] gi|319811177|gb|EFW07483.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV] Length = 212 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G+FIS EG +GAGK++ + L L+ K TREPGG AE R V+L Sbjct: 1 MSKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ I PAL G+++L DRF+DSS AYQG + +D L Sbjct: 61 EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ +E D +R+ V H++ R+ +L I Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAKS---KERGA-DRLDRESVEWHQRVREGYLSI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +P+R +D++ + V + L ++ E V+ Sbjct: 177 LKKEPNRVRKIDASQPLEKVVADTLAVLAEHVE 209 >gi|119025180|ref|YP_909025.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703] gi|154486549|ref|ZP_02027956.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis L2-32] gi|166221721|sp|A0ZZR0|KTHY_BIFAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118764764|dbj|BAF38943.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703] gi|154084412|gb|EDN83457.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis L2-32] Length = 217 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 17/209 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G FISFEG++G GKTT + L+ +++ + + VTREPGGT A R +LL GVD Sbjct: 3 GTFISFEGVDGVGKTTQVERLRAYVESQGRECVVTREPGGTALGVAIRKMLLH-GVDTGD 61 Query: 61 -----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + EA++FAA R HV VI PAL G +++ DR+LDSS AYQ Sbjct: 62 ENDCADIAPRTEALLFAADRAQHVAEVILPALQRGAVVITDRYLDSSLAYQAGGRELTAA 121 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + +L + ++P+ T +LD+ R+Q+ E+A D+ R R Sbjct: 122 EIRNLSMWATNGLLPERTYLLDMDPAQSHARLQHAEDRMEAAGNDFQRRT--------RV 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204 FLD+A +P+R H++D++ S + V I Sbjct: 174 AFLDLAEREPERFHVIDASQSIEDVWARI 202 >gi|322390021|ref|ZP_08063559.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903] gi|321143275|gb|EFX38715.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903] Length = 212 Score = 122 bits (305), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 114/208 (54%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G ISFEG EGAGK++ + + L+ K TREPGG AE R V+L Sbjct: 1 MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL GKI+L DRF+DSS AYQG ++ L Sbjct: 61 SMDAKTELLLYIASRRQHLVERVLPALAAGKIVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDVDVEEGLARIAKNQE-REVNRLDL---EGLELHQKVRQGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D++ SF++V ++L ++ Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVL 204 >gi|254785815|ref|YP_003073244.1| dTMP kinase [Teredinibacter turnerae T7901] gi|259494282|sp|C5BU64|KTHY_TERTT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|237685419|gb|ACR12683.1| dTMP kinase [Teredinibacter turnerae T7901] Length = 205 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 12/205 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG EG GK+T+++ ++ FL+ + DV TREPGGTP AE R +LL+ + Sbjct: 2 TGRFITVEGTEGVGKSTNLAFIEGFLRSRAIDVITTREPGGTPLAEELRELLLAKREEPV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121 A AE ++ AAR H+ ++ PAL G+ +LCDRF D++YAYQG + + L L+++ Sbjct: 62 DACAELLMVFAARAQHLNQLVAPALARGQWVLCDRFTDATYAYQG---AGRGLSLETISK 118 Query: 122 -EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 E VQ + PD T+ LD+ V +GL+R + R A LD FE +DV E+ R + Sbjct: 119 LEFLVQGSLQPDITVWLDIDVRLGLERARAR------ADLDRFEEEDVSFFERVRAGYRA 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 A P R +++ V T+I Sbjct: 173 RAEEAPARFCRINAGQPLAQVQTDI 197 >gi|297201354|ref|ZP_06918751.1| thymidylate kinase [Streptomyces sviceus ATCC 29083] gi|297147859|gb|EFH28761.1| thymidylate kinase [Streptomyces sviceus ATCC 29083] Length = 1065 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 8/201 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 507 DAGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAG 566 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 567 LSHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARIN 626 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P T++LD+ +I +R + D E + H + R FL +A Sbjct: 627 RWATNGLVPHLTVLLDVSPEIARERF--------TEAPDRLESEPAEFHARVRSGFLTLA 678 Query: 182 RNQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V+T Sbjct: 679 AADPGRYLVVDAGQEPEAVST 699 >gi|297587209|ref|ZP_06945854.1| thymidylate kinase [Finegoldia magna ATCC 53516] gi|297575190|gb|EFH93909.1| thymidylate kinase [Finegoldia magna ATCC 53516] Length = 203 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 111/204 (54%), Gaps = 7/204 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GK+T I + +L NYDV TREPGG+P AE R+++L + G Sbjct: 1 MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENTKMGY 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I PAL E KI+LCDRFL SS AYQG + + E + Sbjct: 61 RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRDLGIENVRKINEFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V PD + D+ LKR + SL + D E++ HE+ + +I N Sbjct: 121 INGVYPDFVLFFDVDPITTLKR---KSSLDTA---DRLEKEGNNFHERVYNGYKEIL-NS 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 I+D+ S + V + + ++ Sbjct: 174 EKNIEIIDATQSVEDVFSQCIKVL 197 >gi|295676547|ref|YP_003605071.1| thymidylate kinase [Burkholderia sp. CCGE1002] gi|295436390|gb|ADG15560.1| thymidylate kinase [Burkholderia sp. CCGE1002] Length = 206 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ + L+ K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ +VI PAL G +L DRF D+++AYQG Sbjct: 61 QQMD---LETEALLMFALRRQHLADVIEPALTRGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DLP + +R R + R D FE + E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLPPAVANER---RSAARNP---DRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ A P R I+DS+ S + + ++ Sbjct: 172 YMRRAEEAPYRFAIIDSSQSVARIQKQLEELI 203 >gi|301051766|ref|YP_003789977.1| thymidylate kinase [Bacillus anthracis CI] gi|300373935|gb|ADK02839.1| thymidylate kinase [Bacillus cereus biovar anthracis str. CI] Length = 208 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP+ TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPNLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|182437093|ref|YP_001824812.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777708|ref|ZP_08236973.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1] gi|178465609|dbj|BAG20129.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658041|gb|EGE42887.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1] Length = 1084 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 506 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD VD R R + D E + HE+ R FL +A Sbjct: 626 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAAFHERVRSGFLTLAA 677 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ +S+ T Sbjct: 678 ADPTRYLVVDAGQEPESITT 697 >gi|239989562|ref|ZP_04710226.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 11379] Length = 1070 Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats. Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 557 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD VD R R + D E + HE+ R FL +A Sbjct: 617 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAEFHERVRSGFLTLAA 668 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ +S+ T Sbjct: 669 ADPTRYLVVDAGQEPESITT 688 >gi|212635620|ref|YP_002312145.1| thymidylate kinase [Shewanella piezotolerans WP3] gi|212557104|gb|ACJ29558.1| Thymidylate kinase [Shewanella piezotolerans WP3] Length = 214 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 76/205 (37%), Positives = 116/205 (56%), Gaps = 10/205 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63 F+ EG+EGAGK++ I+L++ F+++ V TREPGGTP AE R ++ ++ D Sbjct: 13 FVVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKVANESDPLC 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++F AAR V NVI+P+L EGK +L DR SS AYQG L + S+ E Sbjct: 73 DEAECLIFYAARAQLVANVIKPSLAEGKWVLGDRHNLSSLAYQGGGRGLMPL-VSSISEA 131 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ PD T+ LD+ +GL R NR LD E++++ + R FL A N Sbjct: 132 TLKGFKPDLTLYLDIDPKLGLARAANR------GALDRIEQQELAFFNRTRATFLSYADN 185 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 D I+D++ S +V +I+ ++ Sbjct: 186 D-DSIMIIDASQSMAAVHKDIIAVL 209 >gi|161723306|ref|NP_246612.2| thymidylate kinase [Pasteurella multocida subsp. multocida str. Pm70] gi|14285512|sp|Q9CKE9|KTHY_PASMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 209 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EGIEGAGKTT + R L +D+ TREPGGTP AE R ++ Sbjct: 1 MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQ G R QHL L Sbjct: 61 EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHL-LH 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + E PD T+ LD+ +GL R + R LD E++++ + RQ + Sbjct: 120 TLKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++ R+ P + +D++ + VA ++ Sbjct: 174 ELVRHNP-KAVTIDASQTMSKVAEDV 198 >gi|229107717|ref|ZP_04237354.1| Thymidylate kinase [Bacillus cereus Rock1-15] gi|228675690|gb|EEL30897.1| Thymidylate kinase [Bacillus cereus Rock1-15] Length = 208 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H+ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKSVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|74317561|ref|YP_315301.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259] gi|123611774|sp|Q3SIM9|KTHY_THIDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|74057056|gb|AAZ97496.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259] Length = 204 Score = 121 bits (304), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 119/211 (56%), Gaps = 13/211 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+TH+ + +L+ + +V VTREPGGT E R +LL E Sbjct: 5 GKFITLEGVDGAGKSTHVGFVAEWLRGQGREVIVTREPGGTALGETLRELLLH---REMA 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121 A+ E ++ AAR H+ +I PAL G ++ DRF D+SYAYQ G R +++ + +L+ Sbjct: 62 ADTELLLMFAARQQHLAELILPALARGAWVVSDRFTDASYAYQCGGRRIAAER--IAALE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T++ D+P + +R R S+R + D FE++ + R +L A Sbjct: 120 DWVQRGFAPDLTLLFDVPPAVAEER---RSSVRAA---DRFEQEAGSFFARVRDAYLVRA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +P R H++D+ + +V I ++ +L Sbjct: 174 RAEPHRIHVLDARQTIDAVQAEIARLLQDLT 204 >gi|302379541|ref|ZP_07268026.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3] gi|303234538|ref|ZP_07321175.1| dTMP kinase [Finegoldia magna BVS033A4] gi|302312448|gb|EFK94444.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3] gi|302494372|gb|EFL54141.1| dTMP kinase [Finegoldia magna BVS033A4] Length = 203 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 7/204 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GK+T I + +L NYDV TREPGG+P AE R+++L + G Sbjct: 1 MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I PAL E KI+LCDRFL SS AYQG + ++ E + Sbjct: 61 RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD + D+ LKR + SL + D E++ HE+ + +I N Sbjct: 121 INGIFPDFVLFFDVDPITTLKR---KSSLDTA---DRLEKEGNNFHERVYNGYKEIL-NS 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 I+D+ S + V + + ++ Sbjct: 174 EKNIEIIDATQSVEDVFSQCIEVL 197 >gi|110003916|emb|CAK98256.1| thymidylate kinase protein [Spiroplasma citri] Length = 215 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 10/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDE 61 LFI+ EGI+G+GKTT LLK L+ + Y V +TREPGG AE R+V+LS G+D Sbjct: 3 LFITLEGIDGSGKTTISKLLKEKLRSEGYQVVLTREPGGNEIAEQIRNVILSKHNLGMDP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + EA+++ AAR HV I PAL G+I++CDRF+DS+ AYQG LD +Q Sbjct: 63 W---TEALLYIAARRQHVVEDILPALKRGEIVICDRFMDSTSAYQGYARGLGIWTLDEVQ 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I + PD T+ D+ + +R++ +R ++ + + H+K + + + Sbjct: 120 SIVLGTTKPDLTLFFDIEPTMASERMK----VRNEVEMNRLDLEKNSFHKKVYEGYQVLI 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R ++D++ V + V E++QK Sbjct: 176 SENAERIKVIDASKPVNEVLEQVYYYVDEIIQK 208 >gi|298491750|ref|YP_003721927.1| thymidylate kinase ['Nostoc azollae' 0708] gi|298233668|gb|ADI64804.1| thymidylate kinase ['Nostoc azollae' 0708] Length = 209 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 111/207 (53%), Gaps = 7/207 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG I FEG+EG GKTT + L ++L+ + +T EPGGT R +LL D+ Sbjct: 2 SGKLIVFEGVEGCGKTTQMHLCSQWLRDLSVSFSLTCEPGGTELGTHLRQLLLENSEDKP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E E +++ A R H+E ++P L +GK +LCDR+ DS+ AYQG ++ L Sbjct: 62 ISEITELLLYGADRAQHIEQELKPNLADGKYILCDRYTDSTIAYQGYGRGLSMSIINQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ + D TI LD+ V++GL R R+ A LD E++ + H + +Q + ++A Sbjct: 122 YIATGGLESDLTIWLDIDVEVGLARK------RDQATLDRIEQETIAFHRRVQQGYTELA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P R VD + S ++V I I+ Sbjct: 176 ATHPSRIFRVDGSLSKETVQQRIQEIL 202 >gi|228918981|ref|ZP_04082361.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840630|gb|EEM85891.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 208 Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQLI 203 >gi|296157859|ref|ZP_06840693.1| thymidylate kinase [Burkholderia sp. Ch1-1] gi|295892105|gb|EFG71889.1| thymidylate kinase [Burkholderia sp. Ch1-1] Length = 206 Score = 121 bits (303), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+S + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R R + R+ D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEIASER---RSAARDP---DRFESESEAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DSA S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSAQSITQIQRRLEELI 203 >gi|323351073|ref|ZP_08086730.1| thymidylate kinase [Streptococcus sanguinis VMC66] gi|322122797|gb|EFX94506.1| thymidylate kinase [Streptococcus sanguinis VMC66] Length = 212 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AE R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAETIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAKSES-REVNRLDL---EGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|125623282|ref|YP_001031765.1| thymidylate kinase [Lactococcus lactis subsp. cremoris MG1363] gi|166221749|sp|A2RIC4|KTHY_LACLM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12483716|gb|AAG53731.1|AF178425_1 TcsCorf1 [Lactococcus lactis subsp. cremoris MG1363] gi|124492090|emb|CAL97019.1| Tmk protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070033|gb|ADJ59433.1| thymidylate kinase [Lactococcus lactis subsp. cremoris NZ9000] Length = 211 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ +V TREPGG AE R ++L E Sbjct: 2 NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++FAAAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFAAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ D+ D+ L+R+ +NR E LD ER + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P R +D++ S + V + L ++ Sbjct: 177 AKEPGRFVKIDASQSLEKVVADTLEVL 203 >gi|288905947|ref|YP_003431169.1| thymidylate kinase [Streptococcus gallolyticus UCN34] gi|288732673|emb|CBI14245.1| thymidylate kinase [Streptococcus gallolyticus UCN34] Length = 211 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ +IGL R+ + + RE LD E+ D +H++ R+ +L + Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVRKGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A Q R +D++ V L+ + E + K Sbjct: 177 A-EQEKRIVTIDASRELADVVLETLHTILEQLAK 209 >gi|329910241|ref|ZP_08275259.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480] gi|327546227|gb|EGF31265.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480] Length = 205 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 110/209 (52%), Gaps = 15/209 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEGI+GAGK++H+S + L + V TREPGGTP E R VLL + E Sbjct: 9 FITFEGIDGAGKSSHLSFVADLLVARGIRVTSTREPGGTPLGEQLRSVLLH---QKMHLE 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---FLDSLQE 122 EA++ A+R +H+ VI PAL G ++ DRF D+++AYQG +HL L+ L++ Sbjct: 66 TEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQG---GGRHLPVAKLEQLEQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++ D+P+D+ R L + LD FE++ R +L A Sbjct: 123 WVHPHLQPDLTLLFDVPLDVA------RARLDATRSLDKFEQEQSDFFAGVRGEYLRRAA 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P R IVDS S V + I+ L Sbjct: 177 QFPARFRIVDSTQSMAQVRAALTAIMASL 205 >gi|170692442|ref|ZP_02883605.1| dTMP kinase [Burkholderia graminis C4D1M] gi|170142872|gb|EDT11037.1| dTMP kinase [Burkholderia graminis C4D1M] Length = 206 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R R + R+ D FE + E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANER---RSAARDP---DRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DS+ S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEELI 203 >gi|89070236|ref|ZP_01157560.1| thymidylate kinase [Oceanicola granulosus HTCC2516] gi|89044156|gb|EAR50314.1| thymidylate kinase [Oceanicola granulosus HTCC2516] Length = 202 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 10/193 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGI+G+GK+T LL L D +TREPGG+ AE R ++L+ Sbjct: 1 MAPGRFITFEGIDGSGKSTQARLLAERLP----DALLTREPGGSAGAEEIRALVLNGDPG 56 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E I PAL G+ ++CDRF DS+ YQG +D L Sbjct: 57 RWSAETELLLFTAARRDHLEKTIEPALAAGRTVICDRFADSTRVYQGATRGDLRATVDKL 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ PD T I+D+ + L R R FE + + E R FL + Sbjct: 117 HALTIGR-EPDLTFIIDMDPETALARGVARPGAER-----RFEDFGLALQETVRHGFLSL 170 Query: 181 ARNQPDRCHIVDS 193 AR +RC ++D Sbjct: 171 ARQFSERCIVIDG 183 >gi|297205016|ref|ZP_06922412.1| thymidylate kinase [Lactobacillus jensenii JV-V16] gi|297149594|gb|EFH29891.1| thymidylate kinase [Lactobacillus jensenii JV-V16] Length = 215 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKTT + L +++K ++ VTREPGG+ AEA R ++L+ E Sbjct: 2 AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G+++ DRF+DSS AYQG ++L ++ + Sbjct: 62 MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQG---MGRNLGIEKVA 118 Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 EI + + P+ T+ LD+ GL R+ +E D E++ + H+K + Sbjct: 119 EINQFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQ 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +I + P+R +VD++ V + L I+ + Sbjct: 175 EIVKRYPERIKVVDASQDIDQVVADCLAILKQ 206 >gi|306831966|ref|ZP_07465121.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425892|gb|EFM29009.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 211 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T+ D+ +IGL R+ + + RE LD E+ D +H++ R+ +L + Sbjct: 121 NDFVTDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVREGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A Q R +D++ V + L+ + E + K Sbjct: 177 A-EQEKRIVTIDASRELADVVSETLHTILEQLAK 209 >gi|228905827|ref|ZP_04069725.1| Thymidylate kinase [Bacillus thuringiensis IBL 200] gi|228853767|gb|EEM98526.1| Thymidylate kinase [Bacillus thuringiensis IBL 200] Length = 208 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + +++ V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQRAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ I+ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVVQII 203 >gi|184201527|ref|YP_001855734.1| thymidylate kinase [Kocuria rhizophila DC2201] gi|183581757|dbj|BAG30228.1| thymidylate kinase [Kocuria rhizophila DC2201] Length = 218 Score = 121 bits (303), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 73/197 (37%), Positives = 110/197 (55%), Gaps = 5/197 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG +GAGK+T +S L + L+ + V TREPGGTP AE+ R ++L Sbjct: 7 GALIVFEGGDGAGKSTQVSALVQALRAGGHTVTCTREPGGTPLAESVRALVLDPAHAPVA 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FA+AR DHV +IRPA+ G+I++CDRF+DSS AYQG + L + Sbjct: 67 PATEALLFASARADHVARLIRPAVERGEIVVCDRFVDSSVAYQGAGRGLGLARVADLNQW 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++Q ++PD T++LD VD + R + D E +D+ H F ++A Sbjct: 127 ALQGLVPDLTVLLD--VD---QTTAQARRRRRGSASDRMEAEDLAFHATVNAAFRELAAA 181 Query: 184 QPDRCHIVDSAHSFQSV 200 P R ++D+A S + + Sbjct: 182 APQRYLVLDAAESAERI 198 >gi|163789941|ref|ZP_02184377.1| thymidylate kinase [Carnobacterium sp. AT7] gi|159874881|gb|EDP68949.1| thymidylate kinase [Carnobacterium sp. AT7] Length = 211 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 117/214 (54%), Gaps = 8/214 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+ EG +GAGKT+ I L+ ++ ++ TREPGG+ AE R ++L+ E Sbjct: 3 GIFITIEGPDGAGKTSVIKKLIPMLVETIQQEIVATREPGGSRIAEEIRELILNPENIEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R H+ I PAL GK+++CDRF+DSS AYQG + + + Sbjct: 63 DIRTEALLYAAGRRQHLVEKIIPALETGKVVICDRFVDSSLAYQGVARGIGISEVAEINQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ +GL+R+ R+ D +++ + HEK R +L IA+ Sbjct: 123 FATDNLSPDLTLYLDIEAHLGLERINQNKDNRQ---FDRLDQETLEFHEKVRSAYLAIAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 Q +R +D++ + V + +E + KR+ Sbjct: 180 EQSERIVQIDASQELEKVVAD----CYETIIKRI 209 >gi|228937333|ref|ZP_04099980.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970219|ref|ZP_04130879.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976789|ref|ZP_04137202.1| Thymidylate kinase [Bacillus thuringiensis Bt407] gi|228782885|gb|EEM31050.1| Thymidylate kinase [Bacillus thuringiensis Bt407] gi|228789454|gb|EEM37373.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822291|gb|EEM68272.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937822|gb|AEA13718.1| thymidylate kinase [Bacillus thuringiensis serovar chinensis CT-43] Length = 208 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R++ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIEKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R +V++ + + ++ I+ Sbjct: 175 VVERFSERIVLVNADQPMEKLIEEVVQII 203 >gi|91775853|ref|YP_545609.1| thymidylate kinase [Methylobacillus flagellatus KT] gi|123078858|sp|Q1H169|KTHY_METFK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91709840|gb|ABE49768.1| thymidylate kinase [Methylobacillus flagellatus KT] Length = 203 Score = 120 bits (302), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 110/208 (52%), Gaps = 9/208 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK++HI + L+ + +V TREPGGTP E R +LL + Sbjct: 3 GRFITLEGMDGAGKSSHIESIVSVLEGRGLEVVSTREPGGTPLGEKLRELLLH---ERMH 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++ AAR +H+ VI PAL G ++ DRF D+S+AYQ +++L+ Sbjct: 60 VETETLLMFAARREHIAEVIEPALARGAWVVSDRFTDASFAYQCGGRGVPCEKVEALEAW 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T++ D+PV+I + R L + D FER+ + R +L A Sbjct: 120 VHPDLQPDLTLLFDVPVEISVAR------LAAARTPDKFERESAEFFRRIRNGYLARAEA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 QP R ++D +V +L+I+ E Sbjct: 174 QPQRFRLIDGNRPMDTVRKEVLDIMREF 201 >gi|217077269|ref|YP_002334987.1| tmk thymidylate kinase [Thermosipho africanus TCF52B] gi|226732664|sp|B7IHT2|KTHY_THEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|217037124|gb|ACJ75646.1| tmk thymidylate kinase [Thermosipho africanus TCF52B] Length = 201 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 9/209 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T ++LL ++L+ K V REPGGT E R +LL ++ Sbjct: 1 MFIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIREILLDNNLN-INK 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE VI+P L G +L DRF DSS AYQG + + +L + + Sbjct: 60 RSELLLFLASRAQLVEEVIKPHLKRGFFVLADRFSDSSIAYQGGARNIGVETVSTLNDFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +D+P I ++R++++ LD E++ + EK R +L +++ + Sbjct: 120 TDNIYPDIVFYIDIPTKIAMERLKDK-------NLDRLEKEGQIFLEKVRNTYLKLSKLR 172 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 D I+D S +V I +IV + +Q Sbjct: 173 -DNFFIIDGTKSIDNVFAEIKSIVEKHLQ 200 >gi|206977923|ref|ZP_03238810.1| thymidylate kinase [Bacillus cereus H3081.97] gi|206743829|gb|EDZ55249.1| thymidylate kinase [Bacillus cereus H3081.97] gi|324324020|gb|ADY19280.1| thymidylate kinase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 208 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDITFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|289449651|ref|YP_003475316.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184198|gb|ADC90623.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 212 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/216 (36%), Positives = 115/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+FEGI+G+GKTT ++LL +L+R+N V V REPGGT EA R +LLS Sbjct: 1 MRKGQLITFEGIDGSGKTTQLNLLADYLRRQNEAVVVLREPGGTELGEAVRSLLLSSKYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +E +F AAR VI PAL GK +LCDRF+DS+ AYQG L SL Sbjct: 61 KMSDRSELYLFLAARAQLCNEVIAPALSLGKFVLCDRFIDSTIAYQGYGRGLDPATLKSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSL-RESACLDYFERKDVMIHEKRRQIFL 178 ++ + P+ T L +PV ++R+ R +L R A D+F + V ++ Sbjct: 121 NSMATAGISPNITFYLRIPVATAVERMMVRDIALDRMEAQADHFRQAVVKGYDV------ 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A +P R + + S +++ ILN V + K Sbjct: 175 -LAATEP-RFVTIKADQSIENIHEIILNEVRRFIYK 208 >gi|30260220|ref|NP_842597.1| thymidylate kinase [Bacillus anthracis str. Ames] gi|47525283|ref|YP_016632.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183064|ref|YP_026316.1| thymidylate kinase [Bacillus anthracis str. Sterne] gi|49480017|ref|YP_034384.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145185|ref|YP_081643.1| thymidylate kinase [Bacillus cereus E33L] gi|65317490|ref|ZP_00390449.1| COG0125: Thymidylate kinase [Bacillus anthracis str. A2012] gi|165872581|ref|ZP_02217213.1| thymidylate kinase [Bacillus anthracis str. A0488] gi|167635117|ref|ZP_02393434.1| thymidylate kinase [Bacillus anthracis str. A0442] gi|167641523|ref|ZP_02399771.1| thymidylate kinase [Bacillus anthracis str. A0193] gi|170688929|ref|ZP_02880131.1| thymidylate kinase [Bacillus anthracis str. A0465] gi|170707594|ref|ZP_02898047.1| thymidylate kinase [Bacillus anthracis str. A0389] gi|177655343|ref|ZP_02936872.1| thymidylate kinase [Bacillus anthracis str. A0174] gi|190568957|ref|ZP_03021858.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I] gi|196036358|ref|ZP_03103755.1| thymidylate kinase [Bacillus cereus W] gi|196041790|ref|ZP_03109080.1| dTMP kinase [Bacillus cereus NVH0597-99] gi|218901231|ref|YP_002449065.1| thymidylate kinase [Bacillus cereus AH820] gi|227812703|ref|YP_002812712.1| thymidylate kinase [Bacillus anthracis str. CDC 684] gi|228912770|ref|ZP_04076418.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925284|ref|ZP_04088381.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931533|ref|ZP_04094440.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943837|ref|ZP_04106223.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089163|ref|ZP_04220445.1| Thymidylate kinase [Bacillus cereus Rock3-42] gi|229119693|ref|ZP_04248955.1| Thymidylate kinase [Bacillus cereus 95/8201] gi|229603011|ref|YP_002864681.1| dTMP kinase [Bacillus anthracis str. A0248] gi|254682343|ref|ZP_05146204.1| thymidylate kinase [Bacillus anthracis str. CNEVA-9066] gi|254724171|ref|ZP_05185956.1| thymidylate kinase [Bacillus anthracis str. A1055] gi|254733566|ref|ZP_05191287.1| thymidylate kinase [Bacillus anthracis str. Western North America USA6153] gi|254744666|ref|ZP_05202345.1| thymidylate kinase [Bacillus anthracis str. Kruger B] gi|254756371|ref|ZP_05208400.1| thymidylate kinase [Bacillus anthracis str. Vollum] gi|254762427|ref|ZP_05214269.1| thymidylate kinase [Bacillus anthracis str. Australia 94] gi|300119126|ref|ZP_07056827.1| thymidylate kinase [Bacillus cereus SJ1] gi|46576505|sp|Q81W11|KTHY_BACAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59798175|sp|Q63HH8|KTHY_BACCZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59798283|sp|Q6HPY6|KTHY_BACHK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808275|sp|C3P9H5|KTHY_BACAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808276|sp|C3LJ02|KTHY_BACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|30253541|gb|AAP24083.1| dTMP kinase [Bacillus anthracis str. Ames] gi|47500431|gb|AAT29107.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor'] gi|49176991|gb|AAT52367.1| thymidylate kinase [Bacillus anthracis str. Sterne] gi|49331573|gb|AAT62219.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978654|gb|AAU20204.1| thymidylate kinase [Bacillus cereus E33L] gi|164711709|gb|EDR17254.1| thymidylate kinase [Bacillus anthracis str. A0488] gi|167510508|gb|EDR85906.1| thymidylate kinase [Bacillus anthracis str. A0193] gi|167529591|gb|EDR92341.1| thymidylate kinase [Bacillus anthracis str. A0442] gi|170127590|gb|EDS96464.1| thymidylate kinase [Bacillus anthracis str. A0389] gi|170667153|gb|EDT17914.1| thymidylate kinase [Bacillus anthracis str. A0465] gi|172080184|gb|EDT65277.1| thymidylate kinase [Bacillus anthracis str. A0174] gi|190559881|gb|EDV13865.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I] gi|195990988|gb|EDX54959.1| thymidylate kinase [Bacillus cereus W] gi|196027410|gb|EDX66027.1| dTMP kinase [Bacillus cereus NVH0597-99] gi|218540056|gb|ACK92454.1| thymidylate kinase [Bacillus cereus AH820] gi|227003623|gb|ACP13366.1| dTMP kinase [Bacillus anthracis str. CDC 684] gi|228663718|gb|EEL19296.1| Thymidylate kinase [Bacillus cereus 95/8201] gi|228694126|gb|EEL47807.1| Thymidylate kinase [Bacillus cereus Rock3-42] gi|228815794|gb|EEM62029.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828085|gb|EEM73812.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834331|gb|EEM79871.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846830|gb|EEM91834.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267419|gb|ACQ49056.1| dTMP kinase [Bacillus anthracis str. A0248] gi|298723448|gb|EFI64189.1| thymidylate kinase [Bacillus cereus SJ1] Length = 208 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|254388750|ref|ZP_05003983.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC 27064] gi|197702470|gb|EDY48282.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC 27064] Length = 747 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 151 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 210 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV +V+RPAL G +++ DR++DSS AYQG + + Sbjct: 211 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 270 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 271 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 322 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P R +VD+ ++V T + Sbjct: 323 GDPARYLVVDAGQEPEAVTTVV 344 >gi|302559329|ref|ZP_07311671.1| dTMP kinase [Streptomyces griseoflavus Tu4000] gi|302476947|gb|EFL40040.1| dTMP kinase [Streptomyces griseoflavus Tu4000] Length = 854 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +H++ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHIDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARINR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P R +VD+ +SV T I Sbjct: 680 ADPGRYLVVDAGQEPESVTTVI 701 >gi|186475808|ref|YP_001857278.1| thymidylate kinase [Burkholderia phymatum STM815] gi|229487611|sp|B2JGP7|KTHY_BURP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|184192267|gb|ACC70232.1| dTMP kinase [Burkholderia phymatum STM815] Length = 206 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ + L++K V +TREPGGT E+ R +LL Sbjct: 1 MARGKFITFEGIDGAGKTTHLGWFRDRLEQKVAPAGRSVVMTREPGGTKLGESLRDILLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 EAMD---LETEALLMFAARREHLAQVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+P D +R R + R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPDTASER---RSAAR---APDRFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DS S + + +++ Sbjct: 172 YLRRAEEAPYRFAIIDSTRSIADIQKQLEDLI 203 >gi|229009541|ref|ZP_04166768.1| Thymidylate kinase [Bacillus mycoides DSM 2048] gi|228751685|gb|EEM01484.1| Thymidylate kinase [Bacillus mycoides DSM 2048] Length = 208 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKKEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ + + RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARI-GKDAGREVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R +V++ + + ++ I+ Sbjct: 175 VVERFSNRIVLVNADQPMKKLIEEVVQII 203 >gi|91783552|ref|YP_558758.1| thymidylate kinase [Burkholderia xenovorans LB400] gi|123062899|sp|Q13YY3|KTHY_BURXL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91687506|gb|ABE30706.1| thymidylate kinase [Burkholderia xenovorans LB400] Length = 206 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+S + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL ++ +R R + R+ D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEVASER---RSAARDP---DRFESESEAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DSA S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIAQIQRRLEELI 203 >gi|84495036|ref|ZP_00994155.1| thymidylate kinase [Janibacter sp. HTCC2649] gi|84384529|gb|EAQ00409.1| thymidylate kinase [Janibacter sp. HTCC2649] Length = 210 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 104/193 (53%), Gaps = 10/193 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+FEG +GAGK+T + LL L+ +V VTR+PGGTP R ++L D Sbjct: 1 MTQGLFIAFEGGDGAGKSTQVRLLAAALESLGREVVVTRQPGGTPLGAQIRDLVLHG--D 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA++FAA + HV+ +IRPA+ G +++ DR+ DS+ AYQG + L Sbjct: 59 HVSPRAEALLFAADKAHHVDQLIRPAMDRGSVVITDRYTDSAVAYQGAGRDLGASEVHEL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q +V ++PD T+I+D+ G + R D E + H+ R FL + Sbjct: 119 QMWAVGSLVPDLTVIVDVTAQEGRR--------RRGEVHDRLESEADAFHDAIRHHFLAM 170 Query: 181 ARNQPDRCHIVDS 193 A+ P+R +VD Sbjct: 171 AQGSPERYLVVDG 183 >gi|163938038|ref|YP_001642922.1| thymidylate kinase [Bacillus weihenstephanensis KBAB4] gi|229131038|ref|ZP_04259951.1| Thymidylate kinase [Bacillus cereus BDRD-ST196] gi|229165020|ref|ZP_04292816.1| Thymidylate kinase [Bacillus cereus AH621] gi|229487581|sp|A9VN43|KTHY_BACWK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|163860235|gb|ABY41294.1| dTMP kinase [Bacillus weihenstephanensis KBAB4] gi|228618405|gb|EEK75434.1| Thymidylate kinase [Bacillus cereus AH621] gi|228652375|gb|EEL08299.1| Thymidylate kinase [Bacillus cereus BDRD-ST196] Length = 208 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ + + RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARI-GKDAGREVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R +V++ + + ++ I+ Sbjct: 175 VVERFSNRIVLVNADQPMKKLIEEVVQII 203 >gi|167755132|ref|ZP_02427259.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402] gi|237733442|ref|ZP_04563923.1| thymidylate kinase [Mollicutes bacterium D7] gi|167705182|gb|EDS19761.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402] gi|229383477|gb|EEO33568.1| thymidylate kinase [Coprobacillus sp. D7] Length = 206 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 109/205 (53%), Gaps = 5/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG +G+GKTT ++ LQ + Y V +TREPGG AE R ++L Sbjct: 3 GKFITLEGPDGSGKTTVSKIVVEQLQMEGYKVLLTREPGGIDIAEQIRKIILDTNNITMD 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AAAR H+ + PAL +G I++CDRF+DSS YQG + + + Sbjct: 63 ARTEALLYAAARRQHLVEKVAPALNDGYIVICDRFVDSSLVYQGVGRKIGIEEVYQINQF 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD TI DLP ++GL R+ N R + LD E D H+ ++ I Sbjct: 123 AIGNIKPDATIFFDLPYEVGLARINN--GERVADRLD-LESDD--FHKDVYNGYMTICEK 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +R +D++ + V ++N++ Sbjct: 178 YAERITKIDASKTIDEVVAQVINVI 202 >gi|256852109|ref|ZP_05557496.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN] gi|260661321|ref|ZP_05862234.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN] gi|282934782|ref|ZP_06340020.1| dTMP kinase [Lactobacillus jensenii 208-1] gi|256615521|gb|EEU20711.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN] gi|260547776|gb|EEX23753.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN] gi|281301145|gb|EFA93451.1| dTMP kinase [Lactobacillus jensenii 208-1] Length = 215 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKTT + L +++K ++ VTREPGG+ AEA R ++L+ E Sbjct: 2 AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G+++ DRF+DSS AYQG ++L ++ + Sbjct: 62 MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQG---MGRNLGIEKVA 118 Query: 122 EI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 EI + + P+ T+ LD+ GL R+ +E D E++ + H+K + Sbjct: 119 EINQFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQ 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +I + P+R +VD++ V + L I+ + Sbjct: 175 EIVKRYPERIKVVDASQDIDQVIADCLAILKQ 206 >gi|14520694|ref|NP_126169.1| thymidylate kinase [Pyrococcus abyssi GE5] gi|13629362|sp|Q9V1E9|KTHY_PYRAB RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|5457910|emb|CAB49400.1| tmk thymidylate kinase (dTMP kinase) [Pyrococcus abyssi GE5] Length = 205 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 116/208 (55%), Gaps = 15/208 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G F+ EGI+G+GKTT LL + + + +DV +T+EP T R ++L + Sbjct: 3 GYFVVLEGIDGSGKTTQAKLLAEWFEEQGWDVLLTKEPTDTEFGRLIRELVLKNSIIDGS 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EAEA++FAA R +HV+ VI PAL +GK+++CDR+L SS AYQ R S L+ L Sbjct: 63 RISYEAEALLFAADRAEHVKKVILPALEKGKVVICDRYLYSSLAYQWARGLS----LEWL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ PD I+LDLPV ++R + R ++ E L +RK M + K ++F ++ Sbjct: 119 MQINSFAPRPDLAILLDLPVKESIRRTKARGNMSEFDKLLELQRKVRMNYLKLAEMFKEM 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 IV++ S + V +I+ +V Sbjct: 179 --------RIVNAMASVEEVHEDIVALV 198 >gi|217957606|ref|YP_002336148.1| thymidylate kinase [Bacillus cereus AH187] gi|228983286|ref|ZP_04143500.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229136875|ref|ZP_04265503.1| Thymidylate kinase [Bacillus cereus BDRD-ST26] gi|229153810|ref|ZP_04281941.1| Thymidylate kinase [Bacillus cereus ATCC 4342] gi|229194421|ref|ZP_04321225.1| Thymidylate kinase [Bacillus cereus m1293] gi|226732653|sp|B7HPU1|KTHY_BACC7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|217067456|gb|ACJ81706.1| thymidylate kinase [Bacillus cereus AH187] gi|228589011|gb|EEK47025.1| Thymidylate kinase [Bacillus cereus m1293] gi|228629614|gb|EEK86310.1| Thymidylate kinase [Bacillus cereus ATCC 4342] gi|228646540|gb|EEL02746.1| Thymidylate kinase [Bacillus cereus BDRD-ST26] gi|228776400|gb|EEM24752.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 208 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|42779109|ref|NP_976356.1| thymidylate kinase [Bacillus cereus ATCC 10987] gi|59798342|sp|Q73FH8|KTHY_BACC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|42735024|gb|AAS38964.1| thymidylate kinase [Bacillus cereus ATCC 10987] Length = 208 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDITFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|257069727|ref|YP_003155982.1| thymidylate kinase [Brachybacterium faecium DSM 4810] gi|256560545|gb|ACU86392.1| thymidylate kinase [Brachybacterium faecium DSM 4810] Length = 243 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 19/216 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL--QRKNYD--VHVTREPGGTPAAEAARHVLLSCGV 59 G+FISFEG +GAGK+T + LL L +R + + TREPGGT E+ R +LL Sbjct: 21 GVFISFEGGDGAGKSTQMQLLHDHLVTERSVAEDLILTTREPGGTALGESIRELLLHG-- 78 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLF 116 ++ AEA+++AA R HV V+RP L G ++L DR+LDSS AYQG E D+ + Sbjct: 79 EDVDVRAEALLYAADRAHHVSTVVRPHLARGGLVLGDRYLDSSVAYQGAGRELDAEE--- 135 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +L +V ++P TI+LD+P Q R SA D E + HE R+ Sbjct: 136 ITTLSLWAVDGLLPHRTILLDVP-------PQTLDERRGSAGRDRLESAGLEFHEAVRRE 188 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 FLD+A+ P+R ++D + V +L V E++ Sbjct: 189 FLDLAQADPERYAVIDGTLPPEEVHDQVLAAVGEVL 224 >gi|217967176|ref|YP_002352682.1| dTMP kinase [Dictyoglomus turgidum DSM 6724] gi|217336275|gb|ACK42068.1| dTMP kinase [Dictyoglomus turgidum DSM 6724] Length = 207 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 65/191 (34%), Positives = 109/191 (57%), Gaps = 11/191 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + LFI+FEGI+G+GKTT LLK + K Y VH+TREPGGT R +LL+ Sbjct: 1 MKNNLFITFEGIDGSGKTTQALLLKEHFESKGYKVHLTREPGGTDVGNKIREILLNPAFS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA ++ A+R+++ N+I+ L E +++C+R+ DS+ AYQG + L + Sbjct: 61 -INYWTEAFLYLASRVENTINIIK-KLKENYVVICERYADSTLAYQGYGRNLPLELLVEM 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ + P+ TI++DL ++ L+R D ER+++ + K R+ +L+I Sbjct: 119 NQIATFGLKPNLTILIDLDPELALRR---------KKSFDRIERENIEFYYKVRKGYLEI 169 Query: 181 ARNQPDRCHIV 191 A+ + +R I+ Sbjct: 170 AKKEKERFIII 180 >gi|228478159|ref|ZP_04062767.1| thymidylate kinase [Streptococcus salivarius SK126] gi|228249838|gb|EEK09108.1| thymidylate kinase [Streptococcus salivarius SK126] Length = 209 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKTT + +LL R + V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTTVLEALLPRLREVYPAQVVTTREPGGVAIAEQIREVILDVNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L +G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L PD T++ D+ + GL R+ RE LD E+ D +H++ RQ +LD Sbjct: 121 LNAYVTDGYKPDVTLLFDVDSETGLARIAASGE-REVNRLD-LEKLD--LHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A+ +P+R ++D++ +F+ V ++ Sbjct: 177 LAKAEPERIKLIDASQAFEDVVEQAWKVI 205 >gi|209517025|ref|ZP_03265873.1| dTMP kinase [Burkholderia sp. H160] gi|209502556|gb|EEA02564.1| dTMP kinase [Burkholderia sp. H160] Length = 206 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ + L+ K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRAVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 QKMD---LETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DLP + +R R + R D FE + E+ R Sbjct: 118 LEALERWVQGGFQPDLTVLFDLPPAVANER---RSAARNP---DRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ A P R I+DS+ S + + ++ Sbjct: 172 YMRRAEEAPHRFAIIDSSQSIARIQKQLDELI 203 >gi|119963206|ref|YP_946682.1| thymidylate kinase [Arthrobacter aurescens TC1] gi|119950065|gb|ABM08976.1| thymidylate kinase [Arthrobacter aurescens TC1] Length = 229 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 7/217 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+FEG +GAGK+T + L L+ + V TREPGGTP E R ++L G Sbjct: 5 SPGLFIAFEGGDGAGKSTQAARLSDALESQGLSVLRTREPGGTPIGEKLRSLVLDHGNGT 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H VIRPAL G +++ DR++DSS AYQG + SL Sbjct: 65 IDPRTEALMFAAARAAHASQVIRPALAGGTVVITDRYIDSSVAYQGAGRGLGAEGVLSLN 124 Query: 122 EISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + + PD T++LD+ P D +R A D E + H R FLD+ Sbjct: 125 EWATEGLHPDLTVLLDVDPSDGRQRRTAG------DATEDRLESEPDHFHSAIRHAFLDL 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A P ++ ++ +++A IL V L+ R+S Sbjct: 179 AAAAPSSYLVLAASADIETLAAQILERVETLLGDRIS 215 >gi|88859588|ref|ZP_01134228.1| thymidylate kinase [Pseudoalteromonas tunicata D2] gi|88818605|gb|EAR28420.1| thymidylate kinase [Pseudoalteromonas tunicata D2] Length = 209 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 13/202 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG+EGAGK+T I+L + L+ + TREPGGTP AE+ R+++ + + AE Sbjct: 5 FIVIEGLEGAGKSTAIALCQEILKAHQVNFVNTREPGGTPLAESLRNLVKATHQEIMSAE 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSLQE 122 AE ++ AAR + NVIRPAL G+ +L DR SS AYQG E DSS L++L Sbjct: 65 AELLIMYAARAQLLTNVIRPALANGQWVLGDRHNLSSLAYQGGGRELDSST---LNALSN 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ + PD TI LD+ +GL R R LD E++ + E+ R +L IA Sbjct: 122 IVLKGLKPDLTIYLDIDPAVGLARAAGR------GALDRIEQEQLSFFERTRAQYLAIAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 + P +V + +V +I Sbjct: 176 SDPS-IKVVQAGQEISAVHQDI 196 >gi|116511255|ref|YP_808471.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11] gi|122940342|sp|Q031S3|KTHY_LACLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116106909|gb|ABJ72049.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11] Length = 211 Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 116/207 (56%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ +V TREPGG AE R ++L E Sbjct: 2 NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++F AAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFEAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ D+ D+ L+R+ +NR E LD ER + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D++ S + V + L ++ Sbjct: 177 AKEPERFVKIDASQSLEKVVADTLEVL 203 >gi|281490940|ref|YP_003352920.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147] gi|281374698|gb|ADA64218.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147] Length = 211 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ ++ TREPGG AE R ++L E Sbjct: 2 NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++FAAAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ D+ D+ L+R+ +NR E LD ER + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D++ + V + L+++ Sbjct: 177 VKEPERFVKIDASQPLEKVVADTLSVL 203 >gi|220906428|ref|YP_002481739.1| dTMP kinase [Cyanothece sp. PCC 7425] gi|254808287|sp|B8HXT9|KTHY_CYAP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219863039|gb|ACL43378.1| dTMP kinase [Cyanothece sp. PCC 7425] Length = 234 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/219 (32%), Positives = 113/219 (51%), Gaps = 15/219 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-------------DVHVTREPGGTPAAEAA 50 G I FEG EG+GKTT + +++L+ + + VTREPGGT Sbjct: 3 GKLIVFEGGEGSGKTTQLQRSRQWLESSGWLARLQQTLPTLAKPLLVTREPGGTALGIKL 62 Query: 51 RHVLLSCGV-DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 R +LL+ D + E ++FAA R HV ++P L G ++LCDRF DS+ AYQG Sbjct: 63 RQLLLNSDPEDVIQSRTELLLFAADRAQHVATRLQPHLEAGGLILCDRFTDSTVAYQGYG 122 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 +D L +I+ + D T+ LDL V++GL+R + R + LD ER ++ Sbjct: 123 RGLSLALIDQLNQIATDGLTSDLTLWLDLDVEMGLERSRQRLQ-QSGGGLDRIERGEIAF 181 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 H++ +Q F +++ P+R +D++ VA I I+ Sbjct: 182 HQRVQQGFRALSQAAPERIVTIDASQPEAMVADKIQRIL 220 >gi|239943104|ref|ZP_04695041.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 15998] Length = 1042 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 469 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 528 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 529 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 588 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD VD R R + D E + HE+ R FL +A Sbjct: 589 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAEFHERVRSGFLTLAA 640 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ +S+ T Sbjct: 641 ADPTRYLVVDAGQEPESITT 660 >gi|330686068|gb|EGG97690.1| dTMP kinase [Staphylococcus epidermidis VCU121] Length = 203 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 114/195 (58%), Gaps = 8/195 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT + + L ++YDV TREPGG P E R V+L ++ Sbjct: 4 FITFEGPEGSGKTTVLKAVAEKLA-QHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL +I+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ + + R+ LD ++D+ HEK + + + N+P Sbjct: 121 NGLYPDLTIYLDVSAEVGRERILS--NQRDQNRLD---QEDIDFHEKVIEGYHQVIHNEP 175 Query: 186 DRCHIVDSAHSFQSV 200 +R +D+ S + V Sbjct: 176 ERFVQIDADQSIEEV 190 >gi|229053878|ref|ZP_04195313.1| Thymidylate kinase [Bacillus cereus AH603] gi|228721419|gb|EEL72939.1| Thymidylate kinase [Bacillus cereus AH603] Length = 208 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIGKDVG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R +V++ + + ++ I+ Sbjct: 175 VVERFSNRIVLVNADQPMKKLIEEVVQII 203 >gi|331701730|ref|YP_004398689.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929] gi|329129073|gb|AEB73626.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929] Length = 216 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 116/210 (55%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ +++ F Q + VTREPGG +E R V+L E Sbjct: 2 NGKFITFEGPDGAGKTSVMNRVIEVFNQEIGDQLLVTREPGGNKISEEIRKVILDRENTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL + K++LCDR++DSS AYQG + + Sbjct: 62 MDYRTEALLYAAARRQHLVETILPALKQNKLVLCDRYVDSSVAYQGAGRQIGMAQVAKMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++++P TI D+PVD+GL R+ R+ + +D + + H++ + ++ + Sbjct: 122 EFATEKLLPFKTIYFDIPVDVGLDRIAEH---RDRSKIDRLDVETNEFHKRVHEGYMKVR 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 DR +D+ V + + I+ ++ Sbjct: 179 DENADRFISIDATQPINRVVNDTIKIIHQI 208 >gi|295395540|ref|ZP_06805734.1| integral membrane protein with kinase activity [Brevibacterium mcbrellneri ATCC 49030] gi|294971559|gb|EFG47440.1| integral membrane protein with kinase activity [Brevibacterium mcbrellneri ATCC 49030] Length = 824 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 123/209 (58%), Gaps = 11/209 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD 60 ++GLFI+ EG +GAGKTT I L L+ + +D V TREPGGTP ++ R VLL + Sbjct: 472 STGLFIAIEGGDGAGKTTQIRKLVEHLESRGFDPVIATREPGGTPVGKSIRSVLLDG--E 529 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119 ++EA+++AA R HV ++ P+L + ++ DR++DSS AYQ G R+ S+ L + Sbjct: 530 AVSKKSEALLYAADRAHHVATLVAPSLEQDGAVVTDRYIDSSLAYQAGGRELSEDDVL-A 588 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++P+ T++LD+ + +R+ N RE A ++ +++ + ++ R FL Sbjct: 589 LSRWATSGLVPNLTLVLDIDPRVAAERMGN----REDA--NHLDKQSLEFKDRVRAGFLR 642 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A +PDR ++ + S VA +I +V Sbjct: 643 LAEAEPDRYAVIPAGRSVNEVAEHIQRVV 671 >gi|190571302|ref|YP_001975660.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018699|ref|ZP_03334507.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238057702|sp|B3CM94|KTHY_WOLPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|190357574|emb|CAQ55013.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995650|gb|EEB56290.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 205 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/189 (35%), Positives = 110/189 (58%), Gaps = 15/189 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL + ++ +V +TREPGGT AE R LL +D Sbjct: 1 MFITFEGIDGSGKTTQSELLANYFKQIHGENNVVLTREPGGTDFAEKIRGSLLKDNIDPI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++F + R +H++ +I PAL EGK ++CDRF+DS+ AYQG + L + Sbjct: 61 ---SELLLFTSMRYEHMKELILPALKEGKTVICDRFIDSTIAYQGYGLGVDLSLIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+ PD T ILD+ V +GL R +++ + +E + + K R+ F +IA Sbjct: 118 L-VEIKYPDITFILDIDVQVGLSRAKDK---------NKYEEMSIDFYHKIRKGFQEIAI 167 Query: 183 NQPDRCHIV 191 + +RC+++ Sbjct: 168 KESNRCNVI 176 >gi|209527775|ref|ZP_03276269.1| dTMP kinase [Arthrospira maxima CS-328] gi|209491808|gb|EDZ92169.1| dTMP kinase [Arthrospira maxima CS-328] Length = 231 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 76/229 (33%), Positives = 115/229 (50%), Gaps = 25/229 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50 +G I FEGIEG GKTT I ++ +L + V VTREPGGT + Sbjct: 2 AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSSGGKLHQRGVQVTREPGGTQLGQHL 61 Query: 51 RHVLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 R +LL + E +E +++AA R H+E +I+P L +G I+LCDRF DS+ AYQG Sbjct: 62 RDLLLHHDIREPLSDRSELLLYAADRAQHIETLIKPLLDQGTIILCDRFTDSTLAYQGYG 121 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + +I+ V+PD T+ L++PV+ GL R++ R +D E+ D+ Sbjct: 122 RGLDLQQIHQINQIATGGVVPDLTLWLNVPVEAGLTRIKARKK------VDRIEQADLEF 175 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV------WELV 212 H + + F +A+ P R +D V I NI+ W L+ Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKLLEWGLI 224 >gi|313902253|ref|ZP_07835659.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965] gi|313467483|gb|EFR62991.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965] Length = 250 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 9/201 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG+GK+T +++ +L+ + + REPGGT A LL G Sbjct: 47 GWFITLEGGEGSGKSTQAAVVMDWLRSRGIPSRLVREPGGT-ALGERLRELLLDGAGRPV 105 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++FAAAR VE VI PAL+ G+ ++CDR++DSS AYQG + S+ + Sbjct: 106 PMAEMLMFAAARAQLVETVILPALLAGETVVCDRYVDSSLAYQGAGLGLGGTTVWSVNRL 165 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + ++PD T++ D P D+ R LR A D E +D H + RQ +LD+AR Sbjct: 166 ATRGLLPDLTLLFDCPPDVA------RARLRRPA--DGIESRDTGFHHRVRQGYLDLARA 217 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 +P R ++D+ VA + Sbjct: 218 EPRRIVVIDATRPALVVAEAV 238 >gi|70727528|ref|YP_254444.1| thymidylate kinase [Staphylococcus haemolyticus JCSC1435] gi|123659174|sp|Q4L3D9|KTHY_STAHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|68448254|dbj|BAE05838.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 203 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 12/210 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI+FEG EG+GKTT +L+R ++ ++Y + TREPGG P E R V+L Sbjct: 4 FITFEGPEGSGKTT---VLQRVSEKLAQDYQLIATREPGGVPTGEEIRKVVLEGA--NMD 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + L + Sbjct: 59 IRTEAMLFAASRREHLVEKVVPALNDNKIVLCDRYIDSSLAYQGYARGIGIEEVKQLNDF 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD TI LD+ ++G R+ L+ + +++D+ HEK + + I + Sbjct: 119 AINGLYPDLTIYLDITAEVGRDRI-----LKNQRDQNRLDKEDIAFHEKVIEGYRQIIQE 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R +VD+ + V I+ ++ Sbjct: 174 TPQRFAVVDATRNIDDVVNETYEIILNFLK 203 >gi|290958517|ref|YP_003489699.1| thymidylate kinase [Streptomyces scabiei 87.22] gi|260648043|emb|CBG71151.1| putative thymidylate kinase [Streptomyces scabiei 87.22] Length = 1110 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 508 TGFFIALEGGDGAGKSTQVEALAEWVRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + HE+ R FL +A Sbjct: 628 WATDGLVPHLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHERVRAGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 R +VD+A ++V T Sbjct: 680 ADAGRYLVVDAAQDPEAVTT 699 >gi|291446581|ref|ZP_06585971.1| integral membrane protein with kinase activity [Streptomyces roseosporus NRRL 15998] gi|291349528|gb|EFE76432.1| integral membrane protein with kinase activity [Streptomyces roseosporus NRRL 15998] Length = 1070 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 557 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD VD R R + D E + HE+ R FL +A Sbjct: 617 WATSGLVPHLTVLLD--VDPATARE------RFTEAPDRLESEPAEFHERVRSGFLTLAA 668 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ +S+ T Sbjct: 669 ADPTRYLVVDAGQEPESITT 688 >gi|225024056|ref|ZP_03713248.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC 23834] gi|224943081|gb|EEG24290.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC 23834] Length = 205 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 109/188 (57%), Gaps = 7/188 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGKTT +++++ + + V TREPGGTP EA R +LL+ + G Sbjct: 5 FITLDGIDGAGKTTQLAVIREWFAAQERPVLFTREPGGTPLGEALRRLLLNPKT-QAGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR H+E+VI PAL + ++ DRF D+++AYQG + L++ Sbjct: 64 AETLLMFAARAQHIESVILPALEDDVSVVSDRFTDATFAYQGGGRGLPEADIAQLEQWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P TI+LD+P+++ L R++ S D FE+++ + RQ +L+ A P Sbjct: 124 GNLRPSLTILLDVPLEVSLARIER------SRNKDRFEQEEADFFTRVRQSYLERAAAAP 177 Query: 186 DRCHIVDS 193 +R +++S Sbjct: 178 ERYTVINS 185 >gi|218294864|ref|ZP_03495718.1| dTMP kinase [Thermus aquaticus Y51MC23] gi|218244772|gb|EED11296.1| dTMP kinase [Thermus aquaticus Y51MC23] Length = 201 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 115/205 (56%), Gaps = 17/205 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG++G+GK+T LL FL+ + V +TREPGG R +LL+ Sbjct: 2 AGLFLTLEGLDGSGKSTQAKLLAAFLEGRGLPVVLTREPGG--GLPGVRDLLLNPLKGPL 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++ +A R +HV VI P+L G ++ DR+LDSS AYQG + L L L E Sbjct: 60 SPEAEYLLLSADRAEHVRKVILPSLEAGAWVVSDRYLDSSLAYQG---FGRGLPLPWLLE 116 Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ + + P T +LDLP + L+RV++ D ER+ + ++ R+ +L Sbjct: 117 VAKEATLGLTPRLTFLLDLPPEEALRRVKDP---------DRLEREGLAFFQRVREGYLF 167 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A+ +P R ++D+ S ++VA I Sbjct: 168 LAKEEPHRFVVLDATESVEAVAQRI 192 >gi|294340171|emb|CAZ88543.1| putative thymidylate kinase [Thiomonas sp. 3As] Length = 215 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 114/211 (54%), Gaps = 9/211 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFIS EGI+GAGK+T + + L+ N V +TREPGGT E R +LL + Sbjct: 10 GLFISLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLH---ETMR 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++ AAR +HV VI PAL+ G ++CDRF ++ AYQG L++L Sbjct: 67 PATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALARW 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PDC I++D+P ++ +R L ++ D FE++ V + R +L A + Sbjct: 127 VHPGLCPDCIILIDVPPEVAAQR------LEQTRQRDRFEQESVDFFARVRANYLQQAAS 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P++ ++D + ++V I + +++Q+ Sbjct: 181 SPEKWRVIDGTQTPEAVQKTITGYLNKVLQE 211 >gi|254733599|ref|ZP_05191318.1| thymidylate kinase [Bacillus anthracis str. Western North America USA6153] Length = 207 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADPPMEKLIEEVIQVI 203 >gi|254172680|ref|ZP_04879355.1| thymidylate kinase [Thermococcus sp. AM4] gi|214033609|gb|EEB74436.1| thymidylate kinase [Thermococcus sp. AM4] Length = 227 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 18/211 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G+F+ EGI+GAGK+T LL ++ +RK Y+V +T+EP T + R ++L+ G + Sbjct: 21 GIFVVIEGIDGAGKSTQAKLLAKWFERKGYEVVLTKEPTDTAFGKLIRKLVLTGGREGII 80 Query: 63 -GA----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 GA EAEA++FAA R +HV +IRPAL GK+++ DR+ SS AYQ R + Sbjct: 81 DGARISHEAEALLFAADRAEHVHKLIRPALESGKVVISDRYFYSSLAYQWARGLDLQWLI 140 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D L +V+ PD ++LDLPV ++R+ R E F+ K + + +K R+ + Sbjct: 141 D-LNRFAVR---PDLVVLLDLPVKESMRRINGRSIKTE------FD-KILELQKKVRENY 189 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L +A P+ IV++ +S + + +I+ +V Sbjct: 190 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLV 219 >gi|328883355|emb|CCA56594.1| Permeases of the major facilitator superfamily or Thymidylate kinase [Streptomyces venezuelae ATCC 10712] Length = 1162 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 66/200 (33%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 535 TGFFIALEGGDGAGKSTQVQALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 594 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++++RPAL G I+L DR++DSS AYQG + + Sbjct: 595 SNRAEALLYAADRAEHVDSLVRPALERGAIVLSDRYIDSSVAYQGAGRDLSPTEIARISR 654 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 655 WATDGLVPHLTVVLDVSPETARERF--------TEAPDRLESEPPEFHARVRAGFLALAA 706 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V T Sbjct: 707 ADPSRYLVVDAGQEPEAVTT 726 >gi|46199545|ref|YP_005212.1| thymidylate kinase [Thermus thermophilus HB27] gi|55981576|ref|YP_144873.1| thymidylate kinase [Thermus thermophilus HB8] gi|59798322|sp|Q72I89|KTHY_THET2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920831|sp|Q5SHX3|KTHY_THET8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46197171|gb|AAS81585.1| probable thymidylate kinase [Thermus thermophilus HB27] gi|55772989|dbj|BAD71430.1| probable thymidylate kinase (TMP kinase) [Thermus thermophilus HB8] Length = 198 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 75/205 (36%), Positives = 114/205 (55%), Gaps = 20/205 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG++G+GKTT L FL+ + V +TREPGG R +LL+ E Sbjct: 2 PGLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGG--GLPEVRSLLLT---QEL 56 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++F+A R +HV VI P L GK+++ DR+LDSS AYQG + L L L+E Sbjct: 57 SPEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQG---YGRGLPLPWLRE 113 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + P T +LDLP + L+RV+ L E L++F R R+ +L Sbjct: 114 VAREATRGLKPRLTFLLDLPPEAALRRVRRPDRL-EGLGLEFFRRV--------REGYLA 164 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +AR +P R ++D+ + +A I Sbjct: 165 LARAEPGRFVVLDATLPEEEIARAI 189 >gi|328956615|ref|YP_004374001.1| thymidylate kinase [Carnobacterium sp. 17-4] gi|328672939|gb|AEB28985.1| thymidylate kinase [Carnobacterium sp. 17-4] Length = 211 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 112/208 (53%), Gaps = 4/208 (1%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +GAGKT+ I L+ ++ D+ TREPGG+ AE R ++L+ E Sbjct: 3 GTFITIEGPDGAGKTSVIKKLIPMLVKAVQQDIVATREPGGSRIAEEIRELILNPTNTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R H+ I PAL GK+++CDRF+DSS AYQG + + + Sbjct: 63 DIRTEALLYAAGRRQHLVEKIIPALKAGKVVVCDRFVDSSLAYQGVARGIGISEVAEINQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + PD T+ LD+ GL+R+ +E+ D +++ + HEK R +L IA Sbjct: 123 FATENLSPDLTLYLDIEAHAGLERINLN---KENRQFDRLDQETLEFHEKVRSAYLKIAN 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +R +D++ ++V ++ E Sbjct: 180 EHTERIVQIDASQDLETVVEQCYQVIIE 207 >gi|94970254|ref|YP_592302.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345] gi|94552304|gb|ABF42228.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345] Length = 217 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F++FEG++G GK+T + +L L+R DV TREPGGTP E R V+L Sbjct: 6 GKFLTFEGLDGCGKSTQMEMLAEVLRRDGIDVVTTREPGGTPTGEKIRSVILDSKTRFLH 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 AE + AAR H+ +++P+L G+ +LCDRF DSS AYQ G R L LD + + Sbjct: 66 PMAELALMFAARAQHIAEIVQPSLEAGRWVLCDRFTDSSEAYQGGGRQMGSQLILD-MHK 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDI 180 I ++ P+ TI++D + + R + R + +D FER+ + ++ R + I Sbjct: 125 IVCGDLWPEMTILMDSDPEASVARARRRNRANATDGVDENRFEREKIEFFQRVRDAYNAI 184 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A +P R + VD+ S I+ V E Sbjct: 185 ADREPQRVYKVDARRSKDVTHPEIVRAVRE 214 >gi|297627199|ref|YP_003688962.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922964|emb|CBL57546.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 212 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 106/203 (52%), Gaps = 13/203 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F+ FEG +G GK+T + LL L VTREPGGTP + R +LL + Sbjct: 8 GWFVVFEGGDGVGKSTQVELLADALADAGVSHLVTREPGGTPLGDNIRELLLDPASGDVA 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA + H+ V+ PAL GK+++CDR+LDS AYQG + + + + Sbjct: 68 PRAEALLYAADKAQHLHEVVVPALAAGKVVVCDRYLDSMLAYQGAGRVLELREVADIADW 127 Query: 124 SVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T++LDL D +G+K ++R E+ V H + RQ FLD+A Sbjct: 128 ATRGLRPDLTVLLDLDPDEAVGMKEHKDR-----------LEQAGVEFHRRVRQGFLDLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 P+R ++ + A + Sbjct: 177 NADPERYLVLPGRQGREWAAGRV 199 >gi|62185123|ref|YP_219908.1| thymidylate kinase [Chlamydophila abortus S26/3] gi|73920816|sp|Q5L5Y4|KTHY_CHLAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|62148190|emb|CAH63947.1| thymidylate kinase [Chlamydophila abortus S26/3] Length = 211 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + V TREPGG+ E R +L E Sbjct: 1 MFIVIEGCEGSGKSSLTQLLKDKLMAEGKAVVATREPGGSSLGERVRDWILDPSTTELSP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 E +F AAR H+ I PAL GKI++CDRF DS+ YQG ++ +L Sbjct: 61 YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++++P+ T +LD+P D GLKR Q + S D FE + + H K R+ FL +A Sbjct: 121 VGQKKILPNLTCLLDIPADEGLKRKQQQKS------FDKFENQSLAYHTKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ D ++D+ + ++ EL Sbjct: 175 SRLDSYLVLDARQPIEESLNKVMTAYTEL 203 >gi|294630603|ref|ZP_06709163.1| thymidylate kinase [Streptomyces sp. e14] gi|292833936|gb|EFF92285.1| thymidylate kinase [Streptomyces sp. e14] Length = 822 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 8/201 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 SSGFFIALEGGDGAGKSTQAEALADWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSQG 567 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 LSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 627 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 RWATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHARVRAGFLALA 679 Query: 182 RNQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V T Sbjct: 680 AADPGRYLVVDAGQEPEAVTT 700 >gi|315221919|ref|ZP_07863830.1| thymidylate kinase [Streptococcus anginosus F0211] gi|315188885|gb|EFU22589.1| thymidylate kinase [Streptococcus anginosus F0211] Length = 212 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 112/213 (52%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FIS EG +GAGK++ + L L+ K TREPGG AE R V+L Sbjct: 1 MAKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ I PAL G+++L DRF+DSS AYQG + +D L Sbjct: 61 EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ +E D +R+ V H + R+ +L I Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAKS---KERGA-DRLDRESVEWHRRVREGYLSI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P+R +D++ + V + L ++ E V+ Sbjct: 177 LEKEPNRVRKIDASQPLEKVVADTLAVLAERVE 209 >gi|222093800|ref|YP_002527849.1| thymidylate kinase [Bacillus cereus Q1] gi|254808278|sp|B9IZB3|KTHY_BACCQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221237847|gb|ACM10557.1| thymidylate kinase [Bacillus cereus Q1] Length = 208 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL + ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNKDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|88798792|ref|ZP_01114375.1| Thymidylate kinase [Reinekea sp. MED297] gi|88778555|gb|EAR09747.1| Thymidylate kinase [Reinekea sp. MED297] Length = 206 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 109/206 (52%), Gaps = 6/206 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 S FI+ EG+EGAGKTT +L +L + TREPGGTP AE R ++L+ + Sbjct: 2 SAQFITIEGLEGAGKTTQAEVLCNWLTDRGISFVRTREPGGTPIAEKIRDLVLAHHDERM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR HVE +I+PAL+ G+ ++ DRF D++YAYQG S ++ L++ Sbjct: 62 DPYTELLMVFAARQQHVETLIKPALVNGQWVVSDRFTDATYAYQGGGRSLGANYIQQLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T D GL R + R S LD E++ + + R + A Sbjct: 122 LVLGGFQPDTTFWFDCDAQTGLNRARARGS------LDRIEQEALSFFNRARAAYEQRAL 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 QP R +D++ + ++V+ ++ + Sbjct: 176 QQPQRFVRLDASQTVEAVSEQLIQAL 201 >gi|17232200|ref|NP_488748.1| thymidylate kinase [Nostoc sp. PCC 7120] gi|23821788|sp|Q8YN62|KTHY_ANASP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|17133845|dbj|BAB76407.1| thymidylate kinase [Nostoc sp. PCC 7120] Length = 211 Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG+EG GKT+ + L +LQ V +TREPGGT R +LL D+ Sbjct: 2 GGRFIVFEGVEGCGKTSQMQLCAEWLQSLGISVVLTREPGGTELGLDLRRLLLQKAEDKP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E +++AA R HV ++P L +GK +LCDR++DS+ AYQG + + L Sbjct: 62 IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +I+ + D TI LD+ V++GL R + ++ LD E++ + H + +Q + D+A Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----DNVGLDRIEQETIAFHRRVQQGYADLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + P R VD S ++V I I+ Sbjct: 177 ASSPKRIIRVDGQLSKETVHKTIQEIL 203 >gi|27469219|ref|NP_765856.1| dTMP kinase [Staphylococcus epidermidis ATCC 12228] gi|57866011|ref|YP_187716.1| thymidylate kinase [Staphylococcus epidermidis RP62A] gi|251809790|ref|ZP_04824263.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060] gi|282875412|ref|ZP_06284284.1| dTMP kinase [Staphylococcus epidermidis SK135] gi|293366124|ref|ZP_06612811.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258101|sp|Q8CQT7|KTHY_STAES RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920830|sp|Q5HRS3|KTHY_STAEQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|27316768|gb|AAO05943.1|AE016751_238 dTMP kinase [Staphylococcus epidermidis ATCC 12228] gi|57636669|gb|AAW53457.1| thymidylate kinase [Staphylococcus epidermidis RP62A] gi|251806658|gb|EES59315.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060] gi|281295769|gb|EFA88291.1| dTMP kinase [Staphylococcus epidermidis SK135] gi|291319718|gb|EFE60077.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)] gi|329723942|gb|EGG60467.1| dTMP kinase [Staphylococcus epidermidis VCU144] gi|329733036|gb|EGG69375.1| dTMP kinase [Staphylococcus epidermidis VCU028] gi|329737878|gb|EGG74106.1| dTMP kinase [Staphylococcus epidermidis VCU045] Length = 203 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 12/197 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI+FEG EGAGKT S++K+ +R K YD+ TREPGG +E R ++L D Sbjct: 4 FITFEGPEGAGKT---SVIKKVSERLAKEYDIVTTREPGGVLTSEEIRRIVLDG--DSID 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA+R +H+ I P+L GKI+LCDR++DSS AYQG + L E Sbjct: 59 IRTEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEF 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD TI LD+ +IG +R+ L+ + + ++++ HEK + + + + Sbjct: 119 AINGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEEKAFHEKVIEGYQKVISD 173 Query: 184 QPDRCHIVDSAHSFQSV 200 P R V++ HS V Sbjct: 174 NPHRFIKVNANHSLDKV 190 >gi|312869713|ref|ZP_07729860.1| dTMP kinase [Lactobacillus oris PB013-T2-3] gi|311094762|gb|EFQ53059.1| dTMP kinase [Lactobacillus oris PB013-T2-3] Length = 218 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 6/207 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ + +++ L Q V TREPGG +E R VL S + Sbjct: 7 GKFISFEGPDGAGKTSVLRAIQQQLVDQLGADRVMYTREPGGNHISEQIRQVLFSPENTD 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDR++DSS AYQG + + Sbjct: 67 MDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRHLGEQVIWQMN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ ++PD TI LD+ ++GL+R+ + ++ + + + H+ R +L + Sbjct: 127 QFAIDGLLPDLTIYLDVESEVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRLY 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + PDR ++D+ V + + Sbjct: 183 QAHPDRIKLIDAGQPLDQVIAAVAQTI 209 >gi|304390265|ref|ZP_07372219.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657530|ref|ZP_07910412.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304326747|gb|EFL93991.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492002|gb|EFU81611.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 239 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 6/201 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEG +G GKTT I+ +++ + +DV TREPGGT A R +LL G + Sbjct: 31 GLFVAFEGCDGVGKTTQITRAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DVS 88 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++FAA R HV +I PA+ +GK+++ DR+L SS AYQG + L Sbjct: 89 PRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSLW 148 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++P+ T++LDL ++ +R SL D ER + ++ R+ FL ++ Sbjct: 149 ATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSEG 205 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 Q D +VD++ +AT + Sbjct: 206 Q-DTWLVVDASLPVAEIATQV 225 >gi|264677746|ref|YP_003277652.1| thymidylate kinase [Comamonas testosteroni CNB-2] gi|262208258|gb|ACY32356.1| thymidylate kinase [Comamonas testosteroni CNB-2] Length = 229 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 77/226 (34%), Positives = 114/226 (50%), Gaps = 33/226 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ GLFISFEGI+GAGK++HI L + + + V +TREPGGTP AE R ++L +D Sbjct: 5 LSKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLHDAMD 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++ AAR DH+ VI PAL G++++ DRF D+++AYQG SL Sbjct: 65 PL---TEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGF------SL 115 Query: 121 QEISVQEVM------------------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 +++S E M PD T+ DLP ++ +R L + D F Sbjct: 116 EQLSALERMAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAER------LATARVPDRF 169 Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 E + + Q + + AR P R +D+ S +V I V Sbjct: 170 EAQPGEFFARVAQGYAERARTAPQRFVRIDAHASRHAVWQQITQAV 215 >gi|118475802|ref|YP_892953.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam] gi|196047361|ref|ZP_03114574.1| thymidylate kinase [Bacillus cereus 03BB108] gi|225862082|ref|YP_002747460.1| thymidylate kinase [Bacillus cereus 03BB102] gi|229182425|ref|ZP_04309677.1| Thymidylate kinase [Bacillus cereus BGSC 6E1] gi|166221719|sp|A0R8A3|KTHY_BACAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808277|sp|C1ES32|KTHY_BACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118415027|gb|ABK83446.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam] gi|196021763|gb|EDX60457.1| thymidylate kinase [Bacillus cereus 03BB108] gi|225787947|gb|ACO28164.1| dTMP kinase [Bacillus cereus 03BB102] gi|228601005|gb|EEK58573.1| Thymidylate kinase [Bacillus cereus BGSC 6E1] Length = 208 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL + ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNDDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD +D+ H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EDISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|239637468|ref|ZP_04678442.1| thymidylate kinase [Staphylococcus warneri L37603] gi|239596913|gb|EEQ79436.1| thymidylate kinase [Staphylococcus warneri L37603] Length = 203 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 71/195 (36%), Positives = 113/195 (57%), Gaps = 8/195 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT + + L ++YDV TREPGG P E R V+L ++ Sbjct: 4 FITFEGPEGSGKTTVLKAVAEKLA-QHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL +I+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVMPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ + + R+ LD ++D+ HEK + + + N+P Sbjct: 121 NGLYPDLTIYLDVSAEVGRERILS--NQRDQNRLD---QEDIDFHEKVIEGYHRVIHNEP 175 Query: 186 DRCHIVDSAHSFQSV 200 +R +D+ S V Sbjct: 176 ERFVQIDADQSIDKV 190 >gi|241889540|ref|ZP_04776839.1| thymidylate kinase [Gemella haemolysans ATCC 10379] gi|241863847|gb|EER68230.1| thymidylate kinase [Gemella haemolysans ATCC 10379] Length = 208 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 119/209 (56%), Gaps = 15/209 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG +G+GKT+ I+ +L+ K Y V TREPGGT +E R +L D Sbjct: 3 GKFITVEGSDGSGKTSFINFATEYLKEKGYKVITTREPGGTEFSEKVRELLFDSSND-ID 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121 A+ E+++F A+R DH+ I P + +G I++CDRF+DSS AYQ G S Q + ++ Sbjct: 62 AKTESLLFCASRRDHIVKKILPHVNDGYIVICDRFVDSSVAYQSYGRGLSKQDIL--NIN 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + PD T+ + V++GL R +NR + + LD++ K+V ++ + D Sbjct: 120 SYATDNLEPDLTLYFCVDVEVGLARTKNRDDNNRMDQESLDFY--KNV------KRGYDD 171 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++R +R ++D++ ++++V L I+ Sbjct: 172 LSRENTERIKVIDASDTYENVQKKALAIL 200 >gi|225026353|ref|ZP_03715545.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353] gi|224956363|gb|EEG37572.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353] Length = 209 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/215 (34%), Positives = 115/215 (53%), Gaps = 13/215 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI EG +G+GKTT I+LLK +L+ Y+ +TREPGGT E R ++L+ E Sbjct: 3 GLFIVMEGPDGSGKTTQINLLKEYLEEAGYECLITREPGGTVIGEEIRQLILNPEHKEMS 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AA+R V VI PAL EGKI++ DRF+DSS YQG ++ L + ++ + Sbjct: 63 PVTEMLLYAASRAQLVHEVIGPALEEGKIVISDRFVDSSIVYQG---IARKLGISTVSAV 119 Query: 124 SVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD +DL GL+R +E LD E++ + H + + + Sbjct: 120 NAPGIGIYRPDGIFFIDLSEAEGLRRK------KEQKNLDRMEQEGIDFHHMVSEGYRKV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+ I D S ++ I N V EL++K+ Sbjct: 174 LSGRPEVMKI-DGGRSIDTIQKKIRNHVDELLKKK 207 >gi|89901037|ref|YP_523508.1| thymidylate kinase [Rhodoferax ferrireducens T118] gi|122479112|sp|Q21W76|KTHY_RHOFD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|89345774|gb|ABD69977.1| thymidylate kinase [Rhodoferax ferrireducens T118] Length = 215 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FISFEGI+GAGK+THI L + + + V +TREPGGTP AE R ++L+ +D Sbjct: 3 TEGIFISFEGIDGAGKSTHIDALAQAFRAQGRAVTLTREPGGTPLAEKLRVLVLNDAMD- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++ AAR DH++ +I PAL G ++LCDRF D+++AYQG L L+ Sbjct: 62 --AMTEALLVFAARRDHLQQLIEPALARGDVVLCDRFTDATFAYQGAGRGFDLKILSFLE 119 Query: 122 EI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 S+Q + PD DL V L L + D FE + V + +L+ Sbjct: 120 RTVQSIQGLEPDFIRNPDLTVWFDLAAAIAAQRLAGARSPDKFEAQPVEFFRRVSDGYLN 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 P R +++ + ++V ++L+ V Sbjct: 180 RMTACPSRFARIEANQTREAVWQDVLHAV 208 >gi|241764588|ref|ZP_04762604.1| dTMP kinase [Acidovorax delafieldii 2AN] gi|241365951|gb|EER60577.1| dTMP kinase [Acidovorax delafieldii 2AN] Length = 225 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 76/200 (38%), Positives = 106/200 (53%), Gaps = 19/200 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEGI+GAGK++HI L + + V VTREPGGTP AE R ++L+ D Sbjct: 5 GLFITFEGIDGAGKSSHIEGLAEAFRAQGRTVTVTREPGGTPLAEKLRAMVLN---DPMD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E+++ AAR DH+ VI PAL G ++LCDRF D+++AYQG L L E+ Sbjct: 62 ALTESLLIFAARRDHLCQVIEPALARGDVVLCDRFTDATFAYQGAGRGFDLEVLSKL-EL 120 Query: 124 SVQEVM---------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 VQ + PD T+ DL +I +R+ + D FE + V + Sbjct: 121 MVQTGLAQEPGFMRNPDLTVWFDLAPEIAAQRLAG------ARVPDRFEAQPVEFFRRVA 174 Query: 175 QIFLDIARNQPDRCHIVDSA 194 Q + D A P R +D+A Sbjct: 175 QGYADRAATAPQRFARLDAA 194 >gi|298345977|ref|YP_003718664.1| dTMP kinase [Mobiluncus curtisii ATCC 43063] gi|298236038|gb|ADI67170.1| dTMP kinase [Mobiluncus curtisii ATCC 43063] Length = 239 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 111/201 (55%), Gaps = 6/201 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEG +G GKTT I+ +++ + +DV TREPGGT A R +LL G + Sbjct: 31 GLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DVS 88 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++FAA R HV +I PA+ +GK+++ DR+L SS AYQG + L Sbjct: 89 PRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSLW 148 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++P+ T++LDL ++ +R SL D ER + ++ R+ FL ++ Sbjct: 149 ATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSEG 205 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 Q D +VD++ +AT + Sbjct: 206 Q-DTWLVVDASLPVAEIATQV 225 >gi|306834090|ref|ZP_07467210.1| thymidylate kinase [Streptococcus bovis ATCC 700338] gi|304423663|gb|EFM26809.1| thymidylate kinase [Streptococcus bovis ATCC 700338] Length = 211 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIITTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDNKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIIRRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ +IGL R+ + + RE LD E+ D +H++ R+ +L + Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIA-KNAEREVNRLD-LEKLD--MHKRVREGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q R +D++ V + L+ + E + K Sbjct: 177 T-EQEKRIVTIDASRELAEVVSETLHTILEQLAK 209 >gi|300311913|ref|YP_003776005.1| thymidylate kinase [Herbaspirillum seropedicae SmR1] gi|300074698|gb|ADJ64097.1| thymidylate kinase protein [Herbaspirillum seropedicae SmR1] Length = 202 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 9/208 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG FI+FEGI+GAGK+THI + + L+ + V TREPGGT E R ++L Sbjct: 1 MASGKFITFEGIDGAGKSTHIPFVTQLLRDRGLTVVATREPGGTELGERLRELVLH---H 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ A+R +H+ VI PAL G ++ DRF D+++AYQG LD L Sbjct: 58 KMHLETEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQGGGRKLALDKLDRL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++ D+P+++ R L LD FE++ R +L Sbjct: 118 EQWVHPHLQPDLTLLFDVPLEVA------RARLDAERTLDKFEQEKADFFANTRAEYLRR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R ++DS + ++ IV Sbjct: 172 AAQFPHRFRLIDSTRPIAVIQEDLRAIV 199 >gi|318060890|ref|ZP_07979611.1| thymidylate kinase [Streptomyces sp. SA3_actG] Length = 1199 Score = 119 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 527 TGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 586 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G I++ DR++DSS AYQG + + + Sbjct: 587 SHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARISR 646 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LD+ + +R + D E + H + R FL +A Sbjct: 647 WATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 698 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P+R +VD A +SV + Sbjct: 699 AAPERYLVVDGAQEPESVTRTV 720 >gi|327438112|dbj|BAK14477.1| thymidylate kinase [Solibacillus silvestris StLB046] Length = 209 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 120/215 (55%), Gaps = 10/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI+FEG EGAGKT+ + + L+ + + +TREPGG AE R ++L Sbjct: 1 MQRNLFITFEGGEGAGKTSVLKAIGERLKEERIEALLTREPGGIEIAEKIRTIILDPAHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 E EA+++AAAR H I PAL EGK +LCDRF+DSS AYQG ++ + +D Sbjct: 61 EMHERTEALLYAAARAQHFYEKIVPALEEGKHVLCDRFIDSSLAYQG---YAREIGVDDV 117 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ E ++ + +PD TI ++ + GL R+ ++ R S ++ + + + H+K + + Sbjct: 118 LSINEFAIGKRLPDVTIFFNIAPERGLARI---HATR-SDEINRLDAEGLAFHQKVYEGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R P+R +V++ + + V + I+ L+ Sbjct: 174 EEAIRRYPERFKMVNADQALEQVIEEVWGILNPLL 208 >gi|187478259|ref|YP_786283.1| thymidylate kinase [Bordetella avium 197N] gi|115422845|emb|CAJ49373.1| thymidylate kinase [Bordetella avium 197N] Length = 214 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 108/197 (54%), Gaps = 9/197 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+TH + L LQ + +DV TREPGGTP E R +LL+ + G Sbjct: 12 GRFITLEGVDGAGKSTHTTWLVDTLQERGFDVVSTREPGGTPLGERLRELLLT---QDMG 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR +H+++VI PAL G ++CDR+ D++YAYQG + L++ Sbjct: 69 LDTETLLMFAARSEHLQHVIVPALARGAWVVCDRYTDATYAYQGGGRGLGAARVALLEQW 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T + D+P+ + R+ LD FE++ E+ R + A Sbjct: 129 LQPPLRPDLTWLFDVPLAVARARMAGERQ------LDRFEQEAEAFFERTRTAYHARAAA 182 Query: 184 QPDRCHIVDSAHSFQSV 200 +P R HI+D++ V Sbjct: 183 EPGRMHIIDASRPLDEV 199 >gi|163795500|ref|ZP_02189466.1| Thymidylate kinase [alpha proteobacterium BAL199] gi|159179099|gb|EDP63632.1| Thymidylate kinase [alpha proteobacterium BAL199] Length = 178 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 67/159 (42%), Positives = 94/159 (59%), Gaps = 6/159 (3%) Query: 37 VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +TREPGG+P AEA R +L++ + A EA++ AAR DH+ IRPAL +G+ ++CD Sbjct: 2 LTREPGGSPGAEAIRTLLVTGEPGRWDAVTEAMLMNAARRDHLIRTIRPALAKGQWVICD 61 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 RF+DS+ AYQG L++L E +V++ PD T++LDL + GL R +LR S Sbjct: 62 RFIDSTLAYQGYAGGVPLATLEALIEAAVEDTRPDLTLVLDLAPETGLAR-----TLRGS 116 Query: 157 ACLDY-FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 + FERK + H R FL IA DRC VD+ Sbjct: 117 DGTEARFERKGLAFHAAVRDGFLRIATANLDRCVTVDAG 155 >gi|113475256|ref|YP_721317.1| thymidylate kinase [Trichodesmium erythraeum IMS101] gi|123352459|sp|Q115I0|KTHY_TRIEI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110166304|gb|ABG50844.1| thymidylate kinase [Trichodesmium erythraeum IMS101] Length = 225 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 21/195 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-------------NYDVHVTREPGGTPAAEAA 50 G FI FEG+EG GKTT I LL+ +L + +V +TREPGGT +A Sbjct: 3 GKFIVFEGVEGGGKTTQIELLQDWLLETGESRQILPKSIDLDLEVVITREPGGTKLGKAL 62 Query: 51 RHVLLSCGV--DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 R +LLS V ++ +E +++AA R H+E +I+P L G I+LCDRF+DS+ AYQG Sbjct: 63 RELLLSPDVLAEKIQETSELLLYAADRAQHIEALIKPCLERGTIVLCDRFIDSTIAYQGY 122 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + L I+ + D T LD+ V+IGL R ++R D E+ ++ Sbjct: 123 GRGLDVELIKQLNYIATGGLKSDLTFWLDIDVEIGLARAKSR------GNFDRMEQANIE 176 Query: 169 IHEKRRQIFLDIARN 183 H + +Q + ++A+N Sbjct: 177 FHRRVQQGYQELAKN 191 >gi|15672380|ref|NP_266554.1| thymidylate kinase [Lactococcus lactis subsp. lactis Il1403] gi|14285511|sp|Q9CIG4|KTHY_LACLA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12723271|gb|AAK04496.1|AE006276_11 thymidylate kinase [Lactococcus lactis subsp. lactis Il1403] gi|326405974|gb|ADZ63045.1| thymidylate kinase [Lactococcus lactis subsp. lactis CV56] Length = 211 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 117/207 (56%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ ++ TREPGG AE R ++L + Sbjct: 2 NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTDI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++FAAAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ D+ D+ L+R+ +NR E LD ER + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKNRAD--EVNRLD-LERAE--MHRKVREGYLEIV 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D++ + V + L+++ Sbjct: 177 VKEPERFVKIDASQPLEKVVADTLSVL 203 >gi|39938716|ref|NP_950482.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|59798379|sp|Q7WSH2|KTHY_ONYPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33563105|dbj|BAC81721.1| thymidylate kinase [Onion yellows phytoplasma] gi|39721825|dbj|BAD04315.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 207 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 119/205 (58%), Gaps = 11/205 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKTTH L L +K Y +T+EPGG E R++LL + Sbjct: 1 MFISFEGCEGTGKTTHSRYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSSNKQIDF 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA R +H+ +I PAL + KI++CDR+LDS+ AYQ F+ ++ + Sbjct: 60 HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSQDFVLNINNFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA-RN 183 + + P+ T LDL IG++RV+ ++ +E ++ F+ + + H+K R+ +LD+ ++ Sbjct: 120 LNYI-PNITFYLDLDPKIGIQRVK-QFRPKE---INSFDLQKLSFHKKVRKGYLDLCQKD 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 Q R ++D++ + NI NI+ Sbjct: 175 QQKRIFLIDASKPLE----NIYNII 195 >gi|309801867|ref|ZP_07695984.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022] gi|308221519|gb|EFO77814.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022] Length = 246 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 33/223 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 6 GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 65 Query: 58 GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 GV A+ EA++FAA R HV VIRPAL G +++ DR+LDSS A Sbjct: 66 GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 125 Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 YQ + L L ++++S+ ++P+ T +LD+ R+++ ESA D+ Sbjct: 126 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 182 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 R R FL++AR++P+R ++D++ S + V I Sbjct: 183 QNRT--------RNAFLELARDEPERFRVIDASQSIEEVWQRI 217 >gi|289551719|ref|YP_003472623.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01] gi|315660351|ref|ZP_07913204.1| thymidylate kinase [Staphylococcus lugdunensis M23590] gi|289181250|gb|ADC88495.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01] gi|315494640|gb|EFU82982.1| thymidylate kinase [Staphylococcus lugdunensis M23590] Length = 205 Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I + L +++DV TREPGG P E R V+L + Sbjct: 4 FITFEGPEGSGKTTVIQAVAEKLA-QDFDVISTREPGGVPTGEEIRKVVLDG--NHMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + L + ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALKQHKIVLCDRYIDSSLAYQGYARGIGIEEVRKLNDFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ +IG +R+ N + RE LD ++D+ H + + I N Sbjct: 121 NGLYPDLTIYLDISAEIGRQRIMN--NQREQNRLD---KEDLKFHNLVIEGYRQIMENGD 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R VD++ + +V I+ ++K Sbjct: 176 KRFRKVDASQNIANVIEETYQIIINFLKK 204 >gi|307298997|ref|ZP_07578799.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915422|gb|EFN45807.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2] Length = 209 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 7/211 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FIS EGI+G GKTT I LL +L + + + + REPGGT A E R +LL F + Sbjct: 1 MFISVEGIDGCGKTTQIKLLAEYLSQLDVEFIIVREPGGTKAGEEIRDILLHKEYHLF-S 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E+E ++F AAR V VIRP L +GK ++ DRF+DSS AYQG + ++ + Sbjct: 60 ESELLLFMAARAQIVREVIRPELEKGKTVIADRFMDSSVAYQGVGRRLGREIVQAMNAFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V +PD T +D+P D+ + R +R+ D E ++ E+ R+ + + Sbjct: 120 VGGTVPDITFYIDVPTDVAISR------MRKEKKNDKIEMENFDFFERVREGYEKLMVEN 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +R +D S + V T+I + L K+ Sbjct: 174 RERFVRIDGKQSEEKVQTDIRKSLRVLFHKK 204 >gi|296135948|ref|YP_003643190.1| thymidylate kinase [Thiomonas intermedia K12] gi|295796070|gb|ADG30860.1| thymidylate kinase [Thiomonas intermedia K12] Length = 215 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 114/211 (54%), Gaps = 9/211 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+S EGI+GAGK+T + + L+ N V +TREPGGT E R +LL Sbjct: 10 GLFVSLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLH---QTMR 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++ AAR +HV VI PAL+ G ++CDRF ++ AYQG L++L Sbjct: 67 PATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALARW 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PDC I++D+P ++ +R L ++ D FE++ V + R +L A + Sbjct: 127 VHPGLCPDCIILIDVPPEVAAQR------LAQTRQRDRFEQESVDFFARVRANYLQQAAS 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P++ ++D + ++V I + + +++Q+ Sbjct: 181 APEKWRVIDGTQTPEAVQKTITDYLKKVLQE 211 >gi|302520927|ref|ZP_07273269.1| thymidylate kinase [Streptomyces sp. SPB78] gi|302429822|gb|EFL01638.1| thymidylate kinase [Streptomyces sp. SPB78] Length = 1202 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 526 TGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 585 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G I++ DR++DSS AYQG + + + Sbjct: 586 SHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARISR 645 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LD+ + +R + D E + H + R FL +A Sbjct: 646 WATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 697 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P+R +VD A +SV + Sbjct: 698 AAPERYLVVDGAQEPESVTRTV 719 >gi|294813363|ref|ZP_06772006.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064] gi|326441702|ref|ZP_08216436.1| thymidylate kinase [Streptomyces clavuligerus ATCC 27064] gi|294325962|gb|EFG07605.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064] Length = 1131 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 535 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 594 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV +V+RPAL G +++ DR++DSS AYQG + + Sbjct: 595 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 654 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 655 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 706 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V T Sbjct: 707 GDPARYLVVDAGQEPEAVTT 726 >gi|239929816|ref|ZP_04686769.1| integral membrane protein with kinase activity [Streptomyces ghanaensis ATCC 14672] gi|291438148|ref|ZP_06577538.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672] gi|291341043|gb|EFE67999.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672] Length = 966 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 507 SGFFIALEGGDGAGKSTQAEALAEWIRSKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 566 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +H++ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 567 SHRAEALLYAADRAEHIDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARINR 626 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 627 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 678 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P R +VD+ ++V T I Sbjct: 679 ADPGRYLVVDAGQEPEAVTTVI 700 >gi|145638629|ref|ZP_01794238.1| thymidylate kinase [Haemophilus influenzae PittII] gi|145272224|gb|EDK12132.1| thymidylate kinase [Haemophilus influenzae PittII] gi|309750128|gb|ADO80112.1| Thymidylate kinase [Haemophilus influenzae R2866] Length = 219 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 115/206 (55%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 12 GKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKYETEEPV 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 72 TAKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD TI LD+ +GL R + R LD E+ D+ + R +L + + Sbjct: 132 TVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 185 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210 >gi|306823747|ref|ZP_07457121.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679] gi|304552745|gb|EFM40658.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679] Length = 245 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 33/223 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 5 GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 64 Query: 58 GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 GV A+ EA++FAA R HV VIRPAL G +++ DR+LDSS A Sbjct: 65 GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 124 Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 YQ + L L ++++S+ ++P+ T +LD+ R+++ ESA D+ Sbjct: 125 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 181 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 R R FL++AR++P+R ++D++ S + V I Sbjct: 182 QNRT--------RNAFLELARDEPERFRVIDASQSIEEVWQRI 216 >gi|119503325|ref|ZP_01625409.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080] gi|119460971|gb|EAW42062.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080] Length = 215 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 6/212 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG EG GKTT + L++ L+ + VTREPGGT E R +LL Sbjct: 10 FITVEGGEGVGKTTQLRLIEARLREAGIPLLVTREPGGTELGEQLRQLLLQKEGLAPTPM 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR HV+ VI PAL G+ +LCDRF D+S+AYQG + L E++ Sbjct: 70 AELLMVFAARAQHVDTVIAPALQRGEWVLCDRFTDASFAYQGFGRGLPLGAIQQLAELAH 129 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P+ +I+LD+ ++GL+R + R LD FE + + E R +L + +P Sbjct: 130 PHINPNLSILLDVDPEVGLERARARGE------LDRFELETIPFFEAVRNGYLQRVKLEP 183 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R ++D+ + + V + + + E + +S Sbjct: 184 HRWRVIDAGVALEQVEQQLGDCLKEWIADAIS 215 >gi|293374639|ref|ZP_06620954.1| dTMP kinase [Turicibacter sanguinis PC909] gi|292646729|gb|EFF64724.1| dTMP kinase [Turicibacter sanguinis PC909] Length = 222 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG FI+ EG EGAGKTT + L + L + TREPGG AE R V+L Sbjct: 13 MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + EA+++AAAR H+ ++PA+ GKI+LCDRF+DSS YQG ++ + +D + Sbjct: 73 EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQG---YARGIGMDEV 129 Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +EI +++ MPD TI D+ + GL R+ S RE LD + + H+ + + Sbjct: 130 REINQFAIEGFMPDMTIFFDIKPEDGLARIAAN-SGREVNRLDL---EGLEFHQLVYEGY 185 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A +R VD+ S Q+V I ++ E + K Sbjct: 186 KIQANLFSERIVTVDATQSIQAVTNEICQLILEKLGK 222 >gi|15835078|ref|NP_296837.1| thymidylate kinase [Chlamydia muridarum Nigg] gi|270285245|ref|ZP_06194639.1| thymidylate kinase [Chlamydia muridarum Nigg] gi|270289264|ref|ZP_06195566.1| thymidylate kinase [Chlamydia muridarum Weiss] gi|301336641|ref|ZP_07224843.1| thymidylate kinase [Chlamydia muridarum MopnTet14] gi|13629246|sp|Q9PKK5|KTHY_CHLMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|7190503|gb|AAF39311.1| thymidylate kinase [Chlamydia muridarum Nigg] Length = 203 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 101/191 (52%), Gaps = 9/191 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT L + L + +V +TREPGG+ E R ++L E + Sbjct: 1 MFIVVEGGEGAGKTQFTQALSKRLMEEGKEVVLTREPGGSALGEQLRDLVLDV-TQEISS 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 AE ++F AAR H++ I PAL GK ++CDRF DS+ YQG F+ L + Sbjct: 60 YAELLLFLAARAQHIQEKILPALESGKTVICDRFHDSTIVYQGIAGGLGEAFVTDLCYRV 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + +PD T +LDLP GL R + + LD FE+K H R+ F+ +A Sbjct: 120 VGDEPFLPDITFLLDLPEKEGLLRKTRQKN------LDRFEQKPTSFHRAAREGFISLAE 173 Query: 183 NQPDRCHIVDS 193 PDR I+D+ Sbjct: 174 RSPDRYKILDA 184 >gi|94310766|ref|YP_583976.1| thymidylate kinase [Cupriavidus metallidurans CH34] gi|254808302|sp|Q1LMB9|KTHY_RALME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|93354618|gb|ABF08707.1| thymidylate kinase (dTMP kinase) [Cupriavidus metallidurans CH34] Length = 200 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 110/208 (52%), Gaps = 16/208 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK+THI + L R +V TREPGGTP E R +LL + Sbjct: 3 GKFITFEGIDGAGKSTHIEWVAERL-RARANVVTTREPGGTPLGEDLRQLLLH---RKMH 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG + L LD +L Sbjct: 59 LETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQG---GGRGLALDRLATL 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++ D+P++ R+ RE D FE + E+ R +L Sbjct: 116 EQWVQSGLQPDLTLLFDVPLETASARLAG---AREP---DKFEAESRAFFERTRTEYLRR 169 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R ++D+ S + + I+ Sbjct: 170 AAEAPQRFRVIDATRSIDEIRVALEEII 197 >gi|24380041|ref|NP_721996.1| thymidylate kinase [Streptococcus mutans UA159] gi|290579980|ref|YP_003484372.1| putative thymidylate kinase [Streptococcus mutans NN2025] gi|46576564|sp|Q8DSU6|KTHY_STRMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|24378032|gb|AAN59302.1|AE014996_5 putative thymidylate kinase [Streptococcus mutans UA159] gi|254996879|dbj|BAH87480.1| putative thymidylate kinase [Streptococcus mutans NN2025] Length = 212 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G+FISFEG +GAGKTT + ++L + + +V TREPGG AE+ R ++L Sbjct: 1 MTKGIFISFEGPDGAGKTTVLEAILPQLKKLVAKEVITTREPGGVAIAESIRDLILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I P L +G ++L DRF+DSS AYQG + Sbjct: 61 TNMDDKTELLLYIAARRQHLVERILPELKKGNLVLVDRFIDSSVAYQGYGRGLDADAVTW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+ IGL R++ RE LD E+ D +H + R +L Sbjct: 121 LNNFATDGLQPDLTLYFDVDSQIGLTRIEKNKE-REVNRLD-LEQLD--MHRRVRSGYLK 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A+ PDR +D+A + V T+ L I+ Sbjct: 177 LAQENPDRIVTIDAARPLEEVITDALFII 205 >gi|152973878|ref|YP_001373395.1| thymidylate kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189028827|sp|A7GJU2|KTHY_BACCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|152022630|gb|ABS20400.1| dTMP kinase [Bacillus cytotoxicus NVH 391-98] Length = 208 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 10/208 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG EG+GK+T I+ L + + K V TREPGG +E R +L Sbjct: 3 GLFVTIEGPEGSGKSTLITKLLPYFENKGQKVIATREPGGIAISEEIRTILHKKEYTTME 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AAAR H+ + PAL +++LCDRF+DSS AYQG ++ L +D + E+ Sbjct: 63 ARTEALLYAAARRQHLVEKVMPALEADQLVLCDRFIDSSLAYQG---YARGLGIDKVYEM 119 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ MP TI LD+ ++GL R++ + + RE LD + + H R+ +L I Sbjct: 120 NRFATEDCMPSLTIYLDIAPEVGLARIE-KDAAREVNRLDM---ESIAFHRLVREGYLQI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 DR +V++ ++V ++ ++ Sbjct: 176 VERFKDRIVVVNADQPMENVVEEVIQLI 203 >gi|329769793|ref|ZP_08261194.1| thymidylate kinase [Gemella sanguinis M325] gi|328838155|gb|EGF87773.1| thymidylate kinase [Gemella sanguinis M325] Length = 208 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 118/206 (57%), Gaps = 9/206 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG +G+GKTT I+ L ++L+ K Y V TREPGGT +E R +L E Sbjct: 3 GKFITVEGSDGSGKTTFINFLTQYLKDKGYKVITTREPGGTEFSEKVRELLFDKTY-EID 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 A+ E+++F +R DH+ I P + +G I++CDRF+DSS AYQ R S+ +D + + Sbjct: 62 AKTESLLFCVSRRDHIIKKIIPYVEDGYIVICDRFVDSSIAYQSYGRGLSKQDIID-INK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ + V++GL R + R E+ +D+ +D+ ++ + + +++ Sbjct: 121 YATDGLEPDLTLYFKVDVEVGLSRTKGR---DENNRMDH---EDLSFYKSVKHGYDELSE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 +R +VD+ +++V + L IV Sbjct: 175 EYSNRIKVVDANQKYENVEKDALEIV 200 >gi|94987202|ref|YP_595135.1| thymidylate kinase [Lawsonia intracellularis PHE/MN1-00] gi|166221750|sp|Q1MQB3|KTHY_LAWIP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|94731451|emb|CAJ54814.1| Thymidylate kinase [Lawsonia intracellularis PHE/MN1-00] Length = 208 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63 +FI+ EGIEG+GKTT I+ L + + DV VTREPGG R ++LS E G Sbjct: 1 MFITIEGIEGSGKTTLINRLSEYFSSRGEDVIVTREPGGCELGGLLRSLVLS---SELGL 57 Query: 64 -AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE+E +F A R HV I+PA+M GK + CDR+ DS+ YQG L E Sbjct: 58 TAESELFLFLADRAQHVSECIQPAIMNGKTVFCDRYADSTIVYQGYGRGMNIGKLWEFNE 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ + P T++LD+ V+ L+R R +L + FE + + H + R FL A Sbjct: 118 VAIKGIWPQKTLLLDIDVEKALERACIRNEALGLNIVEGRFESEPMDFHNRIRDGFLHWA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR I+++ + + + ++++ E+V Sbjct: 178 GRNPDRITILNADTTPEDLFQQSVSVLREIV 208 >gi|149926477|ref|ZP_01914738.1| Thymidylate kinase [Limnobacter sp. MED105] gi|149824840|gb|EDM84054.1| Thymidylate kinase [Limnobacter sp. MED105] Length = 229 Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 69/202 (34%), Positives = 104/202 (51%), Gaps = 8/202 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G ISFEG++GAGK++HI+ +K L+ ++ TREPGGTP EA R ++L +D Sbjct: 20 GYLISFEGVDGAGKSSHIARVKARLEELGFECLQTREPGGTPVGEAIRELVLHHDMD--- 76 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR H+ I+PAL G ++ DRF DSS+AYQ + L + Sbjct: 77 VNTELLLMYAARRQHMVETIQPALDRGVWVITDRFEDSSFAYQAGAGGASWEDCQQLSKW 136 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ P T + DLP+ I R+Q R + D FE K E R F+ ++ Sbjct: 137 ALKGFEPTLTFLFDLPIAISQSRIQGR-----AGASDKFEEKPTGYFEAVRAGFIKRSQL 191 Query: 184 QPDRCHIVDSAHSFQSVATNIL 205 P R ++D+ S V +L Sbjct: 192 NPRRIRLIDAQPSESEVGETVL 213 >gi|194246765|ref|YP_002004404.1| Thymidylate kinase [Candidatus Phytoplasma mali] gi|193807122|emb|CAP18560.1| Thymidylate kinase [Candidatus Phytoplasma mali] Length = 208 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 120/214 (56%), Gaps = 7/214 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKT L++ L KNY +T+EPGG + + +LL+ + Sbjct: 1 MFISFEGCEGTGKTVLSKKLEKKLIEKNYLTILTKEPGGCLQTQPIKKILLNSSFKKLHC 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 E++++AA R++H+ +I P+L + KI++CDRFLDSS AYQG R+ + L Sbjct: 61 YTESLLYAADRIEHLNRIIIPSLQQKKIVICDRFLDSSVAYQGYGRNLGEELIYKI--NF 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +PD T +D+ IG++R++N R+ LD F+ + + HE+ R+ +L+I + Sbjct: 119 YALKYLPDITFYIDIDPFIGVQRIKN---FRKEK-LDNFDLEKMDFHERVREGYLNIFKK 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R ++D S +++ T I V + + +V Sbjct: 175 NKSRIILIDGNQSLENIFTIIYQKVIKFLNIKVK 208 >gi|21674136|ref|NP_662201.1| thymidylate kinase [Chlorobium tepidum TLS] gi|25453084|sp|Q8KCU7|KTHY_CHLTE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21647295|gb|AAM72543.1| thymidylate kinase [Chlorobium tepidum TLS] Length = 214 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ISFEGI+GAGK+T + LKR+LQ + +V REPGGTP AE R +LL D Sbjct: 1 MLISFEGIDGAGKSTQVMKLKRYLQERGREVLALREPGGTPVAEEIRELLLERRND-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122 E ++FAA+R + V+ VI+PAL ++ DRF DS+ AYQG + L LD L E Sbjct: 60 VGELLLFAASRAELVQQVIQPALENDSDVILDRFFDSTTAYQG---YGRGLDLDMLAEIN 116 Query: 123 -ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFL 178 I+ ++PD T LDL + L R + SL ES LD E + + + R+ + Sbjct: 117 RIASCRLVPDVTFYLDLTPEDALMRKFSEKSLPLAFESEELDRMENSGLDFYRRVREGYH 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I P+R I+D+ S + I++ + L K Sbjct: 177 KIGGENPNRIIIIDALLSPSEIHRKIISSIDALCTK 212 >gi|23097491|ref|NP_690957.1| thymidylate kinase [Oceanobacillus iheyensis HTE831] gi|46576586|sp|Q8EU53|KTHY_OCEIH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|22775714|dbj|BAC11992.1| thymidylate kinase [Oceanobacillus iheyensis HTE831] Length = 225 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 73/216 (33%), Positives = 120/216 (55%), Gaps = 10/216 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+FEG EGAGKTT I + + L + DV TREPGG +E R ++ E Sbjct: 2 AGLFITFEGGEGAGKTTVIQHIFQKLIAQGIDVIQTREPGGIKISEKIRSIIHDPEHLEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ + PAL +GK++LCDRF+DSS AYQG ++ L +D + Sbjct: 62 EERTEALLYAAARRQHLVEKVFPALEQGKVVLCDRFVDSSLAYQG---YARGLGIDEVYA 118 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I+ +Q+ MPD T+ D+ GL+R+ + RE LD +++ HE + + Sbjct: 119 INHFVIQDCMPDLTLFFDIEPKKGLERIAANKN-RERNRLDL---ENMQFHEAVYEGYQK 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + P+R + + + ++V + + I+ + ++ Sbjct: 175 VIARFPERIKTIQAEQALEAVEQDTMEIISSFLNEK 210 >gi|332173841|gb|AEE23095.1| thymidylate kinase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 209 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 8/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ G FI EG+EGAGK+T +S++K +++ + + TREPGGT AEA R + + Sbjct: 2 IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHRLICTREPGGTAMAEAIRECVKKDWQN 61 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EAE ++ AAR + NVI PAL GK +L DR SS AYQG + Sbjct: 62 ETVTTEAELLLMYAARAQLLHNVIHPALSSGKWVLGDRHDMSSQAYQGGGREIPQTLIQP 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L++I+++ +PD T+ LD+ +GL+R + R LD E+ D+ E+ R +L Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSVGLQRARGRGE------LDRIEQLDISFFERTRARYLS 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A Q D C ++++ +SV +I Sbjct: 176 LA-EQDDNCVVINTMQPIESVHHDI 199 >gi|289643672|ref|ZP_06475784.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] gi|289506505|gb|EFD27492.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] Length = 917 Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats. Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 7/154 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLFI+ EG EG+GK+T + L+ +L +V VTREPGGT R +LL Sbjct: 506 HAGLFIALEGGEGSGKSTQVERLRSWLASSGREVVVTREPGGTALGVKLRELLLDPAA-R 564 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R +HV VI PAL G I++ DRF+DSS AYQG + + L D + Sbjct: 565 LHPRTEALLYAADRAEHVSRVIEPALARGAIVVSDRFIDSSIAYQG---AGRQLGADDIA 621 Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYS 152 +S + ++PD TI+LD+P GL RV+ R S Sbjct: 622 MLSRWATRSLLPDVTILLDIPARTGLARVRARAS 655 >gi|77360743|ref|YP_340318.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125] gi|123588315|sp|Q3IHC1|KTHY_PSEHT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|76875654|emb|CAI86875.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125] Length = 208 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 111/203 (54%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG+EGAGK+T I+L + FL K D REPGGTP AE+ R ++ + +E E Sbjct: 5 FIVIEGLEGAGKSTAIALCQSFLNSKKIDFINVREPGGTPLAESLRTLVKAQHDEEIAFE 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR + NVI PAL +G+ +L DR SS AYQG L SL + + Sbjct: 65 TELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSSMVL 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + + PD TI LD+ IGL+R + R LD E++ + ++ R +L++A N Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELA-NDD 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 + VD+ S + V +I N++ Sbjct: 178 NSIKTVDANQSIEHVHRDITNVL 200 >gi|221068068|ref|ZP_03544173.1| dTMP kinase [Comamonas testosteroni KF-1] gi|220713091|gb|EED68459.1| dTMP kinase [Comamonas testosteroni KF-1] Length = 229 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 21/216 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + GLFISFEGI+GAGK++HI L + + + V +TREPGGTP AE R ++L +D Sbjct: 5 LPKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLHDAMD 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFL- 117 EA++ AAR DH+ VI PAL G++++ DRF D+++AYQG S + L + Sbjct: 65 PL---TEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSVL 121 Query: 118 -------DSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +LQ S + M PD T+ DLP ++ +R L + D FE + Sbjct: 122 ERMAQTGTALQAESSPDFMREPDMTLWFDLPAEVAAER------LTTARVPDRFEAQPGE 175 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + Q + + AR P R +D+ S +V I Sbjct: 176 FFARVAQGYAERARTAPQRFVRIDAHASRHAVWQQI 211 >gi|242241567|ref|ZP_04796012.1| dTMP kinase [Staphylococcus epidermidis W23144] gi|242234948|gb|EES37259.1| dTMP kinase [Staphylococcus epidermidis W23144] Length = 203 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 72/197 (36%), Positives = 111/197 (56%), Gaps = 12/197 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI+FEG EGAGKT S++K +R K YD+ TREPGG +E R ++L + Sbjct: 4 FITFEGPEGAGKT---SVIKEVSERLAKEYDIVTTREPGGVLTSEEIRRIVLDG--ESID 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA+R +H+ I P+L GKI+LCDR++DSS AYQG + L E Sbjct: 59 IRTEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEF 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD TI LD+ +IG +R+ L+ + + +++D + HEK + + + + Sbjct: 119 AINGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISD 173 Query: 184 QPDRCHIVDSAHSFQSV 200 P R V++ HS V Sbjct: 174 NPHRFIKVNANHSLDKV 190 >gi|170726335|ref|YP_001760361.1| thymidylate kinase [Shewanella woodyi ATCC 51908] gi|169811682|gb|ACA86266.1| dTMP kinase [Shewanella woodyi ATCC 51908] Length = 210 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 10/205 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63 FI EG+EGAGK++ ISL++ F+++ V V TREPGGTP AE R ++ ++ D Sbjct: 9 FIVIEGLEGAGKSSAISLVRDFIEKHTGAVPVCTREPGGTPLAERIRDLVKIADETDPLC 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++F AAR V NVI+PAL G+ +L DR SS AYQG L ++S+ Sbjct: 69 DEAECLLFYAARAQLVANVIKPALRRGEWVLGDRHNLSSLAYQGGGRGLSTL-VESVSRA 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD TI LD+ +GL R NR LD E +++ E+ R FL A+ Sbjct: 128 TLGDFKPDLTIYLDIEPKLGLTRAANRGE------LDRIEVEEIAFFERARHTFLSYAQ- 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 Q D ++D+ + V +I+ ++ Sbjct: 181 QDDSIQVIDAGQTMAEVHKDIVALL 205 >gi|301169177|emb|CBW28774.1| thymidylate kinase [Haemophilus influenzae 10810] Length = 219 Score = 118 bits (295), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 12 GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEPV 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 72 TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ + Sbjct: 132 TVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEKMDLDFFHRTRASYLELVK 185 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210 >gi|308234128|ref|ZP_07664865.1| thymidylate kinase [Atopobium vaginae DSM 15829] gi|328943647|ref|ZP_08241112.1| thymidylate kinase [Atopobium vaginae DSM 15829] gi|327491616|gb|EGF23390.1| thymidylate kinase [Atopobium vaginae DSM 15829] Length = 211 Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 9/203 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG++G GK+T + LL+ + +Y V REPGGT +EA R ++L Sbjct: 4 SGLFITLEGVDGCGKSTQVQLLRSCFEEASYKVSCLREPGGTSISEAIRALVLDPAYTSM 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 +E E +++ AAR V VI+PAL +G+I+LCDR+ DS+YAYQ G R ++ + L + Sbjct: 64 SSECELLLYEAARAQLVHEVIKPALAQGRIVLCDRYFDSTYAYQYGGRKLAEDMVLRA-N 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++P T +LD+ V R +D E++ + + ++ + +A Sbjct: 123 DLGSCGIVPHKTYVLDVDVACAYARATQ-------TSVDRLEQEGLAFQQDVQKAYKKLA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 QP R ++ + Q V + + Sbjct: 176 CLQPQRVTLISGEGTPQEVFSRL 198 >gi|290475848|ref|YP_003468740.1| thymidylate kinase [Xenorhabdus bovienii SS-2004] gi|289175173|emb|CBJ81976.1| thymidylate kinase [Xenorhabdus bovienii SS-2004] Length = 213 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 120/218 (55%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT I ++++ Q D+ TREPGGTP AE R L+ GV Sbjct: 1 MNSK-FIVIEGLEGAGKTTAIRTVVETLKQYGISDLIFTREPGGTPLAEKLRQ-LIKQGV 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +AE ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 59 EGESLTNKAEVLMLYAARVQLVENVIKPALEKGTWVVGDRHDLSSQAYQGGGRGIDQKLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL+E ++ + PD TI LDLP ++GL+R RE LD E++ + + R+ + Sbjct: 119 TSLRESALGDFYPDLTIYLDLPPEVGLQRA------RERGELDRIEKESLDFFHRTRERY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L++ Q D +D+ + V I + + ++++ Sbjct: 173 LELV-AQDDTIKKIDATQPLEKVQGAIRQTLLQWLKQQ 209 >gi|109898434|ref|YP_661689.1| thymidylate kinase [Pseudoalteromonas atlantica T6c] gi|109700715|gb|ABG40635.1| thymidylate kinase [Pseudoalteromonas atlantica T6c] Length = 209 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 112/205 (54%), Gaps = 8/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ G FI EG+EGAGK+T +S++K +++ + + TREPGGT AEA R + + Sbjct: 2 IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHSLTCTREPGGTAMAEAIRECVKKDWPN 61 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EAE ++ AAR + NVI PAL G +L DR SS AYQG + Sbjct: 62 ETVTTEAELLLMYAARAQLLHNVIHPALTSGSWVLGDRHDMSSQAYQGGGREIPQTLIQP 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L++I+++ +PD T+ LD+ IGL R + R LD E+ D+ E+ R +L Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSIGLARARGRGE------LDRIEQLDISFFERTRARYLS 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A Q + C ++D+ S + V +I Sbjct: 176 LA-EQDENCVVIDTMQSIEQVHHDI 199 >gi|156743649|ref|YP_001433778.1| dTMP kinase [Roseiflexus castenholzii DSM 13941] gi|189030839|sp|A7NQB4|KTHY_ROSCS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|156234977|gb|ABU59760.1| dTMP kinase [Roseiflexus castenholzii DSM 13941] Length = 229 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 7/211 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG EG+GK+T LL L + Y V +TREPGGT + R ++L E Sbjct: 3 LFVTFEGPEGSGKSTQARLLYESLYARRYPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+AAR V VIRP L +G I+LCDR+ DS+YAYQG L ++ + Sbjct: 63 TTETLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTYAYQGYGLGRDLAELRTITAAA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYS---LRESACLDY----FERKDVMIHEKRRQIF 177 + PD T LD+ + GL+R + ++ L +D + +++ H++ + Sbjct: 123 TGGLRPDITFYLDISAEDGLERKRRKHPGARLMGQRGVDQEWNRLDARELEYHQRVEAGY 182 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + P+R ++D+ S +++A I IV Sbjct: 183 RALIAQDPERWRVLDARQSIEALAEQIAAIV 213 >gi|167624300|ref|YP_001674594.1| thymidylate kinase [Shewanella halifaxensis HAW-EB4] gi|167354322|gb|ABZ76935.1| dTMP kinase [Shewanella halifaxensis HAW-EB4] Length = 212 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 118/211 (55%), Gaps = 10/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59 NS FI EG+EGAGK++ I+L++ F+++ V TREPGGTP AE R ++ ++ Sbjct: 7 NSAKFIVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKIANDS 66 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++F AAR V NVI+PAL G+ +L DR SS AYQG L + + Sbjct: 67 DPLCDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRGLMPL-VSA 125 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +++ PD T+ LD+ +GL+R R LD E++++ ++ R FL Sbjct: 126 ISDATLKGFKPDLTLYLDIAPKLGLERAARRGE------LDRIEQQEIEFFDRARATFLS 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A + D IVD++ S V +I+ I+ E Sbjct: 180 FA-DSDDTIKIVDASQSMAQVHKDIIAILQE 209 >gi|282863636|ref|ZP_06272694.1| thymidylate kinase [Streptomyces sp. ACTE] gi|282561337|gb|EFB66881.1| thymidylate kinase [Streptomyces sp. ACTE] Length = 1023 Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 506 TGFFLAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLSPTEIARISR 625 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 626 WATSGLVPHLTVLLDVDPETARERF--------TEAPDRLESEPPEFHNRVRSGFLTLAA 677 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+A +++ T Sbjct: 678 AAPLRYLVVDAAQEPEAITT 697 >gi|262283117|ref|ZP_06060884.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA] gi|262261369|gb|EEY80068.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA] Length = 212 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL +S EG +GAGK++ + L L+ K V TREPGG P +EA R V+L Sbjct: 1 MKRGLLVSLEGPDGAGKSSVLEALVPILEAKGQQVVTTREPGGVPISEAIREVILDQNNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG ++ L Sbjct: 61 EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ + RE LD + + +H++ RQ +L Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNKN-REVNRLDL---EGLEMHQRVRQGYLYS 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 P+R +D++ + + V + L ++ Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVL 204 >gi|253576904|ref|ZP_04854229.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843771|gb|EES71794.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 216 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 115/204 (56%), Gaps = 10/204 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +G+GKTT + ++R L+ + + TREPGG AE R V+L+ Sbjct: 7 GLFITLEGGDGSGKTTVMREMERLLKEQGVNFISTREPGGIEIAEKIREVILNPQHTAMD 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AA+R H+ + P+L G +LCDRFLDSS AYQG ++ L +D + +I Sbjct: 67 ARTEALLYAASRRQHLAEKVEPSLERGITVLCDRFLDSSLAYQG---YARGLGIDEVLKI 123 Query: 124 SV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T LD+ ++GL R+ RE LD + + H+K R+ + + Sbjct: 124 NLFATKGRFPDLTFYLDIEPEVGLARIAAGAG-REVNRLDM---ESLHFHQKVREGYQIL 179 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A P+R +D++ S + VA I Sbjct: 180 AGMYPERIKTIDASRSKEEVAAEI 203 >gi|145640425|ref|ZP_01796009.1| thymidylate kinase [Haemophilus influenzae R3021] gi|145275011|gb|EDK14873.1| thymidylate kinase [Haemophilus influenzae 22.4-21] Length = 210 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 63 TAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI LD+ +GL R + R LD E+ D+ + R +L + + Sbjct: 123 TVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 177 DNP-KAVVINAEQSIELVQADIESAV 201 >gi|297538533|ref|YP_003674302.1| thymidylate kinase [Methylotenera sp. 301] gi|297257880|gb|ADI29725.1| thymidylate kinase [Methylotenera sp. 301] Length = 212 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 5/217 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I +G GAGK+T + ++ L+ K YD +TREPGGT E R VLL Sbjct: 1 MNKGCMIVCDGGNGAGKSTVLRAIEEHLKTKQYDYVMTREPGGTVIGEKIREVLLCSDTP 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++FAAAR HV I P++ GK+++ DRF ++Y++Q + L Sbjct: 61 EMCDVTELMLFAAARAQHVREKIIPSINAGKVVVSDRFDSATYSFQHYGRGLSLALIQQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I++ D TI+LD+ GL+RV +R S LD E ++ K R +L+ Sbjct: 121 NNIALDGFKADVTIVLDIDPVKGLERVISRGS-----DLDRMEMANIEFLHKARNGYLEQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A+ P+R ++D++ S V ++ + +V ++ +++ Sbjct: 176 AKADPERFAVIDASQSLDVVISDAVKVVERVIARKLG 212 >gi|171058561|ref|YP_001790910.1| dTMP kinase [Leptothrix cholodnii SP-6] gi|170776006|gb|ACB34145.1| dTMP kinase [Leptothrix cholodnii SP-6] Length = 226 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 105/206 (50%), Gaps = 9/206 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EGI+GAGKT+H+ + + + +V TREPGGTP AEA R ++L +D Sbjct: 25 AGCFVTIEGIDGAGKTSHVQAIAERWRARGLEVVRTREPGGTPLAEALRELVLHQPMD-- 82 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++ AAR +H++ VI PAL G ++LCDRF D+++AYQG L L+ Sbjct: 83 -ALTEALLVFAARRNHLQEVIEPALARGAVVLCDRFTDATFAYQGGGRGFDTAVLAQLET 141 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD T+ DL ++ + D FER+ V R + D Sbjct: 142 WVQGSRQPDLTLWFDLGPEL------AAERRAAARAPDRFEREQVAFFHAVRLAYADRLA 195 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R +D+ + + VA L ++ Sbjct: 196 QAPQRVQRIDAGGTPEQVAARWLAVL 221 >gi|30995377|ref|NP_438617.2| thymidylate kinase [Haemophilus influenzae Rd KW20] gi|260580481|ref|ZP_05848309.1| thymidylate kinase [Haemophilus influenzae RdAW] gi|260092823|gb|EEW76758.1| thymidylate kinase [Haemophilus influenzae RdAW] Length = 219 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 12 GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 72 TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD TI LD+ +GL R + R LD E+ D+ + R +L++ + Sbjct: 132 TVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELVK 185 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210 >gi|319762329|ref|YP_004126266.1| thymidylate kinase [Alicycliphilus denitrificans BC] gi|317116890|gb|ADU99378.1| thymidylate kinase [Alicycliphilus denitrificans BC] Length = 218 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 17/208 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+FEGI+GAGK++HI L R L+ V +TREPGGTP AE R +LL+ +D Sbjct: 1 MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLNDAMD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E ++ AAR DH+ VI PAL G+ +LCDRF D+++AYQG L + Sbjct: 61 ---ALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117 Query: 121 QEISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ + PD T+ D+P ++ L + D FE + V + Sbjct: 118 ERLAQTGIGLGPDLMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + + D A P R +D A + V Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199 >gi|330825750|ref|YP_004389053.1| Thymidylate kinase [Alicycliphilus denitrificans K601] gi|329311122|gb|AEB85537.1| Thymidylate kinase [Alicycliphilus denitrificans K601] Length = 218 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 17/208 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+FEGI+GAGK++HI L R L+ V +TREPGGTP AE R +LL+ +D Sbjct: 1 MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLNDAMD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E ++ AAR DH+ VI PAL G+ +LCDRF D+++AYQG L + Sbjct: 61 ---ALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117 Query: 121 QEISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ + PD T+ D+P ++ L + D FE + V + Sbjct: 118 ERLAQTGIGLGPDSMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + + D A P R +D A + V Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199 >gi|330877896|gb|EGH12045.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4] Length = 172 Score = 117 bits (294), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 6/176 (3%) Query: 40 EPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99 EPGGTP AE R +LL+ + A+ E ++ AAR H+ VIRPAL G+++LCDRF Sbjct: 1 EPGGTPLAERIRELLLAPSDEAMSADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFT 60 Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 D++YAYQG + L+E ++ PD T++ DLPV+IGL R R L Sbjct: 61 DATYAYQGGGRGLSQQRIAVLEEFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 114 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D FE++ + R +L A+ P R +VD+A V ++ ++ +L++ R Sbjct: 115 DRFEQEGRAFFDAVRSTYLQRAKADPARYRLVDAAQPLADVQASLDTLLPQLLELR 170 >gi|325576842|ref|ZP_08147457.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392] gi|325161048|gb|EGC73166.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392] Length = 210 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 114/217 (52%), Gaps = 14/217 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T + + L+ D+ TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGKI+L DR SS AYQG + +L+ Sbjct: 63 TDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLKN 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD + LD+ GL R + R L E LD+F R RQ +L++ Sbjct: 123 MVLGDFEPDFVLYLDIDPAEGLARARGRGELDRIEQQGLDFFHRT--------RQRYLEL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKR 215 +N P + I+++ V +I + V W + Q R Sbjct: 175 VQNNP-KAAIINAGQPLAQVQADIQSAVKNWWVSQTR 210 >gi|256786952|ref|ZP_05525383.1| integral membrane protein with kinase activity [Streptomyces lividans TK24] Length = 1063 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 464 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 523 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 524 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 583 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 584 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 635 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V T Sbjct: 636 ADPGRYLVVDAGQEPEAVTT 655 >gi|1730073|sp|P44719|KTHY_HAEIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1573430|gb|AAC22114.1| thymidylate kinase [Haemophilus influenzae Rd KW20] Length = 210 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 115/207 (55%), Gaps = 8/207 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 122 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ P + ++++ S + V +I + V Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAV 201 >gi|1074411|pir||A64153 dTMP kinase (EC 2.7.4.9) - Haemophilus influenzae (strain Rd KW20) Length = 237 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 29 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 88 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 89 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 148 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 149 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 202 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ P + ++++ S + V +I Sbjct: 203 KDNP-KAVVINAEQSIELVQADI 224 >gi|47570434|ref|ZP_00241070.1| thymidylate kinase [Bacillus cereus G9241] gi|47552892|gb|EAL11307.1| thymidylate kinase [Bacillus cereus G9241] Length = 208 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 114/209 (54%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLIEKVMPALNEDYLVLCDRFIDSSLAYQG---YARGLGMDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP TI LD+ ++GL R+ RE LD + + H++ R+ +L Sbjct: 119 INRFATEDCMPSLTIYLDIEPEVGLARIAKDAG-REVNRLDM---EGISFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVERFSDRIVLVNADQPMEKLIEEVIQVI 203 >gi|82701134|ref|YP_418234.1| putative thymidylate kinase [Pseudomonas phage EL] gi|82658039|emb|CAG27295.1| putative thymidylate kinase [Pseudomonas phage EL] Length = 215 Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 13/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + SG+F EG++G GKTT ++ + +L + DV TREPGGTP R +LLS +D Sbjct: 6 LYSGMFCVVEGLDGTGKTTVVNRITDWLVERGVDVVKTREPGGTPYCNRIRDLLLS--LD 63 Query: 61 EFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G E ++F AAR+ H+E +++P+L GK +LCDR++ ++ AYQGE Sbjct: 64 EGGEGPCQMTELLLFNAARVQHLETLVKPSLQAGKFVLCDRYVHTTIAYQGEARGLGVGK 123 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L + Q+ P T ILD PV++ L RV R ++ + + V +EK R Sbjct: 124 ILELHRLLTQDFWPHFTFILDAPVEVVLDRVHQR------GGMNRLDSQTVEFYEKARTA 177 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + D C ++D+ S V + + L K Sbjct: 178 YRRMGQTGRD-CALIDATVSEDEVFNQMTTYLERLCNK 214 >gi|302341674|ref|YP_003806203.1| thymidylate kinase [Desulfarculus baarsii DSM 2075] gi|301638287|gb|ADK83609.1| thymidylate kinase [Desulfarculus baarsii DSM 2075] Length = 226 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 1/209 (0%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG EG GK+T S+L R ++ V +TREPGG + R +LL G + Sbjct: 13 FITLEGGEGCGKSTQASMLGRRIRGLGLKVVLTREPGGASLGQTIRELLLGPGQEPVDPV 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++F A R HV I PAL+ G++++CDRF DSS YQG + L + Sbjct: 73 TELLLFLADRSHHVRAKIEPALLRGEVVVCDRFADSSEVYQGLARGLGLERVRRLNQWVC 132 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LDL +GL R R E++ + HE+ R+ FL A+ +P Sbjct: 133 GQCWPDLTLLLDLNPGLGLARAAQRQG-ELGQGPSPMEKEKLEFHERLREGFLAQAQAEP 191 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R VD+A + VA I V L+++ Sbjct: 192 GRIKPVDAARPAEEVAEAIWAHVEPLLRE 220 >gi|23465074|ref|NP_695677.1| thymidylate kinase [Bifidobacterium longum NCC2705] gi|23325685|gb|AAN24313.1| thymidylate kinase [Bifidobacterium longum NCC2705] Length = 193 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 114/202 (56%), Gaps = 15/202 (7%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD----EFGAEAEAIVF 71 GKTT + L+ +L+ + V VTREPGGT +A R +LL GVD + AEA++F Sbjct: 2 GKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLH-GVDGGAVDIAPRAEALLF 60 Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQEVMP 130 AA R HV IRPAL G++++ DR+LDSS AYQ G R+ + + SL + ++P Sbjct: 61 AADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPE-EIRSLSMWATNNLLP 119 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 D T +LD+ + R+++ ESA D+ R RQ FLD+A +P+R + Sbjct: 120 DRTYLLDMDPALSHHRLEHAEDRMESAGDDFQSRT--------RQAFLDLAAAEPNRFRV 171 Query: 191 VDSAHSFQSVATNILNIVWELV 212 +D++ S ++V I + + EL Sbjct: 172 IDASQSIEAVWAAIESDIKELA 193 >gi|283455190|ref|YP_003359754.1| thymidylate kinase [Bifidobacterium dentium Bd1] gi|283101824|gb|ADB08930.1| thymidylate kinase [Bifidobacterium dentium Bd1] Length = 252 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 33/223 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 12 GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 71 Query: 58 GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 GV A+ EA++FAA R HV VIRPAL G +++ DR+LDSS A Sbjct: 72 GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 131 Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 YQ + L L ++++S+ ++P+ T +LD+ R+++ ESA D+ Sbjct: 132 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 188 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 R R FL++AR +P+R ++D++ S + V I Sbjct: 189 QNRT--------RNAFLELARAEPERFRVIDASQSIEEVWQRI 223 >gi|238020860|ref|ZP_04601286.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147] gi|237867840|gb|EEP68846.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147] Length = 210 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 7/188 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGKTT +++++ + + V TREPGGTP EA R +LL+ + Sbjct: 5 FITLDGIDGAGKTTQLNVIRDWFAAQALPVLFTREPGGTPLGEALRALLLNPAT-QVSLH 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E+VI PAL G ++ DRF D+++AYQG ++ L+ Sbjct: 64 TETLLMFAARRQHLEDVILPALARGVSVVSDRFTDATFAYQGGGRGLPDGQIEILENWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI+LD+P+ + L+R++ RE D FE+++ + R+ +L A P Sbjct: 124 GSLKPDLTILLDVPLAVSLQRIERS---REK---DRFEQEEADFFTRVREAYLRRAAAAP 177 Query: 186 DRCHIVDS 193 +R +VDS Sbjct: 178 ERYAVVDS 185 >gi|171741466|ref|ZP_02917273.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC 27678] gi|171277080|gb|EDT44741.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC 27678] Length = 245 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 33/223 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------SC 57 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 5 GMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAADA 64 Query: 58 GVDEFGAEA-------------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 GV A+ EA++FAA R HV VIRPAL G +++ DR+LDSS A Sbjct: 65 GVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLA 124 Query: 105 YQGERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 YQ + L L ++++S+ ++P+ T +LD+ R+++ ESA D+ Sbjct: 125 YQA---GGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRHSEDRMESAGDDF 181 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 R R FL++AR +P+R ++D++ S + V I Sbjct: 182 QNRT--------RNAFLELARAEPERFRVIDASQSIEEVWQRI 216 >gi|240103826|ref|YP_002960135.1| thymidylate kinase [Thermococcus gammatolerans EJ3] gi|259494283|sp|C5A1K2|KTHY_THEGJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|239911380|gb|ACS34271.1| Thymidylate kinase (dTMP kinase) (tmk) [Thermococcus gammatolerans EJ3] Length = 208 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 18/211 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 G+F+ EGI+GAGK+T LL ++ ++K Y+V +T+EP T + R ++L+ G + Sbjct: 2 GIFVVIEGIDGAGKSTQAKLLAKWFEKKGYEVILTKEPTDTAFGKLIRKLVLTGGREGII 61 Query: 63 -GA----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 GA EAEA++FAA R +HV +I+PAL GK+++ DR+ SS AYQ R + Sbjct: 62 DGARISHEAEALLFAADRAEHVHKLIKPALESGKVVISDRYFYSSLAYQWARGLDLQWLI 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D L +V+ PD ++LDLPV ++R+ R E F+ K V + ++ R+ + Sbjct: 122 D-LNRFAVR---PDLVVLLDLPVKESMRRINGRSIKTE------FD-KIVELQKRVRENY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L +A P+ IV++ +S + + +I+ +V Sbjct: 171 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLV 200 >gi|134295921|ref|YP_001119656.1| thymidylate kinase [Burkholderia vietnamiensis G4] gi|166221731|sp|A4JEW8|KTHY_BURVG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|134139078|gb|ABO54821.1| thymidylate kinase [Burkholderia vietnamiensis G4] Length = 206 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ K + V VTREPGGTP EA R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGDRQVVVTREPGGTPLGEALREMLLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R + R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASER---RGAAR---APDKFESETDAFFTRTRDE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A+ P R IVD+ + + + ++ Sbjct: 172 YLRRAQEAPHRFTIVDATQTIPEIRGRLERVL 203 >gi|289770846|ref|ZP_06530224.1| integral membrane protein with kinase activity [Streptomyces lividans TK24] gi|289701045|gb|EFD68474.1| integral membrane protein with kinase activity [Streptomyces lividans TK24] Length = 1107 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V T Sbjct: 680 ADPGRYLVVDAGQEPEAVTT 699 >gi|284050175|ref|ZP_06380385.1| thymidylate kinase [Arthrospira platensis str. Paraca] gi|291571445|dbj|BAI93717.1| thymidylate kinase [Arthrospira platensis NIES-39] Length = 231 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 74/229 (32%), Positives = 115/229 (50%), Gaps = 25/229 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50 +G I FEGIEG GKTT I ++ +L + V VTREPGGT + Sbjct: 2 AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSPGGKLHQPGVQVTREPGGTQLGQHL 61 Query: 51 RHVLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 R +LL ++E +E +++AA R H+E +I+P L +G ++LCDRF DS+ AYQG Sbjct: 62 RDLLLHHEINEPLSDRSELLLYAADRAQHIETLIKPLLDQGTMILCDRFTDSTLAYQGYG 121 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + +I+ ++PD T+ L++PV+ GL R++ R D E+ D+ Sbjct: 122 RGLDLQQIHQINQIATGGLVPDLTLWLNVPVEAGLTRIKARKK------ADRIEQADLEF 175 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV------WELV 212 H + + F +A+ P R +D V I NI+ W L+ Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKLLEWGLI 224 >gi|21221961|ref|NP_627740.1| integral membrane protein with kinase activity [Streptomyces coelicolor A3(2)] gi|4539560|emb|CAB38479.1| integral membrane protein with kinase activity [Streptomyces coelicolor A3(2)] Length = 1089 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V T Sbjct: 680 ADPGRYLVVDAGQEPEAVTT 699 >gi|229818395|ref|ZP_04448676.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM 20098] gi|229784265|gb|EEP20379.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM 20098] Length = 215 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 17/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59 M+ G+FISFEG++G GKTT ++ L+ L+ +V VTREPGGT A R +LL V Sbjct: 3 MHQGIFISFEGVDGVGKTTQVNRLRDELEAMGREVVVTREPGGTALGTAIRRLLLHGVPV 62 Query: 60 DEFGAEA--------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + EA EA++FAA R HV VIRPAL G +++ DR+ DSS AYQ Sbjct: 63 ESADGEACADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYCDSSLAYQAGGRE 122 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + SL + ++P T +LD+ + R+ + E+A F+R+ Sbjct: 123 LTAAEIRSLSMWATDGLLPVRTYLLDMDPALSHTRLDHDEDRMEAAG-SAFQRRT----- 176 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 RQ FLD+A +P+R ++D++ + + V I Sbjct: 177 --RQAFLDLAAREPNRFRVIDASGTVEEVWQAI 207 >gi|318076468|ref|ZP_07983800.1| thymidylate kinase [Streptomyces sp. SA3_actF] Length = 896 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 224 TGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 283 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G I++ DR++DSS AYQG + + + Sbjct: 284 SHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARISR 343 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LD+ + +R + D E + H + R FL +A Sbjct: 344 WATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 395 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P+R +VD A +SV + Sbjct: 396 AAPERYLVVDGAQEPESVTRTV 417 >gi|269215702|ref|ZP_06159556.1| dTMP kinase [Slackia exigua ATCC 700122] gi|269131189|gb|EEZ62264.1| dTMP kinase [Slackia exigua ATCC 700122] Length = 247 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 113/214 (52%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG+FI+FEG EGAGK+THI++L L+R ++V REPGGT EA R V+L +E Sbjct: 10 SSGVFITFEGGEGAGKSTHIAILAHVLERLGHEVLRLREPGGTSVGEALRAVVLDPDREE 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119 +E VF A+R V VI PAL G ++LCDRF+DS+ AYQ + + LD+ Sbjct: 70 MCGLSELFVFEASRAQLVSQVIAPALERGAVVLCDRFIDSTTAYQA---YGRGIDLDAVR 126 Query: 120 -LQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L ++ Q +P T+++ GL R + R D F H + Q F Sbjct: 127 FLNLLACQGTLPARTLLMQAADAHAGLARATTLGADRMEQASDRF-------HARVAQGF 179 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +A +P+R V SA S + A ++ V +L Sbjct: 180 DALAACEPERFRAVSSAGSVEDTAVQVVASVSDL 213 >gi|205372020|ref|ZP_03224838.1| thymidylate kinase [Bacillus coahuilensis m4-4] Length = 210 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 10/210 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG EGAGKTT + L LQ ++ D TREPGG AE R ++L+ Sbjct: 4 SGYFITVEGPEGAGKTTVVKRLLERLQEESIDAVATREPGGIAIAEDIRSIILNPENTSM 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---S 119 EA+++AAAR H+ + PAL +GK+++CDRFLDSS AYQG ++ L +D + Sbjct: 64 DPRTEALLYAAARRQHLVEKVLPALEDGKVIICDRFLDSSLAYQG---YARGLGVDEVLN 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E ++ MP T+ D+ + GL+R+ R RE LD + + H K + + Sbjct: 121 INEFAIDGCMPSLTLFFDISPEAGLERIA-RNKGREINRLDL---EGIEFHHKVYEGYKK 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +R +V++ V L I+ Sbjct: 177 VISRNKNRVQLVNADQDVHQVVEEALQIIL 206 >gi|291452943|ref|ZP_06592333.1| thymidylate kinase [Streptomyces albus J1074] gi|291355892|gb|EFE82794.1| thymidylate kinase [Streptomyces albus J1074] Length = 1104 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 507 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 566 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 567 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 626 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 627 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 678 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 DR +VD+ + V T Sbjct: 679 ADQDRYLVVDAGQQPEEVTT 698 >gi|323359121|ref|YP_004225517.1| thymidylate kinase [Microbacterium testaceum StLB037] gi|323275492|dbj|BAJ75637.1| thymidylate kinase [Microbacterium testaceum StLB037] Length = 224 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 12/210 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++FEG +GAGKTT +LL+ +L+ +V TREPGGT R ++L D Sbjct: 19 GPGLFVTFEGGDGAGKTTQAALLEAWLRENGREVVRTREPGGTEVGVLVRDIVLHHRGD- 77 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R H+E V+RPA+ G +++ DR+LDSS AYQG + + L D ++ Sbjct: 78 IAPRAEALLYAADRAHHIETVVRPAISRGDVVIQDRYLDSSVAYQG---AGRVLDADDIR 134 Query: 122 EISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++S+ ++PD T++LDL R+ + D E + H + R FL Sbjct: 135 DLSLWATGGLLPDLTVLLDLDPAAARSRLDA-----DEKPFDRLEAEKGEFHTRVRDGFL 189 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A +P+R ++D+ +A + V Sbjct: 190 ALAAAEPERFIVLDARQPVPELADRVREAV 219 >gi|193212981|ref|YP_001998934.1| dTMP kinase [Chlorobaculum parvum NCIB 8327] gi|238692645|sp|B3QP81|KTHY_CHLP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|193086458|gb|ACF11734.1| dTMP kinase [Chlorobaculum parvum NCIB 8327] Length = 217 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 117/213 (54%), Gaps = 10/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T + LKR LQ + +V REPGGTP AE R +LL D + Sbjct: 1 MLITFEGIDGAGKSTQVVKLKRHLQERGREVLTLREPGGTPVAEQIRELLLESHND-ITS 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122 AE ++F+A+R + +E +I PAL +G ++ DRF DS+ AYQG + L LD L E Sbjct: 60 IAELLLFSASRAELMEKIIVPALEDGCDVILDRFFDSTTAYQG---YGRGLNLDMLAEIN 116 Query: 123 -ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFL 178 I+ + PD T LDL + L R + SL ES LD E + +++ R + Sbjct: 117 RIASHGIRPDITFYLDLTPEDALLRKFSEKSLPLAFESEELDRMENSGLEFYQRVRAGYH 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 I +P R ++D+ + Q + IL+ + L Sbjct: 177 AILEAEPQRIIMIDALLTPQEIHRKILSALQAL 209 >gi|315654563|ref|ZP_07907469.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333] gi|315491027|gb|EFU80646.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333] Length = 239 Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 6/203 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++FEG +G GKTT I+ +++ + +DV TREPGGT A R +LL G + Sbjct: 29 TQGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--D 86 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA++FAA R HV +I PA+ +GK+++ DR+L SS AYQG + L Sbjct: 87 VSPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGDREIRDLS 146 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LDL ++ R SL D ER + E+ R+ FL ++ Sbjct: 147 LWATGGLVPNLTVLLDLDPEVAAARQAADASL---GSPDRMERAGIEFQERVREDFLRMS 203 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 Q D +VD++ +A + Sbjct: 204 EGQ-DTWLVVDASLPVAEIAAQV 225 >gi|239981076|ref|ZP_04703600.1| thymidylate kinase [Streptomyces albus J1074] Length = 1095 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 498 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 557 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 558 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 617 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 618 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 669 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 DR +VD+ + V T Sbjct: 670 ADQDRYLVVDAGQQPEEVTT 689 >gi|313680451|ref|YP_004058190.1| thymidylate kinase [Oceanithermus profundus DSM 14977] gi|313153166|gb|ADR37017.1| thymidylate kinase [Oceanithermus profundus DSM 14977] Length = 209 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 10/188 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEG EG+GK+T + L L+ + +T EPGGT R LL G E Sbjct: 7 FISFEGPEGSGKSTQAARLAARLRARGVSTVLTHEPGGTELGREVRRWLLHQGA-AMSPE 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++++A R +HV V+ PAL G ++CDRF+DSSYAYQG +L S+ + + Sbjct: 66 AEFLLYSADRAEHVRTVLEPALAAGSFVICDRFVDSSYAYQGYGRGLDLAWLRSVSDGIL 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + V P T +LDLP + GL R+ R D E + + H + R+ + +A+++P Sbjct: 126 RGVRPSLTFLLDLPPERGLARLAGR---------DRLEGESLTFHRRVREGYRSLAQSEP 176 Query: 186 DRCHIVDS 193 +R ++D+ Sbjct: 177 ERFVVLDA 184 >gi|157151481|ref|YP_001450818.1| thymidylate kinase [Streptococcus gordonii str. Challis substr. CH1] gi|189030844|sp|A8AYF8|KTHY_STRGC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157076275|gb|ABV10958.1| thymidylate kinase [Streptococcus gordonii str. Challis substr. CH1] Length = 212 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL +S EG +GAGK++ + L L+ + + V TREPGG P +EA R V+L Sbjct: 1 MKRGLLVSLEGPDGAGKSSVLEALVPILEAQGHQVVTTREPGGVPISEAIREVILDQNNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG ++ L Sbjct: 61 EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ + RE LD + + +H++ RQ +L Sbjct: 121 NQYATDGLKPDLTLYFDLDVEEGLARIAKNKN-REVNRLDL---EGLEMHQRVRQGYLYS 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 P+R +D++ + + V + L ++ Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVL 204 >gi|301155188|emb|CBW14652.1| thymidylate kinase [Haemophilus parainfluenzae T3T1] Length = 210 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 115/217 (52%), Gaps = 14/217 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T + + L+ D+ TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETAELV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGKI+L DR SS AYQG + +L+ Sbjct: 63 TDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLKN 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD + LD+ GL R + R L E LD+F R RQ +L++ Sbjct: 123 MVLGDFEPDFVLYLDIDPAEGLARARGRGELDRIEQQGLDFFHRT--------RQRYLEL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKR 215 +N P + I+++ + V +I + V W + Q + Sbjct: 175 VQNNP-KAAIINAGQALAQVQADIQSAVKSWWVSQAK 210 >gi|212223342|ref|YP_002306578.1| thymidylate kinase [Thermococcus onnurineus NA1] gi|229621846|sp|B6YSZ4|KTHY_THEON RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|212008299|gb|ACJ15681.1| thymidylate kinase [Thermococcus onnurineus NA1] Length = 205 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 120/210 (57%), Gaps = 18/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62 +FI EGI+GAGK+T LL + ++K YDV +T+EP T + R ++L+ G + Sbjct: 1 MFIVIEGIDGAGKSTQARLLAEWFKKKGYDVVLTKEPTDTAFGKLIRRLVLTGGKEGIID 60 Query: 63 GA----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 GA EAEA++FAA R +HV +I+P+L GKI++ DR+ SS AYQ R L L+ Sbjct: 61 GARISHEAEALLFAADRAEHVHKLIKPSLKTGKIVISDRYFYSSLAYQWARG----LDLE 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L +++ V PD I+LDLPV +KR+ R E F+ K + +K R+ +L Sbjct: 117 WLIDLNRFAVRPDLVILLDLPVKESMKRINGRSIKTE------FD-KIAELQKKVRENYL 169 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A P+ IV++ S + + +I+ +V Sbjct: 170 KLAERFPE-MRIVNALASVEDIHNDIVALV 198 >gi|325845428|ref|ZP_08168721.1| dTMP kinase [Turicibacter sp. HGF1] gi|325488534|gb|EGC90950.1| dTMP kinase [Turicibacter sp. HGF1] Length = 222 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG FI+ EG EGAGKTT + L + L + TREPGG AE R V+L Sbjct: 13 MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + EA+++AAAR H+ ++PA+ GKI+LCDRF+DSS YQG ++ + +D + Sbjct: 73 EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQG---YARGIGMDEV 129 Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +EI +++ MPD TI D+ + GL R+ S RE LD + + H+ + + Sbjct: 130 REINQFAIEGFMPDMTIFFDIKPEDGLARIAAN-SGREVNRLDL---EGLEFHQLVYEGY 185 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A +R VD+ S ++V I ++ E + K Sbjct: 186 KIQANLFSERIVTVDATQSIEAVTNEICQLILEKLGK 222 >gi|148657338|ref|YP_001277543.1| dTMP kinase [Roseiflexus sp. RS-1] gi|166223113|sp|A5UY90|KTHY_ROSS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148569448|gb|ABQ91593.1| thymidylate kinase [Roseiflexus sp. RS-1] Length = 226 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG EG+GK+T LL L + + V +TREPGGT + R ++L E Sbjct: 3 LFVTFEGPEGSGKSTQARLLYESLHARRFPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F+AAR V VIRP L +G I+LCDR+ DS++AYQG L + + Sbjct: 63 TAEMLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTFAYQGYGLGRDLAELRVITAAA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFER---KDVMIHEKRRQIFL 178 + PD T LD+ GL+R + R + + A D + R +++ H++ + Sbjct: 123 TGGLRPDITFYLDISAAEGLERKRRKGARSTGQRGANNDEWNRLDARELEYHQRVEAGYR 182 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ P+R ++D+ S +++A I IV Sbjct: 183 ELIAADPERWRVLDARQSIEALAEQIGAIV 212 >gi|194336672|ref|YP_002018466.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1] gi|238693358|sp|B4SAG3|KTHY_PELPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|194309149|gb|ACF43849.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1] Length = 217 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 78/220 (35%), Positives = 116/220 (52%), Gaps = 8/220 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62 + I+FEGI+GAGK+T I L L + + V REPGGT AE R +LL S G+ Sbjct: 1 MLITFEGIDGAGKSTQIKELVHALGLQGIEAVVLREPGGTTVAEKIRQILLESSHGITPV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E ++F+A+R + V+ VIRPAL GK ++ DRF DS+ AYQG L S+ Sbjct: 61 G---ELLLFSASRAELVQEVIRPALASGKTIILDRFFDSTTAYQGYGRGIDMELLRSIIA 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLD 179 IS + PD T LDL + LKR ++ S+ E LD ER + + R+ +LD Sbjct: 118 ISTCGITPDITFYLDLEPEEALKRKYSKTSIPLAFEGEELDRMERSGLEFYRNVRRGYLD 177 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 I + + R +++ + IL ++ E ++P+ Sbjct: 178 IKQLENRRFVQLNALDPVAVIHGKILALLGERFPSFLNPV 217 >gi|257784894|ref|YP_003180111.1| thymidylate kinase [Atopobium parvulum DSM 20469] gi|257473401|gb|ACV51520.1| thymidylate kinase [Atopobium parvulum DSM 20469] Length = 219 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 7/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+ EG++G GK+T SLL+ L+ N+DV REPGGT +E R V+L+ Sbjct: 8 SQGLFITLEGVDGCGKSTQASLLREDLKALNFDVVFVREPGGTAISEQIRDVVLNPKNGA 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +++ A+R VE VIRPAL GK++LCDRF DS+YAYQ + Sbjct: 68 MCDECELLLYEASRAQLVEEVIRPALASGKVVLCDRFYDSTYAYQAAGRGLDTDLVHHAN 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T++ L + R + D E + V E+ + + Sbjct: 128 RLGSCGVSPDRTLVFMLEPTVAHARATQNDT-------DRLEAEGVAFQERVFAGYKQLL 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++P+R +D+ S V T ++ +L+ Sbjct: 181 QDEPERVKAIDADGSIDEVRTRTRQLLADLI 211 >gi|322372419|ref|ZP_08046955.1| dTMP kinase [Streptococcus sp. C150] gi|321277461|gb|EFX54530.1| dTMP kinase [Streptococcus sp. C150] Length = 209 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKT+ + +LL R + V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTSVLEALLPRLKEVYPGQVITTREPGGVAIAEQIREVILDVDN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L +G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGAGRGLDQTEIAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GLKR+ RE LD E+ D +H++ R+ +LD Sbjct: 121 LNAYATDGHKPDVTLLFDVDSETGLKRIAANGE-REVNRLD-LEKLD--MHQRVRKGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A +P+R ++D++ F V + I+ Sbjct: 177 LAMVEPERIKLIDASQPFDKVIEDAWQII 205 >gi|319775618|ref|YP_004138106.1| thymidylate kinase [Haemophilus influenzae F3047] gi|329122334|ref|ZP_08250922.1| dTMP kinase [Haemophilus aegyptius ATCC 11116] gi|317450209|emb|CBY86425.1| thymidylate kinase [Haemophilus influenzae F3047] gi|327473895|gb|EGF19312.1| dTMP kinase [Haemophilus aegyptius ATCC 11116] Length = 219 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 12 GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 72 TAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI LD+ +GL R + R LD E+ D+ + R +L + + Sbjct: 132 TVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 185 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 186 DNP-KAVVINAEQSIELVQADIESAV 210 >gi|261856504|ref|YP_003263787.1| thymidylate kinase [Halothiobacillus neapolitanus c2] gi|261836973|gb|ACX96740.1| thymidylate kinase [Halothiobacillus neapolitanus c2] Length = 217 Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 5/205 (2%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN+ G+FI+ EGIEGAGK+T I+ + + + +V TREPGGTP AEA R VLL+ Sbjct: 1 MNAPGIFITIEGIEGAGKSTAIAGVAEWFRAHGREVDCTREPGGTPIAEAIREVLLNPAE 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ E ++ AAR HV I+P L GK+++ DRF DSS AYQG +++ Sbjct: 61 EDLVPPTELMLMFAARAQHVAGRIKPGLAAGKVVISDRFTDSSRAYQGAGRGMDRSLIET 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + Q V PD T++LDLPVD+G+KR R D FER+ E+ R FL+ Sbjct: 121 LAQTAEQGVSPDLTLLLDLPVDVGMKRAAARRGAGAH---DRFERERHDFFERVRAGFLE 177 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A Q R ++D+A V I Sbjct: 178 LA-GQSTRFALIDAAAPIADVHMQI 201 >gi|314932704|ref|ZP_07840074.1| dTMP kinase [Staphylococcus caprae C87] gi|313654534|gb|EFS18286.1| dTMP kinase [Staphylococcus caprae C87] Length = 205 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/195 (35%), Positives = 111/195 (56%), Gaps = 8/195 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ IS + + L + DV TREPGG P E R V+L ++ Sbjct: 4 FITFEGPEGAGKTSVISKVSQKLA-TDMDVITTREPGGVPTGEEIRRVVLEG--NKMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++D HEK + + I + P Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRIIDSDP 175 Query: 186 DRCHIVDSAHSFQSV 200 +R V++ ++V Sbjct: 176 ERFVKVNADQDLENV 190 >gi|29831165|ref|NP_825799.1| thymidylate kinase [Streptomyces avermitilis MA-4680] gi|29608279|dbj|BAC72334.1| putative thymidylate kinase [Streptomyces avermitilis MA-4680] Length = 1073 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEVARISR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 R IVD+ ++V T I Sbjct: 680 ADLGRYLIVDAGQEPEAVTTVI 701 >gi|325283899|ref|YP_004256440.1| Thymidylate kinase [Deinococcus proteolyticus MRP] gi|324315708|gb|ADY26823.1| Thymidylate kinase [Deinococcus proteolyticus MRP] Length = 211 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 13/215 (6%) Query: 1 MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M++G FI+FEG EGAGK+T ++ L L+ +T+EPGGT A + R LL Sbjct: 1 MSAGTLPFITFEGGEGAGKSTQLARLAARLEAAGVPHLLTKEPGGTAAGDQIRATLLDPA 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +D AE ++++A+R V V++PAL G++++CDR+ DS+ AYQG FL Sbjct: 61 LD-IDPLAEFLLYSASRAQLVREVLQPALERGELVVCDRYADSTLAYQGYGRGLPLPFLQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ + + P T++LDL +GL RV R D ER D+ H + R FL Sbjct: 120 AVTAEATGGLTPALTVLLDLDPAVGLARVAQR------GQADRLERADLDFHRRLRAGFL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A QP R ++D+ S A + +W VQ Sbjct: 174 ALAEQQPQRWLVLDAGRS----ADELEEAIWARVQ 204 >gi|254517430|ref|ZP_05129486.1| dTMP kinase [Clostridium sp. 7_2_43FAA] gi|226911179|gb|EEH96380.1| dTMP kinase [Clostridium sp. 7_2_43FAA] Length = 209 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 120/216 (55%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G FI FEG +G+GK+T + ++ +L N + TREPGG +E R V+L Sbjct: 1 MDKGKFIVFEGGDGSGKSTILDMVYDYLIENNIECIKTREPGGIKISEDIREVILDTKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + EA+++AAAR H+ + P + G I+LCDRF+ SS AYQG ++++ +D + Sbjct: 61 KMDSRTEALLYAAARRQHLVEKVIPEIDRGAIVLCDRFIYSSLAYQG---YARNIGIDEI 117 Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +I +V E MPD I+ DL +IGL+R+ N+ RE LD E+ D H K R + Sbjct: 118 YQINKFAVGEYMPDLNILFDLSPEIGLERI-NKNKEREINRLD-LEKID--FHNKVRDGY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 L + ++ +++ S + V + I+ + ++ Sbjct: 174 LKLYEENKEKFVKINAEKSIEEVFNVVKEIITDFIK 209 >gi|119469414|ref|ZP_01612353.1| thymidylate kinase [Alteromonadales bacterium TW-7] gi|119447278|gb|EAW28547.1| thymidylate kinase [Alteromonadales bacterium TW-7] Length = 208 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG+EGAGK+T ISL + FL +K + REPGGTP AE+ R ++ + +E E Sbjct: 5 FIVVEGLEGAGKSTAISLCQDFLNKKQIEYINVREPGGTPLAESLRTLVKAEHKEEIAFE 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR + NVI PAL +GK +L DR SS AYQG L SL + + Sbjct: 65 TELLIMYAARSQLMHNVINPALEQGKWILADRHDLSSQAYQGGGRGISSNTLASLSSMVL 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + + PD TI LD+ IGL+R + R LD E++ + ++ R +L++A + Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELASDD- 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 + VD+ V +I N++ Sbjct: 178 NSIKTVDANQEIDKVHRDITNVL 200 >gi|152964459|ref|YP_001360243.1| dTMP kinase [Kineococcus radiotolerans SRS30216] gi|151358976|gb|ABS01979.1| dTMP kinase [Kineococcus radiotolerans SRS30216] Length = 662 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 G F++ EG +G+GKTT +LL +L+ + ++V VTREPGGT R VLL+ +E Sbjct: 446 GGCFVALEGGDGSGKTTQATLLAEWLRERGHEVVVTREPGGTATGRELREVLLNHRGEEQ 505 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA++FAA R HV V+RP L G ++L DR++DSS AYQG +++L Sbjct: 506 PLSPRAEALLFAADRAQHVAEVVRPGLDRGAVVLTDRYVDSSLAYQGAGRDLPAAEVETL 565 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q ++PD T++LD + A D E + H + R+ FL + Sbjct: 566 STWATQGLLPDLTVVLD------VDPATAARRRAGRAADDRMEAESQAFHARVREQFLLL 619 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 A P R ++D++ S + V Sbjct: 620 AARDPARYLVLDASTSPEVV 639 >gi|229083343|ref|ZP_04215702.1| Thymidylate kinase [Bacillus cereus Rock3-44] gi|228699968|gb|EEL52594.1| Thymidylate kinase [Bacillus cereus Rock3-44] Length = 208 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GK+T I+ L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIREILHKQEHTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALERNYLVLCDRFIDSSLAYQG---YARGLGVDKVYE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP+ TI LD+ ++GL R++ + RE LD + + H++ R+ +L Sbjct: 119 INRFATEDCMPNLTIYLDIEPEVGLARIEKDAN-REVNRLDM---ESIKFHKRVREGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +R +V++ + + ++ ++ Sbjct: 175 LVDRFANRIVVVNADQPMEEIMEEVIQLI 203 >gi|206603846|gb|EDZ40326.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG'] Length = 220 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 114/204 (55%), Gaps = 6/204 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ I+FEGI+G+GK+T + L +V ++REPG TP E R++LLS V Sbjct: 6 TGILITFEGIDGSGKSTQARDIHNALSLAGLNVRLSREPGATPLGEEIRNILLSDKV-PV 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AE +F A R +HV++V+RP+ G++LL DRF+D++ AYQG +++L + Sbjct: 65 GNLAELFLFLADRAEHVQDVLRPSRSNGEVLLVDRFIDATTAYQGYGMGHPLSLIENLHK 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +QE+ P T +LD+ +R++ R + + E + + +K R +L+IA+ Sbjct: 125 TILQEIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFQKVRNGYLEIAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206 P R ++D+ + + ILN Sbjct: 180 QNPHRFRVLDATLPREELNRAILN 203 >gi|317050750|ref|YP_004111866.1| thymidylate kinase [Desulfurispirillum indicum S5] gi|316945834|gb|ADU65310.1| thymidylate kinase [Desulfurispirillum indicum S5] Length = 208 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 108/208 (51%), Gaps = 7/208 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FISFEG +GAGKTT +SLL R+L ++ H TREPGGTP AEA R+++ Sbjct: 2 NGRFISFEGPDGAGKTTQLSLLSRYLDDRDILHHCTREPGGTPGAEAIRNLIFDS-RHNL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++FAAAR HVE I P L +G +LCDRF S+ YQG + L Sbjct: 61 VPRAELLLFAAARAQHVEERIMPLLEKGIWVLCDRFTLSTLVYQGYGRGLDRELIGQLNA 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + P ++LD+ + G RVQ R S F+ H + F ++A Sbjct: 121 IATCGLAPHMQLVLDVEAEAGQNRVQQRLENNNS-----FDALSEDFHRRVVAGFREVAS 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 + C ++D + + + V +I+ + E Sbjct: 176 HDA-HCRLIDGSRNPEQVHGSIVAALHE 202 >gi|322392107|ref|ZP_08065569.1| thymidylate kinase [Streptococcus peroris ATCC 700780] gi|321145007|gb|EFX40406.1| thymidylate kinase [Streptococcus peroris ATCC 700780] Length = 212 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + + L+ KN +V TREPGG E R V+L Sbjct: 1 MSKGFLVSIEGPEGAGKTSVLEAILPVLEEKNIEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL+R+ S RE LD + + +H K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAAN-SNREVNRLDL---EGLDLHRKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ V N ++++ Sbjct: 177 LEKEGERIVKIDASLPLDQVVENTKQVLFD 206 >gi|295837412|ref|ZP_06824345.1| dTMP kinase [Streptomyces sp. SPB74] gi|295826517|gb|EDY43005.2| dTMP kinase [Streptomyces sp. SPB74] Length = 1172 Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats. Identities = 64/202 (31%), Positives = 107/202 (52%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 493 NGFFLALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 552 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + + Sbjct: 553 SHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPVEIARISR 612 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 613 WATGGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRTGFLTLAA 664 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P+R +VD A +SV + Sbjct: 665 AAPERYLVVDGAQEPESVTRTV 686 >gi|168334030|ref|ZP_02692249.1| thymidylate kinase [Epulopiscium sp. 'N.t. morphotype B'] Length = 200 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 120/211 (56%), Gaps = 18/211 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLFI+ EG EG+GKTT SLLK + N V TREPGG +AE+ R + +D Sbjct: 1 MNRGLFIAIEGGEGSGKTTLCSLLKTHFEADNIPVIATREPGGIESAESIRDNIFQFDLD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ + +++ AAR +H+ + I PAL GK++L DRF S+ AYQG + +L +D + Sbjct: 61 ---AKTDLLLYLAARREHLIHTILPALNAGKLVLSDRFYLSTLAYQG---YASNLDIDII 114 Query: 121 QEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 Q+ + +++PD II+DLP +IGL R+ ++ F+ K + H K + + Sbjct: 115 QKFNNFVCDDILPDLNIIIDLPPNIGLS--------RKGVDINRFDLKGLDFHTKVYEGY 166 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L ++ + + +++D S S+ I +++ Sbjct: 167 LQLSASIKN-VYLIDGTSSLTSLEHQIYSLI 196 >gi|320010005|gb|ADW04855.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331] Length = 1036 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F+ EG +GAGK+T + + +++ K ++V VTREPG TP + R +LL Sbjct: 506 NGFFLVLEGGDGAGKSTQVEAIAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +R + D E + H++ R FL +A Sbjct: 626 WATSGLVPHLTVLLDVDPQTARERF--------TEAPDRLESEPAEFHDRVRSGFLTLAA 677 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ +++ T Sbjct: 678 ADPARYLVVDAGQEAEAITT 697 >gi|56460444|ref|YP_155725.1| thymidylate kinase [Idiomarina loihiensis L2TR] gi|73920821|sp|Q5QZ32|KTHY_IDILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56179454|gb|AAV82176.1| Thymidylate kinase [Idiomarina loihiensis L2TR] Length = 205 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 7/208 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI EG+EGAGK++ I+ + LQ K V REPGGTP AE+ R ++ ++ Sbjct: 2 SGKFIVIEGLEGAGKSSAIASVVTHLQAKGIQVETVREPGGTPLAESLRDLVKKKWEEKV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ A+R+ V+N+I+PAL + + ++ DR SS AYQG L +++ Sbjct: 62 SPTTELLLMYASRVQLVDNIIKPALSKNRWVIGDRHDLSSRAYQGGGRELGDELLQKIRK 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ PD T++LD+ GL+R RE LD E +D+ ++ RQ +L+IA Sbjct: 122 ITLGNFTPDLTLLLDVEEKKGLERA------RERGELDRIEEEDLAFFQRTRQRYLNIAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P ++D+ S V +IL + E Sbjct: 176 KDPS-IIVIDANQSMLDVHQSILRAIEE 202 >gi|332035197|gb|EGI71706.1| thymidylate kinase [Pseudoalteromonas haloplanktis ANT/505] Length = 208 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 111/203 (54%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG+EGAGK+T ISL + FL ++ D REPGGTP AE+ R ++ + +E E Sbjct: 5 FIVIEGLEGAGKSTAISLCQDFLNKQKIDFINVREPGGTPLAESLRTLVKAEHEEEIAFE 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR + NVI PAL +G+ +L DR SS AYQG L SL + + Sbjct: 65 TELLIMYAARSQLMHNVITPALDKGQWVLADRHDLSSQAYQGGGRGISSNTLASLSSMVL 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + + PD TI LD+ IGL+R + R LD E++ + ++ R ++++A N Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYVELA-NDD 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 + VD+ S V +I N++ Sbjct: 178 NTIKTVDANQSIDKVHRDITNVL 200 >gi|145628830|ref|ZP_01784630.1| thymidylate kinase [Haemophilus influenzae 22.1-21] gi|144979300|gb|EDJ88986.1| thymidylate kinase [Haemophilus influenzae 22.1-21] Length = 210 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 63 TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD TI LD+ +GL R + R LD E+ D+ + R +L + + Sbjct: 123 TVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 177 DNP-KAVVINAEQSIELVQADIESAV 201 >gi|81298904|ref|YP_399112.1| thymidylate kinase [Synechococcus elongatus PCC 7942] gi|81167785|gb|ABB56125.1| thymidylate kinase [Synechococcus elongatus PCC 7942] Length = 215 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLL 55 MN G FI EGI+G GK+T + L +L + + TREPG T +A R +LL Sbjct: 1 MNFGNFIVLEGIDGCGKSTQLQRLVNWLPHSSLLQPGQVIVATREPGDTALGQALRSLLL 60 Query: 56 S--CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + AE +++AA R HVE V+RP L G +++CDR++DS+ AYQG Sbjct: 61 TQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAVVVCDRYVDSTVAYQGYGRGLD 120 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L ++ + D T+ LDLPV I +R Q R D E + E+ Sbjct: 121 QSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQARGQ------GDRMEAAGLAFQERL 174 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 RQ F IA +PDR +D+A VA I +V Sbjct: 175 RQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVV 209 >gi|15643856|ref|NP_228905.1| thymidylate kinase [Thermotoga maritima MSB8] gi|8134526|sp|Q9X0I3|KTHY_THEMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|160286313|pdb|2Z0H|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|160286314|pdb|2Z0H|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|238828331|pdb|3HJN|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|238828332|pdb|3HJN|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|4981644|gb|AAD36175.1|AE001769_5 thymidylate kinase [Thermotoga maritima MSB8] Length = 197 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL ++L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLE---EEVTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R + + I+ L EG +L DR+ DSS AYQG + ++ L + + Sbjct: 58 KAELFLFLASR-NLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ LKR L+ FE+++ + E+ R+ +L +AR Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKREFL--ERVREGYLVLAREH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211 P+R ++D S + + +++ V W+L Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVKRRWKL 195 >gi|119897886|ref|YP_933099.1| thymidylate kinase [Azoarcus sp. BH72] gi|119670299|emb|CAL94212.1| dTMP kinase [Azoarcus sp. BH72] Length = 206 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGI+GAGK++ I+ + L+ + V +REPGGTP E R +LL + Sbjct: 1 MQHGRFITFEGIDGAGKSSQIAAVVDILRARGCTVEQSREPGGTPLGERLRELLLH---E 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119 E EA++ AAR +H+ I PAL G ++CDRF D++YAYQ G R ++ F D+ Sbjct: 58 PMNLETEALLMFAARREHLAARIVPALQAGNWVVCDRFSDATYAYQVGGRGLAREKF-DA 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ + PD T++ DLP +I RV + A D FER+ E+ R +L+ Sbjct: 117 LEAWVHPGLQPDLTLVFDLPPEIAAARV-----VSSGAQPDRFEREQRDFFERVRNAYLE 171 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ P R ++D+ + + I +V E Sbjct: 172 RAQAAPQRIRVIDANRPPEVIRAEIEQLVVE 202 >gi|328955029|ref|YP_004372362.1| thymidylate kinase [Coriobacterium glomerans PW2] gi|328455353|gb|AEB06547.1| thymidylate kinase [Coriobacterium glomerans PW2] Length = 242 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 10/210 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 S FI+ EGI+G GK+T LL L+ Y+V + REPGG +E R +LL E Sbjct: 23 SPAFITLEGIDGCGKSTQARLLAATLEHAGYEVELLREPGGAAISEKIRQLLLDPANAEM 82 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A E +++ AAR V +I PAL G++++CDRF DS+ +YQ +D+ Sbjct: 83 SATCELMLYEAARAQLVHQLIVPALQTGRVVVCDRFYDSTTSYQSFGSGIDRATVDTANG 142 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V + P TI+ D+ D+ +R+ R D E K ++ + F IA Sbjct: 143 LAVGAIRPLITIVCDIAPDLAAERMPGR-------ARDRMEAKGAAFQQRAAEGFRAIAA 195 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R ++D++ + VA +L V EL+ Sbjct: 196 EEPERVRLIDAS---EDVAHVLLRSVAELI 222 >gi|326802968|ref|YP_004320786.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a] gi|326650724|gb|AEA00907.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a] Length = 226 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 118/213 (55%), Gaps = 9/213 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62 G+FISFEG +G+GKTT I LK L + + +REPGG AE R ++LS E Sbjct: 3 GVFISFEGPDGSGKTTLIKGLKARLDQDLKQAPIFSREPGGDRIAEEIRDIILSPVNTEL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A +EA+++AA+R H+ IRPAL G ++LCDR++DSS AYQG + + Sbjct: 63 DARSEALLYAASRAQHLAQKIRPALAAGNMVLCDRYVDSSIAYQGYGRKLGGQAVQLINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++PD T+ D+ + G+ R++ + ++ +++ + H + Q + D+ + Sbjct: 123 FAIDGLLPDLTLYCDISAEEGIARIE----AGRTNEINRLDQESIAFHRRVVQGYQDLLK 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 PDR +D++ +++ +EL+++R Sbjct: 179 ENPDRIVPIDASQPAEAMQA----AAYELIRQR 207 >gi|260582278|ref|ZP_05850071.1| thymidylate kinase [Haemophilus influenzae NT127] gi|260094646|gb|EEW78541.1| thymidylate kinase [Haemophilus influenzae NT127] Length = 219 Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ P + ++++ S + V +I Sbjct: 185 KDNP-KAVMINAEQSIELVQADI 206 >gi|170289496|ref|YP_001739734.1| dTMP kinase [Thermotoga sp. RQ2] gi|238688806|sp|B1L821|KTHY_THESQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|170176999|gb|ACB10051.1| dTMP kinase [Thermotoga sp. RQ2] Length = 197 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL ++L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLE---EEVTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R + + I+ L EG +L DR+ DSS AYQG + ++ L +++ Sbjct: 58 KAELFLFLASR-NLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDLA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ LKR L+ FE+++ + H R+ +L +AR Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKREFLEH--VREGYLVLAREH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211 P+R ++D S + + +++ V W+L Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVERRWKL 195 >gi|289548995|ref|YP_003473983.1| thymidylate kinase [Thermocrinis albus DSM 14484] gi|289182612|gb|ADC89856.1| thymidylate kinase [Thermocrinis albus DSM 14484] Length = 199 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 115/209 (55%), Gaps = 18/209 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+G+GKTT L FLQ++ Y + ++PG TP AE R +L +D Sbjct: 1 MLISIEGIDGSGKTTVAHALVDFLQKEGYPAVLFKDPGDTPLAEEIRSLLFKYEMDPI-- 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F AAR I PAL EGKI++ DRF+DS+ AYQG + L I+ Sbjct: 59 -TELLLFEAARSSLTWEKILPALSEGKIVILDRFIDSTVAYQGYGREINLGTVSILNHIA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + P+ T++L++P+ + L R+ +R FER++ + K R ++ +A + Sbjct: 118 TRGIKPNLTLLLNVPLHVALSRLSDR---------SRFEREEYL--RKVRDAYILLAHQE 166 Query: 185 PDRCHIVDSAHS----FQSVATNILNIVW 209 +R IVD++ S F+ V T +L++++ Sbjct: 167 KERIKIVDASRSFEEVFEEVKTEVLSVLY 195 >gi|227486758|ref|ZP_03917074.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172] gi|227235228|gb|EEI85243.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172] Length = 207 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/214 (31%), Positives = 116/214 (54%), Gaps = 12/214 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI FEG +G+GKTT I +K L+ K+Y + REPGGT +E R +++ Sbjct: 2 NGKFIVFEGPDGSGKTTIIKKVKELLENKDYSISYYREPGGTSISEKIRSIIIDNDNYMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA++FA++R V I P L EGKI++CDRF+ SS YQG + L +D+++ Sbjct: 62 DAKTEALLFASSRAQLVAEKITPDLKEGKIVICDRFVMSSLLYQG---LGRALGVDNIKT 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + + PD T+ ++ L+R + +S D E +D H+ ++ Sbjct: 119 INDFATGGLKPDLTLFFNIDYKTALERKRANFS------PDRLENEDFSFHKTIFDGYMK 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A D VD+ S + + +++NI+++L++ Sbjct: 173 MADLYKDEIKKVDARKSIEDLTEDVINIIYQLLE 206 >gi|260905520|ref|ZP_05913842.1| thymidylate kinase [Brevibacterium linens BL2] Length = 904 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 112/208 (53%), Gaps = 8/208 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + +G FI+ EG +G+GK+T I + + L + Y V TREPGGT R VL + Sbjct: 409 LGAGFFIAIEGGDGSGKSTQIKRVSQILADEGYSVEATREPGGTELGRQIRSVLFDS--E 466 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++FAA R HV +++ P+L G I++ DR++DS+ AYQ + + +L Sbjct: 467 PPSPRTEALLFAADRAHHVASLVDPSLDSGNIVITDRYIDSTIAYQAAGRNFDPKTILAL 526 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + Q ++P TI+LD+ ++ R+ R +Y + ++ H++ RQ +L Sbjct: 527 SKWATQGLVPHLTIVLDIDPEVSATRMGKRGE------NNYLDEENQQFHQRVRQTYLTR 580 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +PDR ++D++ S + + IL + Sbjct: 581 AHKEPDRYIVLDASVSEEDLTAEILTAI 608 >gi|329117616|ref|ZP_08246333.1| dTMP kinase [Streptococcus parauberis NCFD 2020] gi|326908021|gb|EGE54935.1| dTMP kinase [Streptococcus parauberis NCFD 2020] Length = 218 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 7/210 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 ++ GL I+FEG +GAGKT+ + L L+ + + ++ TREPGG AE R V+L Sbjct: 8 LSKGLIITFEGPDGAGKTSVLEALLPLLKAEFDKELITTREPGGVAIAEEIREVILDVNN 67 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PA GKI+L DRF+DSS AYQG + Sbjct: 68 TAMDYKTELLLYIAARRQHLVEKVLPAKEAGKIVLMDRFIDSSVAYQGSGRGLDKADIQW 127 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + + V PD T+ D+P +GL R+ +NR L+ E +H+ R +L Sbjct: 128 LNDFATDGVDPDLTLYFDVPSSVGLARIAKNRTHEVNRLDLEKLE-----MHQAVRNGYL 182 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++A+ P+R +D+++ + V ++ N + Sbjct: 183 ELAKENPNRIVTIDASNVLEQVISDAFNAI 212 >gi|90579079|ref|ZP_01234889.1| putative thymidylate kinase [Vibrio angustum S14] gi|90439912|gb|EAS65093.1| putative thymidylate kinase [Vibrio angustum S14] Length = 209 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 12/213 (5%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 G FI EG+EGAGK+T I ++ Q +D TREPGGTP AE R ++ DE Sbjct: 3 GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHDPASTREPGGTPLAEQMRALVKEGHPDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR+ V+NVI+PAL +G+ ++ DR SS AYQG +++L+ Sbjct: 63 LTDMAELLLLYAARIQLVDNVIKPALNQGQWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI +D+ ++GL+R + R LD E+ +V + R FL+++ Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNVDFFHRARARFLELS 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNI---LNIVWEL 211 NQP+ I+D++ S V ++ LN EL Sbjct: 177 ENQPN-VIIIDASQSLDKVTEDLQSALNAWLEL 208 >gi|73667393|ref|YP_303409.1| thymidylate kinase [Ehrlichia canis str. Jake] gi|123614707|sp|Q3YR44|KTHY_EHRCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72394534|gb|AAZ68811.1| thymidylate kinase [Ehrlichia canis str. Jake] Length = 202 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 106/191 (55%), Gaps = 19/191 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSC-GVD 60 +FI+FEGI+G+GKTT LL +L K Y V+ +TREPGGT EA R +L G+D Sbjct: 1 MFITFEGIDGSGKTTQSHLLTEYLS-KIYGVNNVVLTREPGGTLLNEAVRDLLFQAKGLD 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E + F A R +H VI+P+LM+ KI++CDRF+DS+ AYQG + L Sbjct: 60 SL---SELLFFIAMRREHFMKVIKPSLMQKKIVVCDRFIDSTIAYQGYGQGIDCNLICQL 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V ++ PD T ++D+ V L R +C + +E ++ + + R F I Sbjct: 117 NDLVV-DMYPDITFVIDVDVHESLSR----------SCKNGYEFAELEFYYRVRNGFYSI 165 Query: 181 ARNQPDRCHIV 191 P RCHI+ Sbjct: 166 VEKNPHRCHII 176 >gi|223044432|ref|ZP_03614465.1| thymidylate kinase [Staphylococcus capitis SK14] gi|222442221|gb|EEE48333.1| thymidylate kinase [Staphylococcus capitis SK14] Length = 205 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 110/195 (56%), Gaps = 8/195 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ IS + + L + DV TREPGG P E R V+L + Sbjct: 4 FITFEGPEGAGKTSVISKVSQKLA-TDMDVITTREPGGVPTGEEIRRVVLEG--NNMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++D HEK + + + + P Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRVIDSDP 175 Query: 186 DRCHIVDSAHSFQSV 200 +R V++ ++V Sbjct: 176 ERFVKVNADQDLENV 190 >gi|315126343|ref|YP_004068346.1| thymidylate kinase [Pseudoalteromonas sp. SM9913] gi|315014857|gb|ADT68195.1| thymidylate kinase [Pseudoalteromonas sp. SM9913] Length = 208 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG+EGAGK+T I+L + FL + D REPGGTP AE+ R ++ + +E E Sbjct: 5 FIVIEGLEGAGKSTAIALCQDFLNHHHIDFINVREPGGTPLAESLRTLVKAEHQEEIAFE 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR + NVI PAL +G+ +L DR SS AYQG L SL + + Sbjct: 65 TELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSSMVL 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + + PD TI LD+ IGL+R + R LD E++ + ++ R ++++A N Sbjct: 125 KGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYIELA-NDD 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 D VD+ S V +I N++ Sbjct: 178 DSIKTVDANQSIDKVHRDITNVL 200 >gi|303233183|ref|ZP_07319856.1| dTMP kinase [Atopobium vaginae PB189-T1-4] gi|302480768|gb|EFL43855.1| dTMP kinase [Atopobium vaginae PB189-T1-4] Length = 207 Score = 115 bits (289), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 7/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G GKTT + L +R V REPGGT +EA R ++L+ + Sbjct: 1 MFITFEGIDGCGKTTQVKRLVSAFRRAGNKVVSLREPGGTTISEAIRSMVLNPAMSSMCN 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E +++ AAR V VI PAL +++CDR+ DS++AYQ + E+ Sbjct: 61 ETELLLYEAARAQLVREVIEPALARDVVVVCDRYADSTFAYQYAARGLDKELVCRANELG 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V+PD TI+LD+ VD +R + +C D E++ + R ++++AR Sbjct: 121 SCGVVPDITIVLDMDVDTAYRRATAQ------SC-DRLEQEGREFQTRVRNGYIELARLY 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P+R H++ + Q+V I ++ E Sbjct: 174 PERVHLIGGDDTPQAVFNRICVVLGE 199 >gi|325266947|ref|ZP_08133618.1| dTMP kinase [Kingella denitrificans ATCC 33394] gi|324981688|gb|EGC17329.1| dTMP kinase [Kingella denitrificans ATCC 33394] Length = 218 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 113/216 (52%), Gaps = 10/216 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+G+GKTT +++++ + + V TREPGGTP E R +LL Sbjct: 7 FITLDGIDGSGKTTQLNVIREWFAARKMPVVFTREPGGTPLGEKLRELLLDPQT-RVSLR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E+V+ PAL +G ++ DRF D+++AYQG ++ L++ Sbjct: 66 TETLLMFAARRQHLEDVVLPALAQGIHVVSDRFTDATFAYQGGGRGLPTAEVEVLEDWVQ 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI+LD+P+++ + R++ S D FER+D + R +L A P Sbjct: 126 GSLRPDLTILLDVPLEVSVARIEG------SRDKDRFEREDSAFFARVRAAYLQRAAQSP 179 Query: 186 DRCHIVDSAHSFQSVATNI---LNIVWELVQKRVSP 218 R +++S V +I LN ++ + P Sbjct: 180 QRYAVINSHRDKAEVKQDIEAVLNRLFRFAETEKQP 215 >gi|253996507|ref|YP_003048571.1| thymidylate kinase [Methylotenera mobilis JLW8] gi|253983186|gb|ACT48044.1| thymidylate kinase [Methylotenera mobilis JLW8] Length = 201 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 112/204 (54%), Gaps = 11/204 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG++GAGK+THI+ + + L + +V TREPGGT E R +LL D E Sbjct: 5 FITLEGMDGAGKSTHIADIIKALSARGVEVVSTREPGGTELGERLRELLLH---DAMHPE 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR +H+ NVI PAL G +L DRF D++YAYQ ++ L E+ V Sbjct: 62 TETLLMFAARREHIANVIAPALARGAYVLSDRFTDATYAYQCGAKGVLASKIEQL-ELWV 120 Query: 126 QEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 QE + PD T++ D+PV++ ++R L + D FER+ + R +L A+ Sbjct: 121 QESLQPDLTLLFDVPVEVSMQR------LSAARAPDKFERESADFFTRIRNAYLQRAQQN 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 P R ++DS VA +++ + Sbjct: 175 PARFKVIDSNRPLDEVAQSVMQAI 198 >gi|319898025|ref|YP_004136222.1| thymidylate kinase [Haemophilus influenzae F3031] gi|317433531|emb|CBY81914.1| thymidylate kinase [Haemophilus influenzae F3031] Length = 219 Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKYETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTAKAELLMLYAARVQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLGFFHRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ P + ++++ + V +I Sbjct: 185 KDNP-KAVVINAEQRIELVQADI 206 >gi|186686536|ref|YP_001869732.1| thymidylate kinase [Nostoc punctiforme PCC 73102] gi|238691253|sp|B2IZE7|KTHY_NOSP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|186468988|gb|ACC84789.1| thymidylate kinase [Nostoc punctiforme PCC 73102] Length = 211 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I FEG+EG GKT+ + L ++L+ V VTREPGGT R +LL D+ Sbjct: 2 GGKLIVFEGVEGCGKTSQMQLCSQWLESLGVSVVVTREPGGTELGLHLRRLLLEKAEDKP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E +++AA R HVE ++P L GK +LCDR+ DS+ AYQG ++ L Sbjct: 62 VAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTIAYQGYGRGLNMSLINQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ + D TI LD+ V++GL R + + LD E++ + H + +Q + ++A Sbjct: 122 YIATAGLESDLTIWLDIDVEVGLTRKRG-----DGIALDRIEQETIAFHRRVQQGYAELA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + P R VD + S ++V I I+ Sbjct: 177 ASYPSRIVRVDGSLSKEAVQQVIQEIL 203 >gi|317486321|ref|ZP_07945152.1| thymidylate kinase [Bilophila wadsworthia 3_1_6] gi|316922432|gb|EFV43687.1| thymidylate kinase [Bilophila wadsworthia 3_1_6] Length = 208 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 2/197 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEG+GKTT I L + N++V VTREPGG R +LL+ E Sbjct: 1 MFITLEGIEGSGKTTLIENLADVFRTLNHEVLVTREPGGCALGRELRQMLLNPET-EICP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE +F A R HV VIRPAL G+++LCDR+ DS+ YQG L SL +++ Sbjct: 60 EAELFLFLADRAQHVAEVIRPALKRGEVVLCDRYADSTVVYQGYGRGLDIEKLRSLNDVA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T +LD+ LKR + R + L S FE + + H + R+ F A + Sbjct: 120 IGGLWPDRTFVLDMDPADALKRARRRNAELGLSEKEGRFEAEQMPFHTRIREGFKLWAAH 179 Query: 184 QPDRCHIVDSAHSFQSV 200 R ++D+A S + + Sbjct: 180 NTKRIVVLDAADSPEGL 196 >gi|303325943|ref|ZP_07356386.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3] gi|302863859|gb|EFL86790.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3] Length = 217 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 118/214 (55%), Gaps = 5/214 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEGIEG+GK+T LL LQ YD +TREPGG + R +LL + Sbjct: 1 MFISFEGIEGSGKSTAQRLLAEHLQGLGYDPLLTREPGGCALGRSLRPILLDARTRGLSS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R HV VIRPAL G+ +LCDR+ DS+ AYQG L + +++ Sbjct: 61 RAELYLFLADRAQHVAEVIRPALEAGQTVLCDRYADSTLAYQGYGRGLDPEHLRRINDMA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIFLDIA 181 +MPD T++LDLPV GL+R R RE + F+ + + HE+ RQ + +A Sbjct: 121 TGGLMPDLTLLLDLPVHCGLERAGLRN--REEGTVLSEGRFDAESLEFHERVRQGYRSLA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R I+D+A + V L+ V +++R Sbjct: 179 AEEPERFAIIDAAQPPEDVVLQCLSAVEASLRQR 212 >gi|226226593|ref|YP_002760699.1| thymidylate kinase [Gemmatimonas aurantiaca T-27] gi|226089784|dbj|BAH38229.1| thymidylate kinase [Gemmatimonas aurantiaca T-27] Length = 237 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 7/186 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+ EG EG GKTT + L L+ ++V REPGGT A +A R +LL Sbjct: 14 GLFVVLEGGEGVGKTTQWNRLASALRAVGHEVVAVREPGGTQAGDAIRTLLLDP-TSSLS 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA+R V +V+ PAL G ++L DRFL S+YAYQG L S+ + Sbjct: 73 PGTEALLFAASRAQLVADVVEPALARGAVVLVDRFLLSTYAYQGAGRGLPLDMLSSVNRL 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T++L++P+D+ + RVQ R D E +D H + + F+ + Sbjct: 133 ATGGRAPDLTLLLNVPLDLAMARVQAR------GAADRMELEDAAFHVRVQAAFVAALSS 186 Query: 184 QPDRCH 189 + H Sbjct: 187 TWQQAH 192 >gi|302388610|ref|YP_003824431.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646] gi|302199238|gb|ADL06808.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646] Length = 211 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 16/209 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+ EG +GAGKTT + ++L+ K V TREPGGT E R VLL D Sbjct: 5 LRKGKFITIEGPDGAGKTTQAEKIVQYLKSKGKRVISTREPGGTALGEQLRKVLL----D 60 Query: 61 EFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G+ AEA+++AA R +E ++ PAL EG ++CDRF+DSS AYQG + Sbjct: 61 PEGSPVSNAEALIYAACRAQLLERMVIPALREGFTVVCDRFVDSSLAYQGWARGIGINRI 120 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L + + PD TI+LD+ + L R V R ES L++ H+K R+ Sbjct: 121 LQLNKWVIGSYWPDITILLDVDPAVSLGRLVGGRKDRLESEALEF--------HQKVREG 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNIL 205 ++ + PDR I+D++ V I+ Sbjct: 173 YMKVREMFPDRIRIIDASQPADEVFRQIV 201 >gi|302336221|ref|YP_003801428.1| thymidylate kinase [Olsenella uli DSM 7084] gi|301320061|gb|ADK68548.1| thymidylate kinase [Olsenella uli DSM 7084] Length = 231 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 7/210 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G ++ EGI+G GK+T +LL L+ ++V REPGGT +E R +LL DE Sbjct: 29 GRLVTLEGIDGCGKSTQAALLADHLEASGHEVVCLREPGGTAVSEKIRQLLLDPVNDEMA 88 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E +++ A+R V VI PAL G +++CDR+ DS+YAYQ ++ E+ Sbjct: 89 DECELLLYEASRAQLVRQVIEPALERGAVVVCDRYFDSTYAYQHGGRGLDRTLVERCNEL 148 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 PD T++ DL + R D E + E+ R +LD+A Sbjct: 149 GSCGRRPDVTLVFDLDPTVAFARATQ-------GGRDRLEGAGLRFQERVRASYLDLAAK 201 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R ++D+ S V L ++ ++++ Sbjct: 202 EPARVRVIDATGSADEVGRRALLVLADVLR 231 >gi|307544593|ref|YP_003897072.1| thymidylate kinase [Halomonas elongata DSM 2581] gi|307216617|emb|CBV41887.1| thymidylate kinase [Halomonas elongata DSM 2581] Length = 217 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 118/206 (57%), Gaps = 2/206 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62 G FI+ EG EG GK+T+++L+ L+ + +V TREPGGTP AEA R +LL DE Sbjct: 5 GRFITLEGGEGVGKSTNLALVADHLEARGLEVVRTREPGGTPRAEAIRKLLLDPAADEPL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR H+ V+RPAL G ++CDRF D+++AYQG + L+ Sbjct: 65 DDDAELLLVFAARAQHLARVVRPALERGAWVVCDRFTDATFAYQGGGRGIDTARIAELEA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD+P+ +R++ R R+ D FER+ + R+ +L+ A Sbjct: 125 FVQRGLTPDLTLLLDMPMAAAQRRLEGRLD-RDGGQRDRFERERAEFFDAVRRAYLERAD 183 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++V++ +V + +++ Sbjct: 184 EAPERVYVVNADQPLDAVQDELKSLL 209 >gi|293399977|ref|ZP_06644123.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306377|gb|EFE47620.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 211 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+FEG +G+GKTT + L Y V TREPGG AE RHV+L Sbjct: 2 MKKGLFITFEGNDGSGKTTISKMAYEKLLDMGYPVVYTREPGGIDIAEQIRHVILDPKNT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA+++AA+R H+ + PAL + +I+LCDRF+DSS YQG + + Sbjct: 62 AMDARCEALLYAASRRQHLVEKVLPALAKHQIVLCDRFVDSSLVYQGIARGIGIEEVYKI 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ +PD TI L + + GL R++ R D + + + H+ + + I Sbjct: 122 NEFAIEGHLPDATIFLHVDLHTGLSRIETR------GEKDRLDNESMKFHQMVSEGYDTI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R H++D+ S + V + + E++ Sbjct: 176 REMFHERMHVIDATKSIEDVLKATIECLLEIIN 208 >gi|148270766|ref|YP_001245226.1| dTMP kinase [Thermotoga petrophila RKU-1] gi|166223125|sp|A5IN77|KTHY_THEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147736310|gb|ABQ47650.1| thymidylate kinase [Thermotoga petrophila RKU-1] Length = 197 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL R+L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R + + I+ L EG ++L DR+ DSS AYQG + ++ L + + Sbjct: 58 KAELFLFLASR-NLLVMEIKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ L R L+ FE+++ + E+ R+ +L +A+ Sbjct: 117 TDSLVPDLTFYIDVDVETALNR---------KGELNRFEKREFL--ERVREGYLVLAKEH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211 P+R ++D S + + +++ V W+L Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVERRWKL 195 >gi|148827653|ref|YP_001292406.1| thymidylate kinase [Haemophilus influenzae PittGG] gi|254808296|sp|A5UGW7|KTHY_HAEIG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148718895|gb|ABR00023.1| thymidylate kinase [Haemophilus influenzae PittGG] Length = 210 Score = 115 bits (288), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 113/203 (55%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ P + ++++ S + V +I Sbjct: 176 KDNP-KAVMINAEQSIELVQADI 197 >gi|297159269|gb|ADI08981.1| putative thymidylate kinase [Streptomyces bingchenggensis BCW-1] Length = 1080 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 11/217 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI EG +GAGKTT + L +++ K ++V VTREPG T + R +LL Sbjct: 499 TGFFIVVEGGDGAGKTTQVEALAEWIRGKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 558 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G +++ DR++DSS AYQG + + Sbjct: 559 SHRAEALLYAADRAEHVDSVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 618 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 619 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHQRVRNGFLTLAA 670 Query: 183 NQPDRCHIVDSAH---SFQSVATNILNIVWELVQKRV 216 P R +VD+ + +V + L++V L + V Sbjct: 671 ADPARYLVVDAGQLPEAVTAVVRHRLDLVLPLSEAEV 707 >gi|260584572|ref|ZP_05852318.1| dTMP kinase [Granulicatella elegans ATCC 700633] gi|260157595|gb|EEW92665.1| dTMP kinase [Granulicatella elegans ATCC 700633] Length = 211 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/199 (35%), Positives = 103/199 (51%), Gaps = 4/199 (2%) Query: 9 FEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 EG +GAGKTT I L L+ R N + TREPGG+ AE R ++L E E Sbjct: 1 MEGPDGAGKTTVIEKLIPLLEERTNVTITSTREPGGSRIAEDIRQIILDVQNVEMDVRTE 60 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 AI++AAAR H+ + I P L +G I+ CDRF+DSS YQG + L + + Sbjct: 61 AILYAAARRQHLTDRILPNLEKGGIVFCDRFVDSSLVYQGVARGIGIEEVYQLNQFATAG 120 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 PD T+ LD+P +IGL+R+ R+ D +++ + H+ RQ +LDI P+R Sbjct: 121 KTPDVTLYLDVPAEIGLERIHLAKGNRQ---FDRLDQEGLQFHKMVRQGYLDIIPTDPER 177 Query: 188 CHIVDSAHSFQSVATNILN 206 +D+ + V L Sbjct: 178 FIQIDATKTVDEVVQECLT 196 >gi|319399639|gb|EFV87893.1| thymidylate kinase [Staphylococcus epidermidis FRI909] Length = 203 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 12/197 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI+FEG EGAGKT S++K +R K YD+ TREPGG +E R ++L + Sbjct: 4 FITFEGPEGAGKT---SVIKEVSERLAKEYDIVTTREPGGVLTSEEIRRIVLDG--ESID 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA+R +H+ I P+L KI+LCDR++DSS AYQG + L E Sbjct: 59 IRTEAMLFAASRREHLVEKIIPSLQADKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEF 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD TI LD+ +IG +R+ L+ + + +++D + HEK + + + + Sbjct: 119 AINGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISD 173 Query: 184 QPDRCHIVDSAHSFQSV 200 P R V++ HS V Sbjct: 174 NPHRFIKVNANHSLDKV 190 >gi|309972387|gb|ADO95588.1| Thymidylate kinase [Haemophilus influenzae R2846] Length = 219 Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ P + ++++ S + V +I Sbjct: 185 KDNP-KAVMINAEQSIELVQADI 206 >gi|300691472|ref|YP_003752467.1| thymidylate kinase [Ralstonia solanacearum PSI07] gi|299078532|emb|CBJ51187.1| thymidylate kinase [Ralstonia solanacearum PSI07] Length = 205 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 109/198 (55%), Gaps = 13/198 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL +I R L ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHS 196 A +P+R I+D+A + Sbjct: 173 RRAAAEPERFVIIDAARA 190 >gi|148825264|ref|YP_001290017.1| thymidylate kinase [Haemophilus influenzae PittEE] gi|229846542|ref|ZP_04466650.1| thymidylate kinase [Haemophilus influenzae 7P49H1] gi|254808295|sp|A5UA33|KTHY_HAEIE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148715424|gb|ABQ97634.1| thymidylate kinase [Haemophilus influenzae PittEE] gi|229810635|gb|EEP46353.1| thymidylate kinase [Haemophilus influenzae 7P49H1] Length = 210 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ P + ++++ S + V +I Sbjct: 176 KDNP-KAVMINAEQSIELVQADI 197 >gi|145630365|ref|ZP_01786146.1| thymidylate kinase [Haemophilus influenzae R3021] gi|144984100|gb|EDJ91537.1| thymidylate kinase [Haemophilus influenzae R3021] Length = 219 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 12 GKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEPV 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 72 TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD TI LD+ +GL R + R LD E+ D+ + R +L + + Sbjct: 132 TVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRASYLALVK 185 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 186 DNP-KAVMINAEQSIELVQADIESAV 210 >gi|154249383|ref|YP_001410208.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1] gi|171769338|sp|A7HKW8|KTHY_FERNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|154153319|gb|ABS60551.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1] Length = 197 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 11/203 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+SFEGI+G GK+T ++LL +L+ K REPGGT E R +L++ E A Sbjct: 1 MFVSFEGIDGCGKSTQVNLLVNYLEEKGIPYIKVREPGGTHLGEKIRELLIT---QEMCA 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE+VI+PAL GKI++ DRF SS AYQG + L + + Sbjct: 58 RSELLLFLASRAQLVESVIKPALKNGKIVIADRFAHSSVAYQGCGRELGPETVKILNDFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +D+PV++ ++R++N++ D E++ E R +L +A+ Sbjct: 118 TDKTYPDIVFYIDVPVNVAMERMKNQHK-------DRIEKEGKEFWESIRNCYLKMAKEN 170 Query: 185 PDRCHIVDSAHSFQSVATNILNI 207 + I+D + + + I+ + Sbjct: 171 ENFV-IIDGTRTIEEIHREIVKV 192 >gi|304321770|ref|YP_003855413.1| thymidylate kinase [Parvularcula bermudensis HTCC2503] gi|303300672|gb|ADM10271.1| thymidylate kinase [Parvularcula bermudensis HTCC2503] Length = 209 Score = 115 bits (287), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 83/205 (40%), Positives = 117/205 (57%), Gaps = 11/205 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I+LL L+ V +TREPGGTP EA R VLL+ + Sbjct: 5 GRFITFEGPEGAGKSTQIALLAERLRSAGEAVTMTREPGGTPGGEALRDVLLNPAAT-WS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++ AAR H++ +I PAL G+ +LCDRF S+ AYQG+ + + L + E Sbjct: 64 PLAEALLMNAARDAHMQTLILPALQRGETVLCDRFAASTLAYQGDGVAPETL---AALEA 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V PD ++LDLPV GL R + R + D FE + + HE R FL++A Sbjct: 121 AVVVRRPDLVLLLDLPVAEGLARAKARST------ADRFEGRRLDYHEGVRARFLELAAK 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+ H +D+A V+ IL ++ Sbjct: 175 DPN-MHCIDAAQPQDDVSAAILEVM 198 >gi|261822056|ref|YP_003260162.1| thymidylate kinase [Pectobacterium wasabiae WPP163] gi|261606069|gb|ACX88555.1| thymidylate kinase [Pectobacterium wasabiae WPP163] Length = 219 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 121/217 (55%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT +++ L+ +V TREPGGTP AE R ++ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMA 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R R+ LD E++ + ++ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRA------RQRGELDRIEQESLAFFDRTRFRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A + D +D+A S +V+ +I + + +Q++ Sbjct: 174 ELA-AEDDSILTIDAAQSIDAVSADIQAALQQWLQRQ 209 >gi|281413072|ref|YP_003347151.1| thymidylate kinase [Thermotoga naphthophila RKU-10] gi|281374175|gb|ADA67737.1| thymidylate kinase [Thermotoga naphthophila RKU-10] Length = 197 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL R+L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R + + I+ L EG ++L DR+ DSS AYQG + ++ L + + Sbjct: 58 KAELFLFLASR-NLLVMEIKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ L R L+ FE+++ + E+ R+ +L +A+ Sbjct: 117 TDGLVPDLTFYIDVDVETALNR---------KGELNRFEKREFL--ERVREGYLVLAKEH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIV---WEL 211 P+R ++D S + + +++ V W+L Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVERRWKL 195 >gi|326328861|ref|ZP_08195195.1| dTMP kinase [Nocardioidaceae bacterium Broad-1] gi|325953346|gb|EGD45352.1| dTMP kinase [Nocardioidaceae bacterium Broad-1] Length = 216 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 9/214 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F+ FEG EG+GK+T LL L + + V +T EPG T + R ++LS + Sbjct: 11 GVFVCFEGGEGSGKSTQSRLLHEALTARGHRVLLTFEPGDTAVGKDVRRIVLSPETGDLD 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA + +H+E+++RPAL G++++ DR++DS AYQG L+ + Sbjct: 71 DRTEALLFAADKAEHIESMVRPALERGEVVITDRYVDSMLAYQGAGRVLDAAQLEEVARW 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ P T++LDL G R + R D E++ HE+ R F+ +A Sbjct: 131 ATADLRPHLTVLLDLDPTAGFTRFEER---------DRMEQESQQFHERVRSAFVALAER 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 PD ++D+ + + +L + L+ + V+ Sbjct: 182 NPDHYLVLDARAPVEEIHAAVLARLEPLLDQAVT 215 >gi|56808246|ref|ZP_00366017.1| COG0125: Thymidylate kinase [Streptococcus pyogenes M49 591] gi|209558885|ref|YP_002285357.1| thymidylate kinase [Streptococcus pyogenes NZ131] gi|229621844|sp|B5XK00|KTHY_STRPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|209540086|gb|ACI60662.1| Thymidylate kinase [Streptococcus pyogenes NZ131] Length = 211 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLTKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREINRLDL---ETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|312796386|ref|YP_004029308.1| Thymidylate kinase [Burkholderia rhizoxinica HKI 454] gi|312168161|emb|CBW75164.1| Thymidylate kinase (EC 2.7.4.9) [Burkholderia rhizoxinica HKI 454] Length = 218 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 81/215 (37%), Positives = 108/215 (50%), Gaps = 19/215 (8%) Query: 4 GLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G FI+FEGI+GAGKTTH++ L R+ V VTREPGGTP EA R +LL Sbjct: 16 GKFITFEGIDGAGKTTHLTWFCDRLSERAARQGASVIVTREPGGTPLGEALRDILLR--- 72 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA++ AAR +H+ VI P L G +L DRF D+++AYQG + L +D Sbjct: 73 QPMHLETEALLMFAARREHIAAVIEPTLARGDWVLSDRFTDATFAYQG---GGRGLSIDK 129 Query: 120 LQ--EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ E VQ + PD T++ D+P + R R R D FE + + R Sbjct: 130 LQVLEQWVQAGLQPDRTVLFDVPTETASAR---RGGARAP---DKFESESDAFFARTRAE 183 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L P R IVD+ S V + I+ L Sbjct: 184 YLRRTAQAPARFAIVDATCSIAEVREQLEAILLTL 218 >gi|187928511|ref|YP_001898998.1| thymidylate kinase [Ralstonia pickettii 12J] gi|229470189|sp|B2UBZ3|KTHY_RALPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187725401|gb|ACD26566.1| dTMP kinase [Ralstonia pickettii 12J] Length = 205 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 13/210 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + LQ K V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L+ Q + P TI+ DL +I R L ++ D FE + + R +L Sbjct: 119 ALEHWVQQGLQPTKTILFDLAPEIAAAR------LADARTPDKFEAESAQFFLRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +PDR ++++ + ++ N++ Sbjct: 173 RRAAAEPDRFVVLNANRERSDIQKDLENLL 202 >gi|315229969|ref|YP_004070405.1| thymidylate kinase [Thermococcus barophilus MP] gi|315182997|gb|ADT83182.1| thymidylate kinase [Thermococcus barophilus MP] Length = 209 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 119/211 (56%), Gaps = 18/211 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+FI EGI+GAGK+T LL ++ +++ Y+V +T+EP T + R ++L+ G + Sbjct: 2 GIFIVIEGIDGAGKSTQAKLLAKWFEKRGYNVVLTKEPTDTAFGKLIRKLVLTGGREGII 61 Query: 61 ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + EAEA++FAA R +HV+ +I P+L GK+++ DR+ SS AYQ R L L Sbjct: 62 DGAKISHEAEALLFAADRAEHVKKLIEPSLRTGKVVISDRYFYSSLAYQWARG----LDL 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L ++ + PD I+LDLPV +KR+ R E F+R + +K R+ + Sbjct: 118 EWLINLNKFAIRPDLVILLDLPVKESMKRINGRQLKSE------FDR-IAELQKKVRENY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L + P+ IV++ S + + +I+ +V Sbjct: 171 LKLVEMFPE-MKIVNALASIEDIHNDIVALV 200 >gi|319787591|ref|YP_004147066.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1] gi|317466103|gb|ADV27835.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1] Length = 223 Score = 114 bits (286), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 113/217 (52%), Gaps = 12/217 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------V 59 +S EG EGAGK+T ++ ++ L + ++V TREPGGTP AE R +LL+ Sbjct: 11 LVSLEGGEGAGKSTALAAVRELLAARGHEVVQTREPGGTPLAERIRELLLARSAPGQDVA 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E ++ AAR HV V+RPAL G ++ DRF DSSYAYQG ++ Sbjct: 71 EPLHPQTELLLMFAARAQHVAEVVRPALERGAFVVSDRFTDSSYAYQGAGRGLDPRWIAD 130 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L++ +V + P T++LDL V G R R D E + E+ R+ F Sbjct: 131 LEQRTVG-MRPGLTLLLDLDVRQGRARTSGR-----DLFPDRIESEQDEFFERVRRGFRQ 184 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A+ +P+R ++D+A Q+V ++ V + ++V Sbjct: 185 RAQAEPERFALIDAAQPPQAVGHDVAAAVAAWLDRQV 221 >gi|194334267|ref|YP_002016127.1| dTMP kinase [Prosthecochloris aestuarii DSM 271] gi|238693337|sp|B4S8U3|KTHY_PROA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|194312085|gb|ACF46480.1| dTMP kinase [Prosthecochloris aestuarii DSM 271] Length = 223 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 8/218 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+GAGK+T + +L++ L K +V REPGGT +E+ R +LL D Sbjct: 1 MFITFEGIDGAGKSTQVKMLRKLLISKGLEVLTLREPGGTDISESIRDILLEVKND-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++FAA+R + V+ VI+PAL + +L DRF DS+ AYQG L + I+ Sbjct: 60 IGELLLFAASRAELVQKVIKPALSDHATVLLDRFYDSTSAYQGYGRGLDLALLHQINRIA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LDL + + R + SL E LD ER + + + R + IA Sbjct: 120 SCSLEPDITFYLDLSPEDAMIRKFSEKSLPLAFEDEELDRMERSGLEFYTRVRNGYQTIA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW----ELVQKR 215 +QP R +D+ ++ I + L+QK+ Sbjct: 180 ASQPRRVVTIDATLEPDAIHRKITETIMSRRGSLLQKK 217 >gi|300723625|ref|YP_003712930.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061] gi|297630147|emb|CBJ90784.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061] Length = 209 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 81/220 (36%), Positives = 119/220 (54%), Gaps = 16/220 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT I + L++ D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTAIQTVAETLKQYGISDLIFTREPGGTPLAEKLRQ-LIKQGI 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +AE ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 59 EGERLTDKAEVLMIYAARVQLVENVIKPALSKGTWVVGDRHDLSSQAYQGGGRGIDQNLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQ 175 SL++ ++ PD TI LDLP ++GL+R + R L E LD+F H R + Sbjct: 119 ASLRDSALGCFYPDLTIYLDLPPEVGLERARERGELDRIEKESLDFF-------HRTRAR 171 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A N D +D+ S + V +I + + + +Q++ Sbjct: 172 YLELVAAN--DSIKKIDATQSLEKVRADIRHTLLQWLQEQ 209 >gi|227495669|ref|ZP_03925985.1| thymidylate kinase [Actinomyces coleocanis DSM 15436] gi|226830901|gb|EEH63284.1| thymidylate kinase [Actinomyces coleocanis DSM 15436] Length = 243 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 65/219 (29%), Positives = 122/219 (55%), Gaps = 15/219 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL+I+FEG E GKTT I L + +L+ Y + V+REPGGT + R+++L G + Sbjct: 21 GLYITFEGGEACGKTTQIELTQNWLRDLGYQLTVSREPGGTELGQQLRNLILH-GPKDID 79 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++ A R HV IRPAL G++++ DR+ DS+ AYQG +++ L + ++++ Sbjct: 80 PRCEVLLYLADRAYHVATKIRPALEAGQVVVQDRYFDSAVAYQG---AARKLGVSEVRDL 136 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V+ ++P+ T +LD+ + ++ R + D E + H K R+ +L + Sbjct: 137 NLWAVEGLIPEITFLLDIDPRVSMQ--------RRAGATDRIEEEPSAFHIKVREQYLAL 188 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 A +P R H+++++ S + + I ++ ++K+ L Sbjct: 189 AAAEPQRFHVLNASDSIEELQAQIREVLLGALEKKTGLL 227 >gi|145632722|ref|ZP_01788456.1| thymidylate kinase [Haemophilus influenzae 3655] gi|145634547|ref|ZP_01790256.1| thymidylate kinase [Haemophilus influenzae PittAA] gi|229844384|ref|ZP_04464524.1| thymidylate kinase [Haemophilus influenzae 6P18H1] gi|144986917|gb|EDJ93469.1| thymidylate kinase [Haemophilus influenzae 3655] gi|145268092|gb|EDK08087.1| thymidylate kinase [Haemophilus influenzae PittAA] gi|229812633|gb|EEP48322.1| thymidylate kinase [Haemophilus influenzae 6P18H1] Length = 210 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+N+I+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ P + ++++ S + V +I Sbjct: 176 KDNP-KAVMINAEQSIELVQADI 197 >gi|170703706|ref|ZP_02894432.1| dTMP kinase [Burkholderia ambifaria IOP40-10] gi|171319768|ref|ZP_02908855.1| dTMP kinase [Burkholderia ambifaria MEX-5] gi|170131388|gb|EDS99989.1| dTMP kinase [Burkholderia ambifaria IOP40-10] gi|171095004|gb|EDT40029.1| dTMP kinase [Burkholderia ambifaria MEX-5] Length = 206 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAASGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVL 203 >gi|330446410|ref|ZP_08310062.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490601|dbj|GAA04559.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 209 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 112/200 (56%), Gaps = 9/200 (4%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 G FI EG+EGAGK+T I+ ++ Q D TREPGGTP AE R ++ DE Sbjct: 3 GKFIVIEGLEGAGKSTAINQVMDTLAQHGINDPVSTREPGGTPLAEQMRALVKEGHPDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG +++L+ Sbjct: 63 LTDMAELLLLYAARIQLVDNVIKPALNQGKWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI +D+ ++GL+R + R LD E+ ++ + R FL+++ Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRVRARFLELS 176 Query: 182 RNQPDRCHIVDSAHSFQSVA 201 NQP+ I+D++ + + V Sbjct: 177 ENQPN-VIIIDASQTLEQVT 195 >gi|295397256|ref|ZP_06807352.1| thymidylate kinase [Aerococcus viridans ATCC 11563] gi|294974503|gb|EFG50234.1| thymidylate kinase [Aerococcus viridans ATCC 11563] Length = 219 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 4/207 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+ EG +GAGKTT I L L+ K + +TREPGG P AE R V+LS Sbjct: 7 AGKFITVEGPDGAGKTTLIQGLTAKLEEKLAVPLKLTREPGGDPIAEQIREVILSPENVA 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA+R H+ + + PAL G ++LCDRF+DSS AYQG + ++ Sbjct: 67 LDPRAEALLYAASRRQHLVHTVLPALEAGHMVLCDRFVDSSIAYQGYGREIGEEGIIAIN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ LD+ + G++R+Q S E LD + + H++ + + + Sbjct: 127 QFATDGRQPDLTLYLDITAEEGIRRIQANRSQAEQNRLDV---EAIDFHQRVHKGYGVLK 183 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++D+ +S+ + L I+ Sbjct: 184 DRFPERIQVIDATQDPESMQRDALAIL 210 >gi|115351881|ref|YP_773720.1| thymidylate kinase [Burkholderia ambifaria AMMD] gi|172060851|ref|YP_001808503.1| thymidylate kinase [Burkholderia ambifaria MC40-6] gi|122323022|sp|Q0BEN7|KTHY_BURCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487583|sp|B1YRL3|KTHY_BURA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|115281869|gb|ABI87386.1| thymidylate kinase [Burkholderia ambifaria AMMD] gi|171993368|gb|ACB64287.1| dTMP kinase [Burkholderia ambifaria MC40-6] Length = 206 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVL 203 >gi|254252184|ref|ZP_04945502.1| Thymidylate kinase [Burkholderia dolosa AUO158] gi|124894793|gb|EAY68673.1| Thymidylate kinase [Burkholderia dolosa AUO158] Length = 206 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH++ LQ+K V VTREPGGT E R ++L+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLNWFCERLQQKLAAAGRHVVVTREPGGTQLGETLRDIVLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---APDKFESESDAFFARTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 172 YLRRAEEAPHRFVIVDATQSIAEIRQQLERVL 203 >gi|148651943|ref|YP_001279036.1| dTMP kinase [Psychrobacter sp. PRwf-1] gi|226732663|sp|A5WBP5|KTHY_PSYWF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148571027|gb|ABQ93086.1| thymidylate kinase [Psychrobacter sp. PRwf-1] Length = 208 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 6/169 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G F+SFEG EG GKTT I+ L LQ + + TREPGG+P AE R +LL Sbjct: 1 MSLGKFVSFEGTEGVGKTTAINGLCERLQAQGIEYVRTREPGGSPFAEQLRELLLDTRT- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDS 119 + + E ++ AAR DH+ VI PAL GK ++CDRF+DS+ AYQG R L Sbjct: 60 QINDDTELLLMFAARSDHLAQVIMPALSAGKWVICDRFIDSTVAYQGYGRGFGNADMLHK 119 Query: 120 LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 ++ + V +PD T+ LDLPV G++R R E LD+F+R Sbjct: 120 IEALIAGFVPRLPDITLWLDLPVAEGMQRAGKRSVADRFEQQQLDFFDR 168 >gi|113461628|ref|YP_719697.1| thymidylate kinase [Haemophilus somnus 129PT] gi|123031486|sp|Q0I5J0|KTHY_HAES1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|112823671|gb|ABI25760.1| thymidylate kinase [Haemophilus somnus 129PT] Length = 210 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 81/221 (36%), Positives = 124/221 (56%), Gaps = 16/221 (7%) Query: 1 MNSGLFISFEGIEGAGKT-THISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EG+EGAGK+ TH ++ + ++V TREPGGTP AE R+ L+ V Sbjct: 1 MKTGKFIVIEGLEGAGKSSTHQVVVNTLKEFGIHEVVFTREPGGTPLAEKLRY-LIKHEV 59 Query: 60 DEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL 117 +E A+AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQ G R QHL + Sbjct: 60 EELVTAKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDLSSQAYQGGGRGLDQHL-M 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQ 175 +L+ + + PD T+ LD+ +IGL RV+ R L E LD+F R R Sbjct: 119 TTLKNAVLGDFKPDFTLYLDIEPEIGLARVRGRGELDRIEQQNLDFFHRT--------RA 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +L + + P+ ++++ + V +I V + +++ V Sbjct: 171 RYLQLVQQDPNAV-LINADQPIELVQQDIRKAVQKFIEENV 210 >gi|309800190|ref|ZP_07694374.1| thymidylate kinase [Streptococcus infantis SK1302] gi|308116178|gb|EFO53670.1| thymidylate kinase [Streptococcus infantis SK1302] Length = 212 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + + L+ + +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEAIIPILEDRGIEVLSTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 EMDPKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDKKAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ D+ V+ GL R+ S RE LD + + +H K RQ +L + Sbjct: 121 NEFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREINRLDM---EGLDLHRKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + DR +D++ V N ++++ Sbjct: 177 LEKEADRIVKIDASLPLDQVIANTQQLLFD 206 >gi|327334819|gb|EGE76530.1| dTMP kinase [Propionibacterium acnes HL097PA1] Length = 214 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDGVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|193216174|ref|YP_001997373.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110] gi|193089651|gb|ACF14926.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110] Length = 226 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 115/207 (55%), Gaps = 6/207 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+FEGI+G+GK+T I LLK FLQ + ++V REPGG P AE R +LL +E Sbjct: 7 GFLITFEGIDGSGKSTQIKLLKDFLQSRGFEVLSLREPGGVPVAEQIRAILLE-NKNEIN 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++F+A+R V+ VI PAL + ++++ DRF DS+ AYQG + + EI Sbjct: 66 PIAELLLFSASRAALVQAVIIPALEQRQVVVLDRFYDSTVAYQGYGRGISLERIHQINEI 125 Query: 124 SVQEVMPDCTIILDL-PVDIGLKRVQNR---YSLRESAC-LDYFERKDVMIHEKRRQIFL 178 + ++P+ T DL P D L++ + S +++ LD ER + ++ R + Sbjct: 126 ASFGLLPNLTFYFDLQPEDALLRKFSEKSLPLSFKDNEIPLDRMERAGLEFFQRVRTGYK 185 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNIL 205 ++ + P+R + +D+ S + ++ Sbjct: 186 ELVQTAPERFYEIDALCSISEIHQKVV 212 >gi|294155947|ref|YP_003560331.1| dTMP kinase [Mycoplasma crocodyli MP145] gi|291600094|gb|ADE19590.1| dTMP kinase [Mycoplasma crocodyli MP145] Length = 220 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 117/212 (55%), Gaps = 13/212 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAAR--HVLLSCGVD 60 +FI+FEG++G+GKTT I + L +K ++ +TREPGG EA R ++L Sbjct: 1 MFITFEGLDGSGKTTVIEKVTELLHKKFPELKYILTREPGGKDIVEAERIREIILDKS-S 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++++A+R H+E+VI P+L E K++LCDRF+DS YAYQG F SL Sbjct: 60 KISPVTEALLYSASRRIHLEHVIWPSLKEKKLVLCDRFIDSFYAYQGYARELGIDFATSL 119 Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 E+ + +PD TI D+ P D +R+ NR D + + + H K +L Sbjct: 120 TELIIDNTIPDLTIFFDINPADSKKRRLANR------LVHDRMDDETEIFHNKVYDGYLK 173 Query: 180 IA-RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 I +++ +R IVD++ SF V ++ + E Sbjct: 174 IIDKDKNNRFIIVDASKSFDEVVEQVIQKLME 205 >gi|306827929|ref|ZP_07461196.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782] gi|304429848|gb|EFM32890.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782] Length = 232 Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 22 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 81 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 82 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 197 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230 >gi|269955162|ref|YP_003324951.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894] gi|269303843|gb|ACZ29393.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894] Length = 281 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 111/209 (53%), Gaps = 13/209 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F+SFEG +G GKTT LL +L +V VTREPGGT R ++L ++ Sbjct: 5 GYFVSFEGGDGGGKTTQARLLGDWLGTALGREVVVTREPGGTALGATLRQLILHG--EDM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 EA+++AA R HV +++RPAL G +++ DR+LDSS AYQ G R+ S+ D L Sbjct: 63 DPRTEALLYAADRAHHVASLVRPALERGAVVITDRYLDSSVAYQSGGRELSEQEVED-LS 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +V+ ++PD TI+LD VD+ R S LD ER D ++ R + A Sbjct: 122 LWAVRGLLPDVTILLD--VDLATS------GARMSGDLDRLERVDDAFRQRTRDAYHRRA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +VD+A + + V + V E Sbjct: 174 AADPARWVVVDAAGTVEEVHAQVRAAVAE 202 >gi|283779876|ref|YP_003370631.1| thymidylate kinase [Pirellula staleyi DSM 6068] gi|283438329|gb|ADB16771.1| thymidylate kinase [Pirellula staleyi DSM 6068] Length = 207 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 8/194 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+SF+G++GAGK+T I LL +L ++ +V V R+PGGTP E R +LL Sbjct: 1 MFLSFDGVDGAGKSTQIRLLAEWLAARSLEVVVCRDPGGTPLGEKLRSILLDDHETPIHR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE VIRPAL GK+++ DRFL ++ YQ + ++ +++ Sbjct: 61 RSEMLLFMASRAQLVEEVIRPALEAGKVVISDRFLLATAVYQAHAGGLVADDVWTVGKVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V +MP ++LD+P KR+ + ES L Y ER RQ FL A Sbjct: 121 VGGMMPARVLLLDMPAAEASKRIARAHDRMESQGLAYLERV--------RQGFLLEAERD 172 Query: 185 PDRCHIVDSAHSFQ 198 P +D+A Q Sbjct: 173 PQTIRAIDAARDPQ 186 >gi|225871114|ref|YP_002747061.1| thymidylate kinase [Streptococcus equi subsp. equi 4047] gi|254808305|sp|C0M7M5|KTHY_STRE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225700518|emb|CAW94978.1| thymidylate kinase [Streptococcus equi subsp. equi 4047] Length = 211 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 5/206 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+FEG +GAGKTT + L LQ + TREPGG AE R ++L Sbjct: 1 MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I PAL G ++L DRF+DSS AYQG + Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + V PD T+ D+P ++GL R+ RE LD E+ D +H++ R+ +L+ Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE-REINRLD-LEQLD--LHQRVRKGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 +A P R +D++ +SV + L Sbjct: 177 LALENPQRIVKIDASQDLESVVSAAL 202 >gi|55820572|ref|YP_139014.1| thymidylate kinase [Streptococcus thermophilus LMG 18311] gi|55822462|ref|YP_140903.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066] gi|116627381|ref|YP_820000.1| thymidylate kinase [Streptococcus thermophilus LMD-9] gi|81559719|sp|Q5M0Z9|KTHY_STRT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|81560889|sp|Q5M5I6|KTHY_STRT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122268018|sp|Q03LW8|KTHY_STRTD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|55736557|gb|AAV60199.1| thymidylate kinase [Streptococcus thermophilus LMG 18311] gi|55738447|gb|AAV62088.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066] gi|116100658|gb|ABJ65804.1| thymidylate kinase [Streptococcus thermophilus LMD-9] Length = 209 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 9/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKT+ + LL R + V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GL R+ RE LD E+ D +H++ RQ +LD Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE-REVNRLD-LEKLD--MHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A +P+R +D++ + + V + WE+++ Sbjct: 177 LAEAEPERIKRIDASQTLEEVVED----TWEIIK 206 >gi|299066795|emb|CBJ37989.1| thymidylate kinase [Ralstonia solanacearum CMR15] Length = 205 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 108/198 (54%), Gaps = 13/198 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL ++ R L ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHS 196 A +P R IVD+A + Sbjct: 173 RRAAAEPGRFVIVDAARA 190 >gi|195978711|ref|YP_002123955.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975416|gb|ACG62942.1| thymidylate kinase Tmk [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 232 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 5/206 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+FEG +GAGKTT + L LQ + TREPGG AE R ++L Sbjct: 22 MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 81 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I PAL G ++L DRF+DSS AYQG + Sbjct: 82 TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 141 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + V PD T+ D+P ++GL R+ RE LD E+ D +H++ R+ +L+ Sbjct: 142 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE-REINRLD-LEQLD--LHQRVRKGYLE 197 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 +A P R +D++ +SV + L Sbjct: 198 LALENPQRIVKIDASQDLESVVSAAL 223 >gi|312277894|gb|ADQ62551.1| Thymidylate kinase [Streptococcus thermophilus ND03] Length = 209 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 9/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKT+ + LL R + V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GL R+ RE LD E+ D +H++ RQ +LD Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE-REVNRLD-LEKID--MHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A +P+R +D++ + + V + WE+++ Sbjct: 177 LAEAEPERIKRIDASQTLEEVVED----TWEIIK 206 >gi|110598215|ref|ZP_01386491.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031] gi|110340130|gb|EAT58629.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031] Length = 212 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 112/212 (52%), Gaps = 4/212 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L +L +V REPGGT AE R +LL E Sbjct: 1 MLITFEGIDGAGKSTQIKKLVSYLADSGREVLTLREPGGTEVAEKIRLILLESR-HEISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + + VI+PAL E KI++ DRF DS+ AYQG L S+ IS Sbjct: 60 VGELLLFSASRAELIHEVIKPALAENKIVILDRFFDSTTAYQGYGRGIDLELLRSIIAIS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + S+ +S+ LD ER + ++ RQ +L+I Sbjct: 120 TCGITPDITFYLDIKPEEALSRKFSAKSIPLAFDSSELDRMERSGLQFYQNVRQGYLNIL 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + R +++ + + I+ ++ E +Q Sbjct: 180 KESNGRMFCLNALEKPEEIHRRIIALLHERLQ 211 >gi|282882208|ref|ZP_06290847.1| dTMP kinase [Peptoniphilus lacrimalis 315-B] gi|281297973|gb|EFA90430.1| dTMP kinase [Peptoniphilus lacrimalis 315-B] Length = 202 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 11/204 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG +G GK+T +L+ L ++N +V TREPGGT +EA R ++L+ E Sbjct: 3 LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYKEMDY 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I+PAL GK++LC+RF+ SS AYQG + + ++ E + Sbjct: 63 RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I + L++++N D ER H K R + ++ + Sbjct: 123 TMGLEPDIVFIFLNKEETLLRKLEN---------ADRLERAGDDFHNKVRDFYKNLQK-- 171 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 D + +D+ S V ++ L ++ Sbjct: 172 KDNYYFIDAWQSIDKVFSDTLEVL 195 >gi|50841735|ref|YP_054962.1| putative thymidylate kinase [Propionibacterium acnes KPA171202] gi|50839337|gb|AAT82004.1| putative thymidylate kinase [Propionibacterium acnes KPA171202] Length = 228 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 26 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 85 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 86 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 145 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 146 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 196 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 197 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 228 >gi|15674539|ref|NP_268713.1| thymidylate kinase [Streptococcus pyogenes M1 GAS] gi|71910144|ref|YP_281694.1| thymidylate kinase [Streptococcus pyogenes MGAS5005] gi|23821808|sp|Q9A190|KTHY_STRP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|13621644|gb|AAK33434.1| putative thymidylate kinase [Streptococcus pyogenes M1 GAS] gi|71852926|gb|AAZ50949.1| thymidylate kinase [Streptococcus pyogenes MGAS5005] Length = 211 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|322388016|ref|ZP_08061623.1| thymidylate kinase [Streptococcus infantis ATCC 700779] gi|321141289|gb|EFX36787.1| thymidylate kinase [Streptococcus infantis ATCC 700779] Length = 212 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + + L+ KN + TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALATGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL+R+ S RE LD + + +H K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAAN-SDREVNRLDL---EGLDLHRKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ V N ++++ Sbjct: 177 LEKEGERIVKIDASLPLNQVVENTKQVLFD 206 >gi|94989835|ref|YP_597935.1| thymidylate kinase [Streptococcus pyogenes MGAS10270] gi|94543343|gb|ABF33391.1| Thymidylate kinase [Streptococcus pyogenes MGAS10270] Length = 253 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|261346039|ref|ZP_05973683.1| dTMP kinase [Providencia rustigianii DSM 4541] gi|282565926|gb|EFB71461.1| dTMP kinase [Providencia rustigianii DSM 4541] Length = 208 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 121/213 (56%), Gaps = 13/213 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV--DEF 62 FI EG+EGAGKTT I+ + L+ + V TREPGGTP AE R L+ G+ D+ Sbjct: 5 FIVIEGLEGAGKTTAINTVVETLKLAGINEMVFTREPGGTPLAEKLRE-LIKQGIEGDKV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQ 121 +AE ++ AAR+ V+ VI+PAL GK ++ DR SS AYQG R+ +HL + SL+ Sbjct: 64 TDKAELLMLYAARVQLVDTVIKPALAAGKWVIGDRHDLSSQAYQGGGREIDRHL-MASLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P T+ LDLP ++GL+R ++R LD E++ + E+ R +L++A Sbjct: 123 NLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRHRYLELA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D +D++ + V T+I + E + K Sbjct: 177 AAD-DTILTIDASQDIEQVQTDIRRTLLEWLGK 208 >gi|163782656|ref|ZP_02177653.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159882229|gb|EDP75736.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 200 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 14/200 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GKTT L FL+ K DV + REPGGTP E R +L++ ++E Sbjct: 1 MLITFEGIDGSGKTTQSKKLYEFLREKGLDVSLYREPGGTPLGEELRDILINKELNE--- 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F AR V ++P + G +++ DRF DS+ AYQG F+ L E + Sbjct: 58 RTELLLFEGARTQLVLERLKPDMERGMVVILDRFTDSTLAYQGYGRGLDLEFVKKLNEFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T +LD+ + + R+ RE + D +V +K R+ FL+IAR + Sbjct: 118 SFGIKPDITFLLDIEPETAVGRI------REKSRFD-----NVDFLKKVREGFLEIARKE 166 Query: 185 PDRCHIVDSAHSFQSVATNI 204 +R ++D+ + V +I Sbjct: 167 SERVVVLDTHRGEEEVFGDI 186 >gi|328758423|gb|EGF72039.1| thymidylate kinase [Propionibacterium acnes HL020PA1] Length = 214 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|52424624|ref|YP_087761.1| thymidylate kinase [Mannheimia succiniciproducens MBEL55E] gi|59798189|sp|Q65V34|KTHY_MANSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52306676|gb|AAU37176.1| Tmk protein [Mannheimia succiniciproducens MBEL55E] Length = 214 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 10/204 (4%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI EG+EGAGKTT +++++ D+ TREPGGTP AE R+++ + Sbjct: 6 NGKFIVLEGLEGAGKTTARQAVVEQLNALGITDLLFTREPGGTPLAEKLRNLIKYETEEP 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQ G R HL L++L Sbjct: 66 VTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRQIDSHL-LETL 124 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + + PD T+ LDL IGL R + R LD E++++ ++ R +L++ Sbjct: 125 KKTVLGDFEPDFTLYLDLSPAIGLARARGR------GELDRIEQQNLAFFDRTRTRYLEL 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ P + I+++ S + V +I Sbjct: 179 VKDNP-KAVIINAEQSIERVTADI 201 >gi|170718663|ref|YP_001783858.1| thymidylate kinase [Haemophilus somnus 2336] gi|189028835|sp|B0URV9|KTHY_HAES2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|168826792|gb|ACA32163.1| dTMP kinase [Haemophilus somnus 2336] Length = 210 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 121/220 (55%), Gaps = 14/220 (6%) Query: 1 MNSGLFISFEGIEGAGKT-THISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EG+EGAGK+ TH ++ + ++V TREPGGTP AE R+++ Sbjct: 1 MKTGKFIVIEGLEGAGKSSTHQVVVNTLTEFGIHEVVFTREPGGTPLAEKLRYLIKHEAE 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118 + A+AE ++ AAR+ VENVI+PAL GK ++ DR SS AYQ G R +HL + Sbjct: 61 ELVTAKAELLMLYAARVQLVENVIKPALARGKWVVGDRHDLSSQAYQGGGRGLDRHL-MT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176 +L+ + + PD T+ LD+ +IGL R + R L E LD+F R R+ Sbjct: 120 TLKNAVLGDFKPDFTLYLDIEPEIGLARAKGRGELDRIEQQNLDFFHRT--------RER 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +L + + P+ ++++ + V +I V + +++ V Sbjct: 172 YLQLVQQDPNAV-LINAGQPIELVQQDIRKAVQKFIEENV 210 >gi|59798224|sp|Q6AB62|KTHY_PROAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 204 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 2 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 62 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 122 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 173 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 204 >gi|314921698|gb|EFS85529.1| thymidylate kinase [Propionibacterium acnes HL050PA3] Length = 214 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|289424286|ref|ZP_06426069.1| dTMP kinase [Propionibacterium acnes SK187] gi|289428912|ref|ZP_06430592.1| dTMP kinase [Propionibacterium acnes J165] gi|295129812|ref|YP_003580475.1| dTMP kinase [Propionibacterium acnes SK137] gi|289154983|gb|EFD03665.1| dTMP kinase [Propionibacterium acnes SK187] gi|289157913|gb|EFD06136.1| dTMP kinase [Propionibacterium acnes J165] gi|291375883|gb|ADD99737.1| dTMP kinase [Propionibacterium acnes SK137] gi|313765300|gb|EFS36664.1| thymidylate kinase [Propionibacterium acnes HL013PA1] gi|313772784|gb|EFS38750.1| thymidylate kinase [Propionibacterium acnes HL074PA1] gi|313793193|gb|EFS41260.1| thymidylate kinase [Propionibacterium acnes HL110PA1] gi|313802718|gb|EFS43936.1| thymidylate kinase [Propionibacterium acnes HL110PA2] gi|313806376|gb|EFS44883.1| thymidylate kinase [Propionibacterium acnes HL087PA2] gi|313810924|gb|EFS48638.1| thymidylate kinase [Propionibacterium acnes HL083PA1] gi|313814577|gb|EFS52291.1| thymidylate kinase [Propionibacterium acnes HL025PA1] gi|313815332|gb|EFS53046.1| thymidylate kinase [Propionibacterium acnes HL059PA1] gi|313817530|gb|EFS55244.1| thymidylate kinase [Propionibacterium acnes HL046PA2] gi|313822009|gb|EFS59723.1| thymidylate kinase [Propionibacterium acnes HL036PA1] gi|313824095|gb|EFS61809.1| thymidylate kinase [Propionibacterium acnes HL036PA2] gi|313826462|gb|EFS64176.1| thymidylate kinase [Propionibacterium acnes HL063PA1] gi|313828770|gb|EFS66484.1| thymidylate kinase [Propionibacterium acnes HL063PA2] gi|313831689|gb|EFS69403.1| thymidylate kinase [Propionibacterium acnes HL007PA1] gi|313834429|gb|EFS72143.1| thymidylate kinase [Propionibacterium acnes HL056PA1] gi|313840380|gb|EFS78094.1| thymidylate kinase [Propionibacterium acnes HL086PA1] gi|314916047|gb|EFS79878.1| thymidylate kinase [Propionibacterium acnes HL005PA4] gi|314917199|gb|EFS81030.1| thymidylate kinase [Propionibacterium acnes HL050PA1] gi|314926586|gb|EFS90417.1| thymidylate kinase [Propionibacterium acnes HL036PA3] gi|314931095|gb|EFS94926.1| thymidylate kinase [Propionibacterium acnes HL067PA1] gi|314955036|gb|EFS99442.1| thymidylate kinase [Propionibacterium acnes HL027PA1] gi|314959075|gb|EFT03177.1| thymidylate kinase [Propionibacterium acnes HL002PA1] gi|314961349|gb|EFT05450.1| thymidylate kinase [Propionibacterium acnes HL002PA2] gi|314964605|gb|EFT08705.1| thymidylate kinase [Propionibacterium acnes HL082PA1] gi|314969704|gb|EFT13802.1| thymidylate kinase [Propionibacterium acnes HL037PA1] gi|314974770|gb|EFT18865.1| thymidylate kinase [Propionibacterium acnes HL053PA1] gi|314977031|gb|EFT21126.1| thymidylate kinase [Propionibacterium acnes HL045PA1] gi|314980307|gb|EFT24401.1| thymidylate kinase [Propionibacterium acnes HL072PA2] gi|314985483|gb|EFT29575.1| thymidylate kinase [Propionibacterium acnes HL005PA1] gi|314987392|gb|EFT31483.1| thymidylate kinase [Propionibacterium acnes HL005PA2] gi|314989067|gb|EFT33158.1| thymidylate kinase [Propionibacterium acnes HL005PA3] gi|315078377|gb|EFT50408.1| thymidylate kinase [Propionibacterium acnes HL053PA2] gi|315082155|gb|EFT54131.1| thymidylate kinase [Propionibacterium acnes HL078PA1] gi|315082702|gb|EFT54678.1| thymidylate kinase [Propionibacterium acnes HL027PA2] gi|315086061|gb|EFT58037.1| thymidylate kinase [Propionibacterium acnes HL002PA3] gi|315087646|gb|EFT59622.1| thymidylate kinase [Propionibacterium acnes HL072PA1] gi|315097318|gb|EFT69294.1| thymidylate kinase [Propionibacterium acnes HL038PA1] gi|315099505|gb|EFT71481.1| thymidylate kinase [Propionibacterium acnes HL059PA2] gi|315101988|gb|EFT73964.1| thymidylate kinase [Propionibacterium acnes HL046PA1] gi|315106312|gb|EFT78288.1| thymidylate kinase [Propionibacterium acnes HL030PA1] gi|315110089|gb|EFT82065.1| thymidylate kinase [Propionibacterium acnes HL030PA2] gi|327331312|gb|EGE73051.1| dTMP kinase [Propionibacterium acnes HL096PA2] gi|327333300|gb|EGE75020.1| dTMP kinase [Propionibacterium acnes HL096PA3] gi|327445223|gb|EGE91877.1| thymidylate kinase [Propionibacterium acnes HL013PA2] gi|327447308|gb|EGE93962.1| thymidylate kinase [Propionibacterium acnes HL043PA1] gi|327450246|gb|EGE96900.1| thymidylate kinase [Propionibacterium acnes HL043PA2] gi|327454514|gb|EGF01169.1| thymidylate kinase [Propionibacterium acnes HL087PA3] gi|327456584|gb|EGF03239.1| thymidylate kinase [Propionibacterium acnes HL083PA2] gi|327457142|gb|EGF03797.1| thymidylate kinase [Propionibacterium acnes HL092PA1] gi|328755566|gb|EGF69182.1| thymidylate kinase [Propionibacterium acnes HL087PA1] gi|328756894|gb|EGF70510.1| thymidylate kinase [Propionibacterium acnes HL025PA2] gi|328761125|gb|EGF74669.1| dTMP kinase [Propionibacterium acnes HL099PA1] Length = 214 Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|221134523|ref|ZP_03560828.1| thymidylate kinase [Glaciecola sp. HTCC2999] Length = 211 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGK+T I ++R L+ +++ +TREPGGTP AEA R + DE Sbjct: 5 GQFIVVEGLEGAGKSTVIKAIQRELEAHGHELKLTREPGGTPMAEAIRDCVKHDWQDEIV 64 Query: 64 AE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR +EN I+PAL G +L DR SS AYQG L++++E Sbjct: 65 TEQTELLLMYAARSQLIENTIKPALANGIWVLGDRHDWSSLAYQGGGRQVNLAHLNAIRE 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ + TI LD+ +GL R R LD E+ + E+ R+ +L++ + Sbjct: 125 LTLDGFTANLTIYLDINPKVGLSRAAAR------GELDRIEQSGLAFFERARETYLNLVK 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N D ++D+ S V +++ V Sbjct: 179 N-SDSAILIDAEQSIDKVREDVITAV 203 >gi|330814087|ref|YP_004358326.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063] gi|327487182|gb|AEA81587.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063] Length = 211 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 7/194 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 +N G+FI+FEGIEG+GK+T I LL +FL+ + +++TREPGGT +E R +++ Sbjct: 3 LNRGIFITFEGIEGSGKSTQIKLLYKFLKANVSKKIYLTREPGGTKISEKIRKLVIKDLN 62 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E E + AAR +H + +I+ L G I+LCDR+LDS+ AYQ S + Sbjct: 63 EENNPLTELFLLFAARAEHYD-LIKEKLRSGYIVLCDRYLDSTIAYQHFNGSIDLKLIHY 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 LQ++ + + P+ TI+LD + KR+ R + LD F+R+ + ++ FL Sbjct: 122 LQKLIDKNIRPNLTILLDANPSVSKKRMHLR-----AKKLDRFDRESLKKMNIIKKGFLA 176 Query: 180 IARNQPDRCHIVDS 193 IA+ + R +++ Sbjct: 177 IAKVEKKRIFVING 190 >gi|160898829|ref|YP_001564411.1| thymidylate kinase [Delftia acidovorans SPH-1] gi|160364413|gb|ABX36026.1| dTMP kinase [Delftia acidovorans SPH-1] Length = 228 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 67/175 (38%), Positives = 98/175 (56%), Gaps = 19/175 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFISFEGI+GAGK++HI+ L + + + V +TREPGGTP AE R ++L +D Sbjct: 7 AGLFISFEGIDGAGKSSHIASLAQAFRDQGRTVTLTREPGGTPLAEKLRALMLHDAMDPL 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++ AAR DH+ VI PAL G+++LCDRF D+++AYQG L +L+ Sbjct: 67 ---TEALIAFAARRDHLVQVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLQPLATLER 123 Query: 123 ISVQEVMPD--------CTIILDLPVDIGLK-----RVQNRYSLRESACLDYFER 164 + P T+ DLP ++ + RV +R+ ES +F R Sbjct: 124 MVQTGTAPQPDLLREPHLTLWFDLPAEVAAERLASARVPDRF---ESEPGSFFAR 175 >gi|251793227|ref|YP_003007955.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700] gi|247534622|gb|ACS97868.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700] Length = 210 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 111/208 (53%), Gaps = 12/208 (5%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T H ++ + DV TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSTAHQCVVDALKELGIDDVVFTREPGGTPLAEKLRHLIKHETEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L SL+E Sbjct: 63 TDKAELLMLYAARIQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLDQRLLQSLKE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ LD+ +GL R + R L E LD+F R R +L + Sbjct: 123 TILGDFEPDLTLYLDIDPAVGLARARGRGELDRIEQQNLDFFHRT--------RARYLAL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ P + I+++ + V T+I + V Sbjct: 175 VKDNP-KAVIINAEQPVEQVKTDIQSAV 201 >gi|189350690|ref|YP_001946318.1| thymidylate kinase [Burkholderia multivorans ATCC 17616] gi|189334712|dbj|BAG43782.1| dTMP kinase [Burkholderia multivorans ATCC 17616] Length = 207 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 2 MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 62 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVL 204 >gi|161524554|ref|YP_001579566.1| thymidylate kinase [Burkholderia multivorans ATCC 17616] gi|160341983|gb|ABX15069.1| dTMP kinase [Burkholderia multivorans ATCC 17616] Length = 206 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 172 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVL 203 >gi|145636277|ref|ZP_01791946.1| thymidylate kinase [Haemophilus influenzae PittHH] gi|145270442|gb|EDK10376.1| thymidylate kinase [Haemophilus influenzae PittHH] Length = 210 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE R ++ + Sbjct: 3 GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRDLIKHETEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+E Sbjct: 63 TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLKE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI LD+ IGL R + R LD E+ D+ + R +L + + Sbjct: 123 TVLGDFEPDLTIYLDIDPSIGLARARGR------GELDRIEQMDLDFFHRTRARYLALVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ S + V +I + V Sbjct: 177 DNP-KAVMINAEQSIELVQADIESAV 201 >gi|221198166|ref|ZP_03571212.1| thymidylate kinase [Burkholderia multivorans CGD2M] gi|221208343|ref|ZP_03581346.1| thymidylate kinase [Burkholderia multivorans CGD2] gi|221215091|ref|ZP_03588058.1| thymidylate kinase [Burkholderia multivorans CGD1] gi|221165027|gb|EED97506.1| thymidylate kinase [Burkholderia multivorans CGD1] gi|221171756|gb|EEE04200.1| thymidylate kinase [Burkholderia multivorans CGD2] gi|221182098|gb|EEE14499.1| thymidylate kinase [Burkholderia multivorans CGD2M] Length = 207 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 2 MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 62 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFARTRGE 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVL 204 >gi|254796905|ref|YP_003081742.1| thymidylate kinase [Neorickettsia risticii str. Illinois] gi|254590141|gb|ACT69503.1| thymidylate kinase [Neorickettsia risticii str. Illinois] Length = 199 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 83/132 (62%), Gaps = 3/132 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GK+T + LL +FL + Y +TREPGGTP AE+ R ++L +D Sbjct: 1 MFIVFEGIDGSGKSTQVKLLSKFLAKNGYPCVLTREPGGTPFAESLRSMILHDSIDPM-- 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++ AR+DH VI PAL EGKI++CDRF+ S+ AYQG + + L ++S Sbjct: 59 -ARLLLIVGARVDHYNKVILPALKEGKIVVCDRFIYSTLAYQGYGEKIDLQTILDLHKLS 117 Query: 125 VQEVMPDCTIIL 136 V PD T++L Sbjct: 118 GCLVEPDLTLLL 129 >gi|323340134|ref|ZP_08080398.1| dTMP kinase [Lactobacillus ruminis ATCC 25644] gi|323092325|gb|EFZ34933.1| dTMP kinase [Lactobacillus ruminis ATCC 25644] Length = 210 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 9/212 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFG 63 +FI+FEG +G+GKT+ I + + L++ +V TREPGG +EA R+V+L E Sbjct: 1 MFITFEGTDGSGKTSVIKAIVKELEKNGKTEYVLTREPGGNRISEAIRNVILDERFVEMD 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AAAR H+ I PAL GK++LCDRF+DSS YQG S + + Sbjct: 61 ERTEALLYAAARRQHIVETINPALSAGKLVLCDRFVDSSIVYQGAGRSIGTDRIAEMNRF 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI LD+ ++GL+R++ R E LD+ + + + +L++A Sbjct: 121 ATDGLTPDLTIFLDIEPELGLERIR-RNRQDEVNRLDH---EKMSFYRTVHDAYLELATK 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R VD++ ++V V E+++KR Sbjct: 177 DSKRIVEVDASQPLEAVIFE----VREILKKR 204 >gi|89095549|ref|ZP_01168452.1| thymidylate kinase [Oceanospirillum sp. MED92] gi|89080187|gb|EAR59456.1| thymidylate kinase [Oceanospirillum sp. MED92] Length = 214 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/202 (38%), Positives = 114/202 (56%), Gaps = 6/202 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG EG GK+T+I L L + +V +TREPGGTP AE R +LL+ + Sbjct: 6 SGRFITVEGTEGVGKSTNIEYLCSLLDAQGIEVVLTREPGGTPLAEELRELLLAPREETV 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ENVI+PAL G ++ DRF D+++AYQG + +L+ Sbjct: 66 SEDTELLLMFAARAQHLENVIKPALGRGAWVVSDRFTDATFAYQGGGRGVNVDHIQALET 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I + PD T++LDL V+ GLKR R + D FER+ + EK R +L A Sbjct: 126 IVQHGLQPDLTLLLDLDVETGLKRASKR------SEPDRFEREKLDFFEKVRSTYLQRAS 179 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 +P+R ++D+ S V + I Sbjct: 180 AEPERFAVIDAGRSIPDVQSQI 201 >gi|283768611|ref|ZP_06341523.1| dTMP kinase [Bulleidia extructa W1219] gi|283105003|gb|EFC06375.1| dTMP kinase [Bulleidia extructa W1219] Length = 225 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 111/203 (54%), Gaps = 5/203 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI+ EG +G+GK+T + + LQ++ Y + +TREPGG+ AE R ++L Sbjct: 16 MKKALFITIEGPDGSGKSTVSQTVCQRLQQEGYRLQLTREPGGSKIAEQIRSIILDPQNT 75 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A EA+++AA+R H+ + + PAL G ++ DRF+DSS AYQG + + Sbjct: 76 DMDARTEALLYAASRRQHLMDKVLPALENGIPVISDRFVDSSLAYQGVGRCIGIEPVWLI 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ +PD TI LD+ + GL+R+Q + LD ++++ H + Q + I Sbjct: 136 NEFAIEGCLPDKTIYLDIDAETGLRRIQ-----KGRNQLDRLDQEEASFHTRVFQGYQTI 190 Query: 181 ARNQPDRCHIVDSAHSFQSVATN 203 + PDR VD+ + V + Sbjct: 191 LKRFPDRFIKVDARQGLEKVVED 213 >gi|228989239|ref|ZP_04149232.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442] gi|228995422|ref|ZP_04155092.1| Thymidylate kinase [Bacillus mycoides Rock3-17] gi|229003036|ref|ZP_04160893.1| Thymidylate kinase [Bacillus mycoides Rock1-4] gi|228758194|gb|EEM07382.1| Thymidylate kinase [Bacillus mycoides Rock1-4] gi|228764283|gb|EEM13160.1| Thymidylate kinase [Bacillus mycoides Rock3-17] gi|228770449|gb|EEM19020.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442] Length = 208 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 116/209 (55%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GK+T I+ L + ++K V TREPGG +E R +L + Sbjct: 2 KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIRAILHNQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL + ++LCDRF+DSS AYQG ++ L +D + E Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEKNYLVLCDRFIDSSLAYQG---YARGLGIDKVFE 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I + ++ MP+ TI LD+ + GL R++ + RE LD + + H+ R +L Sbjct: 119 INRFATEDCMPNLTIYLDIEPEAGLARIEKDAN-REVNRLDM---ESIEFHKCVRDGYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + DR +V++ + + ++ ++ Sbjct: 175 VVDRFLDRIVVVNADQPIEKIVEEVIQLI 203 >gi|222152173|ref|YP_002561333.1| putative thymidylate kinase homolog [Macrococcus caseolyticus JCSC5402] gi|222121302|dbj|BAH18637.1| putative thymidylate kinase homolog [Macrococcus caseolyticus JCSC5402] Length = 204 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 120/208 (57%), Gaps = 9/208 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDEFGA 64 FI+ EG EG+GKTT I + L + +DV TREPGG +E R +LL V ++ Sbjct: 4 FITIEGPEGSGKTTVIKAIADHLIAR-FDVVCTREPGGIKISEDIRKILLDEANVMDY-- 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA+R H+ + PAL +G+I++CDRF+DSS AYQG + S+ E + Sbjct: 61 RTEALLFAASRRQHLIEKVLPALQKGEIVICDRFIDSSLAYQGYARGIGMDEIRSINEFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD T+ L + +IGL R+++ + RE+ LD ++ + HE+ + + +A Sbjct: 121 IEGKYPDLTLYLKVSAEIGLNRIKD--NSRETNRLD---KEAIDFHEQVVEGYDILAAQY 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R I+D+ S + V + + + +L+ Sbjct: 176 PERIRIIDAEQSPEQVVSESMKWINQLL 203 >gi|309782015|ref|ZP_07676745.1| dTMP kinase [Ralstonia sp. 5_7_47FAA] gi|308919081|gb|EFP64748.1| dTMP kinase [Ralstonia sp. 5_7_47FAA] Length = 205 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 19/213 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + LQ K V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A R +H+ VI+PAL G ++ DRF D+++AYQG + L +D Sbjct: 60 -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQG---GGRGLAID 115 Query: 119 SLQ--EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L+ E VQ+ + P TI+ DL +I R L ++ D FE + + R Sbjct: 116 RLEVLERWVQQGLQPTKTILFDLAPEIAAAR------LADARTPDKFEAESAQFFLRTRA 169 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A +PDR ++++ + ++ N++ Sbjct: 170 EYLRRAAAEPDRFVVLNANRERADIQKDLENLL 202 >gi|315633633|ref|ZP_07888923.1| dTMP kinase [Aggregatibacter segnis ATCC 33393] gi|315477675|gb|EFU68417.1| dTMP kinase [Aggregatibacter segnis ATCC 33393] Length = 210 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 114/209 (54%), Gaps = 12/209 (5%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI EG+EGAGK+T H ++ + DV TREPGGTP AE RH++ + Sbjct: 2 AGKFIVIEGLEGAGKSTAHQCVVDTLKELGVNDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG FL L+ Sbjct: 62 VTDKAELLMLYAARIQLVDNVIKPALAKGKWVVGDRHDMSSQAYQGGGRQLGAAFLTHLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 +I + + PD T+ LD+ +GL R + R L E LD+F R R +L+ Sbjct: 122 QIVLGDFEPDLTLYLDIDPAVGLARARGRGELDRIEQQHLDFFHRT--------RARYLE 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ P + ++++ S + V +I + V Sbjct: 174 LVKDNP-KAVMINAEQSIEQVQADIKSAV 201 >gi|113867580|ref|YP_726069.1| thymidylate kinase [Ralstonia eutropha H16] gi|122946913|sp|Q0KBC0|KTHY_RALEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|113526356|emb|CAJ92701.1| thymidylate kinase (dTMP kinase) [Ralstonia eutropha H16] Length = 203 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEGI+GAGK+THI + L+ ++ V TREPGGT E R +LL + Sbjct: 3 GKFITFEGIDGAGKSTHIDWVADRLRARSDIAGVVTTREPGGTSLGEDLRQILLHR---K 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ AAR +H+ VI PAL GK ++ DRF D+++AYQG L+ L+ Sbjct: 60 MHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVLE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T++ D+P++ +R+ + D FE + ++ R +L A Sbjct: 120 DWVQGGLQPDLTLLFDVPLETASERLAG------ARAPDRFESESRAFFQRTRDEYLRRA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P R ++D+ S + + I+ Sbjct: 174 AQSPQRFRVIDATRSIADIRDELEKII 200 >gi|91788382|ref|YP_549334.1| thymidylate kinase [Polaromonas sp. JS666] gi|123164854|sp|Q12AK6|KTHY_POLSJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91697607|gb|ABE44436.1| thymidylate kinase [Polaromonas sp. JS666] Length = 225 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 75/231 (32%), Positives = 118/231 (51%), Gaps = 37/231 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEGI+GAGK+THI+ L + + V +TREPGGTP AE R ++L+ +D Sbjct: 3 GLFISFEGIDGAGKSTHIAGLADAFRAQGRAVTLTREPGGTPLAEKLRDLVLNDAMDSL- 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++ AAR DH+ VI PAL+ G ++LCDRF D+++AYQG L +L++ Sbjct: 62 --TEALLIFAARRDHLVRVIAPALVRGDVVLCDRFTDATFAYQGAGRGFDLAVLATLEQW 119 Query: 124 -------------------SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 V+ V+ P T+ DLP + R+Q + D FE Sbjct: 120 VQSDEGLLGDPAGNFPMKPEVETVIEPHLTVWFDLPPEEAALRLQG------ARVPDKFE 173 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + + + D + P+R ++ A+ ++VW+ V++ Sbjct: 174 AQPLEFFRRVAKGYSDRQQGHPERFARIN--------ASQPRDVVWQAVRQ 216 >gi|225867971|ref|YP_002743919.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus] gi|259494281|sp|C0MGT8|KTHY_STRS7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225701247|emb|CAW98209.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus] Length = 211 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 5/201 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+FEG +GAGKTT + L LQ + TREPGG AE R ++L Sbjct: 1 MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I PAL G ++L DRF+DSS AYQG + Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPALEAGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + V PD T+ D+P ++GL R+ RE LD E+ D +H++ R+ +L+ Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE-REVNRLD-LEQLD--LHQRVRKGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 +A P R +D++ +SV Sbjct: 177 LALENPQRIVKIDASQDLESV 197 >gi|269796533|ref|YP_003315988.1| thymidylate kinase [Sanguibacter keddieii DSM 10542] gi|269098718|gb|ACZ23154.1| thymidylate kinase [Sanguibacter keddieii DSM 10542] Length = 215 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 11/210 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 SG FISFEG +GAGK+T LL +L++ V TREPGGT R +L D Sbjct: 6 QSGYFISFEGGDGAGKSTQSRLLGEWLEQVTGRRVVWTREPGGTELGLVLRQAVLHG--D 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++A R HV +++RPAL G +++ DR+LDSS AYQ + ++ L Sbjct: 64 HVDPRTEALLYATDRAHHVASLVRPALERGDVVITDRYLDSSIAYQAGGRTLPVEEIEQL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + ++P T++LD+ +G +R+ A D ER H + RQ +L+ Sbjct: 124 STWATEGLLPHATVLLDIDPLVGTRRL--------DAAPDRLERAGDEFHRRTRQAYLER 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A P R +VD++ + ++ I + V E Sbjct: 176 AAQDPARWVVVDASGTVDAIHREIRSAVAE 205 >gi|157375783|ref|YP_001474383.1| dTMP kinase [Shewanella sediminis HAW-EB3] gi|157318157|gb|ABV37255.1| dTMP kinase [Shewanella sediminis HAW-EB3] Length = 210 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 114/205 (55%), Gaps = 10/205 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63 FI EG+EGAGK++ ISL++ F+++ V TREPGGTP AE R ++ ++ D Sbjct: 9 FIVIEGLEGAGKSSAISLVRDFIEKHTGTAPVCTREPGGTPLAERMRDLVKIADESDPLC 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++ AAR V NVI+PAL G+ +L DR SS AYQG L ++ + Sbjct: 69 DEAECLLLYAARAQLVANVIKPALTRGEWVLGDRHNLSSLAYQGGGRGLMDL-VEVVSHA 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ E PD TI LD+ ++GL R +R LD E++++ E+ R FL A + Sbjct: 128 TLGEFKPDLTIYLDIDPELGLSRAASRGE------LDRIEKQELAFFERARGTFLSFA-S 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + D ++D+ + V +IL ++ Sbjct: 181 KDDSIAVIDAGQTMAEVHKDILALL 205 >gi|225861172|ref|YP_002742681.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14] gi|298230558|ref|ZP_06964239.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254568|ref|ZP_06978154.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503053|ref|YP_003724993.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A] gi|254808311|sp|C1CRV9|KTHY_STRZT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225727066|gb|ACO22917.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14] gi|298238648|gb|ADI69779.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A] gi|327389215|gb|EGE87560.1| thymidylate kinase [Streptococcus pneumoniae GA04375] Length = 212 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V +++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKSVLFD 206 >gi|329939427|ref|ZP_08288763.1| integral membrane protein with kinase activity [Streptomyces griseoaurantiacus M045] gi|329301656|gb|EGG45550.1| integral membrane protein with kinase activity [Streptomyces griseoaurantiacus M045] Length = 1078 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 8/202 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T L +++ K ++V +T EPG TP + R +LL Sbjct: 504 NGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTHEPGATPVGKRLRSILLDVSSAGL 563 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 564 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 623 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +R + D E + H + R FL +A Sbjct: 624 WATNGLVPHLTVLLDVDPQAARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 675 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P R +VD ++V T + Sbjct: 676 ADPGRYLVVDGGQEPEAVTTAV 697 >gi|206560328|ref|YP_002231092.1| thymidylate kinase [Burkholderia cenocepacia J2315] gi|229487614|sp|B4EBJ2|KTHY_BURCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|198036369|emb|CAR52265.1| putative thymidylate kinase [Burkholderia cenocepacia J2315] Length = 206 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 109/213 (51%), Gaps = 15/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH++ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLAWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + +R R +A + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFSRTRA 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 171 EYLRRAEEAPHRFAIVDATRSIPEIRQQLERVL 203 >gi|107028928|ref|YP_626023.1| thymidylate kinase [Burkholderia cenocepacia AU 1054] gi|116689914|ref|YP_835537.1| thymidylate kinase [Burkholderia cenocepacia HI2424] gi|170733252|ref|YP_001765199.1| thymidylate kinase [Burkholderia cenocepacia MC0-3] gi|123070937|sp|Q1BH55|KTHY_BURCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221725|sp|A0K817|KTHY_BURCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487584|sp|B1JTS0|KTHY_BURCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|105898092|gb|ABF81050.1| thymidylate kinase [Burkholderia cenocepacia AU 1054] gi|116648003|gb|ABK08644.1| thymidylate kinase [Burkholderia cenocepacia HI2424] gi|169816494|gb|ACA91077.1| dTMP kinase [Burkholderia cenocepacia MC0-3] Length = 206 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVL 203 >gi|325520827|gb|EGC99827.1| thymidylate kinase [Burkholderia sp. TJI49] Length = 206 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 15/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGRLASAGKQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + +R R +A + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFTRTRS 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 171 EYLRRAEEAPHRFAIVDATQSIPEIRQQLERVL 203 >gi|299529315|ref|ZP_07042754.1| thymidylate kinase [Comamonas testosteroni S44] gi|298722693|gb|EFI63611.1| thymidylate kinase [Comamonas testosteroni S44] Length = 229 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 21/220 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + GLFISFEGI+GAGK++HI L + + + V +TREPGGT AE R ++L +D Sbjct: 5 LPKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTSLAEKLRALMLHDAMD 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++ AAR DH+ VI PAL G++++ DRF D+++AYQG L +L Sbjct: 65 PL---TEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSAL 121 Query: 121 QEISVQEVM------------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + ++ PD T+ DLP ++ +R L + D FE + Sbjct: 122 ERMAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAER------LATARVPDRFEAQPGE 175 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + + AR P R +D+ S +V I V Sbjct: 176 FFARVAKGYAERARTAPGRFVRIDAHASRHAVWQQITQAV 215 >gi|37526718|ref|NP_930062.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1] gi|46576411|sp|Q7N391|KTHY_PHOLL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|36786150|emb|CAE15202.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 212 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 117/218 (53%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKT+ + + LQ+ ++ TREPGGTP AE R L+ GV Sbjct: 1 MNSK-FIVIEGLEGAGKTSAMKTIVEMLQQHGIQNLIFTREPGGTPLAEKLRG-LIKQGV 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 EGEPLTDKAEVLMLYAARVQLVENVIKPALARGTWVVGDRHDLSSQAYQGGGRGIDKNLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL++ + + PD TI LDLP IGL R RE LD E++ + ++ R + Sbjct: 119 TSLRDTVLGDFRPDLTIYLDLPPQIGLLRA------RERGELDRIEKESMDFFDRTRSRY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L+ A Q VD+A + V +I ++ + ++++ Sbjct: 173 LEFA-AQDKSIVTVDAAQPIEQVQADIYQVLEQWLKQQ 209 >gi|83748622|ref|ZP_00945641.1| Thymidylate kinase [Ralstonia solanacearum UW551] gi|207723527|ref|YP_002253926.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum MolK2] gi|207743119|ref|YP_002259511.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum IPO1609] gi|83724746|gb|EAP71905.1| Thymidylate kinase [Ralstonia solanacearum UW551] gi|206588728|emb|CAQ35691.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum MolK2] gi|206594516|emb|CAQ61443.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum IPO1609] Length = 205 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 107/195 (54%), Gaps = 13/195 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL +I R L ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDS 193 A +P+R I+D+ Sbjct: 173 RRAAAEPERFVIIDA 187 >gi|57641338|ref|YP_183816.1| thymidylate kinase [Thermococcus kodakarensis KOD1] gi|73920827|sp|Q5JH21|KTHY_PYRKO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|57159662|dbj|BAD85592.1| thymidylate kinase [Thermococcus kodakarensis KOD1] Length = 205 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 118/210 (56%), Gaps = 18/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 +FI EGI+GAGK+T LL + + + Y+V +T+EP TP + R ++L+ G + Sbjct: 1 MFIVLEGIDGAGKSTQAKLLAEWFENRGYEVVLTKEPTDTPFGKLIRRLVLTGGKEGIID 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + EAEA++FAA R +HV+ +I+P+L GK+++ DR+ SS AYQ R L L+ Sbjct: 61 GAKISHEAEALLFAADRAEHVDKLIKPSLEAGKVVISDRYFYSSLAYQWARG----LDLE 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L +++ V PD +LDLPV + R+++R +S FE + K R+ +L Sbjct: 117 WLIDLNRFAVKPDIVFLLDLPVKESMNRIRSRKV--KSEFDKIFE-----LQRKVRENYL 169 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A P+ I+++ ++V I+ ++ Sbjct: 170 KLAEMFPE-MKIINAMEDVETVHNQIIALI 198 >gi|237808932|ref|YP_002893372.1| thymidylate kinase [Tolumonas auensis DSM 9187] gi|237501193|gb|ACQ93786.1| thymidylate kinase [Tolumonas auensis DSM 9187] Length = 209 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FI EG+EGAGK+T +S + +L++ + TREPGGTP AE R ++ + Sbjct: 2 SGKFIVIEGLEGAGKSTAVSYVLDWLRQHGITRIETTREPGGTPLAEKMRSIVKEVHDEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VEN I+PAL G ++ DR SS AYQG + + ++ Sbjct: 62 LTVQAELLLMYAARVQLVENRIKPALQSGYWVVGDRHDLSSQAYQGGGRGIDPVLISQIK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ IGL R + R LD E++ + ++ R +L++A Sbjct: 122 QAVLGDFAPDLTLYLDIDPAIGLHRARQR------GELDRIEQEALAFFQRTRARYLELA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 R P R I+D++ + + V I Sbjct: 176 RQDP-RISIIDASQTPEQVQAAI 197 >gi|17546503|ref|NP_519905.1| thymidylate kinase [Ralstonia solanacearum GMI1000] gi|23821784|sp|Q8XYH4|KTHY_RALSO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|17428801|emb|CAD15486.1| probable thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum GMI1000] Length = 205 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 13/198 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL ++ R L ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHS 196 A +P R ++D+A + Sbjct: 173 RRAAAEPGRFVVIDAARA 190 >gi|322376438|ref|ZP_08050931.1| dTMP kinase [Streptococcus sp. M334] gi|321282245|gb|EFX59252.1| dTMP kinase [Streptococcus sp. M334] Length = 212 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 4/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + +R +D++ + V Sbjct: 177 LEKEGNRIVKIDASLPLEQV 196 >gi|227326856|ref|ZP_03830880.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 219 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT +++ L+ DV TREPGGTP AE R ++ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGMA 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ V+NVI+PAL G ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R R+ LD E++ + ++ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRA------RQRGELDRIEQESLAFFDRTRSRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + D +D++ S +V+ +I Sbjct: 174 ELA-AEDDSILTIDASQSIDAVSADI 198 >gi|238027001|ref|YP_002911232.1| thymidylate kinase [Burkholderia glumae BGR1] gi|237876195|gb|ACR28528.1| Thymidylate kinase [Burkholderia glumae BGR1] Length = 206 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ L+ K V TREPGGT EA R +LL Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFCEHLRAKIAPAGRQVVQTREPGGTVLGEALRALLLE 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLARVIEPALTRGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+P ++ +R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPEVASER---RGAVR---APDKFESESEAFFLRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 172 YLRRAEEAPHRFLIVDATQSIPQIQRQLEGVL 203 >gi|139439946|ref|ZP_01773283.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC 25986] gi|133774712|gb|EBA38532.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC 25986] Length = 227 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 6/195 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG++GAGK+T LL R L+ Y V REPGGT +E R +LL G Sbjct: 10 FITLEGVDGAGKSTQARLLARALELAGYQVVSLREPGGTAISEKIRALLLDPANTAMGDT 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +++ AAR V VI PAL GK++LCDRF DS+ YQ D + ++V Sbjct: 70 CELLLYEAARAQLVHEVIAPALAAGKVVLCDRFYDSTTCYQAFADGLDRQMVRDANNLAV 129 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 P T++ + + R+ +R D E K + E+ Q F IA +P Sbjct: 130 AGTHPALTLVYHITPEQAALRMADR------GAADRMEAKGMAFQERVYQGFCAIAAEEP 183 Query: 186 DRCHIVDSAHSFQSV 200 +R ++D+ + + V Sbjct: 184 NRVKLIDATATIEEV 198 >gi|94993722|ref|YP_601820.1| thymidylate kinase [Streptococcus pyogenes MGAS10750] gi|94547230|gb|ABF37276.1| Thymidylate kinase [Streptococcus pyogenes MGAS10750] Length = 253 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGRLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|78066662|ref|YP_369431.1| thymidylate kinase [Burkholderia sp. 383] gi|123568272|sp|Q39FH9|KTHY_BURS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77967407|gb|ABB08787.1| thymidylate kinase [Burkholderia sp. 383] Length = 206 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 105/205 (51%), Gaps = 15/205 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGKLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + +R R +A + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFSRTRS 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSV 200 +L A P R IVD+ + + Sbjct: 171 EYLRRAEEAPHRFAIVDATQTIPEI 195 >gi|319941084|ref|ZP_08015420.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B] gi|319805441|gb|EFW02243.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B] Length = 203 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 109/204 (53%), Gaps = 12/204 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EGI+GAGK+T L + L + V TREPGGTP AE R +LL+ DE Sbjct: 3 GRFITIEGIDGAGKSTQTESLLKHLADQGVSVLHTREPGGTPLAEKIRAMLLA---DEMA 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121 +AE ++F AAR DHV VIRP L G+ +L DRF D++YAYQ G+ S + +++L+ Sbjct: 60 PDAETLLFFAARADHVRRVIRPTLESGRWVLSDRFTDATYAYQVGGKGFSGEK--VEALE 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T++ D+ V + D FER + R+ +L A Sbjct: 118 NWTLGGFAPDLTLLFDI-----APAVAAARLRARAGDQDRFERMGEAFFTRVREAYLARA 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205 P+R I+D+ + V+ +I Sbjct: 173 AAAPERFLIIDADRPAKDVSADIF 196 >gi|86148586|ref|ZP_01066870.1| thymidylate kinase [Vibrio sp. MED222] gi|85833615|gb|EAQ51789.1| thymidylate kinase [Vibrio sp. MED222] Length = 210 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 17/210 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ D+ TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLV----K 56 Query: 60 DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +E E E ++ AAR+ VENVI+PAL GK +L DR SS AYQG Sbjct: 57 EEHEGEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++SL+E ++ PD T+ LDL +GL+R + R LD E+ D+ ++ R Sbjct: 117 TTMESLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + +L+IA Q D ++++ + VA +I Sbjct: 171 ERYLEIA-GQDDSVLVINAQQELEQVAADI 199 >gi|77414833|ref|ZP_00790949.1| thymidylate kinase [Streptococcus agalactiae 515] gi|77159110|gb|EAO70305.1| thymidylate kinase [Streptococcus agalactiae 515] Length = 163 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQ 148 L + + PD + D+P ++GL+R+Q Sbjct: 121 LNDYATDSHKPDLXLYFDVPSEVGLERIQ 149 >gi|167629308|ref|YP_001679807.1| thymidylate kinase [Heliobacterium modesticaldum Ice1] gi|167592048|gb|ABZ83796.1| thymidylate kinase [Heliobacterium modesticaldum Ice1] Length = 226 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 78/210 (37%), Positives = 112/210 (53%), Gaps = 1/210 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +GAGKTT +LL + + Y V TREPGGTP +EAAR VLL + Sbjct: 9 GLFITLEGADGAGKTTQGALLAQAFRILGYPVVETREPGGTPVSEAARRVLLDPSLKGMV 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++A AR V VIRPAL G +++CDRF DS+ AYQG L ++ E+ Sbjct: 69 PMAELFLYATARAQLVSEVIRPALASGAVVICDRFTDSTLAYQGFGRGLDLEQLAAINEM 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD+ GL R + R + +D E ++ HE+ R+ FL +A Sbjct: 129 ATGGLTPDLTLLLDIDTGEGLVRARLRRPEGTKWQGVDRMELEEAAFHERVRRGFLQLAE 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R + + + V I++ LV Sbjct: 189 KDRARICPIAAGGAIAEVHRRIIDAARRLV 218 >gi|68249058|ref|YP_248170.1| thymidylate kinase [Haemophilus influenzae 86-028NP] gi|68057257|gb|AAX87510.1| thymidylate kinase [Haemophilus influenzae 86-028NP] Length = 219 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 8/203 (3%) Query: 3 SGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+N+I+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 + P + ++++ S + V +I Sbjct: 185 KENP-KAVVINAEQSIELVQADI 206 >gi|21909825|ref|NP_664093.1| thymidylate kinase [Streptococcus pyogenes MGAS315] gi|161486344|ref|NP_802832.2| thymidylate kinase [Streptococcus pyogenes SSI-1] gi|25453083|sp|Q8K8H4|KTHY_STRP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21904011|gb|AAM78896.1| putative thymidylate kinase [Streptococcus pyogenes MGAS315] Length = 211 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 209 >gi|212712810|ref|ZP_03320938.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM 30120] gi|212684502|gb|EEB44030.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM 30120] Length = 208 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 115/202 (56%), Gaps = 11/202 (5%) Query: 6 FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62 FI EG+EGAGKTT I ++++ Q +D+ TREPGGTP AE R L+ G+ D+ Sbjct: 5 FIVIEGLEGAGKTTAINTVVETLTQAGVHDMVFTREPGGTPLAEKLRE-LIKQGIEGDKV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ V+ VI+PAL EGK ++ DR SS AYQG + SL++ Sbjct: 64 TDKAELLMLYAARVQLVDTVIKPALAEGKWVIGDRHDLSSQAYQGGGREIDRQLMASLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T+ LDLP ++GL+R ++R LD E++ + E+ R +L++A Sbjct: 124 LVLGGFKPALTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRARYLELAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 + +D++ + + V +I Sbjct: 178 AD-ESILTIDASQNIEQVQADI 198 >gi|28811733|dbj|BAC64665.1| putative thymidylate kinase [Streptococcus pyogenes SSI-1] Length = 232 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 22 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 81 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 82 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 197 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230 >gi|206900865|ref|YP_002250503.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12] gi|206739968|gb|ACI19026.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12] Length = 205 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 65/210 (30%), Positives = 114/210 (54%), Gaps = 11/210 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + LFI+FEGI+G+GKTT LLK +L+ K + V++TREPGGT R +LLS Sbjct: 1 MKNSLFITFEGIDGSGKTTQAILLKDYLESKGFKVYLTREPGGTEVGSKIREILLSPDFS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ A+R+++ V++ L E I++C+R+ DS+ AYQG + L + Sbjct: 61 -INPWTEVFLYLASRVENT-IVVKKKLEENYIVICERYADSTIAYQGYGRNLPLNILAEM 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ + PD T+++DL ++ L+R D E + + + R+ +L+I Sbjct: 119 NDIATSGLKPDLTVLIDLDPELALRR---------KKTFDRIEMEGKDFYYRVREGYLEI 169 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ + +R I+ + S + + I+ + E Sbjct: 170 AKREQERFIIIPGSLSKEEIFERIVKRIKE 199 >gi|150020819|ref|YP_001306173.1| dTMP kinase [Thermosipho melanesiensis BI429] gi|166223124|sp|A6LLI7|KTHY_THEM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|149793340|gb|ABR30788.1| dTMP kinase [Thermosipho melanesiensis BI429] Length = 199 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 11/204 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T + LL+++L + V REPGGT E R +LL+ +++ Sbjct: 1 MFIAFEGIDGSGKSTQLVLLEKYLINRGKKVIKVREPGGTILGEKIRDLLLNFNMNK--- 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE VIRP++ +G +L DRF DSS AYQG + ++ L + Sbjct: 58 RSELLLFLASRAQLVEEVIRPSIEKGYFVLADRFSDSSIAYQGGARNLGKDLVEKLNIFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +D+PV + ++R++ + D E++ EK R +L IA+++ Sbjct: 118 TNGIFPDIVFFIDIPVQMAVRRMKEKEK-------DRIEKEGEDFLEKVRTTYLHIAKSR 170 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 + ++D V + I I+ Sbjct: 171 KN-FFVIDGTKDVDYVFSQIKRII 193 >gi|162139412|ref|YP_279788.2| thymidylate kinase [Streptococcus pyogenes MGAS6180] Length = 211 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|254247997|ref|ZP_04941318.1| Thymidylate kinase [Burkholderia cenocepacia PC184] gi|124872773|gb|EAY64489.1| Thymidylate kinase [Burkholderia cenocepacia PC184] Length = 206 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 15/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + +R R +A + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFSRTRA 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD+ S + + ++ Sbjct: 171 EYLRRAEEAPHRFAIVDATRSIPEIRQQLERVL 203 >gi|304439671|ref|ZP_07399573.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371851|gb|EFM25455.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 202 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 10/210 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG +G GKTT + ++ + L+ Y V TREPGGT +E R ++L DE Sbjct: 3 GKFITFEGPDGCGKTTVVDMIYKKLESLGYRVIKTREPGGTDISEKIRDLILDVNNDEMS 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AA+R H E I P L +G I+LC+R++ SSYAYQG + ++ + Sbjct: 63 PRCEALLYAASRAQHTEEKIVPYLNKGYIVLCERYILSSYAYQGYGRGLLEGVV-AINDF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI+L +GL+R + D E + H+K + + +IA+ Sbjct: 122 ATAGIRPDLTILLMGDYRVGLER-------KNEMGADRLELESTDFHKKVYKGYEEIAKY 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++D+ ++V N L + E+++ Sbjct: 175 ED--VTVIDANSELETVFNNTLEKILEMIE 202 >gi|253688875|ref|YP_003018065.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259494276|sp|C6DKS8|KTHY_PECCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|251755453|gb|ACT13529.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 219 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT ++ L+ +V TREPGGTP AE R ++ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARHIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMT 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ V+NVI+PAL G+ ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALANGQWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R + R LD E++ + E+ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQESLAFFERTRSRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + D +D++ S ++V+ +I Sbjct: 174 ELA-AEDDSILTIDASQSIEAVSADI 198 >gi|71802080|gb|AAX71433.1| thymidylate kinase [Streptococcus pyogenes MGAS6180] Length = 253 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|307708576|ref|ZP_07645040.1| thymidylate kinase [Streptococcus mitis NCTC 12261] gi|307615325|gb|EFN94534.1| thymidylate kinase [Streptococcus mitis NCTC 12261] Length = 212 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLETLLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLNIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + R +D++ + V ++++ Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFD 206 >gi|149010423|ref|ZP_01831794.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75] gi|168485884|ref|ZP_02710392.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00] gi|182683879|ref|YP_001835626.1| thymidylate kinase [Streptococcus pneumoniae CGSP14] gi|303254972|ref|ZP_07341051.1| thymidylate kinase [Streptococcus pneumoniae BS455] gi|303259845|ref|ZP_07345820.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293] gi|303262259|ref|ZP_07348203.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292] gi|303264681|ref|ZP_07350599.1| thymidylate kinase [Streptococcus pneumoniae BS397] gi|303267182|ref|ZP_07353049.1| thymidylate kinase [Streptococcus pneumoniae BS457] gi|303269430|ref|ZP_07355199.1| thymidylate kinase [Streptococcus pneumoniae BS458] gi|238691153|sp|B2IP90|KTHY_STRPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147764904|gb|EDK71833.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75] gi|182629213|gb|ACB90161.1| thymidylate kinase [Streptococcus pneumoniae CGSP14] gi|183570969|gb|EDT91497.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00] gi|302598052|gb|EFL65119.1| thymidylate kinase [Streptococcus pneumoniae BS455] gi|302636582|gb|EFL67073.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292] gi|302639050|gb|EFL69510.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293] gi|302641049|gb|EFL71427.1| thymidylate kinase [Streptococcus pneumoniae BS458] gi|302643297|gb|EFL73577.1| thymidylate kinase [Streptococcus pneumoniae BS457] gi|302645768|gb|EFL75997.1| thymidylate kinase [Streptococcus pneumoniae BS397] Length = 212 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLELHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|94987963|ref|YP_596064.1| thymidylate kinase [Streptococcus pyogenes MGAS9429] gi|94991847|ref|YP_599946.1| thymidylate kinase [Streptococcus pyogenes MGAS2096] gi|94541471|gb|ABF31520.1| thymidylate kinase [Streptococcus pyogenes MGAS9429] gi|94545355|gb|ABF35402.1| Thymidylate kinase [Streptococcus pyogenes MGAS2096] Length = 237 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 27 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 86 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 87 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 146 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 147 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 202 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 203 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 235 >gi|50902776|gb|AAT86491.1| Thymidylate kinase [Streptococcus pyogenes MGAS10394] Length = 253 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|161761322|ref|YP_059674.2| thymidylate kinase [Streptococcus pyogenes MGAS10394] gi|59798144|sp|Q5XDM2|KTHY_STRP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 211 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|330817241|ref|YP_004360946.1| Thymidylate kinase [Burkholderia gladioli BSR3] gi|327369634|gb|AEA60990.1| Thymidylate kinase [Burkholderia gladioli BSR3] Length = 206 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 109/212 (51%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ L+ + V TREPGGT E+ R VLL Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFCEQLRAQVAASGRQVVQTREPGGTTLGESLRAVLLE 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A+R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QAMD---LETEALLMFASRREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD TI+ D+P ++ +R R + R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTILFDVPPEVASER---RGAAR---APDKFEAESDAFFLRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVD++ S + + ++ Sbjct: 172 YLRRAEEAPYRFLIVDASQSIAQIQRQLEGVL 203 >gi|319946509|ref|ZP_08020745.1| thymidylate kinase [Streptococcus australis ATCC 700641] gi|319747340|gb|EFV99597.1| thymidylate kinase [Streptococcus australis ATCC 700641] Length = 212 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 70/213 (32%), Positives = 110/213 (51%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G IS EG EGAGK++ + L L++ TREPGG AE R V+L Sbjct: 1 MKQGTLISIEGPEGAGKSSVLEALLPRLEKAGIAYITTREPGGVTIAEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG ++ L Sbjct: 61 EMDPKTELLLYIASRRQHLAERVLPALEAGKLVIMDRFIDSSVAYQGFGRGLAVTDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + P+ T D+ V+ GL R+ S RE LD + + +H+K RQ +L I Sbjct: 121 NQFATDGLKPNRTFYFDIDVEEGLARIAKSAS-REVNRLDL---EGLSLHQKVRQGYLVI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +D++ F V + +V E+++ Sbjct: 177 LEKEPQRVVKIDASQPFDKVVEDTWILVKEVLE 209 >gi|307328251|ref|ZP_07607429.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113] gi|306886085|gb|EFN17093.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113] Length = 1100 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 8/200 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI EG +G+GK+T + L +++ K ++V VTREPG T + R +LL Sbjct: 508 TGFFIVIEGGDGSGKSTQVEALAEWIRAKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAATEIARISR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 628 WATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHQRVRSGFLALAA 679 Query: 183 NQPDRCHIVDSAHSFQSVAT 202 P R +VD+ ++V + Sbjct: 680 ADPARYLVVDAGQLPEAVTS 699 >gi|15900815|ref|NP_345419.1| thymidylate kinase [Streptococcus pneumoniae TIGR4] gi|111658126|ref|ZP_01408824.1| hypothetical protein SpneT_02000692 [Streptococcus pneumoniae TIGR4] gi|148984675|ref|ZP_01817943.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71] gi|148988371|ref|ZP_01819818.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73] gi|148996974|ref|ZP_01824628.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70] gi|149002482|ref|ZP_01827416.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69] gi|149006392|ref|ZP_01830104.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74] gi|149019523|ref|ZP_01834842.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72] gi|168575597|ref|ZP_02721533.1| thymidylate kinase [Streptococcus pneumoniae MLV-016] gi|194397492|ref|YP_002037572.1| thymidylate kinase [Streptococcus pneumoniae G54] gi|225854440|ref|YP_002735952.1| thymidylate kinase [Streptococcus pneumoniae JJA] gi|225858732|ref|YP_002740242.1| thymidylate kinase [Streptococcus pneumoniae 70585] gi|237651112|ref|ZP_04525364.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974] gi|237821889|ref|ZP_04597734.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974M2] gi|307067591|ref|YP_003876557.1| thymidylate kinase [Streptococcus pneumoniae AP200] gi|307127513|ref|YP_003879544.1| thymidylate kinase [Streptococcus pneumoniae 670-6B] gi|23821803|sp|Q97R91|KTHY_STRPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690815|sp|B5E437|KTHY_STRP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808306|sp|C1C6R6|KTHY_STRP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808309|sp|C1CDT1|KTHY_STRZJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|14972410|gb|AAK75059.1| thymidylate kinase [Streptococcus pneumoniae TIGR4] gi|147756674|gb|EDK63714.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70] gi|147759419|gb|EDK66411.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69] gi|147762169|gb|EDK69131.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74] gi|147923066|gb|EDK74181.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71] gi|147926052|gb|EDK77126.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73] gi|147930898|gb|EDK81878.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72] gi|183578645|gb|EDT99173.1| thymidylate kinase [Streptococcus pneumoniae MLV-016] gi|194357159|gb|ACF55607.1| thymidylate kinase [Streptococcus pneumoniae G54] gi|225720178|gb|ACO16032.1| thymidylate kinase [Streptococcus pneumoniae 70585] gi|225723023|gb|ACO18876.1| thymidylate kinase [Streptococcus pneumoniae JJA] gi|301799917|emb|CBW32496.1| thymidylate kinase [Streptococcus pneumoniae OXC141] gi|306409128|gb|ADM84555.1| Thymidylate kinase [Streptococcus pneumoniae AP200] gi|306484575|gb|ADM91444.1| thymidylate kinase [Streptococcus pneumoniae 670-6B] gi|332075547|gb|EGI86015.1| thymidylate kinase [Streptococcus pneumoniae GA17545] gi|332076213|gb|EGI86679.1| thymidylate kinase [Streptococcus pneumoniae GA41301] Length = 212 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|301801780|emb|CBW34491.1| thymidylate kinase [Streptococcus pneumoniae INV200] Length = 212 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + +++H+K R+ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLVLHKKVRKGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|157363328|ref|YP_001470095.1| dTMP kinase [Thermotoga lettingae TMO] gi|157313932|gb|ABV33031.1| dTMP kinase [Thermotoga lettingae TMO] Length = 202 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ISFEGI+G+GK T + L +L+ KN REPGGT E R ++L G + Sbjct: 1 MLISFEGIDGSGKGTQLRLFLSYLKNKNLPYIHVREPGGTELGEILREIVLK-GQFQIYP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A+R V +I PAL E K+++ DRF+DSS YQG ++ L + + Sbjct: 60 KAELLLFLASRAQLVSQIILPALKENKVVVADRFIDSSVVYQGVGRELGPELVEKLNDFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T +D+PV+ LKR D E + + +K R+ +L++AR + Sbjct: 120 TDGLKPDLTFYIDVPVETALKR---------KRIFDRIESEGIEFLKKVRKAYLELARKE 170 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 R +++ + + + + I+ I +L Sbjct: 171 -KRIFLMNGEKAIEEIHSEIILIFEQL 196 >gi|50954227|ref|YP_061515.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07] gi|59798229|sp|Q6AGT5|KTHY_LEIXX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|50950709|gb|AAT88410.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 210 Score = 112 bits (280), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 75/207 (36%), Positives = 113/207 (54%), Gaps = 19/207 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +G GK+T +LL+R+L V TREPGGT R ++L D Sbjct: 9 GLFITLEGGDGVGKSTQAALLERWLLGLGRAVVRTREPGGTDLGAEIREIVLHRRGD-IA 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R HV V+RPAL G+++L DR+LDSS AYQG + + L ++E+ Sbjct: 68 PRAEALLYAADRAHHVATVVRPALERGEVVLQDRYLDSSVAYQG---AGRVLDAGEVREL 124 Query: 124 SV---QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S+ + ++PD TI+LDL R+ + RY D E + H + R + Sbjct: 125 SLWAAEGLLPDLTILLDLDETTARARLGSARTRY--------DRLEAERSEFHARVRAAY 176 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L +A +P R +VD++ + +A I Sbjct: 177 LALA-AEPQRFLVVDASRPVEEIAAEI 202 >gi|296535552|ref|ZP_06897734.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957] gi|296264138|gb|EFH10581.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957] Length = 177 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 65/163 (39%), Positives = 88/163 (53%), Gaps = 6/163 (3%) Query: 38 TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97 TREPGG P AEA R +LLS GV + AEA++ AAR +H IRPAL G ++CDR Sbjct: 5 TREPGGAPGAEALRGLLLSGGV-AWDPVAEAMLMFAARREHWVKTIRPALAAGIWVVCDR 63 Query: 98 FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 F DS+ AYQ L+++++ EV PD T++LDLP + G+ R +R A Sbjct: 64 FADSTLAYQCHGHGLDAAIWRQLKQVALGEVAPDATLVLDLPPERGMARALSR-----GA 118 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200 D E H + F IA +P RC ++D+A SV Sbjct: 119 APDRIESLGSAFHARVNAAFRSIAEAEPQRCALLDAALPPDSV 161 >gi|89074515|ref|ZP_01160987.1| putative thymidylate kinase [Photobacterium sp. SKA34] gi|89049619|gb|EAR55178.1| putative thymidylate kinase [Photobacterium sp. SKA34] Length = 209 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 9/203 (4%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 G FI EG+EGAGK+T I ++ Q + TREPGGTP AE R ++ DE Sbjct: 3 GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHAPASTREPGGTPLAEQMRALVKEGHPDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR+ V+NVI+PAL +G ++ DR SS AYQG +++L+ Sbjct: 63 LTDMAELLLLYAARIQLVDNVIKPALNQGLWVVGDRHDMSSQAYQGGGRGFDRALMENLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI +D+ ++GL+R + R LD E+ ++ + R FL+++ Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRARARFLELS 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 NQP+ IVD++ S + V ++ Sbjct: 177 ENQPN-VIIVDASQSLEKVTEDL 198 >gi|269102268|ref|ZP_06154965.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162166|gb|EEZ40662.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP 102761] Length = 209 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 9/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI EG+EGAGK+T IS + L +D TREPGGTP AE R ++ DE Sbjct: 2 NGKFIVIEGLEGAGKSTAISQVINVLAEHGIHDPVATREPGGTPLAEQMRALVKEGHPDE 61 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++ AAR+ V+NVI+PAL +G+ ++ DR SS AYQG + + +L Sbjct: 62 PLTDMAELLLLYAARIQLVDNVIKPALAQGRWVVGDRHDMSSQAYQGGGRGFEQQLMMNL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD TI +D+ +GL+R + R LD E+ ++ + R FL++ Sbjct: 122 RNTVLGDFCPDFTIYMDIDPALGLQRARGR------GALDRIEQMNIDFFHRARARFLEL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + P+ I+D++ S ++V +I + + + ++++ Sbjct: 176 SEQDPNTV-IIDASQSLEAVTADISSALTQWLEQQ 209 >gi|269959145|ref|YP_003328934.1| thymidylate kinase [Anaplasma centrale str. Israel] gi|269848976|gb|ACZ49620.1| thymidylate kinase [Anaplasma centrale str. Israel] Length = 211 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 17/218 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEG++G GKTT +LL ++L + V +TREPGGT E R VLL + Sbjct: 1 MFITFEGVDGCGKTTQAALLAKYLSDLYGEHRVVLTREPGGTSFNELVREVLLGLTDYKM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GK+++ DRF DS+ AYQG ++ L Sbjct: 61 DRITELMLFMAMRRESFVKVVSPGLLAGKVVISDRFTDSTVAYQGYGCGVDLSLVNMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V +V+PD T ++D+ ++ L R L+ E + ++K R+ F I Sbjct: 121 L-VADVVPDITFVMDISTELALTRTT----------LNGCESRSPEFYDKVREGFRAIVA 169 Query: 183 NQPDRCHIV----DSAHSFQSVATNILNIVWELVQKRV 216 + P RCH+V DS SV I+ + E+ + ++ Sbjct: 170 SNPHRCHMVNCAEDSVEDVYSVHDRIVALFHEVTKDKL 207 >gi|84393882|ref|ZP_00992625.1| thymidylate kinase [Vibrio splendidus 12B01] gi|84375479|gb|EAP92383.1| thymidylate kinase [Vibrio splendidus 12B01] Length = 210 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 17/210 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ D+ TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKAAGVADIVNTREPGGTVLAEKMRSLV----K 56 Query: 60 DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +E E E ++ AAR+ VENVI+PAL GK +L DR SS AYQG Sbjct: 57 EEHEGEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++SL+E ++ PD T+ LDL +GL+R + R LD E+ D+ ++ R Sbjct: 117 TTMESLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + +L+IA Q D ++++ + VA +I Sbjct: 171 ERYLEIA-GQDDSVLVINAQQEIEQVAADI 199 >gi|296284126|ref|ZP_06862124.1| thymidylate kinase [Citromicrobium bathyomarinum JL354] Length = 215 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 108/214 (50%), Gaps = 13/214 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG GK+T L L D +TREPGGT AE R +LL + + Sbjct: 10 FIAFEGGEGVGKSTQAKRLVEALSNHGIDALLTREPGGTTGAEMIRKLLLEPPGTGWRVQ 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AEA++FAAAR DHV I+PALM G+ ++CDRF+ SS AYQG + +L +I Sbjct: 70 AEALLFAAARSDHVAKAIKPALMAGRWVVCDRFVLSSRAYQGLAGGLGDEEVRTLHQIGS 129 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P TI+L+ P D V R R+ D ++ H + F +A++ Sbjct: 130 GGLQPCRTILLEAPGD----DVAERLRKRDGGEADAIGGRNARYHADVARGFAGLAQDD- 184 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 D +D++ S + V E V + ++PL Sbjct: 185 DTIVQIDASGS--------ADAVHEAVMRELAPL 210 >gi|289167781|ref|YP_003446050.1| thymidylate kinase [Streptococcus mitis B6] gi|288907348|emb|CBJ22185.1| thymidylate kinase [Streptococcus mitis B6] Length = 212 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LEKEGNRIVKIDASFPLEQVVETTKAVLFD 206 >gi|121607993|ref|YP_995800.1| dTMP kinase [Verminephrobacter eiseniae EF01-2] gi|166223126|sp|A1WGM5|KTHY_VEREI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|121552633|gb|ABM56782.1| thymidylate kinase [Verminephrobacter eiseniae EF01-2] Length = 226 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 14/172 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEGI+GAGK++H+ L + + V V+REPGGTP AE R +LL+ +D Sbjct: 5 GLFISFEGIDGAGKSSHVEGLAAAFRAQGRRVTVSREPGGTPLAEKLRALLLAERMD--- 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E+++ AAR DH+ VI PAL G ++LCDRF DS++AYQG H L L+ + Sbjct: 62 ALTESLLIFAARRDHLRQVIEPALARGDVVLCDRFTDSTFAYQGAGRGFDHETLSILERM 121 Query: 124 SVQEVM--------PDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFER 164 + P+ T+ DL ++ +R+ R E+ +++F R Sbjct: 122 TNTAAAHKDGLLPEPELTLWFDLAPELAAERMAGAAHRPDRFEAQPVEFFRR 173 >gi|50120735|ref|YP_049902.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043] gi|59798244|sp|Q6D683|KTHY_ERWCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49611261|emb|CAG74707.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043] Length = 219 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT +++ L+ +V TREPGGTP AE R ++ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKEVLFTREPGGTPLAEKLRELIKQGMA 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + PD T+ LDLP IGL+R + R LD E++ + ++ R + Sbjct: 120 SLRDTVLGNFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRTRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 +A + D +D++ S +V+ +I Sbjct: 174 ALA-AEDDSILTIDASQSIDAVSADI 198 >gi|15902879|ref|NP_358429.1| thymidylate kinase [Streptococcus pneumoniae R6] gi|116516561|ref|YP_816308.1| thymidylate kinase [Streptococcus pneumoniae D39] gi|46576561|sp|Q8DQ58|KTHY_STRR6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122278806|sp|Q04KZ0|KTHY_STRP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|15458437|gb|AAK99639.1| Thymidylate kinase [Streptococcus pneumoniae R6] gi|116077137|gb|ABJ54857.1| thymidylate kinase [Streptococcus pneumoniae D39] Length = 212 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 4/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD E D +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + +R +D++ + V Sbjct: 177 LDKEGNRIVKIDASLPLEQV 196 >gi|168494363|ref|ZP_02718506.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06] gi|221231705|ref|YP_002510857.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669] gi|254808307|sp|B8ZP37|KTHY_STRPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|183575667|gb|EDT96195.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06] gi|220674165|emb|CAR68688.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669] Length = 212 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILKEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD E D +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|257066619|ref|YP_003152875.1| thymidylate kinase [Anaerococcus prevotii DSM 20548] gi|256798499|gb|ACV29154.1| thymidylate kinase [Anaerococcus prevotii DSM 20548] Length = 209 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I FEG +G+GKTT I+ +K+ L++ + REPGGTP +E R +++ ++ Sbjct: 2 TGKLIVFEGPDGSGKTTVINEVKKRLKKDQIEYLDFREPGGTPISEKIREIIIDNDNEDM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++FAA+R +E IRPAL +GK+++CDRF+ SS YQG + + + Sbjct: 62 TSRCECLLFAASRAQLIEEKIRPALEKGKLVICDRFVLSSLLYQGVGRGLGIEKVKVIND 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + D TI D+ L R + +S D E +D H K +LDI Sbjct: 122 FATENTKADLTIFFDIDYKTALVRKRANFS------ADRLESEDFDFHRKIFDAYLDITE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D VD+ S V ++ ++++ +++ Sbjct: 176 RYKDEIKRVDATKSIDEVTDQVMELIYKSLEE 207 >gi|123441946|ref|YP_001005929.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166223129|sp|A1JN89|KTHY_YERE8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122088907|emb|CAL11714.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 212 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 116/218 (53%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58 Query: 60 DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL++ + E PD T+ LDLP IGL R + R LD E++ + E+ R+ + Sbjct: 119 TSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L++A +D++ + V+ +I ++ + + R Sbjct: 173 LELAATDSS-IKTIDASQPLEQVSESISQVLKQWLTSR 209 >gi|268589221|ref|ZP_06123442.1| dTMP kinase [Providencia rettgeri DSM 1131] gi|291315477|gb|EFE55930.1| dTMP kinase [Providencia rettgeri DSM 1131] Length = 209 Score = 112 bits (279), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 74/203 (36%), Positives = 118/203 (58%), Gaps = 13/203 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62 FI EG+EGAGKTT I+ + L + D+ TREPGGTP AE R L+ G+ D+ Sbjct: 5 FIVIEGLEGAGKTTAINTVVETLNQAGITDIVFTREPGGTPLAEKLRE-LIKQGIAGDKV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQ 121 +AE ++ AAR+ V+ VI+PAL GK ++ DR SS AYQG R+ +HL + SL+ Sbjct: 64 TDKAELLMLYAARVQLVDTVIQPALAAGKWVVGDRHDLSSQAYQGGGREIDRHL-MQSLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + + P T+ LDLP ++GL+R ++R LD E++ + E+ R +L++A Sbjct: 123 DLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRSRYLELA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 + +D++ + + V +I Sbjct: 177 AGD-ETILTIDASQNIEQVQQDI 198 >gi|148992933|ref|ZP_01822552.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68] gi|168483004|ref|ZP_02707956.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00] gi|168490250|ref|ZP_02714449.1| thymidylate kinase [Streptococcus pneumoniae SP195] gi|147928385|gb|EDK79401.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68] gi|172043528|gb|EDT51574.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00] gi|183571397|gb|EDT91925.1| thymidylate kinase [Streptococcus pneumoniae SP195] gi|332073266|gb|EGI83745.1| thymidylate kinase [Streptococcus pneumoniae GA17570] Length = 212 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|83719414|ref|YP_442675.1| thymidylate kinase [Burkholderia thailandensis E264] gi|167581613|ref|ZP_02374487.1| thymidylate kinase [Burkholderia thailandensis TXDOH] gi|167619729|ref|ZP_02388360.1| thymidylate kinase [Burkholderia thailandensis Bt4] gi|257138888|ref|ZP_05587150.1| thymidylate kinase [Burkholderia thailandensis E264] gi|123536877|sp|Q2SWM4|KTHY_BURTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|83653239|gb|ABC37302.1| thymidylate kinase [Burkholderia thailandensis E264] Length = 206 Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+P I R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPQIASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A+ P R IVDS+ + + ++ Sbjct: 172 YLRRAQEAPHRFVIVDSSEPIAQIRKQLEGVL 203 >gi|255021134|ref|ZP_05293186.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756] gi|254969394|gb|EET26904.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756] Length = 217 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F++ EGIEGAGK+T + ++R+ + + V +TREPGG P EA R + L G++ Sbjct: 9 RTGFFVTLEGIEGAGKSTALPFVQRYCMDRGWSVEITREPGGGPLGEALRAIFLDPGLEL 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +++ A R +H+ I PAL G ++LCDRF DS++AYQG + + SL Sbjct: 69 SVEEELLLLY-AGRHEHLRRKILPALQRGALVLCDRFEDSTFAYQGGGRAFPIERIQSLS 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T+ D+ IG +R++ R D ER+ + E+ R+++ Sbjct: 128 RWTRLPRSPDLTLWFDVDPAIGAERIRARNP-------DRLERESLEFFERARRVYAARM 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R + + + V + +++ E + Sbjct: 181 AAEPRRYRRICANGTLAEVEQQLASVLAECL 211 >gi|121604849|ref|YP_982178.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2] gi|120593818|gb|ABM37257.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2] Length = 260 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 29/226 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFISFEGI+GAGK+THI+ L Q + V +TREPGGT AE R+++L +D Sbjct: 31 SQGLFISFEGIDGAGKSTHIAGLADAFQSEGRAVTLTREPGGTLLAEKLRNMVLDDAMDP 90 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-------------E 108 E+++ AAR DH+ VI PAL+ G ++LCDRF D+++AYQG E Sbjct: 91 L---TESLLIFAARRDHLVRVIAPALLRGDVVLCDRFTDATFAYQGAGRGFDVKVLATLE 147 Query: 109 R--DSSQHLFLDSLQEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 R S + L D ++ + P T+ DLP + R L +S D Sbjct: 148 RWVQSGEGLLGDPAGNQPMKPEVETVIEPHLTVWFDLPPEEAALR------LADSRVPDR 201 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 FE + V + + + + P+R +D++ + ++V I + Sbjct: 202 FESQPVEFFRRVARGYAERQLGHPERFARIDASQNREAVWQGIRQV 247 >gi|19745549|ref|NP_606685.1| thymidylate kinase [Streptococcus pyogenes MGAS8232] gi|139474335|ref|YP_001129051.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo] gi|23821763|sp|Q8P2B1|KTHY_STRP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223120|sp|A2RG70|KTHY_STRPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|19747670|gb|AAL97184.1| putative thymidylate kinase [Streptococcus pyogenes MGAS8232] gi|134272582|emb|CAM30849.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo] Length = 211 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L+ Q+ ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPPLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ N RE LD + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARI-NANQQREVNRLDL---ETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|307704911|ref|ZP_07641802.1| thymidylate kinase [Streptococcus mitis SK597] gi|307621525|gb|EFO00571.1| thymidylate kinase [Streptococcus mitis SK597] Length = 212 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALETGKLVIMDRFIDSSLAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIVAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + R +D++ + V ++++ Sbjct: 177 LDKEGSRIVKIDASLPLEQVVETTKAVLFD 206 >gi|291298371|ref|YP_003509649.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728] gi|290567591|gb|ADD40556.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728] Length = 707 Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 19/208 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F+ FEG EG+GK+T L +L+++ ++V +TREPG T R +LL E G Sbjct: 469 GTFVVFEGGEGSGKSTQAVKLAAWLRQRGHEVVLTREPGATELGVRIRTLLLD---PESG 525 Query: 64 A----EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EA+++AA R HV V+RPAL G +++ DR++DSS AYQG S + L D Sbjct: 526 TSPSPRTEALLYAADRAQHVSKVVRPALDRGAVVISDRYVDSSLAYQG---SGRELPADE 582 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +S + PD ++LD+ +GL R + + D E++ + HE R+ Sbjct: 583 VAWLSHWATGGLKPDLVVLLDIDPRVGLVRAT------KGSAGDRLEQEALTFHEAVREK 636 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204 F D+A + R +VD+ S + +A + Sbjct: 637 FRDLAADDSSRYLVVDATQSPEDIAAKV 664 >gi|307701598|ref|ZP_07638615.1| dTMP kinase [Mobiluncus mulieris FB024-16] gi|307613277|gb|EFN92529.1| dTMP kinase [Mobiluncus mulieris FB024-16] Length = 238 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 23 GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 82 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ RD Sbjct: 83 EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 142 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D L + + P+ T++LDL +I +R QN + D E + + K R F Sbjct: 143 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMESEGLEFQRKVRARF 198 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 +A + + +VD++ + + +A + Sbjct: 199 RRLA-EENETWMVVDASLAPEEIAAQV 224 >gi|294671092|ref|ZP_06735947.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307200|gb|EFE48443.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 207 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 65/199 (32%), Positives = 111/199 (55%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ +GI+G+GK+TH+ ++ + +R+ V TREPGGTP E R +LLS G Sbjct: 5 FLTLDGIDGSGKSTHLETMREWFERRGMPVLFTREPGGTPLGEELRRLLLSPD-SRVGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 TETLLMFAARRQHLEDVILPALDKGIHVVSDRFTDATFAYQGGGRGIPAADIEVLENWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P+ T++LD+P+++ +R+ S D FE+++ + R+ +LD A P Sbjct: 124 GSLRPNLTLLLDVPLEVSFERIAR------SREKDRFEQEEAEFFARVRRAYLDRAAAHP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 R ++DS S + V + Sbjct: 178 QRYRVIDSNRSREEVRAAV 196 >gi|51473864|ref|YP_067621.1| thymidylate kinase [Rickettsia typhi str. Wilmington] gi|59798217|sp|Q68W53|KTHY_RICTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|51460176|gb|AAU04139.1| TMPK [Rickettsia typhi str. Wilmington] Length = 203 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 16/216 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG++G GK+T +L +L+ + V +TRE GGT AE R +L+ + Sbjct: 4 LTQGKFITFEGMDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTFVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL +G I++CDRF+DS+ YQG + + SL Sbjct: 61 ELLPMSELLQAMAARYDHMVRKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLVYSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +MPD T +D+ D +KRV +R + F+R+ + ++K F ++ Sbjct: 121 HTTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMSNKFDRRRIDFYKKIYSCFQEL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P+R + ++H N L V EL+QK + Sbjct: 175 SHRFPERIKTIKASH------LNPLE-VHELIQKHL 203 >gi|317495399|ref|ZP_07953768.1| thymidylate kinase [Gemella moribillum M424] gi|316914458|gb|EFV35935.1| thymidylate kinase [Gemella moribillum M424] Length = 208 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 64/206 (31%), Positives = 115/206 (55%), Gaps = 9/206 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG +G+GKTT I+ +L +K Y V TREPGGT +E R +L +E Sbjct: 3 GKFITVEGSDGSGKTTFINSATEYLIKKGYKVITTREPGGTVFSEKVRELLFDSS-NEID 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 A+ E+++F +R DH+ I P + EG I++CDRF+DSS AYQ R ++ +D + + Sbjct: 62 AKTESLLFCVSRRDHIIKKIIPYVEEGYIVICDRFVDSSIAYQSYGRGLNKQDIID-INK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ ++ V+IGL R + R E+ +D + + ++ ++ + +++ Sbjct: 121 YTTDGLEPDLTLYFNVDVEIGLSRTKGR---DENNRMD---NESLKFYKDVKRGYDELSN 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + R ++D+ ++ V + I+ Sbjct: 175 DYKKRIKVIDANQDYEKVEKDAFKIL 200 >gi|119714651|ref|YP_921616.1| thymidylate kinase [Nocardioides sp. JS614] gi|119535312|gb|ABL79929.1| thymidylate kinase [Nocardioides sp. JS614] Length = 222 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 115/218 (52%), Gaps = 17/218 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G+F+ EG EG+GK+T LL+ +L+ + ++V +T EPG T R ++LS Sbjct: 15 DTGVFVCLEGGEGSGKSTQSGLLRDWLETQGFEVLLTFEPGDTEVGRKLRAIVLSPETGA 74 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA + +HV+ V++PAL G +++ DR++ S AYQG + ++ + Sbjct: 75 ISDRTEALLYAADKAEHVDTVVQPALDRGAVVITDRYVASMLAYQGAGRALDVGEVEQVA 134 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ P T++LDL + GL R + R D E + V H + R+ FL +A Sbjct: 135 RWATHDLRPHLTVVLDLEPEHGLGRFEER---------DRIEGESVEFHRRVREGFLGMA 185 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 PD ++D+ + +A V+ RV+PL Sbjct: 186 AADPDHYLVLDARGDREEIAGR--------VRDRVAPL 215 >gi|306817710|ref|ZP_07451452.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239] gi|304649524|gb|EFM46807.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239] Length = 246 Score = 111 bits (278), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 108/207 (52%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 31 GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 90 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ RD Sbjct: 91 EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 150 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D L + + P+ T++LDL +I +R QN + D E + + K R F Sbjct: 151 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMEGEGLEFQRKVRARF 206 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 +A + +VD++ + + +A + Sbjct: 207 RRLAEGN-ETWMVVDASLAPEEIAAQV 232 >gi|269976291|ref|ZP_06183287.1| thymidylate kinase [Mobiluncus mulieris 28-1] gi|269935620|gb|EEZ92158.1| thymidylate kinase [Mobiluncus mulieris 28-1] Length = 246 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 31 GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 90 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ RD Sbjct: 91 EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 150 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D L + + P+ T++LDL +I +R QN + D E + + K R F Sbjct: 151 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMEGEGLEFQRKVRARF 206 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 +A + + +VD++ + + +A + Sbjct: 207 RRLA-EENETWMVVDASLTPEEIAAQV 232 >gi|254415334|ref|ZP_05029095.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420] gi|196177809|gb|EDX72812.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420] Length = 213 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 17/211 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-------NY----DVHVTREPGGTPAAEAARHV 53 + I FEG+EG+GKTT I + + NY V +TREPGGT R + Sbjct: 1 MLIVFEGVEGSGKTTQIQRSRDWFLSSGILDTLGNYHKPPPVIITREPGGTALGIKLRQL 60 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 LL E +++AA R HVE +++P L G I+LCDR+ DS+ AYQG Sbjct: 61 LLQEQSSSLQHRTELLLYAADRSQHVEELLQPQLDAGAIILCDRYTDSTIAYQGYGRGID 120 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++ + I+ + D T+ LD+ V IGL+R RE D E+ ++ H++ Sbjct: 121 LALIEQINHIATGGLESDLTLWLDVDVTIGLQRA------RERGVADRMEQAELTFHQRV 174 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 +Q F +A P R +D+ S ++V +I Sbjct: 175 QQGFAQLASQHPQRIVRIDANQSPEAVQRDI 205 >gi|222474809|ref|YP_002563224.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida] gi|255002779|ref|ZP_05277743.1| thymidylate kinase [Anaplasma marginale str. Puerto Rico] gi|255003913|ref|ZP_05278714.1| thymidylate kinase [Anaplasma marginale str. Virginia] gi|254808273|sp|B9KHK6|KTHY_ANAMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|222418945|gb|ACM48968.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida] Length = 211 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G GKTT LL ++L + V +TREPGGT E R LL + Sbjct: 1 MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GKI++ DRF DS+ AYQG + L Sbjct: 61 DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V +V+PD T ++D +++ L R L+ FE +++ R+ F I Sbjct: 121 L-VADVVPDITFVIDASIELALARTS----------LNGFENHGPEFYDRVREGFRTIVA 169 Query: 183 NQPDRCHIVD 192 N P RCH++D Sbjct: 170 NNPHRCHMID 179 >gi|119509052|ref|ZP_01628203.1| Thymidylate kinase [Nodularia spumigena CCY9414] gi|119466218|gb|EAW47104.1| Thymidylate kinase [Nodularia spumigena CCY9414] Length = 207 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 8/209 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI FEG+EG GKT+ + L ++LQ V VTREPGGT R +LL ++ Sbjct: 2 AGKFIVFEGVEGCGKTSQMQLCCQWLQNLGISVVVTREPGGTELGLHLRRLLLEKVENQP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E +++AA R HVE ++P L GK +LCDR+ DS+ AYQG + ++ L Sbjct: 62 IAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTTAYQGYGRALNMSLINQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ + D TI LD+ V++GL R Q D E++ + H + +Q + ++A Sbjct: 122 YIATAGLESDLTIWLDVDVEVGLARKQGDK-------FDRIEQETIDFHRRVQQGYSELA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P R VD + S +V I I+ E Sbjct: 175 ASYPSRIIRVDGSLSQAAVQEIIQEILRE 203 >gi|56416439|ref|YP_153513.1| thymidylate kinase [Anaplasma marginale str. St. Maries] gi|81599204|sp|Q5PBS1|KTHY_ANAMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56387671|gb|AAV86258.1| thymidylate kinase [Anaplasma marginale str. St. Maries] Length = 211 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 66/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G GKTT LL ++L + V +TREPGGT E R LL + Sbjct: 1 MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GKI++ DRF DS+ AYQG + L Sbjct: 61 DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V +V+PD T ++D +++ L R L+ FE +++ R+ F I Sbjct: 121 L-VADVVPDITFVIDASIELALARTS----------LNGFENHGPEFYDRVREGFRTIVA 169 Query: 183 NQPDRCHIVD 192 N P RCH++D Sbjct: 170 NNPHRCHMID 179 >gi|257064315|ref|YP_003143987.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476] gi|256791968|gb|ACV22638.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476] Length = 234 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 15/217 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G+FI+FEG EGAGK+THI+ L + L+ ++V REPG T E R V+L E Sbjct: 7 HTGVFITFEGGEGAGKSTHINFLAQTLEACGFEVVRVREPGSTRIGEQLRGVVLDPENAE 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++ AAR V I+PAL G I+LCDRF DS+ AYQG + L LD ++ Sbjct: 67 MADWTELFIYEAARAQLVAEAIKPALERGAIVLCDRFTDSTLAYQG---YGRGLELDRVR 123 Query: 122 ---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E++ Q ++PD T+++ P ++ Y + D E H + Q F+ Sbjct: 124 RANELACQGIVPDATVLMVAP-----NALEGLYRATKDDGADRLESAGHDFHVRVNQAFV 178 Query: 179 DIARNQPDRCHIVDSAH----SFQSVATNILNIVWEL 211 ++A R +V SA + QSV + +++ +L Sbjct: 179 ELAAQSKKRIRMVQSASAKSLTSQSVFKALADVLPQL 215 >gi|71894076|ref|YP_278184.1| thymidylate kinase [Mycoplasma synoviae 53] gi|123644541|sp|Q4A6Z8|KTHY_MYCS5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71850864|gb|AAZ43473.1| thymidylate kinase [Mycoplasma synoviae 53] Length = 214 Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 13/208 (6%) Query: 5 LFISFEGIEGAGKTTHIS-LLKRFLQR-KNYDVHVTREPGGT--PAAEAARHVLLSCGVD 60 +FI+FEG++G+GKTT I+ LLK+ K D +TREPGG +E R ++L + Sbjct: 1 MFITFEGLDGSGKTTVINELLKKLKDNFKFLDYVLTREPGGKDIKESEKIREMILDSDL- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EF EA+++ +R H++ VI PAL + KI+ CDR+ DS YAYQG + F +L Sbjct: 60 EFSPITEALLYTTSRRIHIDKVILPALAQNKIVFCDRYYDSFYAYQGYGRNLGMEFTKTL 119 Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 E++V + +P+ T D+ P + +R +N + D E +D+ H + + +L+ Sbjct: 120 TELAVGKTIPNLTFFFDISPFETRKRRSEN------NLINDRLELEDLSFHNRVYEGYLE 173 Query: 180 IAR-NQPDRCHIVDSAHSFQSVATNILN 206 I + N+ +R +VD+ + I N Sbjct: 174 IIKNNKENRFVVVDATKPVNEIVDFIFN 201 >gi|157961746|ref|YP_001501780.1| thymidylate kinase [Shewanella pealeana ATCC 700345] gi|157846746|gb|ABV87245.1| dTMP kinase [Shewanella pealeana ATCC 700345] Length = 214 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59 S FI EG+EGAGK++ I+L++ F+++ + TREPGGTP AE R ++ ++ Sbjct: 9 QSAKFIVIEGLEGAGKSSAIALVRDFIEKHTGKAPICTREPGGTPLAEQMRDLVKIANES 68 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++F AAR V NVI+PAL G+ +L DR SS AYQG L + + Sbjct: 69 DPLCDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRKLMPL-VSA 127 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +++ PD T+ LD+ +GL+R R LD E++++ ++ R FL Sbjct: 128 ISDATLKGFKPDLTLYLDIDPKLGLERAARRGE------LDRIEQQEIEFFKRTRATFLS 181 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A + + IVD++ S V +I+ ++ E Sbjct: 182 FA-DADESIKIVDASQSMAEVHKDIIALLQE 211 >gi|51596788|ref|YP_070979.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953] gi|153946978|ref|YP_001400560.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758] gi|186895859|ref|YP_001872971.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+] gi|59798199|sp|Q669L8|KTHY_YERPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166987710|sp|A7FH32|KTHY_YERP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238691421|sp|B2K751|KTHY_YERPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|51590070|emb|CAH21704.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953] gi|152958473|gb|ABS45934.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758] gi|186698885|gb|ACC89514.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+] Length = 212 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58 Query: 60 DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL++ + E PD T+ LDLP +GL R + R LD E++ + E+ R + Sbjct: 119 ASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L++A + +D++ + V+ +I Sbjct: 173 LELAASDAS-IKTIDASQPIEQVSASI 198 >gi|168491022|ref|ZP_02715165.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04] gi|183574610|gb|EDT95138.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04] Length = 212 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|190573065|ref|YP_001970910.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a] gi|190010987|emb|CAQ44596.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a] Length = 221 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 16/215 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDE 61 F+S EG EGAGKTT I+ ++ L+ ++V +TREPGGTP AE R ++L + Sbjct: 11 FVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEAE ++ AAR HV VI+PAL G +L DRF DSSYAYQG ++ L+ Sbjct: 71 LSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADLE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178 +V + T++LD+ V +G R R + R ES D+F+R R++F Sbjct: 131 RRAVGLLP-GLTLLLDVDVAVGRARANGRDLWPDRIESEQDDFFQRV--------REVFR 181 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ P R ++D+ VA +++ V +Q Sbjct: 182 SRAQQDPQRFALIDAGQEQARVAADVVARVERWLQ 216 >gi|227876763|ref|ZP_03994872.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|227842660|gb|EEJ52860.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] Length = 246 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----- 58 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 31 GAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETTVC 90 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFL 117 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ RD Sbjct: 91 EGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKEIR 150 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D L + + P+ T++LDL +I +R QN + D E + + K R F Sbjct: 151 D-LSLWATGGLTPNLTVLLDLDPEIAWERQQNDET---RVSPDRMEGEGLEFQRKVRARF 206 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 +A + + +VD++ + + +A + Sbjct: 207 RRLA-EENETWMVVDASLAPEEIAAQV 232 >gi|194364655|ref|YP_002027265.1| dTMP kinase [Stenotrophomonas maltophilia R551-3] gi|194347459|gb|ACF50582.1| dTMP kinase [Stenotrophomonas maltophilia R551-3] Length = 221 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 116/215 (53%), Gaps = 16/215 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDE 61 F+S EG EGAGKTT I+ ++ L+ ++V +TREPGGTP AE R ++L + Sbjct: 11 FVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEAE ++ AAR HV VI+PAL G +L DRF DSSYAYQG ++ L+ Sbjct: 71 LSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDLQWIADLE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178 +V + T++LD+ V +G R R + R ES D+F+R R++F Sbjct: 131 RRAVGLLP-GLTLLLDVEVAVGRARANGRDLWPDRIESEQDDFFQRV--------REVFR 181 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ P R ++D+ + VA +++ V +Q Sbjct: 182 SRAQQDPQRFALIDAGQVQERVAADVVACVERWLQ 216 >gi|225856597|ref|YP_002738108.1| thymidylate kinase [Streptococcus pneumoniae P1031] gi|254808310|sp|C1CK20|KTHY_STRZP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225725389|gb|ACO21241.1| thymidylate kinase [Streptococcus pneumoniae P1031] gi|301794077|emb|CBW36481.1| thymidylate kinase [Streptococcus pneumoniae INV104] Length = 212 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD E D +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|12044856|ref|NP_072666.1| thymidylate kinase [Mycoplasma genitalium G37] gi|255660021|ref|ZP_05405430.1| thymidylate kinase [Mycoplasma genitalium G37] gi|1351454|sp|P47252|KTHY_MYCGE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1045674|gb|AAC71222.1| thymidylate kinase [Mycoplasma genitalium G37] gi|166078870|gb|ABY79488.1| thymidylate kinase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 210 Score = 111 bits (277), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 61/155 (39%), Positives = 98/155 (63%), Gaps = 11/155 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCG 58 MN G+F+ EG++GAGKT I K+ K NY + TREPGGT AE R +LL+ Sbjct: 1 MNKGVFVVIEGVDGAGKTALIEGFKKLYPTKFLNYQLTYTREPGGTLLAEKIRQLLLNET 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ EA +FAAAR +H+ +I+PA+ + ++++ DRF+ SS+AYQG S+ + +D Sbjct: 61 MEPL---TEAYLFAAARTEHISKLIKPAIEKEQLVISDRFVFSSFAYQG---LSKKIGID 114 Query: 119 SLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNR 150 ++++I +++ +MP+ T ILD L+R+Q R Sbjct: 115 TVKQINHHALRNMMPNFTFILDCNFKEALQRMQKR 149 >gi|254994671|ref|ZP_05276861.1| thymidylate kinase [Anaplasma marginale str. Mississippi] Length = 211 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 13/190 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +F++FEGI+G GKTT LL ++L + V +TREPGGT E R LL + Sbjct: 1 MFVTFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GKI++ DRF DS+ AYQG + L Sbjct: 61 DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V +V+PD T ++D +++ L R L+ FE +++ R+ F I Sbjct: 121 L-VADVVPDITFVIDASIELALARTS----------LNGFENHGPEFYDRVREGFRTIVA 169 Query: 183 NQPDRCHIVD 192 N P RCH++D Sbjct: 170 NNPHRCHMID 179 >gi|22125658|ref|NP_669081.1| thymidylate kinase [Yersinia pestis KIM 10] gi|45442039|ref|NP_993578.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001] gi|108807915|ref|YP_651831.1| thymidylate kinase [Yersinia pestis Antiqua] gi|108812186|ref|YP_647953.1| thymidylate kinase [Yersinia pestis Nepal516] gi|145599124|ref|YP_001163200.1| thymidylate kinase [Yersinia pestis Pestoides F] gi|149366521|ref|ZP_01888555.1| thymidylate kinase [Yersinia pestis CA88-4125] gi|162421207|ref|YP_001607823.1| thymidylate kinase [Yersinia pestis Angola] gi|165925614|ref|ZP_02221446.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. F1991016] gi|165940160|ref|ZP_02228692.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275] gi|166008626|ref|ZP_02229524.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210903|ref|ZP_02236938.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401793|ref|ZP_02307284.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421799|ref|ZP_02313552.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167427086|ref|ZP_02318839.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470268|ref|ZP_02334972.1| thymidylate kinase [Yersinia pestis FV-1] gi|218928741|ref|YP_002346616.1| thymidylate kinase [Yersinia pestis CO92] gi|229841590|ref|ZP_04461748.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843706|ref|ZP_04463849.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India 195] gi|229894450|ref|ZP_04509632.1| thymidylate kinase [Yersinia pestis Pestoides A] gi|229902510|ref|ZP_04517629.1| thymidylate kinase [Yersinia pestis Nepal516] gi|270490312|ref|ZP_06207386.1| dTMP kinase [Yersinia pestis KIM D27] gi|294504194|ref|YP_003568256.1| thymidylate kinase [Yersinia pestis Z176003] gi|6016463|sp|O69169|KTHY_YERPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123072761|sp|Q1C6N6|KTHY_YERPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123073357|sp|Q1CI27|KTHY_YERPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223130|sp|A4TLR5|KTHY_YERPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687291|sp|A9R3P0|KTHY_YERPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21958570|gb|AAM85332.1|AE013779_6 thymidylate kinase [Yersinia pestis KIM 10] gi|3176887|gb|AAC18855.1| thymidylate kinase [Yersinia pestis] gi|45436902|gb|AAS62455.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001] gi|108775834|gb|ABG18353.1| thymidylate kinase [Yersinia pestis Nepal516] gi|108779828|gb|ABG13886.1| thymidylate kinase [Yersinia pestis Antiqua] gi|115347352|emb|CAL20250.1| thymidylate kinase [Yersinia pestis CO92] gi|145210820|gb|ABP40227.1| thymidylate kinase [Yersinia pestis Pestoides F] gi|149290895|gb|EDM40970.1| thymidylate kinase [Yersinia pestis CA88-4125] gi|162354022|gb|ABX87970.1| thymidylate kinase [Yersinia pestis Angola] gi|165911906|gb|EDR30551.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275] gi|165922723|gb|EDR39874.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. F1991016] gi|165993008|gb|EDR45309.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001] gi|166208083|gb|EDR52563.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960284|gb|EDR56305.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048898|gb|EDR60306.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167053930|gb|EDR63762.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680556|gb|EEO76653.1| thymidylate kinase [Yersinia pestis Nepal516] gi|229689314|gb|EEO81377.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India 195] gi|229694053|gb|EEO84101.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703469|gb|EEO90486.1| thymidylate kinase [Yersinia pestis Pestoides A] gi|262362311|gb|ACY59032.1| thymidylate kinase [Yersinia pestis D106004] gi|270338816|gb|EFA49593.1| dTMP kinase [Yersinia pestis KIM D27] gi|294354653|gb|ADE64994.1| thymidylate kinase [Yersinia pestis Z176003] gi|320014746|gb|ADV98317.1| thymidylate kinase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 212 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTTRDTVVAVLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58 Query: 60 DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL++ + E PD T+ LDLP +GL R + R LD E++ + E+ R + Sbjct: 119 ASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L++A + +D++ + V+ +I Sbjct: 173 LELAASDAS-IKTIDASQPIEQVSASI 198 >gi|317120927|ref|YP_004100930.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885] gi|315590907|gb|ADU50203.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885] Length = 238 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 111/205 (54%), Gaps = 9/205 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FIS EG EG+GK+T +++ +L+ + + REPGGTP E R +LL+ G Sbjct: 27 GWFISLEGGEGSGKSTQAAVVMDWLRSRGMPCRLVREPGGTPLGERLRELLLN-GTGRPV 85 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++FAAAR VE VI P+L+ G+ ++CDR++DSS AYQG + S Sbjct: 86 PVAEMLLFAAARAQLVETVILPSLLAGETVVCDRYVDSSLAYQGSGLGLGWEAVWSANRW 145 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + +MPD T++ D P + L R ++R D ER+ H + R+ + +AR Sbjct: 146 ATRGIMPDLTLLFDCPPE--LARARHRRP------GDDIERRGQGFHRRVREGYRALARA 197 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +R ++D++ VA + ++ Sbjct: 198 HGNRVVVIDASRPALEVAAEVRRVL 222 >gi|170023932|ref|YP_001720437.1| thymidylate kinase [Yersinia pseudotuberculosis YPIII] gi|238688405|sp|B1JI38|KTHY_YERPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169750466|gb|ACA67984.1| dTMP kinase [Yersinia pseudotuberculosis YPIII] Length = 212 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 111/207 (53%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58 Query: 60 DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL++ + E PD T+ LDLP +GL R + R LD E++ + E+ R + Sbjct: 119 ASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L++A + +D++ + V+ +I Sbjct: 173 LELAASDAS-IKTIDASQPIEQVSASI 198 >gi|300814241|ref|ZP_07094517.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511665|gb|EFK38889.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 202 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 11/204 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG +G GK+T +L+ L ++N +V TREPGGT +EA R ++L+ E Sbjct: 3 LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYREMDY 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I+PAL GK++LC+RF+ SS AYQG + + ++ E + Sbjct: 63 RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I + ++++N D ER H K R + ++ + Sbjct: 123 TMGLEPDIVFIFLNKEETLARKLEN---------ADRLERAGDDFHNKVRDFYKNLQK-- 171 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 D + +D+ S V ++ L ++ Sbjct: 172 KDNYYFIDAWQSIDKVFSDTLEVL 195 >gi|169832724|ref|YP_001694387.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6] gi|238688287|sp|B1IBA2|KTHY_STRPI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|168995226|gb|ACA35838.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6] Length = 212 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEVKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD E D +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLD-LEGLD--LHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|293391495|ref|ZP_06635829.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952029|gb|EFE02148.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 210 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 8/206 (3%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T H ++ +V TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRHLIKHENEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L SL++ Sbjct: 63 TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ +GL R + R LD E+++ + R +L++ + Sbjct: 123 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + I+D+A + V +I + V Sbjct: 177 DNP-KAVIIDAAQPVEQVRADIQSAV 201 >gi|332162101|ref|YP_004298678.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606150|emb|CBY27648.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666331|gb|ADZ42975.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 212 Score = 111 bits (277), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRD-LIKQGI 58 Query: 60 DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 DGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL++ + E PD T+ LDLP IGL R + R LD E++ + E+ R+ + Sbjct: 119 TSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L +A +D++ + V+ +I ++ + + R Sbjct: 173 LKLAATDSS-IKTIDASQPLEQVSESISRVLKQWLTSR 209 >gi|220903414|ref|YP_002478726.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254808288|sp|B8J2G0|KTHY_DESDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219867713|gb|ACL48048.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 217 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 119/215 (55%), Gaps = 7/215 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEGIEGAGK+T I L +LQ + +D +TREPGG+ R +LL + Sbjct: 1 MFVTFEGIEGAGKSTAIDYLSDYLQARGHDPVLTREPGGSALGRRLRALLLDVRTGGLAS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R HV VIRPAL G+++LCDRF DS+ AYQG +L SL + Sbjct: 61 RAELFLFLADRAQHVTEVIRPALEAGQVVLCDRFTDSTLAYQGYGRGLDTEYLRSLNTAA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFERKDVMIHEKRRQIFLDI 180 + PD T++LDLPV GL+R R SA + F+ + + HE+ R+ + + Sbjct: 121 TGGLEPDLTLLLDLPVRCGLERAGER---NRSAGMVIAEGRFDSESLDFHERVRRGYRAL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A +P+R I+D++ + V + + +++R Sbjct: 178 AEEEPERFAIIDASQPPEDVVLQCRSAIEAYLRRR 212 >gi|22299598|ref|NP_682845.1| thymidylate kinase [Thermosynechococcus elongatus BP-1] gi|46576557|sp|Q8DHA4|KTHY_THEEB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|22295782|dbj|BAC09607.1| thymidylate kinase [Thermosynechococcus elongatus BP-1] Length = 241 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 103/204 (50%), Gaps = 22/204 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHV------TREPGGTPAAEAAR 51 +GLFI EG EGAGKTT + + +L+ + HV TREPGGTP + R Sbjct: 9 AGLFIVLEGGEGAGKTTQMGAIATWLENSGWLAKLRSCHVDPPLLLTREPGGTPLGQGLR 68 Query: 52 HVLL--SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 +LL +D AE +++AA R HV IRP L G I+LCDR+ S+ AYQG Sbjct: 69 QLLLHSDLAIDPL---AELLLYAADRAQHVAMGIRPQLQRGGIVLCDRYTASTVAYQGYG 125 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + +++ + D + LDLPV +GL R Q R D E+ V Sbjct: 126 RGLDLQIIQHINQMATGGLGADLVLWLDLPVAVGLARTQQR------GRGDRLEQNAVAF 179 Query: 170 HEKRRQIFLDIARNQPDRCHIVDS 193 HE+ RQ FL +A+ DR +D+ Sbjct: 180 HERVRQGFLALAQQGSDRWQRIDA 203 >gi|294636822|ref|ZP_06715157.1| dTMP kinase [Edwardsiella tarda ATCC 23685] gi|291089965|gb|EFE22526.1| dTMP kinase [Edwardsiella tarda ATCC 23685] Length = 213 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 107/201 (53%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63 FI EG+EGAGKTT ++ L+R +V TREPGGTP AE R ++ C + Sbjct: 5 FIVIEGLEGAGKTTARDVVVEELRRHGVQEVVFTREPGGTPLAEQLRQLVKEGCAGETLT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG L +L++ Sbjct: 65 DRAEVLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGIDPQLLQTLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+ LD+P + GL R ++R LD ER+ + E+ R +L +A + Sbjct: 125 VLGSFKPDLTLYLDIPPEQGLARARSR------GELDRIERESLAFFERTRARYLALA-S 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 Q +R +D++ V+ I Sbjct: 178 QDERIVTLDASQPLAQVSDAI 198 >gi|262276042|ref|ZP_06053851.1| thymidylate kinase [Grimontia hollisae CIP 101886] gi|262219850|gb|EEY71166.1| thymidylate kinase [Grimontia hollisae CIP 101886] Length = 211 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 13/208 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EG+EGAGKTT I + L+ + + TREPGGTP AE R ++ Sbjct: 1 MKNGKFIVVEGLEGAGKTTAIRNVIDILKAQGIAHIETTREPGGTPLAEQMRTLVKEGHP 60 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE AE ++ AAR+ V+NVI+PAL +G ++ DR SS AYQG + Sbjct: 61 DEPLTDMAELLLLYAARIQLVDNVIKPALAKGAYVVGDRHDMSSQAYQGGGRGFDKALMQ 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176 +L++ + + PD T+ LDL IGL+R + R L E LD+F R R Sbjct: 121 NLRDTVLGDFRPDFTLYLDLDPAIGLERARARGELDRIEQMELDFFHRT--------RAR 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204 +L++A N+ + I+D++ S ++V+ +I Sbjct: 173 YLELA-NEDENVVIIDASQSIENVSADI 199 >gi|251789239|ref|YP_003003960.1| thymidylate kinase [Dickeya zeae Ech1591] gi|247537860|gb|ACT06481.1| thymidylate kinase [Dickeya zeae Ech1591] Length = 215 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 71/169 (42%), Positives = 97/169 (57%), Gaps = 6/169 (3%) Query: 1 MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGKT+ H +++ +DV TREPGGTP AE R L+ GV Sbjct: 1 MNNSKFIVIEGLEGAGKTSAHAVVVETLRSFGIHDVVFTREPGGTPLAEKLR-TLIKQGV 59 Query: 60 --DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +AE ++ AAR+ VENVIRPAL G ++ DR SS AYQG + Sbjct: 60 AGETLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDPHLM 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 SL++ + + PD T+ LD+P ++GLKR + R L E L +FER Sbjct: 120 TSLRDTVLGDFRPDLTLYLDIPPELGLKRARQRGELDRIEQESLAFFER 168 >gi|124515019|gb|EAY56530.1| Thymidylate kinase [Leptospirillum rubarum] Length = 220 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 111/205 (54%), Gaps = 6/205 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G+ I+FEGI+G+GK+T + L V ++REPG TP E R +LLS V Sbjct: 5 DTGILITFEGIDGSGKSTQAREIHNALSLAGLKVRLSREPGATPLGEEIRKILLSDSV-P 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G AE ++F A R HV++V+RP+ G+ILL DRF D++ AYQG +++L Sbjct: 64 VGNLAELLLFLADRAQHVQDVLRPSRSSGEILLVDRFTDATTAYQGYGMGHPLPLIETLH 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +Q++ P T +LD+ +R++ R + + E + + K R +L++A Sbjct: 124 KTILQDIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFRKVRNGYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206 + P R ++D+ + + +IL Sbjct: 179 KQNPHRFCVLDATLPREELTRSILK 203 >gi|293365189|ref|ZP_06611906.1| thymidylate kinase [Streptococcus oralis ATCC 35037] gi|307703727|ref|ZP_07640668.1| thymidylate kinase [Streptococcus oralis ATCC 35037] gi|291316639|gb|EFE57075.1| thymidylate kinase [Streptococcus oralis ATCC 35037] gi|307622562|gb|EFO01558.1| thymidylate kinase [Streptococcus oralis ATCC 35037] Length = 212 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVSIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFD 206 >gi|297582371|ref|YP_003698151.1| thymidylate kinase [Bacillus selenitireducens MLS10] gi|297140828|gb|ADH97585.1| thymidylate kinase [Bacillus selenitireducens MLS10] Length = 210 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 67/204 (32%), Positives = 113/204 (55%), Gaps = 10/204 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG EGAGKT+ + L + L + +DV +TREPGG+ AE R V+L E Sbjct: 7 FITVEGGEGAGKTSVLKDLHQALILEGHDVLMTREPGGSVIAEKIRDVILDPAHKEMDDR 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123 EA+++AAAR H+ + P L +G ++LCDR++DSS YQG ++ + ++ ++E+ Sbjct: 67 TEALLYAAARRQHLTEKVLPHLEKGGVVLCDRYVDSSLVYQG---GARGIGIEEVRELNH 123 Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T D+ ++GL R+ RE LD + + HE+ R +L +A+ Sbjct: 124 FATEAFYPGKTFYFDVSPEVGLGRIAANKG-REFNRLD---GESLAFHEQVRATYLTLAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILN 206 +P R ++D+ + V ++L Sbjct: 180 EEPARITVIDAERTQDEVLRDVLQ 203 >gi|310830718|ref|YP_003965819.1| Thymidylate kinase [Paenibacillus polymyxa SC2] gi|309250185|gb|ADO59751.1| Thymidylate kinase [Paenibacillus polymyxa SC2] Length = 210 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 4/202 (1%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 +S EG EGAGK+ I +K +TREPGG AE R ++L Sbjct: 1 MSLEGGEGAGKSLVIQAIKDHFAESGKPYLITREPGGIEIAEKIRTIILEPSHTSMDGRT 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 EA+++AAAR H+ + PA+ +G ++CDRF+DSS YQG + L + +++ Sbjct: 61 EALLYAAARRQHLVEKVFPAINQGTTVICDRFIDSSLVYQGYARGLGFETILELNQFAIE 120 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 MPD TI LD+ +GL+R+ +R + RE LD + V HEK + + P+ Sbjct: 121 GCMPDVTIWLDVDPKVGLERI-SRNNEREVNRLDL---ESVRFHEKVHMGYQILHAMYPE 176 Query: 187 RCHIVDSAHSFQSVATNILNIV 208 R H +D+ + + V +++ ++ Sbjct: 177 RIHKIDANQTPEDVVKDVIKVI 198 >gi|300704091|ref|YP_003745693.1| thymidylate kinase [Ralstonia solanacearum CFBP2957] gi|299071754|emb|CBJ43078.1| thymidylate kinase [Ralstonia solanacearum CFBP2957] Length = 205 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 105/195 (53%), Gaps = 13/195 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L+ Q + P T++ DL +I R L ++ D FE + + R +L Sbjct: 119 ALEHWVQQGLQPTKTLLFDLAPEIAAAR------LADARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDS 193 A P+R I+D+ Sbjct: 173 RRAAADPERFVIIDA 187 >gi|317492364|ref|ZP_07950793.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919703|gb|EFV41033.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 213 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 110/202 (54%), Gaps = 11/202 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT + L+++ D+ TREPGGTP AE R L+ GV+ + Sbjct: 5 FIVIEGLEGAGKTTARDTVVDVLRQQGIQDIVFTREPGGTPLAEKLRD-LVKQGVENEKL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ V+NVI+PAL G ++ DR SS AYQG + SL++ Sbjct: 64 TDKAEVLMLYAARVQLVDNVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDSRLMQSLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LDLP IGL+R ++R LD E++ + E+ R +L++A Sbjct: 124 TVLGDFKPDLTLYLDLPPAIGLERARSR------GALDRIEKESLAFFERTRTRYLELA- 176 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 Q VD++ + V I Sbjct: 177 AQDASIITVDASQTLPEVTAAI 198 >gi|37520247|ref|NP_923624.1| thymidylate kinase [Gloeobacter violaceus PCC 7421] gi|46576425|sp|Q7NMT7|KTHY_GLOVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|35211240|dbj|BAC88619.1| thymidylate kinase [Gloeobacter violaceus PCC 7421] Length = 212 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 105/204 (51%), Gaps = 5/204 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG GKTT ++LL +L+++ + V TREPGGT A + LL E Sbjct: 1 MFITFEGGEGCGKTTQLTLLGDWLEKRCHRVVRTREPGGT-ALGRSLRGLLLDARSEITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++A R +H+ V+RPAL G +LCDRF DS+ AYQG ++ L I+ Sbjct: 60 TAELLLYATDRAEHLARVVRPALASGAAVLCDRFSDSTVAYQGYGRGLDLGLIERLNAIA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T L L GL R R + D E + + H++ F +A Sbjct: 120 TGGLLPDLTFWLKLDPQAGLVR---RLA-SNGNTPDRIEAETLAFHQRVHMGFAALANRY 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 P R VD+ S ++ A I + V Sbjct: 176 PGRIRPVDAGLSVEATAEQIRSAV 199 >gi|300716239|ref|YP_003741042.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661] gi|299062075|emb|CAX59191.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661] Length = 210 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 11/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT ++ L+ + D+ TREPGGTP AE R L+ G+D Sbjct: 5 FIVIEGLEGAGKTTARDVVVATLREQGISDIVFTREPGGTPLAEKLRD-LIKQGIDGERV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + L+ Sbjct: 64 TDQAELLMLYAARVQLVENVIKPALASGAWVVGDRHDLSSQAYQGGGRGMDIALMSQLKH 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + E PD TI LD+ +IGL+R + R LD E++ + + RQ +L++A Sbjct: 124 SVLGEFAPDMTIYLDVTPEIGLQRARAR------GELDRIEQESLNFFIRTRQRYLELAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + R VD+ S + V+ +I ++ Sbjct: 178 SD-SRIQTVDATQSIEQVSASIRQVL 202 >gi|319793761|ref|YP_004155401.1| thymidylate kinase [Variovorax paradoxus EPS] gi|315596224|gb|ADU37290.1| thymidylate kinase [Variovorax paradoxus EPS] Length = 218 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 14/209 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLF++ EGI+GAGK++H+ ++ + + V TREPGGTP AE R ++L +D Sbjct: 1 MSEGLFLTLEGIDGAGKSSHLDAMEALFKAQGRTVVRTREPGGTPLAETLRGLILEQPMD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+++ AAR DH+ VI PAL G ++LCDRF D+++AYQG L +L Sbjct: 61 PL---TESLLVFAARRDHIVQVIEPALARGDLVLCDRFTDATFAYQGAGRGFDAAVLSTL 117 Query: 121 QEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + + P T+ DL +I +R+ + D FE + V + Q Sbjct: 118 EQWAQGGRAEGLLQPHITLWFDLAPEIAAQRLAG------ARVPDKFEAQPVEFFRRVAQ 171 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + D A R +D++ + V I Sbjct: 172 GYADRADADAQRFIRIDASQARDQVWQQI 200 >gi|227111684|ref|ZP_03825340.1| thymidylate kinase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 219 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 112/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT +++ L+ DV TREPGGTP AE R ++ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGIA 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ V+NVI+PAL G ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R R+ LD E++ + ++ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRA------RQRGELDRIEQESLAFFDRTRSRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + D +D++ +V+ +I Sbjct: 174 ELA-AEDDSILTIDASQPIDAVSADI 198 >gi|229587042|ref|YP_002845543.1| thymidylate kinase [Rickettsia africae ESF-5] gi|259494279|sp|C3PLG0|KTHY_RICAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|228022092|gb|ACP53800.1| Thymidylate kinase [Rickettsia africae ESF-5] Length = 203 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPISELLQVMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA 194 + P+R + ++ Sbjct: 175 SNRFPERIKTIKAS 188 >gi|241663065|ref|YP_002981425.1| thymidylate kinase [Ralstonia pickettii 12D] gi|240865092|gb|ACS62753.1| thymidylate kinase [Ralstonia pickettii 12D] Length = 205 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 114/213 (53%), Gaps = 19/213 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + LQ K V VTREPGGT E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTSLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A R +H+ VI+PAL G ++ DRF D+++AYQG + L +D Sbjct: 60 -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQG---GGRGLAID 115 Query: 119 SLQ--EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L+ E VQ+ + P TI+ DL +I R L ++ D FE + + R Sbjct: 116 RLEVLERWVQQGLQPTKTILFDLAPEIAAAR------LADARTPDKFEAESAQFFLRTRA 169 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A +PDR ++++ + ++ N++ Sbjct: 170 EYLRRAAAEPDRFVVLNANRERADIQKDLENVL 202 >gi|325849205|ref|ZP_08170656.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480205|gb|EGC83272.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 209 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 117/216 (54%), Gaps = 12/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GL I FEG +G+GKTT + + L + YD++ REPGGT +E R ++L + Sbjct: 2 NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA+R +E +RP L +G I+LCDRF+ SS YQG + L +D +++ Sbjct: 62 SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQG---IGRGLGIDEVKK 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I ++ E+ D T+ L++ + R R++ D E +D H+K + ++D Sbjct: 119 INDFAIGEIKADLTLFLNIDYKTAIDRK------RKNFVSDRLENEDDSFHKKTYEGYID 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +++ D +D+ S V N ++ + ++++ Sbjct: 173 LSKRFKDEIISIDANKSLDIVVDNCIDTIKTYIKEK 208 >gi|167586965|ref|ZP_02379353.1| dTMP kinase [Burkholderia ubonensis Bu] Length = 201 Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 104/205 (50%), Gaps = 15/205 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MARGRFITFEGIDGAGKTTHLEWFCERLQDKLAGAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + +R R +A + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASER-------RGAARMPDKFESESDAFFARTRG 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSV 200 +L A P R IVD+ S + Sbjct: 171 EYLRRAAEAPHRFAIVDATQSIPEI 195 >gi|127512508|ref|YP_001093705.1| dTMP kinase [Shewanella loihica PV-4] gi|166223116|sp|A3QD98|KTHY_SHELP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|126637803|gb|ABO23446.1| thymidylate kinase [Shewanella loihica PV-4] Length = 210 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 10/209 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59 NS FI EG+EGAGK++ I+L++ F+++ N V TREPGGTP AE R ++ ++ Sbjct: 4 NSAKFIVIEGLEGAGKSSAIALVRDFIEKHNGVPPVCTREPGGTPLAERIRDLVKIADPN 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D E+E ++ AAR V NVI+PAL +G +L DR SS AYQG L +++ Sbjct: 64 DPLCDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRQLMPL-VEA 122 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++++ PD T+ LD+ +GL+R ++R LD E++ + E+ R +L Sbjct: 123 VSQATLKDFKPDLTLYLDIDPQLGLQRARDR------GALDRIEQQALSFFERARATYLQ 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A + ++D++ + V IL ++ Sbjct: 177 LAARD-ESIVVIDASQTMAQVHKEILAVL 204 >gi|187931061|ref|YP_001891045.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica FSC147] gi|238691529|sp|B2SF22|KTHY_FRATM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187711970|gb|ACD30267.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica FSC147] Length = 209 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 110/204 (53%), Gaps = 8/204 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D E + Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + +L + Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I LD+ +GL+R Q + D E+ + K R++F D+ ++ Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQ------KVGSPDRIEKAGLEFFNKTRKVFKDLVKDS 178 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 + I D+A S Q V I I+ Sbjct: 179 DNAIEI-DAAKSIQEVEKQIYLIL 201 >gi|152979524|ref|YP_001345153.1| thymidylate kinase [Actinobacillus succinogenes 130Z] gi|254808270|sp|A6VQH1|KTHY_ACTSZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150841247|gb|ABR75218.1| dTMP kinase [Actinobacillus succinogenes 130Z] Length = 210 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 115/214 (53%), Gaps = 12/214 (5%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGKTT + +++++ D+ TREPGGTP AE R ++ + Sbjct: 2 KGKFIVLEGLEGAGKTTALHTVVEQLRSLGITDLVFTREPGGTPLAEKLRQLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PAL GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALAAGKWVIGDRHDLSSQAYQGGGRGLDRHFMQTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + PD T+ LD+ GL R + R L E A LD+F R R +L+ Sbjct: 122 DSVLGGFEPDFTLYLDIEPAEGLARARGRGELDRIEQAGLDFFNRT--------RTRYLE 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + R+ P + ++++ + + V +I + V + V+ Sbjct: 174 LVRDNP-KAVVINARQNIERVTADIQSAVKKFVE 206 >gi|315094240|gb|EFT66216.1| thymidylate kinase [Propionibacterium acnes HL060PA1] Length = 214 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 9/202 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT + LL ++L + +TREPG + + R ++LS Sbjct: 12 GGVFVVFEGGDGAGKTTQVRLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P R ++++ S + ++ I Sbjct: 183 AHPQRYLVLNARKSRKEISEAI 204 >gi|194289604|ref|YP_002005511.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424] gi|254808286|sp|B3R181|KTHY_CUPTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|193223439|emb|CAQ69444.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424] Length = 203 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 105/207 (50%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEGI+GAGK+THI + L+ + V TREPGGT E R +LL + Sbjct: 3 GKFITFEGIDGAGKSTHIDWVADRLRARADIAGVVTTREPGGTSLGEDLRQILLHR---K 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ AAR +H+ VI PAL GK ++ DRF D+++AYQG L+ L+ Sbjct: 60 MHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVLE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T++ D+P++ R L + D FE + ++ R +L A Sbjct: 120 NWVQGSLQPDLTLLFDVPLETASAR------LAAARTPDKFEAESRAFFQRTRDEYLRRA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P R ++D+ S + + I+ Sbjct: 174 AQSPHRFRVIDATRSIADIRDELEKIL 200 >gi|34581335|ref|ZP_00142815.1| thymidylate kinase [Rickettsia sibirica 246] gi|28262720|gb|EAA26224.1| thymidylate kinase [Rickettsia sibirica 246] Length = 203 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMVRKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDIEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA 194 + P+R + ++ Sbjct: 175 SNRFPERIKTIKAS 188 >gi|56707291|ref|YP_169187.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669761|ref|YP_666318.1| thymidylate kinase [Francisella tularensis subsp. tularensis FSC198] gi|134301328|ref|YP_001121296.1| thymidylate kinase [Francisella tularensis subsp. tularensis WY96-3418] gi|224456356|ref|ZP_03664829.1| thymidylate kinase [Francisella tularensis subsp. tularensis MA00-2987] gi|254369973|ref|ZP_04985981.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874129|ref|ZP_05246839.1| thymidylate kinase [Francisella tularensis subsp. tularensis MA00-2987] gi|73920819|sp|Q5NIF5|KTHY_FRATT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122971099|sp|Q14JV8|KTHY_FRAT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221744|sp|A4IW74|KTHY_FRATW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56603783|emb|CAG44750.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320094|emb|CAL08133.1| thymidylate kinase [Francisella tularensis subsp. tularensis FSC198] gi|134049105|gb|ABO46176.1| thymidylate kinase [Francisella tularensis subsp. tularensis WY96-3418] gi|151568219|gb|EDN33873.1| hypothetical protein FTBG_01572 [Francisella tularensis subsp. tularensis FSC033] gi|254840128|gb|EET18564.1| thymidylate kinase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158410|gb|ADA77801.1| thymidylate kinase [Francisella tularensis subsp. tularensis NE061598] Length = 209 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D E + Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + +L + Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ +GL+R Q S E A L++F R R++F D+ + Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + + I D+A S Q V I I+ Sbjct: 177 DSDNAIEI-DAAKSIQEVEKQIYLIL 201 >gi|157964834|ref|YP_001499658.1| thymidylate kinase [Rickettsia massiliae MTU5] gi|166987707|sp|A8F2H5|KTHY_RICM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157844610|gb|ABV85111.1| Thymidylate kinase [Rickettsia massiliae MTU5] Length = 203 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAIAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMSNKFDIRGIDFYKKIYDCFKEL 174 Query: 181 ARNQPDRCHIVDSA 194 + P+R + ++ Sbjct: 175 SNRFPERIKTIKAS 188 >gi|153000971|ref|YP_001366652.1| thymidylate kinase [Shewanella baltica OS185] gi|160875684|ref|YP_001555000.1| thymidylate kinase [Shewanella baltica OS195] gi|217973069|ref|YP_002357820.1| thymidylate kinase [Shewanella baltica OS223] gi|304409049|ref|ZP_07390670.1| thymidylate kinase [Shewanella baltica OS183] gi|307303052|ref|ZP_07582807.1| thymidylate kinase [Shewanella baltica BA175] gi|151365589|gb|ABS08589.1| dTMP kinase [Shewanella baltica OS185] gi|160861206|gb|ABX49740.1| dTMP kinase [Shewanella baltica OS195] gi|217498204|gb|ACK46397.1| dTMP kinase [Shewanella baltica OS223] gi|304352870|gb|EFM17267.1| thymidylate kinase [Shewanella baltica OS183] gi|306913412|gb|EFN43834.1| thymidylate kinase [Shewanella baltica BA175] gi|315267873|gb|ADT94726.1| thymidylate kinase [Shewanella baltica OS678] Length = 208 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 14/207 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63 FI EG+EGAGK++ I+L++ F+++ + TREPGGTP AE R ++ ++ D Sbjct: 7 FIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPLC 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++ AAR V NVI+PAL +G+ +L DR SS AYQG L ++++ Sbjct: 67 DEAECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMPL-VEAVSTA 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ PD T+ LDL +GL R R L E +D+FER R +L +A Sbjct: 126 TLKGFKPDLTLYLDLDPKLGLTRAAKRGELDRIEQQAIDFFERA--------RATYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ D ++D++ + V +IL ++ Sbjct: 178 -SEDDSIVVIDASQTMAEVHKDILAVL 203 >gi|149191871|ref|ZP_01870106.1| thymidylate kinase [Vibrio shilonii AK1] gi|148834306|gb|EDL51308.1| thymidylate kinase [Vibrio shilonii AK1] Length = 212 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 11/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ FI EG+EGAGK+T IS L+ L D+ TREPGGT AE R ++ Sbjct: 1 MSQAKFIVIEGLEGAGKSTAISTLRAELDAAGIQDIVNTREPGGTVLAEKMRALVKEEHE 60 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E AE ++ A+R+ VE VI+PAL +G ++ DR SS AYQG + Sbjct: 61 GEPLQDRAELLLMYASRIQLVETVIKPALAKGAWVIGDRHDMSSQAYQGGGREIDQAVMT 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+ I++ E PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 121 SLKHIAIGEFKPDFTLYLDIDPRLGLERARGR------GELDRIEKMDISFFERTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQK 214 ++A N + I+D++ + V +I V W QK Sbjct: 175 EMA-NNDESVAIIDASQKIEDVQHSIQQAVRTWLAKQK 211 >gi|153802880|ref|ZP_01957466.1| thymidylate kinase [Vibrio cholerae MZO-3] gi|124121598|gb|EAY40341.1| thymidylate kinase [Vibrio cholerae MZO-3] Length = 212 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++ LQ+ D + TREPGGT AE R ++ +E Sbjct: 5 FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + SL++ Sbjct: 65 DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L++A N Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D ++D+A S + V +I Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198 >gi|167562453|ref|ZP_02355369.1| thymidylate kinase [Burkholderia oklahomensis EO147] gi|167569636|ref|ZP_02362510.1| thymidylate kinase [Burkholderia oklahomensis C6786] Length = 206 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 107/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ L+ L + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGKSGKHVVVTREPGGTRLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A+ P R IVDS+ + + ++ Sbjct: 172 YLRRAQEAPHRFAIVDSSEPIPQIRKKLEGVL 203 >gi|77413425|ref|ZP_00789617.1| thymidylate kinase [Streptococcus agalactiae 515] gi|77160519|gb|EAO71638.1| thymidylate kinase [Streptococcus agalactiae 515] Length = 185 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 4/181 (2%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93 D+ TREPGG +E RH++L + + E +++ AAR H+ + PAL EGKI+ Sbjct: 9 DILTTREPGGVTISEEIRHIILDVKHTQMDKKTELLLYMAARRQHLVEKVLPALEEGKIV 68 Query: 94 LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 L DRF+DSS AYQG + L + + PD T+ D+P ++GL+R+Q Sbjct: 69 LMDRFIDSSVAYQGSGRGLDKSHIKWLNDYATDSHKPDLTLYFDVPSEVGLERIQKSVQ- 127 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 RE LD E+ D +H++ RQ +L++A ++P+R +D++ V +I+ + + Sbjct: 128 REVNRLD-LEQLD--MHQRVRQGYLELADSEPNRIVTIDASQQLDEVIAETFSIILDRIN 184 Query: 214 K 214 + Sbjct: 185 Q 185 >gi|307709124|ref|ZP_07645583.1| thymidylate kinase [Streptococcus mitis SK564] gi|307620070|gb|EFN99187.1| thymidylate kinase [Streptococcus mitis SK564] Length = 212 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSIGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|261866745|ref|YP_003254667.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412077|gb|ACX81448.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 209 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 9/206 (4%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T H ++ +V TREPGGTP AE RH L+ +E Sbjct: 3 GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRH-LIKHENEEP 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L SL++ Sbjct: 62 TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ +GL R + R LD E+++ + R +L++ + Sbjct: 122 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + I+D+A + V +I + V Sbjct: 176 DNP-KAVIIDAAQPVEQVRADIQSAV 200 >gi|15642018|ref|NP_231650.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590849|ref|ZP_01678174.1| thymidylate kinase [Vibrio cholerae 2740-80] gi|121728860|ref|ZP_01681870.1| thymidylate kinase [Vibrio cholerae V52] gi|147673617|ref|YP_001217543.1| thymidylate kinase [Vibrio cholerae O395] gi|153216421|ref|ZP_01950456.1| thymidylate kinase [Vibrio cholerae 1587] gi|153819691|ref|ZP_01972358.1| thymidylate kinase [Vibrio cholerae NCTC 8457] gi|153822936|ref|ZP_01975603.1| thymidylate kinase [Vibrio cholerae B33] gi|153827018|ref|ZP_01979685.1| thymidylate kinase [Vibrio cholerae MZO-2] gi|153830262|ref|ZP_01982929.1| thymidylate kinase [Vibrio cholerae 623-39] gi|227082143|ref|YP_002810694.1| thymidylate kinase [Vibrio cholerae M66-2] gi|229507895|ref|ZP_04397400.1| thymidylate kinase [Vibrio cholerae BX 330286] gi|229511870|ref|ZP_04401349.1| thymidylate kinase [Vibrio cholerae B33] gi|229519006|ref|ZP_04408449.1| thymidylate kinase [Vibrio cholerae RC9] gi|229521928|ref|ZP_04411345.1| thymidylate kinase [Vibrio cholerae TM 11079-80] gi|229524026|ref|ZP_04413431.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426] gi|229607440|ref|YP_002878088.1| thymidylate kinase [Vibrio cholerae MJ-1236] gi|254849103|ref|ZP_05238453.1| thymidylate kinase [Vibrio cholerae MO10] gi|255745235|ref|ZP_05419184.1| thymidylate kinase [Vibrio cholera CIRS 101] gi|262148995|ref|ZP_06028141.1| thymidylate kinase [Vibrio cholerae INDRE 91/1] gi|262167963|ref|ZP_06035663.1| thymidylate kinase [Vibrio cholerae RC27] gi|298497954|ref|ZP_07007761.1| thymidylate kinase [Vibrio cholerae MAK 757] gi|14285518|sp|Q9KQI2|KTHY_VIBCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|172047643|sp|A5F6P9|KTHY_VIBC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808314|sp|C3LNW7|KTHY_VIBCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|9656560|gb|AAF95164.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547300|gb|EAX57420.1| thymidylate kinase [Vibrio cholerae 2740-80] gi|121628868|gb|EAX61326.1| thymidylate kinase [Vibrio cholerae V52] gi|124114280|gb|EAY33100.1| thymidylate kinase [Vibrio cholerae 1587] gi|126509757|gb|EAZ72351.1| thymidylate kinase [Vibrio cholerae NCTC 8457] gi|126519547|gb|EAZ76770.1| thymidylate kinase [Vibrio cholerae B33] gi|146315500|gb|ABQ20039.1| thymidylate kinase [Vibrio cholerae O395] gi|148874275|gb|EDL72410.1| thymidylate kinase [Vibrio cholerae 623-39] gi|149739137|gb|EDM53426.1| thymidylate kinase [Vibrio cholerae MZO-2] gi|227010031|gb|ACP06243.1| thymidylate kinase [Vibrio cholerae M66-2] gi|227013913|gb|ACP10123.1| thymidylate kinase [Vibrio cholerae O395] gi|229337607|gb|EEO02624.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426] gi|229340853|gb|EEO05858.1| thymidylate kinase [Vibrio cholerae TM 11079-80] gi|229343695|gb|EEO08670.1| thymidylate kinase [Vibrio cholerae RC9] gi|229351835|gb|EEO16776.1| thymidylate kinase [Vibrio cholerae B33] gi|229355400|gb|EEO20321.1| thymidylate kinase [Vibrio cholerae BX 330286] gi|229370095|gb|ACQ60518.1| thymidylate kinase [Vibrio cholerae MJ-1236] gi|254844808|gb|EET23222.1| thymidylate kinase [Vibrio cholerae MO10] gi|255737065|gb|EET92461.1| thymidylate kinase [Vibrio cholera CIRS 101] gi|262023690|gb|EEY42391.1| thymidylate kinase [Vibrio cholerae RC27] gi|262031227|gb|EEY49845.1| thymidylate kinase [Vibrio cholerae INDRE 91/1] gi|297542287|gb|EFH78337.1| thymidylate kinase [Vibrio cholerae MAK 757] gi|327484551|gb|AEA78958.1| Thymidylate kinase [Vibrio cholerae LMA3894-4] Length = 212 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++ LQ+ D + TREPGGT AE R ++ +E Sbjct: 5 FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + SL++ Sbjct: 65 DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L++A N Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D ++D+A S + V +I Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198 >gi|145219852|ref|YP_001130561.1| thymidylate kinase [Prosthecochloris vibrioformis DSM 265] gi|189030836|sp|A4SF00|KTHY_PROVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145206016|gb|ABP37059.1| thymidylate kinase [Chlorobium phaeovibrioides DSM 265] Length = 215 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 4/209 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L L+ + +V REPGGT AE R +LL D Sbjct: 1 MLITFEGIDGAGKSTQIRKLAAHLRSQGQEVLTLREPGGTEVAENIRLILLESRHD-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V VIRPAL EG ++ DRF DS+ AYQG L+S+ +S Sbjct: 60 VGELLLFSASRAELVNEVIRPALKEGTTVILDRFFDSTTAYQGYGRGIDLPTLNSIIALS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + S+ ++ LD ER + + K + + I Sbjct: 120 TGGLKPDITFYLDILPEEALIRKFSEKSIPLAFDNDELDRMERSGLDFYRKVYEGYRCIM 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +PDR +++ S Q + T + + E Sbjct: 180 QEEPDRFVSINARKSIQEIHTTVTKTLKE 208 >gi|189499981|ref|YP_001959451.1| dTMP kinase [Chlorobium phaeobacteroides BS1] gi|189495422|gb|ACE03970.1| dTMP kinase [Chlorobium phaeobacteroides BS1] Length = 217 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 4/207 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T + LK++L K +V REPGGT AE R +LL D Sbjct: 1 MLITFEGIDGAGKSTQVKKLKKYLVEKGREVLTLREPGGTVVAEKIRELLLESKHD-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V+ VI P L + K+++ DRF DS+ AYQG L + +IS Sbjct: 60 MGELLLFSASRAELVQQVILPELEKSKVIILDRFFDSTTAYQGYGRGLDLNMLQKINDIS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + SL E+ +D E + +++ R+ +L +A Sbjct: 120 TFGLQPDLTFFLDISPEDALIRKFSEKSLPLAFENNEMDRMESSGLSFYQRVREGYLKLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + R + D+ S+ I+ V Sbjct: 180 IAEKKRFVLFDACADPDSIHAQIIQKV 206 >gi|254292084|ref|ZP_04962859.1| thymidylate kinase [Vibrio cholerae AM-19226] gi|150421990|gb|EDN13962.1| thymidylate kinase [Vibrio cholerae AM-19226] Length = 212 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++ LQ+ D + TREPGGT AE R ++ +E Sbjct: 5 FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + SL++ Sbjct: 65 DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L++A N Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D ++D+A S + V +I Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198 >gi|290560588|pdb|3LV8|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of A Thymidylate Kinase (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Tmp, Thymidine-5'-Diphosphate And Adp gi|297343231|pdb|3N2I|A Chain A, 2.25 Angstrom Resolution Crystal Structure Of A Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In C With Thymidine gi|297343232|pdb|3N2I|B Chain B, 2.25 Angstrom Resolution Crystal Structure Of A Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In C With Thymidine Length = 236 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++ LQ+ D + TREPGGT AE R ++ +E Sbjct: 29 FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 88 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + SL++ Sbjct: 89 DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 148 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L++A N Sbjct: 149 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 201 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D ++D+A S + V +I Sbjct: 202 SDDSVVMIDAAQSIEQVTADI 222 >gi|126174672|ref|YP_001050821.1| thymidylate kinase [Shewanella baltica OS155] gi|125997877|gb|ABN61952.1| thymidylate kinase [Shewanella baltica OS155] Length = 208 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/207 (34%), Positives = 115/207 (55%), Gaps = 14/207 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63 FI EG+EGAGK++ I+L++ F+++ + TREPGGTP AE R ++ ++ D Sbjct: 7 FIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPLC 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++ AAR V NVI+PAL +G+ +L DR SS AYQG L ++++ Sbjct: 67 DEAECLLIYAARAQLVANVIKPALAKGQWVLGDRHNLSSLAYQGGGRGLMPL-VEAVSNA 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ PD T+ LDL +GL R R L E +D+FER R +L +A Sbjct: 126 TLKGFKPDLTLYLDLDPKLGLTRAAKRGELDRIEQQAIDFFERA--------RATYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ D ++D++ + V +IL ++ Sbjct: 178 -SEDDSIVVIDASQTMAEVHKDILAVL 203 >gi|91793405|ref|YP_563056.1| thymidylate kinase [Shewanella denitrificans OS217] gi|91715407|gb|ABE55333.1| thymidylate kinase [Shewanella denitrificans OS217] Length = 215 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 113/203 (55%), Gaps = 10/203 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDE 61 G F+ EG+EGAGK++ ++L+K L ++ TREPGGTP AE R ++ ++ D Sbjct: 10 GKFVVIEGLEGAGKSSAVALVKALLTSHTGHEPVCTREPGGTPLAERIRDLVKIADPQDP 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EAE ++ AAR + NVI+PAL G+ +L DR SS AYQG L +++L Sbjct: 70 LCDEAECLLIYAARAQLIANVIKPALQRGEWVLGDRHNLSSLAYQGGGRGLMPL-VNTLS 128 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +Q PD T+ LD+ +GL R NR LD E++ + E+ R+ +L +A Sbjct: 129 QACLQGFKPDLTLYLDIEPSLGLTRAANR------GALDRIEQQALAFFERARETYLQLA 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 +Q ++D++ S ++V +I Sbjct: 183 -SQDSSILVIDASQSLEAVHHDI 204 >gi|28377570|ref|NP_784462.1| thymidylate kinase [Lactobacillus plantarum WCFS1] gi|254555748|ref|YP_003062165.1| thymidylate kinase [Lactobacillus plantarum JDM1] gi|308179722|ref|YP_003923850.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258053|sp|Q88YP6|KTHY_LACPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28270402|emb|CAD63305.1| thymidylate kinase [Lactobacillus plantarum WCFS1] gi|254044675|gb|ACT61468.1| thymidylate kinase [Lactobacillus plantarum JDM1] gi|308045213|gb|ADN97756.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 221 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M +G ++FEG +GAGKT+ ++ + LQ + D + VTREPGG +EA R ++L Sbjct: 1 MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EA+++AAAR H+ I+PAL +++LCDR++DSS AYQG + Sbjct: 61 TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + D T+ D+ +GL R+Q R++ ++ + + + H + + +L Sbjct: 121 MNQFATAGLTADLTLYFDVDAAVGLNRIQQH---RQNE-INRLDVEALSFHHRVQAAYLR 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PDR VD++ V T L I+ Sbjct: 177 LLADHPDRIKRVDASQPLDQVVTQALEIM 205 >gi|117920213|ref|YP_869405.1| thymidylate kinase [Shewanella sp. ANA-3] gi|166223117|sp|A0KW30|KTHY_SHESA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|117612545|gb|ABK47999.1| thymidylate kinase [Shewanella sp. ANA-3] Length = 209 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 14/210 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVD 60 S FI EG+EGAGK++ I+L++ F+++ V TREPGGTP AE R ++ ++ D Sbjct: 5 SAKFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSD 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+E ++ AAR V NVI+PAL EGK +L DR SS AYQG L ++++ Sbjct: 65 PLCDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMPL-VEAV 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 +++ PD T+ LDL +GL R R L E +D+FER R +L Sbjct: 124 SNATLKGFKPDLTLYLDLDPKLGLLRAAKRGELDRIEQQAIDFFERA--------RATYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A ++ +R ++D++ + V +IL ++ Sbjct: 176 KLA-SEDERIVVIDASQTMAEVHKDILAVL 204 >gi|157828901|ref|YP_001495143.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933625|ref|YP_001650414.1| thymidylate kinase [Rickettsia rickettsii str. Iowa] gi|166223112|sp|A8GTB0|KTHY_RICRS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030838|sp|B0BUU8|KTHY_RICRO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157801382|gb|ABV76635.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908712|gb|ABY73008.1| thymidylate kinase [Rickettsia rickettsii str. Iowa] Length = 203 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELFQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA 194 + P+R + ++ Sbjct: 175 SNRFPERIKTIKAS 188 >gi|208780179|ref|ZP_03247521.1| thymidylate kinase [Francisella novicida FTG] gi|208743828|gb|EDZ90130.1| thymidylate kinase [Francisella novicida FTG] Length = 209 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D E + Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + +L + Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ +GL+R Q S E A L++F R R +F D+ + Sbjct: 125 LNGCEPDLVIYLDIDPMLGLQRAQKVGSPDRIEKAGLEFFNRT--------RNVFKDLVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + + I D+A S Q V I I+ Sbjct: 177 DSDNAIEI-DAAKSIQEVEKQIYLIL 201 >gi|53723614|ref|YP_103080.1| thymidylate kinase [Burkholderia mallei ATCC 23344] gi|67640223|ref|ZP_00439038.1| dTMP kinase [Burkholderia mallei GB8 horse 4] gi|121601290|ref|YP_993235.1| thymidylate kinase [Burkholderia mallei SAVP1] gi|124386529|ref|YP_001029320.1| thymidylate kinase [Burkholderia mallei NCTC 10229] gi|126440272|ref|YP_001059316.1| thymidylate kinase [Burkholderia pseudomallei 668] gi|126448046|ref|YP_001080743.1| thymidylate kinase [Burkholderia mallei NCTC 10247] gi|166998743|ref|ZP_02264597.1| dTMP kinase [Burkholderia mallei PRL-20] gi|167719162|ref|ZP_02402398.1| thymidylate kinase [Burkholderia pseudomallei DM98] gi|254178271|ref|ZP_04884926.1| thymidylate kinase [Burkholderia mallei ATCC 10399] gi|254200026|ref|ZP_04906392.1| thymidylate kinase [Burkholderia mallei FMH] gi|254206360|ref|ZP_04912712.1| thymidylate kinase [Burkholderia mallei JHU] gi|254358225|ref|ZP_04974498.1| thymidylate kinase [Burkholderia mallei 2002721280] gi|59798166|sp|Q62JN9|KTHY_BURMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221726|sp|A3MKF7|KTHY_BURM7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221727|sp|A2SBK1|KTHY_BURM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221728|sp|A1V4T2|KTHY_BURMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221730|sp|A3NAE5|KTHY_BURP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52427037|gb|AAU47630.1| thymidylate kinase [Burkholderia mallei ATCC 23344] gi|121230100|gb|ABM52618.1| thymidylate kinase [Burkholderia mallei SAVP1] gi|124294549|gb|ABN03818.1| dTMP kinase [Burkholderia mallei NCTC 10229] gi|126219765|gb|ABN83271.1| dTMP kinase [Burkholderia pseudomallei 668] gi|126240916|gb|ABO04009.1| dTMP kinase [Burkholderia mallei NCTC 10247] gi|147749622|gb|EDK56696.1| thymidylate kinase [Burkholderia mallei FMH] gi|147753803|gb|EDK60868.1| thymidylate kinase [Burkholderia mallei JHU] gi|148027352|gb|EDK85373.1| thymidylate kinase [Burkholderia mallei 2002721280] gi|160699310|gb|EDP89280.1| thymidylate kinase [Burkholderia mallei ATCC 10399] gi|238520911|gb|EEP84367.1| dTMP kinase [Burkholderia mallei GB8 horse 4] gi|243065097|gb|EES47283.1| dTMP kinase [Burkholderia mallei PRL-20] Length = 206 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVDS+ S + + ++ Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKQLEGVL 203 >gi|300769770|ref|ZP_07079652.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300492678|gb|EFK27864.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 225 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 112/209 (53%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M +G ++FEG +GAGKT+ ++ + LQ + D + VTREPGG +EA R ++L Sbjct: 5 MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EA+++AAAR H+ I+PAL +++LCDR++DSS AYQG + Sbjct: 65 TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 124 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + D T+ D+ +GL R+Q R++ ++ + + + H + + +L Sbjct: 125 MNQFATAGLTADLTLYFDVDAAVGLNRIQQH---RQNE-INRLDVEALSFHHRVQAAYLR 180 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PDR VD++ V T L I+ Sbjct: 181 LLADHPDRIKRVDASQPLDQVVTQALEIM 209 >gi|119357439|ref|YP_912083.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266] gi|166221736|sp|A1BGY2|KTHY_CHLPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|119354788|gb|ABL65659.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266] Length = 219 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 4/192 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L+ L + + REPGGT AE R +LL E A Sbjct: 1 MLITFEGIDGAGKSTQIKKLQTVLNKAGVESVTLREPGGTEVAEKIRSILLESR-HEISA 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A R + V+ VI PAL +++ DRF DS+ AYQG L+++ S Sbjct: 60 VGELLLFSATRAELVQQVIIPALQTDAVVILDRFYDSTRAYQGYGRGIDLTILETIIAFS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 ++PD T LD+ + + R ++ SL E++ LD ER + + K R + +I Sbjct: 120 TFNLIPDVTFYLDIKPEDAMIRKNSKKSLPLAFENSDLDRMERSGLEFYSKVRNGYFEII 179 Query: 182 RNQPDRCHIVDS 193 R++ R ++++ Sbjct: 180 RSEQHRFKVLNA 191 >gi|76788910|ref|YP_327996.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13] gi|237802612|ref|YP_002887806.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT] gi|237804534|ref|YP_002888688.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT] gi|255310988|ref|ZP_05353558.1| thymidylate kinase [Chlamydia trachomatis 6276] gi|255317289|ref|ZP_05358535.1| thymidylate kinase [Chlamydia trachomatis 6276s] gi|123607082|sp|Q3KMH4|KTHY_CHLTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|76167440|gb|AAX50448.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13] gi|231272834|emb|CAX09743.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273846|emb|CAX10636.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT] gi|296435703|gb|ADH17877.1| thymidylate kinase [Chlamydia trachomatis G/9768] gi|296436627|gb|ADH18797.1| thymidylate kinase [Chlamydia trachomatis G/11222] gi|296437563|gb|ADH19724.1| thymidylate kinase [Chlamydia trachomatis G/11074] gi|297140062|gb|ADH96820.1| thymidylate kinase [Chlamydia trachomatis G/9301] Length = 203 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 100/191 (52%), Gaps = 9/191 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT I L + L + ++ TREPGG ++ R +LL + Sbjct: 1 MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 AE ++F AAR H++ I PAL GK ++ DRF DS+ YQG F+ +L Sbjct: 60 YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + +PD T +LD+P GL R + LD FE+K + H+ R+ FL +A Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173 Query: 183 NQPDRCHIVDS 193 PDR ++D+ Sbjct: 174 KAPDRYKVLDA 184 >gi|331266594|ref|YP_004326224.1| thymidylate kinase [Streptococcus oralis Uo5] gi|326683266|emb|CBZ00884.1| thymidylate kinase [Streptococcus oralis Uo5] Length = 212 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALGAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SNREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDTTKAVLFD 206 >gi|118498162|ref|YP_899212.1| thymidylate kinase [Francisella tularensis subsp. novicida U112] gi|194324335|ref|ZP_03058108.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE] gi|254373508|ref|ZP_04988995.1| thymidylate kinase [Francisella tularensis subsp. novicida GA99-3549] gi|254374970|ref|ZP_04990450.1| thymidylate kinase [Francisella novicida GA99-3548] gi|166221743|sp|A0Q893|KTHY_FRATN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118424068|gb|ABK90458.1| thymidylate kinase [Francisella novicida U112] gi|151571233|gb|EDN36887.1| thymidylate kinase [Francisella novicida GA99-3549] gi|151572688|gb|EDN38342.1| thymidylate kinase [Francisella novicida GA99-3548] gi|194321400|gb|EDX18885.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE] Length = 209 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D E + Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + +L + Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ +GL+R Q S E A L++F R R +F D+ + Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RNVFKDLVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + + I D+A S Q V I I+ Sbjct: 177 DSDNAIEI-DAAKSIQEVEKQIYLIL 201 >gi|295096208|emb|CBK85298.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 213 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVDTLTSLGVADMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL EGK ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAEGKWVIGDRHDLSTQAYQGGGRGIDQAMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A Q +D+ S + V +I V + +Q++ Sbjct: 177 LA-GQDKTIRTIDATQSLEDVTRDIQQTVTQWLQEQ 211 >gi|113970001|ref|YP_733794.1| thymidylate kinase [Shewanella sp. MR-4] gi|114047236|ref|YP_737786.1| thymidylate kinase [Shewanella sp. MR-7] gi|123325106|sp|Q0HJN0|KTHY_SHESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123326608|sp|Q0HVX6|KTHY_SHESR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|113884685|gb|ABI38737.1| thymidylate kinase [Shewanella sp. MR-4] gi|113888678|gb|ABI42729.1| thymidylate kinase [Shewanella sp. MR-7] Length = 209 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 118/210 (56%), Gaps = 14/210 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVD 60 S FI EG+EGAGK++ I+L++ F+++ V TREPGGTP AE R ++ ++ D Sbjct: 5 SAKFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSD 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+E ++ AAR V NVI+PAL EGK +L DR SS AYQG L ++++ Sbjct: 65 PLCDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMPL-VEAV 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 +++ PD T+ LDL +GL+R R L E +D+FER R +L Sbjct: 124 SNATLKGFKPDLTLYLDLDPKLGLQRAAKRGELDRIEQQAIDFFERA--------RATYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A ++ ++ ++D++ + V +IL ++ Sbjct: 176 KLA-SEDEQIVVIDASQTMAEVHKDILAVL 204 >gi|218709023|ref|YP_002416644.1| thymidylate kinase [Vibrio splendidus LGP32] gi|218322042|emb|CAV18087.1| Thymidylate kinase [Vibrio splendidus LGP32] Length = 210 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 17/210 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ D+ TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLV----K 56 Query: 60 DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +E E E ++ AAR+ VENVI+PAL GK +L DR SS AYQG Sbjct: 57 EEHEGEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++SL+ ++ PD T+ LDL +GL+R + R LD E+ D+ ++ R Sbjct: 117 STMESLKATTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + +L+IA Q D ++++ + VA +I Sbjct: 171 ERYLEIA-GQDDSVLVINAQQEIEQVAADI 199 >gi|238651001|ref|YP_002916857.1| thymidylate kinase [Rickettsia peacockii str. Rustic] gi|259494280|sp|C4K2K8|KTHY_RICPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238625099|gb|ACR47805.1| thymidylate kinase [Rickettsia peacockii str. Rustic] Length = 203 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + + +MPD T +D+ D +KRV +R Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR 150 >gi|307706440|ref|ZP_07643249.1| thymidylate kinase [Streptococcus mitis SK321] gi|307618150|gb|EFN97308.1| thymidylate kinase [Streptococcus mitis SK321] Length = 212 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L+ Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVVVLRTREPGGVLIGEKIREVILNPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + R +D++ + V ++++ Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFD 206 >gi|294141343|ref|YP_003557321.1| thymidylate kinase [Shewanella violacea DSS12] gi|293327812|dbj|BAJ02543.1| thymidylate kinase [Shewanella violacea DSS12] Length = 210 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 14/211 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGV 59 N FI EG+EGAGK++ ISL+ F+++ V V TREPGGTP AE R ++ ++ Sbjct: 5 NKSKFIVIEGLEGAGKSSAISLVGDFIEKHTGLVPVCTREPGGTPLAERMRDLIKIADET 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++ AAR V NVI+PAL G +L DR SS AYQG L + Sbjct: 65 DPLCDEAECLLLYAARAQLVANVIKPALNRGAWVLGDRHNLSSLAYQGGGRGLMPL-VQV 123 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIF 177 L + ++ + PD T+ LD+ GL+R R L E LD+FER R F Sbjct: 124 LSKATLGDFKPDLTLYLDIDPAQGLQRAAKRGELDRIEKQALDFFERA--------RATF 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L A+ + D ++D+ + V +IL ++ Sbjct: 176 LSFAK-EDDTIAVIDAGQTMAEVHKDILALL 205 >gi|89256933|ref|YP_514295.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS] gi|156503123|ref|YP_001429188.1| thymidylate kinase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009997|ref|ZP_02274928.1| thymidylate kinase [Francisella tularensis subsp. holarctica FSC200] gi|254368198|ref|ZP_04984218.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257] gi|254369798|ref|ZP_04985808.1| thymidylate kinase [Francisella tularensis subsp. holarctica FSC022] gi|290953993|ref|ZP_06558614.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1] gi|295312612|ref|ZP_06803364.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1] gi|122500313|sp|Q2A1V7|KTHY_FRATH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221742|sp|A7NE29|KTHY_FRATF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|89144764|emb|CAJ80099.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS] gi|134254008|gb|EBA53102.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257] gi|156253726|gb|ABU62232.1| thymidylate kinase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122757|gb|EDO66886.1| thymidylate kinase [Francisella tularensis subsp. holarctica FSC022] Length = 209 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D E + Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + +L + Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ +GL+R Q S E A L++F R R++F D+ + Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + + I D+A S Q V I I+ Sbjct: 177 DLDNAIEI-DAAKSIQEVEKQIYLIL 201 >gi|53719072|ref|YP_108058.1| thymidylate kinase [Burkholderia pseudomallei K96243] gi|76810598|ref|YP_333838.1| thymidylate kinase [Burkholderia pseudomallei 1710b] gi|126454444|ref|YP_001066584.1| thymidylate kinase [Burkholderia pseudomallei 1106a] gi|167845304|ref|ZP_02470812.1| thymidylate kinase [Burkholderia pseudomallei B7210] gi|242317737|ref|ZP_04816753.1| dTMP kinase [Burkholderia pseudomallei 1106b] gi|254189148|ref|ZP_04895659.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237] gi|254197999|ref|ZP_04904421.1| thymidylate kinase [Burkholderia pseudomallei S13] gi|254260912|ref|ZP_04951966.1| dTMP kinase [Burkholderia pseudomallei 1710a] gi|59798178|sp|Q63V08|KTHY_BURPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123598846|sp|Q3JRG5|KTHY_BURP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221729|sp|A3NW63|KTHY_BURP0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52209486|emb|CAH35438.1| putative thymidylate kinase [Burkholderia pseudomallei K96243] gi|76580051|gb|ABA49526.1| thymidylate kinase [Burkholderia pseudomallei 1710b] gi|126228086|gb|ABN91626.1| thymidylate kinase [Burkholderia pseudomallei 1106a] gi|157936827|gb|EDO92497.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237] gi|169654740|gb|EDS87433.1| thymidylate kinase [Burkholderia pseudomallei S13] gi|242140976|gb|EES27378.1| dTMP kinase [Burkholderia pseudomallei 1106b] gi|254219601|gb|EET08985.1| dTMP kinase [Burkholderia pseudomallei 1710a] Length = 206 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVDS+ S + + ++ Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRRQLEGVL 203 >gi|134277826|ref|ZP_01764541.1| thymidylate kinase [Burkholderia pseudomallei 305] gi|167823760|ref|ZP_02455231.1| thymidylate kinase [Burkholderia pseudomallei 9] gi|217421693|ref|ZP_03453197.1| dTMP kinase [Burkholderia pseudomallei 576] gi|226197216|ref|ZP_03792793.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9] gi|237812640|ref|YP_002897091.1| dTMP kinase [Burkholderia pseudomallei MSHR346] gi|134251476|gb|EBA51555.1| thymidylate kinase [Burkholderia pseudomallei 305] gi|217395435|gb|EEC35453.1| dTMP kinase [Burkholderia pseudomallei 576] gi|225930595|gb|EEH26605.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9] gi|237504430|gb|ACQ96748.1| dTMP kinase [Burkholderia pseudomallei MSHR346] Length = 206 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 15/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + R R +A + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR-------RGAARMPDKFESESDAFFARTRA 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVDS+ S + + ++ Sbjct: 171 EYLRRAHEAPHRFAIVDSSESIPQIRKQLEGVL 203 >gi|32477522|ref|NP_870516.1| thymidylate kinase [Rhodopirellula baltica SH 1] gi|46576444|sp|Q7UIM1|KTHY_RHOBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|32448076|emb|CAD77593.1| thymidylate kinase [Rhodopirellula baltica SH 1] Length = 245 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 110/207 (53%), Gaps = 15/207 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ +GI+G GK++ I +L L+ + +V R+PG T R +LL + E Sbjct: 48 GRLITLDGIDGVGKSSQIEILAERLRSEGRNVLCVRDPGSTDLGTKLRAMLLDSDL-EMH 106 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSL 120 EA++F A+R + +E+ +R AL +G ++ DRFL ++ YQ GE D+ Q L+ L Sbjct: 107 RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDA-QTLW--QL 163 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD T++LDLP +I ++RV ES +DY K RQ FLD Sbjct: 164 GRLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYM--------AKVRQAFLDE 215 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 N R H++D++ + + VA I I Sbjct: 216 LPNAGGRTHVIDASGTIEEVAETIAAI 242 >gi|28493662|ref|NP_787823.1| thymidylate kinase [Tropheryma whipplei str. Twist] gi|28572855|ref|NP_789635.1| nucleotide kinase [Tropheryma whipplei TW08/27] gi|46576523|sp|Q83FM3|KTHY_TROWT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576525|sp|Q83HB8|KTHY_TROW8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28410988|emb|CAD67373.1| putative nucleotide kinase [Tropheryma whipplei TW08/27] gi|28476704|gb|AAO44792.1| thymidylate kinase [Tropheryma whipplei str. Twist] Length = 199 Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 107/201 (53%), Gaps = 15/201 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEGI+G+GKT ++ FL+ V +TREPG R +L+ +D Sbjct: 1 MFVTFEGIDGSGKTAQLTAAGEFLKASGKQVVLTREPG---TISCIRDYVLASDMD---I 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++++A R +++ + PAL GK++L DR+LDS AYQ + + L E S Sbjct: 55 RTEALLYSADRAENIAKNVIPALNAGKVVLQDRYLDSFLAYQLADNKLVETDIMRLFEFS 114 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q + PD T++ DL +R++NR D ERK + H K R I+L ++ + Sbjct: 115 SQGLRPDLTLLFDLTPACAQERLENR---------DRIERKPIDFHSKVRNIYLKLSADN 165 Query: 185 PDRCHIVDSAHSFQSVATNIL 205 DR ++D++ SF + ++ Sbjct: 166 TDRIRVIDASQSFSKIHQQVI 186 >gi|148980539|ref|ZP_01816112.1| thymidylate kinase [Vibrionales bacterium SWAT-3] gi|145961192|gb|EDK26507.1| thymidylate kinase [Vibrionales bacterium SWAT-3] Length = 210 Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 17/210 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ + V TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKASGVEELVNTREPGGTVLAEKMRSLV----K 56 Query: 60 DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +E E E ++ AAR+ VENVI+PAL GK +L DR SS AYQG Sbjct: 57 EEHEGEQLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIAR 116 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++SL+ ++ + PD T+ LDL +GL+R + R LD E+ D+ ++ R Sbjct: 117 TTMESLKATTLGDFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTR 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + +L+IA Q D ++++ + VA +I Sbjct: 171 ERYLEIA-AQDDSVLVINAEQEIEQVAADI 199 >gi|306829296|ref|ZP_07462486.1| thymidylate kinase [Streptococcus mitis ATCC 6249] gi|304428382|gb|EFM31472.1| thymidylate kinase [Streptococcus mitis ATCC 6249] Length = 212 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFD 206 >gi|322411208|gb|EFY02116.1| thymidylate kinase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 211 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 5/201 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + + L +R + ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P +IGL R+ + RE LD + V +H++ R+ +L Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAANKN-REVNRLDL---EAVDMHQRVREGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 +A+ QP+R +D++ + V Sbjct: 177 LAQEQPNRIVTIDASKPLEDV 197 >gi|251781863|ref|YP_002996165.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390492|dbj|BAH80951.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 211 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 65/201 (32%), Positives = 108/201 (53%), Gaps = 5/201 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + + L +R + ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P +IGL R+ + RE LD + V +H++ R+ +L Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAANKN-REVNRLDL---EAVDMHQRVREGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 +A+ QP+R +D++ + V Sbjct: 177 LAQEQPNRIVTIDASKPLEDV 197 >gi|189347011|ref|YP_001943540.1| dTMP kinase [Chlorobium limicola DSM 245] gi|238692153|sp|B3EDD6|KTHY_CHLL2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189341158|gb|ACD90561.1| dTMP kinase [Chlorobium limicola DSM 245] Length = 219 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 107/209 (51%), Gaps = 4/209 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L++ L + D REPGGT AE R +LL E Sbjct: 1 MLITFEGIDGAGKSTQIRKLQKLLIGAHIDSITLREPGGTEVAEKIRQILLESR-HEISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V+ VI PA+ G ++ DRF DS+ AYQG + L ++ +S Sbjct: 60 IGELLLFSASRAELVQQVILPAIDNGTTVILDRFFDSTIAYQGYGREIDQVMLQTIITLS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + SL + + LD ER + K RQ +LDI Sbjct: 120 TFSLQPDITFYLDISPENALMRKFSEKSLPIAFDESELDRMERSGLDFFRKVRQGYLDII 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 R ++D+ Q + I+ + E Sbjct: 180 HKNERRFVLLDALDDPQMIHKRIIASLKE 208 >gi|322374522|ref|ZP_08049036.1| dTMP kinase [Streptococcus sp. C300] gi|321280022|gb|EFX57061.1| dTMP kinase [Streptococcus sp. C300] Length = 212 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALKAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + +R +D++ + V Sbjct: 177 LDKEGNRIVKIDASLPLEQV 196 >gi|124262780|ref|YP_001023250.1| thymidylate kinase [Methylibium petroleiphilum PM1] gi|124262026|gb|ABM97015.1| thymidylate kinase [Methylibium petroleiphilum PM1] Length = 224 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 106/193 (54%), Gaps = 10/193 (5%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ ++GAGK+T + ++++R +V VTREPGG+P AE R ++L D Sbjct: 8 GRMITLSALDGAGKSTQVQTVVERLRDYYGIEVVVTREPGGSPVAERLRELVLHG--DVI 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++F AAR DH+ VIRPAL G+ ++CDRF+D S+AYQ ++L++ Sbjct: 66 DPVAEMMIFFAARQDHLAQVIRPALQAGRWVVCDRFVDCSWAYQVRGRGLARAEFEALEK 125 Query: 123 ISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ PD T +LD+ PV V A D FER+D+ + RQ + + Sbjct: 126 MVLRGWRPDLTFLLDIEPV------VAAARRRGRGAEADRFERQDLEFFGRVRQGYFERM 179 Query: 182 RNQPDRCHIVDSA 194 P+R ++D+A Sbjct: 180 VADPERFRVIDAA 192 >gi|327543342|gb|EGF29771.1| thymidylate kinase [Rhodopirellula baltica WH47] Length = 225 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 109/207 (52%), Gaps = 15/207 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ +GI+G GK++ I +L L+ + V R+PG T R +LL + E Sbjct: 24 GRLITLDGIDGVGKSSQIEILAERLRSEGRQVLCVRDPGSTDLGTKLRAMLLDSDL-EMH 82 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSL 120 EA++F A+R + +E+ +R AL +G ++ DRFL ++ YQ GE D+ Q L+ L Sbjct: 83 RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDA-QTLW--QL 139 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD T++LDLP +I ++RV ES +DY K RQ FLD Sbjct: 140 GRLACGGVQPDVTLLLDLPAEISMQRVGGEADRMESRGVDYM--------AKVRQAFLDE 191 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 N R H++D++ + + VA I I Sbjct: 192 LPNAGGRTHVIDASGTIEEVAETIAAI 218 >gi|254524318|ref|ZP_05136373.1| thymidylate kinase [Stenotrophomonas sp. SKA14] gi|219721909|gb|EED40434.1| thymidylate kinase [Stenotrophomonas sp. SKA14] Length = 221 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 115/215 (53%), Gaps = 16/215 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDE 61 F+S EG EGAGKTT I+ ++ L+ ++V +TREPGGTP AE R ++L + Sbjct: 11 FVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEAE ++ AAR HV VI+PAL G +L DRF DSSYAYQG ++ L+ Sbjct: 71 LSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADLE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLR-ESACLDYFERKDVMIHEKRRQIFL 178 +V + T++LD+ V +G R R + R ES D+F+R R +F Sbjct: 131 RRAVGLLP-GLTLLLDVDVAVGRARANGRDLWPDRIESEQDDFFQRV--------RAVFR 181 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ P R ++D+ + VA +++ V +Q Sbjct: 182 SRAQLDPQRFALIDAGQVQERVAADVVARVERWLQ 216 >gi|329120408|ref|ZP_08249074.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200] gi|327462092|gb|EGF08420.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200] Length = 207 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 64/188 (34%), Positives = 105/188 (55%), Gaps = 7/188 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+G+GK+TH++ ++ + + V TREPGGTP E R +LL + G Sbjct: 5 FITLDGIDGSGKSTHLAAMRDWFAARGLPVLFTREPGGTPLGEELRRLLLDPAA-QVGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+++VI PAL +G ++ DRF D+++AYQG + +L+ Sbjct: 64 TETLLMFAARQQHLDDVILPALEQGVHVVSDRFTDATFAYQGGGRGLPEADIAALEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + + PD T+ILD+P ++ RV ++ D FE++ + RQ +LD A P Sbjct: 124 RGLRPDLTLILDVPAEVSFARVA------KARDKDRFEQEQAAFFLRVRQAYLDRAAADP 177 Query: 186 DRCHIVDS 193 R ++DS Sbjct: 178 QRYRVIDS 185 >gi|306825448|ref|ZP_07458788.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432386|gb|EFM35362.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 212 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + +R +D++ + V Sbjct: 177 LDKEGNRIVKIDASLPLEEV 196 >gi|229528965|ref|ZP_04418355.1| thymidylate kinase [Vibrio cholerae 12129(1)] gi|229332739|gb|EEN98225.1| thymidylate kinase [Vibrio cholerae 12129(1)] Length = 212 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/201 (35%), Positives = 110/201 (54%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++ LQ+ D + TREPGGT AE R ++ +E Sbjct: 5 FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + SL++ Sbjct: 65 DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L++A N Sbjct: 125 ALGAFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELA-N 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D ++D+A S + V +I Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198 >gi|115315297|ref|YP_764020.1| thymidylate kinase [Francisella tularensis subsp. holarctica OSU18] gi|122324708|sp|Q0BKK1|KTHY_FRATO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|115130196|gb|ABI83383.1| dTMP kinase [Francisella tularensis subsp. holarctica OSU18] Length = 209 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 111/206 (53%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D E + Sbjct: 5 FIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + +L Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNNNF 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ +GL+R Q S E A L++F R R++F D+ + Sbjct: 125 LNGCEPDLVIYLDIDPILGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + + I D+A S Q V I I+ Sbjct: 177 DLDNAIEI-DAAKSIQEVEKQIYLIL 201 >gi|27366274|ref|NP_761802.1| thymidylate kinase [Vibrio vulnificus CMCP6] gi|37679464|ref|NP_934073.1| thymidylate kinase [Vibrio vulnificus YJ016] gi|320156783|ref|YP_004189162.1| thymidylate kinase [Vibrio vulnificus MO6-24/O] gi|31340187|sp|Q8D8H5|KTHY_VIBVU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576399|sp|Q7MLZ6|KTHY_VIBVY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|27362475|gb|AAO11329.1| thymidylate kinase [Vibrio vulnificus CMCP6] gi|37198208|dbj|BAC94044.1| thymidylate kinase [Vibrio vulnificus YJ016] gi|319932095|gb|ADV86959.1| thymidylate kinase [Vibrio vulnificus MO6-24/O] Length = 212 Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 77/222 (34%), Positives = 118/222 (53%), Gaps = 20/222 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGK+T I ++L Q ++ TREPGGTP AE R ++ Sbjct: 1 MKQAKFIVIEGLEGAGKSTAIQTVLDTLRQAGINEIAQTREPGGTPLAEKMRALV----K 56 Query: 60 DEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +E E E ++ AAR+ VENVI+PAL EGK ++ DR SS AYQG Sbjct: 57 EEHPGEHLHDMTELLLLYAARVQLVENVIKPALHEGKWVVGDRHDLSSQAYQGGGRQIDA 116 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +L++ ++ E P T+ +D+ +GL+R + R LD E+ D+ E+ R Sbjct: 117 TLMKNLRDTALGEFKPAFTLYMDIDPKVGLERARGR------GELDRIEKMDISFFERTR 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI---LNIVWELVQ 213 Q +L++A++ I ++ S + VA +I LN+ E +Q Sbjct: 171 QRYLELAKSDASIVTI-NAEQSIEQVANDIRSALNLWLEQLQ 211 >gi|270292959|ref|ZP_06199170.1| dTMP kinase [Streptococcus sp. M143] gi|270278938|gb|EFA24784.1| dTMP kinase [Streptococcus sp. M143] Length = 212 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDL---EGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + +R +D++ + V Sbjct: 177 LDKEGNRIVKIDASLPLEQV 196 >gi|282853298|ref|ZP_06262635.1| dTMP kinase [Propionibacterium acnes J139] gi|282582751|gb|EFB88131.1| dTMP kinase [Propionibacterium acnes J139] gi|314922387|gb|EFS86218.1| thymidylate kinase [Propionibacterium acnes HL001PA1] gi|314965424|gb|EFT09523.1| thymidylate kinase [Propionibacterium acnes HL082PA2] gi|314982835|gb|EFT26927.1| thymidylate kinase [Propionibacterium acnes HL110PA3] gi|315091154|gb|EFT63130.1| thymidylate kinase [Propionibacterium acnes HL110PA4] gi|315104893|gb|EFT76869.1| thymidylate kinase [Propionibacterium acnes HL050PA2] gi|327329219|gb|EGE70979.1| dTMP kinase [Propionibacterium acnes HL103PA1] Length = 214 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 110/210 (52%), Gaps = 9/210 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKI---------AAKDRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++++ S + ++ I V L+ Sbjct: 183 AHPQRYLVLNARKSRKEISEAICQRVTGLL 212 >gi|167738165|ref|ZP_02410939.1| thymidylate kinase [Burkholderia pseudomallei 14] gi|167815351|ref|ZP_02447031.1| thymidylate kinase [Burkholderia pseudomallei 91] gi|167893848|ref|ZP_02481250.1| thymidylate kinase [Burkholderia pseudomallei 7894] gi|167902298|ref|ZP_02489503.1| thymidylate kinase [Burkholderia pseudomallei NCTC 13177] gi|167910539|ref|ZP_02497630.1| thymidylate kinase [Burkholderia pseudomallei 112] gi|167918566|ref|ZP_02505657.1| thymidylate kinase [Burkholderia pseudomallei BCC215] gi|254179465|ref|ZP_04886064.1| thymidylate kinase [Burkholderia pseudomallei 1655] gi|254297346|ref|ZP_04964799.1| thymidylate kinase [Burkholderia pseudomallei 406e] gi|157807497|gb|EDO84667.1| thymidylate kinase [Burkholderia pseudomallei 406e] gi|184210005|gb|EDU07048.1| thymidylate kinase [Burkholderia pseudomallei 1655] Length = 206 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 15/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + R R +A + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR-------RGAARMPDKFESESDAFFARTRA 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R IVDS+ S + + ++ Sbjct: 171 EYLRRAHEAPHRFAIVDSSESIPQIRKRLEGVL 203 >gi|224541623|ref|ZP_03682162.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM 15897] gi|224525461|gb|EEF94566.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM 15897] Length = 211 Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 16/215 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG+GKTT +L + + Y++ +REPGG AE R V+ + A Sbjct: 10 LFITFEGGEGSGKTTIAKMLHKQFIEEGYNITFSREPGGVDIAEQIRDVITDVNNTKMDA 69 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R H+ + P L E I++CDRF+DSS YQG + + +D++ ++ Sbjct: 70 RTEALLYAASRRQHLVEKVLPVLKEDGIVICDRFIDSSLVYQG---IGRGIGVDNIYNMN 126 Query: 125 V---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++PD TI D+ ++ LKR+ RE LD E D H K + + I Sbjct: 127 LFATDGILPDLTIFFDVKPEVALKRITGD---REVNRLD-LESLD--FHHKVYEGYQMIC 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PDR VD++ + V V+E+V+ R+ Sbjct: 181 DKFPDRIVKVDASLPVEEVYRQ----VYEIVKDRL 211 >gi|86742981|ref|YP_483381.1| thymidylate kinase [Frankia sp. CcI3] gi|86569843|gb|ABD13652.1| thymidylate kinase [Frankia sp. CcI3] Length = 730 Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 104/209 (49%), Gaps = 9/209 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EGI+GAGK+T + LL+ +L +V VT E GGT R +LL V Sbjct: 505 GLFIAIEGIDGAGKSTQVELLRTWLASSGREVVVTSESGGTALGTGLRELLLDPTV-RLH 563 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++ AA R +HV VI PAL G I++ DR++DS A+Q + L L + Sbjct: 564 PRTEALLTAADRAEHVAQVIEPALARGAIVITDRYVDSFIAFQSVSQALSTDELSVLTQW 623 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ--------NRYSLRESACLDYFERKDVMIHEKRRQ 175 + ++PD T++LDLP +I L+R + + + + + R Sbjct: 624 ATHALLPDVTVLLDLPAEIVLRRARMTAYPDPPPGPPGPPDGPAEADDAGKLTFQGRVRD 683 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204 F +A+ +PDR +D+ S + + I Sbjct: 684 TFRRLAQKEPDRYLPLDATRSPEEIHAEI 712 >gi|15892970|ref|NP_360684.1| thymidylate kinase [Rickettsia conorii str. Malish 7] gi|23821795|sp|Q92GS5|KTHY_RICCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|15620166|gb|AAL03585.1| thymidylate kinase [Rickettsia conorii str. Malish 7] Length = 203 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF++S+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIESTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR------NMNNKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA 194 + P+R + ++ Sbjct: 175 SNRFPERIKTIKAS 188 >gi|313672881|ref|YP_004050992.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672] gi|312939637|gb|ADR18829.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672] Length = 214 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 114/212 (53%), Gaps = 8/212 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + +GI+G GKTT I LL +L N +VT+EPGGT R +L+S Sbjct: 4 FYAAIDGIDGCGKTTQIKLLSDYLAGLNIPFYVTKEPGGTDVGGILRKILISKDY-HVEP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++++A RL+H + V+ P + +G ++ DRF+ S+YAYQ LD L+ IS Sbjct: 63 ETELLLYSADRLEHQKKVVIPNMHKGYSVISDRFISSTYAYQVFGRGLDRSLLDFLRNIS 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD---YFERKDVMIHEKRRQIFLDIA 181 V + PD TII+D+ + L+R +NR L++ ++ FE ++ + K R FL A Sbjct: 123 VS-IYPDLTIIIDIEPSVALERAKNR--LKKHGLMEKEGKFESLNIDFYAKVRDGFLWYA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 N + ++D S +S+ +I N + E + Sbjct: 180 DNFSNVV-VLDGNKSIESLFGDIKNRINEFIN 210 >gi|241895200|ref|ZP_04782496.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313] gi|241871506|gb|EER75257.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313] Length = 214 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 118/211 (55%), Gaps = 21/211 (9%) Query: 3 SGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGV 59 SG FI+FEG +GAGKT+ + ++++R + +TREPGG + AEA R V+L + Sbjct: 2 SGTFITFEGPDGAGKTSVLRAIVERLAPLLGDKLVLTREPGGKDSQVAEAIRDVVLDPNL 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AA+R H+ + + PAL K+++ DR++DSS AYQG + L +++ Sbjct: 62 PSMDAWTEALLYAASRRQHLVDTVLPALAADKVVVSDRYVDSSIAYQG---GGRRLGIEA 118 Query: 120 LQEI---SVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDV---MIHEK 172 + EI + + +MP TI LD+ ++GL+R+Q NR D R DV H++ Sbjct: 119 VTEINQFATKGIMPTATIYLDIRPEVGLQRIQENRQ--------DEINRLDVEKLSFHQR 170 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 + +A P+R I+++ V T+ Sbjct: 171 VTDAYHQLATQYPERFLIINAEQDLADVITD 201 >gi|189219648|ref|YP_001940289.1| Thymidylate kinase [Methylacidiphilum infernorum V4] gi|189186506|gb|ACD83691.1| Thymidylate kinase [Methylacidiphilum infernorum V4] Length = 225 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 11/210 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEG EG GKTT I LLK+ L+ V + REPG T E R +L + + Sbjct: 20 FISFEGSEGCGKTTQIRLLKKRLEDHGQKVVIVREPGTTKLGEKLRRILKHSSLSLYPL- 78 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +F A+R++ + VI P + + +L DRF+DS+ YQG ++ L E++ Sbjct: 79 TELFLFEASRVELTKRVIEPEMAKNSWILADRFVDSTLVYQGIIRGIPLKTIEELNELAS 138 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARN 183 + P TI+LD+P R++ R + D FE+ E+ RQ +L++A+ Sbjct: 139 SGIKPTLTILLDIPHQCSRSRIKKRDHKKTITDRLQDEFEKS----LEQIRQAYLELAQR 194 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +IV S Q ++ ++WE V+ Sbjct: 195 EPHRFYIVKGTDSPQFISA----LIWEKVE 220 >gi|326562040|gb|EGE12369.1| thymidylate kinase [Moraxella catarrhalis 46P47B1] gi|326564967|gb|EGE15168.1| thymidylate kinase [Moraxella catarrhalis 12P80B1] gi|326573572|gb|EGE23534.1| thymidylate kinase [Moraxella catarrhalis CO72] Length = 206 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 10/204 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEG EG GKTT I L L + V TREPGG+ AE R + L+ + Sbjct: 3 GKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNTN-MN 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 A+ E ++ AAR DH+ VI PA+ GK ++ DRF DS+ AYQG R + L ++ Sbjct: 62 ADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIEL 121 Query: 123 ISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q + PD T+ LDL V +G++R R + D E D+ E+ Q Sbjct: 122 LIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAYQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 +R H +D+ + VA I Sbjct: 176 HSQHSNRIHRIDANGTVAEVAARI 199 >gi|317047712|ref|YP_004115360.1| thymidylate kinase [Pantoea sp. At-9b] gi|316949329|gb|ADU68804.1| thymidylate kinase [Pantoea sp. At-9b] Length = 211 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 11/202 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT + L+ + D V TREPGGTP AE R VL+ G++ + Sbjct: 5 FIVIEGLEGAGKTTARDAVVEVLREQGIDDLVFTREPGGTPLAEQLR-VLVKQGIEGEQV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 TDKAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDTQLMTTLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PDCT+ LD+ +IGL+R + R LD E++ + E+ R+ +L +A Sbjct: 124 AVLGAFRPDCTLYLDVTPEIGLQRARARGE------LDRIEQESLRFFERTRERYLALAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P I D+ + V +I Sbjct: 178 ADPSIITI-DATQTLPEVTASI 198 >gi|188026129|ref|ZP_02960979.2| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827] gi|188021733|gb|EDU59773.1| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827] Length = 212 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 6/164 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV--DEF 62 +I EG+EGAGKTT I + L + D+ TREPGGTP AE R L+ G+ ++ Sbjct: 9 YIVIEGLEGAGKTTAIKTVVETLNQAGIQDIAFTREPGGTPLAEKLRE-LIKQGISGEKV 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL GK ++ DR SS AYQG + SL++ Sbjct: 68 TDKAELLMLYAARVQLVENVIKPALAAGKWVVGDRHDLSSQAYQGGGRGIDRQLMQSLRD 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 + + E P T+ LDLP +GL+R + R L E L +FER Sbjct: 128 LVLGEFKPALTLYLDLPPALGLQRARARGELDRIEQESLAFFER 171 >gi|239815834|ref|YP_002944744.1| thymidylate kinase [Variovorax paradoxus S110] gi|239802411|gb|ACS19478.1| thymidylate kinase [Variovorax paradoxus S110] Length = 220 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 10/156 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLF++ EGI+GAGK++H+ ++ + + V TREPGGTP AE R ++L +D Sbjct: 1 MSEGLFLTLEGIDGAGKSSHLDAMEALFKARGRTVVRTREPGGTPLAETLRGLVLEQAMD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+++ AAR DH+ VI PAL G ++LCDRF D+++AYQG L +L Sbjct: 61 PL---TESLLVFAARRDHIVQVIEPALARGDVVLCDRFTDATFAYQGAGRDFDTQLLSTL 117 Query: 121 QE-------ISVQEVMPDCTIILDLPVDIGLKRVQN 149 ++ + Q + P T+ DL +I +R+ Sbjct: 118 EQWVQGGRGAAGQLLQPHITLWFDLAPEIAAERLAG 153 >gi|167836304|ref|ZP_02463187.1| thymidylate kinase [Burkholderia thailandensis MSMB43] Length = 206 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 15/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQEKLGPAGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 QPMD---LETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQ 175 L++L+ PD T++ D+ + R R +A + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR-------RGAARMPDKFESESDAFFARTRA 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A+ P R IVDS+ + + ++ Sbjct: 171 EYLRRAQEAPHRFVIVDSSEPIPQIRKQLEGVL 203 >gi|15604908|ref|NP_219692.1| thymidylate kinase [Chlamydia trachomatis D/UW-3/CX] gi|8134523|sp|O84191|KTHY_CHLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|3328593|gb|AAC67780.1| Thymidylate Kinase [Chlamydia trachomatis D/UW-3/CX] gi|297748318|gb|ADI50864.1| Thymidylate kinase [Chlamydia trachomatis D-EC] gi|297749198|gb|ADI51876.1| Thymidylate kinase [Chlamydia trachomatis D-LC] Length = 203 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 68/191 (35%), Positives = 99/191 (51%), Gaps = 9/191 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT I L + L + ++ TREPGG ++ R +LL + Sbjct: 1 MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 AE ++F AAR H++ I PAL GK ++ DRF DS+ YQG F+ +L Sbjct: 60 YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + +PD T +LD+P GL R + LD FE+K + H R+ FL +A Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHRSVREGFLALAE 173 Query: 183 NQPDRCHIVDS 193 PDR ++D+ Sbjct: 174 KAPDRYKVLDA 184 >gi|296112464|ref|YP_003626402.1| thymidylate kinase [Moraxella catarrhalis RH4] gi|295920158|gb|ADG60509.1| thymidylate kinase [Moraxella catarrhalis RH4] gi|326561596|gb|EGE11935.1| thymidylate kinase [Moraxella catarrhalis 7169] gi|326565335|gb|EGE15514.1| thymidylate kinase [Moraxella catarrhalis 103P14B1] gi|326568044|gb|EGE18134.1| thymidylate kinase [Moraxella catarrhalis BC7] gi|326570576|gb|EGE20614.1| thymidylate kinase [Moraxella catarrhalis BC1] gi|326570735|gb|EGE20761.1| thymidylate kinase [Moraxella catarrhalis BC8] gi|326577357|gb|EGE27243.1| thymidylate kinase [Moraxella catarrhalis 101P30B1] gi|326577843|gb|EGE27710.1| thymidylate kinase [Moraxella catarrhalis O35E] Length = 206 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 10/204 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEG EG GKTT I L L + V TREPGG+ AE R + L+ + Sbjct: 3 GKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNAN-MN 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 A+ E ++ AAR DH+ VI PA+ GK ++ DRF DS+ AYQG R + L ++ Sbjct: 62 ADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIEL 121 Query: 123 ISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q + PD T+ LDL V +G++R R + D E D+ E+ Q Sbjct: 122 LIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAYQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 +R H +D+ + VA I Sbjct: 176 HSQHSNRIHRIDANGTVAEVAARI 199 >gi|15604527|ref|NP_221045.1| thymidylate kinase [Rickettsia prowazekii str. Madrid E] gi|6225595|sp|Q9ZCN9|KTHY_RICPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|3861221|emb|CAA15121.1| THYMIDYLATE KINASE (tmk) [Rickettsia prowazekii] gi|292572315|gb|ADE30230.1| Thymidylate kinase [Rickettsia prowazekii Rp22] Length = 203 Score = 108 bits (270), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 62/195 (31%), Positives = 105/195 (53%), Gaps = 9/195 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG++G GK+T +L +L+ + V +TRE GGT AE R +L++ + Sbjct: 4 LTQGKFITFEGVDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTTVAEKMREILVN---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL +G I++CDRF+DS+ YQG + + SL Sbjct: 61 ELLPMSELLQAMAARYDHMARKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLVYSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ +KRV R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPHTAIKRVNAR------NMSNKFDIRSIDFYKKIYTCFKEL 174 Query: 181 ARNQPDRCHIVDSAH 195 + P+R + ++H Sbjct: 175 SNRFPERIKTIKASH 189 >gi|322833645|ref|YP_004213672.1| thymidylate kinase [Rahnella sp. Y9602] gi|321168846|gb|ADW74545.1| thymidylate kinase [Rahnella sp. Y9602] Length = 216 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 75/202 (37%), Positives = 107/202 (52%), Gaps = 11/202 (5%) Query: 6 FISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT H ++ Q ++ TREPGGTP AE R L GVD + Sbjct: 5 FIVIEGLEGAGKTTAHDVVVNALRQHGVGEIVFTREPGGTPLAEKLRD-LFKRGVDGEKP 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VE VI PAL G ++ DR SS AYQG + SL++ Sbjct: 64 TVKAEVLMLYAARVQLVETVILPALARGAWVVGDRHDLSSQAYQGGGRGIDAKLMTSLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LDLP IGL+R + R LD E++ + E+ R +L++A Sbjct: 124 TVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQEALPFFERTRTRYLELAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 R +D++ S + V +I Sbjct: 178 GD-SRIKTIDASQSIEQVTASI 198 >gi|307131529|ref|YP_003883545.1| thymidylate kinase [Dickeya dadantii 3937] gi|306529058|gb|ADM98988.1| thymidylate kinase [Dickeya dadantii 3937] Length = 217 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 70/168 (41%), Positives = 96/168 (57%), Gaps = 5/168 (2%) Query: 1 MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKT+ H +++ D+ TREPGGTP AE R ++ Sbjct: 1 MNSK-FIVIEGLEGAGKTSAHAVVVETLRTFGIDDIVFTREPGGTPLAEKLRELIKQGVA 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ VENVIRPAL G ++ DR SS AYQG + Sbjct: 60 DEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDEQLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 SL++ + + PD T+ LD+P ++GLKR + R +L E L +FER Sbjct: 120 SLRDTVLGDFRPDLTLYLDIPPELGLKRARQRGALDRIELESLAFFER 167 >gi|227499766|ref|ZP_03929866.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098] gi|227218152|gb|EEI83418.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098] Length = 209 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 111/215 (51%), Gaps = 12/215 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG +G+GKTT +S +K+ L++ + REPGGT +E R +++ Sbjct: 3 GKLIVFEGPDGSGKTTVLSEVKKRLEKDKIEFLDYREPGGTYISEKIRDIIIDKDNIAMT 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E ++FAA+R VE I+PAL G ++LCDRF+ SS YQG + L +D ++EI Sbjct: 63 ASCECLLFAASRAQLVEEKIKPALESGMLVLCDRFVLSSLLYQG---VGRGLGIDKVKEI 119 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + D TI D+ L R RE+ D E +D H+K +LDI Sbjct: 120 NDFATAGLRADLTIFFDIDYKTALIRK------RENFSADRLESEDFDFHKKIFNAYLDI 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A +D++ S V ++ +++E ++++ Sbjct: 174 AERYKKEIKKIDASKSVTEVTDQVMKLIYESLEEK 208 >gi|253989189|ref|YP_003040545.1| thymidylate kinase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780639|emb|CAQ83801.1| thymidylate kinase [Photorhabdus asymbiotica] Length = 212 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 78/219 (35%), Positives = 113/219 (51%), Gaps = 14/219 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKT+ + + L++ D+ TREPGGTP AE R ++ Sbjct: 1 MNSK-FIVIEGLEGAGKTSAMKTVVELLKQHGIQDLVFTREPGGTPLAEKLRELIKQGIE 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 DEPLTDKAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDKNLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176 SL+ + PD TI LDLP IGL R R L E +D+F+R R Sbjct: 120 SLRNTVLGSFRPDLTIYLDLPPQIGLLRACQRGELDRIEKESMDFFDRT--------RSC 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L+ A +Q VD++ V +I ++ + ++++ Sbjct: 172 YLEFA-SQDKSIVTVDASQPIDRVQADICQVLEQWLKQQ 209 >gi|116626370|ref|YP_828526.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076] gi|116229532|gb|ABJ88241.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076] Length = 224 Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 1/205 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG++G+GKTT + L L+ V T EPGG P A+ R ++L E Sbjct: 17 GIFITFEGMDGSGKTTQMHRLAERLRGMGRTVLETAEPGGPPIAQKIRRIVLDAANQELS 76 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ A+R +V+ I+PAL G+I+L DRF DSS YQG + +L I Sbjct: 77 PTAEILLYFASRAQNVDQWIQPALARGEIVLADRFTDSSLVYQGIGRGLGADTVVALDRI 136 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + PD TI++D+ + L R + R +L + C + + + H K + +A Sbjct: 137 ACRGLKPDLTILVDVDAEASLTRARAR-NLAQPHCETRMDDQALEFHLKVHAAYHALAAA 195 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R + + + I +IV Sbjct: 196 EPERVKVANGRAGMDEIEREIWSIV 220 >gi|296102884|ref|YP_003613030.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057343|gb|ADF62081.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 213 Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L+ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVIETLKTLGVADMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL GK ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E LD+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A +Q +D+ S + V +I V +Q++ Sbjct: 177 LA-SQDSSIRTIDATQSLEEVTRSIEETVKHWLQEQ 211 >gi|54308393|ref|YP_129413.1| thymidylate kinase [Photobacterium profundum SS9] gi|59798292|sp|Q6LSW5|KTHY_PHOPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46912821|emb|CAG19611.1| putative thymidylate kinase [Photobacterium profundum SS9] Length = 209 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGK+T I ++ + TREPGGTP AE R ++ DE Sbjct: 5 FIVIEGLEGAGKSTAIQQVIDALAAHGIENPESTREPGGTPLAEQMRALIKEGHPDEPLT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR+ V+N+I+PAL EG+ ++ DR SS AYQG +++L++ Sbjct: 65 DMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI +D+ +GL+R + R LD E+ +V + R FL+++ N Sbjct: 125 VLGDFCPDLTIYMDIDPILGLERARGR------GELDRIEKMNVDFFHRARARFLELSEN 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P + I+D+ S ++V +++ + ++K+ Sbjct: 179 NP-KVIIIDAGQSLENVTSDLKQALNHWLEKQ 209 >gi|270261351|ref|ZP_06189624.1| thymidylate kinase [Serratia odorifera 4Rx13] gi|270044835|gb|EFA17926.1| thymidylate kinase [Serratia odorifera 4Rx13] Length = 211 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 112/212 (52%), Gaps = 11/212 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63 F+ EG+EGAGKTT + L+ D+ TREPGGTP AE R L G+D E Sbjct: 5 FVVIEGLEGAGKTTARDTVVNVLREHGINDIVFTREPGGTPLAEKLRD-LFKRGIDGELP 63 Query: 64 A-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + SL++ Sbjct: 64 TIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMASLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LDLP +GL+R + R LD E++ + E+ R +L++A Sbjct: 124 TVLGDFRPDLTVYLDLPPLLGLQRARAR------GELDRIEQEALPFFERTRSRYLELA- 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q D VD++ S + V I + + +Q+ Sbjct: 177 AQDDSIVTVDASQSLEQVTAAIRRCLSQWLQQ 208 >gi|242239032|ref|YP_002987213.1| thymidylate kinase [Dickeya dadantii Ech703] gi|242131089|gb|ACS85391.1| thymidylate kinase [Dickeya dadantii Ech703] Length = 217 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 74/169 (43%), Positives = 96/169 (56%), Gaps = 7/169 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKT+ +++ L DV TREPGGTP AE R L+ GV Sbjct: 1 MNSK-FIVIEGLEGAGKTSARTVVVDGLAAFGIRDVVFTREPGGTPVAEKLRE-LIKQGV 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG L Sbjct: 59 DGEPLTDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDARLL 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 SL++I + + PD T+ LDLP +GL+R + R L E L +FER Sbjct: 119 SSLRDIVLGDFRPDLTLYLDLPPALGLQRARQRGELDRIEQESLTFFER 167 >gi|146311269|ref|YP_001176343.1| thymidylate kinase [Enterobacter sp. 638] gi|166987703|sp|A4W9B2|KTHY_ENT38 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145318145|gb|ABP60292.1| thymidylate kinase [Enterobacter sp. 638] Length = 213 Score = 107 bits (268), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L+ + V TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVDTLKELGIEQMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL EG+ ++ DR S+ AYQG L +L+ Sbjct: 65 IDVKAEVLMFYAARVQLVETVIKPALAEGQWVIGDRHDLSTQAYQGGGRGIDQQMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + P+ T+ LD+ ++GLKR + R L E LD+F R R +L+ Sbjct: 125 NAVLGDFRPNLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A Q D +D+ S + V +I + +Q++ Sbjct: 177 LA-AQDDSIRTIDATQSLEGVTRSIRETITAWLQEQ 211 >gi|323976529|gb|EGB71617.1| thymidylate kinase [Escherichia coli TW10509] Length = 213 Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 21/217 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALTNGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211 ++A Q H +D+ +SV T + N V EL Sbjct: 176 ELA-AQDKSIHTIDATQPLESVMDAIRTTVTNWVKEL 211 >gi|33152912|ref|NP_874265.1| thymidylate kinase [Haemophilus ducreyi 35000HP] gi|46576466|sp|Q7VKH4|KTHY_HAEDU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33149137|gb|AAP96654.1| thymidylate kinase [Haemophilus ducreyi 35000HP] Length = 214 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 12/212 (5%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGKTT H +L + Q + TREPGGTP AE R+++ + Sbjct: 8 GKFIVLEGLEGAGKTTAHQIILTQLKQAGIQQIVQTREPGGTPLAEKLRYLIKHEFEEPI 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR VENVI+PAL GK +L DR SS AYQG L+SL+E Sbjct: 68 SPQAELLMLYAARAQLVENVIKPALSAGKWVLGDRHDMSSQAYQGGGRQLDVALLNSLKE 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLDI 180 + PD TI LD+ IGL R S C LD E++ + + R+ +L + Sbjct: 128 SVLGPFEPDLTIYLDIDPAIGLARA--------SGCGELDRIEQQSLDFFYRTRERYLAL 179 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ ++ I+++ + V +I V + + Sbjct: 180 TQHN-EKAVIINAEQPLEKVTNDIQQAVQKFL 210 >gi|188534149|ref|YP_001907946.1| thymidylate kinase [Erwinia tasmaniensis Et1/99] gi|238689725|sp|B2VDK3|KTHY_ERWT9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|188029191|emb|CAO97063.1| Thymidylate kinase (dTMP kinase) [Erwinia tasmaniensis Et1/99] Length = 210 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + LQR D+ TREPGGTP AE R L+ GV Sbjct: 1 MNSK-FIVIEGLEGAGKTTAREAVVSELQRHGINDIIFTREPGGTPLAEKLRE-LIKQGV 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 EGERVTDSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDAGLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +SL++ + + PD T+ LD+ IGL+R + R LD E++ + + R+ + Sbjct: 119 NSLKQAVLGDFAPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L +A + R VD+ + V + + + +Q++ Sbjct: 173 LALA-SADSRIKTVDATRPLEQVTAALQQTLTQWLQEQ 209 >gi|323126677|gb|ADX23974.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 211 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 64/201 (31%), Positives = 108/201 (53%), Gaps = 5/201 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + + L +R + ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + P+ T+ D+P +IGL R+ + RE LD + V +H++ R+ +L Sbjct: 121 LNRFATDGLEPNLTLYFDVPSEIGLARIAANKN-REVNRLDL---EAVDMHQRVREGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 +A+ QP+R +D++ + V Sbjct: 177 LAQEQPNRIVTIDASKPLEDV 197 >gi|170679734|ref|YP_001744081.1| thymidylate kinase [Escherichia coli SMS-3-5] gi|218700399|ref|YP_002408028.1| thymidylate kinase [Escherichia coli IAI39] gi|300938665|ref|ZP_07153392.1| thymidylate kinase [Escherichia coli MS 21-1] gi|301023303|ref|ZP_07187098.1| thymidylate kinase [Escherichia coli MS 69-1] gi|226732657|sp|B7NKI2|KTHY_ECO7I RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732660|sp|B1LI47|KTHY_ECOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|170517452|gb|ACB15630.1| thymidylate kinase [Escherichia coli SMS-3-5] gi|218370385|emb|CAR18190.1| thymidylate kinase [Escherichia coli IAI39] gi|300397072|gb|EFJ80610.1| thymidylate kinase [Escherichia coli MS 69-1] gi|300456381|gb|EFK19874.1| thymidylate kinase [Escherichia coli MS 21-1] Length = 213 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 21/217 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211 ++A Q H +D+ +SV T + N V EL Sbjct: 176 ELA-AQDKSIHTIDATQPLESVMDAIRTTVTNWVKEL 211 >gi|146295779|ref|YP_001179550.1| dTMP kinase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|259494264|sp|A4XHH4|KTHY_CALS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145409355|gb|ABP66359.1| thymidylate kinase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 206 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/213 (31%), Positives = 115/213 (53%), Gaps = 8/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG +G+GK+T I ++++L+ K Y V TREPGGT R +LL Sbjct: 2 KGKFIVFEGNDGSGKSTQILKVEKYLKEKGYKVVTTREPGGTEVGFRIRKLLLDPAYKMD 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++ AA R +HV+NV+ PAL +G +++CDR++ SS YQG + L Sbjct: 62 GL-TEALLLAADRNEHVKNVLIPALEDGYVVVCDRYILSSIVYQGIVRGVGVENIIKLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I +++ PD IIL L +I L+R L+ + D + ++ H K F ++++ Sbjct: 121 IFEEKIKPDLYIILTLSPEIALQR------LKMAGKNDKLDTENFDFHRKVYNGFKEVSK 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +C +++ + + V + ++ +L++KR Sbjct: 175 -MFKKCVNIEAEGTVEDVFEKVRKVIDDLLKKR 206 >gi|197284751|ref|YP_002150623.1| thymidylate kinase [Proteus mirabilis HI4320] gi|227357756|ref|ZP_03842105.1| thymidylate kinase [Proteus mirabilis ATCC 29906] gi|194682238|emb|CAR41959.1| thymidylate kinase [Proteus mirabilis HI4320] gi|227162085|gb|EEI47099.1| thymidylate kinase [Proteus mirabilis ATCC 29906] Length = 214 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/169 (39%), Positives = 97/169 (57%), Gaps = 6/169 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M + FI EG+EGAGKT+ I +++ Q+ D+ TREPGGTP AE R L+ G+ Sbjct: 1 MKNSKFIVIEGLEGAGKTSAIQTVVDTLKQQGITDLAFTREPGGTPLAEKLRE-LIKQGI 59 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG + Sbjct: 60 EGEKVTDKAELLMLYAARVQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRGIDKALM 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 SL++ + + PD T+ LDL +GL R + R L E +D+F R Sbjct: 120 KSLRDTVLADFKPDLTLYLDLDPAVGLARARARGELDRIEKESMDFFYR 168 >gi|88608604|ref|YP_506430.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama] gi|123491811|sp|Q2GDL6|KTHY_NEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|88600773|gb|ABD46241.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama] Length = 199 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 81/132 (61%), Gaps = 3/132 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EGI+G+GK+T + LL +FL + Y +TREPGGT AE+ R ++L +D Sbjct: 1 MFIVLEGIDGSGKSTQVKLLSKFLAKDGYPCVLTREPGGTSFAESLRSMILHDPIDPM-- 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++ +AR+DH VI PAL EGK+++CDRF+ S+ AYQG D + L +S Sbjct: 59 -ARLLLIVSARVDHYNKVILPALKEGKVVVCDRFIYSTLAYQGYGDKIDLQTILDLHRLS 117 Query: 125 VQEVMPDCTIIL 136 V PD T++L Sbjct: 118 GCLVEPDLTLLL 129 >gi|319943555|ref|ZP_08017837.1| thymidylate kinase [Lautropia mirabilis ATCC 51599] gi|319743370|gb|EFV95775.1| thymidylate kinase [Lautropia mirabilis ATCC 51599] Length = 230 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/163 (40%), Positives = 96/163 (58%), Gaps = 5/163 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK+TH+ +L+ + V ++REPGG+P AE R +LL+ +E Sbjct: 9 GCFITFEGIDGAGKSTHVGACVDWLRAQGETVVLSREPGGSPLAERLRELLLT---EEMQ 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA++ AAR DH+ +IRPAL G+ ++CDRF DS++AYQG +L L+ Sbjct: 66 PQTEALLAFAARSDHLHTLIRPALAAGQWVVCDRFTDSTFAYQGGGSDVDTTWLAQLEAQ 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 + P T + DLP ++ R S E+ LDYFER Sbjct: 126 VQDGLQPVRTYLFDLPPEVAAARRAAVRSADRFEARALDYFER 168 >gi|116747846|ref|YP_844533.1| dTMP kinase [Syntrophobacter fumaroxidans MPOB] gi|116696910|gb|ABK16098.1| thymidylate kinase [Syntrophobacter fumaroxidans MPOB] Length = 222 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 67/210 (31%), Positives = 103/210 (49%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 S F++FEGI+G GK+T I L +L R TREPGGT E R +LL Sbjct: 15 SPKFVTFEGIDGCGKSTLIDELASWLDRTRVPYVKTREPGGTSLGEKIRGLLLDPAHRGM 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +++ A+R V +I PAL G +L DR++D++ AYQG L LQ Sbjct: 75 NRQTEVLLYTASRAQLVAEIILPALKSGAWVLADRYIDATLAYQGYGRELDPDPLRRLQH 134 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + Q ++PD T++LD +D R+ R + D E ++ HE+ + +LD+A Sbjct: 135 WATQALVPDKTVLLDCGIDTAAARMSAR-----NHRPDRIEMEERAFHERVKAGYLDLAS 189 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D+ V + E+V Sbjct: 190 LDPGRFIVLDAEKPLPEVIADFRAAFREIV 219 >gi|260893950|ref|YP_003240047.1| thymidylate kinase [Ammonifex degensii KC4] gi|260866091|gb|ACX53197.1| thymidylate kinase [Ammonifex degensii KC4] Length = 202 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 75/221 (33%), Positives = 118/221 (53%), Gaps = 25/221 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EGI+G GKTT +L + L+ + +V REPGGT EA R +L +E Sbjct: 3 GFFIVLEGIDGVGKTTQARILAQKLREQGREVVEVREPGGTRLGEAIRELLQK---EELA 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA +F A+R VE VI+PAL +GK+++ DRF S+ AYQG + L D L ++ Sbjct: 60 PWAEACLFLASRAQLVEEVIKPALAKGKVVVGDRFSLSTLAYQG----ALGLEPDKLAQL 115 Query: 124 S---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+++DL + L R + LRE +K ++ E+ +L++ Sbjct: 116 NSWVTGGLEPDLTLVIDLKAEEALAR--GKGDLREE-----IRQKLEIVRER----YLNL 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 A+ + + +VD S + V+ I W LV++ ++ SS Sbjct: 165 AKERAAKVLVVDGQGSVEEVSRRI----WALVEEALARWSS 201 >gi|90413263|ref|ZP_01221257.1| putative thymidylate kinase [Photobacterium profundum 3TCK] gi|90325664|gb|EAS42127.1| putative thymidylate kinase [Photobacterium profundum 3TCK] Length = 209 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGK+T I ++ + TREPGGTP AE R ++ DE Sbjct: 5 FIVIEGLEGAGKSTAIQQVIDTLAAHGIENPESTREPGGTPLAEQMRALIKDGHPDEPLT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR+ V+N+I+PAL EG+ ++ DR SS AYQG +++L++ Sbjct: 65 DMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI +D+ +GL+R + R LD E+ +V + R FL+++ N Sbjct: 125 VLGDFCPDLTIYMDIDPILGLERARGRGE------LDRIEKMNVDFFHRARARFLELSEN 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P + I+D++ S + V +++ + ++K+ Sbjct: 179 NP-KVIIIDASQSLECVTSDLKQALNHWLEKQ 209 >gi|297579520|ref|ZP_06941448.1| thymidylate kinase [Vibrio cholerae RC385] gi|297537114|gb|EFH75947.1| thymidylate kinase [Vibrio cholerae RC385] Length = 212 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++ LQ+ D + TREPGGT AE R ++ +E Sbjct: 5 FIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + SL++ Sbjct: 65 DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T+ LD+ +GL+R + R LD E+ + E+ R+ +L++A N Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMGISFFERARERYLELA-N 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D ++D+A S + V +I Sbjct: 178 SDDSVVMIDAAQSIEQVTADI 198 >gi|323491965|ref|ZP_08097134.1| thymidylate kinase [Vibrio brasiliensis LMG 20546] gi|323313823|gb|EGA66918.1| thymidylate kinase [Vibrio brasiliensis LMG 20546] Length = 209 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 9/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVL-LSCG 58 M + FI EG+EGAGK+T I+ + L++ + + TREPGGT AE R ++ Sbjct: 1 MKNAKFIVIEGLEGAGKSTAINAVLETLKQAGVERIQHTREPGGTALAEKLRTLVKQEHE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL +G+ ++ DR SS AYQG + Sbjct: 61 GEELQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIPRETML 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD TI LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 ALKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 +IA NQ D ++++ VA +I Sbjct: 175 EIA-NQDDSVIVINAEQEIPQVAADI 199 >gi|26247240|ref|NP_753280.1| thymidylate kinase [Escherichia coli CFT073] gi|227886546|ref|ZP_04004351.1| thymidylate kinase [Escherichia coli 83972] gi|300974436|ref|ZP_07172613.1| thymidylate kinase [Escherichia coli MS 45-1] gi|301051116|ref|ZP_07197949.1| thymidylate kinase [Escherichia coli MS 185-1] gi|31563157|sp|Q8FIN9|KTHY_ECOL6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|26107641|gb|AAN79840.1|AE016759_114 Thymidylate kinase [Escherichia coli CFT073] gi|227836750|gb|EEJ47216.1| thymidylate kinase [Escherichia coli 83972] gi|300297242|gb|EFJ53627.1| thymidylate kinase [Escherichia coli MS 185-1] gi|300410570|gb|EFJ94108.1| thymidylate kinase [Escherichia coli MS 45-1] gi|307553099|gb|ADN45874.1| thymidylate kinase [Escherichia coli ABU 83972] gi|315291041|gb|EFU50404.1| thymidylate kinase [Escherichia coli MS 153-1] Length = 213 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 21/217 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + V PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGGVRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211 ++A Q H +D+ ++V T + N V EL Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTNWVKEL 211 >gi|315612950|ref|ZP_07887861.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296] gi|315315060|gb|EFU63101.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296] Length = 212 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 4/200 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ S RE LD + + +H+K R+ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAAN-SDREVNRLDM---EGLDLHKKVRKGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + +R +D++ + V Sbjct: 177 LDKEGNRMVKIDASLPLEQV 196 >gi|239948423|ref|ZP_04700176.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922699|gb|EER22723.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis] Length = 203 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 87/150 (58%), Gaps = 3/150 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTLVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + + +MPD T +D+ D +KRV +R Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSR 150 >gi|293364068|ref|ZP_06610804.1| dTMP kinase [Mycoplasma alligatoris A21JP2] gi|292552558|gb|EFF41332.1| dTMP kinase [Mycoplasma alligatoris A21JP2] Length = 216 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 71/202 (35%), Positives = 112/202 (55%), Gaps = 13/202 (6%) Query: 5 LFISFEGIEGAGKTTHI-SLLKRFLQR-KNYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60 +FI+FEG++G+GKTT I L+ L++ N +TREPGG EA R ++L Sbjct: 1 MFITFEGLDGSGKTTIIEKFLENILEKFPNLKYVLTREPGGKDIVEAEKIREIILDKK-S 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + EA++++A+R H+E+VI PAL ++LCDR++DS YAYQG S +++ L Sbjct: 60 QLSSVTEALLYSASRRIHLESVIWPALENNHLVLCDRYVDSFYAYQGYARSLGVEYVEEL 119 Query: 121 QEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ + + MPD TI D+ P D +R+ NR D + + H K +L Sbjct: 120 TKLVIDKTMPDITIFFDINPADSKKRRLANR------LVHDRMDDETEAFHNKVYGGYLK 173 Query: 180 -IARNQPDRCHIVDSAHSFQSV 200 I + + DR IVD++ S V Sbjct: 174 IIEKEKSDRFIIVDASKSIDEV 195 >gi|166154398|ref|YP_001654516.1| thymidylate kinase [Chlamydia trachomatis 434/Bu] gi|166155273|ref|YP_001653528.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335657|ref|ZP_07223901.1| thymidylate kinase [Chlamydia trachomatis L2tet1] gi|238687405|sp|B0B9T8|KTHY_CHLT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687461|sp|B0BBG8|KTHY_CHLTB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|165930386|emb|CAP03879.1| thymidylate kinase [Chlamydia trachomatis 434/Bu] gi|165931261|emb|CAP06833.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 203 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 99/191 (51%), Gaps = 9/191 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT I L + L + ++ TREPGG ++ R +LL + Sbjct: 1 MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 AE ++F AAR H++ I PAL GK ++ DRF DS+ YQG F+ +L Sbjct: 60 YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + +PD +LD+P GL R + LD FE+K + H+ R+ FL +A Sbjct: 120 VGDKPFLPDIIFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173 Query: 183 NQPDRCHIVDS 193 PDR ++D+ Sbjct: 174 KAPDRYKVLDA 184 >gi|120598611|ref|YP_963185.1| thymidylate kinase [Shewanella sp. W3-18-1] gi|146293310|ref|YP_001183734.1| thymidylate kinase [Shewanella putrefaciens CN-32] gi|120558704|gb|ABM24631.1| thymidylate kinase [Shewanella sp. W3-18-1] gi|145565000|gb|ABP75935.1| thymidylate kinase [Shewanella putrefaciens CN-32] gi|319426610|gb|ADV54684.1| thymidylate kinase [Shewanella putrefaciens 200] Length = 208 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 115/205 (56%), Gaps = 10/205 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDEFG 63 FI EG+EGAGK++ I+L++ F+++ + TREPGGTP AE R ++ ++ D Sbjct: 7 FIVIEGLEGAGKSSAITLIRDFIEKHTGRAPICTREPGGTPLAERIRDLVKIADPSDPLC 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E+E ++ AAR V NVI+PAL +G+ +L DR SS AYQG L ++++ Sbjct: 67 DESECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMPL-VEAVSAA 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ PD T+ LDL +GL R R LD E++ + E+ R +L +A + Sbjct: 126 TLKGFKPDLTLYLDLDPKLGLTRAAKRGE------LDRIEQQTIDFFERARATYLKLA-S 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + D ++D++ + V +IL ++ Sbjct: 179 EDDSIVVIDASQTMAEVHKDILAVL 203 >gi|261209807|ref|ZP_05924109.1| thymidylate kinase [Vibrio sp. RC341] gi|260841105|gb|EEX67625.1| thymidylate kinase [Vibrio sp. RC341] Length = 212 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 16/209 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ L + + + TREPGGT AE R ++ Sbjct: 1 MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTVLAEKLRTLVKE--- 56 Query: 60 DEFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 D G E E ++ AAR+ VENVI+PAL +G+ ++ DR SS AYQG Sbjct: 57 DHPGEELKDITELLLVYAARVQLVENVIKPALAKGQWVVGDRHDMSSQAYQGGGRQIAPS 116 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + SL++ ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ Sbjct: 117 TMLSLKQTALGNFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQ 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204 +L++A + D ++++A S + VAT+I Sbjct: 171 RYLELA-EEDDSVVLINAAQSVEQVATDI 198 >gi|56478513|ref|YP_160102.1| thymidylate kinase [Aromatoleum aromaticum EbN1] gi|56314556|emb|CAI09201.1| Thymidylate kinase [Aromatoleum aromaticum EbN1] Length = 210 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 14/208 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEGI+GAGK++ I+ + L+ + V TREPGGT E R +LL + E Sbjct: 10 FITFEGIDGAGKSSQIAAVVALLEARGLCVEQTREPGGTALGERLRELLLH---EPMHLE 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GER--DSSQHLFLDSLQE 122 EA++ AAR +H+ I PAL G+ ++ DRF D++YAYQ G R D ++ L++ Sbjct: 67 TEALLMFAARREHLAARILPALAAGRWVVSDRFSDATYAYQVGGRGLDPAKFAALEAWVH 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 Q PD T++ DLP ++ R+ + A D FER+ E+ R +L+ AR Sbjct: 127 PGFQ---PDLTLVFDLPPEVAAARLA-----KGGAEPDRFEREQRDFFERVRAAYLERAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R I+D+ + +S+ + IV E Sbjct: 179 MAPGRIRIIDAGGTAESIRAEVEAIVEE 206 >gi|258540440|ref|YP_003174939.1| thymidylate kinase [Lactobacillus rhamnosus Lc 705] gi|257152116|emb|CAR91088.1| Thymidylate kinase [Lactobacillus rhamnosus Lc 705] Length = 181 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 57/176 (32%), Positives = 92/176 (52%), Gaps = 3/176 (1%) Query: 35 VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 +H+TREPGG +E R V+L A EA+++AA+R H+ VI+PAL G I++ Sbjct: 1 MHLTREPGGAKISEMIRDVILDPKNTAMDARTEALLYAASRRQHLVEVIQPALAHGDIVV 60 Query: 95 CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 CDRF+DSS AYQG + + + + + PD T+ LD+PV +GL R+ R Sbjct: 61 CDRFVDSSVAYQGGGRQIGTQAVLQMNQFATAGLEPDLTVYLDVPVQVGLDRIMAHQGER 120 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + D +++ + HE+ ++ + + P R VD+ +V T + E Sbjct: 121 Q---YDRLDQESLAFHERVHAAYMKLVADNPKRIVTVDATQPLAAVVTAAFMTITE 173 >gi|24374155|ref|NP_718198.1| thymidylate kinase [Shewanella oneidensis MR-1] gi|46576581|sp|Q8EDX8|KTHY_SHEON RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|24348659|gb|AAN55642.1|AE015703_4 thymidylate kinase [Shewanella oneidensis MR-1] Length = 209 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 16/211 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVD 60 S FI EG+EGAGK++ I+L++ F+++ V TREPGGTP AE R ++ ++ D Sbjct: 5 SAKFIVVEGLEGAGKSSAIALIRDFIEKHTGHAPVCTREPGGTPLAERIRDLVKIADPSD 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+E ++ AAR V NVI+PAL +G +L DR SS AYQG L ++++ Sbjct: 65 PLCDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRGLMPL-VEAV 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 +++ PD T+ LDL +GL+R R L E +D+FER R +L Sbjct: 124 SNATLKGFKPDLTLYLDLDPKLGLQRAAKRGELDRIEQQAIDFFERA--------RATYL 175 Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIV 208 +A D C +V D++ + V +IL ++ Sbjct: 176 KLASE--DECIVVIDASQTMAEVHKDILAVL 204 >gi|283784887|ref|YP_003364752.1| Thymidylate kinase [Citrobacter rodentium ICC168] gi|282948341|emb|CBG87926.1| Thymidylate kinase [Citrobacter rodentium ICC168] Length = 213 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ LQ+ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLQQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VIRPAL G ++ DR S+ AYQG L +L+ Sbjct: 65 ICDKAEVLMFYAARVQLVETVIRPALANGAWVIGDRHDLSTQAYQGGGRGIDRHMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A P +D+ +V +I +V E V+++ Sbjct: 177 LAAQDPG-IRTIDATQPLDAVMHSIRTVVSEWVKEQ 211 >gi|6729847|pdb|4TMK|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate Inhibitor Tp5a gi|6729850|pdb|5TMP|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate Inhibitor Aztp5a Length = 213 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R +LL S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A Q H +D+ ++V I V V++ Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|15618193|ref|NP_224478.1| thymidylate kinase [Chlamydophila pneumoniae CWL029] gi|15835808|ref|NP_300332.1| thymidylate kinase [Chlamydophila pneumoniae J138] gi|16752765|ref|NP_445033.1| thymidylate kinase [Chlamydophila pneumoniae AR39] gi|33241615|ref|NP_876556.1| thymidylate kinase [Chlamydophila pneumoniae TW-183] gi|8134529|sp|Q9Z8R5|KTHY_CHLPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|4376546|gb|AAD18422.1| Thymidylate Kinase [Chlamydophila pneumoniae CWL029] gi|7189404|gb|AAF38316.1| thymidylate kinase [Chlamydophila pneumoniae AR39] gi|8978647|dbj|BAA98483.1| thymidylate kinase [Chlamydophila pneumoniae J138] gi|33236124|gb|AAP98213.1| dTMP kinase [Chlamydophila pneumoniae TW-183] gi|269303148|gb|ACZ33248.1| thymidylate kinase [Chlamydophila pneumoniae LPCoLN] Length = 206 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 8/203 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ L L ++ V +TREPGG E R ++L E Sbjct: 1 MFIVIEGGEGSGKSSLAKALGDQLVAQDRKVLLTREPGGCLIGERLRDLILEPPHLELSR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 E +F +R H++ VI PAL +G I++C+RF DS+ YQG + F+ L + Sbjct: 61 CCELFLFLGSRAQHIQEVIIPALRDGYIVICERFHDSTIVYQGIAEGLGADFVADLCSKV 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +P+ ++LD+P DIGL+R + D FE+K + H + R+ FL +A Sbjct: 121 VGPTPFLPNFVLLLDIPADIGLQRKHRQ------KVFDKFEKKPLSYHNRIREGFLSLAS 174 Query: 183 NQPDRCHIVDSAHSFQSVATNIL 205 P R ++D+ S S+ ++ Sbjct: 175 ADPSRYLVLDARESLASLIDKVM 197 >gi|85713264|ref|ZP_01044288.1| Thymidylate kinase [Idiomarina baltica OS145] gi|85692908|gb|EAQ30882.1| Thymidylate kinase [Idiomarina baltica OS145] Length = 205 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 109/207 (52%), Gaps = 7/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F+ EG+EGAGK++ ++ + LQ K REPGGTP AEA R ++ ++ Sbjct: 3 GKFVVIEGLEGAGKSSAMASVVSHLQAKGIRTETVREPGGTPMAEAIRSLVKQRWEEQVQ 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ A+R+ V+ VI PAL +G ++ DR SS AYQG L+ L++I Sbjct: 63 PATELLLMYASRVQLVKTVIEPALEQGAWVIGDRHDLSSQAYQGGGRELGAELLEKLKDI 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ +PD T+ LD+ + GL+R + R LD E +D+ + R +L++A+ Sbjct: 123 ALGSFVPDLTLYLDVDEETGLQRARGR------GELDRIEEEDIEFFRRTRTRYLELAKR 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 P+ I+++ +V IL + E Sbjct: 177 DPN-IVIINANQEMLNVHQAILRALEE 202 >gi|261339399|ref|ZP_05967257.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316] gi|288318200|gb|EFC57138.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316] Length = 213 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVDTLNTLGVADIVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +GK ++ DR S+ AYQG L +L+ Sbjct: 65 INDKAEVLMFYAARVQLVETVIKPALADGKWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A Q +D+ S V I V +Q++ Sbjct: 177 LA-GQDKTIRTIDATQSLDDVTRAIQQTVTTWLQEQ 211 >gi|218689050|ref|YP_002397262.1| thymidylate kinase [Escherichia coli ED1a] gi|254808292|sp|B7MTM8|KTHY_ECO81 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218426614|emb|CAR07442.1| thymidylate kinase [Escherichia coli ED1a] Length = 213 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 21/217 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211 ++A Q H +D+ ++V T + N V EL Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMGAIRTTVTNWVKEL 211 >gi|110641274|ref|YP_669004.1| thymidylate kinase [Escherichia coli 536] gi|191174621|ref|ZP_03036109.1| thymidylate kinase [Escherichia coli F11] gi|215486309|ref|YP_002328740.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69] gi|218704509|ref|YP_002412028.1| thymidylate kinase [Escherichia coli UMN026] gi|293404386|ref|ZP_06648380.1| tmk [Escherichia coli FVEC1412] gi|293409463|ref|ZP_06653039.1| thymidylate kinase [Escherichia coli B354] gi|298380163|ref|ZP_06989768.1| dTMP kinase [Escherichia coli FVEC1302] gi|300896858|ref|ZP_07115350.1| thymidylate kinase [Escherichia coli MS 198-1] gi|300982521|ref|ZP_07176171.1| thymidylate kinase [Escherichia coli MS 200-1] gi|306814053|ref|ZP_07448226.1| thymidylate kinase [Escherichia coli NC101] gi|312968825|ref|ZP_07783032.1| thymidylate kinase [Escherichia coli 2362-75] gi|331646355|ref|ZP_08347458.1| dTMP kinase [Escherichia coli M605] gi|331662506|ref|ZP_08363429.1| dTMP kinase [Escherichia coli TA143] gi|331682603|ref|ZP_08383222.1| dTMP kinase [Escherichia coli H299] gi|122958415|sp|Q0TIX6|KTHY_ECOL5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732659|sp|B7NAX6|KTHY_ECOLU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808290|sp|B7UPB4|KTHY_ECO27 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110342866|gb|ABG69103.1| thymidylate kinase [Escherichia coli 536] gi|190905100|gb|EDV64751.1| thymidylate kinase [Escherichia coli F11] gi|215264381|emb|CAS08738.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69] gi|218431606|emb|CAR12485.1| thymidylate kinase [Escherichia coli UMN026] gi|222032851|emb|CAP75590.1| Thymidylate kinase [Escherichia coli LF82] gi|281178207|dbj|BAI54537.1| thymidylate kinase [Escherichia coli SE15] gi|284920923|emb|CBG33986.1| Thymidylate kinase [Escherichia coli 042] gi|291428972|gb|EFF01997.1| tmk [Escherichia coli FVEC1412] gi|291469931|gb|EFF12415.1| thymidylate kinase [Escherichia coli B354] gi|298279861|gb|EFI21369.1| dTMP kinase [Escherichia coli FVEC1302] gi|300307167|gb|EFJ61687.1| thymidylate kinase [Escherichia coli MS 200-1] gi|300359303|gb|EFJ75173.1| thymidylate kinase [Escherichia coli MS 198-1] gi|305852690|gb|EFM53138.1| thymidylate kinase [Escherichia coli NC101] gi|312286227|gb|EFR14140.1| thymidylate kinase [Escherichia coli 2362-75] gi|312945660|gb|ADR26487.1| thymidylate kinase [Escherichia coli O83:H1 str. NRG 857C] gi|320197575|gb|EFW72188.1| Thymidylate kinase [Escherichia coli WV_060327] gi|323190518|gb|EFZ75791.1| thymidylate kinase [Escherichia coli RN587/1] gi|324013268|gb|EGB82487.1| thymidylate kinase [Escherichia coli MS 60-1] gi|330910913|gb|EGH39423.1| thymidylate kinase [Escherichia coli AA86] gi|331045107|gb|EGI17234.1| dTMP kinase [Escherichia coli M605] gi|331060928|gb|EGI32892.1| dTMP kinase [Escherichia coli TA143] gi|331080234|gb|EGI51413.1| dTMP kinase [Escherichia coli H299] Length = 213 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 117/217 (53%), Gaps = 21/217 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211 ++A Q H +D+ ++V T + N V EL Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTNWVKEL 211 >gi|304397225|ref|ZP_07379104.1| thymidylate kinase [Pantoea sp. aB] gi|304355374|gb|EFM19742.1| thymidylate kinase [Pantoea sp. aB] Length = 210 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT +++ R D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDAIVATLRARGINDLVFTREPGGTPLAEQLR-TLVKQGI 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 59 EGEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSELM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +L++ + + PD T+ LD+ DIGL+R + R LD E++ + E+ R + Sbjct: 119 QTLRDAVLGDFRPDLTLYLDVTPDIGLQRARAR------GELDRIEQESLRFFERTRARY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L +A + P +D+ S + V ++ Sbjct: 173 LTLAADDPT-ILTIDATQSLEEVTASL 198 >gi|166221829|sp|Q4A8A6|KTHY_MYCH7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|144575350|gb|AAZ53633.2| thymidylate kinase [Mycoplasma hyopneumoniae 7448] Length = 211 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 11/169 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K D+ T EPGG EA R LLS + Sbjct: 1 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLSKN-N 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 60 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119 Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164 + + PD TI LD+ + +G+ R NR L E+ ++++ER Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERMGIFRDHNRDRL-ENKGVEFYER 167 >gi|229514876|ref|ZP_04404337.1| thymidylate kinase [Vibrio cholerae TMA 21] gi|229348856|gb|EEO13814.1| thymidylate kinase [Vibrio cholerae TMA 21] Length = 212 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++ L++ D + TREPGGT AE R ++ +E Sbjct: 5 FIVIEGLEGAGKSTAIQVVVETLKQNGIDHITRTREPGGTLLAEKLRALVKEEHPGEELQ 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + SL++ Sbjct: 65 DITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L++ N Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYLELT-N 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D ++D+A S + V +I Sbjct: 178 SDDSVVMIDAAQSIEQVTAHI 198 >gi|157146204|ref|YP_001453523.1| thymidylate kinase [Citrobacter koseri ATCC BAA-895] gi|166221737|sp|A8AHX4|KTHY_CITK8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157083409|gb|ABV13087.1| hypothetical protein CKO_01960 [Citrobacter koseri ATCC BAA-895] Length = 213 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ +D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKSVGDET 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E LD+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESLDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A + +D+ ++V +I V ++++ Sbjct: 177 LAASDAS-IRTIDATQPLEAVMNDIRTTVTAWIKEQ 211 >gi|271500137|ref|YP_003333162.1| thymidylate kinase [Dickeya dadantii Ech586] gi|270343692|gb|ACZ76457.1| thymidylate kinase [Dickeya dadantii Ech586] Length = 214 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 76/220 (34%), Positives = 116/220 (52%), Gaps = 12/220 (5%) Query: 1 MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKT+ H +++ + D+ TREPGGTP AE R L+ GV Sbjct: 1 MNSK-FIVIEGLEGAGKTSAHAVVVETLREFGIDDIVFTREPGGTPLAEKLR-TLIKQGV 58 Query: 60 DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E +AE ++ AAR+ VENVIRPAL G ++ DR SS AYQG + Sbjct: 59 AEEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGMDPQLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L++ + PD T+ LD+P ++GLKR + R LD E++ + E+ R + Sbjct: 119 ALLRDTVLGTFRPDLTLYLDIPPELGLKRARQR------GELDRIEQESLAFFERTRARY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A + VD++ + V +I ++ + +Q+ + Sbjct: 173 QQLA-AADNSIVTVDASRGLEQVNADIRRVLRDWLQQLIG 211 >gi|72080598|ref|YP_287656.1| thymidylate kinase [Mycoplasma hyopneumoniae 7448] Length = 213 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 11/169 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K D+ T EPGG EA R LLS + Sbjct: 3 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLSKN-N 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 62 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 121 Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164 + + PD TI LD+ + +G+ R NR L E+ ++++ER Sbjct: 122 NSLISENTFPDLTIFLDIKISKSFERMGIFRDHNRDRL-ENKGVEFYER 169 >gi|147669348|ref|YP_001214166.1| thymidylate kinase [Dehalococcoides sp. BAV1] gi|189028832|sp|A5FR84|KTHY_DEHSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146270296|gb|ABQ17288.1| thymidylate kinase [Dehalococcoides sp. BAV1] Length = 208 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 13/193 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++K +T EPGG+ + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKKGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121 E ++F A+R ++NVI+PAL +GKI++CDR+ DS+ AYQG + L LD+++ Sbjct: 63 LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQG---YGRGLDLDTVKCVN 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++PD TI LD+ L R + D FE ++ H++ R F I Sbjct: 120 SLASGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIY 172 Query: 182 RNQPDRCHIVDSA 194 +PDR +D++ Sbjct: 173 ATEPDRFLKLDAS 185 >gi|32490843|ref|NP_871097.1| hypothetical protein WGLp094 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340185|sp|Q8D3A7|KTHY_WIGBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|25166049|dbj|BAC24240.1| tmk [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 234 Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 70/230 (30%), Positives = 122/230 (53%), Gaps = 20/230 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63 FI EG+EG+GKT IS + L ++ +V TREPGGTP AE+ R ++ G ++ Sbjct: 6 FIVIEGLEGSGKTNAISKIVNLLNKQGIKNVIFTREPGGTPLAESLRTLIKEGVGYEKIT 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR+ VE+VI+PAL G ++ DR SS AYQG L L+E+ Sbjct: 66 DNAELLMIYAARIQLVESVIKPALENGSWVVGDRHDLSSLAYQGGGRKIDTKILKMLREV 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-----------------SACLDYFERKD 166 +++ PD T LD+P +GL R++ R ++R LD E + Sbjct: 126 FLRDFYPDLTFYLDIPPIMGLARIRARATVRAQIRDKVNKIKRNHSHDIKNALDRIEVEP 185 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + ++ R+ + ++A ++ ++ +D++ S + V I + + + ++K++ Sbjct: 186 ISFFDRTRKKYKELA-SKNEKIITIDASKSLELVNKEIKHQLLKWLKKQI 234 >gi|206579513|ref|YP_002239283.1| thymidylate kinase [Klebsiella pneumoniae 342] gi|288936138|ref|YP_003440197.1| thymidylate kinase [Klebsiella variicola At-22] gi|290510808|ref|ZP_06550178.1| thymidylate kinase [Klebsiella sp. 1_1_55] gi|238057701|sp|B5XXH2|KTHY_KLEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|206568571|gb|ACI10347.1| thymidylate kinase [Klebsiella pneumoniae 342] gi|288890847|gb|ADC59165.1| thymidylate kinase [Klebsiella variicola At-22] gi|289777524|gb|EFD85522.1| thymidylate kinase [Klebsiella sp. 1_1_55] Length = 213 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT L+ LQ +D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTVLAEKLRSLVLDIQSTGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L +L+ Sbjct: 65 INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ ++GL+R + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 P VD+ +VA +I Sbjct: 179 AADPS-IRTVDATQPLDAVARDI 200 >gi|289523214|ref|ZP_06440068.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503757|gb|EFD24921.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 209 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 18/209 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+FEGI+G+GK+TH L L N V +TREPGG R +LL Sbjct: 3 GLFITFEGIDGSGKSTHAKRLYEHLSNIFGNERVLITREPGGWSGGSQLRDILLHSNWRP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +E +F A R +HVE I+PAL +G+I++C+R+ DS+ AYQG + L L+ ++ Sbjct: 63 W---SEFFLFMADRCEHVEEQIKPALAKGQIVICERYTDSTLAYQG---WGKGLPLEEME 116 Query: 122 EIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +PD TI LD+ VD +KR++ R + D E + + +R + + Sbjct: 117 RLFSLLDFPLPDLTIWLDISVDTAMKRIKAR------SASDRLEEERFLAVVRRG--YEE 168 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +++ P R V S + V I +V Sbjct: 169 LSKRNPVRIRRVFSGDEEEKVFEEIARVV 197 >gi|156934415|ref|YP_001438331.1| thymidylate kinase [Cronobacter sakazakii ATCC BAA-894] gi|166221741|sp|A7MFR1|KTHY_ENTS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|156532669|gb|ABU77495.1| hypothetical protein ESA_02246 [Cronobacter sakazakii ATCC BAA-894] Length = 212 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 15/219 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCG 58 S +I EG+EGAGKTT +L+ L+ D+ TREPGGT AE R ++L S G Sbjct: 2 SSKYIVIEGLEGAGKTTARNLVVETLKSLGVTDMTFTREPGGTVLAEKLRSLVLDIKSVG 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L Sbjct: 62 DEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRQLLA 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176 +L++ + + PD T+ LD+ IGL+R + R L E LD+F R R Sbjct: 122 TLRQAVLGDFAPDLTLYLDVDPRIGLERARARGELDRIEQESLDFFNRT--------RAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++A P R +D+ ++V+ +I V VQ++ Sbjct: 174 YLELAAADP-RIITIDACQPLEAVSHDIRATVTRWVQEQ 211 >gi|262043203|ref|ZP_06016339.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039481|gb|EEW40616.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 213 Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT L+ LQ +D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARQLVVETLQSAGIHDLVFTREPGGTILAEKLRSLVLDIQSTGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L +L+ Sbjct: 65 INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ ++GL+R + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 P VD+ +VA +I Sbjct: 179 AADPS-IRTVDATQPLDAVARDI 200 >gi|152969650|ref|YP_001334759.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894132|ref|YP_002918866.1| thymidylate kinase [Klebsiella pneumoniae NTUH-K2044] gi|329999483|ref|ZP_08303437.1| dTMP kinase [Klebsiella sp. MS 92-3] gi|166221748|sp|A6T7F8|KTHY_KLEP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150954499|gb|ABR76529.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546448|dbj|BAH62799.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538309|gb|EGF64448.1| dTMP kinase [Klebsiella sp. MS 92-3] Length = 213 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 70/203 (34%), Positives = 109/203 (53%), Gaps = 11/203 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT L+ LQ +D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTILAEKLRSLVLDIQSTGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L +L+ Sbjct: 65 INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ ++GL+R + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 P VD+ +VA +I Sbjct: 179 AADPS-IRTVDATQPLDAVARDI 200 >gi|288818972|ref|YP_003433320.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6] gi|288788372|dbj|BAI70119.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6] gi|308752557|gb|ADO46040.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6] Length = 199 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 107/206 (51%), Gaps = 14/206 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EGI+G+GKTT +LL +L+ K + + R+PG TP AE R +++S +D Sbjct: 3 GFLITLEGIDGSGKTTQANLLYEYLRSKGHKASLYRDPGSTPLAEKIRELIMSFSLDPI- 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F AR V I P L +G +++ DRF+DS+ AYQG ++ L I Sbjct: 62 --TELLLFETARSSLVWEKILPDLQKGNVVIVDRFIDSTVAYQGYGREINLGTVNVLNHI 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T IL +P+++ L R+ + FE KD + K R + I + Sbjct: 120 ATRGRKPDLTFILHVPLEVALSRIGKDKT--------KFEDKDFL--RKVRDAYFLIQSS 169 Query: 184 QPDR-CHIVDSAHSFQSVATNILNIV 208 + +R +++D+ + V I+ IV Sbjct: 170 EKERQIYLIDANREKEEVFKEIVKIV 195 >gi|291282118|ref|YP_003498936.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615] gi|209773158|gb|ACI84891.1| thymidylate kinase [Escherichia coli] gi|209773164|gb|ACI84894.1| thymidylate kinase [Escherichia coli] gi|290761991|gb|ADD55952.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615] gi|320637549|gb|EFX07349.1| thymidylate kinase [Escherichia coli O157:H7 str. G5101] gi|320643110|gb|EFX12311.1| thymidylate kinase [Escherichia coli O157:H- str. 493-89] gi|320648568|gb|EFX17223.1| thymidylate kinase [Escherichia coli O157:H- str. H 2687] gi|320653882|gb|EFX21956.1| thymidylate kinase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659362|gb|EFX26931.1| thymidylate kinase [Escherichia coli O55:H7 str. USDA 5905] gi|320664497|gb|EFX31648.1| thymidylate kinase [Escherichia coli O157:H7 str. LSU-61] Length = 213 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A Q H +D+ ++V I V V++ Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTRWVKE 210 >gi|312877610|ref|ZP_07737568.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A] gi|311795620|gb|EFR11991.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A] Length = 207 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 61 MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D+ H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIKI------AGKTDRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 ++ +RC +++ S + V +L Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197 >gi|313678822|ref|YP_004056562.1| dTMP kinase [Mycoplasma bovis PG45] gi|312950663|gb|ADR25258.1| dTMP kinase [Mycoplasma bovis PG45] Length = 215 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 12/211 (5%) Query: 5 LFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT + L K Q+ N VTREPGG +E R ++L Sbjct: 1 MFITFEGLDGSGKTTIVQKLVDKLLEQKPNLSFIVTREPGGKNVRESEKIRELILDKE-S 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++ A+R H+E VI PAL E K++LCDR++DS YAYQG F L Sbjct: 60 HLSPIAEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179 E+ ++ +PD TI +D+ + Q+ Y S + D + + + H K + + Sbjct: 120 TEMVIENTVPDITIYIDITAE------QSEYRRNVSRLISDRLDSESLEFHRKVFDAYRE 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P+R +++ S + ++ +++ Sbjct: 174 VISLNPERFVVINGLQSIPEILDEVITKLFQ 204 >gi|260597469|ref|YP_003210040.1| thymidylate kinase [Cronobacter turicensis z3032] gi|260216646|emb|CBA29964.1| Thymidylate kinase [Cronobacter turicensis z3032] Length = 212 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/219 (34%), Positives = 115/219 (52%), Gaps = 15/219 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCG 58 S +I EG+EGAGKTT +L+ L+ D+ TREPGGT AE R ++L S G Sbjct: 2 SSKYIVIEGLEGAGKTTARNLVVETLKSLGITDMTFTREPGGTVLAEKLRSLVLDIKSVG 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L Sbjct: 62 DEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRELLA 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQI 176 +L++ + + PD T+ LD+ IGL+R + R L E LD+F R R Sbjct: 122 TLRQTVLGDFAPDLTLYLDVDPRIGLERARARGELDRIEQESLDFFNRT--------RAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++A P R +D+ +V+ +I + + VQ++ Sbjct: 174 YLELAAADP-RIITIDACQPLDAVSRDIRSAIARWVQEQ 211 >gi|197294306|ref|YP_001798847.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853633|emb|CAM11504.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 209 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 66/215 (30%), Positives = 115/215 (53%), Gaps = 19/215 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG E +GKTT +L + L + + +T+EPGG R +L+ + Sbjct: 1 MFISFEGGEASGKTTLARILAQKLSGNKHQIVLTKEPGGYHPFLFIREKILNPEMPPIDL 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + EA+++AA R +H++N+I PAL E KI++CDR+LDSS+ YQG +++ + + + Sbjct: 61 KTEALLYAADRNEHLKNIILPALKENKIVICDRYLDSSFVYQGYARKLGQKYIEYINDFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRV-------QNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ +P+ T LDL I KR+ QNR L + + H+K R+ + Sbjct: 121 LKH-LPNITFYLDLDPVIAKKRLELFRPDKQNRLDL-----------ETIEFHQKIREGY 168 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L +A+ + R + + +S +++ I V L+ Sbjct: 169 LKLAQKENKRIIKIQADNSLPQLSSLIYQKVKHLL 203 >gi|331672613|ref|ZP_08373402.1| dTMP kinase [Escherichia coli TA280] gi|324007852|gb|EGB77071.1| thymidylate kinase [Escherichia coli MS 57-2] gi|331070256|gb|EGI41622.1| dTMP kinase [Escherichia coli TA280] Length = 213 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A Q H +D+ ++V I V V++ Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMGAIRTTVTHWVKE 210 >gi|16129061|ref|NP_415616.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655] gi|24112504|ref|NP_707014.1| thymidylate kinase [Shigella flexneri 2a str. 301] gi|30062632|ref|NP_836803.1| thymidylate kinase [Shigella flexneri 2a str. 2457T] gi|74311659|ref|YP_310078.1| thymidylate kinase [Shigella sonnei Ss046] gi|82544436|ref|YP_408383.1| thymidylate kinase [Shigella boydii Sb227] gi|82777289|ref|YP_403638.1| thymidylate kinase [Shigella dysenteriae Sd197] gi|89107944|ref|AP_001724.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110] gi|110805112|ref|YP_688632.1| thymidylate kinase [Shigella flexneri 5 str. 8401] gi|157157223|ref|YP_001462330.1| thymidylate kinase [Escherichia coli E24377A] gi|157160624|ref|YP_001457942.1| thymidylate kinase [Escherichia coli HS] gi|170020507|ref|YP_001725461.1| thymidylate kinase [Escherichia coli ATCC 8739] gi|170080749|ref|YP_001730069.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B] gi|187732338|ref|YP_001880732.1| thymidylate kinase [Shigella boydii CDC 3083-94] gi|188495742|ref|ZP_03003012.1| thymidylate kinase [Escherichia coli 53638] gi|194429813|ref|ZP_03062327.1| thymidylate kinase [Escherichia coli B171] gi|194433682|ref|ZP_03065958.1| thymidylate kinase [Shigella dysenteriae 1012] gi|209918353|ref|YP_002292437.1| thymidylate kinase [Escherichia coli SE11] gi|218553675|ref|YP_002386588.1| thymidylate kinase [Escherichia coli IAI1] gi|218694631|ref|YP_002402298.1| thymidylate kinase [Escherichia coli 55989] gi|238900352|ref|YP_002926148.1| thymidylate kinase [Escherichia coli BW2952] gi|253773879|ref|YP_003036710.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161204|ref|YP_003044312.1| thymidylate kinase [Escherichia coli B str. REL606] gi|256018646|ref|ZP_05432511.1| thymidylate kinase [Shigella sp. D9] gi|256023205|ref|ZP_05437070.1| thymidylate kinase [Escherichia sp. 4_1_40B] gi|260843338|ref|YP_003221116.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009] gi|260854581|ref|YP_003228472.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368] gi|260867461|ref|YP_003233863.1| thymidylate kinase [Escherichia coli O111:H- str. 11128] gi|293414391|ref|ZP_06657040.1| thymidylate kinase [Escherichia coli B185] gi|293433387|ref|ZP_06661815.1| thymidylate kinase [Escherichia coli B088] gi|297516810|ref|ZP_06935196.1| thymidylate kinase [Escherichia coli OP50] gi|300816798|ref|ZP_07097018.1| thymidylate kinase [Escherichia coli MS 107-1] gi|300821123|ref|ZP_07101272.1| thymidylate kinase [Escherichia coli MS 119-7] gi|300902489|ref|ZP_07120470.1| thymidylate kinase [Escherichia coli MS 84-1] gi|300918704|ref|ZP_07135282.1| thymidylate kinase [Escherichia coli MS 115-1] gi|300922624|ref|ZP_07138722.1| thymidylate kinase [Escherichia coli MS 182-1] gi|300928351|ref|ZP_07143885.1| thymidylate kinase [Escherichia coli MS 187-1] gi|300948684|ref|ZP_07162764.1| thymidylate kinase [Escherichia coli MS 116-1] gi|300956239|ref|ZP_07168549.1| thymidylate kinase [Escherichia coli MS 175-1] gi|301029599|ref|ZP_07192674.1| thymidylate kinase [Escherichia coli MS 196-1] gi|301328531|ref|ZP_07221595.1| thymidylate kinase [Escherichia coli MS 78-1] gi|301644512|ref|ZP_07244506.1| thymidylate kinase [Escherichia coli MS 146-1] gi|307137733|ref|ZP_07497089.1| thymidylate kinase [Escherichia coli H736] gi|307310125|ref|ZP_07589775.1| thymidylate kinase [Escherichia coli W] gi|309788170|ref|ZP_07682776.1| thymidylate kinase [Shigella dysenteriae 1617] gi|309796559|ref|ZP_07690966.1| thymidylate kinase [Escherichia coli MS 145-7] gi|331641641|ref|ZP_08342776.1| dTMP kinase [Escherichia coli H736] gi|331652150|ref|ZP_08353169.1| dTMP kinase [Escherichia coli M718] gi|331667498|ref|ZP_08368362.1| dTMP kinase [Escherichia coli TA271] gi|331676888|ref|ZP_08377584.1| dTMP kinase [Escherichia coli H591] gi|61227288|sp|P0A720|KTHY_ECOLI RecName: Full=Thymidylate kinase; AltName: Full=Thymidine monophosphate kinase; AltName: Full=dTMP kinase; Short=TMPK gi|61227291|sp|P0A721|KTHY_SHIFL RecName: Full=Thymidylate kinase; AltName: Full=Thymidine monophosphate kinase; AltName: Full=dTMP kinase; Short=TMPK gi|123342975|sp|Q0T5T8|KTHY_SHIF8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123559364|sp|Q31ZF3|KTHY_SHIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123562339|sp|Q32EV8|KTHY_SHIDS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123617461|sp|Q3Z319|KTHY_SHISS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166987701|sp|A7ZKK1|KTHY_ECO24 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166987702|sp|A7ZZ55|KTHY_ECOHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189028833|sp|B1IUG7|KTHY_ECOLC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732658|sp|B7LX32|KTHY_ECO8A RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621735|sp|B1XA08|KTHY_ECODH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238057698|sp|B6I9H5|KTHY_ECOSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238689520|sp|B2U523|KTHY_SHIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808291|sp|B7LG31|KTHY_ECO55 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|259494268|sp|C4ZS38|KTHY_ECOBW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1244710|gb|AAB06878.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110] gi|1787340|gb|AAC74182.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655] gi|4062665|dbj|BAA35905.1| thymidylate kinase [Escherichia coli str. K12 substr. W3110] gi|24051393|gb|AAN42721.1| thymidylate kinase [Shigella flexneri 2a str. 301] gi|30040878|gb|AAP16609.1| thymidylate kinase [Shigella flexneri 2a str. 2457T] gi|73855136|gb|AAZ87843.1| thymidylate kinase [Shigella sonnei Ss046] gi|81241437|gb|ABB62147.1| thymidylate kinase [Shigella dysenteriae Sd197] gi|81245847|gb|ABB66555.1| thymidylate kinase [Shigella boydii Sb227] gi|110614660|gb|ABF03327.1| thymidylate kinase [Shigella flexneri 5 str. 8401] gi|157066304|gb|ABV05559.1| thymidylate kinase [Escherichia coli HS] gi|157079253|gb|ABV18961.1| thymidylate kinase [Escherichia coli E24377A] gi|169755435|gb|ACA78134.1| dTMP kinase [Escherichia coli ATCC 8739] gi|169888584|gb|ACB02291.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B] gi|187429330|gb|ACD08604.1| thymidylate kinase [Shigella boydii CDC 3083-94] gi|188490941|gb|EDU66044.1| thymidylate kinase [Escherichia coli 53638] gi|194412160|gb|EDX28468.1| thymidylate kinase [Escherichia coli B171] gi|194418111|gb|EDX34204.1| thymidylate kinase [Shigella dysenteriae 1012] gi|209911612|dbj|BAG76686.1| thymidylate kinase [Escherichia coli SE11] gi|218351363|emb|CAU97069.1| thymidylate kinase [Escherichia coli 55989] gi|218360443|emb|CAQ97997.1| thymidylate kinase [Escherichia coli IAI1] gi|238863660|gb|ACR65658.1| thymidylate kinase [Escherichia coli BW2952] gi|242376901|emb|CAQ31619.1| dTMP kinase [Escherichia coli BL21(DE3)] gi|253324923|gb|ACT29525.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973105|gb|ACT38776.1| thymidylate kinase [Escherichia coli B str. REL606] gi|253977319|gb|ACT42989.1| thymidylate kinase [Escherichia coli BL21(DE3)] gi|257753230|dbj|BAI24732.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368] gi|257758485|dbj|BAI29982.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009] gi|257763817|dbj|BAI35312.1| thymidylate kinase [Escherichia coli O111:H- str. 11128] gi|260449763|gb|ACX40185.1| dTMP kinase [Escherichia coli DH1] gi|281600514|gb|ADA73498.1| Thymidylate kinase [Shigella flexneri 2002017] gi|291324206|gb|EFE63628.1| thymidylate kinase [Escherichia coli B088] gi|291434449|gb|EFF07422.1| thymidylate kinase [Escherichia coli B185] gi|299877521|gb|EFI85732.1| thymidylate kinase [Escherichia coli MS 196-1] gi|300316932|gb|EFJ66716.1| thymidylate kinase [Escherichia coli MS 175-1] gi|300405425|gb|EFJ88963.1| thymidylate kinase [Escherichia coli MS 84-1] gi|300414139|gb|EFJ97449.1| thymidylate kinase [Escherichia coli MS 115-1] gi|300421032|gb|EFK04343.1| thymidylate kinase [Escherichia coli MS 182-1] gi|300451823|gb|EFK15443.1| thymidylate kinase [Escherichia coli MS 116-1] gi|300463609|gb|EFK27102.1| thymidylate kinase [Escherichia coli MS 187-1] gi|300526422|gb|EFK47491.1| thymidylate kinase [Escherichia coli MS 119-7] gi|300530572|gb|EFK51634.1| thymidylate kinase [Escherichia coli MS 107-1] gi|300845077|gb|EFK72837.1| thymidylate kinase [Escherichia coli MS 78-1] gi|301077144|gb|EFK91950.1| thymidylate kinase [Escherichia coli MS 146-1] gi|306909843|gb|EFN40337.1| thymidylate kinase [Escherichia coli W] gi|308119871|gb|EFO57133.1| thymidylate kinase [Escherichia coli MS 145-7] gi|308924022|gb|EFP69523.1| thymidylate kinase [Shigella dysenteriae 1617] gi|309701370|emb|CBJ00671.1| Thymidylate kinase [Escherichia coli ETEC H10407] gi|313650449|gb|EFS14856.1| thymidylate kinase [Shigella flexneri 2a str. 2457T] gi|315060375|gb|ADT74702.1| thymidylate kinase [Escherichia coli W] gi|315135730|dbj|BAJ42889.1| thymidylate kinase [Escherichia coli DH1] gi|315253898|gb|EFU33866.1| thymidylate kinase [Escherichia coli MS 85-1] gi|315618269|gb|EFU98859.1| thymidylate kinase [Escherichia coli 3431] gi|320174249|gb|EFW49410.1| Thymidylate kinase [Shigella dysenteriae CDC 74-1112] gi|320179203|gb|EFW54161.1| Thymidylate kinase [Shigella boydii ATCC 9905] gi|320186954|gb|EFW61667.1| Thymidylate kinase [Shigella flexneri CDC 796-83] gi|320200993|gb|EFW75577.1| Thymidylate kinase [Escherichia coli EC4100B] gi|323163640|gb|EFZ49462.1| thymidylate kinase [Escherichia coli E128010] gi|323165606|gb|EFZ51393.1| thymidylate kinase [Shigella sonnei 53G] gi|323175671|gb|EFZ61265.1| thymidylate kinase [Escherichia coli 1180] gi|323185779|gb|EFZ71140.1| thymidylate kinase [Escherichia coli 1357] gi|323379065|gb|ADX51333.1| thymidylate kinase [Escherichia coli KO11] gi|323937838|gb|EGB34102.1| thymidylate kinase [Escherichia coli E1520] gi|323942567|gb|EGB38734.1| thymidylate kinase [Escherichia coli E482] gi|323947599|gb|EGB43603.1| thymidylate kinase [Escherichia coli H120] gi|323962697|gb|EGB58275.1| thymidylate kinase [Escherichia coli H489] gi|323973313|gb|EGB68502.1| thymidylate kinase [Escherichia coli TA007] gi|324017491|gb|EGB86710.1| thymidylate kinase [Escherichia coli MS 117-3] gi|324117331|gb|EGC11238.1| thymidylate kinase [Escherichia coli E1167] gi|331038439|gb|EGI10659.1| dTMP kinase [Escherichia coli H736] gi|331050428|gb|EGI22486.1| dTMP kinase [Escherichia coli M718] gi|331065083|gb|EGI36978.1| dTMP kinase [Escherichia coli TA271] gi|331075577|gb|EGI46875.1| dTMP kinase [Escherichia coli H591] gi|332089300|gb|EGI94406.1| thymidylate kinase [Shigella boydii 5216-82] gi|332092925|gb|EGI97993.1| thymidylate kinase [Shigella dysenteriae 155-74] gi|332094408|gb|EGI99457.1| thymidylate kinase [Shigella boydii 3594-74] gi|332102067|gb|EGJ05413.1| thymidylate kinase [Shigella sp. D9] Length = 213 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A Q H +D+ ++V I V V++ Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|170768049|ref|ZP_02902502.1| thymidylate kinase [Escherichia albertii TW07627] gi|170122815|gb|EDS91746.1| thymidylate kinase [Escherichia albertii TW07627] Length = 213 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/217 (35%), Positives = 117/217 (53%), Gaps = 17/217 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ +D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A Q H +D+ +V I V V+++ Sbjct: 176 ELA-AQDRSIHTIDATQPLDAVMDAIRTTVTNWVKEQ 211 >gi|57239472|ref|YP_180608.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58579450|ref|YP_197662.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58617504|ref|YP_196703.1| thymidylate kinase [Ehrlichia ruminantium str. Gardel] gi|73920817|sp|Q5FG91|KTHY_EHRRG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920818|sp|Q5HAD6|KTHY_EHRRW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|57161551|emb|CAH58478.1| putative thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58417116|emb|CAI28229.1| Thymidylate kinase [Ehrlichia ruminantium str. Gardel] gi|58418076|emb|CAI27280.1| Thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] Length = 202 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 110/199 (55%), Gaps = 17/199 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSC-GVDE 61 +FI+FEGI+G+GKTT LL +L +V +TREPGGT E+ R++L S +D+ Sbjct: 1 MFITFEGIDGSGKTTQSRLLTEYLSGVYGVDNVILTREPGGTFFNESVRNLLFSTKNLDK 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E + F A R +H VI+PAL + KI++CDRF+DS+ AYQG ++ L Sbjct: 61 L---SELLFFIAMRREHFMKVIKPALTQQKIVICDRFIDSTIAYQGYGHGIDCKLIEELN 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ V ++ P+ T +LD ++ + R + +E D+ + + R F DI Sbjct: 118 DLVV-DIYPNITFVLDSDINQSVARSNK----------NGYEFLDLEFYARVRDGFRDIV 166 Query: 182 RNQPDRCHIVDSAHSFQSV 200 + RC+++ + + +++ Sbjct: 167 KRNQYRCYLITNVDATKNI 185 >gi|121996816|ref|YP_001001603.1| dTMP kinase [Halorhodospira halophila SL1] gi|171769495|sp|A1WSY9|KTHY_HALHL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|121588221|gb|ABM60801.1| thymidylate kinase [Halorhodospira halophila SL1] Length = 215 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 105/210 (50%), Gaps = 6/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG+EGAGKTT + +++ L D + TREPGGTP EA R LL Sbjct: 5 GCFITVEGLEGAGKTTCLQAIEQMLLEAGIDRPLFTREPGGTPFGEALRGALLDPQYRGL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEAEA+ AAR +H+ VIRP L G+ ++ DRF D++YAYQG + L+ Sbjct: 65 TAEAEALTVFAARAEHLAQVIRPTLDAGRWVISDRFTDATYAYQGGGRGLGDERIAVLER 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD T++LD+ +G RV +R D FE++ + R + A Sbjct: 125 WVHGGFTPDRTLLLDVDPTVGRSRVAHR-----GDGEDRFEQERDPFFQAARAAYARRAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +D+ VA + V +L+ Sbjct: 180 ADPERFRCIDANRPEGEVAEQVRAGVADLL 209 >gi|119944852|ref|YP_942532.1| dTMP kinase [Psychromonas ingrahamii 37] gi|119863456|gb|ABM02933.1| thymidylate kinase [Psychromonas ingrahamii 37] Length = 223 Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 10/189 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVL-LSCGVDE 61 FI EG+EGAGK+T +S + ++L ++N D TREPGGT AE R ++ + ++ Sbjct: 16 FIVIEGLEGAGKSTAVSYITKWLFKQNIATCDTVYTREPGGTELAEKMRDIVKIEVTGEK 75 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VE++I+PAL+ GKI++ DR SS AYQG ++ ++ Sbjct: 76 LDDKAELLLMYAARVQLVEHIIKPALVAGKIVVGDRHNMSSLAYQGGGRGIDLALIEVIK 135 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ + D T+ LD+ ++GL+R + R LD ER+ + ++ R +FL + Sbjct: 136 KLALGDFKADLTLYLDIDPELGLQRARGR------GELDRIERQAIDFFDRTRAVFLSLV 189 Query: 182 RNQPDRCHI 190 + I Sbjct: 190 AKDKNAVTI 198 >gi|15801215|ref|NP_287232.1| thymidylate kinase [Escherichia coli O157:H7 EDL933] gi|15830730|ref|NP_309503.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai] gi|195938857|ref|ZP_03084239.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4024] gi|208807792|ref|ZP_03250129.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206] gi|208815733|ref|ZP_03256912.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045] gi|208822400|ref|ZP_03262719.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042] gi|209400206|ref|YP_002269942.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115] gi|217328521|ref|ZP_03444603.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588] gi|254792480|ref|YP_003077317.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359] gi|261226998|ref|ZP_05941279.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK2000] gi|261256232|ref|ZP_05948765.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK966] gi|23821781|sp|Q8X8H6|KTHY_ECO57 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238057697|sp|B5YVW6|KTHY_ECO5E RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12514642|gb|AAG55844.1|AE005319_13 thymidylate kinase [Escherichia coli O157:H7 str. EDL933] gi|13360940|dbj|BAB34899.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai] gi|208727593|gb|EDZ77194.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206] gi|208732381|gb|EDZ81069.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045] gi|208737885|gb|EDZ85568.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042] gi|209161606|gb|ACI39039.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115] gi|209773160|gb|ACI84892.1| thymidylate kinase [Escherichia coli] gi|209773162|gb|ACI84893.1| thymidylate kinase [Escherichia coli] gi|209773166|gb|ACI84895.1| thymidylate kinase [Escherichia coli] gi|217318948|gb|EEC27374.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588] gi|254591880|gb|ACT71241.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359] gi|320188105|gb|EFW62770.1| Thymidylate kinase [Escherichia coli O157:H7 str. EC1212] gi|326339320|gb|EGD63134.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1125] gi|326340401|gb|EGD64204.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1044] Length = 213 Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A Q H +D+ ++V I V V++ Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTRWVKE 210 >gi|289706872|ref|ZP_06503213.1| dTMP kinase [Micrococcus luteus SK58] gi|289556422|gb|EFD49772.1| dTMP kinase [Micrococcus luteus SK58] Length = 219 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 1/205 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG +G+GK+T L L+ ++V +TREPGG+ E R +LL G Sbjct: 9 GLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPGHAPVD 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAAAR H +RPAL G +++ DR++DSS AYQG + +L E Sbjct: 69 PRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALNEW 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD T+++D+ R R + E D ER+ HE R FL A Sbjct: 129 ATDGLVPDLTVLIDVDAATAADRRDRRAAGGEG-TPDRMERETADRHEALRAAFLARAAA 187 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++D A Q + L V Sbjct: 188 APERYLVLDGALPPQELTARALARV 212 >gi|161503708|ref|YP_001570820.1| thymidylate kinase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189030840|sp|A9MGB6|KTHY_SALAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|160865055|gb|ABX21678.1| hypothetical protein SARI_01792 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 213 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 15/218 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A P R +D+ +V +I V VQ + + Sbjct: 177 LAAQDP-RIRTIDATQPLDAVMRDIRATVTTWVQGQAA 213 >gi|332184711|gb|AEE26965.1| Thymidylate kinase [Francisella cf. novicida 3523] Length = 209 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 112/206 (54%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T I+ ++++L++ + TREPGGT AE R+++L D E + Sbjct: 5 FIVIEGLDGAGKSTAINFVRKYLEQNSLAAIYTREPGGTKIAEELRNLVLHNKYDEEIHS 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + +L + Sbjct: 65 DSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRALNDNF 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ +GL+R Q S E A L++F R R++F D+ + Sbjct: 125 LNGCEPDLVIYLDIDPMLGLQRAQKVGSPDRIEKAGLEFFNRT--------RKVFKDLVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + D +D+A S Q V I I+ Sbjct: 177 -ESDNAIEIDAALSIQEVEKQIYLIL 201 >gi|27904814|ref|NP_777940.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|27904212|gb|AAO27045.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 217 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 12/189 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI EGIEG+GKTT LK L +V R+PG TP AE R +L++ Sbjct: 6 MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 65 Query: 60 DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLF 116 +E+ E E ++F AAR+ ++N+I+PAL +G ++ DR+ SS AYQ G + + + Sbjct: 66 NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 125 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L LQ + ++ P+ T LD+ +IGL R++NR +D E+ R Sbjct: 126 L--LQSLFLKNFNPNITFYLDVTPEIGLNRIKNRNE------IDRIEQNTKFFFNNVRNK 177 Query: 177 FLDIARNQP 185 +L++ + +P Sbjct: 178 YLNLIKTKP 186 >gi|29611727|sp|P59500|KTHY_BUCBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 212 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 12/189 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI EGIEG+GKTT LK L +V R+PG TP AE R +L++ Sbjct: 1 MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 60 Query: 60 DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLF 116 +E+ E E ++F AAR+ ++N+I+PAL +G ++ DR+ SS AYQ G + + + Sbjct: 61 NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L LQ + ++ P+ T LD+ +IGL R++NR +D E+ R Sbjct: 121 L--LQSLFLKNFNPNITFYLDVTPEIGLNRIKNRNE------IDRIEQNTKFFFNNVRNK 172 Query: 177 FLDIARNQP 185 +L++ + +P Sbjct: 173 YLNLIKTKP 181 >gi|91210252|ref|YP_540238.1| thymidylate kinase [Escherichia coli UTI89] gi|117623283|ref|YP_852196.1| thymidylate kinase [Escherichia coli APEC O1] gi|218557979|ref|YP_002390892.1| thymidylate kinase [Escherichia coli S88] gi|237706917|ref|ZP_04537398.1| thymidylate kinase [Escherichia sp. 3_2_53FAA] gi|331657160|ref|ZP_08358122.1| dTMP kinase [Escherichia coli TA206] gi|122424166|sp|Q1RD57|KTHY_ECOUT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221740|sp|A1A9Z2|KTHY_ECOK1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732656|sp|B7MJ85|KTHY_ECO45 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91071826|gb|ABE06707.1| thymidylate kinase [Escherichia coli UTI89] gi|115512407|gb|ABJ00482.1| thymidylate kinase [Escherichia coli APEC O1] gi|218364748|emb|CAR02438.1| thymidylate kinase [Escherichia coli S88] gi|226898127|gb|EEH84386.1| thymidylate kinase [Escherichia sp. 3_2_53FAA] gi|294493330|gb|ADE92086.1| thymidylate kinase [Escherichia coli IHE3034] gi|307627432|gb|ADN71736.1| thymidylate kinase [Escherichia coli UM146] gi|315287441|gb|EFU46852.1| thymidylate kinase [Escherichia coli MS 110-3] gi|315296640|gb|EFU55935.1| thymidylate kinase [Escherichia coli MS 16-3] gi|323953216|gb|EGB49082.1| thymidylate kinase [Escherichia coli H252] gi|323957922|gb|EGB53634.1| thymidylate kinase [Escherichia coli H263] gi|331055408|gb|EGI27417.1| dTMP kinase [Escherichia coli TA206] Length = 213 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 116/217 (53%), Gaps = 21/217 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGGFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211 ++A Q H +D+ ++V T + N V EL Sbjct: 176 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTNWVKEL 211 >gi|323967039|gb|EGB62465.1| thymidylate kinase [Escherichia coli M863] gi|327253496|gb|EGE65134.1| thymidylate kinase [Escherichia coli STEC_7v] Length = 213 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 78/217 (35%), Positives = 116/217 (53%), Gaps = 21/217 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R + Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYQ 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVA----TNILNIVWEL 211 ++A Q H +D+ +SV T + N V EL Sbjct: 176 ELA-AQDKSIHTIDATQPLESVMDAIRTTVTNWVKEL 211 >gi|312882454|ref|ZP_07742195.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369854|gb|EFP97365.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122] Length = 211 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 9/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M S FI EG+EGAGK+T I +++ L + TREPGGT AE R ++ Sbjct: 1 MKSAKFIVIEGLEGAGKSTAIRAVEQSLGNLGISQIQKTREPGGTELAEKLRSLVKEEHP 60 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VEN+I+PAL ++ DR SS AYQG + + Sbjct: 61 GEVLQDMTELLLMYAARVQLVENIIKPALENDVWVIGDRHDMSSQAYQGGGRQIANETMS 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ ++ P+ TI LD+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 121 LLKQTALGCFRPNLTIYLDIEPKLGLERARGR------GELDRIEKMDLGFFERTRQRYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A+ + D IVD++ S VA +I +V + VQK Sbjct: 175 ELAK-EDDSVFIVDASQSIAQVAESIDKLVTDWVQK 209 >gi|284007284|emb|CBA72610.1| thymidylate kinase [Arsenophonus nasoniae] Length = 211 Score = 105 bits (261), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 15/208 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE--F 62 +I EG+EGAGKTT I + + L ++ TREPGGTP AE R L+ G+ E Sbjct: 5 YIVIEGLEGAGKTTAIKTVVQTLATVGITEIDFTREPGGTPLAEKLRQ-LIKHGIAEEKV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ +ENVI+PAL +G+ ++ DR SS AYQG + L+ Sbjct: 64 TDKAELLMLYAARIQLIENVIKPALAKGRWVIGDRHDLSSQAYQGGGRGLSPELMKVLRN 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ LD+ +GL+R ++R L E LD+F+R RQ +L++ Sbjct: 124 TILDDFRPDLTLYLDIEPALGLQRARDRGELDRIEKESLDFFKRT--------RQRYLEL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A + D +D+ S + V I +++ Sbjct: 176 A-AEDDTIITIDANQSLEEVQKTIHHVL 202 >gi|67458626|ref|YP_246250.1| thymidylate kinase [Rickettsia felis URRWXCal2] gi|75536908|sp|Q4UMX3|KTHY_RICFE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|67004159|gb|AAY61085.1| Thymidylate kinase [Rickettsia felis URRWXCal2] Length = 206 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 63/194 (32%), Positives = 107/194 (55%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTAVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL +G I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMVRKIIPALQDGHIVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D ++RV +LR + + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIERV----NLRNMS--NKFDVRGIDFYKKIYDCFKEL 174 Query: 181 ARNQPDRCHIVDSA 194 + P+R + ++ Sbjct: 175 SNRFPERIKTIKAS 188 >gi|332178700|gb|AEE14389.1| Thymidylate kinase [Thermodesulfobium narugense DSM 14796] Length = 214 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 102/212 (48%), Gaps = 10/212 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEGIE GKTT LL L V ++PG T E R+ LL Sbjct: 7 GLFITFEGIEKCGKTTQSKLLYDKLLSLGEKVVYLKDPGVTEVGENFRNALLYG--KNIS 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++F A R V I PAL + KI++CDRF DS++AYQG + FL SL + Sbjct: 65 VETEVLLFLACRAQLVNEHIFPALKDDKIVICDRFSDSTFAYQGYGRNVNLSFLKSLDKF 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + PD T + D +R + D E + + H + R +LD+A Sbjct: 125 ATKGIKPDITFLFDFSFFEAKQRFLDSK--------DRMETESIEFHNRVRAGYLDLASM 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +PDR I+ S + + + +L V E +R Sbjct: 177 EPDRFCILYSKLNIEKLHEIVLKKVLERKNER 208 >gi|312793986|ref|YP_004026909.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181126|gb|ADQ41296.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 207 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 8/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 61 MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIKI------AGKTDRLDLEDFEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 ++ +RC +++ S + V +L Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197 >gi|16760076|ref|NP_455693.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764555|ref|NP_460170.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142153|ref|NP_805495.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167553642|ref|ZP_02347390.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992017|ref|ZP_02573116.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168239102|ref|ZP_02664160.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194733912|ref|YP_002114205.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197261673|ref|ZP_03161747.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245346|ref|YP_002215938.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204930858|ref|ZP_03221731.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213053423|ref|ZP_03346301.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425024|ref|ZP_03357774.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213579917|ref|ZP_03361743.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612964|ref|ZP_03370790.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646378|ref|ZP_03376431.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|54037702|sp|P65247|KTHY_SALTI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|54041416|sp|P65246|KTHY_SALTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690322|sp|B5FKA7|KTHY_SALDC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238693684|sp|B4TTH0|KTHY_SALSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|25288292|pir||AI0642 dTMP kinase (EC 2.7.4.9) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419717|gb|AAL20129.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502370|emb|CAD08324.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137782|gb|AAO69344.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194709414|gb|ACF88635.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197239928|gb|EDY22548.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288135|gb|EDY27522.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939862|gb|ACH77195.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320317|gb|EDZ05521.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205321974|gb|EDZ09813.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329725|gb|EDZ16489.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246412|emb|CBG24221.1| dTMP kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992975|gb|ACY87860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157741|emb|CBW17233.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912188|dbj|BAJ36162.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223815|gb|EFX48878.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129469|gb|ADX16899.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623686|gb|EGE30031.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 213 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 15/218 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A Q R +D+ +V +I V + VQ++ + Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|119775178|ref|YP_927918.1| thymidylate kinase [Shewanella amazonensis SB2B] gi|166223115|sp|A1S792|KTHY_SHEAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|119767678|gb|ABM00249.1| thymidylate kinase [Shewanella amazonensis SB2B] Length = 208 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 110/206 (53%), Gaps = 10/206 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSC-GV 59 N G FI EG+EGAGK++ I+L+ F+++ V TREPGGTP AE R ++ + Sbjct: 4 NPGKFIVIEGLEGAGKSSAITLVHDFIEKHTGMAPVCTREPGGTPLAEKIRDLVKNAEPG 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++F AAR V NVI+P+L G+ +L DR SS AYQG L + + Sbjct: 64 DPLCDEAECLLFYAARAQLVANVIKPSLASGRWVLGDRHNLSSIAYQGGGRGLMSL-VKT 122 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ PD T+ LD+ +GL+R R LD E++++ + R FL Sbjct: 123 ISDATLGGFKPDLTLYLDIDPLLGLERAARR------GALDRIEQQEIDFFHRARATFLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 AR+ ++D++ V +IL Sbjct: 177 QARDD-SSIVVIDASKPLNEVHKDIL 201 >gi|56413814|ref|YP_150889.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179720|ref|YP_216137.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614574|ref|YP_001588539.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168233077|ref|ZP_02658135.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244269|ref|ZP_02669201.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264293|ref|ZP_02686266.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467156|ref|ZP_02700998.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822302|ref|ZP_02834302.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443726|ref|YP_002040454.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450656|ref|YP_002045199.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472980|ref|ZP_03078964.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251767|ref|YP_002146843.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197362737|ref|YP_002142374.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200390972|ref|ZP_03217583.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353065|ref|YP_002226866.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857293|ref|YP_002243944.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584293|ref|YP_002638091.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910980|ref|ZP_04654817.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|73920828|sp|Q5PGT4|KTHY_SALPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|75483993|sp|Q57QF5|KTHY_SALCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030841|sp|A9N5K6|KTHY_SALPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238689910|sp|B5BAH5|KTHY_SALPK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690068|sp|B5F907|KTHY_SALA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690412|sp|B5QXD6|KTHY_SALEP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690500|sp|B5RBA2|KTHY_SALG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690636|sp|B4TFH5|KTHY_SALHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238693599|sp|B4T332|KTHY_SALNS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808304|sp|C0Q792|KTHY_SALPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56128071|gb|AAV77577.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127353|gb|AAX65056.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363938|gb|ABX67706.1| hypothetical protein SPAB_02323 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402389|gb|ACF62611.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408960|gb|ACF69179.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459344|gb|EDX48183.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195630427|gb|EDX49053.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094214|emb|CAR59719.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215470|gb|ACH52867.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|199603417|gb|EDZ01963.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205272846|emb|CAR37773.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205332642|gb|EDZ19406.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336753|gb|EDZ23517.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341244|gb|EDZ28008.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347282|gb|EDZ33913.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709096|emb|CAR33429.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468820|gb|ACN46650.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320086360|emb|CBY96133.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322714190|gb|EFZ05761.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326628144|gb|EGE34487.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 213 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 115/218 (52%), Gaps = 15/218 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGIWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A Q R +D+ +V +I V + VQ++ + Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|222528529|ref|YP_002572411.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725] gi|222455376|gb|ACM59638.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725] Length = 208 Score = 104 bits (260), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 61 MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R+ + + D + +D+ H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRI------KMAGKNDRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 ++ +RC +++ S + V +L Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197 >gi|225874540|ref|YP_002755999.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196] gi|225791865|gb|ACO31955.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196] Length = 219 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 3/218 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G F++FEG++G+GK+T + L ++L+ + V VTR+PGGT + R +LL + Sbjct: 1 MRQGFFLTFEGLDGSGKSTQLRRLAQWLEARGESVVVTRQPGGTRIGDGIRALLLDSRTE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE + R + VIRPAL GKI+LCDR+ DS+ AYQG + +L Sbjct: 61 SISPMAELGFMFSDRAQSIAEVIRPALDAGKIVLCDRYTDSTEAYQGGGRQLGSELVRNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ + PD T++L L+R + R + RE FE+++ + + + + Sbjct: 121 HQVMCGGLDPDLTLLLLPDFARSLERARRRNGRVAAREGKDEGRFEQENEIFYRRVFDQY 180 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IAR +P R ++S +S+ +I++IV E + +R Sbjct: 181 GEIARREPLRVVAIESDEGIESIHQHIVHIVEERLARR 218 >gi|297563869|ref|YP_003682842.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848318|gb|ADH70336.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 707 Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 14/194 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI EG EGAGK+T + L +L+ + ++V TR+PG T R +LL Sbjct: 480 AGAFIVVEGGEGAGKSTQVRELTVWLRDQGFEVIGTRQPGATKLGMRLRGLLLDRENSHI 539 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++AA + DHV+ I PAL G +++ DR++DS AYQG S + L D ++ Sbjct: 540 TPRAEVLLYAADKADHVQQEILPALRRGAVVISDRYVDSLLAYQG---SGRDLSSDEIRR 596 Query: 123 IS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 IS Q ++PD T++LD+ + GL R+ D E + H++ R+ FL+ Sbjct: 597 ISDWATQGLVPDLTVLLDVRPEDGLSRL--------GGPADRIEGEPAEFHDRVRRGFLE 648 Query: 180 IARNQPDRCHIVDS 193 +AR P+R ++D+ Sbjct: 649 LARAAPERYLVLDA 662 >gi|198283696|ref|YP_002220017.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667539|ref|YP_002426325.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248217|gb|ACH83810.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519752|gb|ACK80338.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 214 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG F++ EGIEGAGK++ + +L ++ Y V VTREPGG P EA R + L + Sbjct: 7 KSGFFLTLEGIEGAGKSSALPVLAELCHQQGYAVEVTREPGGGPLGEALRTIFLDDSLHL 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +++ A R +H I PAL GK+++ DR+ DS+YAYQ + +L Sbjct: 67 DADEELLLLY-AGRRNHWRTRIAPALAAGKVVISDRYEDSTYAYQSGGRGVPPAHIAALA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T D+ ++G R++ R D E++D + R +F + Sbjct: 126 RWAGITRRPDLTFWFDIAPELGAARIRMRRP-------DRLEQEDQAFFRRARAVFAERC 178 Query: 182 RNQPDRCHIVDSA 194 +P R VD++ Sbjct: 179 AAEPQRIWRVDAS 191 >gi|260773142|ref|ZP_05882058.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14] gi|260612281|gb|EEX37484.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14] Length = 211 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 109/201 (54%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG+EGAGK+T I ++ LQ + + TREPGGT AE R ++ E Sbjct: 5 FIVVEGLEGAGKSTAIQVVIDTLQAFGIESITQTREPGGTVLAEKMRALVKEDHPGEVLQ 64 Query: 65 E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR+ VENVI+PAL G ++ DR SS AYQG + L+++ Sbjct: 65 DVTEVLLMYAARVQLVENVIKPALAAGCWVVGDRHDMSSQAYQGGGRQISPATMQQLKQL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T+ LD+ +GL+R + R LD ER D+ E+ RQ +L++A++ Sbjct: 125 ALGAFSPDFTLYLDIDPRVGLERARGR------GELDRIERMDLSFFERTRQRYLELAKD 178 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 P I+++ + Q+V +I Sbjct: 179 NPS-VTIINAQQTLQAVTQDI 198 >gi|157804070|ref|YP_001492619.1| thymidylate kinase [Rickettsia canadensis str. McKiel] gi|166223111|sp|A8EZQ1|KTHY_RICCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157785333|gb|ABV73834.1| thymidylate kinase [Rickettsia canadensis str. McKiel] Length = 203 Score = 104 bits (259), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 105/194 (54%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG+GK+T +L +L+ +N V +TRE GGT +E R +L+ + Sbjct: 4 LTQGKFITFEGGEGSGKSTQSQMLYEYLKSQNTPVILTREVGGTIVSEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I P L EG I++CDRFLDS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMVRKIIPVLKEGYIVICDRFLDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +LR + + F+ + + + K F ++ Sbjct: 121 HKTLMPPLMPDITFFIDVEPDTAIKRV----NLRNMS--NKFDIRGIDFYNKIYDCFKEL 174 Query: 181 ARNQPDRCHIVDSA 194 + P R + ++ Sbjct: 175 SNRFPARIKTIKAS 188 >gi|240047504|ref|YP_002960892.1| Thymidylate kinase [Mycoplasma conjunctivae HRC/581] gi|239985076|emb|CAT05069.1| Thymidylate kinase [Mycoplasma conjunctivae] Length = 209 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 9/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FI+FEGI+G GKTT ++L ++LQ+K ++ VTREPGGT EA R + L D Sbjct: 1 MFITFEGIDGCGKTTVLNLFAKYLQKKFPTREIIVTREPGGTGVVEAEKVREIALDRNHD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E ++ A +R H+E +I PAL E KI+LCDR++DSS AYQG + + Sbjct: 61 -ISPYSEMLLMATSRRMHLEKLIWPALKENKIILCDRYIDSSIAYQGFGLQLGEQLVSMV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T +D+ + +R+ + + D E + + + + F + Sbjct: 120 NNLISNNTKPDITFFIDVEPKVAFERMSQIINHKR----DRLEIRGRQFYLRVIEGFNFV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 A+ +P+ + + + V N++N+ Sbjct: 176 AKQRPNNFFKISGNNQPEEVLANVINV 202 >gi|312601234|gb|ADQ90489.1| Thymidylate kinase [Mycoplasma hyopneumoniae 168] Length = 211 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/169 (38%), Positives = 97/169 (57%), Gaps = 11/169 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K ++ T EPGG EA R LLS + Sbjct: 1 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALLIREFLLSKN-N 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 60 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119 Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164 + + PD TI LD+ + +G+ R NR L E+ ++++ER Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERMGIFRDHNRDRL-ENKGVEFYER 167 >gi|1246364|gb|AAA93513.1| thymidylate:zeocin resistance protein:NDP kinase fusion protein [Cloning vector pZEO-SG4] Length = 494 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/216 (35%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 6 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 66 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 124 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 125 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A Q H +D+ ++V I V V++ Sbjct: 177 ELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 211 >gi|148377947|ref|YP_001256823.1| thymidylate kinase [Mycoplasma agalactiae PG2] gi|229621732|sp|A5IZC6|KTHY_MYCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148291993|emb|CAL59385.1| Thymidylate kinase [Mycoplasma agalactiae PG2] Length = 215 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 67/206 (32%), Positives = 110/206 (53%), Gaps = 12/206 (5%) Query: 5 LFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT + L+++ L++K VTREPGG +E R ++L Sbjct: 1 MFITFEGLDGSGKTTIVQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILDKE-S 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +EA+++ A+R H+E VI PAL E K++LCDR++DS YAYQG F L Sbjct: 60 RLSPISEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179 E+ ++ +PD TI +D+ + Q+ Y S + D + + + H+K + + Sbjct: 120 TEMVIESTIPDITIFIDITAE------QSEYRRNVSRLISDRLDSESLEFHKKVFDAYKE 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 + P R IV+ S + I+ Sbjct: 174 VINLDPKRFIIVNGLQSIPEILDEIV 199 >gi|237653168|ref|YP_002889482.1| thymidylate kinase [Thauera sp. MZ1T] gi|237624415|gb|ACR01105.1| thymidylate kinase [Thauera sp. MZ1T] Length = 233 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 10/208 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK++ I+ + LQ DV TREPGGT E R +LL + Sbjct: 31 GRFITFEGIDGAGKSSQIAAVVALLQAAGRDVDQTREPGGTALGERLRELLLH---EPMH 87 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 E EA++ AAR +H+ I PAL G+ ++CDRF D+++AYQ G R + F D+L+ Sbjct: 88 LETEAMLMFAARREHLAARIEPALAAGRWVVCDRFSDATFAYQVGGRGLDRAKF-DALEA 146 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++ DL + RV + D FER+ E+ R +L+ AR Sbjct: 147 WVHPGLQPDLTLVFDLDPALAAARVAS-----TGVDPDRFEREQRDFFERVRAAYLERAR 201 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R ++D+A S +++ +I +V E Sbjct: 202 LAPLRICVIDAARSPEAIRADIERVVRE 229 >gi|57234426|ref|YP_181510.1| thymidylate kinase [Dehalococcoides ethenogenes 195] gi|123618736|sp|Q3Z8D9|KTHY_DEHE1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|57224874|gb|AAW39931.1| thymidylate kinase [Dehalococcoides ethenogenes 195] Length = 207 Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/192 (32%), Positives = 102/192 (53%), Gaps = 7/192 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++ +T EPGGT + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGTRSGDKITRLLKWSEEENISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A+R ++NVI+PAL++G I++CDR+ DS+ AYQG + + + ++ Sbjct: 63 LAELFLFNASRSILIDNVIKPALLDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD TI LD+ L R + D FE ++ H++ R F IA + Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175 Query: 185 PDRCHIVDSAHS 196 P+R +D++ S Sbjct: 176 PNRFLKLDASLS 187 >gi|221195667|ref|ZP_03568721.1| thymidylate kinase [Atopobium rimae ATCC 49626] gi|221184433|gb|EEE16826.1| thymidylate kinase [Atopobium rimae ATCC 49626] Length = 239 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 7/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EGI+G GK+T LL L + + ++ REPGGT +E R +LL + Sbjct: 20 GLFITLEGIDGVGKSTQADLLAEALMQTDKELVRLREPGGTAISEKIRALLLDASNTDMA 79 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E +++ A+R V VI PAL G I+LCDRF DS++AYQ + ++ Sbjct: 80 DECELLLYEASRAQLVRQVIEPALARGAIVLCDRFYDSTFAYQAGGRGIDEKVVRRANDL 139 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V+P T+I DL +R + D E + R+ ++ ++ Sbjct: 140 GSCGVVPTRTLIFDLEPAEAFQRATTNGA-------DRMEAEGAAFQRCVREAYIRLSVA 192 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R H+V + + V + + +LV Sbjct: 193 EPSRVHVVSAYGTIAEVHARTVADLCDLV 221 >gi|256545293|ref|ZP_05472657.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170] gi|256398974|gb|EEU12587.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170] Length = 209 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 112/216 (51%), Gaps = 12/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GL I FEG +G+GKTT + + L YD++ REPGGT +E R ++L E Sbjct: 2 NGLLIVFEGPDGSGKTTVLEKVYNKLLEDGYDIYKFREPGGTDISEKIREIILDNENIEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA+R V +RP L +G I+LCDRF+ SS YQG + L +D ++ Sbjct: 62 NPRCEALLYAASRAQLVGEKLRPLLEKGSIILCDRFVLSSMLYQG---IGRGLGVDEVKN 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 I ++ E+ D T+ L++ + R R++ D E +D H+K +++ Sbjct: 119 INDFAIGEIRADLTLFLNIDYKTAIDRK------RKNFISDRLENEDDSFHKKTYDGYIE 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +++ D +D+ S +V N L + ++++ Sbjct: 173 LSKRFKDEIISIDANKSIDTVVDNCLATIKTYLKEK 208 >gi|213054494|gb|ACJ39423.1| thymidine monophospho kinase [Staphylococcus aureus] gi|213054496|gb|ACJ39424.1| thymidine monophospho kinase [Staphylococcus aureus] Length = 176 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 57/170 (33%), Positives = 99/170 (58%), Gaps = 7/170 (4%) Query: 31 KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG 90 K+YDV +TREPGG P E R ++L ++ EA++FAA+R +H+ + PAL EG Sbjct: 12 KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIRTEAMLFAASRREHLVLKVIPALKEG 69 Query: 91 KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 K++LCDR++DSS AYQG + +L E ++ + PD TI L++ ++G +R+ Sbjct: 70 KVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERI--- 126 Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200 ++ S + +++D+ HEK + + +I N+ R V++ ++V Sbjct: 127 --IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENV 174 >gi|308186414|ref|YP_003930545.1| Thymidylate kinase [Pantoea vagans C9-1] gi|308056924|gb|ADO09096.1| Thymidylate kinase [Pantoea vagans C9-1] Length = 210 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/207 (35%), Positives = 110/207 (53%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT +++ R D+ TREPGGTP AE R VL+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDAIVATLHARGISDLVFTREPGGTPLAEQLR-VLVKQGI 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 59 EGEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSGLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +L++ + + PD T+ LD+ +IGL+R + R LD E++ + E+ R + Sbjct: 119 QTLRDAVLGDFRPDLTLYLDVTPEIGLQRARAR------GELDRIEQESLRFFERTRARY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 L +A P +D+ S V ++ Sbjct: 173 LTLAAEDPT-ILTIDATQSLTEVTASL 198 >gi|42522597|ref|NP_967977.1| hypothetical protein Bd1040 [Bdellovibrio bacteriovorus HD100] gi|59798302|sp|Q6MP28|KTHY_BDEBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|39575129|emb|CAE78970.1| tmk [Bdellovibrio bacteriovorus HD100] Length = 214 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 65/205 (31%), Positives = 106/205 (51%), Gaps = 1/205 (0%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEG++G+GK++ ++ L+R LQ + + TREPGGTP + R+++L Sbjct: 7 FIVFEGLDGSGKSSLMAALERELQNRAINFLRTREPGGTPLGDEIRNMILRKEGPAPTPR 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +++ A+R HV+ VIRPAL G +LCDRF SS A+Q + + L + Sbjct: 67 TELLLYEASRSQHVDQVIRPALAAGTWVLCDRFAASSVAFQSGGRAISEADVVMLNTFAT 126 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + D T++LDL V+ +R Q R ++ D E + HE RQ FL +R Sbjct: 127 GGLKADITVLLDLSVEESRRRRQGRGAV-TGETEDRIESEADTFHENVRQSFLKQSREDA 185 Query: 186 DRCHIVDSAHSFQSVATNILNIVWE 210 ++D+ + + + +L + E Sbjct: 186 AAWIVLDARETPEVLFKQLLQSLTE 210 >gi|283833607|ref|ZP_06353348.1| dTMP kinase [Citrobacter youngae ATCC 29220] gi|291071290|gb|EFE09399.1| dTMP kinase [Citrobacter youngae ATCC 29220] Length = 213 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 113/216 (52%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALARGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD TI LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A +D+ ++V +I N + V+++ Sbjct: 177 LAAKDAS-IRTIDATQPLEAVMADIRNTITRWVKEQ 211 >gi|299143254|ref|ZP_07036334.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517739|gb|EFI41478.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 203 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 10/210 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F++FEG +G GK+T +L+ L + YDV TREPGGT +E R+++L E Sbjct: 3 GIFVTFEGPDGCGKSTIANLVYEKL-KAEYDVVKTREPGGTKISEKIRNIILDNENIEMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA+++AA+R HVE I PAL G I+LC+RF+ SS AYQG ++++ + Sbjct: 62 SRTEALLYAASRAQHVEEKILPALKNGSIVLCERFVLSSIAYQGFGRGLGRESIENINKF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + EV PD + D R R C + F H + ++ + ++A+ Sbjct: 122 ATGEVEPDVVFLFDTGNISSENRKLEFGGDRIEICGNEF-------HSRVKEAYRELAKE 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + ++D+ + V + L+I+++ ++ Sbjct: 175 K--KYCVIDATRGIEEVLNDCLDILYKKLE 202 >gi|312971234|ref|ZP_07785412.1| thymidylate kinase [Escherichia coli 1827-70] gi|310336436|gb|EFQ01622.1| thymidylate kinase [Escherichia coli 1827-70] Length = 213 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + H +D+ ++V I V V++ Sbjct: 176 ELA-AKDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|1246361|gb|AAA93511.1| thymidine:thymidylate kinase:zeocin resistance fusion protein [Cloning vector pZEO-SG3] Length = 560 Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 77/221 (34%), Positives = 117/221 (52%), Gaps = 17/221 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---S 56 M +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S Sbjct: 215 MARSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 274 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHL 115 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ Sbjct: 275 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 334 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKR 173 L +L++ + + PD T+ LD+ ++GLKR + R L E D+F R Sbjct: 335 -LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT-------- 385 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R +L++A Q H +D+ ++V I V V++ Sbjct: 386 RARYLELA-AQDKSIHTIDATQPLEAVMDAIRTTVTHWVKE 425 >gi|322616575|gb|EFY13484.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619910|gb|EFY16784.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622478|gb|EFY19323.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629405|gb|EFY26182.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633924|gb|EFY30662.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636854|gb|EFY33557.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641346|gb|EFY37985.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645110|gb|EFY41639.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652275|gb|EFY48631.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655626|gb|EFY51928.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660931|gb|EFY57161.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665484|gb|EFY61672.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667539|gb|EFY63700.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673666|gb|EFY69768.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677592|gb|EFY73656.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679743|gb|EFY75782.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687215|gb|EFY83187.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194002|gb|EFZ79203.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199411|gb|EFZ84504.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202426|gb|EFZ87468.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208861|gb|EFZ93799.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213786|gb|EFZ98566.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217835|gb|EGA02550.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221677|gb|EGA06089.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224737|gb|EGA09005.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229637|gb|EGA13760.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232862|gb|EGA16958.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240102|gb|EGA24146.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242911|gb|EGA26932.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246826|gb|EGA30796.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252039|gb|EGA35901.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255540|gb|EGA39299.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261608|gb|EGA45185.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266968|gb|EGA50453.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272072|gb|EGA55486.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 213 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/218 (33%), Positives = 115/218 (52%), Gaps = 15/218 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L + G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRAVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A Q R +D+ +V +I V + VQ++ + Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|71279228|ref|YP_269022.1| thymidylate kinase [Colwellia psychrerythraea 34H] gi|123632593|sp|Q482J5|KTHY_COLP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71144968|gb|AAZ25441.1| thymidylate kinase [Colwellia psychrerythraea 34H] Length = 212 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++G FI EG+EGAGK++ I++++ L + + TREPGGTP AE+ R ++ S Sbjct: 1 MSTGKFIVIEGMEGAGKSSAIAVIESTLNKHGIEYINTREPGGTPLAESLRDMVKSVDHQ 60 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E E E ++ A+R + N I PAL GK ++ DR SS AYQG +++ Sbjct: 61 EKLTVETELLLMYASRSQLLANKILPALAAGKWVIGDRHDLSSRAYQGGGRGFDETIMNT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIF 177 + +I+++ PD T+ LD+ IGL R + R L E +++F R +H K R++ Sbjct: 121 ISDITLKGFRPDITLYLDIDPHIGLSRAKARGDLDRIELEKMEFFIR----VHNKYREL- 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 Q D VD+A + V ++ Sbjct: 176 ----AEQDDSIITVDAAQAMLKVHQDV 198 >gi|332141143|ref|YP_004426881.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693284|sp|B4S1N2|KTHY_ALTMD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|327551165|gb|AEA97883.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype'] Length = 222 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 11/215 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGK++ I L+ + L V TREPGGTP AEA R + + Sbjct: 3 GKFIVVEGLEGAGKSSVIGLIVKALTDAGMRVEQTREPGGTPMAEAIRECVKHDWDETVS 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++ AAR+ + N I P+L G ++ DR SS AYQG + ++ +I Sbjct: 63 EETELLLMYAARVQLLTNKIYPSLNAGAWVVGDRHDLSSQAYQGGGRGVSEKTMTAISDI 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+ LD+ +GL+R + R L E A L +FER R +L +A Sbjct: 123 ALNGFKPDLTLYLDVDPAVGLERARGRGELDRIEQAGLGFFERT--------RARYLSLA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 N + +V++ + V ++++I+ V + + Sbjct: 175 END-ESIIVVNAMQPMEQVHQDVISIIANYVSQHI 208 >gi|262170995|ref|ZP_06038673.1| thymidylate kinase [Vibrio mimicus MB-451] gi|261892071|gb|EEY38057.1| thymidylate kinase [Vibrio mimicus MB-451] Length = 212 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ L + D + TREPGGT AE R ++ Sbjct: 1 MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + + ++D+A S + V+ +I Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDI 198 >gi|124024915|ref|YP_001014031.1| thymidylate kinase [Prochlorococcus marinus str. NATL1A] gi|166223099|sp|A2BZV6|KTHY_PROM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123959983|gb|ABM74766.1| Thymidylate kinase [Prochlorococcus marinus str. NATL1A] Length = 211 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 6/144 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI FEGI+G+GKTT I+ L ++L +N + +TREPGGT ++ R +LL Sbjct: 3 GKFIVFEGIDGSGKTTQINQLSKWLISTDLIPENNKLVITREPGGTQLGKSIRSLLLDTS 62 Query: 59 VDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +++ + E +++AA R HV +IRP L +G ++ DRF S+ AYQG + Sbjct: 63 IEKSPDSITELLLYAADRSQHVNEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDITLI 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVD 141 L+ I+ Q + PD T +LD+P++ Sbjct: 123 KDLEAIATQGIAPDITFLLDIPIE 146 >gi|254507623|ref|ZP_05119756.1| thymidylate kinase [Vibrio parahaemolyticus 16] gi|219549510|gb|EED26502.1| thymidylate kinase [Vibrio parahaemolyticus 16] Length = 210 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 9/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M+ FI EG+EGAGK+T I+ + L++ + + TREPGGT AE R ++ Sbjct: 1 MSQAKFIVIEGLEGAGKSTAINAVMETLKQAGVERIKNTREPGGTVLAEKLRTLVKQEHD 60 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 61 GEILQDMTELLLMYAARVQLVENVIKPALESGTWVVGDRHDMSSQAYQGGGRQIAKETMA 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD TI LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 SLKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A N + +V++ + VA +I Sbjct: 175 EMA-NADESVMVVNAEQTIDKVAADI 199 >gi|218549175|ref|YP_002382966.1| thymidylate kinase [Escherichia fergusonii ATCC 35469] gi|226732661|sp|B7LT40|KTHY_ESCF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218356716|emb|CAQ89344.1| thymidylate kinase [Escherichia fergusonii ATCC 35469] gi|324113893|gb|EGC07867.1| thymidylate kinase [Escherichia fergusonii B253] gi|325497596|gb|EGC95455.1| thymidylate kinase [Escherichia fergusonii ECD227] Length = 213 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ ++ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIREMIFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITEKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGVDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A Q +D+ S + V +I V V+++ Sbjct: 177 LA-AQDASIRTIDATQSLECVMADIRQTVTTWVKEQ 211 >gi|302871135|ref|YP_003839771.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47] gi|302573994|gb|ADL41785.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47] Length = 210 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLFKVEKYLKDKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 61 MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSIVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ 148 I ++ PD I+L L +I ++R+Q Sbjct: 120 NSIFEDKIKPDLYIVLTLEPEIAIQRIQ 147 >gi|323175251|gb|EFZ60864.1| thymidylate kinase [Escherichia coli LT-68] Length = 213 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/216 (34%), Positives = 115/216 (53%), Gaps = 17/216 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 +AE ++F AAR+ +E VI+PAL G ++ DR S+ AYQ G R QH+ L +L Sbjct: 65 ITDKAEVLMFYAARVQLIETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM-LATL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 ++ + + PD T+ LD+ ++GLKR + R L E D+F R R +L Sbjct: 124 RDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A H +D+ ++V I V V++ Sbjct: 176 ELAAKDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|260899207|ref|ZP_05907602.1| dTMP kinase [Vibrio parahaemolyticus AQ4037] gi|308108494|gb|EFO46034.1| dTMP kinase [Vibrio parahaemolyticus AQ4037] Length = 209 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++L Q ++ TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQINASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P ++++ S + V+ +I + + E + ++ Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209 >gi|312128360|ref|YP_003993234.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] gi|311778379|gb|ADQ07865.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] Length = 210 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 8/204 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GK+T I ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKSTQIVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 61 MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D+ H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIKM------AGKNDRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ +RC +++ S + V + Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKV 196 >gi|311279996|ref|YP_003942227.1| thymidylate kinase [Enterobacter cloacae SCF1] gi|308749191|gb|ADO48943.1| thymidylate kinase [Enterobacter cloacae SCF1] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 11/214 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQMGIRDLLFTREPGGTILAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL GK ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDPQMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ ++GL R + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLGRARAR------GDLDRIEQESLNFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 Q H +D+ V I + V VQ++ Sbjct: 179 -AQDASIHTIDATQPLDDVMRAIRDTVTRWVQEQ 211 >gi|237731030|ref|ZP_04561511.1| thymidylate kinase [Citrobacter sp. 30_2] gi|226906569|gb|EEH92487.1| thymidylate kinase [Citrobacter sp. 30_2] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 15/216 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAKGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + + PD TI LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARARGELDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A +D+ ++V +I + + + V+++ Sbjct: 177 LAAKDTS-IRTIDATQPLEAVMADIRHTITQWVKEQ 211 >gi|213864741|ref|ZP_03386860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 213 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 15/218 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + + PD T+ LD+ ++GLKR + R L E D+F R R +L+ Sbjct: 125 DAVLGVFSPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A Q R +D+ +V +I V + VQ++ + Sbjct: 177 LA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|270308091|ref|YP_003330149.1| thymidylate kinase [Dehalococcoides sp. VS] gi|270153983|gb|ACZ61821.1| thymidylate kinase [Dehalococcoides sp. VS] Length = 207 Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 10/212 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++ + +T EPGGT + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKLGLECVLTHEPGGTRSGDKITRLLKWSKEENISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A+R ++NVI+PAL +G I++CDR+ DS+ AYQG + + + ++ Sbjct: 63 LTELLLFNASRSILIDNVIKPALQDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD TI LD+ L R + D FE ++ H++ R F IA + Sbjct: 123 NGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175 Query: 185 PDRCHIVDSAHSFQSVATNI---LNIVWELVQ 213 P+R +D++ +A I +N++ +L Q Sbjct: 176 PNRFLKLDASLPQSELARCIRQRVNVLLKLPQ 207 >gi|239916913|ref|YP_002956471.1| thymidylate kinase [Micrococcus luteus NCTC 2665] gi|281414632|ref|ZP_06246374.1| thymidylate kinase [Micrococcus luteus NCTC 2665] gi|239838120|gb|ACS29917.1| thymidylate kinase [Micrococcus luteus NCTC 2665] Length = 219 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 1/205 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG +G+GK+T L L+ ++V +TREPGG+ E R +LL Sbjct: 9 GLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPEHAPVD 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAAAR H +RPAL G +++ DR++DSS AYQG + +L E Sbjct: 69 PRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALNEW 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD T+++D+ R R + E A D ER+ HE R FL A Sbjct: 129 ATDGLVPDLTVLIDVDAATAADRRDRRAAGGEGAP-DRMERETADRHEALRAAFLARAAA 187 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++D A Q + L V Sbjct: 188 APERYLVLDGALPPQELTARALARV 212 >gi|28898823|ref|NP_798428.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633] gi|260879164|ref|ZP_05891519.1| dTMP kinase [Vibrio parahaemolyticus AN-5034] gi|31340183|sp|Q87N26|KTHY_VIBPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28807042|dbj|BAC60312.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633] gi|308093561|gb|EFO43256.1| dTMP kinase [Vibrio parahaemolyticus AN-5034] Length = 210 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++L Q ++ TREPGGTP AE R ++ +E Sbjct: 6 FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 66 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 126 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P ++++ S + V+ +I + + E + ++ Sbjct: 180 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 210 >gi|312623182|ref|YP_004024795.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002] gi|312203649|gb|ADQ46976.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002] Length = 208 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/205 (33%), Positives = 107/205 (52%), Gaps = 8/205 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 61 MDGL-TEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R+ + + D + +D+ H F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRI------KMAGKNDKLDLEDLEFHRLVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 ++ +RC +++ S + V +L Sbjct: 174 SK-WFERCVNIEAQGSEKEVFEKVL 197 >gi|153838848|ref|ZP_01991515.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810] gi|308095583|ref|ZP_05906946.2| dTMP kinase [Vibrio parahaemolyticus Peru-466] gi|308125924|ref|ZP_05778121.2| dTMP kinase [Vibrio parahaemolyticus K5030] gi|149747732|gb|EDM58632.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810] gi|308089015|gb|EFO38710.1| dTMP kinase [Vibrio parahaemolyticus Peru-466] gi|308114687|gb|EFO52227.1| dTMP kinase [Vibrio parahaemolyticus K5030] Length = 209 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++L Q ++ TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P ++++ S + V+ +I + + E + ++ Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209 >gi|13507745|ref|NP_109694.1| thymidylate kinase [Mycoplasma pneumoniae M129] gi|2497578|sp|P75106|KTHY_MYCPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1673808|gb|AAB95796.1| thymidylate kinase [Mycoplasma pneumoniae M129] gi|301633244|gb|ADK86798.1| dTMP kinase [Mycoplasma pneumoniae FH] Length = 210 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 59/152 (38%), Positives = 87/152 (57%), Gaps = 5/152 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK-RFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G+F++ EG++GAGKT + K RF Q + +REPGGTP AE R +LL Sbjct: 1 MKQGVFVAIEGVDGAGKTVLLEAFKQRFPQSFLGFKTLFSREPGGTPLAEKIRALLLHEA 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ EA +FAA+R +HV +I+PAL + ++++ DRF+ SSYAYQG + Sbjct: 61 MEPL---TEAYLFAASRTEHVRQLIQPALQQKQLVIVDRFVWSSYAYQGLIKKVGLDVVK 117 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 L +V + MPD T I+D + L R+ R Sbjct: 118 KLNADAVGDSMPDFTFIVDCDFETALNRMAKR 149 >gi|269114872|ref|YP_003302635.1| thymidylate kinase (dTMP kinase) [Mycoplasma hominis] gi|268322497|emb|CAX37232.1| Thymidylate kinase (dTMP kinase) [Mycoplasma hominis ATCC 23114] Length = 213 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 113/214 (52%), Gaps = 9/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAA--RHVLLS 56 M+ G F+ FEG++G+GKTT I LK +L+ KN D TREPG + + EA R ++L Sbjct: 1 MSKGKFVVFEGMDGSGKTTIIKKLKEYLESKNRLDDFVFTREPGSSHSKEAEEIRQLILD 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + F +A++FAA+R ++E + P L + K ++ DR+ SS+ YQG Sbjct: 61 ND-NSFSVMVDALLFAASRRLNLEKCVWPGLKKNKTVISDRYWTSSFVYQGVLGGLGLKK 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + I+ +E PD TI D+ ++ ++R+ +R++ D E +V ++K R Sbjct: 120 VKDINNIATEETTPDLTIFFDMEPELSVERIT---QIRKTKT-DRLESTNVEYYKKLRDS 175 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + ++ I+ S + + +LN++ E Sbjct: 176 YWYVINQGNEKYEIIKSDCNIDELFKRVLNVLKE 209 >gi|187251864|ref|YP_001876346.1| thymidylate kinase [Elusimicrobium minutum Pei191] gi|186972024|gb|ACC99009.1| Thymidylate kinase [Elusimicrobium minutum Pei191] Length = 203 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 9/206 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEG + GK+T +LL+++L+ Y+V TREPGGTP +E R +LL + Sbjct: 4 FIVFEGPDRGGKSTQANLLRKYLEAAGYNVLQTREPGGTPVSEGIRKILLDP-ENSVSPR 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE +++ A+R H E I PAL E KI++C+R+ S+ AYQG ++++ I+ Sbjct: 63 AELLLYEASRAQHTEEKILPALQEDKIVICERYTMSTCAYQGYGRGFDMDLINTVNNIAT 122 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T + + +R + +S D E + EK RQ + ++ + P Sbjct: 123 HGLQPDLTFVFLMSDKYFTERGEYLFS-------DRLELEGNEFREKMRQGYKELVKITP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211 + ++D+ ++ + + +L + E Sbjct: 176 NAV-LIDADNTVEEIHAKVLGHLKEF 200 >gi|72383332|ref|YP_292687.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A] gi|123620515|sp|Q46HP4|KTHY_PROMT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72003182|gb|AAZ58984.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A] Length = 211 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/144 (36%), Positives = 85/144 (59%), Gaps = 6/144 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI FEGI+G+GKTT I+ L ++L +N + +TREPGGT ++ R +LL Sbjct: 3 GKFIVFEGIDGSGKTTQINQLSKWLISSDLIPENNKLVITREPGGTKLGKSIRSLLLDTS 62 Query: 59 VDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +++ + E +++AA R H+ +IRP L +G ++ DRF S+ AYQG + Sbjct: 63 IEKSPDSITELLLYAADRSQHINEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDINLI 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVD 141 L+ I+ Q + PD T +LD+P++ Sbjct: 123 KDLEAIATQGIAPDITFLLDIPIE 146 >gi|259908791|ref|YP_002649147.1| thymidylate kinase [Erwinia pyrifoliae Ep1/96] gi|224964413|emb|CAX55922.1| Thymidylate kinase (DTMP kinase) [Erwinia pyrifoliae Ep1/96] gi|283478770|emb|CAY74686.1| tmk [Erwinia pyrifoliae DSM 12163] Length = 210 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + LQR D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDAVVSELQRHGINDIVFTREPGGTPLAEKLRD-LIKQGI 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 EGERVTNSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMNSDLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L++ + + PD T+ LD+ IGL+R + R LD E++ + + R+ + Sbjct: 119 NCLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L +A + R +D+ + V + + + +Q++ Sbjct: 173 LALA-SADSRIKTIDATRPLEQVTAALQQTLNQWLQEQ 209 >gi|262166120|ref|ZP_06033857.1| thymidylate kinase [Vibrio mimicus VM223] gi|262025836|gb|EEY44504.1| thymidylate kinase [Vibrio mimicus VM223] Length = 212 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 114/206 (55%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ L + + + TREPGGT AE R ++ Sbjct: 1 MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTALAEKLRALVKEDHP 59 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIASSTMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ DV E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDVSFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + + ++D+A S + V+ +I Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDI 198 >gi|73748588|ref|YP_307827.1| thymidylate kinase [Dehalococcoides sp. CBDB1] gi|289432614|ref|YP_003462487.1| thymidylate kinase [Dehalococcoides sp. GT] gi|123619641|sp|Q3ZXD8|KTHY_DEHSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73660304|emb|CAI82911.1| thymidylate kinase [Dehalococcoides sp. CBDB1] gi|288946334|gb|ADC74031.1| thymidylate kinase [Dehalococcoides sp. GT] Length = 208 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 13/193 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++ +T EPGG+ + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121 E ++F A+R ++NVI+PAL +GKI++CDR+ DS+ AYQG + L LD+++ Sbjct: 63 LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQG---YGRGLDLDTVKCVN 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++PD TI LD+ L R + D FE ++ H++ R F I Sbjct: 120 SLASGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIY 172 Query: 182 RNQPDRCHIVDSA 194 +PDR +D++ Sbjct: 173 ATEPDRFLKLDAS 185 >gi|159040886|ref|YP_001540138.1| dTMP kinase [Caldivirga maquilingensis IC-167] gi|254808282|sp|A8MB58|KTHY_CALMQ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|157919721|gb|ABW01148.1| dTMP kinase [Caldivirga maquilingensis IC-167] Length = 205 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 65/206 (31%), Positives = 112/206 (54%), Gaps = 18/206 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+ EGI+G GK+T I L L+R+ Y V+ T EP +P R +L + E Sbjct: 3 IFVDVEGIDGVGKSTVIRLTADELRRRGYLVYTTSEPSDSPIGLFIRRSILESNL-EVEP 61 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A++FAA R+ H VI+P + EG I++ +R+++SS AYQG SQ + ++ + E++ Sbjct: 62 MALALLFAADRVIHYNRVIKPKVKEGYIVITERYIESSVAYQG----SQGVPVEWIIEVN 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA--R 182 PD I+L+ P++ R+ NR L+YFER + ++++L A R Sbjct: 118 SMVAEPDLVIVLNAPLNTVASRLSNR------GMLEYFERNTDFLRSV-QEVYLRRARER 170 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N P ++D++ +V ++L ++ Sbjct: 171 NYP----VIDASRVINNVVNDVLTLI 192 >gi|258625441|ref|ZP_05720334.1| thymidylate kinase [Vibrio mimicus VM603] gi|258582245|gb|EEW07101.1| thymidylate kinase [Vibrio mimicus VM603] Length = 212 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 71/206 (34%), Positives = 113/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ L + D + TREPGGT AE R ++ Sbjct: 1 MNAK-FIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ D E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDTSFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + + ++D+A S + V+ +I Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDI 198 >gi|238920255|ref|YP_002933770.1| thymidylate kinase [Edwardsiella ictaluri 93-146] gi|259494269|sp|C5B8G5|KTHY_EDWI9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238869824|gb|ACR69535.1| thymidylate kinase, putative [Edwardsiella ictaluri 93-146] Length = 213 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/180 (40%), Positives = 101/180 (56%), Gaps = 12/180 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT ++ L+R +V TREPGGTP AE R L+ GVD Sbjct: 5 FIVIEGLEGAGKTTARDVVVDELRRHGIPEVVFTREPGGTPLAEHLR-TLVKEGVDGETL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 AE ++ AAR+ VENVI+PAL G ++ DR SS AYQ G R HL + +L+ Sbjct: 64 TDRAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHL-MQTLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+P GL+R ++R LD ER+ + E+ R +L +A Sbjct: 123 DTVLGDFKPDLTLYLDIPPQQGLERARSR------GELDRIERESLAFFERTRARYLALA 176 >gi|71893607|ref|YP_279053.1| thymidylate kinase [Mycoplasma hyopneumoniae J] Length = 213 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 11/169 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K ++ T EPGG EA R LLS + Sbjct: 3 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLSKN-N 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 62 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 121 Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164 + + PD TI LD+ + +G+ R NR L E+ ++++E+ Sbjct: 122 NSLISENTFPDLTIFLDIKISKAFERMGIFRDHNRDRL-ENRGVEFYEK 169 >gi|310767311|gb|ADP12261.1| thymidylate kinase [Erwinia sp. Ejp617] Length = 210 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 75/219 (34%), Positives = 113/219 (51%), Gaps = 14/219 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT + LQR D+ TREPGGTP AE R L+ G+ Sbjct: 1 MNSK-FIVIEGLEGAGKTTARDAIVSELQRHGINDIVFTREPGGTPLAEKLRD-LIKQGI 58 Query: 60 D--EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 59 EGERITDSAELLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSLAYQGGGRGMNSDLM 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L++ + + PD T+ LD+ IGL+R + R LD E++ + + R+ + Sbjct: 119 NCLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERY 172 Query: 178 LDIARNQPDRC-HIVDSAHSFQSVATNILNIVWELVQKR 215 L +A D C +D+ + V + + + +Q++ Sbjct: 173 LALA--SADSCIKTIDATRPLEQVTAALQQTLNQWLQEQ 209 >gi|157370153|ref|YP_001478142.1| thymidylate kinase [Serratia proteamaculans 568] gi|166987708|sp|A8GD24|KTHY_SERP5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157321917|gb|ABV41014.1| dTMP kinase [Serratia proteamaculans 568] Length = 212 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 11/213 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63 F+ EG+EGAGKTT + L+ D+ TREPGGTP AE R L GV+ E Sbjct: 5 FVVIEGLEGAGKTTARDTVVDVLREHGINDIAFTREPGGTPLAEKLRD-LFKRGVEGELP 63 Query: 64 A-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + SL++ Sbjct: 64 TIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMASLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + E PD T+ LDLP +GL+R + R LD E++ + E+ R + ++A Sbjct: 124 TVLGEFRPDLTLYLDLPPIVGLQRARAR------GELDRIEQEALPFFERTRARYRELA- 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 Q VD++ S V I V + +Q++ Sbjct: 177 AQDASIITVDASQSLDQVTAAIRRCVSQWLQQQ 209 >gi|116071493|ref|ZP_01468761.1| Thymidylate kinase [Synechococcus sp. BL107] gi|116065116|gb|EAU70874.1| Thymidylate kinase [Synechococcus sp. BL107] Length = 209 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 85/150 (56%), Gaps = 6/150 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 +G FI +GI+G GK+T I L ++L + TREPGGTP ++ R +LL Sbjct: 2 TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTARLVCTREPGGTPLGQSIRELLLHT 61 Query: 58 GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D+ AE +++AA R HV++VIRPAL+ G +L DRF S+ AYQG Sbjct: 62 EADQVPSVTAELLLYAADRAQHVDSVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRPL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + L+ I+ + PD T+ L +PV++ L+R Sbjct: 122 ITRLESIATTGLEPDLTVWLMVPVEVSLQR 151 >gi|293396570|ref|ZP_06640846.1| dTMP kinase [Serratia odorifera DSM 4582] gi|291420834|gb|EFE94087.1| dTMP kinase [Serratia odorifera DSM 4582] Length = 212 Score = 102 bits (255), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 92/168 (54%), Gaps = 5/168 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS F+ EG+EGAGKTT + L++ D+ TREPGGTP AE R + Sbjct: 1 MNSK-FVVIEGLEGAGKTTARDTVVDVLRQHGINDIVFTREPGGTPLAEKLRDLFKRGYQ 59 Query: 60 DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 60 GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQRLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 SL++ + + PD T+ LDLP +GL+R Q R +L E L +FER Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPLVGLQRAQARGALDRIEQEALPFFER 167 >gi|312134417|ref|YP_004001755.1| thymidylate kinase [Caldicellulosiruptor owensensis OL] gi|311774468|gb|ADQ03955.1| thymidylate kinase [Caldicellulosiruptor owensensis OL] Length = 209 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 1/148 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLFKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++ AA R +HV+NV+ PA+ EG I+LCDR++ SS YQG + L Sbjct: 61 MDGL-TEALLLAADRNEHVKNVLIPAMDEGYIVLCDRYILSSVVYQGIVRGVGIENILKL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ 148 I + PD I+L L +I L+R++ Sbjct: 120 NSIFEDRIKPDLYIVLTLDPEIALQRIK 147 >gi|54020350|ref|YP_115634.1| thymidylate kinase [Mycoplasma hyopneumoniae 232] gi|59798155|sp|Q601T1|KTHY_MYCH2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221830|sp|Q4AA79|KTHY_MYCHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53987523|gb|AAV27724.1| thymidylate kinase [Mycoplasma hyopneumoniae 232] gi|144227537|gb|AAZ44342.2| thymidylate kinase [Mycoplasma hyopneumoniae J] Length = 211 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 97/169 (57%), Gaps = 11/169 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K ++ T EPGG EA R LLS + Sbjct: 1 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLSKN-N 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 60 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119 Query: 121 QEISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFER 164 + + PD TI LD+ + +G+ R NR L E+ ++++E+ Sbjct: 120 NSLISENTFPDLTIFLDIKISKAFERMGIFRDHNRDRL-ENRGVEFYEK 167 >gi|25008682|sp|Q8K9J3|KTHY_BUCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 212 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 8/175 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGKT ++R L+ N +V + R+PG TP AE R ++ + +++F Sbjct: 6 FIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTYIEDFE 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++ AAR+ V+ +I+PAL +G ++ DR SS AYQG + ++ L+ + Sbjct: 66 KETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLINKLKYL 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +Q+ +PD TI LD+ +IGLKR R LD E + + +K R +L Sbjct: 126 FLQDFIPDLTIYLDVYPEIGLKRASKRNH------LDRIEHRSLTFFKKTRASYL 174 >gi|87310761|ref|ZP_01092888.1| thymidylate kinase [Blastopirellula marina DSM 3645] gi|87286518|gb|EAQ78425.1| thymidylate kinase [Blastopirellula marina DSM 3645] Length = 205 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 63/214 (29%), Positives = 109/214 (50%), Gaps = 15/214 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F F+G++G GK+T +L +L+ + V R+PG TP E R +LL E Sbjct: 1 MFFVFDGLDGVGKSTQQTLFTAWLEMQGAKVVSCRDPGSTPLGERLRSILLDKSDLEIAP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E +++ AR V IRPAL G ++ DR+L ++ AYQG + +D+++ + Sbjct: 61 RSEMLLYMTARAQLVAETIRPALEAGAAVVSDRYLLANIAYQG---YGGGVDVDTIRNVG 117 Query: 125 VQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V+PD T +LDLP L R+ ES ++YF E+ R+ FL A Sbjct: 118 LAATDGVLPDATFLLDLPTKAALGRLNRALDRVESRGIEYF--------EQVREGFLAEA 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + HI+D++ + + I I ++++R Sbjct: 170 K-KFENVHIIDASRKVEEIQAEIRRIALTVLERR 202 >gi|294508726|ref|YP_003572785.1| Thymidylate kinase [Salinibacter ruber M8] gi|294345054|emb|CBH25832.1| Thymidylate kinase [Salinibacter ruber M8] Length = 221 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 6/209 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L ++FEGI+G+GK+T L LQ + ++ + REPGGT +E R VLL ++ Sbjct: 2 LLLTFEGIDGSGKSTQAHRLNEHLQERGHETLLVREPGGTELSEQVRSVLLEPTLN-VHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 AE ++F+AAR V IRPAL G+I++CDRF DS+ AYQG R+ + +L S Sbjct: 61 MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++PD T +++L + + R + + A D E +D + + + +A Sbjct: 121 VTDGLVPDRTYLVELDPET----ARARRTEGDDAAGDRMEAEDEAFYHRVAAAYDTLADE 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R H +D S +++ I V L+ Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205 >gi|21672617|ref|NP_660684.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|21623249|gb|AAM67895.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 213 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 98/175 (56%), Gaps = 8/175 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGKT ++R L+ N +V + R+PG TP AE R ++ + +++F Sbjct: 7 FIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTYIEDFE 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++ AAR+ V+ +I+PAL +G ++ DR SS AYQG + ++ L+ + Sbjct: 67 KETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLINKLKYL 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +Q+ +PD TI LD+ +IGLKR R LD E + + +K R +L Sbjct: 127 FLQDFIPDLTIYLDVYPEIGLKRASKRNH------LDRIEHRSLTFFKKTRASYL 175 >gi|284931760|gb|ADC31698.1| Thymidylate kinase [Mycoplasma gallisepticum str. F] Length = 210 Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 118/217 (54%), Gaps = 16/217 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR----KNYDVHVTREPGGTPAAEAARHVLLS 56 M G+FI EG++G+GK+ S LKR + + + +REPGG +EA R +++ Sbjct: 1 MKKGVFIVIEGVDGSGKS---SFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMK 57 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + EA++F A+R +H++ I PAL E KI++CDRF+ SS+ YQG ++ + Sbjct: 58 LSNSD--PLTEALLFCASRNEHLKKKILPALNENKIVICDRFVVSSWIYQGLIKNAGYEK 115 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + E + PD TI+ D+ +I KR+ R ++ LD + ++ + +K R Sbjct: 116 VKKINECVTDGLEPDLTILFDVDPEIAAKRISERSTMNH---LDTYTKERI---DKIRNA 169 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +L+ ++ + I++++ ++ ++NI+ V+ Sbjct: 170 YLERLKDNK-KAKIINASLDLDTIYDQVVNIITLFVK 205 >gi|90406894|ref|ZP_01215085.1| thymidylate kinase [Psychromonas sp. CNPT3] gi|90311936|gb|EAS40030.1| thymidylate kinase [Psychromonas sp. CNPT3] Length = 218 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 10/179 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVL-LSCGVDE 61 FI EG+EGAGKTT I + +L + + TREPGGT E R ++ + + Sbjct: 11 FIVIEGLEGAGKTTAIRYIGNWLAEQGVPTSKMTYTREPGGTKLGEYMRDIIKMDLNDES 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ A+R+ VE VI+PAL +G I++ DR SS AYQG F+ SL+ Sbjct: 71 LDDKAELLLMYASRVQLVEAVIKPALAQGHIVIGDRHNYSSLAYQGGGRGLDMHFIHSLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++S+ + D T+ LD+ +GL+R + R LD ER + E+ RQ+FL++ Sbjct: 131 QLSLGDFKADFTLYLDIDPALGLQRARGR------GELDRIERLAIDFFERTRQVFLNL 183 >gi|291066996|gb|ADD74112.1| dTMP kinase [Rickettsia felis] Length = 227 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 22/176 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++G+GK+T +LK +L ++ V TREPGGT AE R +L+ + Sbjct: 10 GRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVH---RDLL 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 +E + AAR DH+ I PA+ G ++CDRF+DS+ YQG E DS L SL + Sbjct: 67 PMSELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVY-SLHK 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--------------NRYSLRESACLDYFER 164 + +MPD T +D+ + ++RV+ NR+ +++ LDY+++ Sbjct: 126 KLMPSIMPDITFFIDIEPVLAMERVKVRNGSDYSSSNLRNNRFDIKD---LDYYKK 178 >gi|67459806|ref|YP_247429.1| thymidylate kinase [Rickettsia felis URRWXCal2] gi|67459875|ref|YP_247497.1| thymidylate kinase [Rickettsia felis URRWXCal2] gi|67005339|gb|AAY62264.1| Thymidylate kinase [Rickettsia felis URRWXCal2] gi|67005408|gb|AAY62332.1| Thymidylate kinase [Rickettsia felis URRWXCal2] Length = 227 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 97/176 (55%), Gaps = 22/176 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++G+GK+T +LK +L ++ V TREPGGT AE R +L+ + Sbjct: 10 GRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVH---RDLL 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 +E + AAR DH+ I PA+ G ++CDRF+DS+ YQG E DS L SL + Sbjct: 67 PMSELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVY-SLHK 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--------------NRYSLRESACLDYFER 164 + +MPD T +D+ + ++RV+ NR+ +++ LDY+++ Sbjct: 126 KLMPSIMPDITFFIDIEPVLAMERVKVRNGSNYSSSNLRNNRFDIKD---LDYYKK 178 >gi|261415858|ref|YP_003249541.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372314|gb|ACX75059.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327609|gb|ADL26810.1| dTMP kinase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 210 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 6/204 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA- 64 F S EGI+G+GK+T I +L R L+ + + V REPGG +E R +LL A Sbjct: 7 FFSLEGIDGSGKSTQIDMLVRVLESEGHKVVRLREPGGAKISERIRELLLDPAFKGIMAD 66 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E +++ AAR + +I+PAL G I++ DRF S++AYQG + L E++ Sbjct: 67 DTELLLYNAARAQVIHEIIKPALDAGNIVIADRFAWSTFAYQGYARGLGADKVQRLTELT 126 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 P+ T++LDL V+ KR+ R D E + E+ R+ +L R+ Sbjct: 127 CGGCFPELTVVLDLTVEASRKRMAIR-----GGAPDRLESEKAEFFERVREGYLAAGRDY 181 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 D +V++ + V ++L+++ Sbjct: 182 SDCVSVVNADRTPDEVHQDVLSLI 205 >gi|313835739|gb|EFS73453.1| thymidylate kinase [Propionibacterium acnes HL037PA2] gi|314928412|gb|EFS92243.1| thymidylate kinase [Propionibacterium acnes HL044PA1] gi|314970109|gb|EFT14207.1| thymidylate kinase [Propionibacterium acnes HL037PA3] Length = 215 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ EG +GAGKTT LL ++L + +TREPG + + R ++LS Sbjct: 13 GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EG++++CDR++DS+ AYQG + L Sbjct: 73 CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FL +A Sbjct: 133 WATVGLVPDVTVLLDVDPCEGTAKI---------AAKDRLEAAGDEFHLRVRQHFLSLAA 183 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ + + ++ I + V L+ + Sbjct: 184 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 215 >gi|328474618|gb|EGF45423.1| thymidylate kinase [Vibrio parahaemolyticus 10329] Length = 209 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I ++L Q ++ TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPCIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P ++++ S + V+ +I + + E + ++ Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209 >gi|269967358|ref|ZP_06181419.1| thymidylate kinase [Vibrio alginolyticus 40B] gi|269828066|gb|EEZ82339.1| thymidylate kinase [Vibrio alginolyticus 40B] Length = 210 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I + L+ D+ TREPGGTP AE R ++ +E Sbjct: 6 FIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHEGEELK 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 66 DMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 126 TLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P I+++ + + V+ +I + + E + ++ Sbjct: 180 DPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 210 >gi|261253405|ref|ZP_05945978.1| thymidylate kinase [Vibrio orientalis CIP 102891] gi|260936796|gb|EEX92785.1| thymidylate kinase [Vibrio orientalis CIP 102891] Length = 209 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 69/210 (32%), Positives = 111/210 (52%), Gaps = 9/210 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M + FI EG+EGAGK++ I+ + L++ D + TREPGGT AE R ++ Sbjct: 1 MTNAKFIVIEGLEGAGKSSAINAVLETLKQSGVDAITNTREPGGTALAEKLRTLVKQEHE 60 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 61 GEQLQDMTELLLMYAARVQLVENVIKPALTSGTWVVGDRHDMSSQAYQGGGRKIPAATML 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD TI LD+ +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 ALKQTTLGDFKPDLTIYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A Q + +V++ VA +I N++ Sbjct: 175 QLA-EQDESVVVVNAEQDIDKVAADISNVL 203 >gi|78183894|ref|YP_376328.1| thymidylate kinase [Synechococcus sp. CC9902] gi|123582163|sp|Q3B043|KTHY_SYNS9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78168188|gb|ABB25285.1| thymidylate kinase [Synechococcus sp. CC9902] Length = 209 Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/150 (38%), Positives = 83/150 (55%), Gaps = 6/150 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 +G FI +GI+G GK+T I L ++L + TREPGGTP ++ R +LL Sbjct: 2 TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTAQLICTREPGGTPLGQSIRELLLHT 61 Query: 58 GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D+ AE +++AA R HV+ VIRPAL+ G +L DRF S+ AYQG Sbjct: 62 EADQVPSVTAELLLYAADRAQHVDTVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRQL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + L+ I+ + PD T L +PV++ L+R Sbjct: 122 ITRLESIATTGLEPDLTAWLMVPVEVSLQR 151 >gi|328906772|gb|EGG26544.1| dTMP kinase [Propionibacterium sp. P08] Length = 209 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ EG +GAGKTT LL ++L + +TREPG + + R ++LS Sbjct: 7 GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EG++++CDR++DS+ AYQG + L Sbjct: 67 CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ A D E H + RQ FL +A Sbjct: 127 WATVGLVPDVTVLLDVDPCEGTAKI---------AAKDRLEAAGDEFHLRVRQHFLSLAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ + + ++ I + V L+ + Sbjct: 178 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 209 >gi|260776328|ref|ZP_05885223.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450] gi|260607551|gb|EEX33816.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450] Length = 209 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 17/210 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGK+T I+ + L++ + + TREPGGT AE R ++ Sbjct: 1 MTQAKFIVIEGLEGAGKSTAINAVLETLKQAGIEQIKNTREPGGTALAEQLRTLVKQ--- 57 Query: 60 DEFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQH 114 D G E E ++ AAR+ VENVI+PAL G ++ DR SS AYQ G R SQH Sbjct: 58 DHEGEELQDMTELLLMYAARVQLVENVIKPALNSGTWVVGDRHDMSSQAYQGGGRQISQH 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +L++ ++ + PD TI LDL IGL+R + R LD E+ D+ ++ R Sbjct: 118 T-MTALKQTTLGDFKPDLTIYLDLDPRIGLERARGR------GELDRIEKMDMSFFDRTR 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 +L++A+ ++++ + + VA +I Sbjct: 171 ARYLELAQCDSS-VVVINAEQTIELVAQDI 199 >gi|258621219|ref|ZP_05716253.1| thymidylate kinase [Vibrio mimicus VM573] gi|258586607|gb|EEW11322.1| thymidylate kinase [Vibrio mimicus VM573] Length = 212 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 9/205 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG+EGAGK+T I ++ L + + + TREPGGT AE R ++ E Sbjct: 5 FIVIEGLEGAGKSTAIQVVVETLHQHGINQITRTREPGGTVLAEKLRALVKEEHPGEVLQ 64 Query: 65 E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + +L++ Sbjct: 65 DITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMKNLKQT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ +L++A + Sbjct: 125 ALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYLELAES 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + ++D+A S + V+ +I ++ Sbjct: 179 D-ESVVLIDAAQSIEQVSKDIRTVL 202 >gi|91228553|ref|ZP_01262473.1| thymidylate kinase [Vibrio alginolyticus 12G01] gi|91187877|gb|EAS74189.1| thymidylate kinase [Vibrio alginolyticus 12G01] Length = 209 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I + L+ D+ TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P I+++ + + V+ +I + + E + ++ Sbjct: 179 DPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 209 >gi|85059043|ref|YP_454745.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans'] gi|123519602|sp|Q2NU35|KTHY_SODGM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|84779563|dbj|BAE74340.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans'] Length = 213 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 109/207 (52%), Gaps = 12/207 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EG+GKT+ I+ + L+ + DV TREPGGTP AEA R L+ GV Sbjct: 1 MNSK-FIVIEGLEGSGKTSAIAQVVDVLREQGIRDVVFTREPGGTPLAEALR-TLIKDGV 58 Query: 60 DE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG L Sbjct: 59 GEEPVTDRAELLMLYAARVQLVEGVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDARLL 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +L++ + + PD T+ LD+P +GL R + R LD E + + ++ R + Sbjct: 119 QTLRDAVLGDFRPDLTLYLDIPPALGLARARAR------GELDRIEVESLAFFDRTRARY 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 +A DR +D++ +V+ + Sbjct: 173 QALAAAD-DRMVTLDASQPLAAVSAAL 198 >gi|241667797|ref|ZP_04755375.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876341|ref|ZP_05249051.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842362|gb|EET20776.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 204 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 3/162 (1%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T I +K++L K+ TREPGGT AE R ++L D E Sbjct: 4 FIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIHP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG L+ L E Sbjct: 64 DSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGFDKLNVLNETF 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 +++ PD I LD+ IGL R S E A L +F+R Sbjct: 124 LKDCQPDLIIYLDIDPAIGLARAGKVGSPDRIEKAGLAFFDR 165 >gi|167855936|ref|ZP_02478684.1| thymidylate kinase [Haemophilus parasuis 29755] gi|167852930|gb|EDS24196.1| thymidylate kinase [Haemophilus parasuis 29755] Length = 208 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGK+ ++ L + TREPGGTP AEA R++ E Sbjct: 3 GKFIVIEGLEGAGKSNAQRVVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEHT 62 Query: 64 AE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AE ++ AAR VE VI PAL GK ++ DR SS AYQG L +D + Sbjct: 63 TDKAEVLMIYAARTQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGLAEL-VDEVGS 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + PD TI LD+ IGL+R + R LD E+ D+ + R+ ++ + + Sbjct: 122 VILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLVK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ + + V+ +I V Sbjct: 176 DNP-KAVLINAEPAIEQVSADIQQAV 200 >gi|242398141|ref|YP_002993565.1| probable thymidylate kinase [Thermococcus sibiricus MM 739] gi|259494284|sp|C6A0S1|KTHY_THESM RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|242264534|gb|ACS89216.1| probable thymidylate kinase [Thermococcus sibiricus MM 739] Length = 210 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 115/211 (54%), Gaps = 18/211 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+FI EGI+GAGK+T +L ++ + + Y+V +T+EP T + R ++L G + Sbjct: 2 GIFIVLEGIDGAGKSTQAKMLAKWFENRGYEVVLTKEPTDTAFGKLIRRLVLIGGKEGII 61 Query: 61 ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 EAEA++FAA R +HV+ +I P++ GK+++ DR+ SS AYQ R L L Sbjct: 62 DGARISKEAEALLFAADRAEHVKKLIEPSIKAGKVVISDRYFYSSLAYQWARG----LDL 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L ++ D I+LDLPV + R+ R S+R F+ K V + +K R+ + Sbjct: 118 NWLINLNAFAPRADLVILLDLPVKESINRINGR-SIRSE-----FD-KIVELQKKVRKNY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L +A + + I+++ + + +I ++ Sbjct: 171 LKLAE-KFNEIRIINALAPVEDIHNDITALI 200 >gi|304372905|ref|YP_003856114.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1] gi|304309096|gb|ADM21576.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1] Length = 215 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 11/149 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60 +FI+FEGI+G+GK+T I L +LQ + ++ +TREPGG EA R++LL Sbjct: 1 MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFL 117 E E I+FAA+R H+E +I P+L EGKI++ DRF+DSS AYQ E D +Q + Sbjct: 60 EISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQVFGNEIDINQ---V 116 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + L + + PD T LD+P+ +R Sbjct: 117 EQLNDWISNKTQPDLTFWLDVPIQQAFER 145 >gi|83814827|ref|YP_446793.1| thymidylate kinase [Salinibacter ruber DSM 13855] gi|83756221|gb|ABC44334.1| thymidylate kinase [Salinibacter ruber DSM 13855] Length = 221 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 6/209 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L ++FEGI+G+GK+T L LQ + + + REPGGT +E R VLL ++ Sbjct: 2 LLLTFEGIDGSGKSTQAHRLNEHLQERGHKTLLVREPGGTELSEQVRSVLLEPALN-VHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEI 123 AE ++F+AAR V IRPAL G+I++CDRF DS+ AYQG R+ + +L S Sbjct: 61 MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++PD T +++L + + R + A D E +D + + + +A Sbjct: 121 VTDGLVPDRTYLVELDPET----ARARRTEGNDAAGDRMEAEDEAFYHRVAAAYDTLADE 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R H +D S +++ I V L+ Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205 >gi|239994633|ref|ZP_04715157.1| thymidylate kinase [Alteromonas macleodii ATCC 27126] Length = 216 Score = 101 bits (252), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 107/207 (51%), Gaps = 11/207 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGK++ I L+ + L+ V TREPGGTP AEA R + + Sbjct: 3 GKFIVVEGLEGAGKSSVIGLIVQALKGAGKRVEQTREPGGTPMAEAIRECVKHDWDETVS 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++ AAR+ + N I P+L G ++ DR SS AYQG + ++ +I Sbjct: 63 EETELLLMYAARVQLLTNKILPSLDAGAWVVGDRHDLSSQAYQGGGRGVSGKTMSAISDI 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ PD T+ LD+ +GL+R + R L E A L +FER R +L +A Sbjct: 123 ALKGFKPDLTLYLDVEPAVGLERARGRGELDRIEQAGLAFFERT--------RAKYLSLA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + Q + +V + + V +++ I+ Sbjct: 175 K-QDESIVVVSAMQPMEKVHQDVIAII 200 >gi|289208432|ref|YP_003460498.1| thymidylate kinase [Thioalkalivibrio sp. K90mix] gi|288944063|gb|ADC71762.1| thymidylate kinase [Thioalkalivibrio sp. K90mix] Length = 219 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 105/199 (52%), Gaps = 6/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ EGIEG+GK+T ++ + L+ + TREPGGT E R +LL + E Sbjct: 11 FVVLEGIEGSGKSTQLATVVESLRATGIEPECTREPGGTALGERLRGLLLDPDLPGMCPE 70 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR H+ +VIRPAL G+ ++ DRF D+S+AYQG + L++ Sbjct: 71 AELLLMFAARAQHLASVIRPALAAGRWVVSDRFTDASFAYQGAGRGLGAERVARLEDWVQ 130 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 ++ PD ++LD+ GL+R R D ER+ + + R+ +L+ AR P Sbjct: 131 GDLRPDLVLLLDIDPATGLERAVQR------GRRDRIEREALEFFARVREAYLERARAYP 184 Query: 186 DRCHIVDSAHSFQSVATNI 204 + ++D + + VA ++ Sbjct: 185 EHYRVIDGHGTPEQVADSV 203 >gi|262277219|ref|ZP_06055012.1| thymidylate kinase [alpha proteobacterium HIMB114] gi|262224322|gb|EEY74781.1| thymidylate kinase [alpha proteobacterium HIMB114] Length = 212 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 8/206 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G I+FEGIEG+GK+T I+ + +FL+++ TREPGGT AE R +++ + Sbjct: 3 IEKGNLITFEGIEGSGKSTQINEVYKFLKKRKIKCIKTREPGGTRLAEKIRKIIIKDLKN 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ AAR +H I+ + +G ++LCDR++DS+YAYQ ++ L Sbjct: 63 NEDNLTELLLLFAARSNHFL-KIKKLIKKGYLVLCDRYIDSTYAYQHYEQGQDIKLINFL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q + ++ P T +D+PV RV+ R LD F++ K R+ F+++ Sbjct: 122 QNLISKKSFPKITFFIDIPVKTSKSRVKGR------GRLDRFDKYGEKKLNKLRKSFINL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 + + +R ++D + + + I+N Sbjct: 176 KK-KHNRIIMIDGTKNKKDITIQIVN 200 >gi|113955289|ref|YP_731781.1| thymidylate kinase [Synechococcus sp. CC9311] gi|123327571|sp|Q0I6Z1|KTHY_SYNS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|113882640|gb|ABI47598.1| thymidylate kinase [Synechococcus sp. CC9311] Length = 212 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 7/168 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58 G + EGI+G GKTT + L +L + + VTREPGGT + R +LL Sbjct: 2 GRLLVLEGIDGCGKTTQLQQLSSWLPKSGLMPDESRLVVTREPGGTALGTSLRQLLLHPP 61 Query: 59 VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D + G AE +++AA R HV+ VI+PAL G +L DRF S+ AYQG + Sbjct: 62 QDADPGPTAELLLYAADRAQHVDRVIQPALERGDWVLSDRFTGSTMAYQGYGRGLNRELI 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 L+ I+ + + PD T+ LD+P+ + ++R +R R E+ L + ER Sbjct: 122 TDLERIATRGLTPDMTVWLDIPLALSVQRRGSREEDRIEAEGLAFLER 169 >gi|91205052|ref|YP_537407.1| thymidylate kinase [Rickettsia bellii RML369-C] gi|122425994|sp|Q1RJZ6|KTHY_RICBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91068596|gb|ABE04318.1| Thymidylate kinase [Rickettsia bellii RML369-C] Length = 206 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 3/150 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVHTDLL 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +A+ AAR DH+ I PAL G I++CDRF+DS+ YQG + + +L Sbjct: 64 PMSELLQAM---AARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + + +MPD T +D+ I ++RV +R Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERVNSR 150 >gi|330431479|gb|AEC16538.1| thymidylate kinase [Gallibacterium anatis UMN179] Length = 210 Score = 101 bits (251), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGKT+ + L+ + V TREPGGTP AE R ++ DE Sbjct: 5 FIVLEGLEGAGKTSARDTVVAVLKELGINEFVFTREPGGTPLAEKLRQLIKQGEGDEVIT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L +L++ Sbjct: 65 DKAELLMLYAARVQLVENVIKPALKQGKWVIGDRHDLSSQAYQGGGRGLDINLLMTLKQA 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T+ LD+ +IGL R ++R LD E++ + ++ RQ +L + Sbjct: 125 VLGDFTPDLTLYLDVDPEIGLARARSR------GELDRIEQQQIDFFQRTRQRYLQLV-E 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +D+ F V + + + Q++ Sbjct: 178 ADEKSVTIDANLDFPEVNKQLRQAITQWFQRQ 209 >gi|294660635|ref|NP_853503.2| thymidylate kinase [Mycoplasma gallisepticum str. R(low)] gi|298286819|sp|Q7NAD7|KTHY_MYCGA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|284812298|gb|AAP57071.2| Thymidylate kinase [Mycoplasma gallisepticum str. R(low)] gi|284931003|gb|ADC30942.1| Thymidylate kinase [Mycoplasma gallisepticum str. R(high)] Length = 210 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 16/217 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR----KNYDVHVTREPGGTPAAEAARHVLLS 56 M G+FI EG++G+GK+ S LKR + + + +REPGG +EA R +++ Sbjct: 1 MKKGVFIVIEGVDGSGKS---SFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMK 57 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + EA++F A+R +H++ I PAL E KI +CDRF+ SS+ YQG ++ + Sbjct: 58 LSNSD--PLTEALLFCASRNEHLKKKILPALNENKIAICDRFVVSSWIYQGLIKNAGYEK 115 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + E + PD TI+ D+ +I KR+ R ++ LD + ++ + K R Sbjct: 116 VKKINEYVTDGLEPDLTILFDVDPEIAAKRISERSTMNH---LDAYTKERI---NKIRNA 169 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +L+ ++ + I++++ +V ++NI+ V+ Sbjct: 170 YLERLKDNK-KAKIINASLDLDTVYDQVVNIITLFVK 205 >gi|219871835|ref|YP_002476210.1| thymidylate kinase [Haemophilus parasuis SH0165] gi|254808297|sp|B8F7G0|KTHY_HAEPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219692039|gb|ACL33262.1| thymidylate kinase [Haemophilus parasuis SH0165] Length = 208 Score = 101 bits (251), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 9/206 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG+EGAGK+ ++ L + TREPGGTP AEA R++ E Sbjct: 3 GKFIVIEGLEGAGKSNAQRIVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEHT 62 Query: 64 AE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AE ++ AAR+ VE VI PAL GK ++ DR SS AYQG L +D + Sbjct: 63 TDKAEVLMIYAARIQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGLAEL-VDEVGS 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI LD+ IGL+R + R LD E+ D+ + R+ ++ + + Sbjct: 122 AILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLVK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 + P + ++++ + + V+ +I V Sbjct: 176 DNP-KAVLINAEPAIEQVSADIQQAV 200 >gi|323499364|ref|ZP_08104340.1| thymidylate kinase [Vibrio sinaloensis DSM 21326] gi|323315549|gb|EGA68584.1| thymidylate kinase [Vibrio sinaloensis DSM 21326] Length = 210 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 114/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M+ FI EG+EGAGK+T I + L + + TREPGGT AE R ++ Sbjct: 1 MSQAKFIVIEGLEGAGKSTAIKAVLDTLNLAGVESIKNTREPGGTVLAETLRTLVKQEHE 60 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VENVI+PAL +G+ ++ DR SS AYQG + Sbjct: 61 GEVLQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIAKETMS 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ PD T+ LD+ +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 ALKQTTLGSFKPDLTLYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A N D I+++ + VA +I + ++K+ Sbjct: 175 ELA-NGDDSVLIINAEQPIEKVAADIKTTLTHWLEKQ 210 >gi|114563411|ref|YP_750924.1| dTMP kinase [Shewanella frigidimarina NCIMB 400] gi|122299553|sp|Q081H9|KTHY_SHEFN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|114334704|gb|ABI72086.1| thymidylate kinase [Shewanella frigidimarina NCIMB 400] Length = 215 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 14/205 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVL-LSCGVDE 61 G FI EG+EGAGK++ I+L+ +++ V TREPGGTP AE R ++ ++ D Sbjct: 6 GKFIVIEGLEGAGKSSAIALVNDIIKQHIGQAPVCTREPGGTPLAEKMRDLVKIADETDP 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EAE ++ AAR + NVI+PAL G+ +L DR SS AYQG L + ++ Sbjct: 66 LCDEAECLLIYAARTQLIANVIKPALSVGQWVLGDRHNLSSLAYQGGGRGLMPL-VKAVS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLD 179 + ++ PD T+ LD+ +GL R +R L E +D+FER R+ +L Sbjct: 125 DACLRGFKPDLTLYLDIDPTLGLSRAASRGELDRIEQQAIDFFERA--------RRTYLQ 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A ++ D ++D++ S + V +I Sbjct: 177 LA-HEDDSIVVIDASQSMEQVHNDI 200 >gi|330829693|ref|YP_004392645.1| Thymidylate kinase [Aeromonas veronii B565] gi|328804829|gb|AEB50028.1| Thymidylate kinase [Aeromonas veronii B565] Length = 213 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 8/200 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG+EGAGK++ + + +LQR + + TREPGGTP AE R ++ + Sbjct: 4 FIVIEGLEGAGKSSAVRYVTDYLQRHGINRIECTREPGGTPLAERMRAIVKEVHDERLTI 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A+R+ VE I+PAL +G ++ DR SS AYQG + ++++ Sbjct: 64 EAELLLMYASRVQLVETRIKPALADGVWVVGDRHDLSSQAYQGGGRGIDAQLIGAIKQAV 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T+ LD+ +GL+R ++R LD E + + E+ R +L++A + Sbjct: 124 LGNFKPDLTLYLDIDPALGLQRARHR------GELDRIELEQLSFFERTRTRYLELA-AK 176 Query: 185 PDRCHIVDSAHSFQSVATNI 204 D ++D+A + + V I Sbjct: 177 DDSIVVIDAAQTPEQVKAAI 196 >gi|157827624|ref|YP_001496688.1| thymidylate kinase [Rickettsia bellii OSU 85-389] gi|166223110|sp|A8GXQ1|KTHY_RICB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157802928|gb|ABV79651.1| thymidylate kinase [Rickettsia bellii OSU 85-389] Length = 206 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 55/150 (36%), Positives = 85/150 (56%), Gaps = 3/150 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVHTDLL 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +A+ AAR DH+ I PAL G I++CDRF+DS+ YQG + + +L Sbjct: 64 PMSELLQAM---AARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + + +MPD T +D+ I ++R+ +R Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERINSR 150 >gi|330723507|gb|AEC45877.1| thymidylate kinase [Mycoplasma hyorhinis MCLD] Length = 215 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 5/146 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60 +FI+FEGI+G+GK+T I L +LQ + ++ +TREPGG EA R++LL Sbjct: 1 MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E I+FAA+R H+E +I P+L EGKI++ DRF+DSS AYQ + ++ L Sbjct: 60 EISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQAFGNKIDINQVEQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146 + + PD T LD+P+ +R Sbjct: 120 NDWISNKTQPDLTFWLDVPIQQAFER 145 >gi|157826103|ref|YP_001493823.1| thymidylate kinase [Rickettsia akari str. Hartford] gi|166223109|sp|A8GPJ0|KTHY_RICAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157800061|gb|ABV75315.1| thymidylate kinase [Rickettsia akari str. Hartford] Length = 203 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 59/194 (30%), Positives = 104/194 (53%), Gaps = 9/194 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG +G GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGDGIGKSTQAQMLYEYLKSQNTHVILTREVGGTAVAEKMRAILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E + AAR DH+ I PAL +G +++CDRF+DS+ YQG + + +L Sbjct: 61 SLLPMSELLQAMAARYDHMARKIIPALQDGHVVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I + +MP+ T +D+ D ++RV +R + F+ + + ++K F + Sbjct: 121 HKILMPSLMPEITFFIDVEPDTAIERVNSR------NMSNKFDIRGIDFYKKVYDCFKAL 174 Query: 181 ARNQPDRCHIVDSA 194 + P+R + ++ Sbjct: 175 SNRFPERIKTIKAS 188 >gi|114775378|ref|ZP_01450946.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1] gi|114553489|gb|EAU55870.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1] Length = 211 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 5/207 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+FEG +G+GK+T + L +L + T EPG T R +LLS G D Sbjct: 2 GKLITFEGGDGSGKSTQLRLTADWLTSIGKRIITTFEPGDTQLGAKIRQLLLS-GEDVPV 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121 E E ++F A R HV V++PAL G +LCDR+ DS+ AYQ + + L + Sbjct: 61 PECEMLLFLADRAQHVREVVQPALQRGDWVLCDRYSDSTLAYQLAARKLGAADELLRQML 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T+ DLPV L+R++ R E + + + + H++ F A Sbjct: 121 TFAECGVTPDLTLWFDLPVSAALERMRQRQQAGEKST--RLDDEALSFHQRVTAAFASQA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P R VD+ +SV + +I+ Sbjct: 179 EAEPGRMMRVDAVGDIKSVEQQVHHII 205 >gi|312880075|ref|ZP_07739875.1| thymidylate kinase [Aminomonas paucivorans DSM 12260] gi|310783366|gb|EFQ23764.1| thymidylate kinase [Aminomonas paucivorans DSM 12260] Length = 211 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 108/211 (51%), Gaps = 14/211 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGV 59 GLF++ EGI+G GK+T L +L+ ++ V TREPGG P R +L Sbjct: 5 KEGLFLTLEGIDGCGKSTQAGRLASWLRERDPRRPVLWTREPGGWPGGADFRERILRGQW 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +E +F A R +HV I PAL G+ +LC+R+ DS+ AYQ + L L++ Sbjct: 65 EH--PWSEVFLFLADRCEHVLREILPALARGEQVLCERYHDSTLAYQ---SFGRGLPLEA 119 Query: 120 LQEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L+ S + +P T++LDLPV+ L+R+Q R D E + E+ R+ F Sbjct: 120 LRRFSRDCRFPLPHRTLLLDLPVEDALRRLQQR-----EGAADRLEGEGRPFLERVRRGF 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L +A +P+R +VD+ + V + V Sbjct: 175 LCLAEAEPERYAVVDARGDEEQVFARLCRAV 205 >gi|251771718|gb|EES52293.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum] Length = 252 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 12/206 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG++G+GK+T LK L ++ +T+EPGGTPA R +LL + Sbjct: 39 GCLIVFEGMDGSGKSTQARRLKARLDGLSHPAVLTKEPGGTPAGARLREILLDPAL-PLA 97 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE +F A R HV+ ++ P L G+ +L DR ++ AYQ + +L E+ Sbjct: 98 PEAELFLFEADRAMHVKTLLLPELRAGRTVLSDRLSFATVAYQSFGGGLSRELVSTLNEV 157 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR---YSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V+PD T +LDLPV +R++ R + E DYFER R+ +L++ Sbjct: 158 ALGGVVPDVTYLLDLPVSEMARRLRERGDGPTRFELLGGDYFERV--------REGYLEL 209 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 AR R ++D+ +++ I Sbjct: 210 ARIHRGRTVVLDATRDPETLEGEIFE 235 >gi|292487960|ref|YP_003530837.1| thymidylate kinase [Erwinia amylovora CFBP1430] gi|292899179|ref|YP_003538548.1| thymidylate kinase [Erwinia amylovora ATCC 49946] gi|291199027|emb|CBJ46138.1| thymidylate kinase [Erwinia amylovora ATCC 49946] gi|291553384|emb|CBA20429.1| Thymidylate kinase [Erwinia amylovora CFBP1430] Length = 210 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 9/215 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI EG+EGAGKTT + LQR D+ TREPGGTP AE R ++ V E Sbjct: 2 NGKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMVGE 61 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + L Sbjct: 62 RVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMSCL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + + P T+ LD+ ++GL+R + R LD E++ + + R +L + Sbjct: 122 KQAVLGDFAPHLTLYLDVTPELGLQRARAR------GELDRIEQESLNFFTRTRDRYLAL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A + R VD+ V + + + +Q++ Sbjct: 176 A-SADSRIKTVDATQPLAQVTAALQQTLNQWLQEQ 209 >gi|269139439|ref|YP_003296140.1| thymidylate kinase [Edwardsiella tarda EIB202] gi|267985100|gb|ACY84929.1| thymidylate kinase [Edwardsiella tarda EIB202] gi|304559335|gb|ADM41999.1| Thymidylate kinase [Edwardsiella tarda FL6-60] Length = 213 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 75/203 (36%), Positives = 108/203 (53%), Gaps = 13/203 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT ++ L+R +V TREPGGTP AE R L+ GV+ Sbjct: 5 FIVIEGLEGAGKTTARDVVVDELRRHGIQEVVFTREPGGTPLAEHLR-TLVKEGVEGETL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 AE ++ AAR+ +ENVI+PAL G ++ DR SS AYQ G R HL + +L+ Sbjct: 64 TDRAEVLMLYAARVQLIENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHL-MQTLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+P GL R ++R LD ER+ + E+ R +L +A Sbjct: 123 DTVLGDFKPDLTLYLDIPPQQGLARARSR------GELDRIERESLAFFERTRDRYLALA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 +D+A + V+ I Sbjct: 177 AADAT-IVTLDAAQPLEQVSAAI 198 >gi|167627244|ref|YP_001677744.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|238687894|sp|B0TWY5|KTHY_FRAP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|167597245|gb|ABZ87243.1| dTMP kinase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 204 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 3/162 (1%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI EG++GAGK+T I +K++L K+ TREPGGT AE R ++L D E Sbjct: 4 FIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIHP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG L+ L E Sbjct: 64 DSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGVDKLNVLNETF 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 +++ PD I LD+ IGL R S E A L +F+R Sbjct: 124 LKDCQPDLIIYLDIDPAIGLARAGKVGSPDRIEKAGLAFFDR 165 >gi|168705271|ref|ZP_02737548.1| thymidylate kinase [Gemmata obscuriglobus UQM 2246] Length = 216 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 11/213 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+S +G++G GK+T LL +L + V +PGGTP + R +LL G Sbjct: 6 FLSLDGLDGTGKSTQCRLLVEWLVAQGVPVTACTDPGGTPLGQELRKLLLFGREHRIGTR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLF-LDSLQE 122 EA++F A+R VE VIRPAL G++++ DRFL ++ YQG S + L+ + + Sbjct: 66 TEALLFMASRAQLVEEVIRPALARGEVVVSDRFLLANVVYQGHAGGLSPEELWQVGTFAT 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LDLP +I R E+ DY ER R F Sbjct: 126 GGAERLEPDLTLVLDLPPEIAAVRRNREADRMEARGADYAERV--------RAGFRSEVA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +R +VD+ + V I V L++ R Sbjct: 178 RRTERLRLVDATANVDGVQKIIRGEVAGLLRGR 210 >gi|149911598|ref|ZP_01900210.1| thymidylate kinase [Moritella sp. PE36] gi|149805319|gb|EDM65332.1| thymidylate kinase [Moritella sp. PE36] Length = 214 Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 62/163 (38%), Positives = 95/163 (58%), Gaps = 4/163 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 F+ EG+EGAGK+T +S + +L + DV TREPGGT AE R ++ +E Sbjct: 5 FLVIEGLEGAGKSTAVSTVINWLAEQGITDVITTREPGGTKLAEKMRAIVKDVDTEEPLT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR VE+VI+PAL +G+ ++ DR SS AYQG L++L+++ Sbjct: 65 ESAELMLMYAARAQLVEHVIKPALAKGQWVVGDRHDLSSIAYQGGGRGFDIGVLNTLRQV 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 ++ + PD T++LD+ +GL+R + R L E L +FER Sbjct: 125 AIGDFKPDMTLLLDIDPAVGLQRAKVRGELDRIELEQLSFFER 167 >gi|238810242|dbj|BAH70032.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 220 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 16/204 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK------NYDVHVTREPGGTPAAEAARHVLLSCG 58 +FI+FEG +G+GKTT I+ L L K NY +TREPGG EA + L Sbjct: 3 MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNY--VLTREPGGKDIIEAEKIRSLILD 60 Query: 59 VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D + + +EA+++ +R H+E V+ PAL E +++LCDR++DS +AYQG + F+ Sbjct: 61 KDSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFV 120 Query: 118 DSLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L + + + MPD TI ++ P + ++R Q R D + + + H+K + Sbjct: 121 KKLTNLIIDKTMPDITIFFEIKPEESKIRREQIR------IVSDRLDSETELFHQKVYKG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSV 200 + ++ + + DR +VD+ S + V Sbjct: 175 YHELIKKEKDRFIVVDATKSIEEV 198 >gi|318040596|ref|ZP_07972552.1| thymidylate kinase [Synechococcus sp. CB0101] Length = 219 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 63/165 (38%), Positives = 90/165 (54%), Gaps = 6/165 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLL-SC 57 G F+ EGI+G GKTT I L+ +L R + + VTREPGGT A R +LL Sbjct: 5 GRFLVLEGIDGCGKTTQIEHLRHWLPRSGLMPEGAQLMVTREPGGTELGRALRQLLLHPP 64 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G + AE +++AA R HV+ I PAL G +L DRF S+ AYQG + Sbjct: 65 GAAAPCSTAELLLYAADRAQHVQQQILPALEAGHWVLSDRFSGSTAAYQGYGRGLSLALI 124 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 D L I+ + + PD T++LD+P++ L+R +R + R A + F Sbjct: 125 DQLSLIACRGLQPDLTLLLDVPLEESLRRRGHRAADRIEASGEAF 169 >gi|262393774|ref|YP_003285628.1| thymidylate kinase [Vibrio sp. Ex25] gi|262337368|gb|ACY51163.1| thymidylate kinase [Vibrio sp. Ex25] Length = 209 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I + L+ + V TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P I+++ + + V+ +I + + E + ++ Sbjct: 179 DPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 209 >gi|308190301|ref|YP_003923232.1| dTMP kinase [Mycoplasma fermentans JER] gi|319777695|ref|YP_004137346.1| thymidylate kinase [Mycoplasma fermentans M64] gi|307625043|gb|ADN69348.1| dTMP kinase [Mycoplasma fermentans JER] gi|318038770|gb|ADV34969.1| Thymidylate kinase [Mycoplasma fermentans M64] Length = 218 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 111/204 (54%), Gaps = 16/204 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK------NYDVHVTREPGGTPAAEAARHVLLSCG 58 +FI+FEG +G+GKTT I+ L L K NY +TREPGG EA + L Sbjct: 1 MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNY--VLTREPGGKDIIEAEKIRSLILD 58 Query: 59 VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D + + +EA+++ +R H+E V+ PAL E +++LCDR++DS +AYQG + F+ Sbjct: 59 KDSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFV 118 Query: 118 DSLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L + + + MPD TI ++ P + ++R Q R D + + + H+K + Sbjct: 119 KKLTNLIIDKTMPDITIFFEIKPEESKIRREQIR------IVSDRLDSETELFHQKVYKG 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSV 200 + ++ + + DR +VD+ S + V Sbjct: 173 YHELIKKEKDRFIVVDATKSIEEV 196 >gi|254230304|ref|ZP_04923692.1| thymidylate kinase [Vibrio sp. Ex25] gi|151937164|gb|EDN56034.1| thymidylate kinase [Vibrio sp. Ex25] Length = 210 Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGK+T I + L+ + V TREPGGTP AE R ++ +E Sbjct: 6 FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 66 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 126 TLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P I+++ + + V+ +I + + E + ++ Sbjct: 180 DPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 210 >gi|329297193|ref|ZP_08254529.1| thymidylate kinase [Plautia stali symbiont] Length = 211 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 6/164 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT + L + DV TREPGGTP AE R VL+ G+D + Sbjct: 5 FIVIEGLEGAGKTTAREAVVAVLHEQGIEDVVFTREPGGTPLAEQLR-VLVKQGIDGEKV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 SDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGCGRGLDTQLMATLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 + + PD T+ LD+ +IGL+R + R L E L++F R Sbjct: 124 AVLGDFRPDLTLYLDVTPEIGLQRARARGELDRIEQESLNFFTR 167 >gi|325478730|gb|EGC81841.1| dTMP kinase [Anaerococcus prevotii ACS-065-V-Col13] Length = 209 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 12/215 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG +G+GKT+ ++ +K+ L + + REPGGT +E R +++ ++ Sbjct: 3 GKLIVFEGPDGSGKTSVLNEVKKILDQDGIEYLTFREPGGTDISEKIRDIIIDNDNEKMT 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E ++FAA+R +E IRP+L GK +LCDRF+ SS YQG ++L ++ +++I Sbjct: 63 ARCECLLFAASRAQLIEEEIRPSLEAGKTVLCDRFVLSSLLYQG---VGRNLGIEEVKKI 119 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + D TI D+ L R + ++ D E ++ H+K + + Sbjct: 120 NDFATDNIRADLTIFFDIDYKTALIRKRKNFT------ADRLENENFDFHKKIFDAYKKM 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A D +D++ S + V + +++E ++ + Sbjct: 174 ADEYEDEIKKIDASLSIEDVTKQAIQLIYESLEDK 208 >gi|262404371|ref|ZP_06080926.1| thymidylate kinase [Vibrio sp. RC586] gi|262349403|gb|EEY98541.1| thymidylate kinase [Vibrio sp. RC586] Length = 212 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 16/209 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ L + + + TREPGGT AE R ++ Sbjct: 1 MNAK-FIVIEGLEGAGKSTAIQVIVETLHQHGIEQITRTREPGGTVLAEKLRALVKE--- 56 Query: 60 DEFGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 D G E E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG Sbjct: 57 DHPGEELQDITELLLVYAARVQLVENVIKPALAQGFWVVGDRHDMSSQAYQGGGRQIALS 116 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + +L++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ Sbjct: 117 TMQNLKQTALGDFKPDLTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERARQ 170 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204 +L++A D VD+ S + V+ +I Sbjct: 171 RYLELAECD-DTVIWVDAEQSIEQVSKDI 198 >gi|291320671|ref|YP_003515936.1| thymidylate kinase [Mycoplasma agalactiae] gi|290753007|emb|CBH40983.1| Thymidylate kinase [Mycoplasma agalactiae] Length = 215 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 12/206 (5%) Query: 5 LFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT + L+++ L++K VTREPGG +E R ++L Sbjct: 1 MFITFEGLDGSGKTTILQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILDKE-S 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +EA+++ A+R H+E VI AL E K++LCDR++DS YAYQG F L Sbjct: 60 RLSPISEALLYTASRRIHIEKVILSALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179 E+ ++ +PD TI +D+ + Q+ Y S + D + + + H+K + + Sbjct: 120 TEMVIESTIPDITIFIDITAE------QSEYRRNVSRLISDRLDSESLEFHKKVFDAYKE 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNIL 205 + P R IV+ S + I+ Sbjct: 174 VINLDPKRFIIVNGLQSIPEILDEIV 199 >gi|206973280|ref|ZP_03234202.1| thymidylate kinase [Bacillus cereus AH1134] gi|206732164|gb|EDZ49364.1| thymidylate kinase [Bacillus cereus AH1134] Length = 205 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 104/195 (53%), Gaps = 4/195 (2%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G KTT ++LL +L++++ DV +T+EPGGT E R +L++ + +E +F A Sbjct: 5 GFWKTTQLNLLHSYLKKRSIDVILTKEPGGTVIGEKLRELLVNNLEIKLERLSELFLFEA 64 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R + ++ +++P + GK ++ DR +D S AYQG +D L ++ + PD T Sbjct: 65 DRHETIKKIVKPNIKAGKFVISDRGIDGSVAYQGFGREIDLEVIDYLTSLATENKQPDLT 124 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I++D+ +I +R+ N R + +D F+ + + R+ FL +A+ P R VD Sbjct: 125 ILIDIDPEIAQQRIAN----RNNVDIDKFDLEQLQFQANVRKGFLYMAKQNPKRIVTVDG 180 Query: 194 AHSFQSVATNILNIV 208 + + + I+ ++ Sbjct: 181 TLAIEDLHQKIVTLI 195 >gi|156975176|ref|YP_001446083.1| thymidylate kinase [Vibrio harveyi ATCC BAA-1116] gi|166223128|sp|A7MVG2|KTHY_VIBHB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|156526770|gb|ABU71856.1| hypothetical protein VIBHAR_02903 [Vibrio harveyi ATCC BAA-1116] Length = 210 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGK+T I + L+ + V TREPGGTP AE R ++ E Sbjct: 6 FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRGLVKEEHEGEDLK 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL + ++ DR SS AYQG + +L++ Sbjct: 66 DMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ E P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L++A N Sbjct: 126 TLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLELA-N 178 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D I+++ S + VA +I Sbjct: 179 ADDSIVIINAEQSIEDVAQDI 199 >gi|153835690|ref|ZP_01988357.1| thymidylate kinase [Vibrio harveyi HY01] gi|148867682|gb|EDL66956.1| thymidylate kinase [Vibrio harveyi HY01] Length = 209 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 107/201 (53%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGK+T I + L+ + V TREPGGTP AE R ++ E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEDLK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL + ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ E P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L++A N Sbjct: 125 TLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLELA-N 177 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 D I+++ S + VA +I Sbjct: 178 ADDSIVIINAEQSIEDVAQDI 198 >gi|148358930|ref|YP_001250137.1| thymidylate kinase [Legionella pneumophila str. Corby] gi|296106978|ref|YP_003618678.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy] gi|166221751|sp|A5IBP1|KTHY_LEGPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148280703|gb|ABQ54791.1| thymidylate kinase [Legionella pneumophila str. Corby] gi|295648879|gb|ADG24726.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy] Length = 212 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL EG+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNEGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ PD T+ LD+ ++G+ R ++R + E +++F R IH+ Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDTYH----- 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 I Q ++D+ + V ++I +++ E ++ Sbjct: 176 ILVKQNPEIMMIDANRPLEDVQSSIQSVIEEFIE 209 >gi|260435535|ref|ZP_05789505.1| thymidylate kinase [Synechococcus sp. WH 8109] gi|260413409|gb|EEX06705.1| thymidylate kinase [Synechococcus sp. WH 8109] Length = 209 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/188 (37%), Positives = 94/188 (50%), Gaps = 13/188 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 +G FI EGI+G GKTT I L +L K V TREPGGTP + R +LL Sbjct: 2 TGRFIVLEGIDGCGKTTQIQHLIEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61 Query: 58 GVDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E A AE +++AA R HVE +IRPAL G ++ DRF S+ AYQG Sbjct: 62 ADQEAPAPTAELLLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ + PD T+ L L V L+R R +E D E + E+ Q Sbjct: 122 IQRLERIATTGLQPDLTLWLRLSVQESLQR---RLGDKE----DRIEAEGAAFLERVAQG 174 Query: 177 FLDIARNQ 184 F ++AR + Sbjct: 175 FAELARQR 182 >gi|193216551|ref|YP_001999793.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1] gi|193001874|gb|ACF07089.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1] Length = 213 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 10/207 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAA--RHVLLSCGVDE 61 FI+ EG++G+GKTT I +LK +L K D TREPG +AEA R ++L G ++ Sbjct: 7 FITIEGMDGSGKTTIIEMLKDYLFNIGKIDDFVFTREPGSAYSAEAENIRKIVLDSG-NK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F +A++F +R ++E I PAL K ++ DRF SS+ YQG + + Sbjct: 66 FSPMVDALLFVTSRRINLEKAIWPALKAKKNVISDRFWHSSFVYQGILGKVGLDKVRQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E+ +++ PD I DL ++ ++R+ LRE D E V ++ R+ + ++ Sbjct: 126 EMVIEDTQPDFVIFFDLQPEVSVERLT---KLREKT--DRLETDQVEYYQALRKAYFEVI 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + P + I+D++ S V +L I+ Sbjct: 181 NSDPTKFRIIDASQSIVKVFEQLLIIL 207 >gi|119719934|ref|YP_920429.1| dTMP kinase [Thermofilum pendens Hrk 5] gi|119525054|gb|ABL78426.1| thymidylate kinase [Thermofilum pendens Hrk 5] Length = 254 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 111/216 (51%), Gaps = 19/216 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ GL+++ EGI+G+GKTT ++L L + + V + REP A + L +D Sbjct: 51 VDGGLYVALEGIDGSGKTTQAAMLYEKLSAEGFQVVIVREPW----VPAIKEFLYKHDLD 106 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EAE +FAA R+ V+ P+L GKI++ DR + +S AYQ R + Q L Sbjct: 107 ---VEAEVYLFAADRIILQREVVLPSLRAGKIVVSDRSVFASLAYQSSRGADQDFILAVN 163 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD ++LDLPV+ +KR+ +R + FE M EK R +L + Sbjct: 164 KSVR----FPDVVVLLDLPVEEAMKRLSSRVAQTR------FEDPGYM--EKVRAKYLQL 211 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A P++ +VD++ + V IL + +V+ R+ Sbjct: 212 AEEYPEKFIVVDASKPPEEVNREILREIVSIVRSRI 247 >gi|88807102|ref|ZP_01122614.1| Thymidylate kinase [Synechococcus sp. WH 7805] gi|88788316|gb|EAR19471.1| Thymidylate kinase [Synechococcus sp. WH 7805] Length = 213 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 20/161 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL-- 55 +G F+ EGI+G GKTT + L +L +H+TREPGGTP A R +LL Sbjct: 2 TGRFLVLEGIDGCGKTTQLRQLADWLPGSGLMPDGATLHLTREPGGTPLGRALRELLLHP 61 Query: 56 -----SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-R 109 C EAE +++AA R HV+ I PAL G +L DRF S+ AYQG R Sbjct: 62 PDAAAPC------PEAELLMYAADRAQHVQRRILPALKCGDWVLSDRFSGSTVAYQGHGR 115 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 Q L LD L+ I+ ++PD T+ LDLP++ + R +R Sbjct: 116 GLDQSLILD-LERIATAGLVPDVTLWLDLPLEASIARRGDR 155 >gi|320538798|ref|ZP_08038475.1| thymidylate kinase [Serratia symbiotica str. Tucson] gi|320031143|gb|EFW13145.1| thymidylate kinase [Serratia symbiotica str. Tucson] Length = 212 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ EG+EGAGKTT + L+ + + TREPGGTP AE R + +E Sbjct: 5 FVVIEGLEGAGKTTARDTVASVLREHGVNNIVFTREPGGTPLAEKLRDLFKRGVGNELPT 64 Query: 65 -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + + SL++ Sbjct: 65 IKAEVLMLYAARVQLVETVIKPALERGAWVVGDRHDLSSQAYQGGGRGTDPQLMLSLRDA 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+ LDLP IGL+R Q R LD E++ + + R+ +L +A Sbjct: 125 VLGSFRPDLTLYLDLPPLIGLQRAQAR------GELDRIEQEVLPFFTRTRERYLALA-A 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 Q + +D+ + V +I V +Q++ Sbjct: 178 QNESIVTLDATQPLEQVTASIRACVSRWLQQQ 209 >gi|161869607|ref|YP_001598774.1| thymidylate kinase [Neisseria meningitidis 053442] gi|161595160|gb|ABX72820.1| thymidylate kinase [Neisseria meningitidis 053442] Length = 173 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 7/171 (4%) Query: 38 TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97 TREPGGTP EA R +LL+ + G AE ++ AAR+ H+E+VI PAL +G ++ DR Sbjct: 4 TREPGGTPVGEALREILLNPET-KAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDR 62 Query: 98 FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 F D+++AYQG ++ L+ + PD T++LD+P+++ + R+ RE Sbjct: 63 FTDATFAYQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQ---TREK- 118 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D FE++ + R ++L+ A P+R I+DS S V +I ++ Sbjct: 119 --DRFEQEQADFFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNSIEKVL 167 >gi|312172085|emb|CBX80342.1| Thymidylate kinase [Erwinia amylovora ATCC BAA-2158] Length = 210 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/166 (39%), Positives = 90/166 (54%), Gaps = 4/166 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI EG+EGAGKTT + LQR D+ TREPGGTP AE R ++ V E Sbjct: 2 NGKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMVGE 61 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + L Sbjct: 62 RVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMSCL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 ++ + + P T+ LD+ ++GL+R + R L E L++F R Sbjct: 122 KQAVLGDFAPHLTLYLDVTPELGLQRARARGELDRIEQESLNFFTR 167 >gi|54294285|ref|YP_126700.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens] gi|81601377|sp|Q5WWU9|KTHY_LEGPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53754117|emb|CAH15590.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens] gi|307610103|emb|CBW99644.1| hypothetical protein LPW_14121 [Legionella pneumophila 130b] Length = 212 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL G+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ PD T+ LD+ ++G+ R ++R + E +++F R IH+ Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDTYH----- 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 I Q ++D+ S + V ++I +++ E ++ Sbjct: 176 ILVKQNPEIMMIDANRSLEEVQSSIQSVIEEFIE 209 >gi|160946460|ref|ZP_02093669.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270] gi|158447576|gb|EDP24571.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270] Length = 209 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 15/216 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG +G GKT+ ++L+K + + N + TREPGGT +E R ++LS Sbjct: 2 GLFITFEGPDGCGKTSIMNLIKEYY-KSNEKIIFTREPGGTKISEKIREIILSNDNSNMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++++A+R H++ +I+P L +G I++ DRF+ SS AYQG + L ++++++I Sbjct: 61 PRTEALLYSASRAQHIDELIKPNLDKGNIVISDRFVLSSLAYQG---GGRELGVENVKKI 117 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD I + LK R SL A D E H + ++++ Sbjct: 118 NDFAINGVNPDMIIFFYVDPLTTLK----RKSLNVDA--DRLELSGDDFHSRVYDTYMEL 171 Query: 181 ARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214 D VD+ S V ++ NI+ E +++ Sbjct: 172 LEKMKDEKVLKKVDATKSMSEVFEDVKNIIDEKLEE 207 >gi|145590421|ref|YP_001152423.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514] gi|145282189|gb|ABP49771.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514] Length = 196 Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/211 (30%), Positives = 115/211 (54%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ EGI+G+GK+T ISLL + L R V+VTREP +P + L G + Sbjct: 3 FVVIEGIDGSGKSTVISLLSKLLPR----VYVTREPSASPIGRLIKEWALREGTAD--PR 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A++FAA R++H + I P L EG I++C+R+++SS AYQG + + ++ ++ I+ Sbjct: 57 VDALLFAADRIEHYKREIEPRLREGYIVICERYVESSIAYQG----AAGVPIEYIKFINS 112 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T+ILD+ ++ + RV+ R + + L + +R R I+L +R Sbjct: 113 AVPKPDITVILDVDPEVAIARVKQRGTAEKYEQLSFLKRV--------RGIYL--SRAAE 162 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + ++D++ + VA + L++KR+ Sbjct: 163 EGYPVLDASRPAEEVAKEVAR----LIEKRL 189 >gi|254430315|ref|ZP_05044018.1| thymidylate kinase [Cyanobium sp. PCC 7001] gi|197624768|gb|EDY37327.1| thymidylate kinase [Cyanobium sp. PCC 7001] Length = 213 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 9/165 (5%) Query: 9 FEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLL-SCGVD 60 EGI+G GKTT + L R+L+ + + VTREPGGTP A R +LL G Sbjct: 3 LEGIDGCGKTTQLQALSRWLESSEAGCLPPDRQLIVTREPGGTPLGRALRELLLHPPGGA 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G AE +++AA R HVE+ IRPAL G +L DRF S+ AYQG + L Sbjct: 63 APGTTAELLLYAADRAQHVEHTIRPALAAGHWVLSDRFSGSTAAYQGHGRGLDLDLIQQL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 + ++ + PD T+ LDLP++ L+R R + R E+A + ER Sbjct: 123 EAVATAGLQPDLTLWLDLPLEDSLRRRGGRAADRIEAAGAGFLER 167 >gi|29135124|ref|NP_803754.1| ORF188 [Pseudomonas phage phiKZ] gi|18996653|gb|AAL83089.1|AF399011_188 PHIKZ188 [Pseudomonas phage phiKZ] Length = 352 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 15/226 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61 +GLF+ EG EG GKTT ++ L+++NYDV REPGGT +E R +L+ DE Sbjct: 2 NGLFVCIEGTEGVGKTTVTKMVVEELRKRNYDVVAMREPGGTATSEKIRQMLIWPEFKDE 61 Query: 62 F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-----YQGERDSSQHL 115 E + ++ +A R+ +VEN+IRPAL + KI++ +RF+ S+YA ++ L Sbjct: 62 VRPPEFDVLMHSAGRMLNVENIIRPALKDDKIVITERFIASTYALNVVPFEETNPYLSKL 121 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 F+D LQ ++ + T L P ++ KR++ R LDY+E K K + Sbjct: 122 FMDILQG-TLHSIPEPATFFLTAPEEVRKKRIEMR-----DRGLDYYESKGSSYFNKVDE 175 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + + NQP +VD+ + I+ + L K+ + SS Sbjct: 176 GYGRLI-NQPSSI-VVDTNRDLDIIVNEIVESIIFLRDKQKNKQSS 219 >gi|33864255|ref|NP_895815.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9313] gi|46576455|sp|Q7V4G2|KTHY_PROMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33641035|emb|CAE22164.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9313] Length = 216 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 64/169 (37%), Positives = 92/169 (54%), Gaps = 7/169 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 SG F+ EGI+G GKTT + L +L R + +H+TREPGGT A R ++L Sbjct: 2 SGRFLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGIALRKLVLHP 61 Query: 58 GVDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D AE +++AA R HV +IRPAL +G +L DRF S+ AYQG Sbjct: 62 PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 + L++I+ ++PD T L+LPV+ L R R + R E+ +D+ R Sbjct: 122 IQQLEQIATAGLVPDLTFWLELPVEESLLRRDARSNDRIEAEGVDFLTR 170 >gi|328951753|ref|YP_004369087.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109] gi|328452077|gb|AEB07906.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109] Length = 217 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 79/225 (35%), Positives = 111/225 (49%), Gaps = 22/225 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG++G GKTT LL + L R V +TREP P + R +LL G Sbjct: 9 GGRLIAFEGVDGVGKTTQAHLLAQALSRLGLSVILTREPTTGPWGQQIRQILLH-GRQGL 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE +F A R +HV VIRPAL+ GKI++ DR+ SS AYQG L LD + Sbjct: 68 TPKAELELFIADRREHVAQVIRPALVAGKIVITDRYYFSSMAYQGA------LGLDPDRI 121 Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 E PD IIL LP+ R+Q R + S+ FE ++ K QIF Sbjct: 122 QKCHETFAPRPDLAIILTLPLSEITARLQQRSGQKRSS----FE--NLAYLTKVAQIF-- 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ---KRVSPLSS 221 +R + +D + +V IL +V L++ K+ +P+S Sbjct: 174 -SRLRAPYLQHLDGQGTIAAVHARILTLVQPLLKPSRKQSAPVSG 217 >gi|209695681|ref|YP_002263610.1| thymidylate kinase [Aliivibrio salmonicida LFI1238] gi|238057695|sp|B6EJ04|KTHY_ALISL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|208009633|emb|CAQ79929.1| thymidylate kinase [Aliivibrio salmonicida LFI1238] Length = 210 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 101/204 (49%), Gaps = 13/204 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGK+T I + L + VT REPGGTP AE R ++ DE Sbjct: 4 FIVIEGLEGAGKSTAIKNVLATLAKHGITAPVTTREPGGTPLAEKMRELVKQGHPDEPLT 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR V NVI+PAL G ++ DR SS AYQG + +++ Sbjct: 64 DMAELLLLYAARAQLVGNVIKPALAAGNWVVGDRHDLSSQAYQGGGRGFDRELMATMKRT 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI +D+ +GL+R R L E LD+FER R+ +L+ A Sbjct: 124 VLGDFTPDLTIYMDIDPKLGLQRASARGELDRIEQMKLDFFERS--------RERYLEFA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205 N + +D+ +V +I+ Sbjct: 176 NND-ESIITIDAGQDLDTVTASII 198 >gi|307595585|ref|YP_003901902.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429] gi|307550786|gb|ADN50851.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429] Length = 199 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 4/149 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++ EGI+G GK+T IS+L+R L+ Y V+ T EP +P R LL G + Sbjct: 1 MFVAIEGIDGVGKSTVISMLRRKLEESGYRVYTTAEPSQSPIGRLIRDWLLKPGSNVAHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++F A R+ H ++P L G +++ +R+++S+ AYQG Q + L E+ Sbjct: 61 SIFALLFTADRVQHYYGEVKPMLDSGYLVITERYMESTLAYQGAMGLQQ----EWLMELH 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 PD TIILD PVDI + R+++R L Sbjct: 117 RFVPKPDLTIILDAPVDIVISRLRSRREL 145 >gi|146329656|ref|YP_001210096.1| thymidylate kinase [Dichelobacter nodosus VCS1703A] gi|172047332|sp|A5EXE3|KTHY_DICNV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146233126|gb|ABQ14104.1| thymidylate kinase [Dichelobacter nodosus VCS1703A] Length = 203 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI +G EG+GK++ I + FLQ+ V TREPGGT EA R ++LS Sbjct: 3 GKFICLDGTEGSGKSSQIQAICSFLQQHGKTVITTREPGGTQIGEAIRELVLSPHYQP-Q 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E ++ AAR +H++ VI P L G ++ DRF D++YAYQG + +L++I Sbjct: 62 ALTELLLILAARHEHLQTVILPHLAAGTWVISDRFNDATYAYQGYGRGIDLKIIKTLEQI 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150 PD IL LP I +RV NR Sbjct: 122 IQASFQPDLACILCLPEHIAAERVHNR 148 >gi|52841629|ref|YP_095428.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|59798153|sp|Q5ZVP1|KTHY_LEGPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52628740|gb|AAU27481.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 212 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 62/214 (28%), Positives = 110/214 (51%), Gaps = 12/214 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL G+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ PD T+ LD+ ++G+ R ++R + E +++F R IH+ Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDTYH----- 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 I Q ++D+ S + V ++I +++ E ++ Sbjct: 176 ILVKQNPEIIMIDANRSLEEVQSSIQSVIEEFIE 209 >gi|116073928|ref|ZP_01471190.1| Thymidylate kinase [Synechococcus sp. RS9916] gi|116069233|gb|EAU74985.1| Thymidylate kinase [Synechococcus sp. RS9916] Length = 215 Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/168 (36%), Positives = 89/168 (52%), Gaps = 7/168 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL-SC 57 G F+ EGI+G GKTT + L +L + TREPGGTP +A R +LL Sbjct: 6 GRFLVMEGIDGCGKTTQMQRLAEWLPGSGLMPSGAQLVQTREPGGTPLGQALRQLLLHPP 65 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G AE +++AA R HV+ VIRPAL G ++ DRF S+ AYQG + Sbjct: 66 EAVAPGPVAELLLYAADRAQHVDQVIRPALARGDWVISDRFAGSTLAYQGYGRELNRELI 125 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 L++I+ + PD T +LDLP+ + R ++ + R E+A + +R Sbjct: 126 VQLEQIATTGLQPDATFLLDLPLAVSQARRADQANDRIEAAGQAFLQR 173 >gi|260655331|ref|ZP_05860819.1| dTMP kinase [Jonquetella anthropi E3_33 E1] gi|260629779|gb|EEX47973.1| dTMP kinase [Jonquetella anthropi E3_33 E1] Length = 200 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/204 (33%), Positives = 108/204 (52%), Gaps = 11/204 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G GK+T +LL L + DV TREPGG P A R +LL G+ G+ Sbjct: 1 MFITLEGIDGCGKSTQAALLANLLAERR-DVVRTREPGGWPEGGALRELLLHGGL--CGS 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A R +H VI PAL G+ ++C+R+ DS+ AYQ +++L + Sbjct: 58 WTEVLLFVADRCEHASKVILPALRRGETVICERYNDSTLAYQCWGRGLDREKVEALIDWC 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 P+ T+ DLPV++ L R +R C D FE +++ H + Q F +++R + Sbjct: 118 GLP-QPEVTLWFDLPVELALSRRASR-----GGC-DRFEAQELAFHRRIAQGFAELSR-E 169 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 R +D A S V ++N + Sbjct: 170 TGRIVRIDGAQSEADVTEQMVNAL 193 >gi|59712342|ref|YP_205118.1| thymidylate kinase [Vibrio fischeri ES114] gi|73920832|sp|Q5E416|KTHY_VIBF1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59480443|gb|AAW86230.1| thymidylate kinase [Vibrio fischeri ES114] Length = 210 Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 13/205 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGK+T I + L + VT REPGGTP AE R ++ DE Sbjct: 4 FIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPLT 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR V NVI+PAL G+ ++ DR SS AYQG + +++ Sbjct: 64 DMAELLLLYAARAQLVGNVIKPALARGEWVVGDRHDLSSQAYQGGGRGFDRELMMTMRNT 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI +D+ +GL+R R L E LD+FER R+ +L+ A Sbjct: 124 VLGDFKPDLTIYMDIDPKLGLQRASARGELDRIEQMKLDFFERS--------RERYLEFA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206 N + +D+ ++V +I+ Sbjct: 176 -NSDESIITIDAGQDLETVTNSIIT 199 >gi|108804784|ref|YP_644721.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941] gi|108766027|gb|ABG04909.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941] Length = 203 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 69/201 (34%), Positives = 102/201 (50%), Gaps = 14/201 (6%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64 ++ EG++ GK+T LL+ L + V TREPGGTPAAE R VLL D GA Sbjct: 1 MTVEGLDFCGKSTLARLLEGEL--GGWRVRFTREPGGTPAAERIRGVLL----DPRGAMD 54 Query: 65 -EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA ++AAAR DHV +I P+L G+ ++C+RFLDSS AYQG + L Sbjct: 55 PWTEAYLYAAARADHVRRLILPSLERGETVVCERFLDSSLAYQGRGRGLGMEAVRRLNAW 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V ++ PD T L + + + R + A D ER + + F ++AR Sbjct: 115 AVGDLAPDATFYLRVGAE-----ERARRARASGAPPDRIERSGGAFMRRVEEGFEELARR 169 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 +P R ++D + +A + Sbjct: 170 EPGRVRVLDGTLPPRELAALV 190 >gi|147919740|ref|YP_686514.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I] gi|110621910|emb|CAJ37188.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I] Length = 208 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 107/210 (50%), Gaps = 15/210 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVD 60 G IS EGI+GAGK+T I +L+R++Q + + + +EP G E AR + Sbjct: 5 KKGFLISIEGIDGAGKSTQIKMLQRWMQDRKIEHVILKEPTAGQYGREIARRAIAHEAT- 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E +F R + VE I PAL GK+++ DR+ S+ AYQG R + Sbjct: 64 --STEEELWLFMEDRKEDVEKNILPALRAGKVVVMDRYYQSNIAYQGARGLDTEKIREEN 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + S + PD I+LD+ GL R+ N + + LD FE+++ + +K R IFLDI Sbjct: 122 ERFSPR---PDLVIVLDIDPARGLSRIVN----QRKSQLDAFEKEEYL--QKVRNIFLDI 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 R QP+ I+ + S + V I+ + E Sbjct: 173 GR-QPNGV-IISADQSPEKVHQEIVKAIEE 200 >gi|197334909|ref|YP_002156557.1| thymidylate kinase [Vibrio fischeri MJ11] gi|238690296|sp|B5FG34|KTHY_VIBFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|197316399|gb|ACH65846.1| thymidylate kinase [Vibrio fischeri MJ11] Length = 210 Score = 98.6 bits (244), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 104/205 (50%), Gaps = 13/205 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG+EGAGK+T I + L + VT REPGGTP AE R ++ DE Sbjct: 4 FIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPLT 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ AAR V NVI+PAL +G+ ++ DR SS AYQG + +++ Sbjct: 64 DMAELLLLYAARAQLVGNVIKPALAKGEWVVGDRHDLSSQAYQGGGRGFDRDLMMTMRNT 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI +D+ +GL+R R L E LD+FER R+ +L+ A Sbjct: 124 VLGDFKPDLTIYMDIDPKLGLQRASARGELDRIEQMKLDFFERS--------RERYLEFA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206 N + +D+ ++V +I+ Sbjct: 176 -NSDESIITIDAGQDLETVTQSIIT 199 >gi|54297309|ref|YP_123678.1| thymidylate kinase [Legionella pneumophila str. Paris] gi|59798140|sp|Q5X5G6|KTHY_LEGPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53751094|emb|CAH12505.1| hypothetical protein lpp1354 [Legionella pneumophila str. Paris] Length = 212 Score = 98.2 bits (243), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 112/214 (52%), Gaps = 12/214 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL G+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMNMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ PD T+ LD+ ++G+ R ++R + E +++F R IH+ + Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSRGKFDRIEQESIEFFHR----IHDT----YHV 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + P+ ++D+ S V ++I +++ E ++ Sbjct: 177 LVKQNPE-IMMIDANRSLDEVQSSIQSVIEEFIE 209 >gi|148240580|ref|YP_001225967.1| thymidylate kinase [Synechococcus sp. WH 7803] gi|166223122|sp|A5GP05|KTHY_SYNPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147849119|emb|CAK24670.1| Thymidylate kinase [Synechococcus sp. WH 7803] Length = 213 Score = 97.8 bits (242), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 63/155 (40%), Positives = 88/155 (56%), Gaps = 10/155 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 G F+ EGI+G GKTT + L +L + +H+TREPGGTP A R +LL Sbjct: 3 GRFLVLEGIDGCGKTTQLRQLAEWLPDSGLMPEGATLHLTREPGGTPLGRALRELLLHP- 61 Query: 59 VDEFGA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHL 115 DE EAE +++AA R HV+ I PAL G +L DRF S+ AYQG+ R + L Sbjct: 62 PDEAAPCPEAELLMYAADRAQHVQRRILPALACGDWVLSDRFSGSTLAYQGDGRGLDRAL 121 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 LD L+ I+ ++PD T+ LDL ++ + R + R Sbjct: 122 ILD-LERIATAGLVPDVTLWLDLSLEASMARREER 155 >gi|78213888|ref|YP_382667.1| thymidylate kinase [Synechococcus sp. CC9605] gi|123577474|sp|Q3AH20|KTHY_SYNSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78198347|gb|ABB36112.1| Thymidylate kinase [Synechococcus sp. CC9605] Length = 209 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 61/150 (40%), Positives = 80/150 (53%), Gaps = 6/150 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 +G FI EGI+G GKTT I L +L K V TREPGGTP + R +LL Sbjct: 2 TGRFIVLEGIDGCGKTTQIQHLLEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61 Query: 58 GVDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E A AE +++AA R HVE +IRPAL G ++ DRF S+ AYQG Sbjct: 62 SDQEAPAPTAELMLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + L++I+ + PD T+ L L V L+R Sbjct: 122 IQRLEQIATAGLQPDITLWLRLSVQESLQR 151 >gi|212696419|ref|ZP_03304547.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM 7454] gi|212676591|gb|EEB36198.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM 7454] Length = 167 Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 59/173 (34%), Positives = 96/173 (55%), Gaps = 12/173 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GL I FEG +G+GKTT + + L + YD++ REPGGT +E R ++L + Sbjct: 2 NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA+R +E +RP L +G I+LCDRF+ SS YQG + L +D +++ Sbjct: 62 SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQG---IGRGLGIDEVKK 118 Query: 123 I---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 I ++ E+ D T+ L++ + R R++ D E +D H+K Sbjct: 119 INDFAIGEIKADLTLFLNIDYKTAIDRK------RKNFVSDRLENEDDSFHKK 165 >gi|111225913|ref|YP_716707.1| thymidylate kinase (dTMP kinase) (partial match) [Frankia alni ACN14a] gi|111153445|emb|CAJ65203.1| Thymidylate kinase (dTMP kinase) (partial match) [Frankia alni ACN14a] Length = 679 Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 74/232 (31%), Positives = 116/232 (50%), Gaps = 15/232 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLF++ EG EGAG++T + LL+ +L +V VT GGT R +L Sbjct: 447 HAGLFVAVEGAEGAGRSTQVELLRTWLAASGREVVVTSGSGGTTTGARLRELLFDPST-R 505 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++ AA R +HV VI PAL G I++ DR++DS A+Q S L L Sbjct: 506 LHARTEALLAAADRAEHVSRVIEPALARGAIVITDRYVDSWIAFQCASRSVDAAELAVLA 565 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR--------VQNRYSLRESACLDYFERKD-----VM 168 + + ++PD T++LDL D+G++R S+ E A + E D ++ Sbjct: 566 QWATHALVPDLTVLLDLSADLGMQRRPAGEPAAEPAEESVDEPAEESFREPVDEAGAELL 625 Query: 169 IHEKR-RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + R R FL +A+ +P R VD+ + + I +V V++R PL Sbjct: 626 AYRSRVRDGFLRLAQGEPARYLTVDANRPREEIHAEIRAVVASRVERRAVPL 677 >gi|15616958|ref|NP_240171.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681711|ref|YP_002468097.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682266|ref|YP_002468650.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11132949|sp|P57434|KTHY_BUCAI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|25288281|pir||A84971 dTMP kinase (EC 2.7.4.9) [imported] - Buchnera sp. (strain APS) gi|10039023|dbj|BAB13057.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621999|gb|ACL30155.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624554|gb|ACL30709.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 212 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 69/214 (32%), Positives = 109/214 (50%), Gaps = 11/214 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFG 63 FI EG+EGAGKT +K L++ + +V + R+PG TP AE R ++ D Sbjct: 6 FIVIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLI 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++ AAR+ VE I+PAL G ++ DR SS AYQG + LQ + Sbjct: 66 KETELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSL 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +PD TI LD+ +IGL R R LD E + + +K R+ +L+ ++ Sbjct: 126 FLNNFIPDLTIYLDVSPEIGLARALKRNP------LDLIESRSLFFFKKTRRCYLE--KS 177 Query: 184 QPDRCHIVDSAH-SFQSVATNILNIVWELVQKRV 216 + D+ I+ +A+ + + V NI + + K+V Sbjct: 178 KLDKKTIIINANLNIKKVTQNITKKMLNWLNKQV 211 >gi|254499174|ref|ZP_05111855.1| thymidylate kinase [Legionella drancourtii LLAP12] gi|254351608|gb|EET10462.1| thymidylate kinase [Legionella drancourtii LLAP12] Length = 212 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 64/218 (29%), Positives = 108/218 (49%), Gaps = 16/218 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I EG+EGAGK+T +S + +L R TREPGGT E R ++ G + Sbjct: 5 TGKLIVIEGLEGAGKSTAVSTVIDYLTRLEIKTITTREPGGTVIGELLRQII--KGTEYK 62 Query: 63 GA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G ++E ++ AR+ +E VI+PAL +G ++ DRF S+ AYQG + Sbjct: 63 GVLDDKSELLLLYTARIQLLEQVIKPALQQGTWVIADRFELSTMAYQGGGRGLNEQMIQQ 122 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNR--YSLRESACLDYFERKDVMIHEKRRQIF 177 L ++ PD T+ LD+ + G+KRV++R + E +D+F R +H + Sbjct: 123 LSAFALDGFKPDLTLYLDISPEEGMKRVKSRGEFDRIEQQSIDFFHR----VHSS----Y 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R P+ ++D+ V I ++ E ++ + Sbjct: 175 IHHVRTNPNAV-LIDAGLPLHEVQLAIQCVLKEFIEHK 211 >gi|171184628|ref|YP_001793547.1| dTMP kinase [Thermoproteus neutrophilus V24Sta] gi|170933840|gb|ACB39101.1| dTMP kinase [Thermoproteus neutrophilus V24Sta] Length = 204 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 20/203 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EGI+G+GK+T IS L L + V+ TREP G P + L G + Sbjct: 3 FVAIEGIDGSGKSTVISRLAEILPK----VYTTREPSGGPIGRLIKEWALRGGTVD--PH 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A++FAA R++H + P + EG I++ +R+++SS AYQG + + L+ ++ I+ Sbjct: 57 VDALLFAADRIEHYRREVEPKVREGYIVISERYVESSIAYQG----AAGVPLEFIKSINS 112 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T+ILD+ ++ + RV+ R +L + + + R R+I+L AR + Sbjct: 113 LVPRPDVTVILDVEPEVAISRVRQRGALEKYEQMAFLRRV--------REIYL--ARARE 162 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 + +VD+A + VA + IV Sbjct: 163 EGYPVVDAARPPEVVAREVAEIV 185 >gi|330943542|gb|EGH45881.1| thymidylate kinase [Pseudomonas syringae pv. pisi str. 1704B] Length = 143 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 7/145 (4%) Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 +VFAA R H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ ++ Sbjct: 2 LVFAA-RAQHLAEVIRPALTRGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQFVQGDL 60 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD T++ DLPV+IGL R R LD FE++ + R +L+ A +P R Sbjct: 61 RPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRTFFDAVRSTYLERANAEPARY 114 Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213 +VD+ + V ++ ++ +L++ Sbjct: 115 RLVDAGQTLADVQASLDTLLPQLLE 139 >gi|327393492|dbj|BAK10914.1| thymidylate kinase Tmk [Pantoea ananatis AJ13355] Length = 211 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT + L+ D + TREPGGTP AE R VL+ G++ + Sbjct: 5 FIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLR-VLVKQGIEGEQV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 TDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ + GL+R + R LD E++ + E+ R+ +L +A Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALA- 176 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 D +D+ + V + + Sbjct: 177 AADDSILTIDATQPLEQVTSAL 198 >gi|154151261|ref|YP_001404879.1| thymidylate kinase [Candidatus Methanoregula boonei 6A8] gi|153999813|gb|ABS56236.1| dTMP kinase [Methanoregula boonei 6A8] Length = 206 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 20/212 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+G+GK+T ++ LK L+ + TREPG T ++ R + ++ Sbjct: 2 VLVTLEGIDGSGKSTLLAALKESLE--DLSPVFTREPGATWVGDSVRRAI----AEQIDP 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFLDSL 120 EA +F A H+ V+RPAL E K+++ DR+ DS +AYQ +L ++ Sbjct: 56 VCEATLFVADHAAHLATVVRPALAEHKLVISDRYSDSRFAYQAVTLEGVIPEPERWLRAM 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++PD T +L +P+D L R+ + S RE +FER+DV+ EK + +++ Sbjct: 116 HD--GWSIVPDKTFLLAIPIDDALARLSKK-SGRE-----HFERRDVL--EKVQNRYMEF 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 AR +PDR IVDS +VA + + ++V Sbjct: 166 ARAEPDRFVIVDSMLDKDAVAEFVAGAIRQVV 197 >gi|317968090|ref|ZP_07969480.1| thymidylate kinase [Synechococcus sp. CB0205] Length = 214 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 61/165 (36%), Positives = 90/165 (54%), Gaps = 6/165 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58 G F+ EGI+G GKTT I LK++L + + VTREPGGT +A R +LL Sbjct: 5 GRFLVLEGIDGCGKTTQIEALKQWLPSSGLMPEGAQLLVTREPGGTALGQALRQLLLHPP 64 Query: 59 VDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D + AE +++AA R HV+ I PAL G +L DRF+ S+ AYQG + Sbjct: 65 GDAAPESTAELLLYAADRAQHVQQRIAPALEAGHWVLSDRFVGSTAAYQGYGRGLSLALI 124 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + L I+ + PD T++L++P+ L+R +R + R A + F Sbjct: 125 EQLAGIATAGLEPDLTVLLEIPLAESLRRRGHRPADRIEASGEAF 169 >gi|291617041|ref|YP_003519783.1| Tmk [Pantoea ananatis LMG 20103] gi|291152071|gb|ADD76655.1| Tmk [Pantoea ananatis LMG 20103] Length = 211 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 11/202 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI EG+EGAGKTT + L+ D + TREPGGTP AE R VL+ G++ + Sbjct: 5 FIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLR-VLVKQGIEGEQI 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 TDKAELLMLYAARVQLVETVIKPALARGPGVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ + GL+R + R LD E++ + E+ R+ +L +A Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 D +D+ + V + + Sbjct: 178 AD-DSILTIDATQPLEQVTSAL 198 >gi|308049573|ref|YP_003913139.1| thymidylate kinase [Ferrimonas balearica DSM 9799] gi|307631763|gb|ADN76065.1| thymidylate kinase [Ferrimonas balearica DSM 9799] Length = 207 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 109/208 (52%), Gaps = 12/208 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGV 59 G FI EG+EGAGK+T I+++ ++L+++ + + TREPGGTP AE R + Sbjct: 3 EQGTFIVIEGLEGAGKSTAIAVVDQYLKQRFPEREIVHTREPGGTPLAEEIRAIWKQPRE 62 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLD 118 + E ++ A R VE+VI+PAL G I++ DR SS AYQ G R ++ + Sbjct: 63 EAMAPMTELLMVYACRAQLVESVIKPALARGAIVVGDRHDLSSKAYQGGGRGLAEPVA-- 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L +++ + PD T+ LD+ +GL R + R LD E++ + ++ R + Sbjct: 121 RLSALTLGDFAPDLTLYLDIDPAVGLARARARGE------LDRIEQEALAFFQRARATYQ 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILN 206 A P R +D+ S + V +++N Sbjct: 175 AEAAADP-RIVTIDAGQSLEQVHQSLIN 201 >gi|33866768|ref|NP_898327.1| thymidylate kinase [Synechococcus sp. WH 8102] gi|46576438|sp|Q7U437|KTHY_SYNPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33639369|emb|CAE08753.1| Thymidylate kinase [Synechococcus sp. WH 8102] Length = 209 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/153 (37%), Positives = 82/153 (53%), Gaps = 6/153 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 SG FI +GI+G GK+T + L +L ++ TREPGGTP + R +LL Sbjct: 2 SGRFIVLDGIDGCGKSTQLDHLLGWLPGSGLMPAGAELISTREPGGTPLGRSVRELLLHT 61 Query: 58 GVDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ A AE +++AA R HVE +I P L G ++ DRF S+ AYQG Sbjct: 62 RAEQAPAPTAELLLYAADRAQHVERLILPTLERGDWVISDRFSGSTMAYQGYGRGLDRQL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 +D L+ I+ V PD T+ L LP++ L+R Q Sbjct: 122 IDQLERIATAGVQPDLTLWLTLPLEESLRRRQG 154 >gi|56751420|ref|YP_172121.1| thymidylate kinase [Synechococcus elongatus PCC 6301] gi|56686379|dbj|BAD79601.1| thymidylate kinase [Synechococcus elongatus PCC 6301] Length = 177 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 87/176 (49%), Gaps = 8/176 (4%) Query: 35 VHVTREPGGTPAAEAARHVLLS--CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92 + TREPG T +A R +LL+ AE +++AA R HVE V+RP L G + Sbjct: 2 IVATREPGDTALGQALRSLLLTQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAV 61 Query: 93 LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 ++CDR++DS+ AYQG + L ++ + D T+ LDLPV I +R Q R Sbjct: 62 VVCDRYVDSTVAYQGYGRGLDQSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQARGQ 121 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D E + E+ RQ F IA +PDR +D+A VA I +V Sbjct: 122 ------GDRMEAAGLAFQERLRQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVV 171 >gi|71892180|ref|YP_277912.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123640937|sp|Q492Q6|KTHY_BLOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71796286|gb|AAZ41037.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 212 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/203 (32%), Positives = 107/203 (52%), Gaps = 12/203 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DE 61 FI+ EG++GAGKTT + ++L Q D+ T EPGGTP ++ R VL+ G + Sbjct: 5 FITIEGLDGAGKTTITHRVSKYLNQYGVTDILTTHEPGGTPVSDFLR-VLIKYGGPMNEP 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +E ++ AARL +ENVI+PAL +G ++ DRF SS AYQG L L +L Sbjct: 64 INSISELLMIYAARLQLIENVIKPALSKGYWVIGDRFDLSSQAYQGGGRGIDILLLHALS 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ ++ + R+ +R LD E++ + ++ R + +A Sbjct: 124 NKITNTLSPDLTFYLDISPELSISRINHRQK------LDRIEQEPLSFFDRVRSCYKKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 + + I D+ S + V+ +I Sbjct: 178 SERKNIITI-DATQSLEEVSMSI 199 >gi|304413841|ref|ZP_07395258.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus Regiella insecticola LSR1] gi|304283561|gb|EFL91956.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus Regiella insecticola LSR1] Length = 603 Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 93/176 (52%), Gaps = 8/176 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CG 58 M +G FI EG+EGAGKTT + + L+ D+ REPGGTP AE R ++ Sbjct: 387 MITGKFIVIEGLEGAGKTTAGETVAQVLRANGINDIVQPREPGGTPVAEKLRELIKQRID 446 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D +AE ++ AAR+ +ENVI+PAL G ++ DR SS AYQG + Sbjct: 447 SDPLTDKAEVLMLYAARVQLIENVIKPALARGTWVVGDRHDLSSQAYQGGGRDVDSKLMT 506 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEK 172 SL++ + PD T+ LD+ + GL RV+ R S E L +F R +HE+ Sbjct: 507 SLRDSLLGSFRPDLTLYLDISPEQGLARVRLRGSPDRIEQESLAFFTR----VHER 558 >gi|288575015|ref|ZP_06393372.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570756|gb|EFC92313.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 213 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 59/151 (39%), Positives = 82/151 (54%), Gaps = 3/151 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFIS EGI+G GK+T LL+ L+ + V +T+EPG R +LL G D Sbjct: 10 SGLFISLEGIDGCGKSTQAMLLRDHLEERGRSVVLTKEPGDWSHGGEIRRILL--GGDLR 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +F A R +H+ V+ PAL G I++CDR+ DS+ AYQ F++ L Sbjct: 68 HEHTELFLFMADRCEHLLQVVIPALDRGDIVICDRYTDSTLAYQCFGRGLDPTFVEGLFN 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 S V PD T +D+P+ L R+ +R SL Sbjct: 128 WSDFPV-PDVTFWIDVPLSCSLGRISSRGSL 157 >gi|299136794|ref|ZP_07029977.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8] gi|298601309|gb|EFI57464.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8] Length = 221 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 7/217 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G FI+FEG++G+GKTT + L L+ + V R+PGGT + R VLL + Sbjct: 1 MSRGFFITFEGLDGSGKTTQLRRLAAALEAEGLRVVTLRQPGGTALGDRIRSVLLDSRTE 60 Query: 61 -EFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G AE + A R + +VI PAL EG ++LCDR+ DSS AYQG Sbjct: 61 SELGGIAPTAEMALMFADRAQSLAHVIHPALAEGAVVLCDRYTDSSEAYQGAGRGLGSER 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKR 173 + ++ P+ TI+L P++ L R + R + FER+ + + Sbjct: 121 IRAMHTAVCDGFQPELTILLLPPLEGSLARARRRNERNVRTRGTDENRFEREGDEFYRRI 180 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +++IAR +R + S +++A I IV E Sbjct: 181 YDQYVEIARRDSERVVTIAEEASIETIAERIRAIVRE 217 >gi|315179582|gb|ADT86496.1| thymidylate kinase [Vibrio furnissii NCTC 11218] Length = 209 Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS +I EG+EGAGK+T I + L D+ TREPGGT AE R ++ Sbjct: 1 MNSK-YIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDMTELLLMYAARVQLVENVIKPALQQGHWVVGDRHDMSSQAYQGGGRQIARETMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + +++ S + V +I Sbjct: 174 ELAAG-DESVVTINAEQSIEQVTHDI 198 >gi|126465530|ref|YP_001040639.1| thymidylate kinase [Staphylothermus marinus F1] gi|166223119|sp|A3DM71|KTHY_STAMF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|126014353|gb|ABN69731.1| thymidylate kinase [Staphylothermus marinus F1] Length = 199 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 59/146 (40%), Positives = 83/146 (56%), Gaps = 10/146 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N+G F+ EGI+GAGKT+ L+ FL K ++VH T EP T EA L +E Sbjct: 4 NNGFFLVLEGIDGAGKTSIAFKLRDFLVEKGFNVHYTYEPYNTLYVEA-----LKKKYNE 58 Query: 62 F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +A+ +AA RL H+ I P L G I++CDR+ SS AYQ S+Q ++ + Sbjct: 59 YRDAYLDALTYAADRLVHIRTEILPYLRRGYIVICDRYYYSSAAYQ----SAQGAPIEWV 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146 EI+ + PD TI LD+ IG+KR Sbjct: 115 LEINKYALKPDLTIYLDVDPAIGVKR 140 >gi|33239604|ref|NP_874546.1| thymidylate kinase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|46576462|sp|Q7VE61|KTHY_PROMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33237129|gb|AAP99198.1| Thymidylate kinase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 220 Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 7/153 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58 G+F+ EGI+G GK+T I L ++L + +TREPGGT ++ R +LL Sbjct: 3 GIFLVLEGIDGCGKSTQIEHLAQWLPLSGLMPSAAKLFITREPGGTRLGKSLRQLLLGTS 62 Query: 59 VDEFGAE--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + E +++AA R HV VI+P + G ++ DRF S+ AYQG Sbjct: 63 PTDESPKPLTELLLYAADRAQHVSQVIQPKINNGDWVISDRFSSSTLAYQGFGRRLDKSL 122 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 + L+ I+ Q + PD T +L++PV +KR +N Sbjct: 123 IKELENIATQGITPDLTFLLEIPVSESIKRREN 155 >gi|307354495|ref|YP_003895546.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] gi|307157728|gb|ADN37108.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] Length = 206 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 22/223 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G GK+T + LK L + D TREPG T EA R + + G+D Sbjct: 1 MLITIEGIDGTGKSTLVENLKGLLS--DLDPVFTREPGSTWIGEAVRRGI-AEGIDPV-- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 AEA++F A H+E VIRP L EG+I++ DR+ DS YAYQ + + + D ++ + Sbjct: 56 -AEALLFTADHAAHLETVIRPQLEEGRIIISDRYSDSRYAYQA--STLKGILPDPMKWMK 112 Query: 124 SVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S+ E ++P+ T +L +PV+ ++R+ + +E +FE + E+ + +L + Sbjct: 113 SIHEGWTIVPELTFLLVIPVEDAVERLNKNRTHQE-----HFECASTL--EEVKNNYLVL 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 A P+R +VD++ +A + E+ +K S SKK Sbjct: 166 AEEDPERFILVDASLDTDEIAEFVAG---EIRKKAESKNKSKK 205 >gi|305663476|ref|YP_003859764.1| thymidylate kinase [Ignisphaera aggregans DSM 17230] gi|304378045|gb|ADM27884.1| thymidylate kinase [Ignisphaera aggregans DSM 17230] Length = 203 Score = 95.1 bits (235), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 70/211 (33%), Positives = 112/211 (53%), Gaps = 18/211 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI EGI+GAGKTT +L L+R Y T EP T E L S G+ Sbjct: 7 GLFIVLEGIDGAGKTTIAKMLLDDLERNGYRTIYTFEPWTTRFVED----LKSLGMRR-D 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +A+++AA RL HV+ VI PA+ +G I++CDR+ SS AYQ S+ + +D + + Sbjct: 62 AYIDALIYAADRLVHVKEVIEPAIRDGYIVVCDRYFYSSVAYQ----SAMGVPMDWIITL 117 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD I LD+ +IG+ R + Y R + E ++ I K R+I+L++ R Sbjct: 118 NMFALKPDLAIYLDVEPEIGIARKRG-YKSR------FPEYEEYGILRKAREIYLEMVRR 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + V ++ NIV+ +++ Sbjct: 171 --NMLVYIYAGRDIGDVYRDVRNIVYRAIEQ 199 >gi|330984099|gb|EGH82202.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 214 Score = 94.7 bits (234), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 6/209 (2%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN GL I +G G K+T + L + L + ++V T EPGGTP E R + S Sbjct: 1 MNKKGLVICIDGSNGGFKSTTLKALAQHLSSQGHEVICTAEPGGTPIGEKIRVLTRSPEN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + ++FAAAR +VE VIRPA+ G I L DRF SS A+Q + Sbjct: 61 SEMSPLSNMLLFAAARAQNVEQVIRPAIERGCICLVDRFSSSSRAFQHAGQGMPLSLVSE 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + I+ V D T+I DL +GL+R A D FE ++ R +L Sbjct: 121 IDAIARDGVAADYTLIFDLDPKLGLERNGG-----GKAADDKFELTGFEFLDRVRADYLV 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P+R ++D++ ++ V + + V Sbjct: 176 QAAEAPERFEVIDASRPYEQVLKSAIEAV 204 >gi|311697051|gb|ADP99924.1| thymidylate kinase-like protein [marine bacterium HP15] Length = 139 Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 83/148 (56%), Gaps = 13/148 (8%) Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQE 127 ++ +AAR DHV +VIRPAL G+ ++ DRF+DS+YA Q D+ HL S ++I V Sbjct: 1 MLVSAARFDHVRSVIRPALASGQWVISDRFIDSTYALQVAVSDADLHLLFRSTRDIVVGP 60 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLDIARNQPD 186 +PD TIILDLP+ + R R LD E +D + R+ + +A +P+ Sbjct: 61 TLPDLTIILDLPLAVA----HGRREQRRDGVLDPAEAARDFAVI---REALIAVAHQEPE 113 Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214 RCH++D+ S VA +I W LV+ Sbjct: 114 RCHVIDANQSPDGVARDI----WRLVEP 137 >gi|297526188|ref|YP_003668212.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710] gi|297255104|gb|ADI31313.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710] Length = 199 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 19/210 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G F+ EGI+GAGKT+ L FL K + VH T EP T EA L DE Sbjct: 4 SNGFFLVLEGIDGAGKTSIAFKLMDFLVEKGFSVHYTYEPYDTLYVEA-----LKKKYDE 58 Query: 62 F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +A+ +AA RL H+ I P L G +++CDR+ SS AYQ S+Q ++ + Sbjct: 59 YRDAYLDALTYAADRLVHIRTDILPYLRRGYVVICDRYYYSSAAYQ----SAQGAPIEWV 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 EI+ + PD TI LD+ IG+KR RE + E + + K R+ +L + Sbjct: 115 LEINKYALKPDLTIYLDVDPHIGVKR-------REGLNTRFPEYEKLDFLYKVRENYLWL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +VD+ F V ++ IV+E Sbjct: 168 VKKG--YMVLVDANREFDKVYRDVEKIVFE 195 >gi|124024337|ref|YP_001018644.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9303] gi|166223100|sp|A2CD19|KTHY_PROM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123964623|gb|ABM79379.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9303] Length = 216 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/169 (36%), Positives = 90/169 (53%), Gaps = 7/169 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 SG + EGI+G GKTT + L +L R + +H+TREPGGT A R ++L Sbjct: 2 SGRLLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGMALRKLVLHP 61 Query: 58 GVDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D AE +++AA R HV +IRPAL +G +L DRF S+ AYQG Sbjct: 62 PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 + L++I+ ++PD T L+L V+ L R R + R E+ +D+ R Sbjct: 122 IQQLEQIATAGLVPDLTFWLELSVEESLVRRDARSNDRIEAEGVDFLTR 170 >gi|18312312|ref|NP_558979.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2] gi|23821790|sp|Q8ZY35|KTHY_PYRAE RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|18159759|gb|AAL63161.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2] Length = 192 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 26/211 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFGA 64 F++ EGI+G+GK+T ISLL++ L R V+ TREP P + L G VD Sbjct: 3 FVAIEGIDGSGKSTVISLLEKKLPR----VYATREPSSGPIGRLIKEWALKGGSVD---P 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSLQE 122 +A++FAA R++H + I P + EG I++ +R+++SS AYQG S+ +++SL Sbjct: 56 HVDALLFAADRIEHYKREIEPRVREGYIVISERYIESSIAYQGAAGVSREFVKYINSLVP 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD TIILD+ I R++ R + L + K R+I+L AR Sbjct: 116 ------KPDLTIILDVDPSIAEARIRQRGGAEKYEYLSFL--------RKVREIYL--AR 159 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++D++ + VA ++ ++ +V+ Sbjct: 160 AAEEGYPVIDASRRPEEVAADVAELIKRVVR 190 >gi|255348545|ref|ZP_05380552.1| thymidylate kinase [Chlamydia trachomatis 70] gi|255503085|ref|ZP_05381475.1| thymidylate kinase [Chlamydia trachomatis 70s] gi|255506763|ref|ZP_05382402.1| thymidylate kinase [Chlamydia trachomatis D(s)2923] gi|289525226|emb|CBJ14702.1| thymidylate kinase [Chlamydia trachomatis Sweden2] gi|296434774|gb|ADH16952.1| thymidylate kinase [Chlamydia trachomatis E/150] gi|296438494|gb|ADH20647.1| thymidylate kinase [Chlamydia trachomatis E/11023] Length = 203 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 67/191 (35%), Positives = 99/191 (51%), Gaps = 9/191 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG GKT I L + L + ++ TREPGG ++ R +LL + Sbjct: 1 MFIVVEGGEGGGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDPE-QKISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 AE ++F AAR H++ I PAL GK ++ DRF DS+ YQG F+ +L Sbjct: 60 YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + +PD T +LD+P GL R + LD FE+K + H+ R+ FL +A Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173 Query: 183 NQPDRCHIVDS 193 PDR ++D+ Sbjct: 174 KAPDRYKVLDA 184 >gi|229100819|ref|ZP_04231634.1| Thymidylate kinase [Bacillus cereus Rock3-28] gi|228682586|gb|EEL36648.1| Thymidylate kinase [Bacillus cereus Rock3-28] Length = 174 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 10/174 (5%) Query: 38 TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97 TREPGG +E R +L A EA+++AAAR H+ + PAL E ++LCDR Sbjct: 3 TREPGGIAISEDIRTILHKQEYTMMEARTEALLYAAARRQHLVEKVMPALNENYLVLCDR 62 Query: 98 FLDSSYAYQGERDSSQHLFLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 F+DSS AYQG ++ L +D + EI + ++ MP TI LD+ ++GL R++ + + R Sbjct: 63 FIDSSLAYQG---YARGLGMDKVFEINRFATEDCMPSVTIYLDIEPEVGLARIE-KDAGR 118 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 E LD +D+ H++ R+ +L + DR +V++ + + ++ I+ Sbjct: 119 EVNRLDM---EDISFHKRVREGYLQVVERFSDRIVLVNADQPMEKLIEEVVQII 169 >gi|87301810|ref|ZP_01084644.1| Thymidylate kinase [Synechococcus sp. WH 5701] gi|87283378|gb|EAQ75333.1| Thymidylate kinase [Synechococcus sp. WH 5701] Length = 224 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/168 (36%), Positives = 92/168 (54%), Gaps = 7/168 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58 G F+ EGI+G+GK++ + L +L R + +REPGGTP + R +LL Sbjct: 9 GRFLVLEGIDGSGKSSQLERLAAWLPRSGLMPAGASLVTSREPGGTPLGQGLRQLLLHPP 68 Query: 59 VDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + A AE +++AA R HV+++I PAL G +L DRF S+ AYQG + Sbjct: 69 EEAAPVARAELLLYAADRAQHVQSLIEPALAAGHWVLSDRFAGSTAAYQGHGRGLSLDLI 128 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 D L+ I+ + PD T+ LDLP+ I R +R + R E+A L + ER Sbjct: 129 DQLEAIATGGLSPDLTLWLDLPLAISADRRGHRGADRIEAAGLPFLER 176 >gi|325967673|ref|YP_004243865.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28] gi|323706876|gb|ADY00363.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28] Length = 199 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 13/204 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++ EGI+G GK+T IS+L++ L+ Y V+ T EP +P R LL + Sbjct: 1 MFVAVEGIDGVGKSTVISMLRKKLESNGYRVYTTAEPSQSPIGRLIRDWLLKPSSNAAHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++F A R+ H ++P L G +++ +R+++S+ AYQG Q + L E+ Sbjct: 61 SIFALLFTADRVQHYYGEVKPKLDSGYLVITERYMESTLAYQGAMGLPQ----EWLMELH 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD TIILD P++ + R+ NR RE L+ FE + + R FL + R Sbjct: 117 RFVPRPDLTIILDAPIETVIGRLSNR---RE---LEVFEVNKEFLSKVRE--FL-LRRAS 167 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 + ++++ +S+ +I ++ Sbjct: 168 TNNYPVINADRDLESIVNDIYELI 191 >gi|117621308|ref|YP_856780.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|254808271|sp|A0KKH9|KTHY_AERHH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|117562715|gb|ABK39663.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 213 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/200 (31%), Positives = 103/200 (51%), Gaps = 8/200 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG+EGAGK++ + + +L + TREPGGTP AE R ++ + Sbjct: 4 FIVIEGLEGAGKSSAVRYVADYLHGHGVARIECTREPGGTPLAERMRAIVKEVHDERLTI 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A+R+ VE I+PAL +G ++ DR SS AYQG + +++ Sbjct: 64 EAELLLMYASRVQLVETRIKPALADGIWVVGDRHDLSSQAYQGGGRGIDANLIGAIKRAV 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD T+ LD+ IGL+R ++R LD E + + E+ RQ +L++A Sbjct: 124 LGDFKPDLTLYLDIDPAIGLQRARHR------GELDRIELEQLSFFERTRQRYLELAAAD 177 Query: 185 PDRCHIVDSAHSFQSVATNI 204 + ++D+ + + V I Sbjct: 178 -ESIKVIDAGQAPEQVKAAI 196 >gi|167972275|ref|ZP_02554552.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167974298|ref|ZP_02556575.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|167975305|ref|ZP_02557582.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|167988964|ref|ZP_02570635.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168362382|ref|ZP_02695561.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|198273573|ref|ZP_03206109.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554298|ref|YP_002284433.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550427|ref|ZP_03771376.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551319|ref|ZP_03772265.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903215|gb|EDT49504.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209431|gb|EDU06474.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018690|gb|EDU56730.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998196|gb|EDU67293.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660019|gb|EDX53399.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198250093|gb|EDY74873.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541799|gb|ACI60028.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379134|gb|EEH01499.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379581|gb|EEH01943.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 229 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 12/199 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSCGV 59 GLFI FEGI+GAGKT+ + L L+ + +TREPGG AAE R L + Sbjct: 15 GLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK-NL 73 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + F A ++A++R +HV+ I P L +G I++ DRF+ SSY YQG + + Sbjct: 74 EAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVIHH 133 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ + D D+ V+ L R++NR+ + F+ ++ +EK + + Sbjct: 134 VNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQYPS 188 Query: 180 I--ARNQPDRCHIVDSAHS 196 + A NQP + +D+ S Sbjct: 189 VFNAYNQPKKIIFIDANKS 207 >gi|195867423|ref|ZP_03079427.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660899|gb|EDX54152.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 230 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 12/199 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSCGV 59 GLFI FEGI+GAGKT+ + L L+ + +TREPGG AAE R L + Sbjct: 16 GLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK-NL 74 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + F A ++A++R +HV+ I P L +G I++ DRF+ SSY YQG + + Sbjct: 75 EAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVIHH 134 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ + D D+ V+ L R++NR+ + F+ ++ +EK + + Sbjct: 135 VNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQYPS 189 Query: 180 I--ARNQPDRCHIVDSAHS 196 + A NQP + +D+ S Sbjct: 190 VFNAYNQPKKIIFIDANKS 208 >gi|262366245|gb|ACY62802.1| thymidylate kinase [Yersinia pestis D182038] Length = 190 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 10/173 (5%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 12 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 70 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP +GL R + R Sbjct: 71 WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 129 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 LD E++ + E+ R +L++A + +D++ + V+ +I Sbjct: 130 -----GELDRIEQESLAFFERTRARYLELAASDAS-IKTIDASQPIEQVSASI 176 >gi|254425294|ref|ZP_05039012.1| thymidylate kinase [Synechococcus sp. PCC 7335] gi|196192783|gb|EDX87747.1| thymidylate kinase [Synechococcus sp. PCC 7335] Length = 237 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 28/201 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNYD----------VHVTREPGGTPAAEAARH 52 G I FEG EG GKTT + L ++ Q K++ V +TREPGGT + R Sbjct: 3 GKLIVFEGGEGCGKTTQLQRLYDWIVQNKSWQLLLSKGHVAGVKMTREPGGTVLGKQLRQ 62 Query: 53 VLLSC-----------GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS 101 +LL+ + +AE +++AA R HVE V+ P L G +LCDR++DS Sbjct: 63 LLLNESKLNEPRSANDALTPVTNKAELLLYAADRAQHVEEVLLPWLEAGYWVLCDRYIDS 122 Query: 102 SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + AYQG + +L +I+ + D T+ L++P ++GL R +R D Sbjct: 123 TVAYQGYGRQLDLSLITTLNQIATAGLRGDLTLWLNVPPEVGLDR------MRARGQADR 176 Query: 162 FERKDVMIHEKRRQIFLDIAR 182 E+ + H++ F +A+ Sbjct: 177 IEQASMAFHQRVHDGFAMLAK 197 >gi|158312172|ref|YP_001504680.1| dTMP kinase [Frankia sp. EAN1pec] gi|158107577|gb|ABW09774.1| dTMP kinase [Frankia sp. EAN1pec] Length = 709 Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 76/233 (32%), Positives = 108/233 (46%), Gaps = 29/233 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+ EG GAGKTT + LL+ +L +V E GT R LL + Sbjct: 466 HGGLFITVEGAAGAGKTTQLELLRSWLSSSGREVVPAYETDGTSLGAGLRD-LLDDPANR 524 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDS 119 A E ++ AA R +HV VI PAL G I+L DR++DS+ A Q G+R S L + Sbjct: 525 LHARTELLLDAADRAEHVARVIEPALARGAIVLTDRYVDSAIACQALGQRIDSDELTV-- 582 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL-RES-----------------ACLDY 161 L + + ++PD TI+LDLP + L R + L RES Sbjct: 583 LTQWASHSLLPDVTILLDLPAEQALARGGSDPHLGRESEGDGSGHDGGAGRGGGAGHGAG 642 Query: 162 FERKD------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +R V H + R+ F +A PDR I+D+ S Q + I ++ Sbjct: 643 PDRSGTDPVAAVAYHRRVREHFRRLADEDPDRHVILDATLSPQELHRQIRAVI 695 >gi|257471409|ref|ZP_05635408.1| thymidylate kinase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|311086090|gb|ADP66172.1| thymidylate kinase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086664|gb|ADP66745.1| thymidylate kinase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087767|gb|ADP67846.1| thymidylate kinase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 219 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 11/211 (5%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEA 66 EG+EGAGKT +K L++ + +V + R+PG TP AE R ++ D E Sbjct: 16 IEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKET 75 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E ++ AAR+ VE I+PAL G ++ DR SS AYQG + LQ + + Sbjct: 76 ELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFLN 135 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 +PD TI LD+ +IGL R R LD E + + +K R+ +L+ +++ D Sbjct: 136 NFIPDLTIYLDVSPEIGLARALKRNP------LDLIESRSLFFFKKTRRCYLE--KSKLD 187 Query: 187 RCHIVDSAH-SFQSVATNILNIVWELVQKRV 216 + I+ +A+ + + V NI + + K+V Sbjct: 188 KKTIIINANLNIKKVTQNITKKMLNWLNKQV 218 >gi|87125181|ref|ZP_01081027.1| Thymidylate kinase [Synechococcus sp. RS9917] gi|86166950|gb|EAQ68211.1| Thymidylate kinase [Synechococcus sp. RS9917] Length = 217 Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/193 (32%), Positives = 93/193 (48%), Gaps = 8/193 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLL 55 + G + EGI+G GKTT + L +L TREPGGT +A R +LL Sbjct: 3 IQRGRLLVLEGIDGCGKTTQMEHLATWLPVSGLMPSTARLIQTREPGGTALGQALRGLLL 62 Query: 56 SCGVDEFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 ++ +AA R HV VIRPAL G +L DRF S+ AYQG Sbjct: 63 HPPEAAAPEAVAELLLYAADRAQHVAQVIRPALERGDWVLSDRFTGSTMAYQGFGRQLDQ 122 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER-KDVMIHEK 172 + L I+ + PD T+ L LPV + ++R R + R E++ LD+ +R D + Sbjct: 123 ALIRQLALIATGGLTPDLTVWLSLPVAVSVERRGGRRADRIEASGLDFLQRVADGFAAQA 182 Query: 173 RRQIFLDIARNQP 185 Q +L++ ++P Sbjct: 183 AEQGWLEVRADRP 195 >gi|301167072|emb|CBW26651.1| putative thymidylate kinase (dTMP kinase) [Bacteriovorax marinus SJ] Length = 229 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 17/217 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+SFEGIEGAGK+T I K +L+ + + V + REPGGTP E R +L+ E Sbjct: 21 FFLSFEGIEGAGKSTQIISAKEYLESQGFRVLILREPGGTPFGEKLRQAILNSK-SELEP 79 Query: 65 EAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SL 120 +EA +FA++R + V L G +++ DR+LDSS AYQG ++ L +D ++ Sbjct: 80 ISEAYLFASSRAQLLTEVTLKELNTPGTVVIYDRYLDSSIAYQG---IARGLGVDNILNI 136 Query: 121 QEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + ++P T L + + G +RV+N A DYFE + ++ Q + Sbjct: 137 HNVFPLNLIPHKTFYLKISTETSFGRQRVRN-------APKDYFESRGKDFYDNLVQGYE 189 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R ++D S V +I + L+ KR Sbjct: 190 LSCELFPERISVIDGNRSLDDVFADIKEELNHLIFKR 226 >gi|325290200|ref|YP_004266381.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271] gi|324965601|gb|ADY56380.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271] Length = 210 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 97/168 (57%), Gaps = 14/168 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FI EG +G+G +T +LLKR+++ K+ V + +EP P R VL + V Sbjct: 7 SGKFIVLEGTDGSGISTQSALLKRYIENKHGKKVLLAKEPSEGPIGTLIRQVL-THRVQG 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E+ ++FAA R+DH+++ I PAL +G +++CDR++ SS+AYQG + Q + Sbjct: 66 IREESLTLMFAADRMDHLQHKIIPALEQGALVICDRYVWSSFAYQGIKIDEQWIL----- 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVM 168 E + + PD TI + + + ++R+ QNR+ +D FE++ ++ Sbjct: 121 ETNKYALKPDLTIFVKVRPQVSMERIRQNRFQ------IDVFEQEVIL 162 >gi|269792630|ref|YP_003317534.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100265|gb|ACZ19252.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 205 Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 63/169 (37%), Positives = 91/169 (53%), Gaps = 11/169 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GLF++ EG++G+GKTT S L ++ + V TREPGG + R +LL G Sbjct: 1 MPRGLFVTIEGVDGSGKTTQASKLASWIGDQLGRRVLWTREPGGW-GDDGIREMLLKGGW 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G E ++F A R +H VI PAL EG++++C+R+ DS+ AYQ L L+ Sbjct: 60 Q--GPYTETLLFLADRCEHCARVIGPALEEGRVVICERYQDSTLAYQA---FGSGLGLED 114 Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 L IS + PD TI LDL + R+ +R + ES +D+F R Sbjct: 115 LDRISSVLALPRPDVTIWLDLGPEEAALRLSSRGGMDAIESRGMDFFAR 163 >gi|311087248|gb|ADP67328.1| thymidylate kinase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 219 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 11/211 (5%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEA 66 EG+EGAGKT +K L++ + +V + R+PG TP AE R ++ D E Sbjct: 16 IEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKET 75 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E ++ AAR+ VE I+PAL G ++ DR SS AYQG + LQ + + Sbjct: 76 ELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFLN 135 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 +PD T+ LD+ +IGL R R LD E + + +K R+ +L+ +++ D Sbjct: 136 NFIPDLTVYLDVSPEIGLARALKRNP------LDLIESRSLFFFKKTRRCYLE--KSKLD 187 Query: 187 RCHIVDSAH-SFQSVATNILNIVWELVQKRV 216 + I+ +A+ + + V NI + + K+V Sbjct: 188 KKTIIINANLNIKKVTQNITKKMLNWLNKQV 218 >gi|288932600|ref|YP_003436660.1| thymidylate kinase [Ferroglobus placidus DSM 10642] gi|288894848|gb|ADC66385.1| thymidylate kinase [Ferroglobus placidus DSM 10642] Length = 204 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 25/215 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ EGI+GAGKTT + ++ L + V +EP E ++ F E Sbjct: 3 LIAVEGIDGAGKTTIANFVREELLKLGIPAIVLKEP-----TEGKYGKIIKESEKRFDPE 57 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +F R + VE I PAL +G ++ DR+ SS AYQG R LD + + V Sbjct: 58 KELELFILDRKEDVEKNILPALNKGISVIMDRYYYSSVAYQGARG------LDPEEILKV 111 Query: 126 QEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E + PD TIILD+ +I LKR++NR L L+Y +K R+IFL I R Sbjct: 112 NESIAPVPDLTIILDVEPEIALKRIKNRKKLTPFEELEYL--------KKVREIFLSIKR 163 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +VD++ S + V ++ V EL+ R S Sbjct: 164 PE---IRVVDASKSLEEVKDEVIYHVLELLSSRGS 195 >gi|77407435|ref|ZP_00784304.1| thymidylate kinase [Streptococcus agalactiae H36B] gi|77173956|gb|EAO76956.1| thymidylate kinase [Streptococcus agalactiae H36B] Length = 117 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 1/108 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 + + E +++ AAR H+ + PAL E +I+L DRF+DSS AYQG Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEREIVLMDRFIDSSVAYQG 108 >gi|123351693|ref|XP_001295357.1| thymidylate kinase family protein [Trichomonas vaginalis G3] gi|121874114|gb|EAX82427.1| thymidylate kinase family protein [Trichomonas vaginalis G3] Length = 202 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 12/207 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GK+T +L+ L + N + TREPGGT +E R ++L ++E Sbjct: 3 VFITFEGPDGSGKSTICNLVYDELIKNNIETIKTREPGGTRISEKIRDIILDKDLNEMDM 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++++A+R H I PAL +G +LC+R++ SS AYQG + + ++ + + Sbjct: 63 RTEALLYSASRAQHTYEKIIPALEDGITVLCERYVLSSLAYQGHARGQKLEDIRAINDFA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLDIARN 183 PD I R N R + AC D E + H+K R + D+ + Sbjct: 123 TGGKNPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNDLEK- 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 + +D + + V + + I+ E Sbjct: 173 -EGNYYFIDVNQTIEEVFGDCMKILKE 198 >gi|13357576|ref|NP_077850.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|6898965|gb|AAF30425.1|AE002101_8 thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970] Length = 233 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 24/205 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGG--TPAAEAARHV 53 + GLFI FEGI+GAGKT S+LK+ L+ + + +TREPGG AAE R Sbjct: 16 LKKGLFIVFEGIDGAGKT---SILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREF 72 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 L ++ F A ++A++R +HV+ I P L + I++ DRF+ SSY YQG Q Sbjct: 73 FLK-NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQG---IVQ 128 Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + LD + +I+ Q E+ D D+ V+ L R++NR+ + F+ ++ + Sbjct: 129 NQSLDVIYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFY 183 Query: 171 EKRRQIFLDIAR--NQPDRCHIVDS 193 EK + + + + NQP + +D+ Sbjct: 184 EKLLKQYPSVFKVYNQPKKIIFIDA 208 >gi|167971144|ref|ZP_02553421.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|170762140|ref|YP_001752100.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171916060|ref|ZP_02931503.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508501|ref|ZP_02958029.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|14285521|sp|Q9PRC5|KTHY_UREPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030845|sp|B1AI06|KTHY_UREP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|168827717|gb|ACA32979.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902601|gb|EDT48890.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675929|gb|EDT87834.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700962|gb|EDU19244.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 230 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 24/205 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGG--TPAAEAARHV 53 + GLFI FEGI+GAGKT S+LK+ L+ + + +TREPGG AAE R Sbjct: 13 LKKGLFIVFEGIDGAGKT---SILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREF 69 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 L ++ F A ++A++R +HV+ I P L + I++ DRF+ SSY YQG Q Sbjct: 70 FLK-NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQG---IVQ 125 Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + LD + +I+ Q E+ D D+ V+ L R++NR+ + F+ ++ + Sbjct: 126 NQSLDVIYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFY 180 Query: 171 EKRRQIFLDIAR--NQPDRCHIVDS 193 EK + + + + NQP + +D+ Sbjct: 181 EKLLKQYPSVFKVYNQPKKIIFIDA 205 >gi|126458752|ref|YP_001055030.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548] gi|171855086|sp|A3MSE7|KTHY_PYRCJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|126248473|gb|ABO07564.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548] Length = 193 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 20/204 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G+GKTT I+ + + L R V+VTREP G P + L G + Sbjct: 1 MFIAVEGIDGSGKTTVIAEVAKALPR----VYVTREPSGGPIGRLLKEWALRGGTAD--P 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +A++FAA R++H + I P L EG I++ +R+++SS AYQG + + ++ + I+ Sbjct: 55 HVDALLFAADRVEHYKREIEPKLREGYIVITERYVESSIAYQG----AAGVPIEYILYIN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 P TIILD+ +KR++ R L+ FE DV + R+I+L AR + Sbjct: 111 SVVPRPHLTIILDVDPAEAIKRIKARER------LEKFE--DVEFLRRVREIYLTRARAE 162 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 ++D+ VA +++ I+ Sbjct: 163 --GYPVIDAGRPAGEVAKDVVAII 184 >gi|255624824|ref|XP_002540531.1| Thymidylate kinase, putative [Ricinus communis] gi|223495133|gb|EEF21852.1| Thymidylate kinase, putative [Ricinus communis] Length = 127 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 47/112 (41%), Positives = 73/112 (65%), Gaps = 2/112 (1%) Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 +DSS YQG + + F+++LQ ++V V+PDCT+ILD+P +IGL+R + R S + Sbjct: 1 MDSSRVYQGVTGNLEPDFIEALQRVAVNGVVPDCTLILDIPAEIGLERARRRASAAAAP- 59 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 D FE++++ HEKRR+ FLDIA P RCH++D+ ++A I I+ E Sbjct: 60 -DRFEKEEMQTHEKRREAFLDIAARDPGRCHVIDAQRPEDAIADEIAGIIEE 110 >gi|270156732|ref|ZP_06185389.1| thymidylate kinase [Legionella longbeachae D-4968] gi|289164821|ref|YP_003454959.1| thymidylate kinase [Legionella longbeachae NSW150] gi|269988757|gb|EEZ95011.1| thymidylate kinase [Legionella longbeachae D-4968] gi|288857994|emb|CBJ11854.1| putative thymidylate kinase [Legionella longbeachae NSW150] Length = 212 Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 3/164 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62 G I EG+EGAGK+T ++ + L + TREPGGT E R+++ + D Sbjct: 6 GKLIVIEGLEGAGKSTAVNTVVDLLAERQIKTITTREPGGTAIGEILRNLIKNPEYRDVL 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ AR+ ++ VI PAL +G ++ DRF S+ AYQG + L Sbjct: 66 DDRSELLLLYTARIQLLKQVIEPALQKGMWVIADRFELSTMAYQGGGRGLDQEMIRHLSS 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 S+Q + PD T+ LD+ + G++RV++R +L E +++F R Sbjct: 126 FSLQGLKPDLTLYLDISPEEGMRRVKSRGTLDRIEQQSIEFFHR 169 >gi|108758316|ref|YP_631609.1| thymidylate kinase [Myxococcus xanthus DK 1622] gi|50404253|gb|AAT76867.1| serine/threonine kinase Pkn2 associate protein 1 [Myxococcus xanthus] gi|108462196|gb|ABF87381.1| thymidylate kinase [Myxococcus xanthus DK 1622] Length = 221 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 16/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCG 58 G FI EG++GAG TT + L L+ + + V TREP P R L L G Sbjct: 14 GRFIVLEGLDGAGTTTQVERLAAALRAEGHSVLTTREPSDGPVGTMIRQALTGRLGLPGG 73 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E A++FAA R DH+ + PAL G+I+LCDR++ SS AYQG L ++ Sbjct: 74 AGPLAPETLALLFAADRTDHLTARVLPALAAGQIVLCDRYVLSSLAYQG-----ASLPME 128 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ ++ V PD T+ + + ++ +R + R + FE + ++ + Sbjct: 129 WVEAVNACAVSPDLTLFVGVAPEVAARRRKAR-----GGAAELFEADEAQRRIAKQYVAA 183 Query: 179 DIARNQPDRCHIVDSAHSFQSV-ATNILNIVWELVQKR 215 R + +R +D ++V A +++ I L +KR Sbjct: 184 IRRREKHERIVHIDGEQGIEAVTAASLVEIRKLLARKR 221 >gi|238749664|ref|ZP_04611169.1| Thymidylate kinase [Yersinia rohdei ATCC 43380] gi|238712319|gb|EEQ04532.1| Thymidylate kinase [Yersinia rohdei ATCC 43380] Length = 191 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/183 (33%), Positives = 96/183 (52%), Gaps = 10/183 (5%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 12 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 70 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + + PD T+ LDLP +GL R + R Sbjct: 71 WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGDFRPDLTLYLDLPPAVGLARARAR- 129 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 LD E++ + E+ R +L++A VD++ + V+ +I ++ + Sbjct: 130 -----GELDRIEQESLAFFERTRARYLELAAAD-STIKTVDASQPLEQVSESIRQVLQQW 183 Query: 212 VQK 214 + + Sbjct: 184 LAR 186 >gi|71274567|ref|ZP_00650855.1| Thymidylate kinase [Xylella fastidiosa Dixon] gi|71898106|ref|ZP_00680292.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|71901337|ref|ZP_00683432.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|170730823|ref|YP_001776256.1| thymidylate kinase [Xylella fastidiosa M12] gi|254808316|sp|B0U447|KTHY_XYLFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71164299|gb|EAO14013.1| Thymidylate kinase [Xylella fastidiosa Dixon] gi|71728881|gb|EAO31017.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|71732080|gb|EAO34136.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|167965616|gb|ACA12626.1| dTMP kinase [Xylella fastidiosa M12] Length = 217 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 9 GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAATGRFS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E V R HVE++I P + G +++ DR+ S AYQG + L +D+L E Sbjct: 66 PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD ++LD+P IGL+R+ R S ++FE + + + R IFL A Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALE 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209 >gi|327399958|ref|YP_004340797.1| Thymidylate kinase [Archaeoglobus veneficus SNP6] gi|327315466|gb|AEA46082.1| Thymidylate kinase [Archaeoglobus veneficus SNP6] Length = 190 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 18/206 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G GKTT LK L+++ Y+V + +EP + E R + S A Sbjct: 1 MLIAIEGIDGVGKTTIAKFLKEELEKRGYEVVLLKEPTNS---EWGRKIKASLN-KRLSA 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E +F R +VE+ I PAL +GKI++ DR+ S+ AYQ R +EI+ Sbjct: 57 EEELELFILDRKYNVEHNILPALKQGKIVIMDRYYYSNIAYQAARGLDAERIKRINEEIA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I+LD P +I L+R+ R + S FE + + +K R+IF ++ Sbjct: 117 PR---PDIVILLDAPPEICLERIMERGEIPNS-----FEDPEYL--KKVREIF----KSL 162 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 D IVD++ S V ++L IV E Sbjct: 163 KDNVVIVDASKSIDEVKKDVLRIVLE 188 >gi|319760533|ref|YP_004124471.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF] gi|318039247|gb|ADV33797.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF] Length = 211 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 9/201 (4%) Query: 6 FISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG++G+GKTT +S +++ F ++ EPGGT +++ R ++ + +DE Sbjct: 5 FIVVEGLDGSGKTTIVSKIVQYFNNNNITNLITVHEPGGTKISDSLRFLIKNGAIDESIT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR +EN+++PAL +G ++ DRF SS+AYQG FL L + Sbjct: 65 NMTEVLMLYAARSQLLENIVKPALTKGDWVIGDRFDLSSFAYQGGGRGVDEFFLYLLSKS 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P LD+ +I L RV+NR LD E++ + K R+ + +A Sbjct: 125 VINNLFPHLIFYLDIAPEISLLRVKNR------DKLDRIEKEPLSFFYKVREYYKKVAAI 178 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 Q + I ++ S + V+ +I Sbjct: 179 QKNIITI-NANQSLEIVSRSI 198 >gi|94676700|ref|YP_588872.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166221720|sp|Q1LT42|KTHY_BAUCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|94219850|gb|ABF14009.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 212 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 60/171 (35%), Positives = 88/171 (51%), Gaps = 5/171 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG+EGAGKT+ I + L +++ TR+PGGTP AE R ++ E+ Sbjct: 5 FIVIEGLEGAGKTSVIQQIITILHSNGIHNIISTRDPGGTPLAETIRDIIKKGMNGEYIT 64 Query: 65 E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR V VI+PALM G ++ DR+ SS AYQG L +L++ Sbjct: 65 DYTELLLLYAARTQLVAQVIKPALMSGTWVISDRYDLSSQAYQGGGRGIDIRLLQNLRDA 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR---YSLRESACLDYFERKDVMIHE 171 ++ + PD TI LDLP R++ R E L +F+R + E Sbjct: 125 ALGKFYPDLTIYLDLPPSKCRARIRARGIPLDRIEMESLSFFQRTSIRYRE 175 >gi|260767879|ref|ZP_05876813.1| thymidylate kinase [Vibrio furnissii CIP 102972] gi|260615909|gb|EEX41094.1| thymidylate kinase [Vibrio furnissii CIP 102972] Length = 209 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS +I EG+EGAGK+T I + L D+ TREPGGT AE R ++ Sbjct: 1 MNSK-YIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59 Query: 60 DEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + E ++ AAR+ VENVI+PAL + ++ DR SS AYQG + Sbjct: 60 GEVLQDMTELLLMYAARVQLVENVIKPALQQRHWVVGDRHDMSSQAYQGGGRQIARETMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A + +++ S + V +I Sbjct: 174 ELAAG-DESVVTINAEQSIEQVTHDI 198 >gi|219852653|ref|YP_002467085.1| thymidylate kinase [Methanosphaerula palustris E1-9c] gi|219546912|gb|ACL17362.1| dTMP kinase [Methanosphaerula palustris E1-9c] Length = 209 Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 64/194 (32%), Positives = 99/194 (51%), Gaps = 21/194 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGK++ + LK L + D TREPG T E+ R + +E Sbjct: 2 VLITIEGIDGAGKSSLVRRLKHSL--ADLDPIFTREPGSTWIGESVRRGI----AEEIDP 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDSSQHLFLDS 119 AEA++FAA H+ VIRP L + ++++ DR++DS YAYQ G Sbjct: 56 VAEALLFAADHAAHIARVIRPGLAKNRVIISDRYVDSRYAYQSVMLKGVLPDPGTWLRQV 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 Q S + PD T ++ LPV L R+ +E +FE+ V+ E +Q +L Sbjct: 116 HQHWS---IAPDLTFLMVLPVGTALARITRGRPKKE-----HFEQTAVL--EAVQQQYLA 165 Query: 180 IARNQPDRCHIVDS 193 +AR +P R ++D+ Sbjct: 166 LARAEPSRFVVIDA 179 >gi|320102453|ref|YP_004178044.1| thymidylate kinase [Isosphaera pallida ATCC 43644] gi|319749735|gb|ADV61495.1| thymidylate kinase [Isosphaera pallida ATCC 43644] Length = 224 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 91/185 (49%), Gaps = 14/185 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGV 59 +G FI EG +G+GK+T SLL ++L+ + R+PGGT + R +LL C + Sbjct: 12 AGRFIVLEGPDGSGKSTQASLLAQWLRDAGVPLTTCRDPGGTRLGDRLRSILLDRHDCAI 71 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D E +++ A R V IRPAL +G +L DRFL S++ YQ Sbjct: 72 D---MTTELLLYMAGRAQLVRERIRPALDQGHWVLSDRFLMSNWVYQCFAGGVDDRVFHQ 128 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E++V +PD T++LDL ++ L R D E + ++ RQ FL+ Sbjct: 129 VAEVAVGSTLPDLTLVLDLELETALART--------GGARDRIEDRSWEYRQRVRQGFLE 180 Query: 180 IARNQ 184 ++ + Sbjct: 181 ASKRR 185 >gi|238762196|ref|ZP_04623168.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638] gi|238699543|gb|EEP92288.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638] Length = 191 Score = 91.7 bits (226), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 64/186 (34%), Positives = 96/186 (51%), Gaps = 14/186 (7%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 12 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 70 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + PD T+ LDLP +GL R + R Sbjct: 71 WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGAFRPDLTLYLDLPPVVGLARARARG 130 Query: 152 SLR--ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 L E LD+FER R +L++A +D++ + V+ +I ++ Sbjct: 131 ELDRIEQESLDFFERT--------RARYLELAAADSS-IKTIDASQPLEQVSESISRVLK 181 Query: 210 ELVQKR 215 + + +R Sbjct: 182 QWLTRR 187 >gi|15837182|ref|NP_297870.1| thymidylate kinase [Xylella fastidiosa 9a5c] gi|9105444|gb|AAF83390.1|AE003904_11 thymidylate kinase [Xylella fastidiosa 9a5c] Length = 217 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 9 GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E V R HVE++I P + G +++ DR+ S AYQG + L +D+L E Sbjct: 66 PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD ++LD+P IGL+R+ R S ++FE + + + R IFL A Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALE 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 173 LPSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 209 >gi|6066862|emb|CAB58188.1| thymidylate kinase [Yersinia enterocolitica] gi|6066864|emb|CAB58189.1| thymidylate kinase [Yersinia enterocolitica] gi|6066866|emb|CAB58190.1| thymidylate kinase [Yersinia enterocolitica] Length = 165 Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 9/150 (6%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 16 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP IGL R + R Sbjct: 75 WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPAIGLARARAR- 133 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181 LD E++ + E+ R+ +L++A Sbjct: 134 -----GELDRIEQESLAFFERTRERYLELA 158 >gi|284161466|ref|YP_003400089.1| thymidylate kinase [Archaeoglobus profundus DSM 5631] gi|284011463|gb|ADB57416.1| thymidylate kinase [Archaeoglobus profundus DSM 5631] Length = 199 Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G+GKTT + L L+++ YDV +EP + + R +L + Sbjct: 1 MLIAVEGIDGSGKTTIVRFLVEELKKRGYDVVAFKEPTDSEYGKKIRQILKERKI---SP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E +F R +V N I PAL GK+++ DR+ S+ AYQG + L + ++ ++ Sbjct: 58 EEELKLFIKDREFNVRNNILPALKSGKVVIMDRYYYSTIAYQG----ALGLDIGKIKTLN 113 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q PD IILD+ + LKR++ + D FE D+ K R IFL + N Sbjct: 114 EQFPKPDLVIILDVSPETALKRIKAKRK------PDRFE--DLEYLRKVRNIFLSLKNN- 164 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++D+ + V ++L +V E ++K Sbjct: 165 ---IVVIDAERDIEEVKRDVLKVVLEHLEK 191 >gi|213969786|ref|ZP_03397921.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1] gi|301382862|ref|ZP_07231280.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13] gi|302062832|ref|ZP_07254373.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40] gi|302131340|ref|ZP_07257330.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925594|gb|EEB59154.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1] Length = 119 Score = 91.3 bits (225), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 66/101 (65%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 A+ E ++ AAR H+ VIRPAL G+++LCDRF ++ + Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTNNLF 102 >gi|282855443|ref|ZP_06264764.1| dTMP kinase [Pyramidobacter piscolens W5455] gi|282586739|gb|EFB91986.1| dTMP kinase [Pyramidobacter piscolens W5455] Length = 201 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/203 (33%), Positives = 103/203 (50%), Gaps = 11/203 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G+GK+T L L+R+ V T EPG P + R +LL+ + Sbjct: 1 MFITIEGIDGSGKSTQARRLAARLRREGKKVTETHEPGDWPHGDILRALLLNGRLRH--P 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123 E ++F A R +HV VI+PAL +G+ ++CDR+ DS+ AYQ + L+SL + Sbjct: 59 MTEIMLFVADRCEHVAQVIQPALDQGEFVVCDRYNDSTRAYQCWGRGLKEDILESLIKWC 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + E PD T+ LDLPV+ KR+ R D E +D+ HE + F ++A Sbjct: 119 GIPE--PDLTVWLDLPVEEARKRMAGR------GGSDRIEGEDLKFHEAVARGFKELAER 170 Query: 184 QPDRCHIVDSAHSFQSVATNILN 206 R VD+ + I + Sbjct: 171 NGSRFFRVDARAGEDEIEETIFS 193 >gi|26554269|ref|NP_758203.1| thymidylate kinase [Mycoplasma penetrans HF-2] gi|46576587|sp|Q8EUV4|KTHY_MYCPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|26454278|dbj|BAC44607.1| thymidylate kinase [Mycoplasma penetrans HF-2] Length = 214 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 8/135 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 ++ GLF++FEG + GK+T L L F K+ V +TREPGGT E R +L++ Sbjct: 3 LDKGLFVAFEGPDACGKSTVSKLVYQKLINFFNNKD-SVILTREPGGTEVGEKIREILVN 61 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D EA++FAA+R +HV NVI A KI+LCDRF+ SS YQG + + Sbjct: 62 YDID---PRTEALLFAASRTEHVWNVILKAKANKKIILCDRFIHSSLVYQGIVKNLGYKN 118 Query: 117 LDSLQEISVQEVMPD 131 + + + + ++ PD Sbjct: 119 VYKVNQFGISKIKPD 133 >gi|33519860|ref|NP_878692.1| thymidylate kinase [Candidatus Blochmannia floridanus] gi|46576471|sp|Q7VR23|KTHY_BLOFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33504205|emb|CAD83467.1| thymidylate kinase [Candidatus Blochmannia floridanus] Length = 211 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 56/163 (34%), Positives = 89/163 (54%), Gaps = 4/163 (2%) Query: 6 FISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG++G+GKTT + ++K F +K +V T EPGGT A ++ + +E Sbjct: 5 FIVVEGLDGSGKTTIVHKIVKYFYNQKITNVITTHEPGGTEIAYILSELIKNKSKNEKLT 64 Query: 65 E-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + +E ++ AAR +ENVI+PAL +G ++ DR SS+AYQG + L+ L + Sbjct: 65 DLSELLMLYAARSQLLENVIKPALFKGDWVIGDRCDLSSFAYQGAGRKLNSVLLNMLSQY 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER 164 + + P LD+P ++ L R++NR L E L +F R Sbjct: 125 VINDFFPKLIFYLDIPSELVLSRIKNRKVLDRIEQESLSFFNR 167 >gi|6066870|emb|CAB58192.1| thymidylate kinase [Yersinia enterocolitica] gi|6066874|emb|CAB58194.1| thymidylate kinase [Yersinia enterocolitica] Length = 165 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 9/150 (6%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 16 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP IGL R + R Sbjct: 75 WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR- 133 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181 LD E++ + E+ R+ +L++A Sbjct: 134 -----GELDRIEQESLAFFERTRERYLELA 158 >gi|322435114|ref|YP_004217326.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9] gi|321162841|gb|ADW68546.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9] Length = 220 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 11/223 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----S 56 M G FI+FEG++G+GKTT + LL L + V R+PGGT + R VLL Sbjct: 1 MGRGFFITFEGLDGSGKTTQLKLLAAALTAEGRTVVSLRQPGGTALGDRIRGVLLDSRSE 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AE + A R + VIRPAL G ++LCDR+ DSS AYQG Sbjct: 61 AALGTIAPLAELALMFADRAQAIAEVIRPALGAGAVVLCDRYTDSSEAYQGAGRELGSER 120 Query: 117 LDSLQEISVQEVMPDCTIIL--DLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKR 173 + +L E + + P+ T++L L + R +N ++E + FER+ + + Sbjct: 121 VLALHETVCEGLWPELTVLLLPSLEASLRRARRRNTRHVKEHGTDENRFEREGDAFYGRI 180 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + + IA +P R V +++A VWE+V R+ Sbjct: 181 HEAYERIAEREPGRVVAVRDDAPVEAIAGK----VWEIVAGRL 219 >gi|6066850|emb|CAB58204.1| thymidylate kinase [Yersinia pestis] Length = 165 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 9/150 (6%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 16 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP +GL R + R Sbjct: 75 WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 133 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181 LD E++ + E+ R +L++A Sbjct: 134 -----GELDRIEQESLAFFERTRARYLELA 158 >gi|6066860|emb|CAB58213.1| thymidylate kinase [Yersinia pseudotuberculosis] Length = 165 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 9/150 (6%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 16 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP +GL R + R Sbjct: 75 WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 133 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181 LD E++ + E+ R +L++A Sbjct: 134 -----GELDRIEQESLAFFERTRARYLELA 158 >gi|6066852|emb|CAB58225.1| thymidylate kinase [Yersinia pseudotuberculosis] gi|6066854|emb|CAB58210.1| thymidylate kinase [Yersinia pseudotuberculosis] gi|6066856|emb|CAB58211.1| thymidylate kinase [Yersinia pseudotuberculosis] gi|6066858|emb|CAB58212.1| thymidylate kinase [Yersinia pseudotuberculosis] Length = 165 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 82/150 (54%), Gaps = 9/150 (6%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 16 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP +GL R + R Sbjct: 75 WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR- 133 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181 LD E++ + E+ R +L++A Sbjct: 134 -----GELDRIEQESLAFFERTRARYLELA 158 >gi|15828523|ref|NP_325883.1| thymidylate kinase (dTMP kinase) [Mycoplasma pulmonis UAB CTIP] gi|23821806|sp|Q98RF7|KTHY_MYCPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|14089465|emb|CAC13225.1| THYMIDYLATE KINASE (DTMP KINASE) [Mycoplasma pulmonis] Length = 234 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 61/211 (28%), Positives = 115/211 (54%), Gaps = 14/211 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGG--TPAAEAARHVLLSCGVD 60 +FI+FEGI+ +GKT+ ++ LK + +KN T EPGG +P + RH++L+ + Sbjct: 14 MFITFEGIDASGKTSLLAKLKAHVVQKNLQGKCTFTWEPGGRKSPEIQTIRHLILNKESN 73 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA ++++AR H++ VI P L + K++ CDRF+DSS+AYQ + L Sbjct: 74 -LSPIAEAFLYSSARRIHLDKVILPNLAKNKVVFCDRFVDSSFAYQAFGRDLGFEKIKLL 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++ + PD T IL + + ++R + R D E+++ ++K + + D Sbjct: 133 NELATDKKYPDITFILKISYEESMERRKAR-----QEDEDRLEKEENSFYQKVIKGY-DF 186 Query: 181 ARNQPD---RCHIVDSAHSFQSVATNILNIV 208 + P+ R ++D++ + + + ++L I+ Sbjct: 187 LASYPEFQKRIFVIDASKNQEEIFESVLKIL 217 >gi|119872697|ref|YP_930704.1| dTMP kinase [Pyrobaculum islandicum DSM 4184] gi|119674105|gb|ABL88361.1| thymidylate kinase [Pyrobaculum islandicum DSM 4184] Length = 205 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/210 (29%), Positives = 109/210 (51%), Gaps = 20/210 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EGI+G+GK+T I L L + V+VTREP G P + L G Sbjct: 3 FVAIEGIDGSGKSTVILQLAEMLPK----VYVTREPSGGPIGRLIKEWALKGGT--IDPH 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A++FAA R++H + I P + EG I++ +R+++SS AYQG + + +D ++ I+ Sbjct: 57 VDALLFAADRIEHYKREIEPKVREGYIVISERYIESSIAYQG----AAGVPIDFIKIINS 112 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 D TIILD+ +I + R++ R + + +R R+I+L AR + Sbjct: 113 AVPKADITIILDVDPEIAIARIKQRGDSEKYEHSAFLKRV--------REIYLQRAREE- 163 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +VD++ VA ++ I+ +++ R Sbjct: 164 -GYPVVDASRPPNVVAKDVAEIITQMLNYR 192 >gi|313887553|ref|ZP_07821236.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846431|gb|EFR33809.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 202 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG +G+GK+T +L+ L + N TREPGGT +E R ++L + E Sbjct: 4 FITFEGPDGSGKSTICNLVYDELIKNNIKTIKTREPGGTRISEKIRDIILDKDLKEMDMR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++++A+R H I PAL +G +LC+R++ SS AYQG + + ++ + + Sbjct: 64 TEALLYSASRAQHTYEKIIPALEDGVTVLCERYVLSSLAYQGHARGQKLEDIRAINDFAT 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD I R N + ++ AC D E + H+K R + ++ + + Sbjct: 124 GGKKPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNNLEKEE 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 + +D + + V + + I+ E Sbjct: 175 --NYYFIDVNQTIEEVFGDCMKILKE 198 >gi|182682175|ref|YP_001830335.1| thymidylate kinase [Xylella fastidiosa M23] gi|254808315|sp|B2I7G4|KTHY_XYLF2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|182632285|gb|ACB93061.1| dTMP kinase [Xylella fastidiosa M23] gi|307578444|gb|ADN62413.1| thymidylate kinase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 217 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 109/218 (50%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 9 GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E V R HVE++I P + G +++ DR+ S AYQG + L +D+L E Sbjct: 66 PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD ++LD+P IGL+R+ R S ++FE + + + R IFL A Sbjct: 122 NAFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALE 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209 >gi|327310490|ref|YP_004337387.1| dTMP kinase [Thermoproteus uzoniensis 768-20] gi|326946969|gb|AEA12075.1| dTMP kinase [Thermoproteus uzoniensis 768-20] Length = 194 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 60/206 (29%), Positives = 113/206 (54%), Gaps = 22/206 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EGI+G+GK+T I L++ L ++ T+EP P + L G + Sbjct: 2 GLFVAIEGIDGSGKSTVIEELRKILP-----IYATKEPSDGPIGRLIKSWALRGGTTD-- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A++FAA RLDH + I PAL EG++++ +R+++SS AYQG + + + ++ I Sbjct: 55 PYVDALLFAADRLDHYQREIAPALGEGRVVVTERYVESSIAYQG----AAGVDIKFIELI 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LD+ + + RV R S ++ +ER + + + R I+L R Sbjct: 111 NARVPAPDITVLLDIEPEKAVARVSAR-----SGYVEKYERLEFL--KAVRSIYL---RR 160 Query: 184 QPDRCHIV-DSAHSFQSVATNILNIV 208 +R ++V ++ +++A I ++ Sbjct: 161 AAERGYVVLNAEEPPEAIARRIAEMI 186 >gi|6066868|emb|CAB58191.1| thymidylate kinase [Yersinia enterocolitica] gi|6066872|emb|CAB58193.1| thymidylate kinase [Yersinia enterocolitica] Length = 165 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 82/150 (54%), Gaps = 9/150 (6%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 16 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 74 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP IGL R + R Sbjct: 75 WVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPVIGLARARAR- 133 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIA 181 LD E++ + E+ R+ +L +A Sbjct: 134 -----GELDRIEQESLAFFERTRERYLKLA 158 >gi|297171025|gb|ADI22039.1| thymidylate kinase [uncultured myxobacterium HF0200_05J13] Length = 199 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 15/212 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EGI+G+G TT ++ + L ++ V T EP P R +L G + Sbjct: 1 MTKSQFIALEGIDGSGTTTQLTRIAEALTKRGRVVTQTMEPSRGPIGTRIRDILR--GEE 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ A++FAA RLDH++ I PAL G+++L DR+L SS AYQ S H+ L + Sbjct: 59 KTPPDSLALLFAADRLDHLQREIAPALQRGEVVLSDRYLISSLAYQ-----SLHVELPFI 113 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-LD 179 + I+ + PD +I+L + + KR R E+ D D+ + EK Q + Sbjct: 114 EMINARARKPDVSILLKICPEEAAKRRATRGG--EAEIFD-----DLDLQEKISQAYDKA 166 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 AR+ IVD++ S V IL+ + L Sbjct: 167 FARSDLGPTAIVDASASMSDVTDAILSAIDSL 198 >gi|88607927|ref|YP_504721.1| thymidylate kinase [Anaplasma phagocytophilum HZ] gi|123495836|sp|Q2GLN0|KTHY_ANAPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|88598990|gb|ABD44460.1| thymidylate kinase [Anaplasma phagocytophilum HZ] Length = 219 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 19/189 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G GKTT LL +++ +V +TREPGGT E R V LS + Sbjct: 1 MFITFEGIDGCGKTTQSILLAKYMSDLYGEDNVVLTREPGGTSFNELLRSVFLSVSDYKV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +F A R + V+ AL KI++ DR +DS+ AYQG + LD + + Sbjct: 61 DKLTELFLFLAMRRESFVKVVESALRANKIVISDRCVDSTVAYQG---YGCGIDLDLIYK 117 Query: 123 IS--VQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ V ++PD T I+D+ ++ L R +N Y ES +D++ K R+ F Sbjct: 118 LNSLVMGIVPDMTFIIDIDIEKALSRATRNGY---ESNSMDFY--------HKVRKGFQR 166 Query: 180 IARNQPDRC 188 IA + RC Sbjct: 167 IAEEEKHRC 175 >gi|47458911|ref|YP_015773.1| thymidylate kinase [Mycoplasma mobile 163K] gi|59798285|sp|Q6KIL4|KTHY_MYCMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|47458239|gb|AAT27562.1| thymidylate kinase [Mycoplasma mobile 163K] Length = 209 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 19/219 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTP--AAEAARHVLLSCGVD 60 +FISFEGI+GAGK+T I LKR L + D TREPGG AE R +LL + Sbjct: 1 MFISFEGIDGAGKSTIIKKLKRKLPKLYPDKKFVFTREPGGKKLKEAEKIRKILLDKKTN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +++AA+R H++++I PAL +G I++ DR++DSSY YQG + + Sbjct: 61 -IDPMTETLLYAASRRVHLDSLIWPALKKGHIVISDRYVDSSYVYQGIARGLGVKVVKEI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFL 178 +I+ MPD T L + + + R R E + D+F R +E +I Sbjct: 120 NDIATSNFMPDYTFFLSISEEESIIRRHKRGKPDRLEMSSKDFFSRA----YEGYFKII- 174 Query: 179 DIARNQP---DRCHIVDSAHSFQSVATNILNIVWELVQK 214 N P DR +V++ + ++ NILN ++++K Sbjct: 175 ----NSPTMADRFILVNAEENVGTILKNILNEFDKILKK 209 >gi|313616705|gb|EFR89481.1| thymidylate kinase [Listeria innocua FSL S4-378] Length = 158 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 82/147 (55%), Gaps = 6/147 (4%) Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLD 118 +E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG RD + L Sbjct: 9 EEMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL- 67 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + ++++ +PD T LD+P ++GL R+ RE LD ++D+ HEK + + Sbjct: 68 QVNLYAIEDTIPDRTYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQNGYE 123 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNIL 205 I + PDR VD+ + + + T IL Sbjct: 124 KIIQMFPDRFMRVDATKTPEEITTIIL 150 >gi|78778518|ref|YP_396630.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312] gi|123554778|sp|Q31D51|KTHY_PROM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78712017|gb|ABB49194.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312] Length = 212 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 15/207 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLL-SC 57 G FI EGI+G GKTT I+ L ++L + K + TREPGG+ + R ++L + Sbjct: 3 GKFIVIEGIDGCGKTTQINELSKWLPKSGLIKKGSKLITTREPGGSLLGKKLRGLILDNN 62 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++ + AE ++++A R +H+ +I PAL ++ DRF DS+ AYQG + Sbjct: 63 KTNKPSSLAELLLYSADRAEHISKIISPALNNNDWVISDRFSDSTLAYQGYGRKINLEII 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ I Q PD T L++ + + R R++ D E + + EK + F Sbjct: 123 KKVESIVCQGEYPDLTFFLEISPEESIMR-------RKNEIPDRIESEGIRFLEKVNEGF 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 IAR + + ++ ++ + ++++ I Sbjct: 176 KLIAREK--KWKVISASQNIKTISNQI 200 >gi|123967684|ref|YP_001008542.1| thymidylate kinase [Prochlorococcus marinus str. AS9601] gi|166223102|sp|A2BNS4|KTHY_PROMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123197794|gb|ABM69435.1| Thymidylate kinase [Prochlorococcus marinus str. AS9601] Length = 212 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 15/207 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI EGI+G GKTT I L ++L +K + TREPGG+ + R ++L Sbjct: 3 GKFIVIEGIDGCGKTTQIDELSKWLPNSGLIKKGSKLITTREPGGSLLGKKLRGLILDNN 62 Query: 59 VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + AE ++++A R +HV +I PAL ++ DRF DS+ AYQG + + Sbjct: 63 KNNKPSSLAELLLYSADRAEHVSKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEII 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ I Q PD T L++ + + R R++ D E + + EK + F Sbjct: 123 KNIESIVCQGASPDLTFFLEISPEESIFR-------RKNEIPDRIESEGIRFLEKVNEGF 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 IA+ + ++ ++ + Q+++ I Sbjct: 176 KLIAKQK--NWKVISASQNIQTISNQI 200 >gi|159902685|ref|YP_001550029.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9211] gi|238687123|sp|A9BCY7|KTHY_PROM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|159887861|gb|ABX08075.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9211] Length = 215 Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 6/168 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI EGI+G GK+T IS + ++L + KN ++++TREPGGT ++ R +LL Sbjct: 3 GHFIVLEGIDGCGKSTQISHISKWLPQSGLMPKNANLYITREPGGTTLGKSLRDLLLHEH 62 Query: 59 VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A E +++AA R +H+ ++I+P L +G ++ DRF S+ AYQG + Sbjct: 63 ETNVPAPLTELLLYAADRAEHIHSLIQPKLDKGDWVISDRFSGSTLAYQGFGRGLDINLI 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 L I+ Q ++P+ TI L + V ++R + + R A + F +K Sbjct: 123 RRLDAIARQGLVPEITIFLKISVLTSMRRRAKKSADRMEAEGEGFLKK 170 >gi|119874730|gb|ABM05842.1| Tmk [Yersinia pestis] Length = 150 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 5/135 (3%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 D+ TREPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G Sbjct: 10 DIVFTREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGS 68 Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ DR SS AYQG + SL++ + E PD T+ LDLP +GL R + R Sbjct: 69 WVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARARG 128 Query: 152 SLR--ESACLDYFER 164 L E L +FER Sbjct: 129 ELDRIEQESLAFFER 143 >gi|14285519|sp|Q9PFS7|KTHY_XYLFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 208 Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 17/217 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 1 MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFSP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E V R HVE++I P + G +++ DR+ S AYQG + L +D+L E + Sbjct: 58 EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEAN 113 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD ++LD+P IGL+R+ R S ++FE + + + R IFL A Sbjct: 114 AFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALEL 164 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 165 PSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 200 >gi|255994228|ref|ZP_05427363.1| dTMP kinase [Eubacterium saphenum ATCC 49989] gi|255993896|gb|EEU03985.1| dTMP kinase [Eubacterium saphenum ATCC 49989] Length = 138 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 13/140 (9%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MNS G FI+FEG++GAGK T I + +L + REPGGT +E R +LL Sbjct: 1 MNSDGFGKFITFEGLDGAGKGTQIDKVMEYLSDIGRAAILVREPGGTQLSEQIREMLLQ- 59 Query: 58 GVDEFGAE--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 +EF +E ++F +AR + + VIRPAL GK ++CDR++DS+ AYQG + L Sbjct: 60 --NEFAISPMSELLLFLSARAELISKVIRPALESGKDVVCDRYMDSTIAYQG---YGRGL 114 Query: 116 FLD--SLQEISVQEVMPDCT 133 + SL I+ ++PD T Sbjct: 115 LSEAISLNNIATGFLVPDIT 134 >gi|294102043|ref|YP_003553901.1| thymidylate kinase [Aminobacterium colombiense DSM 12261] gi|293617023|gb|ADE57177.1| thymidylate kinase [Aminobacterium colombiense DSM 12261] Length = 203 Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 11/206 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +FI+ EGI+G GK+T + LK LQ+K + V TREPGG + R +LL D Sbjct: 1 MFITLEGIDGCGKSTQAAFLKEQLQQKKKEPVLWTREPGGWVHGDFVRTLLLE--KDLRH 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQE 122 +E +F R +HV VI PAL G+I+LC+R+ DS+ AYQ R + D Sbjct: 59 ELSELFLFVIDRCEHVSQVISPALSCGQIVLCERYTDSTRAYQIWGRGLPEEKVEDLFAW 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 S E PD T+ +D P+ + + R++ D E + + + + ++++ Sbjct: 119 CSFPE--PDLTLWIDTPLPVAINRIKT-----TRGHFDRIESETDGFLNRVCEGYKELSK 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R +D + + V+ I +V Sbjct: 172 RFPHRIVRIDGSQPTEEVSAQIWKVV 197 >gi|73668631|ref|YP_304646.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro] gi|121722245|sp|Q46DH6|KTHY_METBF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|72395793|gb|AAZ70066.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro] Length = 205 Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 19/216 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T L++ + K + TREP GT +A + S D+F Sbjct: 3 GKLITLEGIDGSGKSTVAEKLQKNPEIKAFKPVFTREPTRGTLTGDAVEKAIQS-DTDQF 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLD 118 AE +F A +H+ +I+PAL GKI++ DR+ DS YAYQG R + ++ Sbjct: 62 ---AELFLFTADHAEHLAKLIKPALENGKIVISDRYSDSRYAYQGITLKTRLENPLEWVK 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L ++PD T + D+ +I ++R R + L++ + R IFL Sbjct: 119 DLHR--SWTIVPDLTFLFDIRPEISIERCGKRGEQSKFEKLEFL--------QGVRAIFL 168 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A + P+R ++D++ S + + ++ + E + + Sbjct: 169 KLAADDPERFVVIDASRSPEYIEKEVVKKILEFLSR 204 >gi|317179651|dbj|BAJ57439.1| thymidylate kinase [Helicobacter pylori F30] Length = 191 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 58/151 (38%), Positives = 89/151 (58%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+ENVI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIENVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132 >gi|91773625|ref|YP_566317.1| thymidylate kinase [Methanococcoides burtonii DSM 6242] gi|121691672|sp|Q12VF9|KTHY_METBU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|91712640|gb|ABE52567.1| Thymidylate kinase [Methanococcoides burtonii DSM 6242] Length = 201 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 24/216 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+ EGI+G+GK+T + RFL + T+EP + +A + S DE Sbjct: 3 GKLITLEGIDGSGKST----ITRFLNSHPAFANAVFTKEPTTSWIGDAVYKAIQS-DTDE 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFL 117 AE ++F A DH+ +IRPA+ EGKI++ DR+ DS YAYQG ER ++ Sbjct: 58 L---AELMLFTADHADHISTLIRPAIEEGKIVISDRYSDSRYAYQGVTLKERMEEPMEWI 114 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + ++PD T++ D+ + ++R R + FE+ D++ + R+ + Sbjct: 115 QMIHR--GWTIIPDLTLLFDIDPAVAVQRCGKRGEQTK------FEKTDLL--KGVRENY 164 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 L +A +P+R ++D+ + + ++L + +++ Sbjct: 165 LKLAEKEPERFVVIDTDRDLKEIEKDVLQAITSIIE 200 >gi|28199448|ref|NP_779762.1| thymidylate kinase [Xylella fastidiosa Temecula1] gi|32129653|sp|Q87B89|KTHY_XYLFT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28057563|gb|AAO29411.1| thymidylate kinase [Xylella fastidiosa Temecula1] Length = 208 Score = 88.2 bits (217), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 65/217 (29%), Positives = 108/217 (49%), Gaps = 17/217 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 1 MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFSP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E V R HVE++I P + G +++ DR+ S AYQG + L +D+L E + Sbjct: 58 EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQG----AAGLPVDALLEAN 113 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD ++LD+P IGL+R+ R S ++FE + + + R IFL A Sbjct: 114 AFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFL--ALEL 164 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 165 PSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 200 >gi|188528244|ref|YP_001910931.1| thymidylate kinase [Helicobacter pylori Shi470] gi|238691955|sp|B2UVL9|KTHY_HELPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|188144484|gb|ACD48901.1| thymidylate kinase [Helicobacter pylori Shi470] Length = 191 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 88/150 (58%), Gaps = 17/150 (11%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + VT+EPGGT E RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALVTKEPGGTRMGEHLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 + Q V+PD I+L + + GLK+ + SL Sbjct: 106 ATQSVLPDKIILLLIDKE-GLKQRLSHKSL 134 >gi|123965393|ref|YP_001010474.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9515] gi|166223101|sp|A2BUA6|KTHY_PROM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123199759|gb|ABM71367.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9515] Length = 210 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 15/207 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI EGI+G GKTT I + R+L KN + TREPGG+ + R+++L Sbjct: 3 GKFIVIEGIDGCGKTTQIDEISRWLPTSGLMGKNSKLIKTREPGGSLLGKKLRNLILDNN 62 Query: 59 VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + AE ++++A R +HV +I PAL + ++ DRF DS+ AYQG + Sbjct: 63 KNNKPSSLAELLLYSADRAEHVSKIISPALKKEDWVISDRFSDSTLAYQGYGRHINLEII 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ I Q PD TI L++ + + R R++ D E + + +K + F Sbjct: 123 KNIESIVCQGEYPDLTIFLEISAEESILR-------RKNFVPDRMESEGINFLQKVNEGF 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 IA+ + + ++ + + +++ I Sbjct: 176 KLIAKEK--KWKVISATQNITAISNEI 200 >gi|270669144|ref|ZP_06222575.1| dTMP kinase [Haemophilus influenzae HK1212] gi|270316610|gb|EFA28429.1| dTMP kinase [Haemophilus influenzae HK1212] Length = 111 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 1/105 (0%) Query: 4 GLFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ H S+++ + DV TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG Sbjct: 63 TDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQG 107 >gi|51246661|ref|YP_066545.1| thymidylate kinase [Desulfotalea psychrophila LSv54] gi|59798232|sp|Q6AJE2|KTHY_DESPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|50877698|emb|CAG37538.1| related to thymidylate kinase [Desulfotalea psychrophila LSv54] Length = 202 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 70/214 (32%), Positives = 108/214 (50%), Gaps = 19/214 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G I FEG +GAGK+T I +L +L+ K DV + EP P + R L ++ Sbjct: 4 NPGKLIIFEGTDGAGKSTQIKMLANYLRSKGLDVIASFEPTNGPYGQKIRQ--LYTDRNK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 E +F A R +HV +I PA+ GKI+LCDR+ S+ AYQG D + L +S Sbjct: 62 VTRNEELELFLADRREHVNKLINPAISAGKIVLCDRYYLSTAAYQGALGFDVEEILQRNS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD ++L +PV+ G +R+ S R D FE+ +++ EK IF Sbjct: 122 FAP------TPDLALLLQIPVEDGRRRIT---SSRGEETND-FEKAEML--EKVSTIFNS 169 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ P HI ++ S +V +I+ V +L++ Sbjct: 170 LSF--PYIRHI-NACQSIDNVQRDIIMQVKQLLK 200 >gi|226330525|ref|ZP_03806043.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198] gi|225201320|gb|EEG83674.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198] Length = 207 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 20/206 (9%) Query: 17 KTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVD--EFGAEAEAIVFAA 73 KT+ I + L+ K ++ TREPGGTP AE R L+ G++ + +AE ++ A Sbjct: 9 KTSAIQTVIDTLKDKGITNLAFTREPGGTPLAEKLRE-LIKQGIEGEKVTDKAELLMLYA 67 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQEVMPDC 132 AR+ +ENVI+PAL EGK ++ DR SS AYQ G R + L L SL+ + PD Sbjct: 68 ARVQLIENVIKPALAEGKWVIGDRHDLSSQAYQGGGRGLDKDLML-SLRNTVLGNFRPDL 126 Query: 133 TIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 T+ LDL IGL R + R L E +D+F R R+ + +A++ D Sbjct: 127 TLYLDLDPAIGLTRARARGELDRIEKESMDFFYRT--------RERYQALAKDD-DTIIT 177 Query: 191 VDSAHSFQSVATNILNIV--WELVQK 214 +D++ + V +I I+ W LVQ+ Sbjct: 178 IDASQAIDKVQADIRQILTAW-LVQQ 202 >gi|261840150|gb|ACX99915.1| thymidylate kinase [Helicobacter pylori 52] Length = 191 Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 23/164 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALEEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + Q V+P+ I+L + + GLK+ R SL+ LD E + + Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK---SLDKIENQGI 142 >gi|321309545|ref|YP_004191874.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1] gi|319801389|emb|CBY92035.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1] Length = 220 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 8/216 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLK--RFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGV 59 GLF+ FEGI+G+GKTT I LK + + ++ T EPGG R ++L G Sbjct: 9 GLFVVFEGIDGSGKTTLIKALKGSKKISEAYREILFTYEPGGKDNTFGNKIRDLILREG- 67 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + +A++F A+R +H+E +I+PAL +++CDR+ S+ YQG+ D + ++ Sbjct: 68 NSLSEKTQALLFLASRSEHLEKIIQPALDREALIICDRYYLSTLVYQGKGDLDRINWIRK 127 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 Q+ + PD T L+L + L R +N+ +E+ +D +D + K +I + Sbjct: 128 NQDF-ITFRKPDITFFLNLSWEEYLSRYKNKVESQENNWMDKLIYEDYLRMCKSYEIAM- 185 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R ++D S ++ I +++ E+ R Sbjct: 186 -KEDISGRLILLDGGDSTNNLVKRIEDVLVEVANGR 220 >gi|282163168|ref|YP_003355553.1| probable thymidylate kinase [Methanocella paludicola SANAE] gi|282155482|dbj|BAI60570.1| probable thymidylate kinase [Methanocella paludicola SANAE] Length = 201 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 19/208 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I+ EGI+G GKTT + LLK +L+R + +EP G E AR Sbjct: 4 KGRLITIEGIDGTGKTTQVQLLKEWLERHGVEAVALKEPTQGKYGQEIARR----AHAGS 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSL 120 FG E +F R + VE IRPAL GK ++ DR+ S+ AYQG R + + L++ Sbjct: 60 FGPRDELRLFMEDRREDVEKNIRPALESGKSVIMDRYYLSNMAYQGARGLDPERIRLEN- 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +PD IILDL + + RV R + + +FE + + EK R+IFL I Sbjct: 119 ---EAFSPVPDLIIILDLAPEKSMARVNTRKN-----VVGHFENEAYL--EKVRKIFLAI 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 + QP+ ++++ V I++ V Sbjct: 169 GK-QPNAV-VINTEAPVADVHERIVDAV 194 >gi|320107127|ref|YP_004182717.1| thymidylate kinase [Terriglobus saanensis SP1PR4] gi|319925648|gb|ADV82723.1| thymidylate kinase [Terriglobus saanensis SP1PR4] Length = 217 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 4/152 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCG 58 +G FISFEG++G+GKTT + L+ FL + +V R+PGGT + R V+L Sbjct: 2 AGFFISFEGLDGSGKTTQLRRLETFLIGRGREVVSLRQPGGTALGDRIRAVVLDSKTEAA 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 V + E + A R + VI PAL GKI+LCDR+ DS+ AYQG + Sbjct: 62 VGKIAPMTEMALMFADRAQAIAEVILPALEAGKIVLCDRWTDSTEAYQGGGRGLGAEKVL 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + ++ P TI+L + LKR + R Sbjct: 122 EMHHAVCGDLWPALTILLLPDLQASLKRARRR 153 >gi|297569137|ref|YP_003690481.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2] gi|296925052|gb|ADH85862.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2] Length = 222 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 56/169 (33%), Positives = 90/169 (53%), Gaps = 15/169 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ I+ EGI+G GK+T LL + L++ +V VTREP P R + L+ Sbjct: 13 AGVLIALEGIDGTGKSTQQQLLAQRLRQLGLEVVVTREPTDGPYGRRLRELFLNRA--SL 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E +F A R +HV +I PAL G++++ DR+ S+ AYQG +S H D Sbjct: 71 SPEEELQLFLADRREHVAKLIEPALKAGRVVITDRYYYSTAAYQG---ASGH---DPAAI 124 Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +++ E PD ++L+ P +G++RVQ L+ FE++D + Sbjct: 125 LAINESFAPRPDLVLLLEAPPAVGVRRVQE----GRGESLNDFEQEDYL 169 >gi|126695487|ref|YP_001090373.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9301] gi|166223098|sp|A3PAJ7|KTHY_PROM0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|126542530|gb|ABO16772.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9301] Length = 212 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 87/168 (51%), Gaps = 7/168 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI EGI+G GKTT I L ++L +K + TREPGG+ + R ++L Sbjct: 3 GKFIVIEGIDGCGKTTQIDELSKWLPISGLLKKESKLITTREPGGSLLGKKLRRLILDNN 62 Query: 59 VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + AE ++++A R +HV +I PAL ++ DRF DS+ AYQG + + Sbjct: 63 ENNKPSSLAELLLYSADRAEHVSKIILPALNNNDWVISDRFSDSTLAYQGYGRNINLEII 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 +++ I Q PD T L++ + + R +N R ES + + ER Sbjct: 123 KNIESIVCQGASPDLTFFLEISPEESIFRRKNEIPDRIESEGIRFLER 170 >gi|208435342|ref|YP_002267008.1| thymidylate kinase [Helicobacter pylori G27] gi|238057700|sp|B5Z993|KTHY_HELPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|208433271|gb|ACI28142.1| thymidylate kinase [Helicobacter pylori G27] Length = 191 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 23/164 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVELLKTRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +HVE+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + Q ++P+ I+L + + GLK+ R SL+ LD E + + Sbjct: 106 ATQSILPEKIILLVIDKE-GLKQ---RLSLK---SLDKIENQGI 142 >gi|297380671|gb|ADI35558.1| thymidylate kinase [Helicobacter pylori v225d] Length = 191 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 30/208 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + VT+EPGGT E RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALVTKEPGGTRMGEHLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q V+P+ I+L + + GLK+ R SL+ LD E + + L I + Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK---SLDKIENQGT-------EKLLTIQQK 151 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 H + + + + VW+L Sbjct: 152 LKTHAHALKEKFGCEVLELDAQKSVWDL 179 >gi|20093219|ref|NP_619294.1| thymidylate kinase [Methanosarcina acetivorans C2A] gi|23821774|sp|Q8THS9|KTHY_METAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|19918569|gb|AAM07774.1| thymidylate kinase Tmk [Methanosarcina acetivorans C2A] Length = 206 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 19/216 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T L+ + + ++ TREP GT A + + S D+ Sbjct: 3 GKLITLEGIDGSGKSTVAKKLQENSELRVFEPVFTREPTRGTLTGNAVENAIQS-DTDQL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +F A +H+ +++PAL +GK ++ DR+ DS YAYQG + ++ + L+ Sbjct: 62 ---AELFLFTADHAEHLAKLVKPALEDGKTVISDRYSDSRYAYQG--ITLKNRLDNPLEW 116 Query: 123 I----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + V+PD T + D+ +I +KR R + +++ R++FL Sbjct: 117 VRDLHRGWTVIPDLTFLFDIEPEIAVKRCGKRGEQTKFEKIEFL--------RGVRELFL 168 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A +P+R IVD++ S + V ++ + + VQ+ Sbjct: 169 GLAAEEPERFVIVDASGSPEDVEKAVVQKILDFVQR 204 >gi|187736367|ref|YP_001878479.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835] gi|254808272|sp|B2UN87|KTHY_AKKM8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187426419|gb|ACD05698.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835] Length = 206 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 6/147 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEGI+G GK+THI L+++L+ K +V + EP R + S Sbjct: 9 GRLIVFEGIDGTGKSTHIGHLRKYLEEKELEVVQSFEP---TRGRWGRMLRDSAVTGRLS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E +F R +HV+ +I PAL G +L DR+ S AYQG R + + +E Sbjct: 66 VEEEVALFLKDRREHVKMLIAPALARGAWVLLDRYYLSMMAYQGARGIDPEVIRAANEEF 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150 + +PD + LD+PV + L+R+ NR Sbjct: 126 A---PVPDAVVWLDIPVSVALERIGNR 149 >gi|222457907|gb|ACM61840.1| thymidylate kinase [Yersinia pseudotuberculosis] Length = 178 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 80/147 (54%), Gaps = 9/147 (6%) Query: 37 VTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 + REPGGTP AE R L+ G+D +AE ++ AAR+ VENVI+PAL G ++ Sbjct: 27 LPREPGGTPLAEKLRD-LIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVV 85 Query: 95 CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 DR SS AYQG + SL++ + E PD T+ LDLP +GL R + R Sbjct: 86 GDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARARGE-- 143 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIA 181 LD E++ + E+ R +L++A Sbjct: 144 ----LDRIEQESLAFFERTRARYLELA 166 >gi|308062738|gb|ADO04626.1| thymidylate kinase [Helicobacter pylori Cuz20] Length = 191 Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 23/162 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + VT+EPGGT E RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALVTKEPGGTRMGEHLRHIALNESISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + Q V+P+ I+L + + GLK+ R SL+ LD E + Sbjct: 106 ATQSVLPEKIILLLIDKE-GLKQ---RLSLK---SLDKIENQ 140 >gi|327398213|ref|YP_004339082.1| Thymidylate kinase [Hippea maritima DSM 10411] gi|327180842|gb|AEA33023.1| Thymidylate kinase [Hippea maritima DSM 10411] Length = 201 Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 17/209 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 NS +I+FEGI+ +GKTT L FL+++ ++V T+EPGGT R VLL+ + Sbjct: 8 NSCRYIAFEGIDASGKTTQAKLFVDFLKKEGFNVFFTKEPGGT--IPFFREVLLN---KQ 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A+ +F A R + I+ L G +++ DR S+ AYQG D FL Sbjct: 63 LVKQAQLFLFLADRAQTIL-TIKKKLDAGFVVVSDRSFYSTLAYQGFGDDMDIGFLKQAN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 EI+ + PD +D+ + + R+ + D E K V E+ RQ ++ ++ Sbjct: 122 EIATGGLKPDLVFCIDITTNEMMNRLNKK---------DAIESKPVGFFERVRQGYIKLS 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++ D ++V+ S V + ++ I W+ Sbjct: 173 KDY-DNFYLVNGLRSIDDVFSEVVEI-WK 199 >gi|157412486|ref|YP_001483352.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9215] gi|166987706|sp|A8G2D5|KTHY_PROM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157387061|gb|ABV49766.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9215] Length = 212 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 89/168 (52%), Gaps = 7/168 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI EGI+G GKTT I L ++L +K + TREPGG+ + R ++L Sbjct: 3 GKFIVIEGIDGCGKTTQIDELSKWLPSSGLIKKGSKLITTREPGGSHLGKRLRGLILDNN 62 Query: 59 VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + AE ++++A R +HV +I PAL ++ DRF DS+ AYQG + + Sbjct: 63 QNNKPSPLAELLLYSADRAEHVYKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEII 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 +++ I Q PD T L++ + + R +N+ R ES +++ E+ Sbjct: 123 KNIESIVCQGESPDLTFFLEISPEESIFRRKNQIPDRIESEGIEFLEK 170 >gi|94266074|ref|ZP_01289792.1| Thymidylate kinase [delta proteobacterium MLMS-1] gi|94267013|ref|ZP_01290658.1| Thymidylate kinase [delta proteobacterium MLMS-1] gi|93452287|gb|EAT02928.1| Thymidylate kinase [delta proteobacterium MLMS-1] gi|93453357|gb|EAT03788.1| Thymidylate kinase [delta proteobacterium MLMS-1] Length = 218 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 14/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ I+ EGI+G GK+T + LL R L+ +V T EP P R + + + Sbjct: 13 AGILIALEGIDGTGKSTQLKLLARRLRELGLEVVTTFEPTDGPHGRYLRQMFKNRA--QL 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +F A R DHVE VI PAL GK++L DR+ S+ AYQG + ++ Sbjct: 71 PPKEELRLFIADRHDHVEQVIAPALAAGKVVLTDRYYFSTAAYQGAAGHDPAAIIAENEQ 130 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD ++L+ P +G+ RV+ LR L+ FE++D + + IF +A Sbjct: 131 FAPR---PDLVLLLEAPPAVGIARVRE---LR-GESLNDFEQEDYL--RRVTAIFASLAD 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R +D+ V + V +L++++ Sbjct: 182 S---RIRRIDATGRLDQVQQRLWPPVAQLLRQQ 211 >gi|317011608|gb|ADU85355.1| thymidylate kinase [Helicobacter pylori SouthAfrica7] Length = 191 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 61/161 (37%), Positives = 90/161 (55%), Gaps = 21/161 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T I LLK Q + T+EPGGT E R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQIELLKGAFQNALF----TKEPGGTKTGETLRRIALNENMSEL-- 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E K+++ DR L S AY SQ L+ L ++ Sbjct: 55 -ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 Q ++P+ IIL L + GLK R SL+ LD E++ Sbjct: 107 TQSILPE-KIILLLIDEEGLKE---RLSLK---SLDKIEKQ 140 >gi|217033894|ref|ZP_03439318.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10] gi|216943657|gb|EEC23102.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10] Length = 191 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 93/164 (56%), Gaps = 23/164 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + Q V+P+ I+L + + GLK+ R SL+ LD E + + Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLKN---LDKIENQGI 142 >gi|302553088|ref|ZP_07305430.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736] gi|302470706|gb|EFL33799.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736] Length = 547 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 8/168 (4%) Query: 37 VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +TREPG TP + R +LL AEA+++AA R +HV+ V+RPAL G +++ D Sbjct: 2 LTREPGATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVISD 61 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 R++DSS AYQG + + + ++P T++L D+ + + R+ + Sbjct: 62 RYIDSSVAYQGAGRDLSPTEIARINRWATNGLVPHLTVLL----DVAPETARERF----T 113 Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 D E + H + R FL +A R +VD+ ++V T I Sbjct: 114 EAPDRLESEPAEFHARVRAGFLTLAAADAGRYLVVDAGQEAEAVTTVI 161 >gi|21227213|ref|NP_633135.1| thymidylate kinase [Methanosarcina mazei Go1] gi|23821771|sp|Q8PXV5|KTHY_METMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|20905554|gb|AAM30807.1| Thymidylate kinase [Methanosarcina mazei Go1] Length = 206 Score = 85.5 bits (210), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 19/216 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T ++ + + +D TREP GT A + + S E Sbjct: 3 GKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAIQS----ET 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +F A +H+ +++PAL GK ++ DR+ DS YAYQG S+ F + L+ Sbjct: 59 DQLAELFLFTADHAEHLAKLVKPALANGKNVISDRYSDSRYAYQGVTLKSR--FENPLEW 116 Query: 123 I----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + S V+PD T + D+ +I ++R R + FE+ + + + R+ FL Sbjct: 117 VRSLHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQTK------FEKIEFL--QNVRENFL 168 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A P R ++D++ + V ++ V E +Q+ Sbjct: 169 ILAAEDPGRFVVIDASRPQEEVEKKVIKKVLEFIQR 204 >gi|315585861|gb|ADU40242.1| thymidylate kinase [Helicobacter pylori 35A] Length = 191 Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKNRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQSVLPEKIILLMIDKE-GLKQ---RLSLK 132 >gi|308183576|ref|YP_003927703.1| thymidylate kinase [Helicobacter pylori PeCan4] gi|308065761|gb|ADO07653.1| thymidylate kinase [Helicobacter pylori PeCan4] Length = 191 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 59/162 (36%), Positives = 93/162 (57%), Gaps = 23/162 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 ++++ EG++G GK+T + LLK RF + VT+EPGGT E+ R + L+ + E Sbjct: 1 MYVALEGVDGVGKSTQVGLLKDRF-----KNALVTKEPGGTKIGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E ++++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKRLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + Q V+PD I+L + + GLK+ R SL+ LD E + Sbjct: 106 ATQSVLPDKIILLLIDKE-GLKQ---RLSLK---SLDKIENQ 140 >gi|291288268|ref|YP_003505084.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809] gi|290885428|gb|ADD69128.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809] Length = 211 Score = 85.1 bits (209), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 2/146 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ +GI+G GK+T + + L + +V +TREPGGT A R +L+S D Sbjct: 6 LFIAVDGIDGCGKSTLSAGMAEKLDKLGRNVKLTREPGGTDAGLLIRQLLVSKKYD-LEP 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E +++ A RL+H ++ P L +G ++ DRF+ S+YAYQ LD L S Sbjct: 65 QSELMLYCADRLEHQTKLVIPVLEKGFDVISDRFVSSTYAYQIFGRGLDKDLLDYLTGYS 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150 ++ MPD T I+++ + L+R +R Sbjct: 125 IRR-MPDITFIIEIDPETALERAMSR 149 >gi|317010152|gb|ADU80732.1| thymidylate kinase [Helicobacter pylori India7] Length = 191 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 16/133 (12%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKIGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIIL 136 + Q ++P+ I+L Sbjct: 106 ATQSILPEKIILL 118 >gi|197294352|ref|YP_001798893.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|197294409|ref|YP_001798950.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853679|emb|CAM11562.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853736|emb|CAM11659.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 84.7 bits (208), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 23/222 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L + + Sbjct: 5 LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A L + +I PAL+ G ++L DR+ DS++AYQ + + ++D +I+ Sbjct: 63 TKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGN-----YIDYDDKITS 117 Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQI 176 + + P T LD+ IGLKR Q ++ L E L+YF K+V H +Q Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQK 175 Query: 177 FLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + + + CH ++++ +S + I+ I L+ K++ Sbjct: 176 YCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|197294763|ref|YP_001799304.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171854090|emb|CAM12069.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 23/222 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L + + Sbjct: 5 LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A L + +I PAL+ G ++L DR+ DS++AYQ + + ++D +I+ Sbjct: 63 TKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGN-----YIDYDDKITS 117 Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQI 176 + + P T LD+ IGLKR Q ++ L E L+YF K+V H +Q Sbjct: 118 KIINHFLIKPKLTFYLDIEPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQK 175 Query: 177 FLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + + + CH ++++ +S + I+ I L+ K++ Sbjct: 176 YCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|11497681|ref|NP_068902.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304] gi|6016458|sp|O30175|KTHY_ARCFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|2650584|gb|AAB91163.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304] Length = 196 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 21/205 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGKTT + + L+ K Y V V +EPG + + + + Sbjct: 1 MLIAVEGIDGAGKTTIAAYIAELLKEKGYKVKVLKEPGDSKFGKK-----IKSSEERLSP 55 Query: 65 EAEAIVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E +F R +D EN++ PAL G ++ DR+ S+ AYQ R L + ++I Sbjct: 56 EEELELFLKDREIDARENIL-PALQSGYAVVMDRYYFSNIAYQSARGIDARLIREMNEKI 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI+LD+ +I L+RV+ R L LDY K R+ FL+ N Sbjct: 115 APK---PDLTILLDVEPEIALERVRKRGKLSPFEKLDYL--------RKVRKCFLE---N 160 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + +VD++ + V + ++ Sbjct: 161 ADETTVVVDASKPLEEVKEEVRKVI 185 >gi|197294197|ref|YP_001798738.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853524|emb|CAM11374.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 84.7 bits (208), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 112/217 (51%), Gaps = 13/217 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L + + Sbjct: 5 LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A + + +I PAL+ G ++L DR+ DS++AYQ + + + + + I+ Sbjct: 63 TKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITSKIINY 122 Query: 126 QEVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + P T LD+ IGLKR Q ++ L E L+YF K+V H +Q + + + Sbjct: 123 FLIKPKLTFYLDIDPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQKYCNDS 180 Query: 182 RNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + CH ++++ +S + I+ I L+ K++ Sbjct: 181 NCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|294496621|ref|YP_003543114.1| thymidylate kinase [Methanohalophilus mahii DSM 5219] gi|292667620|gb|ADE37469.1| thymidylate kinase [Methanohalophilus mahii DSM 5219] Length = 199 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 22/206 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G ++ EGI+G+GKTT + L+ Q Y D+ TREP +A + S VD Sbjct: 3 GKLVTLEGIDGSGKTTIMEYLE---QNPIYSDIIFTREPTKDWIGQAVIRAIHS-DVDPL 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++F A +H+ N I PA+ G++++ DR+ DS AYQ + + F D ++ Sbjct: 59 ---AELLLFTADHAEHIRNTIIPAVQAGRVIISDRYSDSRIAYQSS--TLKDRFDDPVEW 113 Query: 123 ISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 I V+PD T++LD+ +I + R +R + + FE+ D + + R +FL Sbjct: 114 IKQLHRGWSVVPDLTLLLDIDPEIAVSRCNSRDAQTK------FEKVDFL--SQVRNVFL 165 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 +A P R I+D++ + V + Sbjct: 166 QLAEENPQRFVIIDASQGLEKVKKEV 191 >gi|317013243|gb|ADU83851.1| thymidylate kinase [Helicobacter pylori Lithuania75] Length = 191 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVELLKNRF-----KNALFTKEPGGTKMGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132 >gi|115376927|ref|ZP_01464147.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|310820577|ref|YP_003952935.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|115366038|gb|EAU65053.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|309393649|gb|ADO71108.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] Length = 564 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 14/198 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 +FI FEGI+G+GKTT +LL L+R+ Y V RE G +P A R + E Sbjct: 1 MFIDFEGIDGSGKTTLSNLLAARLRRQGYKVAHAREGGELQSPIARRVRDFTRDSKLLEM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121 GA E + A +E VI PAL G++ + DR+L S A G + L L+ L Sbjct: 61 GARTEFFLNLARDAQQLEEVISPALCRGEVCISDRYLYSQLALSG---GGRGLPLEDLAP 117 Query: 122 --EISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVM---IHEKRRQ 175 E++ + + PD I++D+ D L R++ R ++E D RK + + + R+ Sbjct: 118 ACELASKGIWPDLVILVDVEPD--LARLRKRLGKVKEGRNSDGDSRKGLAGAGLSVRVRE 175 Query: 176 IFLDIARNQPDRCHIVDS 193 FL++AR P R ++++ Sbjct: 176 AFLEMARKDPARWLVIEN 193 >gi|197294219|ref|YP_001798760.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|197294324|ref|YP_001798865.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|197294822|ref|YP_001799363.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853546|emb|CAM11406.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853651|emb|CAM11530.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171854149|emb|CAM12141.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/222 (28%), Positives = 114/222 (51%), Gaps = 23/222 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L + + Sbjct: 5 LISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISPK 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A + + +I PAL+ G ++L DR+ DS++AYQ + + ++D +I+ Sbjct: 63 TKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGN-----YIDYDDKITS 117 Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQ----NRYSLRESACLDYFERKDVMIHEKRRQI 176 + + P T LD+ IGLKR Q ++ L E L+YF K+V H +Q Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHKLDLIEKKPLNYF--KNVRAHYLNQQK 175 Query: 177 FLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + + + CH ++++ +S + I+ I L+ K++ Sbjct: 176 YCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|217031818|ref|ZP_03437321.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128] gi|298735556|ref|YP_003728077.1| dTMP kinase [Helicobacter pylori B8] gi|216946470|gb|EEC25072.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128] gi|298354741|emb|CBI65613.1| dTMP kinase [Helicobacter pylori B8] Length = 191 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 ++++ EG++GAGK+T + LLK RF + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVALEGVDGAGKSTQVGLLKTRF-----KNALFTKEPGGTKIGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +HVE+VI+PAL E ++++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHVESVIKPALKEKRLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132 >gi|33860690|ref|NP_892251.1| thymidylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|46576452|sp|Q7V3E6|KTHY_PROMP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33633632|emb|CAE18589.1| Thymidylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 214 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 59/187 (31%), Positives = 92/187 (49%), Gaps = 13/187 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI EGI+G GKTT I + ++ L R + TREPGG+ + R+++L Sbjct: 3 GKFIVIEGIDGCGKTTQIDEISKWIPTSGLLRGKQKLVKTREPGGSLLGKKIRNLILDNH 62 Query: 59 VDEFGAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D + AE ++++A R +H+ I PAL +L DRF DS+ AYQG + + Sbjct: 63 KDNKPSSLAELLLYSADRAEHISKTISPALENQDWVLSDRFCDSTLAYQGYGRNINLEII 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ I Q PD TI L++ + + R RE D E + + EK + F Sbjct: 123 KNIESIVCQGESPDLTIFLEISAEESVLR-------REKFIPDRMESEGIKFLEKVNEGF 175 Query: 178 LDIARNQ 184 IA+ + Sbjct: 176 KLIAKEK 182 >gi|317181157|dbj|BAJ58943.1| thymidylate kinase [Helicobacter pylori F32] Length = 191 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGENLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P I+L + + GLK+ R SL+ Sbjct: 106 ATQSVLPKKIILLLIDKE-GLKQ---RLSLK 132 >gi|261838748|gb|ACX98514.1| thymidylate kinase [Helicobacter pylori 51] Length = 191 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --TRAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQSVLPEKIILLVIDKE-GLKQ---RLSLK 132 >gi|317182679|dbj|BAJ60463.1| thymidylate kinase [Helicobacter pylori F57] Length = 191 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKGRF-----KSALFTKEPGGTRMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQSVLPEKIILLMIDKE-GLKQ---RLSLK 132 >gi|317178179|dbj|BAJ55968.1| thymidylate kinase [Helicobacter pylori F16] Length = 191 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/151 (37%), Positives = 88/151 (58%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRHIALNESISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q V+P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQGVLPEKIILLVIDKE-GLKQ---RLSLK 132 >gi|288921143|ref|ZP_06415431.1| thymidylate kinase [Frankia sp. EUN1f] gi|288347452|gb|EFC81741.1| thymidylate kinase [Frankia sp. EUN1f] Length = 859 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 1/149 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLFI+ EG AG + LL+ +L +V V RE GTP + + R LL Sbjct: 598 HAGLFITIEGDTAAGAEGQLDLLQEWLAASGREVVVVREKTGTPISASVRE-LLDAPSTR 656 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A++ AA R + V +I PAL G I+L DR+ SS A+QG L +L Sbjct: 657 PHFRTVALLDAADRAEQVARIIEPALARGAIVLADRYAASSKAFQGADPRLDQDELAALA 716 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + + ++PD T++LDLP + R R Sbjct: 717 QWATHSLLPDVTVLLDLPTERKAPRPTTR 745 >gi|109948201|ref|YP_665429.1| thymidylate kinase [Helicobacter acinonychis str. Sheeba] gi|123173187|sp|Q17V96|KTHY_HELAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|109715422|emb|CAK00430.1| tmk [Helicobacter acinonychis str. Sheeba] Length = 191 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 60/163 (36%), Positives = 87/163 (53%), Gaps = 21/163 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+G GK+T I LLK Q + T+EPGGT E RH+ L + E Sbjct: 1 MYVVLEGIDGVGKSTQIELLKSAFQNALF----TKEPGGTKIGETLRHIALHENLSEL-- 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SS L L ++ Sbjct: 55 -ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSA--FSSLELNL-----LA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 Q ++P I+L + + GLK R SL+ LD E + V Sbjct: 107 TQSILPAKIILLWIDKE-GLKE---RLSLK---SLDKIENQGV 142 >gi|149923263|ref|ZP_01911673.1| thymidylate kinase [Plesiocystis pacifica SIR-1] gi|149815860|gb|EDM75380.1| thymidylate kinase [Plesiocystis pacifica SIR-1] Length = 210 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 15/212 (7%) Query: 1 MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 MN+ + F+ FEGI+G+G TT + + L+ + + V TR+P P R +L G Sbjct: 1 MNTPIPRFLVFEGIDGSGTTTQLRRVSEALRERGHRVVETRQPSPGPIGALTRELLAVDG 60 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G E A++FAA RL+H+ V+ PAL EG ++LCDR++ SS+ YQ S Sbjct: 61 GKARTVGPEGLALMFAADRLEHLARVVEPALSEGAVVLCDRYVVSSWVYQ-----SLDCD 115 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ I+ PD T + DL D + + E+ + ER DV ++R Sbjct: 116 RAWVRTINTHARWPDRTYVFDL--DPEIALARVAARRAETGQV--VERFDVPDTQRRLAA 171 Query: 177 FLDIARNQPDRCHI--VDSAHSFQSVATNILN 206 ++ D + VD+A S +V T I+ Sbjct: 172 GYRAVLDEADLSGLVAVDAAASIDAVTTAIVE 203 >gi|15612432|ref|NP_224085.1| thymidylate kinase [Helicobacter pylori J99] gi|8134530|sp|Q9ZJE5|KTHY_HELPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|4155994|gb|AAD06956.1| THYMIDYLATE KINASE [Helicobacter pylori J99] Length = 191 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 23/164 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + Q V+P+ I+L I + ++ R SL+ LD E + + Sbjct: 106 ATQSVLPEKIILL----LINKENLKQRLSLK---SLDKIENQGI 142 >gi|257457560|ref|ZP_05622727.1| thymidylate kinase [Treponema vincentii ATCC 35580] gi|257444946|gb|EEV20022.1| thymidylate kinase [Treponema vincentii ATCC 35580] Length = 209 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 67/211 (31%), Positives = 102/211 (48%), Gaps = 15/211 (7%) Query: 6 FISFEGIEGAGKTTHISLLKR-FLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 F+ FEG++G G T+ + LL+ F R D V+ T EP G + R L G F Sbjct: 6 FVVFEGLDGTGTTSQLRLLREAFTTRGLQDTVYFTCEPTGDSIGKLIREAL--SGAAGFD 63 Query: 64 AEAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ A +F A R +HV ++ I L GK + DR+L SS AYQG D+ + L Q Sbjct: 64 AKTIAYLFGADRCEHVYGKSGILTQLQAGKAVFSDRYLFSSLAYQG-LDAGKEL----AQ 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ +P+ DLP + R++ R RE + F++K + + + IF A Sbjct: 119 TINAPFPLPEYLFFFDLPASTAMARIEKRNIPREIYEKETFQQK---VAAEYQAIFRHYA 175 Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211 PD R +D++ + + + NI IV L Sbjct: 176 ETAPDMRILRIDASKTIEEIHENIWRIVCNL 206 >gi|197294449|ref|YP_001798990.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853776|emb|CAM11708.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 20/195 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ISFEG++G+GKTT I+ LK++ + K Y + V + G + + R++ L + + Sbjct: 5 LISFEGVDGSGKTTLINELKKYFENKGYQIKVFQGLGSSIVGKEIRNLFLHQS--KISPK 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A L + +I PAL+ G ++L DR+ S++AYQ + + ++D +I+ Sbjct: 63 TKYLLSLANMLQTQDELIIPALLSGYLVLVDRWYGSTFAYQSKGN-----YIDYDDKITS 117 Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + P T LD+ IG++R QN+ + + LD ERK + E R+ +L Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK----LDLIERKPLNYFENVRKHYL-- 171 Query: 181 ARNQPDRCHIVDSAH 195 NQ C+ + H Sbjct: 172 --NQHKYCNDANYNH 184 >gi|308185243|ref|YP_003929376.1| thymidylate kinase [Helicobacter pylori SJM180] gi|308061163|gb|ADO03059.1| thymidylate kinase [Helicobacter pylori SJM180] Length = 191 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKIGENLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +HVE+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q ++P+ I+L + + GLK+ R SL+ Sbjct: 106 ATQSILPEKIILLVIDEE-GLKQ---RLSLK 132 >gi|210135641|ref|YP_002302080.1| thymidylate kinase [Helicobacter pylori P12] gi|238057699|sp|B6JNX2|KTHY_HELP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|210133609|gb|ACJ08600.1| thymidylate kinase [Helicobacter pylori P12] Length = 191 Score = 82.4 bits (202), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 28/179 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK K + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKN----KFKNALFTKEPGGTKIGESLRRIALNENISEL-- 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E K+++ DR L S AY SS L L ++ Sbjct: 55 -ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYS--EFSSLELNL-----LA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 Q ++P ++L + + GLK+ R SL+ LD E + + + L I RN Sbjct: 107 TQSILPTKIVLLLIDKE-GLKQ---RLSLK---SLDKIENQGI-------EKLLTIQRN 151 >gi|281490597|ref|YP_003352577.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147] gi|161702099|gb|ABX75570.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147] Length = 199 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 104/213 (48%), Gaps = 18/213 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 L I FEG++G+GKTT I +L ++ + K +V T++P + L G+ Sbjct: 3 NLLIVFEGLDGSGKTTQIDMLHQWFENKKLEVFTTKQPTDYYRNDKRVRDYLDNGIAP-N 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + A++ AA R + + I P + E I +CDR+L SS A+ R D + L ++ Sbjct: 62 MYSIALLAAADRTYQISSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEILMINKGV 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I PD T+ LD+P + L+RV+ R+ + Y E K+ ++ + RQ FLD+ Sbjct: 121 PI------PDVTVFLDVPPERALERVRQ----RDGEDIKY-EEKNELVFNQVRQNFLDVL 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P IVDS V I N V E++ K Sbjct: 170 ---PKNALIVDSTLGIDKVHQIITNFVSEVMGK 199 >gi|162449104|ref|YP_001611471.1| putative thymidylate kinase [Sorangium cellulosum 'So ce 56'] gi|161159686|emb|CAN90991.1| putative Thymidylate kinase [Sorangium cellulosum 'So ce 56'] Length = 208 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 10/155 (6%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDEFGA 64 FEGI+GAG +T L+ VHVTREP P R VL G + A Sbjct: 3 FEGIDGAGTSTQAERFAAHLRAARRMVHVTREPSAGPVGALLRQVLTHRISLPGARQ--A 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL 120 E A++F+A RLDH+ I P L +G +++ DR+ SS AYQ GE + ++ + Sbjct: 61 EIMALLFSADRLDHLGAEIEPLLRDGYVVISDRYDLSSLAYQSTTAGEDGAGSGAIVEWI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 +E++ + PD T+++D+ +I KR + R E Sbjct: 121 RELNRHALRPDVTVVIDVAPEIAEKRRRGRGGAEE 155 >gi|146320508|ref|YP_001200219.1| thymidylate kinase [Streptococcus suis 98HAH33] gi|145691314|gb|ABP91819.1| Thymidylate kinase [Streptococcus suis 98HAH33] Length = 169 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 4/162 (2%) Query: 47 AEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 AE R+++L+ + E ++F AAR H++ I P L +GK+LL DRF+DSS AYQ Sbjct: 4 AEEIRNIILNPANTAMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQ 63 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 G + L + + + PD T+ D+ + GL R+ R + R+ LD E+ D Sbjct: 64 GFGRGLDIGDIHWLNQFATDGLKPDLTLYFDIDTEEGLARIA-RNADRDVDRLD-MEKAD 121 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +H + RQ +L I +P+R +D++ ++V N L ++ Sbjct: 122 --MHRRVRQGYLSILEQEPERFVKIDASQPLEAVVANALAVI 161 >gi|197294491|ref|YP_001799032.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853818|emb|CAM11759.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 62/221 (28%), Positives = 113/221 (51%), Gaps = 23/221 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L + + Sbjct: 6 ISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLH--QSKISLKT 63 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + ++ A L + +I PAL+ G ++L DR+ S++AYQ + + ++D +I+ + Sbjct: 64 KYLLSLANMLQTQDELIFPALLSGYLVLVDRWYGSTFAYQSKGN-----YIDYDDKITSK 118 Query: 127 -----EVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYFERKDVMIHEKRRQIF 177 + P T LD+ IG++R QN + L E L+YF K+V H +Q + Sbjct: 119 IINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHKLDLIERKPLNYF--KNVRAHYLNQQKY 176 Query: 178 LDIARNQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + + CH ++++ +S + I+ I L+ K++ Sbjct: 177 CNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|108757704|ref|YP_630801.1| putative thymidylate kinase [Myxococcus xanthus DK 1622] gi|108461584|gb|ABF86769.1| putative thymidylate kinase [Myxococcus xanthus DK 1622] Length = 566 Score = 81.6 bits (200), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 14/198 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 +FI FEGI+G+GKTT +LL L+R Y V RE G PAA R + + E Sbjct: 1 MFIDFEGIDGSGKTTLSNLLAAKLKRLGYRVAHAREGGELQAPAARRIRELTRDSRLLEM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121 E + A ++ V+ PAL G++ + DR+L S A G + L +D L+ Sbjct: 61 SPRTEFFLNLARDAQQLDEVVAPALSRGEVCITDRYLYSQLALSG---GGRGLPMDELRP 117 Query: 122 --EISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFERKDVM---IHEKRRQ 175 E++ Q + PD I++D VD L R++ R L+ D RK ++ + + R+ Sbjct: 118 ACELASQGLWPDLVILVD--VDPDLARLRKRLGKLQSKRVSDGDSRKGLVGAGLAVRVRE 175 Query: 176 IFLDIARNQPDRCHIVDS 193 FL++AR P R I+++ Sbjct: 176 SFLEMARKDPQRWIILEN 193 >gi|15646083|ref|NP_208265.1| thymidylate kinase [Helicobacter pylori 26695] gi|6016459|sp|O26009|KTHY_HELPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|2314650|gb|AAD08513.1| thymidylate kinase (tmk) [Helicobacter pylori 26695] Length = 191 Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 61/164 (37%), Positives = 90/164 (54%), Gaps = 23/164 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVELLKDRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + Q V+P IIL L GLK+ R SL+ LD E + + Sbjct: 106 ATQSVLP-AKIILLLIDKEGLKQ---RLSLK---SLDKIENQGI 142 >gi|254779984|ref|YP_003058091.1| thymidylate kinase [Helicobacter pylori B38] gi|254001897|emb|CAX30150.1| Thymidylate kinase (dTMP kinase) [Helicobacter pylori B38] Length = 191 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 87/151 (57%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVELLKNRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +HVE+VI+PAL E K+++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYS--EFSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q ++P+ ++L + + GLK+ R SL+ Sbjct: 106 ATQSILPEKIVLLVIDEE-GLKQ---RLSLK 132 >gi|148241353|ref|YP_001226510.1| thymidylate kinase [Synechococcus sp. RCC307] gi|166223123|sp|A5GQJ8|KTHY_SYNR3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147849663|emb|CAK27157.1| Thymidylate kinase [Synechococcus sp. RCC307] Length = 212 Score = 81.3 bits (199), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 7/168 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58 G F+ EGI+G GKTT + L +L + TREPGGT +A R +LL Sbjct: 3 GRFLVLEGIDGCGKTTQLKALADWLPASGLMPSGAQLITTREPGGTALGQALRQLLLHPP 62 Query: 59 VDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++ A AE +++AA R HV+ + PAL G +L DR+ S+ AYQG + Sbjct: 63 EEQAPATRAELLLYAADRAQHVQTRLEPALAAGDWVLSDRYCGSTAAYQGYGRGLDLDLI 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFER 164 L++++ + PD + L+L ++ +R + R E+ L + R Sbjct: 123 TQLEQLATAGLQPDLCLWLELSPELAAQRRSGQQQDRIEAEGLAFLAR 170 >gi|312137024|ref|YP_004004361.1| thymidylate kinase [Methanothermus fervidus DSM 2088] gi|311224743|gb|ADP77599.1| thymidylate kinase [Methanothermus fervidus DSM 2088] Length = 189 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I EGI+GAGK+ + LL L++ Y V +EP + + R +L E Sbjct: 1 MYICIEGIDGAGKSLQVKLLSEKLKKCGYKVIQIKEPTDSEIGKLIRKLLRK----EVNN 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++FAA R+ E I+ L +G +++ DR L SS+ YQ S + D ++E++ Sbjct: 57 ALMTLLFAADRIILSEK-IKKLLKKGYLVISDRCLWSSFVYQ-----SIDIGEDWVEEVN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD TI LD+ VD+ +KR + + S+ L+ RK + + +K I Sbjct: 111 KYALKPDITIFLDVDVDVAMKRCEKKEIFENSSYLNKARRKYLQLAKKHNFI-------- 162 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 I+D+ + ++V IL ++ +QK+ Sbjct: 163 -----IIDANNDIKTVHNEILKVIAAKIQKK 188 >gi|950071|emb|CAA83746.1| ATP-bind. pyrimidine kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 98 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 38/83 (45%), Positives = 56/83 (67%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPAL 87 EA++F A+R H++ VI+PAL Sbjct: 61 WTEALLFIASRNQHLQKVIKPAL 83 >gi|308064233|gb|ADO06120.1| thymidylate kinase [Helicobacter pylori Sat464] Length = 191 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 30/208 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++G GK+T + LLK RF + T+EPGGT E R + L+ + E Sbjct: 1 MYVVLEGVDGVGKSTQVGLLKDRF-----KNALFTKEPGGTRMGEHLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H+E+VI+PAL E K+++ DR L S AY SQ L+ L + Sbjct: 55 --ARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAY------SQFSSLE-LNLL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q V+PD I+L + + GLK+ R SL+ LD E + + L I + Sbjct: 106 ATQSVLPDKIILLLIDKE-GLKQ---RLSLK---SLDKIENQGT-------EKLLTIQQK 151 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 H + + + + VW+L Sbjct: 152 LKTHAHALKEKFGCEVLELDAQKSVWDL 179 >gi|307718813|ref|YP_003874345.1| thymidylate kinase [Spirochaeta thermophila DSM 6192] gi|306532537|gb|ADN02071.1| thymidylate kinase [Spirochaeta thermophila DSM 6192] Length = 242 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 94/171 (54%), Gaps = 14/171 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ FEGI+GAG TT + + L+ + + + TREP P R L S G+ F A Sbjct: 43 FVVFEGIDGAGTTTQLGKVASSLKGRGHTLWETREPTDGPVGTFIRECLAS-GLS-FPAS 100 Query: 66 AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +FAA R HV E+ + + G+I+LCDR+L SS AYQ + ++ L ++++ Sbjct: 101 VYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQSDSAHTREL----VEDL 156 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + + +P+ I LD PV+ L+R+ +R D FE+++V+++ R Sbjct: 157 NRRFPLPEVVIYLDTPVEECLRRLSSR------PRKDLFEQREVLMNVASR 201 >gi|320354474|ref|YP_004195813.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032] gi|320122976|gb|ADW18522.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032] Length = 206 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 2/107 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G+ I+FEGI+G GK+T + LL +L+ + Y V TREP P + R LL Sbjct: 1 MSGGILIAFEGIDGTGKSTQLPLLAAYLRGQGYTVVETREPTDGPYGQQIR--LLYRNRH 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 + E E +F R HVE I+PAL G I+L DR+ S+ AYQG Sbjct: 59 QASPEQELELFLLDRRQHVEQCIKPALARGAIVLTDRYYFSTAAYQG 105 >gi|313622095|gb|EFR92678.1| thymidylate kinase [Listeria innocua FSL J1-023] Length = 136 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQEISVQEVMPDC 132 AR HV IRPAL GK +LCDRF+DSS AYQG RD + L + ++++ +PD Sbjct: 1 ARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL-QVNLYAIEDTIPDR 59 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 T LD+P ++GL R+ RE LD ++D+ HEK + + I + PDR VD Sbjct: 60 TYYLDVPAEVGLARIAANKG-REVNRLD---KEDITYHEKVQNGYEKIIQMFPDRFMRVD 115 Query: 193 SAHSFQSVATNIL 205 + + + + IL Sbjct: 116 ATKTPEEITDIIL 128 >gi|108563864|ref|YP_628180.1| thymidylate kinase [Helicobacter pylori HPAG1] gi|123373654|sp|Q1CRB6|KTHY_HELPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|107837637|gb|ABF85506.1| thymidylate kinase [Helicobacter pylori HPAG1] Length = 191 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 89/162 (54%), Gaps = 23/162 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++G GK+T + LLK RF + T+EPGGT E+ RH+ L+ + E Sbjct: 1 MYVVLEGVDGVGKSTQVGLLKDRF-----KNALFTKEPGGTKMGESLRHIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H E+VI+PAL E ++++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYS--EFSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + Q V+P I+L + + GLK+ R SL+ LD E + Sbjct: 106 ATQSVLPAKIILLVIDKE-GLKQ---RLSLK---SLDKIENQ 140 >gi|34557029|ref|NP_906844.1| thymidylate kinase [Wolinella succinogenes DSM 1740] gi|81653541|sp|Q7M9X1|KTHY_WOLSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|34482744|emb|CAE09744.1| INTEGRAL MEMBRANE PROTEIN WITH KINASE ACTIVITY [Wolinella succinogenes] Length = 190 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 12/159 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EG++ GK+T I+LLKR + T+EPGGT R +LL G + A Sbjct: 1 MYVAIEGVDTCGKSTQIALLKRRFPGAIF----TKEPGGTALGMKLRELLL--GGEAKSA 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R +H+E VI+PAL K+L DR L S AY D L+L SL + Sbjct: 55 KAELLLFLADRAEHMELVIKPAL--DKLLFSDRSLISGMAYAKGWD---ELWLKSLNLFA 109 Query: 125 VQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYF 162 + ++PD +IL+L ++ + Q + ES ++Y Sbjct: 110 TEGIVPDKVVILELTAKELSYRLSQKSHDSIESRGVEYL 148 >gi|307638129|gb|ADN80579.1| Thymidylate kinase [Helicobacter pylori 908] gi|325996729|gb|ADZ52134.1| Thymidylate kinase [Helicobacter pylori 2018] gi|325998323|gb|ADZ50531.1| Thymidylate kinase [Helicobacter pylori 2017] Length = 191 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 20/151 (13%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ R++ L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVELLKTRF-----KNALFTKEPGGTRMGESLRYIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H E+VI+PAL E K+++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYS--EFSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + Q ++P ++L + + GLK+ R SL+ Sbjct: 106 ATQSILPTKIVLLVIDEE-GLKQ---RLSLK 132 >gi|225620556|ref|YP_002721813.1| thymidylate kinase [Brachyspira hyodysenteriae WA1] gi|254808280|sp|C0R1X1|KTHY_BRAHW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225215375|gb|ACN84109.1| thymidylate kinase [Brachyspira hyodysenteriae WA1] Length = 203 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 19/218 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EGI+G+GK++ +L L T EP R +LS + Sbjct: 3 GKLIVLEGIDGSGKSSIGMMLTDILNNIGIKSIYTFEPTHAYYGSKLRESMLS---KDLT 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E +F A R +H++++IRPA+ +G +++ DR++ SS AYQG + + ++ +L + Sbjct: 60 PEEELSLFIADRKEHIKHMIRPAINDGYVIVLDRYMHSSIAYQGAKGIDKE-YIYNLHKD 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + E PD IL L ++ L R+ + + +D FE K + E+ +IF + N Sbjct: 119 FILE--PDLVFILHLNIETALNRI-----MEKRGFVDRFENKHYL--EEVDKIFS--SFN 167 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 +P H +D++ +S+ ILN + E ++ PL S Sbjct: 168 EP-YMHHIDASKDQKSICDEILNTIKE---SKILPLDS 201 >gi|315187239|gb|EFU20996.1| thymidylate kinase [Spirochaeta thermophila DSM 6578] Length = 215 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 14/167 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ FEGI+GAG TT + + L+ + + + TREP P R L S G+ A Sbjct: 16 FVVFEGIDGAGTTTQLRKVASSLKGRGHPLWETREPTDGPVGVFIRECLAS-GLS-LPAS 73 Query: 66 AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +FAA R HV E+ + + G+I+LCDR+L SS AYQ + D ++ L ++++ Sbjct: 74 VYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQSDSDHTREL----VEDL 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + + +P+ I LD PV+ L+R+ +R D FE+++V+++ Sbjct: 130 NHRFPLPEVVIYLDTPVEECLRRLSSR------PQKDLFEQREVLMN 170 >gi|317014888|gb|ADU82324.1| thymidylate kinase [Helicobacter pylori Gambia94/24] Length = 191 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 23/164 (14%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 ++++ EG++GAGK+T + LLK RF + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVALEGVDGAGKSTQVELLKTRF-----KNALFTKEPGGTRMGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A +F + R +H E+VI+PAL E ++++ DR L S AY SS L L + Sbjct: 55 --ARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYSA--FSSLELNL-----L 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + Q ++P ++L + + GLK+ R SL+ LD E + + Sbjct: 106 ATQNILPTKIVLLLIDKE-GLKQ---RLSLK---SLDKIENQGI 142 >gi|296126817|ref|YP_003634069.1| thymidylate kinase [Brachyspira murdochii DSM 12563] gi|296018633|gb|ADG71870.1| thymidylate kinase [Brachyspira murdochii DSM 12563] Length = 203 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 13/175 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I EGI+G+GK+TH LL L T EP R +LS + Sbjct: 2 NGKLIVIEGIDGSGKSTHGMLLTNELNNIGIKSIYTFEPTHAYFGSKLRESMLS---KDL 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E +F A R +HV+N+I+PA+ +G ++ DR++ SS AYQG + + + ++ Sbjct: 59 KPEEELSLFIADRKEHVQNMIKPAINDGYAVILDRYMYSSIAYQGAKGIDREYIYNLHKD 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ PD I LP++ L R+ + + +D FE K+ + +K +IF Sbjct: 119 FIIE---PDLVFIFHLPIETALNRI-----MEKRGFVDRFENKNYL--KKVDEIF 163 >gi|215400691|ref|YP_002332309.1| putative thymidylate kinase [Lactococcus lactis] gi|169641050|gb|ACA61269.1| putative thymidylate kinase [Lactococcus lactis] Length = 251 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 18/213 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 L I FEG++G+GKTT I +L ++ + K V T++P + L G+ Sbjct: 55 NLLIVFEGLDGSGKTTQIDMLYQWFENKKLKVFTTKQPTDYYRNDKRVRDYLDNGIAP-N 113 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + A++ AA R + + I P + E I +CDR+L SS A+ R D + L ++ Sbjct: 114 MYSIALLAAADRTYQITSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEILMINK-- 170 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD T+ LD+P + L RV+ R+ + Y E K+ ++ + RQ FLD+ Sbjct: 171 ----GVPTPDVTVFLDVPPERALDRVRQ----RDGKDIKY-EEKNELVFNQVRQNFLDVL 221 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P IVDS V I N V E++ K Sbjct: 222 ---PKNALIVDSTLGIDKVHQIITNFVSEVMDK 251 >gi|76801882|ref|YP_326890.1| thymidylate kinase [Natronomonas pharaonis DSM 2160] gi|121695514|sp|Q3IRB3|KTHY_NATPD RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|76557747|emb|CAI49330.1| thymidylate kinase [Natronomonas pharaonis DSM 2160] Length = 196 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 24/215 (11%) Query: 5 LFISFEGIEGAGKTT-HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 + I+ EGI+G+GK+T H +L +R + TREP + A + D Sbjct: 1 MLITLEGIDGSGKSTAHAALRERLTAEET---TFTREPTDSWYGSAVERSIGDADADPL- 56 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++ A DH+ V+RPAL G+ ++ DR+ DS YAYQG + + + + + + Sbjct: 57 --AELFLYTADHADHLSRVVRPALEAGEPVVSDRYSDSRYAYQGA--TLEGVIDEPMAYV 112 Query: 124 S-VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V E PD T+ D+P +G +R + + FE D + E R+ + Sbjct: 113 KRVHEPFTRPPDATLYFDVPPTVGAER---------AGATNKFEAADYL--ESVRENYER 161 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +P+R H +D+ S +V + V L+ + Sbjct: 162 LIEAEPERFHRIDATQSESAVVEAAVETVETLLSR 196 >gi|126179517|ref|YP_001047482.1| thymidylate kinase [Methanoculleus marisnigri JR1] gi|166221756|sp|A3CVV0|KTHY_METMJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|125862311|gb|ABN57500.1| thymidylate kinase [Methanoculleus marisnigri JR1] Length = 205 Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 16/202 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G+GK+T ++ L+ + D TREPG T E+ R + + Sbjct: 1 MLITIEGIDGSGKSTLLARLR--ELLADLDPLFTREPGATWVGESVRRAI----AERMDP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQEI 123 EA++F A H++ VIRPAL EG++++ DR+ DS +AYQ D L L+ I Sbjct: 55 ITEALLFCADHAAHIDTVIRPALDEGRLVISDRYADSRFAYQPVVLDGVLPDPLSWLRRI 114 Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T +L LPV+ + R L +YFE + I E+ ++ +L++A Sbjct: 115 HEGWSIRPDRTFLLVLPVEDAVSR------LGPEKKREYFE--NAAILEQVQENYLNLAA 166 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 P R +VD+ + VA I Sbjct: 167 ADPLRFVVVDALLPKEEVARFI 188 >gi|126642563|ref|YP_001085547.1| thymidylate kinase [Acinetobacter baumannii ATCC 17978] Length = 151 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 12/147 (8%) Query: 53 VLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 +LL+ DE + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ S Sbjct: 1 MLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQC---S 57 Query: 112 SQHLFLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + L D LQ ++ V MP+ T LD P+++G+ R RE LD FE++ + Sbjct: 58 GRGLSQDKLQLLNQNFVSRMPEVTFWLDAPIELGMNRA------RERGALDRFEQEKLSF 111 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHS 196 K R+ + + + +P+R +D+ S Sbjct: 112 FTKVREGYETLWKVEPERIKRLDATQS 138 >gi|298674964|ref|YP_003726714.1| thymidylate kinase [Methanohalobium evestigatum Z-7303] gi|298287952|gb|ADI73918.1| thymidylate kinase [Methanohalobium evestigatum Z-7303] Length = 199 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 108/210 (51%), Gaps = 22/210 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T + +R + + +V TREP +A + S D+ Sbjct: 3 GKLITLEGIDGSGKST---ITERLMNHPSLSNVVFTREPTKNWIGKAVEQAIRS-DTDQI 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +F + +H+ I PA+ GK ++ DR+LDS AYQG S + F D ++ Sbjct: 59 ---AEFFLFTSDHAEHISKTIYPAIENGKNVISDRYLDSRCAYQGVTLSEK--FEDPIKW 113 Query: 123 ISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + ++PD TI LD+ + ++R NR + +++ ++ +++ +++ Sbjct: 114 VQKIHDGWTIIPDLTIFLDIDPEFAIERCGNRGEQTKFEKMEFLQQ----VYDNYQRLM- 168 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ P+R +VDS+ + V ++++I+ Sbjct: 169 ---KDNPERFVVVDSSQPIEEVEKDVVDII 195 >gi|212213017|ref|YP_002303953.1| thymidylate kinase [Coxiella burnetii CbuG_Q212] gi|212218894|ref|YP_002305681.1| thymidylate kinase [Coxiella burnetii CbuK_Q154] gi|215918975|ref|NP_819533.2| thymidylate kinase [Coxiella burnetii RSA 493] gi|206583860|gb|AAO90047.2| thymidylate kinase [Coxiella burnetii RSA 493] gi|212011427|gb|ACJ18808.1| thymidylate kinase [Coxiella burnetii CbuG_Q212] gi|212013156|gb|ACJ20536.1| thymidylate kinase [Coxiella burnetii CbuK_Q154] Length = 161 Score = 78.2 bits (191), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 8/159 (5%) Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 5 DTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAGWV 64 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L +A + Sbjct: 65 LGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALANQE 118 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 P R ++ + +V I+ + L+ SPL +K Sbjct: 119 PARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 155 >gi|257052374|ref|YP_003130207.1| thymidylate kinase [Halorhabdus utahensis DSM 12940] gi|256691137|gb|ACV11474.1| thymidylate kinase [Halorhabdus utahensis DSM 12940] Length = 199 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 20/215 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G+GK++ L+ + D TREP + EA V S D+ + Sbjct: 1 MLITLEGIDGSGKSSAWESLREHAADLDPDFTFTREPTESWYGEA---VQRSIQEDDADS 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLDSL 120 AE ++ A H+ N ++PAL G++++ DR+ DS YAYQG +R F+ + Sbjct: 58 LAELFLYTADHAAHLANTVQPALDRGEVVVSDRYSDSRYAYQGATLEDRLDDPLAFVREI 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + PD TI LD+ + G +R S + FER + + R + + Sbjct: 118 HEPWTRP--PDATIYLDVDAETGAER---------SGGTNKFERVEHL--RAVRANYERL 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + PDR +D+ + ++V ++ + V L+ ++ Sbjct: 165 IDDDPDRFVRIDATRAAEAVRADVFDAVERLLSEQ 199 >gi|301305668|ref|ZP_07211757.1| thymidylate kinase [Escherichia coli MS 124-1] gi|300839096|gb|EFK66856.1| thymidylate kinase [Escherichia coli MS 124-1] Length = 134 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 5/116 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLF 116 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQ G R QH+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHML 120 >gi|116754547|ref|YP_843665.1| dTMP kinase [Methanosaeta thermophila PT] gi|116665998|gb|ABK15025.1| thymidylate kinase [Methanosaeta thermophila PT] Length = 202 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 33/226 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G+ I+ EGI+GAGKTT + R L+++ D TREP P E AR + G ++ Sbjct: 4 DRGILITLEGIDGAGKTT----VARMLRKRFPDFVFTREPTDGPLGEMARR---ASGFEQ 56 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLD 118 +F A +H+ + I P++ G++++ DR++DS AYQG R S + Sbjct: 57 L------FLFMADHANHLRSCILPSINSGEVVVSDRYIDSRVAYQGALLRRTISMEWIYE 110 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-- 176 + S +MPD T++ + + L R +NR FE + ++ R + Sbjct: 111 LHRPWS---LMPDLTLLFRIDPSVALMRCKNR------GATSIFEMEALL-----RDVSG 156 Query: 177 -FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 F +A +P+R I+++ VA + + +Q+ L S Sbjct: 157 NFEILASREPERFVIINAEREISEVAERAASEIERFIQQNERQLGS 202 >gi|88603867|ref|YP_504045.1| thymidylate kinase [Methanospirillum hungatei JF-1] gi|121696415|sp|Q2FS90|KTHY_METHJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|88189329|gb|ABD42326.1| thymidylate kinase [Methanospirillum hungatei JF-1] Length = 206 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 61/223 (27%), Positives = 110/223 (49%), Gaps = 24/223 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+G+GK+T L +L + + +T EPG T EA R + + Sbjct: 1 MLVTIEGIDGSGKSTLHKALGPYL--ADLNPVITCEPGSTWIGEAVRRAIR----EHADP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AEA++F A H+ V+RPAL E ++++ DR++DS YQ + + + D + Sbjct: 55 IAEALLFVADHAAHLREVVRPALSEDRLVISDRYIDSRLVYQ--QVTLDGIIPDPRTWLR 112 Query: 125 V----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +MPD TI+L +PV + L+R R S ++FE++ V+ K ++ ++ + Sbjct: 113 AVHQGWTIMPDLTILLAVPVPVALERTGKRGS------GEHFEQESVLT--KVQEYYMQL 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 R I+D + +IL + E ++ R ++ KK Sbjct: 165 VEEDTARFLILDGTLPPE----HILKVAGEAIRFRFDEMNRKK 203 >gi|284163929|ref|YP_003402208.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511] gi|284013584|gb|ADB59535.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511] Length = 205 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT + LQ + D TREP T + V S D+ + Sbjct: 1 MLVTLEGLDGSGKTT----VWEALQERYPDAVFTREP--TNDSWYGDAVYRSIRDDDADS 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE- 122 AE ++ A DH+ VI PAL G ++L DR+ DS +AYQG ++S L +D E Sbjct: 55 LAELFLYTADHADHLSRVIEPALEAGDLVLSDRYSDSRFAYQGATLEASDRLAVDDHLEY 114 Query: 123 -ISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + V E + PD TI LD+ + +R + + FER D + E R + Sbjct: 115 VVDVHEPFSIPPDLTIYLDVDPETAAER---------AGATNKFERVDYL--ESVRDNYE 163 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +PDR +D+ +V +L + Sbjct: 164 RLLEREPDRFVRIDATQEPDAVLEAVLGTL 193 >gi|195952508|ref|YP_002120798.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1] gi|195932120|gb|ACG56820.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1] Length = 200 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 20/202 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEGI+G+GK+T I+++ L+ +N V + REPG T E R +L S +D + Sbjct: 12 IVFEGIDGSGKSTQINIVYELLKYEN--VKLLREPGSTEMGEKIRDILKSQKLD---PKT 66 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + A+R +E + EG ILL DR++ S+ AYQG FL +L + Sbjct: 67 QTFLIEASRAHMIEKHFKG--FEG-ILLLDRYIYSTIAYQGYGFGIDINFLKALNDFVCD 123 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 +PD + D+ L+R++ RE D FE D+ +K R +L +A+ Sbjct: 124 IYIPDIVFLFDIDPRTALERLK-----REK---DMFE--DLEFLKKVRDGYLKLAKEY-- 171 Query: 187 RCHIVDSAHSFQSVATNILNIV 208 + +D++ + +++ I NI+ Sbjct: 172 NFYTIDASKNVEAITNEITNIL 193 >gi|289644563|ref|ZP_06476634.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] gi|289505631|gb|EFD26659.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] Length = 210 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 9/136 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G F++ +G G GK+T + L L + V T+EP +P R G D Sbjct: 1 MNRGFFVAIDGPSGIGKSTVTAALAGQLAGQGLPVLATKEPTASPLGSLTRF-----GTD 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ A A + AA R H+E IRPAL G +++CDR++ SS Q D FL +L Sbjct: 56 DYQGLALACLVAADRYQHLETEIRPALASGTVVVCDRYVASSLVLQ-RLDGVPPKFLWAL 114 Query: 121 QEISVQEVMPDCTIIL 136 E Q PD T+IL Sbjct: 115 AE---QADRPDLTVIL 127 >gi|197122531|ref|YP_002134482.1| dTMP kinase [Anaeromyxobacter sp. K] gi|196172380|gb|ACG73353.1| dTMP kinase [Anaeromyxobacter sp. K] Length = 219 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 10/165 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----SCGVD 60 F+ EG++GAG TT LL L+ HVT EP G P R VL + G D Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGAAGAD 77 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F A A++FAA R DH I P L G ++ DR+ SS AYQG ++ + Sbjct: 78 -FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWV 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 ++++ PD T+ L + ++ L+R + RE + F+RK Sbjct: 133 RQVNGAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRK 177 >gi|15668468|ref|NP_247266.1| thymidylate kinase [Methanocaldococcus jannaschii DSM 2661] gi|2497577|sp|Q57741|KTHY_METJA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|1591015|gb|AAB98278.1| thymidylate kinase (tmk) [Methanocaldococcus jannaschii DSM 2661] Length = 188 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 24/181 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +FI FEGI+G+GKTT LL K D T EP + + R +L G Sbjct: 1 MVDNMFIVFEGIDGSGKTTQSKLL-----AKKMDAFWTYEPSNSLVGKIIREIL--SGKT 53 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + A++FAA R++H + +I+ L + + +CDR+L SS AYQ ++ F+ S+ Sbjct: 54 EVDNKTLALLFAADRIEHTK-LIKEELKKRDV-VCDRYLYSSIAYQSVAGVDEN-FIKSI 110 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ PD +L + ++ LKRV+ + D FE+KD + +K + +L++ Sbjct: 111 NRYALK---PDIVFLLIVDIETALKRVKTK---------DIFEKKDFL--KKVQDKYLEL 156 Query: 181 A 181 A Sbjct: 157 A 157 >gi|254166701|ref|ZP_04873555.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|289596133|ref|YP_003482829.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|197624311|gb|EDY36872.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|289533920|gb|ADD08267.1| thymidylate kinase [Aciduliprofundum boonei T469] Length = 197 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 19/208 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GK+T + + L +D+ +T EP T + R + +E Sbjct: 1 MFIVFEGIDGSGKSTIARRIAKHLSSLGHDIFLTEEPTTTWMGKDVRRAI----EEEKNP 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 ++A++F A R +HVE I+ L +GKI++ DR++ S++AYQG + +L+ + Sbjct: 57 LSQALLFFADRAEHVE-AIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115 Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V E M PD I+L + GL V R +E FER++ + E+ + I++D+ Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR-DFKEK-----FEREEFL--ERVQDIYMDL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +VDS + V ++ I+ Sbjct: 168 ADKYG--FFVVDSNRNLNEVYEDVRKII 193 >gi|86158146|ref|YP_464931.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774657|gb|ABC81494.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] Length = 218 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 54/166 (32%), Positives = 79/166 (47%), Gaps = 8/166 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGV 59 G F+ EG++GAG TT LL L+ HVT EP G P R VL G Sbjct: 15 GRFVVVEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVGGGGG 74 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +F A A++FAA R DH I P L G ++ DR+ SS AYQG ++ Sbjct: 75 ADFDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEW 130 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 ++ ++ PD T+ L + ++ L+R + RE + F+R+ Sbjct: 131 VRTVNAAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRR 176 >gi|15639345|ref|NP_218794.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025587|ref|YP_001933359.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14] gi|23821760|sp|O83373|KTHY_TREPA RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP kinase gi|3322633|gb|AAC65341.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018162|gb|ACD70780.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14] gi|291059744|gb|ADD72479.1| thymidylate kinase [Treponema pallidum subsp. pallidum str. Chicago] Length = 208 Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 10/147 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ FEGI+G G +T + L+R Q + D+ T+EP G R VL + ++ Sbjct: 7 FVVFEGIDGTGTSTQLRALERHFQARK-DMVFTQEPTGGEIGTLIRDVLQKRVI--MSSK 63 Query: 66 AEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++FAA R +H+E I L EGKI+LCDR++ SS YQG S + E+ Sbjct: 64 ALGLLFAADRHEHLEGAGGINDCLAEGKIVLCDRYVFSSLVYQGMAVSGSFAY-----EL 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150 + + +P+ D P+++ ++R+ R Sbjct: 119 NKEFPLPEVVFYFDAPIEVCVERITAR 145 >gi|296109540|ref|YP_003616489.1| thymidylate kinase [Methanocaldococcus infernus ME] gi|295434354|gb|ADG13525.1| thymidylate kinase [Methanocaldococcus infernus ME] Length = 184 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 56/178 (31%), Positives = 90/178 (50%), Gaps = 24/178 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT +L + L + T EP R L S +D Sbjct: 1 MFIVFEGIDGSGKTTLSKMLAKELSG-----YWTCEPTDGEIGRLIRSYLSSGNIDNISL 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +++FAA R++H + I L G+ ++CDR+L SS AYQ ++ L EI+ Sbjct: 56 ---SLLFAADRVEHCKE-IEKVLNSGRDVICDRYLYSSIAYQSSLGVEENF----LWEIN 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD +L + VD +KRV+ + D FE K+ + EK ++ +L++A+ Sbjct: 108 KYAIKPDLVFLLVVDVDEAMKRVKGK---------DIFENKNFL--EKVQEKYLELAK 154 >gi|220917316|ref|YP_002492620.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955170|gb|ACL65554.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1] Length = 219 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 10/165 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-----CGVD 60 F+ EG++GAG TT LL L+ HVT EP G P R VL G D Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGVAGAD 77 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F A A++FAA R DH I P L G ++ DR+ SS AYQG ++ + Sbjct: 78 -FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWV 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 ++++ PD T+ L + ++ L+R + RE + F+RK Sbjct: 133 RQVNGAAGPPDATLFLRVRPEVALRRRRAASLDREIYEVGAFQRK 177 >gi|256372673|ref|YP_003110497.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331] gi|256009257|gb|ACU54824.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331] Length = 194 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 20/200 (10%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 +G + GK+T + L ++ + DV R+PGG PAAEA R V+ + + + AE Sbjct: 3 LDGPDKVGKSTQVHLAVAAVRARGVDVVTARDPGGDPAAEALREVVKTRSLAPW---AEL 59 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + FAAAR V V+RPA+ G ++ DR+ S+ YQG + ++ +L+ ++ V Sbjct: 60 LTFAAARAQLVATVVRPAVEAGTHVILDRYFPSTIVYQGPKVGEDAIW--ALEALTGDPV 117 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 D ++LD +GL D FE E+ R + D AR+ R Sbjct: 118 A-DLVLVLDRAEPLGLD------------AGDRFEAGGRSAWEQIRARYADRARSWGWR- 163 Query: 189 HIVDSAHSFQSVATNILNIV 208 +VD+ S +VA + ++ Sbjct: 164 -LVDANGSRDAVAARVQAMI 182 >gi|302543876|ref|ZP_07296218.1| dTMP kinase [Streptomyces hygroscopicus ATCC 53653] gi|302461494|gb|EFL24587.1| dTMP kinase [Streptomyces himastatinicus ATCC 53653] Length = 256 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 9/148 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+F++ +G G GK+T + + L+ H TREP T AR G D++ Sbjct: 59 TGMFVTIDGPGGVGKSTLTAAVVAELRAACVTAHATREPSDTALGRLARQ-----GTDDY 113 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A A + AA R H+E+ IRPA+ G +++CDR++ SS Q + D + E Sbjct: 114 RGMAMACLIAADRYQHLEDEIRPAVARGDVVVCDRYVASSLVLQ----VMDGVGRDLVWE 169 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR 150 ++ MPD +IL+ D+ KR+ R Sbjct: 170 LNRHADMPDLAVILNARDDVIEKRLTER 197 >gi|206896205|ref|YP_002246823.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265] gi|238057696|sp|B5Y7S6|KTHY_COPPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|206738822|gb|ACI17900.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265] Length = 193 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 53/180 (29%), Positives = 92/180 (51%), Gaps = 12/180 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EGI+G GK+T SLL + +K H T EPG R +++ + F Sbjct: 1 MFIVVEGIDGCGKSTVASLLAAEIGKKRPVFH-TFEPGHVRDG-LYRELIMENVDNPF-- 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A +F R +HV+ +I+PAL +G+ ++C+R+ DS+ AYQG ++ + E + Sbjct: 57 -VVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEA 115 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD LD+ + L R+QN+ D E + + ++ R+ + +IAR + Sbjct: 116 IDGLWPDKIFYLDIEPHLALARLQNKEK-------DALEGQGLEFLQRVREGYEEIARTR 168 >gi|258545273|ref|ZP_05705507.1| dTMP kinase [Cardiobacterium hominis ATCC 15826] gi|258519486|gb|EEV88345.1| dTMP kinase [Cardiobacterium hominis ATCC 15826] Length = 205 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 55/165 (33%), Positives = 79/165 (47%), Gaps = 6/165 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ +G EG GK+T ++ ++ + REPGGTP E R +LL D Sbjct: 2 SGRFITLDGSEGVGKSTQLANIQAWCTAHGITARYGREPGGTPLGERLRAILLDRTTDA- 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR H++ I PAL G+ + DR+ D++YAYQ S L +L+ Sbjct: 61 DPLTELLLLLAARRAHLQQTILPALARGEWYISDRYRDATYAYQHYGRSIPLTTLSALET 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 S + PD +IL D R+ R A D FE +D Sbjct: 121 ASETDRDPDLALILGSSADTARDRLAQR-----GAAQDRFEAEDA 160 >gi|255513737|gb|EET90002.1| dTMP kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 215 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 107/218 (49%), Gaps = 21/218 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GK+T +L +L+ T EP P + + +++S A Sbjct: 1 MLIAFEGIDGSGKSTQAEMLDSYLKSSGIAAVTTAEPTSGPIGKLIKEIVVSK--KPINA 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++F A R H+E I P++ EGK+++ DR++ S+ AY G FL I+ Sbjct: 59 LAMQMLFTADRAYHLETTIMPSISEGKVIITDRYIGSTIAY-GTAAGIDKRFLVG---IN 114 Query: 125 VQEVMPDCTIILDLPVDIGLKR--------VQNRYSLRESACLDYFERKDVMIHEK---- 172 + + PD T ++D ++R ++N+ +L E + ++ + EK Sbjct: 115 RKFIPPDITFVIDANPRKAVERLNRRAAEFLKNKTALMEKDGELFKQKSTTTMFEKLGFL 174 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 R +L++ ++ + ++++ S S++ I+NI+ Sbjct: 175 GRARLAYLEMQKDFKN-YYVINGNRSKGSISKEIINIL 211 >gi|257387466|ref|YP_003177239.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286] gi|257169773|gb|ACV47532.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286] Length = 198 Score = 75.1 bits (183), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 100/212 (47%), Gaps = 21/212 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT L+R + D TREP + EA V S DE + Sbjct: 1 MLLTLEGLDGSGKTTAWETLQRHAAVPD-DAVFTREPTESWYGEA---VQRSIDDDEADS 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 AE ++ A DH+ N I PAL G++++ DR+ DS YAYQG S + D+L + Sbjct: 57 LAELFLYTADHADHLANTIEPALDAGRLVVSDRYSDSRYAYQGATLSDR--LDDALGYVR 114 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD TI LD+ + +R S + FE D + R+ + + Sbjct: 115 DVHAPWTRPPDATIYLDVDAETAAER---------SGATNKFETADYLA--DVRENYERL 163 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +D+ ++V I V EL+ Sbjct: 164 IAAEPERFVRIDATRPERAVRAAIEEAVDELL 195 >gi|71083690|ref|YP_266410.1| thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1062] gi|71062803|gb|AAZ21806.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1062] Length = 203 Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 3/100 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEGIEG GK+ HI + +L RK REPGG+ +E R+++L+ F E Sbjct: 7 IVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSANSEKIRNLILNNK-STFNKET 65 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 + +++ +AR +++E +IR + + KI+L DRF DS+ AYQ Sbjct: 66 DLLLYLSARSENIE-IIRKNVGK-KIILIDRFSDSTIAYQ 103 >gi|330507877|ref|YP_004384305.1| thymidylate kinase [Methanosaeta concilii GP-6] gi|328928685|gb|AEB68487.1| thymidylate kinase [Methanosaeta concilii GP-6] Length = 211 Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 67/225 (29%), Positives = 117/225 (52%), Gaps = 33/225 (14%) Query: 4 GLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SC 57 GL I+ EGI+G+GK+T I + LK + + + +T EP + A R +L S Sbjct: 3 GLLITLEGIDGSGKSTAIRHIAAKLKELVPERT--LLITAEPSNSAAGRILRSEILREST 60 Query: 58 GVDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G F E + +F A H+ + I P+L G I+LCDR+ DS+ AYQG + + + Sbjct: 61 GELSFAEHMEELFLFMADHARHLADTIIPSLEAGAIVLCDRYADSTAAYQGV--TLKGIV 118 Query: 117 LDSLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 D L + ++E+ PD T++ L + ++R+ +R S RE FER++ + Sbjct: 119 PDPL--VWIREIYRPWNLRPDRTLLFLLDPQLSVQRISSR-SGREK-----FERQEFL-- 168 Query: 171 EKRRQI---FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 RQ+ F +A +P+R I+D++ +VA + ++ + E++ Sbjct: 169 ---RQVDGNFRRLASLEPERFVIIDASLDEDAVAESAVSSILEML 210 >gi|325923095|ref|ZP_08184788.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865] gi|325546410|gb|EGD17571.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865] Length = 227 Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 72/222 (32%), Positives = 108/222 (48%), Gaps = 17/222 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARSLATTLEAAGAHVVLSKEPTNGPWGTKLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G+I++ DR+ S AYQG + L LD+L E Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGEIVILDRYFPSMVAYQG----AAGLPLDALLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++LDLP GL R++ R ++FE +D + E+ R IF + Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRAIFNTL-- 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 Q H+VD++ SV IV + +R+S ++ D Sbjct: 172 -QLPGKHVVDASADADSVLRQAHAIVVAALAERLSDDAAHTD 212 >gi|84489171|ref|YP_447403.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091] gi|121696579|sp|Q2NHE3|KTHY_METST RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|84372490|gb|ABC56760.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091] Length = 195 Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 16/187 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFG 63 ++I EGI+G GKTT LK +L+++ + V EP + + R LL + Sbjct: 1 MYIVLEGIDGVGKTTQTEKLKEWLEKRGFSVKTIVEPTDSDIGKIIREELLKPEATSDTN 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A++FAA RL + + + + KIL+ DR SS YQ +S + + + +I Sbjct: 61 QQMLALLFAADRLTLKDEINQVKNNQQKILISDRSFYSSITYQ----NSTTIEPEWIYKI 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TIILD+ D LKR +D FE K+ + EK R+ +L + + Sbjct: 117 NKHTPRPDLTIILDIDEDEALKRCDK---------IDTFENKEFL--EKTRENYLKLVKT 165 Query: 184 QPDRCHI 190 + + I Sbjct: 166 EKNIVKI 172 >gi|294626717|ref|ZP_06705312.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667167|ref|ZP_06732390.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598965|gb|EFF43107.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603066|gb|EFF46494.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 227 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 106/222 (47%), Gaps = 17/222 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLEAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG + L LD L E Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++LDLP GL R++ R ++FE +D + E+ R IF A Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 P + H+VD++ SV I+ + R+S ++ D Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212 >gi|289808796|ref|ZP_06539425.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289829610|ref|ZP_06547165.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 160 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 11/164 (6%) Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 S G + +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG Sbjct: 6 SVGDEVITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQT 65 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKR 173 L +L++ + + PD T+ LD+ ++GLKR + R L E D+F R Sbjct: 66 MLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGDLDRIEQESFDFFNRT-------- 117 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +L++A Q R +D+ +V +I V + VQ++ + Sbjct: 118 RARYLELA-AQDSRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 160 >gi|321472932|gb|EFX83901.1| hypothetical protein DAPPUDRAFT_315306 [Daphnia pulex] Length = 148 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 5/139 (3%) Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131 AAAR +H+ +++ PAL EGK +LCDRF DS++AYQG F+++L ++++ PD Sbjct: 2 AAARREHLRHLVWPALEEGKWVLCDRFSDSTFAYQGFGHELGVSFVETLNQLTMGNFQPD 61 Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 T I L + GL R + SL D +ER H + + +L + + RC + Sbjct: 62 LTFIFQLSEEAGLAR--KKESL---VSEDRYERFPEEFHRRVSKGYLALLEAESQRCVPL 116 Query: 192 DSAHSFQSVATNILNIVWE 210 + S + +A +I + E Sbjct: 117 SAHTSIEVIADHIWRTLAE 135 >gi|325928260|ref|ZP_08189463.1| thymidylate kinase [Xanthomonas perforans 91-118] gi|325541350|gb|EGD12889.1| thymidylate kinase [Xanthomonas perforans 91-118] Length = 226 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 17/215 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG + L LD L E Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++LDLP GL R++ R ++FE +D + E+ R IF A Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + P + H+VD++ SV I+ + R+S Sbjct: 172 DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205 >gi|78049663|ref|YP_365838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123583913|sp|Q3BN25|KTHY_XANC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78038093|emb|CAJ25838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 226 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 72/215 (33%), Positives = 103/215 (47%), Gaps = 17/215 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG + L LD L E Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++LDLP GL R++ R ++FE +D + E+ R IF A Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + P + H+VD++ SV I+ + R+S Sbjct: 172 DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205 >gi|300871563|ref|YP_003786436.1| thymidylate kinase [Brachyspira pilosicoli 95/1000] gi|300689264|gb|ADK31935.1| thymidylate kinase [Brachyspira pilosicoli 95/1000] Length = 203 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 17/188 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EGI+G+GK+T L L + N + T EP R +LS +D Sbjct: 3 GKLIVIEGIDGSGKSTIAKKLAETLNKNNIETIYTFEPTNAYYGAKLRDTMLSKDMD--- 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E +F R +H+ +I+P+L EGK ++ DR++ SS AYQG ++ + ++ ++ + Sbjct: 60 LDRELELFVDDRKEHIRLMIKPSLEEGKTVVLDRYMYSSIAYQG----AKGIDIEKIKNM 115 Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD I LPV+ L R+ + + +D FE ++ + +K IF + Sbjct: 116 HESFILIPDIVFIFHLPVEKSLNRI-----MEKRGFIDRFENEEYL--KKVDSIFS--SF 166 Query: 183 NQPDRCHI 190 N+P HI Sbjct: 167 NEPFIYHI 174 >gi|163755232|ref|ZP_02162352.1| thymidylate kinase [Kordia algicida OT-1] gi|161324652|gb|EDP95981.1| thymidylate kinase [Kordia algicida OT-1] Length = 206 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 14/167 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +FI+ EGI+G+GK+T + + L+ + + V++T EP + R +L G + Sbjct: 1 MKKNIFIAIEGIDGSGKSTQAKNIAKRLEAEGHKVYLTFEPTDMRIGKMIRSIL--GGQE 58 Query: 61 EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + A +F A RLDH+ N I L EG ++ DR+ SSYAY G H+ + Sbjct: 59 KADEKVIAALFVADRLDHILHETNGILKKLAEGYTVITDRYYFSSYAYHG-----AHMDM 113 Query: 118 DSL---QEISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLD 160 D + +++ + P I +D+ ++ +KR+ NR ++ LD Sbjct: 114 DWVIQSNKMAADILKPTVNIFVDVSPEVAMKRINANRETVEIYETLD 160 >gi|302519849|ref|ZP_07272191.1| thymidylate kinase [Streptomyces sp. SPB78] gi|302428744|gb|EFL00560.1| thymidylate kinase [Streptomyces sp. SPB78] Length = 216 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 9/136 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+ +G G GK+T ++ L L+ + VH T EP +P + R D Sbjct: 1 MTAGRFITLDGPGGVGKSTTVAALAGLLRDQGEHVHTTTEPSTSPLGQFTR-----GHAD 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A A + AA R DH+ IRP L G ++CDR+L S+ Q + LD Sbjct: 56 QISGHALACLVAADRYDHINTEIRPRLDAGDTVVCDRYLASTLVVQRLDGVPERFLLDLN 115 Query: 121 QEISVQEVMPDCTIIL 136 +I V+PD ++L Sbjct: 116 ADI----VLPDVAVLL 127 >gi|91763270|ref|ZP_01265234.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1002] gi|91717683|gb|EAS84334.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1002] Length = 203 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 3/100 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEGIEG GK+ HI + +L RK REPGG+ +E R+++L+ F E Sbjct: 7 IVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSRNSEKIRNLILNNK-STFNKET 65 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 + +++ +AR +++E +IR + + KI+L DRF DS+ AYQ Sbjct: 66 DLLLYLSARSENME-IIRKNVGK-KIILIDRFSDSTIAYQ 103 >gi|21244732|ref|NP_644314.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306] gi|23821767|sp|Q8PFG7|KTHY_XANAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21110424|gb|AAM38850.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306] Length = 227 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 17/222 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLAATLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG + L LD L E Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++LDLP GL R++ R ++FE +D + E+ R IF A Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIF--AAL 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 P + H+VD++ SV I+ + R+S ++ D Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212 >gi|289666405|ref|ZP_06487986.1| thymidylate kinase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669267|ref|ZP_06490342.1| thymidylate kinase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 227 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 17/222 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARCLATTLETAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G I++ DR+ S AYQG + L LD L E Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++LDLP GL R++ R ++FE +D + E+ R IF + Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIFAGL-- 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 P + H+VD++ SV I+ + R+S ++ D Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHAD 212 >gi|115377200|ref|ZP_01464412.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|310821205|ref|YP_003953563.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|115365783|gb|EAU64806.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|309394277|gb|ADO71736.1| Thymidylate kinase [Stigmatella aurantiaca DW4/3-1] Length = 220 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 10/138 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCG 58 G FI EG++GAG TT L L+ + + V TREP P R L L G Sbjct: 11 GRFIVLEGLDGAGTTTQAERLAAALRAEGHAVLTTREPSDGPIGTMIRQALTGRLVLPQG 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E A+++AA R DH++ + PAL G I+L DR++ SS AYQG L + Sbjct: 71 AGPLAPETLALLYAADRTDHLKAKVLPALEAGHIVLSDRYVLSSLAYQG-----AALAMA 125 Query: 119 SLQEISVQEVMPDCTIIL 136 ++ ++ V PD T+ + Sbjct: 126 WVEAVNGHAVSPDLTLFV 143 >gi|269986146|gb|EEZ92459.1| dTMP kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 200 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 23/184 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCG 58 G FI EGI+ AGK T LL ++ K + V +T+EP GG A + + LS Sbjct: 3 GKFIVIEGIDNAGKGTQSVLLAEHIRSKGFKVILTKEPTNGILGGISKAALNKELNLS-- 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +A ++F A R H+E I PA+ +G I++CDR+ S+ AY + ++ Sbjct: 61 -----NKALQLLFCADRAHHLETEIEPAMRDGFIVICDRYFFSTLAY----GFASNINYK 111 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ ++V PD I LDL L R + ++ L F+ + + K RQ +L Sbjct: 112 WLRSVNVSFRKPDLGIYLDLDPKTSLSRAK-----KQVDGLQLFDNLEKI--SKVRQAYL 164 Query: 179 DIAR 182 IA+ Sbjct: 165 SIAK 168 >gi|166713902|ref|ZP_02245109.1| thymidylate kinase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 227 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/222 (31%), Positives = 105/222 (47%), Gaps = 17/222 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLEAAGARFVLSKEPTNGPWGTKLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G I++ DR+ S AYQG + L LD L E Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD ++LDLP GL R++ R ++FE +D + E+ R IF + Sbjct: 121 LNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIFAGL-- 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 P + H+VD++ SV I+ + R+S + D Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGATAD 212 >gi|124486152|ref|YP_001030768.1| thymidylate kinase [Methanocorpusculum labreanum Z] gi|166221753|sp|A2ST45|KTHY_METLZ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|124363693|gb|ABN07501.1| thymidylate kinase [Methanocorpusculum labreanum Z] Length = 198 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 20/200 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGK+T LK LQ + + T+EPG +P +A + D F Sbjct: 1 MLITLEGIDGAGKSTLYEGLKTRLQ--DLEPVFTKEPG-SPLVNSAVRREIGANRDPF-- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AEA +F A H+ V+ PAL E K+++ DR+ DS +AYQ + S + D ++ Sbjct: 56 -AEATLFVADHAAHLAQVVLPALEEKKLVISDRYSDSRFAYQ--QVSLIGIVPDPKAWLT 112 Query: 125 V----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V PD TI+L + + + R L E ++FE D E+ ++ +L+ Sbjct: 113 AVHAGWSVRPDLTILLLISPETAMNR------LHERPGKEHFE--DPAFLEEVQKKYLER 164 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 P+R ++D+A +++ Sbjct: 165 VTEDPERFLLIDAAQEPETI 184 >gi|157165350|ref|YP_001466858.1| thymidylate kinase [Campylobacter concisus 13826] gi|166221732|sp|A7ZDK0|KTHY_CAMC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|112801334|gb|EAT98678.1| thymidylate kinase [Campylobacter concisus 13826] Length = 195 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 96/188 (51%), Gaps = 17/188 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+G GK+T I + L K D VT+EPGGT R +LL + + G Sbjct: 1 MYVLFEGIDGVGKSTQIEI----LASKFSDAIVTKEPGGTQLGVNLREILLRSSI-KIGK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS--QHLFLDSLQE 122 AE ++F A R +H E ++ P L GK++L DR S AY D + +++ L+ L + Sbjct: 56 RAEILLFLADRAEHFEKLVAPNL--GKLILSDRGFISGIAYALANDENLDENVLLE-LNK 112 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER-----KDVMIHEKRRQ 175 ++ + D I + ++ R++ R + E+ L+Y + K ++I Sbjct: 113 FALNDKFADKIIFFEASRELISSRLKARGTSDKIEARGLEYLLKVQSLMKQILIKNGFET 172 Query: 176 IFLDIARN 183 +F+D +++ Sbjct: 173 LFIDASKS 180 >gi|237752726|ref|ZP_04583206.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430] gi|229376215|gb|EEO26306.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430] Length = 193 Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 11/134 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L+I+ EGI+ AGK+T ++ LK + D T EPG TP + R +LL+ + Sbjct: 6 LYIALEGIDTAGKSTQVARLKEVFK----DAVFTFEPGATPLGKHIREILLNTEI--VSP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R +H +VI P L K++L DR L S AY + D L+S Sbjct: 60 KAEMLLFLADRAEHFASVIAPNL--DKLILSDRSLISGIAYARDFDME---MLESFNAFV 114 Query: 125 VQEVMPDCTIILDL 138 ++ ++P+ I+L+L Sbjct: 115 LENILPNKAILLEL 128 >gi|296242887|ref|YP_003650374.1| thymidylate kinase [Thermosphaera aggregans DSM 11486] gi|296095471|gb|ADG91422.1| thymidylate kinase [Thermosphaera aggregans DSM 11486] Length = 203 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 8/145 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G FI EGI+GAGKTT +L + K D T EP + +A + S D Sbjct: 5 NRGFFIVLEGIDGAGKTTLAKMLIDKFKSKGLDAIYTYEPTDSLIVKAVKGDY-SPYRD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +A+ FA RL HV+ +I P L +G ++ DR+ SS AYQ S+ + + Sbjct: 63 --AYIDALAFALDRLIHVKKLILPMLGKGVTVISDRYFYSSIAYQ----SAMGAPYEWVA 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 E++ + PD I LD+P ++ + R Sbjct: 117 EVNKYALRPDLAIYLDIPPEVAIDR 141 >gi|289192999|ref|YP_003458940.1| thymidylate kinase [Methanocaldococcus sp. FS406-22] gi|288939449|gb|ADC70204.1| thymidylate kinase [Methanocaldococcus sp. FS406-22] Length = 185 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 61/202 (30%), Positives = 104/202 (51%), Gaps = 25/202 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT LL L + T EP + R +L G + Sbjct: 1 MFIVFEGIDGSGKTTQSKLLAEKL-----NAFWTYEPSDSEIGRFIREIL--SGNVKVDN 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++FAA R++H + +I+ L + + ++CDR+L SS AYQ ++ F+ S+ + Sbjct: 54 KTLALLFAADRVEHTK-LIKEEL-KKRAVVCDRYLYSSIAYQSVAGVDEN-FIKSINRYA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD +L + ++ LKRV+ + D FE+KD + EK + +L++A + Sbjct: 111 LE---PDIVFLLVVDIETALKRVKTK---------DIFEKKDFL--EKVQNKYLELAE-E 155 Query: 185 PDRCHIVDSAHSFQSVATNILN 206 + I + S + V ILN Sbjct: 156 YNFIVIDTTKKSVKVVHEEILN 177 >gi|241889738|ref|ZP_04777036.1| thymidylate kinase [Gemella haemolysans ATCC 10379] gi|241863360|gb|EER67744.1| thymidylate kinase [Gemella haemolysans ATCC 10379] Length = 202 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 12/200 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I FEG++G+GKTT I+LL+ + +R VH TR+P + L G+ Sbjct: 1 MKKGLLIVFEGLDGSGKTTQINLLEEWFKRNKKLVHSTRQPTDFYRNDKRVKDYLEDGIV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A++ AA R E I+P L +G ++ DR+L SS A+ R + Sbjct: 61 P-NMYSIALLAAADRTYQNEVEIKPTLSKGINIISDRYLYSSLAFFKARGIKYQ----EI 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ PD I LD+ D L+RV+ +R+ L + E+ D + R FL++ Sbjct: 116 RNINKDIEEPDIIIFLDIDPDKALERVR----VRDGKNLRFEEKNDNTFIQVRNN-FLEV 170 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 + IVDS + + Sbjct: 171 L--PKGKTLIVDSTKDVKLI 188 >gi|254455554|ref|ZP_05068983.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211] gi|207082556|gb|EDZ59982.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211] Length = 204 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 11/188 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEGIEG+GK+ HIS++ ++L +K + REPGG P +E R ++L+ D F Sbjct: 7 IVFEGIEGSGKSHHISIVSKYLDKKKINYIKIREPGGNPNSEKIRKLILNNKSD-FNKNT 65 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + +++ AAR ++++ + KI+L DRF DS+ AYQ ++ + + + Sbjct: 66 DLLLYLAARSENIK--TIKKYYKKKIILIDRFTDSTIAYQHYGMGIDIKIINLIHKFLLD 123 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + T + L +N Y L++ L+ +++ ++ + K + FL +A + Sbjct: 124 NISVSFTF-------LNLVNKKNLYLRLKKRKKLNRYDKFNMNFYNKVQNGFLKLANLKK 176 Query: 186 DRCHIVDS 193 + H+V+S Sbjct: 177 NSYHLVNS 184 >gi|326792104|ref|YP_004309925.1| thymidylate kinase [Clostridium lentocellum DSM 5427] gi|326542868|gb|ADZ84727.1| thymidylate kinase [Clostridium lentocellum DSM 5427] Length = 203 Score = 71.6 bits (174), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 17/191 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F +F+G G GK+T I+ + LQ + +V T EP + R + + E Sbjct: 4 FFAFDGPNGVGKSTLINEVSNMLQERGIEVLNTSEPSTLEIGKFTRRI-----SEYVRKE 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + AA R +H+ VI+PAL E +I+LCDR++ SS QG + L+ + Sbjct: 59 TLACLVAADRYEHINKVIQPALDEKRIVLCDRYIASSLVLQGIDGVDEQFILNLCNNM-- 116 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSL----RESAC----LDYFERKDVMIHEKRRQIF 177 ++PD IL KR++ R +L RES ++YF+ ++ +++ Sbjct: 117 --ILPDIYFILIASPYTIRKRLKERENLTRFERESKIEYLEVEYFKNAVTILENMGIEVY 174 Query: 178 LDIARNQPDRC 188 N P+ C Sbjct: 175 EINTDNSPENC 185 >gi|21233354|ref|NP_639271.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770317|ref|YP_245079.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. 8004] gi|188993513|ref|YP_001905523.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. B100] gi|23821764|sp|Q8P3Y6|KTHY_XANCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|81303736|sp|Q4UPG4|KTHY_XANC8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621847|sp|B0RXV1|KTHY_XANCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21115188|gb|AAM43153.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575649|gb|AAY51059.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. 8004] gi|167735273|emb|CAP53487.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 227 Score = 71.6 bits (174), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 66/200 (33%), Positives = 100/200 (50%), Gaps = 21/200 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L++ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARSLATLLEQAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E + R +HVE +I PAL G+I++ DR+ S AYQG + L LD+L Sbjct: 65 SAQDEVDLLLRDRREHVEALIAPALARGEIVILDRYFPSMVAYQG----AAGLPLDAL-- 118 Query: 123 ISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + P D ++LDLP GL R++ R ++FE +D + E+ R IF Sbjct: 119 LAANDFAPRPDLLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRAIF--A 169 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 A P + H++D++ SV Sbjct: 170 ALQLPGK-HVIDASADADSV 188 >gi|322368399|ref|ZP_08042968.1| thymidylate kinase [Haladaptatus paucihalophilus DX253] gi|320552415|gb|EFW94060.1| thymidylate kinase [Haladaptatus paucihalophilus DX253] Length = 197 Score = 71.2 bits (173), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 36/214 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT + L + D TREP + EA V S D+ + Sbjct: 1 MLLTLEGLDGSGKTT----VWEVLHEEFPDAVFTREPTDSWYGEA---VNRSIEDDDADS 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A H+ + +RPAL EGK+++ DR+ DS YAYQ + LD + Sbjct: 54 VAELFLYTADHAAHLADTVRPALEEGKLVISDRYSDSRYAYQA-------VALDGVVSRP 106 Query: 125 VQEVM---------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH-EKRR 174 ++ ++ PDCTI LD+ + G R S + FE+ + + Sbjct: 107 MEYIIGVHKPWTRPPDCTIYLDVDPETGAAR---------SGATNKFEQAGFLAQVQSNY 157 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +D +P R VD+ S + V ++++ + Sbjct: 158 ERLMDA---EPGRFVRVDATQSPEDVIESVVSTI 188 >gi|166366993|ref|YP_001659266.1| thymidylate kinase [Microcystis aeruginosa NIES-843] gi|166089366|dbj|BAG04074.1| thymidylate kinase [Microcystis aeruginosa NIES-843] Length = 207 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 22/216 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----D 60 FI FEGI+G+G +T LL+ + ++ ++ EP R ++ + + + Sbjct: 5 FIVFEGIDGSGTSTQAKLLQEYFLKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIKDQN 64 Query: 61 EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +F + A +FAA R DH+ N V + E ++ R+ SS AY Sbjct: 65 QFDRQM-AYLFAADRHDHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNCNNPEE---- 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +++++ PD I +D+ DI L R++NR A + +E+++ ++ K RQ+ Sbjct: 120 LAFVRQLNQHFPNPDIVIYIDVLPDISLARIKNR------AITEVYEKQEKLM--KVRQM 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F+ I + D C +D + + +++ NI+N + L+ Sbjct: 172 FIQIFKEYKDNCLQLDGSDTIENLHRNIINYLERLI 207 >gi|289582282|ref|YP_003480748.1| thymidylate kinase [Natrialba magadii ATCC 43099] gi|289531835|gb|ADD06186.1| thymidylate kinase [Natrialba magadii ATCC 43099] Length = 199 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 21/207 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ EG++G+GKTT + LQ D TREP T + V S D+ + Sbjct: 4 LVTLEGLDGSGKTT----VWEALQDTYPDAVFTREP--TNDSWYGDAVYRSIEDDDADSL 57 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124 AE ++ A DH+ I PAL G +++ DR+ DS YAYQG + + L+ + Sbjct: 58 AELFLYTADHADHLSRKIEPALERGDLVISDRYADSRYAYQGATLAETGRIAEPLEYVVD 117 Query: 125 VQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V E + PD TI LDL + +R + +A L E R+ + +A Sbjct: 118 VHEPFSIEPDLTIYLDLDPETAARRAGSTNKFEHAAYL-----------ESVRENYDLLA 166 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 DR VD+ S +SV + +++ Sbjct: 167 ERYADRFVRVDATQSPESVLETVRSVL 193 >gi|55379836|ref|YP_137686.1| thymidylate kinase [Haloarcula marismortui ATCC 43049] gi|59798125|sp|Q5UXM3|KTHY_HALMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|55232561|gb|AAV47980.1| thymidylate kinase [Haloarcula marismortui ATCC 43049] Length = 195 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 16/170 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT L+ + V TREP T +A V S D+ + Sbjct: 1 MLVTLEGLDGSGKTTVWERLRSDDAVPSETV-FTREPTDTWYGDA---VQRSIDNDDADS 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A H+ +RPAL EG++++ DR+ DS YAYQG + F D L Sbjct: 57 LAELFLYTADHAAHLSETVRPALNEGRLVVSDRYSDSRYAYQGATLAGSGTFDDPLS--Y 114 Query: 125 VQEV------MPDCTIILDLPVDIGLKR--VQNRYSLRE--SACLDYFER 164 V+EV PD T+ LDL + +R N++ E + D +ER Sbjct: 115 VREVHAPWTRPPDRTVYLDLDPETAARRSGATNKFETAEYLTTVRDNYER 164 >gi|326392432|ref|ZP_08213833.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] gi|325991527|gb|EGD50118.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] Length = 92 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Query: 27 FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPA 86 +L ++ Y++ V REPGGT E R +LL + E +++A++R VE I PA Sbjct: 2 YLLKQGYNILVLREPGGTKVGEKVRDILLDKN-NFISPVTETLLYASSRAQLVEEKILPA 60 Query: 87 LMEGKILLCDRFLDSSYAYQG 107 L +G+I++ DRF+DSSY YQG Sbjct: 61 LEKGQIVILDRFVDSSYVYQG 81 >gi|325914525|ref|ZP_08176869.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937] gi|325539295|gb|EGD10947.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937] Length = 226 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 17/215 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V ++EP R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARNLATTLEAAGARVKSSKEPTNGHWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HVE +I PAL G+I++ DR+ S AYQG + L LD+L E Sbjct: 65 SADEEAELLIRDRHEHVETLIAPALARGEIVILDRYFPSMVAYQG----AAGLPLDALLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++LDLP GL R++ R ++FE +D + E+ R IF A Sbjct: 121 RNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRAIF--NAL 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P + ++D++ SV L IV + +R+S Sbjct: 172 QLPGK-QVLDASADADSVLRQALTIVIAALAERLS 205 >gi|300710360|ref|YP_003736174.1| thymidylate kinase [Halalkalicoccus jeotgali B3] gi|299124043|gb|ADJ14382.1| thymidylate kinase [Halalkalicoccus jeotgali B3] Length = 192 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 26/213 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GK+T + LQ D TREP + EA + D Sbjct: 1 MLLTLEGLDGSGKST----VHEALQDTYPDAVFTREPTDSWYGEAVARSISDAEADPL-- 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 AE ++ A DH+ V+RPAL GK+++ DR+ DS YAYQG ++ +D E Sbjct: 55 -AELFLYTADHADHLSRVVRPALDAGKLVISDRYSDSRYAYQG---AALAGAIDRPMEYV 110 Query: 124 ----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 S PD TI LD+ + G +R S + FE+ + + + R + Sbjct: 111 RGVHSPFTRSPDLTIYLDVDPETGARR---------SGASNKFEQSEYL--GRVRANYER 159 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +P R +D+ S ++V + ++ E++ Sbjct: 160 LIDAEPGRFVRIDATRSPETVLDRVEGVLSEVL 192 >gi|110669030|ref|YP_658841.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790] gi|109626777|emb|CAJ53245.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790] Length = 213 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 25/217 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ EG++G+GK+T L+ L +V TREP + + + D Sbjct: 14 LITLEGLDGSGKSTVCESLQSALP----EVTFTREPTDSWYGDLVTESMHDDSADSL--- 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQEI 123 AE +F A H+ VIRP+L G ++ DR+ DS +AYQ DS L+ +Q Sbjct: 67 AELFLFTADHAAHLNRVIRPSLASGTAVISDRYADSRFAYQAAALADSRIDAPLEYIQ-- 124 Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S+ E PD T+ LD+ + G+ R + + FER V E+ + + Sbjct: 125 SIHEPFSRRPDATVYLDIDPETGVTR---------AGATNKFER--VQYLERVATQYERV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P R + VD++ S V + IV ++ VS Sbjct: 174 IAAEPTRFYRVDASQSIADVKKRVKTIVGTMLGDEVS 210 >gi|254168531|ref|ZP_04875375.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|197622586|gb|EDY35157.1| thymidylate kinase [Aciduliprofundum boonei T469] Length = 197 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 104/208 (50%), Gaps = 19/208 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GK+T + L + + +T EP T + R + +E Sbjct: 1 MFIVFEGIDGSGKSTIAKRIAEHLSSLGHKIFLTEEPTTTWMGKDVRRAI----EEEKNP 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 ++A++F A R +HVE I+ L +GKI++ DR++ S++AYQG + +L+ + Sbjct: 57 LSQALLFFADRAEHVE-AIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115 Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V E M PD I+L + GL V R +E FER++ + E+ + I++ + Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR-DFKEK-----FEREEFL--ERVQDIYMAL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +VDS + V ++ I+ Sbjct: 168 ADKYG--FFVVDSNRNLNEVYDDVRKII 193 >gi|325971230|ref|YP_004247421.1| thymidylate kinase [Spirochaeta sp. Buddy] gi|324026468|gb|ADY13227.1| Thymidylate kinase [Spirochaeta sp. Buddy] Length = 203 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 20/178 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEG++GAG TT + LL R + T EP P R VL + Sbjct: 8 FIVFEGLDGAGTTTQMQLLAEACDRADTPCRATFEPTDKPIGRLVRSVLQKQILT--TPL 65 Query: 66 AEAIVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQ 121 A A+++AA R DH+ N + L GK+++ DR+L SS +YQG E D + + SL Sbjct: 66 ALAMLYAADREDHLNNPVYGIIHDLEAGKLVISDRYLYSSLSYQGVECDFEK---IASLN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRRQIF 177 E P +D PVD L+R+ +R ++ FE+K+ + + E +IF Sbjct: 123 EFP----SPQYVFFIDTPVDECLRRINSR-----GNEVELFEKKEFLHKVKENYERIF 171 >gi|262199023|ref|YP_003270232.1| thymidylate kinase [Haliangium ochraceum DSM 14365] gi|262082370|gb|ACY18339.1| thymidylate kinase [Haliangium ochraceum DSM 14365] Length = 210 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 33/216 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--GVDE 61 GL I EGI+G+G +T LL + H T EP P R +L VD+ Sbjct: 6 GLLIVLEGIDGSGTSTQTRLLCDAFAARGRSTHATHEPSTGPVGLLLREMLAGAHAPVDQ 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++++AA R DHV+ + PAL GK+++ DR+ SS AYQG + D + Sbjct: 66 ---TTLSLLYAADRADHVQREVEPALAAGKLVVSDRWYHSSLAYQGAGGTR-----DWVA 117 Query: 122 EISVQEVMPDCTIILDLPV---------DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 ++ PD TI L++ D + + +R +++ DY E Sbjct: 118 ALNRYARAPDLTIFLEVAAEIAARRRADDGRSEEIFDRLEIQQRVAADYRE--------- 168 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +D R + +R ++D +V+ +I+ +V Sbjct: 169 ----VIDSLRGR-ERIEVLDGERPLAAVSADIVRLV 199 >gi|268679911|ref|YP_003304342.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946] gi|268617942|gb|ACZ12307.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946] Length = 194 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 20/204 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEG++ +GK+T +SL + ++ VH T+EPGGTP R +LL G + Sbjct: 1 MYVIFEGVDTSGKSTQVSLFAK----RHPHVHATKEPGGTPTGSKLREMLLG-GELKGSF 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123 AE +F A R H + V++P L KI++ DR S AY S FL + + Sbjct: 56 NAELFLFLADRAFHYDTVVKP-LRHEKIVMSDRGFLSGIAYACANHSDIDGTFLLQMNRL 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIFLDI 180 +++E P+ ++ V N + ++E + D E + V + + I + Sbjct: 115 ALEEDYPEKMVLF----------VSNEHLIKERLGMKEHDAIEERGVSYLLQIQDIMRRV 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 A+ P + VD+A +++ I Sbjct: 165 AKTLPIKVLEVDAAQDIETLYRQI 188 >gi|322378354|ref|ZP_08052810.1| thymidylate kinase [Helicobacter suis HS1] gi|322380924|ref|ZP_08054995.1| thymidylate kinase [Helicobacter suis HS5] gi|321146647|gb|EFX41476.1| thymidylate kinase [Helicobacter suis HS5] gi|321149211|gb|EFX43655.1| thymidylate kinase [Helicobacter suis HS1] Length = 206 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 20/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+ +GK+T I+LLK+ + T+EPGGTP +A R +L + + Sbjct: 8 MFIAIEGIDTSGKSTQINLLKQTFPNALF----TKEPGGTPLGQALREKILD---HKLSS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123 A+ ++F A R H+E VI+P +++ DR L S AY LQE I Sbjct: 61 HAQFLLFLADRSLHIEEVIKPN--SHRLIFSDRSLISGLAYAPCL----------LQEAI 108 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ +I DL + L + + L + +D E + V E ++ L+ + Sbjct: 109 DLHKIHGLLEVIPDLVFVLKLDHTELKKRLDKKTSMDCIEAQGVAFLEHTQKRLLEACQI 168 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +I+D++ S S+ +IL + L+ Sbjct: 169 LKLKTYILDASKSPSSIHQSILEKLESLL 197 >gi|153004942|ref|YP_001379267.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] gi|152028515|gb|ABS26283.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] Length = 214 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 72/148 (48%), Gaps = 9/148 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----SCG 58 G FI EG++GAG TT LL L+ VHVT EP G P R VL G Sbjct: 9 GRFIVLEGLDGAGTTTQARLLGDRLRASGRSVHVTAEPSGGPVGSLVRQVLSRRVVGGRG 68 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E A A A++FAA RLDHV I P L G ++ DRF SS AYQG L Sbjct: 69 EGELDAGALALLFAADRLDHVAAEIAPKLAGGVDVVSDRFTLSSLAYQGLTTGD----LP 124 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 ++ I+ + PD T+ L + LKR Sbjct: 125 WVEAINGRAATPDVTLFLRARPSVALKR 152 >gi|145299023|ref|YP_001141864.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851795|gb|ABO90116.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449] Length = 206 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 7/162 (4%) Query: 43 GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102 G P AE R ++ + EAE ++ A+R+ VE I+PAL EG+ ++ DR SS Sbjct: 35 GNPLAERMRAIVKEVHDERLTIEAELLLMYASRVQLVETRIKPALAEGRWVVGDRHDLSS 94 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 AYQG + ++++ + + PD T+ LD+ +GL+R ++R LD Sbjct: 95 QAYQGGGRGIDAGLIGAIKQAVLGDFKPDFTLYLDIDPALGLQRARHR------GELDRI 148 Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 E + + E+ R +L++A + D ++D+ + V T I Sbjct: 149 ELEQLSFFERTRSRYLELA-AKDDSIRVIDAGQTPDQVKTAI 189 >gi|320100889|ref|YP_004176481.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162] gi|319753241|gb|ADV64999.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162] Length = 204 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 8/145 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG++GAGKTT L L+ + + T EP + +A + S D Sbjct: 3 GKGYFIVLEGLDGAGKTTVAHRLVEELESRGFPAIYTYEPTDSEIVKAVK----SIYSDL 58 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +A+ FA RL HV+++++P + +G ++ DR+ SS AYQ S+ D + Sbjct: 59 RDAYIDALAFALDRLIHVKSLVKPFIEKGVTVVSDRYFYSSVAYQ----SASGAPFDWIL 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 E++ + PD I LD+ + GL R Sbjct: 115 EVNKYALKPDVAIYLDVDPEEGLSR 139 >gi|150400777|ref|YP_001324543.1| dTMP kinase [Methanococcus aeolicus Nankai-3] gi|166221752|sp|A6UTV9|KTHY_META3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|150013480|gb|ABR55931.1| dTMP kinase [Methanococcus aeolicus Nankai-3] Length = 196 Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 54/163 (33%), Positives = 85/163 (52%), Gaps = 20/163 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G+GKTT LL +L T EP + R VL G E Sbjct: 4 FIVFEGIDGSGKTTQAKLLADYLNG-----IYTCEPTNGEIGQLIRKVL---GGKNCEKE 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A++FA R++H++ I L+E +++CDR++ SS YQ S Q + +D + I+ Sbjct: 56 SLALLFAGDRVEHIKE-IEHKLIEN-MVICDRYVYSSMVYQ----SIQGIDIDFIASINR 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +PD I LD+ ++ LKR+ +R S + FE K+++ Sbjct: 110 FAKIPDVLIYLDVSIEESLKRMGDRDS------KEIFENKEIL 146 >gi|292656335|ref|YP_003536232.1| thymidylate kinase [Haloferax volcanii DS2] gi|291370107|gb|ADE02334.1| thymidylate kinase [Haloferax volcanii DS2] Length = 197 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 13/196 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63 + ++ EG++G+GKTT + L D TREP + EA + G D Sbjct: 1 MLVTLEGLDGSGKTT----VWEALHDAYPDAVFTREPTSDSWYGEAVNRAIDDDGADPL- 55 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQ 121 A +F A DH+ V+RPAL +GK+++ DR+ DS YAYQ RDS ++ ++ Sbjct: 56 --ATLFLFTADHADHLSRVVRPALADGKLVVSDRYSDSRYAYQAAALRDSDLRRPMEYIR 113 Query: 122 EISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIH-EKRRQIFL 178 I PD TI LD+ + R ++A L D E + ++ E R + + Sbjct: 114 GIHTAFTRPPDKTIYLDVDPETAAARSGATNKFEQAAYLADVRENYERLVEAEPERFVRI 173 Query: 179 DIARNQPDRCHIVDSA 194 D ++ D V++A Sbjct: 174 DATQSPEDVLDAVEAA 189 >gi|39938830|ref|NP_950596.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|39721939|dbj|BAD04429.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 204 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 48/168 (28%), Positives = 91/168 (54%), Gaps = 17/168 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKTT I +++ L+++ ++V + G + + R + L+ A+ Sbjct: 3 LIVFEGLDGSGKTTLIQKIRKQLEKQGHEVITLQGLGSSSIGQPLRDIFLT------NAQ 56 Query: 66 AEAI---VFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120 + + + + A + + E I+P L KI+L DR+L S++AYQ R+ ++ L +L Sbjct: 57 LKPLTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNYQLFNL 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYFER 164 ++ Q + PD T+ L + +GL+R QN + + E+ L YF + Sbjct: 117 --LNKQFIKPDMTVYLKIKPQLGLERKQNQKDHKLDVIETHPLSYFRQ 162 >gi|302349154|ref|YP_003816792.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15] gi|302329566|gb|ADL19761.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15] Length = 214 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 14/168 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G ++ EGI+G+G TTH LL + L Y T+EP P + R LL+ G E Sbjct: 3 GAIVALEGIDGSGITTHSKLLAQRLSSMGYRAIYTKEPTEGPVGQVIRQ-LLAQGRPE-- 59 Query: 64 AEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A++FAA R H + + AL +G +++ DR+ SS AYQG + Sbjct: 60 PRLAALLFAADRSWHLCCDPSLPGGVMGALEQGYVVVMDRYKYSSIAYQGASGADPGW-- 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 L E++ D I +D+PV++ L RV R RE ++ F R+ Sbjct: 118 --LWEVNSFAPEADLLIFIDVPVEVALSRVAERQR-REGYEVEGFLRR 162 >gi|8247943|sp|Q55593|KTHY_SYNY3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 212 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 17/219 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGV 59 + LFI EGI+G+GKTT LL QR+ ++ EP P R L L Sbjct: 2 AALFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYN 61 Query: 60 DEFGAEAE-AIVFAAAR---LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 D EA+ +FAA R L H + + L + ++ R+ SS AY ++ Sbjct: 62 DARQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCHTEAD--- 118 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--HEKR 173 + +Q ++ PD I LDLPVD+ L+R+ +R L + A + +E+++ +I H Sbjct: 119 -WEFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLISVHRNY 177 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +IF A Q C + D++ + + I+ V E++ Sbjct: 178 DRIF---AHYQGQLCRL-DASLPVEQLHQAIITKVEEML 212 >gi|257076424|ref|ZP_05570785.1| thymidylate kinase [Ferroplasma acidarmanus fer1] Length = 206 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 24/152 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G+GKTT ++ L++ ++H TREP T + A LS + F Sbjct: 1 MFITIEGIDGSGKTTLVNSLRKIFD----NIHFTREP--TDKFQLANLKTLSTPFNSF-- 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS---- 119 +F RL+H + + G K ++CDR+L SS AY+G + LF D Sbjct: 53 -YNFFLFTYDRLEHQDEI------NGFKNVICDRYLASSIAYEGP--MIEELFGDKKETV 103 Query: 120 --LQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 + E+S +PD I LD +D+ L+R++N Sbjct: 104 LWMLEVSKMLKLPDMIIYLDAHLDVALERIRN 135 >gi|152990566|ref|YP_001356288.1| thymidylate kinase [Nitratiruptor sp. SB155-2] gi|151422427|dbj|BAF69931.1| thymidylate kinase [Nitratiruptor sp. SB155-2] Length = 191 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 15/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I EGI+ AGK+T I LK D T+EPG TP R ++L + Sbjct: 1 MYILIEGIDRAGKSTQIEKLKTLFP----DALFTKEPGCTPLGNKIRDMVLHT--QNPSS 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI P L K ++ DR S AY + L +L I+ Sbjct: 55 LAELFLFLADRAEHIEKVILPNL--KKTIISDRGYISGIAYAAIKTELDLPTLRNLNAIA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ V PD + L+L + KR+ ++ LD E++ + + + I + +++ Sbjct: 113 MKNVYPDKIVFLELSENELRKRM-------DALPLDSIEQRGIEYLMQVQSIMKKVIQSE 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P I+D++ + + IL + E Sbjct: 166 PIPSLILDASLDEEVIFQTILTFIKE 191 >gi|16331301|ref|NP_442029.1| hypothetical protein slr0379 [Synechocystis sp. PCC 6803] gi|1001473|dbj|BAA10099.1| slr0379 [Synechocystis sp. PCC 6803] Length = 236 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/219 (28%), Positives = 103/219 (47%), Gaps = 17/219 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGV 59 + LFI EGI+G+GKTT LL QR+ ++ EP P R L L Sbjct: 26 AALFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYN 85 Query: 60 DEFGAEAE-AIVFAAAR---LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 D EA+ +FAA R L H + + L + ++ R+ SS AY ++ Sbjct: 86 DARQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCHTEAD--- 142 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--HEKR 173 + +Q ++ PD I LDLPVD+ L+R+ +R L + A + +E+++ +I H Sbjct: 143 -WEFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLISVHRNY 201 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +IF A Q C + D++ + + I+ V E++ Sbjct: 202 DRIF---AHYQGQLCRL-DASLPVEQLHQAIITKVEEML 236 >gi|154148244|ref|YP_001406485.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381] gi|166221733|sp|A7I1U4|KTHY_CAMHC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|153804253|gb|ABS51260.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381] Length = 195 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 8/148 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I FEGI+G GK+T I LLK + KNY +T+EPGGT E R +LL + Sbjct: 1 MLIFFEGIDGVGKSTQIELLKS-VYNKNY--LITKEPGGTLLGEKLREILLESDF-KISK 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEI 123 AE +F A R +H E V++ + + K ++CDR S AY + + + L +L +I Sbjct: 57 TAELFLFLADRAEHFEKVLKFS--DKKDIICDRSFVSGIAYALANEQNLDINDLINLNKI 114 Query: 124 SVQEVMPDCT-IILDLPVDIGLKRVQNR 150 ++ +P+ I L + D R++NR Sbjct: 115 ALGGKIPNAKFIFLKISKDNLRFRLENR 142 >gi|78777324|ref|YP_393639.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251] gi|123550247|sp|Q30RH7|KTHY_SULDN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78497864|gb|ABB44404.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251] Length = 191 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I+ LQ D +T+EPGGT A + R ++L+ + Sbjct: 1 MYIAIEGIDTAGKSTQIA----KLQEHFSDAIITKEPGGTEAGKEIREIVLNAKIK--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSLQ 121 +AE ++F A R +H++ VI P L K+++ DR + S AY QGE + L L+ Sbjct: 55 KAEFLLFLADRAEHIQEVIEPNL--SKMIISDRSVVSGVAYALVQGEISETAILHLNRF- 111 Query: 122 EISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLD 179 + + P +L L ++ L+ Q + E ++Y + +D +I L+ Sbjct: 112 --ATGGIYPQKIFLLQLTNEELSLRLSQKKLDGIELRGIEYLLKIQDALIKASN---LLN 166 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILN 206 I ++D+ + S+ ILN Sbjct: 167 I------ELVLIDATKNIDSITQEILN 187 >gi|256810617|ref|YP_003127986.1| thymidylate kinase [Methanocaldococcus fervens AG86] gi|256793817|gb|ACV24486.1| thymidylate kinase [Methanocaldococcus fervens AG86] Length = 186 Score = 68.2 bits (165), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/177 (28%), Positives = 93/177 (52%), Gaps = 24/177 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT LL ++ T EP + + R +L G + Sbjct: 1 MFIVFEGIDGSGKTTQSKLLAEKIK-----AFWTYEPSNSDVGKFIREIL--SGNIKVDD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++FAA R++H + + + ++CDR+L SS AYQ + F++S+ + + Sbjct: 54 KTLALLFAADRVEHTKLIKEKLKEKD--VVCDRYLYSSIAYQSVAGVDED-FINSINKYA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD +L + +++ LKRV+ + D FE+KD ++ K + +L++A Sbjct: 111 LK---PDIVFLLIVDIEVALKRVKTK---------DIFEKKDFLM--KVQDKYLELA 153 >gi|320531334|ref|ZP_08032307.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136462|gb|EFW28437.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 109 Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFISFEG +G GKTT I +L L + D +TREPGGT R +LL G Sbjct: 26 GPGLFISFEGGDGVGKTTQIRILADLLAAADVDHILTREPGGTELGVEIRRLLLHGG--H 83 Query: 62 FGAEAEAIVFAAARLDHVENVIRPAL 87 AEA+++AA R H+ +RPAL Sbjct: 84 VAPRAEALLYAADRAHHIATRVRPAL 109 >gi|194246795|ref|YP_002004434.1| Thymidylate kinase [Candidatus Phytoplasma mali] gi|193807152|emb|CAP18590.1| Thymidylate kinase [Candidatus Phytoplasma mali] Length = 205 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 20/215 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 L I FEGI+G GKTT I+ L + L+ + N V + G T + R + L + Sbjct: 2 LLIVFEGIDGTGKTTLINNLAQTLKTIQPNSKVIIINGLGSTNIGTSIREMFLFN--PKM 59 Query: 63 GAEAEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLD 118 +E + + A L ++N +I+P L I+L DR+L S++AYQ + D +F Sbjct: 60 ISETRYFL-SFANLIQIQNELIKPHLKTNTIILMDRYLGSNFAYQAYPFQIDPHYSIF-- 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 Q I + + P T+++DL I LKR + L E+ L YF++ K Q+F Sbjct: 117 --QLIQKKFLKPQITVLIDLEPKIALKRKGDLIDLIENQPLSYFQQV-----VKGYQLFF 169 Query: 179 D--IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + + + + ++S Q+V N L+++ L Sbjct: 170 NHYLKTDYKIKLNGLNSTLQHQTVIFNYLDLIKSL 204 >gi|39939174|ref|NP_950940.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|39722283|dbj|BAD04773.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 209 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 11/163 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT I +K L+++ +V V R G + E+ R L+ ++ Sbjct: 3 LIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLTH--NKLHNL 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQEI 123 + A + E +I+P L KI+L DR+L S++AY+ R ++ F ++L ++ Sbjct: 61 TRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKYYFFNNLTKL 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYS----LRESACLDYF 162 ++ P+ T+ L + GL R N+ + + E++ L YF Sbjct: 121 FIK---PNLTVYLKIDPQTGLNRKANQTNHTLDVIETSPLSYF 160 >gi|261885334|ref|ZP_06009373.1| thymidylate kinase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 193 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++FEG++G GK+T ISLLK F D +T+EPGGT R LL + Sbjct: 1 MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + E +F A R +H E V++P ++L DR S AY DSS Sbjct: 56 KTEIFLFLADRAEHYEKVLKPNY--ANLVLNDRSFVSGMAYAMANDSS 101 >gi|118474238|ref|YP_892065.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40] gi|254808284|sp|A0RPD2|KTHY_CAMFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118413464|gb|ABK81884.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40] Length = 192 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++FEG++G GK+T ISLLK F D +T+EPGGT R LL + Sbjct: 1 MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + E +F A R +H E V++P ++L DR S AY DSS Sbjct: 56 KTEIFLFLADRAEHYEKVLKPNY--ANLVLNDRSFVSGMAYAMANDSS 101 >gi|58580054|ref|YP_199070.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622050|ref|YP_449422.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578974|ref|YP_001915903.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A] gi|73920833|sp|Q5H5T5|KTHY_XANOR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123523407|sp|Q2P8H9|KTHY_XANOM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621848|sp|B2SS96|KTHY_XANOP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58424648|gb|AAW73685.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365990|dbj|BAE67148.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523426|gb|ACD61371.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 227 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 17/222 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLTTTLEAAGARVVLSKEPTNGPWGTKLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G I++ DR+ S AYQG + L LD L E Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQG----AAGLPLDELLE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD ++LDLP GL R++ R ++FE +D + E+ R IF + Sbjct: 121 LNAFAPRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--ERCRTIFAGL-- 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 P + H+VD++ SV I+ + R+S + D Sbjct: 172 ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGAPAD 212 >gi|307353971|ref|YP_003895022.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] gi|307157204|gb|ADN36584.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] Length = 210 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 85/167 (50%), Gaps = 17/167 (10%) Query: 1 MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 MN+ GLFI+ +G G GK+T + L + L + ++ + TREP + + R Sbjct: 1 MNTSYGLFITLDGPNGVGKSTIMGDLCKKLTSQGFETYKTREPTDSLIGDFLRK-----S 55 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ + A + A R H+E+ I PAL + KI+L DR+++SS Q D L+ Sbjct: 56 EEKYRGKTLACIAATDRYYHIEHEILPALQKKKIVLSDRYVESSLVLQRIDDVD----LE 111 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + EI+ ++PD ++IL D + R +LR +FERK Sbjct: 112 FIWEINKNVIIPDLSVILLASPDT----LNKRLNLRSDGS--FFERK 152 >gi|85057562|ref|YP_456478.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789667|gb|ABC65399.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 209 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 11/163 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT I +K L+++ +V V R G + E+ R L+ ++ Sbjct: 3 LIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLTH--NKLHNL 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQEI 123 + A + E +I+P L KI+L DR+L S++AY+ R ++ F ++L ++ Sbjct: 61 TRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKYYFFNNLTKL 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYS----LRESACLDYF 162 ++ P+ T+ L + GL R N+ + + E++ L YF Sbjct: 121 FIK---PNLTVYLKIDPQTGLNRKANQTNHTLDVIETSPLSYF 160 >gi|290558929|gb|EFD92316.1| dTMP kinase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 205 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 16/150 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSC 57 +G FI EGI+ AGK T +LL + L+ V +T+EP GG A + + +S Sbjct: 2 NGKFIVIEGIDNAGKGTQSTLLTQHLRENGLKVVLTKEPTNGILGGLSKAALNKEINIS- 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A ++F A R H+E I P + +G ++CDR+ S+ AY G + +L Sbjct: 61 ------GRALQLLFCADRAHHIETEIEPMMSKGLTVICDRYFFSTLAY-GFVSGINYKWL 113 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRV 147 S +++ PD I LDL + L R+ Sbjct: 114 RS---VNINFRKPDLGIYLDLDPKVSLSRM 140 >gi|261403129|ref|YP_003247353.1| thymidylate kinase [Methanocaldococcus vulcanius M7] gi|261370122|gb|ACX72871.1| thymidylate kinase [Methanocaldococcus vulcanius M7] Length = 187 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 24/180 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT L K+ + T EP + E R +L G + Sbjct: 1 MFIVFEGIDGSGKTTISKKLA-----KSINAFWTYEPSNSVVGELIRKIL--SGNVKVDD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++F+A R++H + + + + ++CDR+L SS AYQ + D ++ I+ Sbjct: 54 KTLALLFSADRIEHNKKIKEE--LRYRDVVCDRYLYSSIAYQSVAGVDE----DFIRSIN 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +L ++ LKR+ + D FE+K+ + EK ++ +LD+A+ + Sbjct: 108 RYALKPDLVFLLICDIETALKRINTK---------DIFEKKEFL--EKVQEKYLDLAKKE 156 >gi|154174807|ref|YP_001408262.1| thymidylate kinase [Campylobacter curvus 525.92] gi|254808283|sp|A7GYH0|KTHY_CAMC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|112802787|gb|EAU00131.1| thymidylate kinase [Campylobacter curvus 525.92] Length = 194 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 7/108 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEG++G GK+T I + + R + D VT+EPGGT + R +LL G + A Sbjct: 1 MYVLFEGVDGVGKSTQIEM----IARAHEDSLVTKEPGGTKIGQKLREILLG-GDFKLSA 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 AE ++F A R +H + +I+P +++L DR S AY D+S Sbjct: 56 RAEILLFLADRAEHYQKMIKPN--SSRLILSDRGFVSGVAYALANDAS 101 >gi|313682360|ref|YP_004060098.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994] gi|313155220|gb|ADR33898.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994] Length = 193 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 9/159 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I L+ D +T+EPGGT R+++L + Sbjct: 1 MYIAIEGIDTAGKSTQIEALRSLFP----DALITKEPGGTTVGTEIRNMVLHGNLKS--K 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H E+VI P + K+++ DR S AY ++ L L ++ Sbjct: 55 TAELLLFLADRAEHTESVILPNM--NKLIISDRSAVSGMAYASVQNLCDEPVLVMLNRLA 112 Query: 125 VQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYF 162 +PD IL L ++ + Q + + ES +Y Sbjct: 113 TGGTLPDTVFILKLTSEELSYRLSQKEHDVIESRGTEYL 151 >gi|85057461|ref|YP_456377.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789566|gb|ABC65298.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 210 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 13/166 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT+ I +++ LQ++ +V V R G + + R L+ + Sbjct: 3 LIIFEGLDGSGKTSLIKSVQQELQKQGNEVVVIRGLGSSTIGNSIRETFLTH--NNLHNL 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQE 122 + A + E I+ L KI+L DR+L S++AY+ + D + H+F Sbjct: 61 TRYFLSFANMIQTQEECIKHQLKTNKIILVDRWLGSNFAYRVYPSKIDKNYHIF----NN 116 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR----ESACLDYFER 164 +S + + PD TI L + +GL+R N+ + + E++ L YF++ Sbjct: 117 LSKKFIKPDITIYLKIHPQLGLERKINQKNHQLDVIETSSLTYFQQ 162 >gi|13541004|ref|NP_110692.1| thymidylate kinase [Thermoplasma volcanium GSS1] gi|23821802|sp|Q97CC8|KTHY_THEVO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|14324388|dbj|BAB59316.1| thymidylate kinase [Thermoplasma volcanium GSS1] Length = 190 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 29/170 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+GAGKTT L L+++ + V +TREP V L Sbjct: 1 MFIAVEGIDGAGKTTLAKSLSSLLEKEGFRVFLTREPTDDIRNYEGDDVEL--------- 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--------GERDSSQHLF 116 I F R H + IR L EG +++ DR++ SSYAY+ G + ++ + Sbjct: 52 ---FIKFTLDRYKH-QKEIRKKLNEGFVVISDRYIRSSYAYEMKGAAAALGSEEKAKE-W 106 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 +D + I + PD I++ + V +GL R+ R + + +FE+++ Sbjct: 107 MDCVSNIIT--IRPDINILVQVDVQVGLDRISKR-----NGTITHFEQRE 149 >gi|222480299|ref|YP_002566536.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239] gi|254808298|sp|B9LQ28|KTHY_HALLT RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|222453201|gb|ACM57466.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239] Length = 197 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 23/213 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EG++G+GKTT L D TREP + EA V S D+ Sbjct: 1 MLITLEGLDGSGKTTVWEALHDVYP----DATFTREPTDSWYGEA---VDRSIAADDADP 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 AE + A DH+ I PAL +G +++ DR+ DS +AYQ ++ + +D E Sbjct: 54 LAELFLLTADHADHLSGTIEPALADGDLVISDRYSDSRFAYQAATLAASDVDIDRPLEYI 113 Query: 124 ----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD TI LDL R + + + FE+ + R+ + Sbjct: 114 KGIHAAFSRPPDATIYLDL---------DAREAAERAGRTNKFEQDGYLA--AVRKNYER 162 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +PDR +D++ S ++V + ++ EL+ Sbjct: 163 LIDAEPDRFVRIDASQSPEAVIARVEEVLSELL 195 >gi|291276513|ref|YP_003516285.1| putative thymidylate kinase [Helicobacter mustelae 12198] gi|290963707|emb|CBG39540.1| putative thymidylate kinase [Helicobacter mustelae 12198] Length = 193 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+ +GKTT I LLK + TREPGG+ E R ++L + Sbjct: 1 MYIVFEGIDTSGKTTQIELLKPLFPHAIF----TREPGGSRIGEKIRKMILEQ--EGLNP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122 AE +F A R H+ VI P + +++ DR S AY ++ LF ++ L Sbjct: 55 TAEFFLFLADRAQHISEVILPH--KKDLIIADRSFVSGIAY------AEDLFPEAYELNL 106 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS-LRESACLDYFER 164 ++Q ++PD I+ + + KR++N+++ + E +DY R Sbjct: 107 FAMQGLLPDKVIVFKIDQEDLCKRLKNKHNDVIEKRGMDYLLR 149 >gi|15920677|ref|NP_376346.1| thymidylate kinase [Sulfolobus tokodaii str. 7] gi|23821799|sp|Q975E6|KTHY1_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|15621460|dbj|BAB65455.1| 190aa long hypothetical thymidylate kinase [Sulfolobus tokodaii str. 7] Length = 190 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 32/185 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------VLLSCGV 59 FISFEGI+GAGKTT + L++K Y+V +T+EP E + VLL+ Sbjct: 4 FISFEGIDGAGKTTLAKKVYEVLKKKGYNVILTQEPFTREITELIKKAGWNDPVLLT--- 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++F+A R H++ ++ + +I+L DR+ S+ AYQ L LD Sbjct: 61 ---------LLFSADRAFHIKWIME---QKPEIVLMDRYFHSTIAYQS------VLGLDE 102 Query: 120 --LQEISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRES-ACLDYFERKDVMIHEKRR 174 ++E++ + PD +LD+ V+ +KR++ ++++ E A L+ +K + + K Sbjct: 103 KWIEEVNSKFPKPDIVFLLDIKVNEAIKRIRKDDQFNFEEKIATLEAVRKKYLELARKYN 162 Query: 175 QIFLD 179 I LD Sbjct: 163 FIVLD 167 >gi|301386509|ref|ZP_07234927.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13] gi|302062080|ref|ZP_07253621.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40] gi|302134676|ref|ZP_07260666.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 138 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 D++YAYQG H + +L++ ++ PD T++ DLPV+IGL R R L Sbjct: 27 DATYAYQGGGRGLSHERIAALEQFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 80 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 D FE++ + R +L+ A+ +P R +VD+A S V ++ ++ EL++ Sbjct: 81 DRFEQEGRAFFDAVRSTYLNRAKAEPARYRLVDAAQSLADVQASLDKLLPELLE 134 >gi|76664864|emb|CAJ17870.1| thymidylate kinase [Candidatus Phytoplasma solani] gi|76664904|emb|CAJ17888.1| thymidylate kinase [Candidatus Phytoplasma solani] Length = 115 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 2/103 (1%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEG++G GKTT I LK++L+ ++ V + + G + + R++ L+ Sbjct: 5 FISFEGLDGGGKTTLIKQLKKYLKNQHKKVIICQGLGSSLIGKPIRNLFLNQ--SNLSPN 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 ++ L E +I P+L++G I+L DR+ DS++AYQ + Sbjct: 63 TRFLLSLTNMLQTQEELIIPSLLKGYIVLIDRWYDSTFAYQSD 105 >gi|313125419|ref|YP_004035683.1| thymidylate kinase [Halogeometricum borinquense DSM 11551] gi|312291784|gb|ADQ66244.1| thymidylate kinase [Halogeometricum borinquense DSM 11551] Length = 199 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 10/146 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EG++G+GKTT L D TREP + +A V S ++ + Sbjct: 1 MLITLEGLDGSGKTTAWEALHDVYP----DAVFTREPTESWYGDA---VYRSMSDEDADS 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQE 122 AE +F A DH+ V+RPAL + K+++ DR+ DS +AYQ D+ LD ++ Sbjct: 54 LAELFLFTADHADHLSRVVRPALADDKLVISDRYSDSRFAYQAATLEDADLRRPLDYIRG 113 Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRV 147 I PD TI LD+ + R Sbjct: 114 IHAAFSRPPDATIFLDVDPETAAARA 139 >gi|197294394|ref|YP_001798935.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853721|emb|CAM11639.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 209 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 17/167 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG++G+GKTT I +K LQ +N +V + G + R + L+ + + Sbjct: 4 IIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLTH--ENLDNQT 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----QGERDSSQHLFLDSLQ 121 ++ + + E I P + KI+L DR+L S++AY Q +RD +F + Sbjct: 62 RLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY--QIFYNLFN 119 Query: 122 EISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR--ESACLDYFER 164 + PD T+ L +IG+ KR Q+ + L ES+ + YF++ Sbjct: 120 RF----IKPDMTVYLKTNPEIGINRKRTQSNHKLDVIESSPISYFKK 162 >gi|197294444|ref|YP_001798985.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853771|emb|CAM11700.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 209 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 17/167 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG++G+GKTT I +K LQ +N +V + G + R + L+ + + Sbjct: 4 IIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLTH--ENLDNQT 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----QGERDSSQHLFLDSLQ 121 ++ + + E I P + KI+L DR+L S++AY Q +RD +F + Sbjct: 62 RLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY--QIFYNLFN 119 Query: 122 EISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR--ESACLDYFER 164 + PD T+ L +IG+ KR Q+ + L ES+ + YF++ Sbjct: 120 RF----IKPDMTVYLKTNPEIGINRKRTQSNHKLDVIESSPISYFKK 162 >gi|272761235|gb|ACZ95829.1| thymidylate kinase [Jujube witches'-broom phytoplasma] Length = 217 Score = 65.9 bits (159), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 83/150 (55%), Gaps = 13/150 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKTT I +++ L+++ +V + G + + R + L+ A+ Sbjct: 6 LIVFEGLDGSGKTTLIQKIRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT------NAQ 59 Query: 66 AEAI---VFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120 + + + + A + + E I+P L KI+L DR+L S++AYQ R+ ++ L +L Sbjct: 60 LKPLTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNYQLFNL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 ++ Q + PD T+ L + +GL+R QN+ Sbjct: 120 --LNKQFIKPDMTVYLKIKPQLGLERKQNQ 147 >gi|85057354|ref|YP_456270.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789459|gb|ABC65191.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 210 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 13/166 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT+ I +++ LQ++ +V R G + + R L+ + Sbjct: 3 LIIFEGLDGSGKTSLIKSVQQELQKQGNEVVAIRGLGSSTIGNSIRETFLTH--NTLHNL 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQE 122 + A + + E I+P L KI+L R+L S++AY+ + D + H+F Sbjct: 61 TRYFLSFANMIQNQEESIKPHLQTNKIILVKRWLGSNFAYRVYPSKIDKNYHIF----NN 116 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR----ESACLDYFER 164 +S + + P+ TI L + +GL+R N+ + + E++ L YF++ Sbjct: 117 LSKKFIKPNITIYLKIHPQLGLERKINQKNHQLDVIETSSLTYFQQ 162 >gi|149193824|ref|ZP_01870922.1| thymidylate kinase [Caminibacter mediatlanticus TB-2] gi|149135777|gb|EDM24255.1| thymidylate kinase [Caminibacter mediatlanticus TB-2] Length = 193 Score = 65.5 bits (158), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 12/134 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I LLK K ++ +EPG T + R +LL+ ++ Sbjct: 1 MYIAIEGIDTAGKSTQIELLK-----KEFNAIFIKEPGFTSFGKKIREILLN---EDISK 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A R + +E V++P + K+++ DR + S AY E L +L + + Sbjct: 53 KAELFLFLADRSETIEEVVKPNI--NKLIISDRSVISGIAYAMEFFDFDMLV--NLNKFA 108 Query: 125 VQEVMPDCTIILDL 138 + P+ IIL L Sbjct: 109 TDSIFPEFVIILKL 122 >gi|16081254|ref|NP_393560.1| thymidylate kinase [Thermoplasma acidophilum DSM 1728] gi|13629142|sp|Q9HLZ2|KTHY_THEAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|10639227|emb|CAC11229.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 193 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 22/153 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+GAGKTT + L + Y V++T+EP T E GV+ F Sbjct: 1 MFIAIEGIDGAGKTTLARGIGNMLLGEGYRVYMTKEP--TDGMEN----YAGDGVELF-- 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFL 117 + F R H + R + G+I++CDR++ SSYAYQ E ++ Sbjct: 53 ----LKFTINRYAHQREIDRH-IKNGEIVICDRYIRSSYAYQFEGIAEFFGNSEKAWEWM 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 DS+ EI ++ PD I +D+ + ++R+ R Sbjct: 108 DSVSEII--KIRPDVQIYVDVDEETAMERISRR 138 >gi|284044447|ref|YP_003394787.1| thymidylate kinase [Conexibacter woesei DSM 14684] gi|283948668|gb|ADB51412.1| thymidylate kinase [Conexibacter woesei DSM 14684] Length = 210 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 15/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F+ EG++GAG TT L L+ R + V +T+EP P R + G Sbjct: 6 GRFVVVEGLDGAGTTTQAERLAAMLRTRGGHAVELTKEPTNGPLGAVLRQAI--EGRVAL 63 Query: 63 GAEAEAIVFAAARLDHVENVIR---PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A A+ FAA R DH+ N + AL G+ ++ DR++ SS AY S+ Sbjct: 64 DPVALALAFAADRADHLFNPVNGVVAALDAGRWVVSDRYVLSSLAYNRGGVVSREW---- 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E++ + + PD T+ +D+ +I L+R+ R S E F ++ ++ R L Sbjct: 120 VAELNARAIAPDLTVFVDVDPEICLERIGARSSADE-----LFHSREQLVAVDRNYRDLI 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A + VD + S +V I V E Sbjct: 175 AAGHVHGPLATVDGSGSIDAVHDAIWTAVGE 205 >gi|148264686|ref|YP_001231392.1| dTMP kinase [Geobacter uraniireducens Rf4] gi|146398186|gb|ABQ26819.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 227 Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 17/149 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----RHVLLSCG 58 G ++ EG++G+GK+T + LLKR+L+ + V T +A RH+L Sbjct: 11 GKLVAVEGLDGSGKSTQLYLLKRWLELRGLKVFFTEWNSSVIVKKATSKGKKRHLLTPTT 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ AA D E I P L G ++LCDR+ +++A R S +L Sbjct: 71 F--------SLIHAADFADRYERQILPLLKAGYLVLCDRYFYTAFARDAVRGCS-CTWLR 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147 SL E + + PD T+ D P+ + L R+ Sbjct: 122 SLYEFARR---PDLTLFFDTPLPVALSRI 147 >gi|325187412|emb|CCA21950.1| thymidylate kinase putative [Albugo laibachii Nc14] Length = 228 Score = 65.1 bits (157), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 97/226 (42%), Gaps = 16/226 (7%) Query: 1 MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 MNS G+FI EG++ GKTT LL L + + + R P T L+ Sbjct: 1 MNSKRGVFILIEGLDCCGKTTQTKLLHEALTKMSSAAELLRFPDRTTPTGKLIDAYLTSK 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLF 116 ++ A ++F A R + E I L GK ++ DR YAY G S + Sbjct: 61 DEQVNDRAIHLLFTANRWEAAEK-IEAILNSGKNIVMDR-----YAYSGAVFSASKSGMD 114 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ + + PD I LDLPVD KR Y +++ E+ + H + I Sbjct: 115 MNWCWQPEIGLPRPDAVIFLDLPVDSASKR--EDYGAERYENVEFQEKVRLNFH---KLI 169 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ-KRVSPLSS 221 LD ++ R H +D+ + + V + + +Q + +PL+S Sbjct: 170 ELDHSQKDESRWHFIDANDTIEKVQARVFEVAQRCIQVSQYTPLAS 215 >gi|312194212|ref|YP_004014273.1| hypothetical protein FraEuI1c_0317 [Frankia sp. EuI1c] gi|311225548|gb|ADP78403.1| protein of unknown function DUF894 DitE [Frankia sp. EuI1c] Length = 820 Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60 ++GLF++ EG + + + L+R+L +V VT E P T EAA + Sbjct: 560 HAGLFVAIEGADFRSRADQLESLRRWLLEAGREVLVTAESPADTSELEAALRTVQPDPAA 619 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A++ AA +HV VI PAL G ++L D ++D+ A Q + L L Sbjct: 620 GLHPRTTALLTAAIHAEHVARVIEPALARGAVVLTDSYVDAEIARQSAEACAALDELTIL 679 Query: 121 QEISVQEVMPDCTIILDL 138 + + ++PD TI+LD+ Sbjct: 680 SHWATRSLVPDVTILLDV 697 >gi|284175009|ref|ZP_06388978.1| dTMP kinase [Sulfolobus solfataricus 98/2] gi|261602452|gb|ACX92055.1| thymidylate kinase [Sulfolobus solfataricus 98/2] Length = 189 Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 13/145 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I+ EGI+G+GKTT +LLK +L+ K +V VTRE P +E ++ G ++ Sbjct: 4 LIAIEGIDGSGKTTLANLLKEYLESKMKLNVIVTRE----PFSEDIIKLIEKIGWND--P 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++FAA R HV + + + +++ DR+ SS AYQG + ++ ++ Sbjct: 58 ILLVLLFAADRALHVNWLSK--IRNADLIILDRYYFSSIAYQGALGVDEKW----IKTVN 111 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN 149 PD I+LDLP+++ + R++N Sbjct: 112 SYFPKPDMVILLDLPIEVAISRIKN 136 >gi|218883455|ref|YP_002427837.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n] gi|218765071|gb|ACL10470.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n] Length = 206 Score = 64.7 bits (156), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 8/143 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++GAGKTT L L + T EP + E R V+ S + Sbjct: 5 GCFIVLEGLDGAGKTTVARRLVEDLSSRGIPASYTYEPTDS---EIVR-VIKSTYNNLRD 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +A+ FA RL HV+N ++P L +G ++ DR+ SS AYQ S+ + + E+ Sbjct: 61 AYIDALAFALDRLIHVKNWVKPLLDKGVTVISDRYFYSSVAYQ----SASGAPFEWVIEV 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + + PD I LD+ + GL R Sbjct: 117 NKFAMKPDVAIYLDIEPEEGLSR 139 >gi|171909511|ref|ZP_02924981.1| thymidylate kinase [Verrucomicrobium spinosum DSM 4136] Length = 218 Score = 64.7 bits (156), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 13/221 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGKTT + L ++ + +++EP + E R + S Sbjct: 1 MLIAIEGIDGAGKTTVSATLAQWCGERGLLCALSKEP---TSLEWGRKLRESAASGRLTL 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F R H E I+PAL E I++ DR+ S+ AYQG R ++ L + E + Sbjct: 58 AQELDLFHKDREQHSEGSIQPALDEDAIMVLDRYYWSTAAYQGARGANVDDVL-AFNETN 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + L + G R++ R S FE DV + R+IFL + Sbjct: 117 FPLPDLVLLLDLPVAT--GQDRIRVRGDQPNS-----FE--DVDALSRCREIFLQLPGRS 167 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 RC IVD++ ++ V+ L + + Q+++ +S + + Sbjct: 168 QARCVIVDASRPWREVSKECLALFKQAAQQKLWKTASPRSL 208 >gi|223985441|ref|ZP_03635501.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM 12042] gi|223962584|gb|EEF67036.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM 12042] Length = 143 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 12/151 (7%) Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQEISV 125 +++AAAR H+ + PAL GK+++CDRF+DSS AYQG ++L ++ S+ E ++ Sbjct: 1 MLYAAARRQHLIEKVLPALEAGKVVICDRFVDSSLAYQG---FGRNLGIEEVLSINEFAI 57 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T+ LDL GL R+ R + D +++ + H + + + + Sbjct: 58 EGHWPDKTLYLDLAPQQGLDRIATRQN------KDRLDQEKIDFHLRVCEGYRQVRDRFA 111 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +R ++D+A V + + + L+ + V Sbjct: 112 ERMIVIDAAQPVDQVIADCVKAIGALIHREV 142 >gi|296273496|ref|YP_003656127.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299] gi|296097670|gb|ADG93620.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299] Length = 188 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 12/159 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ AGK+T + +L +K + T+EPG T R + L+ + Sbjct: 1 MYVVIEGIDTAGKSTQLEIL----SKKFSNAIFTKEPGATKLGSKLREMALNG--EAKSK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI+P + K+++ DR + S AY S + +L I+ Sbjct: 55 IAEMFLFLADRAEHIEEVIKPNI--DKMIISDRSVISGIAYAS---SLPIEVVTTLNLIA 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYF 162 + +P TI+L+L D KR+ N+ + ES +DY Sbjct: 110 TENTLPSHTILLELSKDELTKRLGNKSNDSIESRGIDYL 148 >gi|225376152|ref|ZP_03753373.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM 16841] gi|225211979|gb|EEG94333.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM 16841] Length = 206 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 16/168 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ +G G GK+T I +K L+ Y V++TREP T R ++ Sbjct: 9 GYFIAVDGPNGVGKSTLIEAIKNKLEVLGYAVYITREPTDTKLGNYLREF-----AEKHS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A + AA R +H+ N I PAL EG++++ DR++ SS Q S L + EI Sbjct: 64 GISLACLVAADRYEHMTNEIIPALEEGQLVISDRYILSSLILQEMDGVSATFVLTANSEI 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL-------RESACLDYFER 164 + PD + + + KR+ R +L + + LD+ ER Sbjct: 124 ----IKPDLQLAVFADERVLQKRLSERDTLTRFEKGNQSKSELDFMER 167 >gi|325973666|ref|YP_004250730.1| thymidylate kinase [Mycoplasma suis str. Illinois] gi|323652268|gb|ADX98350.1| thymidylate kinase [Mycoplasma suis str. Illinois] Length = 218 Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR------KNYDVHVTREPGGTPAAEAARHVLLSCG 58 +FI EG++ +GKTT I+ LK+ L K +H T EP G P + LS Sbjct: 1 MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYG-PEEFKEKFSELSSP 59 Query: 59 V----DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + E+++F A R +H++ I+P L E +L+CDR+ S+ AYQ Sbjct: 60 IFSNSYSLSPVTESLLFLAIRAEHLKTFIKPKLEENSLLICDRYFLSTLAYQSYLKGVSC 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDL 138 +L S + + P+ I+++ Sbjct: 120 EWLSSNMKFISEGFSPNLVFIVNV 143 >gi|70607738|ref|YP_256608.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] gi|68568386|gb|AAY81315.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] Length = 213 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 14/149 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---TREPGGTPAAEAARHVLLSCGVD 60 G+ I+FEGI+G+GK++ SLLK +L ++ Y + E EA + LL+ Sbjct: 3 GILIAFEGIDGSGKSSQASLLKSWLSKRRYTFITEWNSSEWIHDIIKEAKKKNLLT---- 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +++ A D E I P L G +++ DR++ ++YA RDS + + ++ + Sbjct: 59 ---PLTFSLIHATDFADRYEKYILPMLKCGFVVIADRYIYTAYA----RDSVRGVDIEWV 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQN 149 +++ V PD T + +P ++ LKR+++ Sbjct: 112 KKLYSFAVKPDITFYIRVPSEVALKRLKS 140 >gi|207110221|ref|ZP_03244383.1| thymidylate kinase [Helicobacter pylori HPKX_438_CA4C1] Length = 81 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 9/88 (10%) Query: 5 LFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG++GAGK+T + LLK RF + T+EPGGT E+ R + L+ + E Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRF-----KNALFTKEPGGTKIGESLRRIALNENISEL- 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGK 91 A A +F + R +HVE+VI+PAL K Sbjct: 55 --ARAFLFLSDRAEHVESVIKPALKRKK 80 >gi|85057502|ref|YP_456418.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789607|gb|ABC65339.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 210 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 13/165 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG++G+GKTT I +++ L+++ ++V + G + + R + L+ + Sbjct: 4 IVFEGLDGSGKTTLIQKIRKQLEKQGHEVINLQGLGSSSIGQPLRDIFLTN--SQLKPLT 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSLQEI 123 ++ A E I+P L KI+L DR+L S+ AYQ D + LF + Sbjct: 62 RYLLSFANMQQIQEEEIKPHLATNKIILIDRWLGSNLAYQAYPHNIDKNYQLF----NLL 117 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYFER 164 + Q + P+ T+ L + +GL+R QN + + E+ L YF + Sbjct: 118 NKQFIKPNMTVYLKIKPQLGLERKQNQKDHKLDVIETHPLSYFHQ 162 >gi|325990109|ref|YP_004249808.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis KI3806] gi|323575194|emb|CBZ40859.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis] Length = 218 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 11/144 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR------KNYDVHVTREPGGTPAAEAARHVLLSCG 58 +FI EG++ +GKTT I+ LK+ L K +H T EP G P + LS Sbjct: 1 MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYG-PEEFKEKFSELSSP 59 Query: 59 V----DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + E+++F A R +H+ I+P L E +L+CDR+ S+ AYQ Sbjct: 60 IFSNSYSLSPVTESLLFLAIRAEHLRKFIKPKLEENSLLICDRYFLSTLAYQSHLKGVSC 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDL 138 +L S + + P+ I+++ Sbjct: 120 EWLSSNMKFISEGFSPNLVFIVNV 143 >gi|315636925|ref|ZP_07892149.1| thymidylate kinase [Arcobacter butzleri JV22] gi|315478755|gb|EFU69464.1| thymidylate kinase [Arcobacter butzleri JV22] Length = 189 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 45/159 (28%), Positives = 82/159 (51%), Gaps = 12/159 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++S EGI+ AGK+T +++ L++K + T+EPGGT R ++ G + + Sbjct: 1 MYVSIEGIDTAGKSTQLNI----LEKKFPNAIFTKEPGGTALGIKLRA--MALGGEAKSS 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI+P + +++ DR + S AY + + + L L I+ Sbjct: 55 IAEMFLFLADRAEHIEEVIKPN--KNSLVISDRSMVSGIAYANQFEIDK---LVELNLIA 109 Query: 125 VQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYF 162 ++P I+L+L P ++ + Q E +DY Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKANDSIELRGIDYL 148 >gi|148926934|ref|ZP_01810611.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845018|gb|EDK22115.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8486] Length = 192 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 ++ P I L+ ++ +Q R S +E LD E++ + Sbjct: 111 LENFFPQKIIFLEGDANL----IQERLSQKE---LDSIEKRGI 146 >gi|213419385|ref|ZP_03352451.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 133 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 11/141 (7%) Query: 79 VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL 138 VE VI+PAL +G ++ DR S+ AYQG L +L++ + + PD T+ LD+ Sbjct: 2 VETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDV 61 Query: 139 PVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS 196 ++GLKR + R L E D+F R R +L++A Q R +D+ Sbjct: 62 TPEVGLKRARARGDLDRIEQESFDFFNRT--------RARYLELA-AQDSRIRTIDATQP 112 Query: 197 FQSVATNILNIVWELVQKRVS 217 +V +I V + VQ++ + Sbjct: 113 LDAVMRDIRATVTKWVQEQAA 133 >gi|297619540|ref|YP_003707645.1| thymidylate kinase [Methanococcus voltae A3] gi|297378517|gb|ADI36672.1| thymidylate kinase [Methanococcus voltae A3] Length = 223 Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G+GK+T +L + + + EP + + R LS G F E Sbjct: 28 FIVFEGIDGSGKSTQAKMLADRI-----NAILDYEPTNSEVGKLIRKG-LSEGC--FEKE 79 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FA R++H + + + +E ++CDR++ SS YQ ++Q + ++ + I+ Sbjct: 80 TLALLFAGDRVEHCKELAKK--LEKNHIVCDRYVYSSIVYQ----NTQGIDIEYIYNINR 133 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +PD ++LDL ++ + RV +R E F++ +I EK QIF D Sbjct: 134 YARVPDIVVLLDLNPELSMLRVNDRTGNNEIFEKIEFQK---IIREKYLQIFED 184 >gi|196234358|ref|ZP_03133186.1| dTMP kinase [Chthoniobacter flavus Ellin428] gi|196221550|gb|EDY16092.1| dTMP kinase [Chthoniobacter flavus Ellin428] Length = 245 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 15/149 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG----TPAAEAARHVLLSCG 58 SG ++ EG++G+GK+T I L+KR+L+ + Y V T ++ + LL+ Sbjct: 27 SGKLLAVEGLDGSGKSTQIYLVKRWLELEGYRVFFTEWNSSILVKKSTSKGKKRQLLT-- 84 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ A D E I P L G ++LCDR++ ++ A RD+ + + D Sbjct: 85 -----PTTFSLIHATDFADRYERQILPLLRAGYLVLCDRYIFTALA----RDAVRGVDRD 135 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147 ++++ V+PD T+ +P++ L R+ Sbjct: 136 WVEQLYSFAVLPDITLYFRVPLETSLNRI 164 >gi|319956694|ref|YP_004167957.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511] gi|319419098|gb|ADV46208.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511] Length = 191 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 8/133 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T I R + ++ + +TREPGGT E AR +LL + Sbjct: 1 MYVLFEGIDTCGKSTQI----RLIAAEHPEAIITREPGGTRFGEKAREILLEAKLQ--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H E ++RP K+L+ DR S Y L +L + Sbjct: 55 RAELLLFLADRAEHYEEIVRPN--RDKLLISDRGFLSGIGYALANGGVSLEELIALNHFA 112 Query: 125 VQEVMPDCTIILD 137 +Q PD I + Sbjct: 113 LQGDWPDHIIFFE 125 >gi|159028337|emb|CAO87235.1| tmk [Microcystis aeruginosa PCC 7806] Length = 207 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 103/216 (47%), Gaps = 22/216 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----D 60 FI FEGI+G+G +T LL+ + ++ ++ EP R ++ + + + Sbjct: 5 FIVFEGIDGSGTSTQAKLLQEYFFKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIQEQN 64 Query: 61 EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +F + A +FAA R H+ N V + E ++ R+ SS AY + + F Sbjct: 65 QFDRQM-AYLFAADRHYHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNC-NNPEEFAF 122 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L + PD I +D+ DI L R++NR A + +E+++ ++ K RQ+ Sbjct: 123 VRQLNQ---HFPNPDIVIYIDVIPDISLARIKNR------AITEVYEKQEKLM--KVRQM 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F++I + D +D + + + NI+N + +L+ Sbjct: 172 FIEIFKEYKDNYLQLDGNDTIEHLHRNIINYLEQLI 207 >gi|15790812|ref|NP_280636.1| thymidylate kinase [Halobacterium sp. NRC-1] gi|169236558|ref|YP_001689758.1| thymidylate kinase [Halobacterium salinarum R1] gi|14285513|sp|Q9HNV4|KTHY_HALSA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|229621738|sp|B0R6P3|KTHY_HALS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|10581368|gb|AAG20116.1| thymidylate kinase [Halobacterium sp. NRC-1] gi|167727624|emb|CAP14412.1| dTMP kinase [Halobacterium salinarum R1] Length = 199 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 16/148 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62 + ++ EG++G+GKTT L R ++D V T EP + +A R + D Sbjct: 1 MLVTLEGLDGSGKTTVWESL-----RASHDDGVTFTAEPTDSQYGQAVRRSESAADADPI 55 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL--FLD 118 AE +F A DH+ V+ PAL G +++ DR+ DS YAYQG D+ ++ Sbjct: 56 ---AELFLFTADHADHLSRVVSPALDRGDVVISDRYSDSRYAYQGATLADTVPRAMEYVR 112 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 + + + PD T+ D+ D G R Sbjct: 113 GIHQPWTRP--PDVTLYFDVDPDTGAAR 138 >gi|15897682|ref|NP_342287.1| thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2] gi|227830328|ref|YP_002832108.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|229579145|ref|YP_002837543.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|229582100|ref|YP_002840499.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] gi|284997753|ref|YP_003419520.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] gi|11133144|sp|Q9UXG7|KTHY1_SULSO RecName: Full=Probable thymidylate kinase 1; AltName: Full=dTMP kinase 1 gi|6015696|emb|CAB57523.1| thymidylate kinase [Sulfolobus solfataricus P2] gi|13813955|gb|AAK41077.1| Thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2] gi|227456776|gb|ACP35463.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|228009859|gb|ACP45621.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|228012816|gb|ACP48577.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] gi|284445648|gb|ADB87150.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] Length = 189 Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 13/145 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I+ EGI+G+GKTT +LLK L+ K +V VTRE P +E ++ G ++ Sbjct: 4 LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTRE----PFSEDIIKLIEKIGWND--P 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++FAA R HV + + + + +++ DR+ SS AYQG + ++ ++ Sbjct: 58 ILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQW----IKMVN 111 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN 149 PD I+LDLP+++ + R++N Sbjct: 112 SYFPKPDMVILLDLPIEVAISRIKN 136 >gi|255322189|ref|ZP_05363335.1| thymidylate kinase [Campylobacter showae RM3277] gi|255300562|gb|EET79833.1| thymidylate kinase [Campylobacter showae RM3277] Length = 192 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 12/128 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+GAGK+T I+ L + VT+EPGGT E R +LL ++ Sbjct: 1 MYILFEGIDGAGKSTQIARLAAAYTQ----AIVTKEPGGTKLGENLREILLK--ENDLDK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDSLQE 122 AE ++F A R +H +I+P L K++L DR S +YA G S + L +L + Sbjct: 55 RAEILLFLADRAEHFGKIIKPNL--DKMILSDRGFVSGMAYALAGGNFSFEELL--NLNK 110 Query: 123 ISVQEVMP 130 ++Q P Sbjct: 111 FALQGNFP 118 >gi|325474687|gb|EGC77873.1| thymidylate kinase [Treponema denticola F0402] Length = 209 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%) Query: 6 FISFEGIEGAGKTTHISLLK-RF-LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 F+ FEGI+G+G T+ I LLK RF + K+ V T+EP P R L G + Sbjct: 6 FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63 Query: 64 AEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +FAA R +H+ + I + +G+ + DR++ SS AYQ ++ L LQ Sbjct: 64 PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAAD---LAKLQ 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRRQIFLD 179 DLPVDI + RV R S L+ +E K + ++ ++I + Sbjct: 121 NEGFPLPE--FLFFFDLPVDISMNRVMGR-----SNVLEIYEEKTFQYKVQDEYKKIIDE 173 Query: 180 IARNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211 +P+ I+++ + + + +I+ +L Sbjct: 174 YRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206 >gi|227827632|ref|YP_002829412.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|229584836|ref|YP_002843338.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238619800|ref|YP_002914626.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|227459428|gb|ACP38114.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|228019886|gb|ACP55293.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238380870|gb|ACR41958.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|323474682|gb|ADX85288.1| dTMP kinase [Sulfolobus islandicus REY15A] gi|323477416|gb|ADX82654.1| dTMP kinase [Sulfolobus islandicus HVE10/4] Length = 189 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 13/145 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I+ EGI+G+GKTT +LLK L+ K +V VTRE P +E ++ G ++ Sbjct: 4 LIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTRE----PFSEDIIKLIEKIGWND--P 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++FAA R HV + + + + +++ DR+ SS AYQG + ++ ++ Sbjct: 58 ILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQW----IKMVN 111 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN 149 PD I+LDLP+++ + R++N Sbjct: 112 SYFPKPDMVILLDLPIEVAISRIKN 136 >gi|170290822|ref|YP_001737638.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174902|gb|ACB07955.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8] Length = 191 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 12/146 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++FEGI+GAGKTT L L T+EP + + L G E Sbjct: 1 MLVAFEGIDGAGKTTQSRRLLDKLMELGMRAIYTKEPTDGEIGKILKKAL--KGEIELDQ 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++FAA R++H IR ++G I++ DR+L SS AYQG L + + E++ Sbjct: 59 RTIALLFAADRIEH----IRSLKVDG-IIILDRYLLSSLAYQG-----AFLPIQWINELN 108 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150 +PD LD+ D+ + R++++ Sbjct: 109 RWVRLPDIVFYLDISPDVAISRIEDK 134 >gi|304314109|ref|YP_003849256.1| thymidylate kinase [Methanothermobacter marburgensis str. Marburg] gi|302587568|gb|ADL57943.1| predicted thymidylate kinase [Methanothermobacter marburgensis str. Marburg] Length = 194 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 11/180 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 ++I FEGI+G+GKTTH L +L+ Y V REP + R +L S G Sbjct: 1 MYICFEGIDGSGKTTHSVLTAEWLRENGYRVFTVREPTDSRIGGLIREMLSSPDARTPDG 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A++FAA RL + G +++ DR SS YQ + + EI Sbjct: 61 QRILALLFAADRLTLRSKI--EGEWSGSVVVSDRCYYSSMVYQEP--------AEWVSEI 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD I+LDL V++ ++R + + L + + + +K +D AR Sbjct: 111 NRFAPQPDIVILLDLDVELAMERCGGTDEFEDPSFLSRVRERYLELADKNEFYIVDAARG 170 >gi|157737212|ref|YP_001489895.1| thymidylate kinase [Arcobacter butzleri RM4018] gi|254808274|sp|A8ETF2|KTHY_ARCB4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157699066|gb|ABV67226.1| thymidylate kinase [Arcobacter butzleri RM4018] Length = 189 Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 12/159 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++S EGI+ AGK+T +++L++ + T+EPGGT R ++ G + + Sbjct: 1 MYVSIEGIDTAGKSTQLNILEKTFPNAIF----TKEPGGTALGIKLRA--MALGGEAKSS 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI+P + +++ DR + S AY + + + L L I+ Sbjct: 55 IAEMFLFLADRAEHIEEVIKPN--KNSLVISDRSVVSGIAYANQFEIDK---LIELNLIA 109 Query: 125 VQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYF 162 ++P I+L+L P ++ + Q E +DY Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKANDSIELRGIDYL 148 >gi|42528099|ref|NP_973197.1| thymidylate kinase [Treponema denticola ATCC 35405] gi|41819144|gb|AAS13116.1| thymidylate kinase [Treponema denticola ATCC 35405] Length = 209 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 19/213 (8%) Query: 6 FISFEGIEGAGKTTHISLLK-RF-LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 F+ FEGI+G+G T+ I LLK RF + K+ V T+EP P R L G + Sbjct: 6 FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63 Query: 64 AEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +FAA R +H+ + I + +G+ + DR++ SS AYQ ++ L LQ Sbjct: 64 PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAAD---LAKLQ 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRRQIFLD 179 DLPVDI + RV R S L+ +E K + ++ ++I + Sbjct: 121 NDGFPLPE--FLFFFDLPVDISMNRVMGR-----SNVLEIYEEKTFQYKVQDEYKKIIDE 173 Query: 180 IARNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211 +P+ I+++ + + + +I+ +L Sbjct: 174 YRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206 >gi|86152174|ref|ZP_01070386.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153341|ref|ZP_01071545.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612951|ref|YP_001000455.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176] gi|283957252|ref|ZP_06374713.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336] gi|315124289|ref|YP_004066293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|166221735|sp|A1VZB4|KTHY_CAMJJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|85840959|gb|EAQ58209.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94] gi|85843067|gb|EAQ60278.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249371|gb|EAQ72331.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176] gi|283791264|gb|EFC30072.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336] gi|315018011|gb|ADT66104.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 192 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILK--INQNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 ++ P I L ++ +Q R S +E LD E++ + Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146 >gi|57237611|ref|YP_178859.1| thymidylate kinase [Campylobacter jejuni RM1221] gi|86150209|ref|ZP_01068436.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597533|ref|ZP_01100767.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25] gi|205356734|ref|ZP_03223494.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8421] gi|218562394|ref|YP_002344173.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|14285520|sp|Q9PPF3|KTHY_CAMJE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920815|sp|Q5HV26|KTHY_CAMJR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|57166415|gb|AAW35194.1| thymidylate kinase [Campylobacter jejuni RM1221] gi|85839325|gb|EAQ56587.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190125|gb|EAQ94100.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360100|emb|CAL34894.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205345373|gb|EDZ32016.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8421] gi|315058220|gb|ADT72549.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni S3] gi|315928307|gb|EFV07623.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929197|gb|EFV08419.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 305] Length = 192 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 ++ P I L ++ +Q R S +E LD E++ + Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146 >gi|307721020|ref|YP_003892160.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294] gi|306979113|gb|ADN09148.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294] Length = 191 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 14/137 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I+ LK+ + T+EPGGT + R ++LS Sbjct: 1 MYIAIEGIDTAGKSTQIAALKKHFPQ----AVTTKEPGGTEIGKEIREMVLSAKTK--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSLQ 121 AE ++F A R +H++ VI P L K+++ DR S AY Q + D+ ++L+ Sbjct: 55 RAEFLLFLADRAEHIKEVIEPNLH--KVIISDRSAVSGVAYALIQEDIDTKDLVYLN--- 109 Query: 122 EISVQEVMPDCTIILDL 138 + + +++ P +L L Sbjct: 110 DFATKKIYPKKIFLLRL 126 >gi|157415037|ref|YP_001482293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81116] gi|172047110|sp|A8FLH9|KTHY_CAMJ8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157386001|gb|ABV52316.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 81116] gi|315931181|gb|EFV10153.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 327] Length = 192 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 ++ P I L ++ +Q R S +E LD E++ + Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146 >gi|14161247|gb|AAK54673.1|AF251151_2 TMP kinase [Loofah witches'-broom phytoplasma] Length = 209 Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 50/209 (23%), Positives = 104/209 (49%), Gaps = 12/209 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKTT I L++ L+++ + + + G + R++ L+ ++ Sbjct: 3 LIVFEGLDGSGKTTLIQELQQKLKKQKINNKIYQGLGSSSIGTEIRNLFLNYNQVDYITR 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQE 122 + A++ + +I P L + ++++ DR+L S+YAYQ + + L L + Sbjct: 63 FYLSITNMAQIQ--KELIYPHLKQNQLIILDRWLPSTYAYQLFPYLKQTKSCFDLKELFD 120 Query: 123 ISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-RRQIFLD 179 I+ ++ + P I LD+ IG +R Q +++ LD E+K + H+ + + Sbjct: 121 ITHKKLFIQPHLLIYLDINPLIGKERKQT----QKNHQLDIIEQKSLTYHQTVHKGYYHY 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + Q ++ I++ S QS T I+ ++ Sbjct: 177 LTHYQNNKQLILNGIDSLQSNVTKIMKLI 205 >gi|307747676|gb|ADN90946.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni M1] Length = 192 Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKTH--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 ++ P I L ++ +Q R S +E LD E++ + Sbjct: 111 LENFFPQKIIFLKGDANL----IQERLSQKE---LDSIEKRGI 146 >gi|224372857|ref|YP_002607229.1| thymidylate kinase [Nautilia profundicola AmH] gi|254808301|sp|B9L9C1|KTHY_NAUPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|223588410|gb|ACM92146.1| thymidylate kinase [Nautilia profundicola AmH] Length = 194 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 49/158 (31%), Positives = 78/158 (49%), Gaps = 11/158 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I LLK + KN ++ +EPG T R ++ + D+ Sbjct: 1 MYIALEGIDTAGKSTQIELLKN--EYKN-NILFIKEPGFTKFGTKIREIIFN---DDISK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A R + +E ++P L K +L DR + S AY E L +L + + Sbjct: 55 KAELFLFLADRAETIEKFVKPNL--HKNILTDRSVISGIAYAMEFFDFNMLV--NLNKFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDY 161 + P+ IIL L + R+ Q + E LDY Sbjct: 111 TDGIFPEFVIILKLDKETLQYRLSQKNHDNIEKRGLDY 148 >gi|153951111|ref|YP_001398306.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97] gi|166221734|sp|A7H476|KTHY_CAMJD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|152938557|gb|ABS43298.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97] Length = 192 Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFTLNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 +++ P I L ++ +Q R S +E LD E++ + Sbjct: 111 LEDFFPQKIIFLKGDENL----IQERLSQKE---LDSIEKRGI 146 >gi|223040987|ref|ZP_03611247.1| thymidylate kinase [Campylobacter rectus RM3267] gi|222877743|gb|EEF12864.1| thymidylate kinase [Campylobacter rectus RM3267] Length = 192 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 12/134 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+GAGK+T I+ L + VT+EPGGT E R +LL ++ Sbjct: 1 MYILFEGIDGAGKSTQIARLATAYPQ----AIVTKEPGGTKLGENLREILLKE--NDLDK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDSLQE 122 AE ++F A R +H +I+P K++L DR S +YA G S + L SL + Sbjct: 55 RAEILLFLADRAEHSGKIIKPN--SDKMILSDRGFVSGMAYALAGGNFSFEELL--SLNK 110 Query: 123 ISVQEVMPDCTIIL 136 ++Q P + Sbjct: 111 FALQGNFPQKIVFF 124 >gi|284926012|gb|ADC28364.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni IA3902] Length = 192 Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 17/163 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKTN--QNKLIISDRSFISGMAYAKDFEND---LLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 ++ P I L + +Q R S +E LD E++ + Sbjct: 111 LENFFPQKIIFLKGDASL----IQERLSQKE---LDSIEKRGI 146 >gi|312136656|ref|YP_004003993.1| thymidylate kinase [Methanothermus fervidus DSM 2088] gi|311224375|gb|ADP77231.1| thymidylate kinase [Methanothermus fervidus DSM 2088] Length = 196 Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 54/199 (27%), Positives = 91/199 (45%), Gaps = 12/199 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+FEGI+G+GKTT + +L+R Y V P + A+ +L G ++ Sbjct: 1 MYIAFEGIDGSGKTTICKYISSYLRRNGYKVLTVGFPSNNEIGKLAKKML--KGEIKWNE 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++ A L + I+ L G I+L DR SS AY+ HL + +++I Sbjct: 59 IAFELLITADML-QCNHKIKKFLKNGGIVLSDRSPYSSIAYR------PHL-RNWIEKIH 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I LD+ VD LKR+ + L+ R + + ++ F+ I N+ Sbjct: 111 KPLIKPDIVIFLDVSVDNALKRIYKHDKYEKKKYLEIARRTYLRLSKELN--FVKINANK 168 Query: 185 PDRCHIVDSAHSFQSVATN 203 + +D H +S N Sbjct: 169 NFKKVFLDVKHIIESSVKN 187 >gi|224418120|ref|ZP_03656126.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491] gi|253827447|ref|ZP_04870332.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491] gi|313141655|ref|ZP_07803848.1| integral membrane protein [Helicobacter canadensis MIT 98-5491] gi|253510853|gb|EES89512.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491] gi|313130686|gb|EFR48303.1| integral membrane protein [Helicobacter canadensis MIT 98-5491] Length = 194 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 10/146 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EGI+ +GK+T I LK F ++ + T EPG T R +LL + + + Sbjct: 1 MYVAIEGIDTSGKSTQIQALKLFFKKAIF----TFEPGATNLGVRLREILLQDSI-QLDS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H +++ +++ DR L S AY + D L + + Sbjct: 56 RAEMLLFLADRAQHANEILQSH--ANNLIIADRSLISGMAYAKDFDFDT---LKTFNLFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150 Q ++P+ IIL+L D KR+ ++ Sbjct: 111 TQGILPNKVIILELQKDDLQKRLNSK 136 >gi|124005922|ref|ZP_01690760.1| thymidylate kinase [Microscilla marina ATCC 23134] gi|123988605|gb|EAY28246.1| thymidylate kinase [Microscilla marina ATCC 23134] Length = 232 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 22/198 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSCG-VDE 61 FI EG++G+GK+T + L+ LQ K +H G A + G +D+ Sbjct: 7 FIVIEGLDGSGKSTQLKLITAHLQNAGIKYQHIHFPVMGEGYYGQLTAEFLRGDLGALDQ 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-------QGERDSSQH 114 + A++FA R++H+E I L +G +++ DR+++S+ A+ Q E+D+ + Sbjct: 67 VHPKIAALIFAGNRVEHLEQ-INQWLADGYVVIADRYVNSNIAFQCAKFDNQTEKDTLKK 125 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM------ 168 L+ E ++ P ++ LD+P K + N+ RE Y + K + Sbjct: 126 WILEFEYEFNLLP-RPASSLFLDVPFASIKKSLTNQ---REGDDRAYLQGKSDIHEDSLD 181 Query: 169 IHEKRRQIFLDIARNQPD 186 + EK RQ +L + + QPD Sbjct: 182 LQEKVRQEYLQMVKEQPD 199 >gi|224437631|ref|ZP_03658584.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818] gi|313144083|ref|ZP_07806276.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818] gi|313129114|gb|EFR46731.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818] Length = 201 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 18/140 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58 +++ EG++ GK+T + LLK+ + + T+EPGG+ E+ R ++L Sbjct: 1 MYVVIEGVDTCGKSTQLELLKKHFPQAVF----TKEPGGSVIGESLRDLILFAPQRQGFV 56 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +DE+ AE ++F A R H + V++P + ++++ DR L SS AY D + + L+ Sbjct: 57 LDEY---AEFMLFLADRAQHYKEVLKPH--KNRLVISDRSLISSIAYAKHIDMDKAIMLN 111 Query: 119 SLQEISVQEVMPDCTIILDL 138 L ++ ++P +IL L Sbjct: 112 KL---VLRGILPQLVVILKL 128 >gi|148264611|ref|YP_001231317.1| dTMP kinase [Geobacter uraniireducens Rf4] gi|146398111|gb|ABQ26744.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 228 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 17/149 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----RHVLLSCG 58 G I+ EG++G+GK+T + LLKR+L+ + V+ T +A R +L Sbjct: 11 GKLIAVEGLDGSGKSTQLYLLKRWLELRGLKVYFTEWNSSVIVKKATSKGKKRQLLTPTT 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ +A D E I P L G ++LCDR++ +++A R S+ +L Sbjct: 71 F--------SLIHSADLADRYERQILPLLKAGYLVLCDRYVYTAFARDAVRGCSRT-WLR 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147 +L + PD T+ D P+ + L R+ Sbjct: 122 NLYGFARH---PDLTLFFDTPLSVALSRI 147 >gi|216906057|ref|YP_002333648.1| thymidylate kinase [Abalone shriveling syndrome-associated virus] gi|216263150|gb|ACJ71974.1| thymidylate kinase [Abalone shriveling syndrome-associated virus] Length = 270 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 9/105 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEF 62 +FI+ EGI+ GK+T L+R F Q + + +T EP + + LS Sbjct: 1 MFITIEGIDKIGKSTVAQGLQRKFSQYSDNSIVLTHEPFNFNGLSNFLKKYQLS------ 54 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 ++ E ++ AAR++H +I PA+ G I++CDRF+DS+ YQG Sbjct: 55 -SKVEILIQTAARIEHATRLINPAISSGSIVICDRFIDSTIVYQG 98 >gi|170077931|ref|YP_001734569.1| thymidylate kinase [Synechococcus sp. PCC 7002] gi|169885600|gb|ACA99313.1| thymidylate kinase [Synechococcus sp. PCC 7002] Length = 219 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 19/210 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEF 62 FI FEGI+G+G +T LL + QR+ ++ EP R L L D Sbjct: 9 FIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDPV 68 Query: 63 GAEAE-AIVFAAARLDHVENVIR---PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + A +FA R DH+ N I L G ++ R+ SS AY +++++ F+ Sbjct: 69 QLNRQLAYLFAGDRHDHLYNEIDGVFKQLAAGIQVITTRYYFSSLAYNAN-NAAEYEFIY 127 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + PD DLPV++ L+RVQ R + + +E K + + RQ + Sbjct: 128 RLNQDFPN---PDLVFYCDLPVEVALERVQRR------SHQEIYETKAKLT--QVRQNYQ 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 I + P +D+ +++ IL + Sbjct: 177 QIFQTYPGNWQQLDATQPPETIHQQILQTI 206 >gi|150399111|ref|YP_001322878.1| thymidylate kinase [Methanococcus vannielii SB] gi|166221757|sp|A6UP44|KTHY_METVS RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|150011814|gb|ABR54266.1| dTMP kinase [Methanococcus vannielii SB] Length = 198 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 14/145 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G+GKTT +L L + T EP R VL E E Sbjct: 4 FIVFEGIDGSGKTTQAKMLAEKL-----NAEYTCEPTTGKIGRTIREVLSG---SECKKE 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FAA R++HV + +++ ++ DR++ SS YQ + S+ + I+ Sbjct: 56 TLALLFAADRVEHVSEI--EKMLQKSHVVTDRYVYSSIIYQTMQGISKEF----IYSINF 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150 +PD +ILD+ + LKR++ R Sbjct: 110 FAKIPDIVVILDVDTEEALKRMEFR 134 >gi|254457836|ref|ZP_05071263.1| thymidylate kinase [Campylobacterales bacterium GD 1] gi|207085229|gb|EDZ62514.1| thymidylate kinase [Campylobacterales bacterium GD 1] Length = 190 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 13/108 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 ++I+ EGI+ AGK+T I LK +N+ D +T+EPG T + R ++LS Sbjct: 1 MYIAIEGIDTAGKSTQIQKLK-----ENFPDAIITKEPGATAIGKEIREIVLSAKAQ--S 53 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGE 108 +AE ++F A R +H++ V+ P L K+++ DR S AY QGE Sbjct: 54 KKAEFLLFLADRAEHIKEVVEPNL--DKMIISDRSAVSGVAYALIQGE 99 >gi|39998390|ref|NP_954341.1| hypothetical protein GSU3301 [Geobacter sulfurreducens PCA] gi|39985336|gb|AAR36691.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gi|298507331|gb|ADI86054.1| thymidylate kinase, putative [Geobacter sulfurreducens KN400] Length = 211 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 13/174 (7%) Query: 1 MNSGLFISFEGIEGAGKTTH--ISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G I EGI G+G+ I L L YDV P A E LL+ Sbjct: 1 MRKGKLIVIEGISGSGQQVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLNW- 59 Query: 59 VDEFG--AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 FG A+ + +A R + +NV+ PAL + KI+LC + SS A ++H Sbjct: 60 --PFGRTPRADFLFESAVRTEVFKNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFD 117 Query: 116 FLDSLQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 L + +IS E+ PD TI +D+P +R+++ + +DY+ + Sbjct: 118 VLRHIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQIHHEGGIDYYNQ 171 >gi|325958282|ref|YP_004289748.1| Thymidylate kinase [Methanobacterium sp. AL-21] gi|325329714|gb|ADZ08776.1| Thymidylate kinase [Methanobacterium sp. AL-21] Length = 191 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 52/205 (25%), Positives = 96/205 (46%), Gaps = 23/205 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFG 63 ++I EGI+G+GKTT I LL+ ++Q+ DV EP + R +L + ++E Sbjct: 1 MYICLEGIDGSGKTTQIKLLESWIQKCGIDVLRVFEPTDNEVGKLIRKLLQNPDAINENF 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A++FAA R + ++ + KI++ DR SS YQ + + + EI Sbjct: 61 QITLALLFAADRTVLMRDITEAEAL-AKIVISDRSFYSSMVYQNDS--------EWIAEI 111 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD I+LD+ + + R +D FE ++ + ++ +L++A + Sbjct: 112 NKHAKQPDLVILLDINPETAVSRCDG---------MDSFEEQNFLASTAKK--YLELADH 160 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 Q +V++ + V +I IV Sbjct: 161 Q--NFMVVNANNGINKVHDDIKRIV 183 >gi|242309052|ref|ZP_04808207.1| dTMP kinase [Helicobacter pullorum MIT 98-5489] gi|239524476|gb|EEQ64342.1| dTMP kinase [Helicobacter pullorum MIT 98-5489] Length = 189 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 14/185 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ +GK+T I LK LQ + T EPG TP + R +LL + E + Sbjct: 1 MYVVIEGIDTSGKSTQIQELKLALQEAIF----TFEPGATPLGKKLRKILLEDSI-ELDS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A R H +++ K+++ DR L S AY + D L + + Sbjct: 56 RTEMLLFLADRAQHTHEILKAN--PDKLIISDRSLISGMAYAKDFDFET---LKAFNLFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDY---FERKDVMIHEKRRQIFLDI 180 Q ++P I L+L + +R+Q++ + E L+Y +++ I +K + ++ I Sbjct: 111 TQGILPQKVIFLELQKEDLQQRLQSKNEDKIEQRGLEYLLELQQRTKAIIKKLQLPYISI 170 Query: 181 ARNQP 185 N P Sbjct: 171 NANLP 175 >gi|15679753|ref|NP_276871.1| thymidylate kinase [Methanothermobacter thermautotrophicus str. Delta H] gi|6016460|sp|O27793|KTHY_METTH RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|2622895|gb|AAB86231.1| thymidylate kinase [Methanothermobacter thermautotrophicus str. Delta H] Length = 194 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 15/145 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+G+GKTTH +L +L+ Y VH REP + R +L S D Sbjct: 1 MYICFEGIDGSGKTTHAALTASWLRENGYMVHEVREPTDSNIGSLIRSMLSS--PDARTP 58 Query: 65 EAE---AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + A++FAA RL + + I E +++ DR SS YQG + + Sbjct: 59 DVQRMLALLFAADRL-TLRSKIEGDWAE-DVVVSDRCYYSSMVYQGPE--------EWVC 108 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 EI+ PD I+LD+ V++ ++R Sbjct: 109 EINRFAPRPDVVILLDIDVEVAMER 133 >gi|32266861|ref|NP_860893.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449] gi|46576464|sp|Q7VGF9|KTHY_HELHP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|32262913|gb|AAP77959.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449] Length = 195 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 30/199 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63 ++++ EG++ GK+T I LLK + + + T+EPGG+ E R ++L ++G Sbjct: 1 MYVAIEGVDTCGKSTQIQLLKAYYPQAVF----TKEPGGSIIGEHIRDLVL-FAPKKYGF 55 Query: 64 ---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++F A R H V+ P + K+++ DR + S AY D +Q + +L Sbjct: 56 TLDERAELMLFLADRAQHYAQVLLPH--KDKLIISDRSVISGIAYAKSIDIAQSI---AL 110 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR-----------YSLRESACLDYFERKDVMI 169 + ++ ++PD +IL+L +R++++ Y L C K+V+ Sbjct: 111 NDFVLRGMLPDLVVILELDEKSLKERIESKSHDNIESRGISYMLEIQKCF-----KNVVT 165 Query: 170 HEKRRQIFLDIARNQPDRC 188 + I LD +++ C Sbjct: 166 QMNLKYIVLDATQDKERIC 184 >gi|303244545|ref|ZP_07330879.1| thymidylate kinase [Methanothermococcus okinawensis IH1] gi|302485093|gb|EFL48023.1| thymidylate kinase [Methanothermococcus okinawensis IH1] Length = 195 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 31/216 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G+GKTT LL + K T EP + R +L ++ E Sbjct: 5 FIVFEGIDGSGKTTQSKLLAEKINGK-----YTCEPTNGDIGKLIRDILSGKKCEK---E 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FAA R++HV ++ ++ ++CDR++ SS YQ + Q + L+ + I+ Sbjct: 57 TLALLFAADRVEHVVDI--EQHLKKTHIVCDRYVYSSMVYQ----AIQGIDLNFIMNINQ 110 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-- 183 PD I LD+ V+ KR+ + + FE K+++ K R + +I + Sbjct: 111 FAKKPDILIFLDVDVEESFKRMNGKNK-------EIFENKEML--NKVRAKYYEIIKKRL 161 Query: 184 -QPDRCHIV--DSAHSFQSVATNILNIVWELVQKRV 216 +P +I + S + V NIL EL +K + Sbjct: 162 FEPKYGYIKINTTGKSIEEVHDNILT---ELREKNI 194 >gi|189490439|ref|YP_001957008.1| thymidylate kinase [Pseudomonas phage 201phi2-1] gi|164609504|gb|ABY63113.1| thymidylate kinase [Pseudomonas phage 201phi2-1] Length = 357 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 20/175 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPA----AEAARHVLLSCG 58 FI +G + +GK+T L+K FL R + D REPGG P AE R L++ Sbjct: 7 FIVLDGPDFSGKST---LMKAFLARVEAEGIDHVAMREPGGIPGSGSLAEEIRVALIANR 63 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E + ++ A R+ +V+++I PAL + K ++ DRF+ S++ + H +L Sbjct: 64 DERVHPETDVLLHMAYRVQNVKDIILPALADNKWVISDRFVFSTWCLNVQAHLETHPYLT 123 Query: 119 ----SLQEISVQEVMPDCTIILDLPVDIGLKRV------QNRYSLRESACLDYFE 163 L +Q + T ILD P +I +R ++RY + +A D E Sbjct: 124 DMLYGLMPYVLQGLPEPLTFILDTPREIRDQRANSDERKKDRYESQPAAVHDRIE 178 >gi|283954334|ref|ZP_06371855.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414] gi|283794133|gb|EFC32881.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414] Length = 191 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 10/132 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+ GK+T ISLLK+ + D T EPGGT + R +LL+ Sbjct: 1 MYIVFEGIDCVGKSTQISLLKKIYK----DAVFTLEPGGTELGKHLREILLNKTY-PINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A R H E V++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RTELLLFLADRAQHFEEVLKDN--QNKLIISDRSFISGMAYAKDFEND---LLFTLNSFA 110 Query: 125 VQEVMPDCTIIL 136 + P I L Sbjct: 111 LDNFFPQKVIFL 122 >gi|78224441|ref|YP_386188.1| thymidylate kinase [Geobacter metallireducens GS-15] gi|78195696|gb|ABB33463.1| thymidylate kinase [Geobacter metallireducens GS-15] Length = 211 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 13/174 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISL--LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G I EGI G+G+ ++ L + L YDV P A E LL+ Sbjct: 1 MRKGKLIVIEGISGSGQQVKAAIVGLHKALTGMKYDVVECANPDSGRAKELGIDNLLNW- 59 Query: 59 VDEFG--AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 FG A+ + AA R + +N++ PAL + KI+LC + SS A ++H Sbjct: 60 --PFGRTPRADFMFEAAVRTEVFKNIVEPALQDDKIVLCKQSSISSLANAWVSGYTKHFD 117 Query: 116 FLDSLQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 L ++++S E+ PD T+ +D+P +R+++ + ++Y+E+ Sbjct: 118 VLRHIEKLSRGFLFEDEIYPDLTLFIDVPAQEAFERIEDVLQIHHEGGIEYYEK 171 >gi|152992943|ref|YP_001358664.1| thymidylate kinase [Sulfurovum sp. NBC37-1] gi|254808312|sp|A6Q9Z8|KTHY_SULNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|151424804|dbj|BAF72307.1| thymidylate kinase [Sulfurovum sp. NBC37-1] Length = 191 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 14/135 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+ GK+T + LL + K+ + T EPGGT + AR +LLS + Sbjct: 1 MYILFEGIDTCGKSTQMELLTQ----KHPGIITTHEPGGTAFGQQAREILLSDSLR--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSLQ 121 AE ++F A R +H E V+ P KI++ DR S Y G+ D + L +L Sbjct: 55 RAELLLFLADRAEHYEEVVEPN--HDKIVVSDRGFVSGIGYALANGDFDFDE---LVALN 109 Query: 122 EISVQEVMPDCTIIL 136 ++++ PD I+ Sbjct: 110 RFALKDHFPDRIILF 124 >gi|15921837|ref|NP_377506.1| thymidylate kinase [Sulfolobus tokodaii str. 7] gi|23821798|sp|Q970Q8|KTHY2_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|15622624|dbj|BAB66615.1| 213aa long hypothetical thymidylate kinase [Sulfolobus tokodaii str. 7] Length = 213 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 16/149 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLS 56 M G+ I+FEGI+G+GK++ +LLK +++ K DV++T EA + LL+ Sbjct: 1 MKKGVLIAFEGIDGSGKSSQATLLKDWIELKR-DVYLTEWNSSDWIHDIIKEAKKKDLLT 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +++ A D E I P L G I++ DR++ ++YA RDS + + Sbjct: 60 -------PLTFSLIHATDFSDRYERYILPMLKSGFIVISDRYIYTAYA----RDSVRGVD 108 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLK 145 +D ++++ + PD T + + DI L+ Sbjct: 109 IDWVKKLYSFAIKPDITFYIRVSPDIALE 137 >gi|328948690|ref|YP_004366027.1| thymidylate kinase [Treponema succinifaciens DSM 2489] gi|328449014|gb|AEB14730.1| Thymidylate kinase [Treponema succinifaciens DSM 2489] Length = 214 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 53/174 (30%), Positives = 82/174 (47%), Gaps = 30/174 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+GAG TT + +LK + + T EP + + R +L G + E Sbjct: 6 FIVFEGIDGAGTTTQLEILK----SRTPEFLFTAEPTSSETGKFLRKMLK--GEIQVTNE 59 Query: 66 AEAIVFAAARLDHV-------ENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 A +FAA R +H+ EN I+ A +GKI++ DR+L SS AYQ Sbjct: 60 TAAYIFAADRNEHINGNCIIEENKLITGIKSACEKGKIVVSDRYLFSSLAYQS------- 112 Query: 115 LFLDSLQEI--SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 +D EI ++ + +P D+ +I LKR+ +R +D+ +R Sbjct: 113 --IDCSPEIPRTLNKFFPLPRLLFFFDIEPEISLKRISSRGQKEIYEKIDFLKR 164 >gi|116623132|ref|YP_825288.1| thymidylate kinase/thymidylate synthase [Candidatus Solibacter usitatus Ellin6076] gi|116226294|gb|ABJ85003.1| thymidylate kinase / thymidylate synthase [Candidatus Solibacter usitatus Ellin6076] Length = 259 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 13/147 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT---PAAEAARHVLLSCGVD 60 GL I+FEG +G+GKTT L K +L+ + ++V T+ P + AR S + Sbjct: 29 GLLIAFEGPDGSGKTTQRKLFKNWLKSEGHEVVTTKWNSSALIKPLVK-ARKAARSLSPE 87 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EF +++ AA +E I PAL +G++++ DR+L ++ A RD+++ + L L Sbjct: 88 EF-----SLLHAADFRYRLETEILPALWQGQVVVADRYLFTALA----RDAARGMDLHWL 138 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRV 147 E+ PD + + KR+ Sbjct: 139 LEVYRPLFWPDLVFYFSVSPETSGKRI 165 >gi|45658645|ref|YP_002731.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|294827736|ref|NP_710987.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601] gi|59798325|sp|Q72NL9|KTHY_LEPIC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920823|sp|Q8F7Y6|KTHY_LEPIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|45601889|gb|AAS71368.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293385579|gb|AAN48005.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601] Length = 204 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 4/151 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+ FEGI+G+GK+T L L EP + R L G E G Sbjct: 7 IFVVFEGIDGSGKSTLCKSLTEKLIELGIPSAAFTEPTNLETGKYLRKFLR--GEIELGK 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + F R + ++ I PAL K +L DR++ S+ AYQ D S + L + ++ Sbjct: 65 EEQIEAFLNDREESLKQNILPALNSDKNVLLDRYMYSTAAYQSGDDLSPEMILK--KNLN 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 +PD LDL I L+R+ R +E Sbjct: 123 RNFKIPDLLFYLDLSPSIALERLNRRKEGKE 153 >gi|330835060|ref|YP_004409788.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4] gi|329567199|gb|AEB95304.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4] Length = 209 Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 36/221 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-----GTPAAEAARHVLLSCG 58 G+ I+ EG EG+G+T H++ LK FL+ + Y V +T G G P A R ++ Sbjct: 3 GMIIALEGAEGSGRTFHVNSLKSFLEEEGYGV-ITFGLGLSKLMGEPIARKKRDIV---- 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 F + + D VENV++P+L G + + D ++ + A+ R L+ Sbjct: 58 ---FQRRTLFLAYVTDLADQVENVVKPSLKAGFVAIADGYVSTLMAWGMTRG------LE 108 Query: 119 SLQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERK-DVMIH---- 170 V +P + L L P +I ++R+ LR+ LD F DV I+ Sbjct: 109 PSWMKEVLNALPKSNLSLGLVSSPDEI-MRRI-----LRKKGTLDPFSSGIDVCINGELF 162 Query: 171 EKRRQIFLDIARNQPDRCH---IVDSAHSFQSVATNILNIV 208 RQ + N + IVD+ SF+ V I IV Sbjct: 163 SSYRQYLENFQTNLIEVMKDGTIVDTGRSFEVVKDEIAKIV 203 >gi|167957240|ref|ZP_02544314.1| thymidylate kinase [candidate division TM7 single-cell isolate TM7c] Length = 208 Score = 58.9 bits (141), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 13/167 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G +I EG +G GK+T I LLK+FL +K + EPG T R ++ + + Sbjct: 3 GKYIVIEGSDGTGKSTQIDLLKKFLNKKGFISKTIHEPGETAIGIELRKIIKNKNLPR-S 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F AAR + + +I L +G+ ++ R S+ YQG + + ++ +++I Sbjct: 62 ARTNLLLFTAARCE-LAPIIENHLNKGEWVISSRNWLSTVVYQG---YGEGIDINEIKQI 117 Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + + D T++L D R+ NR + + D FE K Sbjct: 118 TALFTNKSYLQTDLTLVLYANTDTLRSRIINR---NDKSYRDTFESK 161 >gi|222100442|ref|YP_002535010.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359] gi|221572832|gb|ACM23644.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359] Length = 143 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 12/136 (8%) Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A+R VE+ I+ L G ++ DR++DSS AYQG ++ L + Sbjct: 4 KAELLLFLASRNLLVED-IKHYLFRGYFVVLDRYVDSSVAYQGFGRGLGKEVVEKLNAFA 62 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ L+R L+ FE+++ + E+ R+ +L +A Sbjct: 63 TDGLIPDVTFYIDIDVETALRR---------KGELNRFEKREFL--ERVRKGYLLLAEEH 111 Query: 185 PDRCHIVDSAHSFQSV 200 P+R I+D + + + Sbjct: 112 PERIVILDGNRTVEEI 127 >gi|111222127|ref|YP_712921.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a] gi|111149659|emb|CAJ61352.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a] Length = 222 Score = 58.5 bits (140), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLF+S +G G GK+T ++ + L+ + +H T EP +P L+ + Sbjct: 1 MRPGLFVSVDGPGGVGKSTTLATVTEILRDQKVPIHATTEPSRSPIGN-----LIRASTN 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A A + A R HV I P L G +++ DR++ SS Q + + ++ Sbjct: 56 SHRGLALAHLVAGDRHHHVTTEIIPRLDAGDVVVSDRYIPSSLVLQ----RFDAITIPTI 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 EI+ + PD +IL + R + R FER Sbjct: 112 LEINAGLLQPDLAVIL----TAAPTAIAARMAARGGVTNSRFER 151 >gi|320012975|gb|ADW07824.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331] Length = 217 Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ +G G GK+T I L + L + VH T EP ++ R + Sbjct: 6 GMFITIDGPSGVGKSTTIRALHQELTARGIPVHRTAEPT---TSDLGR--FIRAHFSHIR 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A + AA R +HV IRP L G ++ DR+L S+ Q LD + Sbjct: 61 GHALACLVAADRYEHVAQEIRPRLSAGDTVISDRYLASTLVMQQLDGVPLKFLLD----L 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +MPD +IL + R+ +NR+ L +A ++V++++ Q + Sbjct: 117 NANVLMPDLAVILTAAPALIADRISARGPRNRFHLDPTA-----PGREVLLYKAAAQTLM 171 >gi|15898046|ref|NP_342651.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2] gi|284175899|ref|ZP_06389868.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus 98/2] gi|14285510|sp|P58157|KTHY2_SULSO RecName: Full=Probable thymidylate kinase 2; AltName: Full=dTMP kinase 2 gi|13814387|gb|AAK41441.1| Thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2] gi|261602758|gb|ACX92361.1| thymidylate kinase [Sulfolobus solfataricus 98/2] Length = 213 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 16/150 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCGV 59 GL I+FEGI+G+GK++ LLK +++ + DV++T EA + +L+ Sbjct: 3 GLLIAFEGIDGSGKSSQAVLLKDWIEMRR-DVYLTEWNSSEWIHDIIKEAKKKNMLT--- 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +++ A D E I P L G +++CDR++ ++YA RD +++ D Sbjct: 59 ----SITFSLIHATDFSDRYERYILPMLKSGFVVICDRYVYTAYA----RDVVRNVDFDW 110 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 ++ + + P+ T + + +I L+R++ Sbjct: 111 VKRLYSFAIKPNFTFYIRVTPEIALERIRK 140 >gi|38233300|ref|NP_939067.1| thymidylate kinase [Corynebacterium diphtheriae NCTC 13129] gi|38199559|emb|CAE49210.1| Putative thymidylate kinase [Corynebacterium diphtheriae] Length = 205 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 10/184 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63 + I+ EGI+GAGK T +S +K +R + DV R A A R + S G Sbjct: 1 MIIAIEGIDGAGKNTLVSAIK---ERFDADVIGFPRYEQSIHAKLAQRALYGSMGDLTDS 57 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A A +FA R D + V+ + K++L DR++ S+ AY R + + + +QE+ Sbjct: 58 AYAMATLFALDRYD-AKAVLGRYVGTSKVVLLDRYVASNAAYSAARTRNDAM-VQWVQEL 115 Query: 124 SVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E+ +PD I+L ++ +R Q R + S LD +E +D + E+ Q + + Sbjct: 116 EFEELGLPVPDIHILLHTSPELAAQRAQRREATDASRKLDRYE-EDAGLQERTFQAYESL 174 Query: 181 ARNQ 184 A+ + Sbjct: 175 AQQK 178 >gi|315452626|ref|YP_004072896.1| thymidylate kinase [Helicobacter felis ATCC 49179] gi|315131678|emb|CBY82306.1| thymidylate kinase [Helicobacter felis ATCC 49179] Length = 190 Score = 58.2 bits (139), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 13/146 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEG++ +GK+T I+LLK + + + EPGGT E R L F A Sbjct: 1 MWIVFEGVDTSGKSTQINLLKPLFPKAIFSL----EPGGTALGEHLRQAALH---GAFCA 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + ++F A R H+E VI+P K++ DR L S AY +H + L Sbjct: 54 QTQFLLFLADRALHLEEVIKPN--AHKLIFSDRSLVSGLAYSSY--GLEHAW--ELHRAH 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR 150 +V+PD ++ L R+Q + Sbjct: 108 GLDVLPDMVLLFKLNAHTLEMRLQAK 133 >gi|257459649|ref|ZP_05624758.1| thymidylate kinase [Campylobacter gracilis RM3268] gi|257443074|gb|EEV18208.1| thymidylate kinase [Campylobacter gracilis RM3268] Length = 208 Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 27/183 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-------- 56 +++ FEGI+G GK+T I+ L + VT+EPGGT EA R ++L Sbjct: 1 MYVIFEGIDGVGKSTQIARLAAAFPQ----AIVTKEPGGTKLGEAVRSLVLGEDFKWRRG 56 Query: 57 -------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 CG E AE ++F A R +H E VI+ G ++L DR S AY Sbjct: 57 SVNLREVCG--EISKRAELLLFLADRAEHYERVIKGG--AGGLVLSDRGFISGLAYALAN 112 Query: 110 DSSQHLF-LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS--LRESACLDYFER-K 165 D + L +L + ++ D ++ + R++ R S + E+ L Y R + Sbjct: 113 DEGADISELIALNKFALGGKFADKIVLFSADEQLIRHRLKTRASSDIIEARGLKYLMRVQ 172 Query: 166 DVM 168 D+M Sbjct: 173 DLM 175 >gi|164688846|ref|ZP_02212874.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM 16795] gi|164602050|gb|EDQ95515.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM 16795] Length = 224 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 15/159 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T L L+ +NY + P + A + L +FG Sbjct: 3 GKLIIIEGSDGSGKATQTKKLYDRLEAENYKIKKVEFPNYNSESSALVKMYLRG---DFG 59 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114 A + +A R + G I++CDR+ S+ +Q + +S + Sbjct: 60 KNATDVDPYVCSTFYAVDRYASFKTGWEEFYNNGGIIICDRYTTSNMVHQASKIDESERD 119 Query: 115 LFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNR 150 +LD L E ++ ++ PDC I LD+PV++ +Q+R Sbjct: 120 KYLDWLNDLEFNLYKIPKPDCVIFLDVPVEVSKSLMQDR 158 >gi|185177554|pdb|2PLR|A Chain A, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus Tokodaii Strain7 gi|185177555|pdb|2PLR|B Chain B, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus Tokodaii Strain7 Length = 213 Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/148 (28%), Positives = 76/148 (51%), Gaps = 16/148 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSC 57 G+ I+FEGI+G+GK++ +LLK +++ K DV++T EA + LL+ Sbjct: 2 KKGVLIAFEGIDGSGKSSQATLLKDWIELKR-DVYLTEWNSSDWIHDIIKEAKKKDLLT- 59 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +++ A D E I P L G I++ DR++ ++YA RDS + + + Sbjct: 60 ------PLTFSLIHATDFSDRYERYILPXLKSGFIVISDRYIYTAYA----RDSVRGVDI 109 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLK 145 D ++++ + PD T + + DI L+ Sbjct: 110 DWVKKLYSFAIKPDITFYIRVSPDIALE 137 >gi|222445925|ref|ZP_03608440.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii DSM 2375] gi|222435490|gb|EEE42655.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii DSM 2375] Length = 192 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62 ++I FEGI+GAGK+T I+LLK +L++ +DV EP + + R +L D Sbjct: 1 MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ 106 + ++FAA R+ +I L + K++L DR SS AYQ Sbjct: 61 -QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ 99 >gi|261349531|ref|ZP_05974948.1| dTMP kinase [Methanobrevibacter smithii DSM 2374] gi|288861895|gb|EFC94193.1| dTMP kinase [Methanobrevibacter smithii DSM 2374] Length = 192 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 9/105 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62 ++I FEGI+GAGK+T I+LLK +L++ +DV EP + + R +L D Sbjct: 1 MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ 106 + ++FAA R+ +I L + K++L DR SS AYQ Sbjct: 61 -QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ 99 >gi|223996301|ref|XP_002287824.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976940|gb|EED95267.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 276 Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 20/222 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++ GKTT +SLL + L + R P + + + L+ Sbjct: 36 GAFILLEGVDRCGKTTQVSLLVKHLLSLSLATVAYRFPDRSTQVGSLINSYLTSSTPTAP 95 Query: 64 AEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERD----SSQH 114 + AI +F+A R + ++ R L G ++CDR+ S A+ E D S Sbjct: 96 LDDRAIHLLFSANRWEASTSLAR-TLASGTNIVCDRYAYSGVAFTSAKVEEDRGSMSGGE 154 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L L+ V PDC I LDL D KR Y + +E++D+ + ++R Sbjct: 155 LGLEWCIAPDVGLPAPDCVIFLDLEQDEAEKR--GGYG------GERYEKRDLQMRVRKR 206 Query: 175 QIFLDIARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQK 214 L Q R H+VD++ S + V +++IV + +++ Sbjct: 207 FAELQSLDEQNGRVPWHVVDASQSIEEVTGELVSIVNDTIER 248 >gi|291533518|emb|CBL06631.1| thymidylate kinase [Megamonas hypermegale ART12/1] Length = 224 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 10/160 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LS 56 M G I E +G GK T LL L + Y V P +PA + L Sbjct: 1 MVKGKLIIIEAGDGCGKATQTKLLYDRLNQAGYKVKKVEYPDYESPACTPVKMYLQGEFG 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQ 113 VD+ A A +++FA R + EG I+L DR+ S+ +Q E + Sbjct: 61 GHVDDVNAYAASVLFAVDRYASYRMKWKKDYEEGTIILADRYTTSNMVHQAVKIEDSKMR 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 FL L + ++ +PD I L++P DI K + NR Sbjct: 121 DEFLSWLWDTEFTKMGLPVPDKVIFLNMPPDISNKLIDNR 160 >gi|222823749|ref|YP_002575323.1| thymidylate kinase [Campylobacter lari RM2100] gi|254808285|sp|B9KG87|KTHY_CAMLR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|222538971|gb|ACM64072.1| thymidylate kinase [Campylobacter lari RM2100] Length = 194 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 8/114 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+FEG++ GK+T I LLK+ + D T+EPGG+ R +LL + +F Sbjct: 1 MYIAFEGVDCVGKSTQIELLKKCFK----DAIFTKEPGGSELGVHLRKILLESKM-QFSK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +AE ++F A R + ++ I + K+++ DR S+ AY + D Q++ D Sbjct: 56 KAELLLFLADRANLID--IHLVQNKNKLIISDRSFVSNMAY-AKFDFDQNILFD 106 >gi|148642580|ref|YP_001273093.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061] gi|166987705|sp|A5UKJ7|KTHY_METS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|148551597|gb|ABQ86725.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061] Length = 192 Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 9/105 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62 ++I FEGI+GAGK+T I+LLK +L + +DV EP + + R +L D Sbjct: 1 MYIVFEGIDGAGKSTQINLLKDWLDQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ 106 + ++FAA R+ +I L + K++L DR SS AYQ Sbjct: 61 -QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ 99 >gi|255527280|ref|ZP_05394160.1| conserved hypothetical protein [Clostridium carboxidivorans P7] gi|296188361|ref|ZP_06856753.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7] gi|255509018|gb|EET85378.1| conserved hypothetical protein [Clostridium carboxidivorans P7] gi|296047487|gb|EFG86929.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7] Length = 241 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 16/163 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+ I EG +G+GK T +L L +NY V P + A + L+ Sbjct: 1 MNRGIVIVVEGCDGSGKATQTQILYEKLLSENYKVKKIEYPNYKSDSSALVKMYLN---G 57 Query: 61 EFGAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS- 112 +FG+ E + +A R + + G I+L DR+ ++ +Q + + Sbjct: 58 DFGSNPEDVNPYVSSTFYAVDRFASYKTEWKDFYESGGIVLADRYTTANMVHQASKIKNV 117 Query: 113 --QHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 + FLD L + + +PDC + LD+P + K ++ R Sbjct: 118 QEKSKFLDWLWDFEFRIFGLPVPDCVMFLDMPPEYSRKLMKER 160 >gi|315638103|ref|ZP_07893288.1| thymidylate kinase [Campylobacter upsaliensis JV21] gi|315481951|gb|EFU72570.1| thymidylate kinase [Campylobacter upsaliensis JV21] Length = 193 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 10/132 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ GK+T I LLK + D T EPG T E R +LL+ + Sbjct: 1 MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEHLRELLLNRPY-PISS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R H E ++R E K+++ DR + S AY D L SL + + Sbjct: 56 KAELLLFLADRNQHYEEILREN--EQKLIISDRSIISGMAYAKNFDLD---ILFSLNDFA 110 Query: 125 VQEVMPDCTIIL 136 + P I L Sbjct: 111 LNGFFPQKAIFL 122 >gi|296122456|ref|YP_003630234.1| thymidylate kinase [Planctomyces limnophilus DSM 3776] gi|296014796|gb|ADG68035.1| thymidylate kinase [Planctomyces limnophilus DSM 3776] Length = 236 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 12/146 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SGL I EGI+GAGK T LL L+ + DV P R G Sbjct: 10 SSGLLIVIEGIDGAGKGTQTKLLHERLKSTSRDVFTLSFPRYESTFFGQRVADFLNG--R 67 Query: 62 FGAEAEAIVFAAARL---DHVE--NVIRPALMEGKILLCDRFLDSSYAY-----QGERDS 111 FG + F AA L D E ++++ AL EGKI+LCDR++ S+ A+ Q E + Sbjct: 68 FGTLEQVHPFLAAMLYAGDRFESRDLLQSALNEGKIVLCDRYIPSNLAHQLTKAQPELRA 127 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILD 137 +++ ++ Q PD ++LD Sbjct: 128 EMQQWIEHVEYHLYQMPRPDLVVLLD 153 >gi|320537300|ref|ZP_08037256.1| thymidylate kinase [Treponema phagedenis F0421] gi|320145870|gb|EFW37530.1| thymidylate kinase [Treponema phagedenis F0421] Length = 214 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 27/217 (12%) Query: 6 FISFEGIEGAGKTTHISLLK-RFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI FEGI+G G T+ + LL+ RF K V T+EP T + R L E Sbjct: 11 FIVFEGIDGTGTTSQLRLLRERFASIGKAEKVVFTQEPTDTEIGKLIRKAL----SKELS 66 Query: 64 AEAEAI--VFAAARLDHVENVIRPALME----GKILLCDRFLDSSYAYQGERDSSQHLFL 117 E + I +FAA R +H+ ++E GK + DR+ SS AYQG S Sbjct: 67 LEQKTIAQLFAADRTEHIYG--NAGIIEHTANGKAVFSDRYFFSSLAYQGL--SVGKSLA 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--VMIHEKRRQ 175 L E +P+ D+PV + R+ R +E +E+KD + ++ + Sbjct: 123 KKLNE---DFPLPELLFFFDIPVQTSMSRIDKRGLQKE-----IYEKKDFQTAVRQEYLR 174 Query: 176 IFLDIARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211 I + ++ P+ I +D+ Q + I + V L Sbjct: 175 IIEEYEKSAPEMQIIRIDAEKDIQEIHQKIWSFVENL 211 >gi|242238410|ref|YP_002986591.1| thymidylate kinase [Dickeya dadantii Ech703] gi|242130467|gb|ACS84769.1| thymidylate kinase [Dickeya dadantii Ech703] Length = 223 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 34/166 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT------PAAEAA----- 50 N G FI+FEG +GAGK+T + R YD VT P T P E+ Sbjct: 3 NKGFFIAFEGNDGAGKST--------VSRDIYDSIVTIYPNTTFLDKNHPVLESGYGMYH 54 Query: 51 ----RHVL----LSCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLD 100 R +L +S +DE G ++ ++ A LD+ +I+PAL EGKI++ D + Sbjct: 55 MGKIREILWDYDISAPLDELGDSHWLLLLSSWFAALDY--GIIKPALNEGKIIISDGWF- 111 Query: 101 SSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y Y + + E+ PD TI LD+ + R Sbjct: 112 --YKYIARFSLKNDIMRNIANEVFNLSTEPDLTIYLDVTPRVAATR 155 >gi|327353237|gb|EGE82094.1| thymidylate kinase [Ajellomyces dermatitidis ATCC 18188] Length = 225 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 16/205 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ AGK+T ++L++ LQ ++V R P T + L G Sbjct: 5 GGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTHL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++F+A R + I+ + G ++ DR+ S Y +D + L LD + Sbjct: 64 DDHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKDIPE-LSLDWAWQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-I 180 + PD + L++ + KR Y L ER + + R RQ+F I Sbjct: 122 PEIGLPQPDIWLFLNISPEEAAKR--GGYGL---------ERYENDTFQSRIRQLFQTLI 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 AR PD HI+D+ + + VA +++ Sbjct: 171 AREDPDNVHIIDAGRTEREVALDVI 195 >gi|307150937|ref|YP_003886321.1| thymidylate kinase [Cyanothece sp. PCC 7822] gi|306981165|gb|ADN13046.1| thymidylate kinase [Cyanothece sp. PCC 7822] Length = 207 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 83/177 (46%), Gaps = 18/177 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG----GTPAAEAARHVLLS 56 MN LFI EGI+G+G +T +LLK + +K ++ EP G EA + ++ Sbjct: 1 MNK-LFIVLEGIDGSGTSTQATLLKDYFIQKGDKAVISPEPTNGVIGKMIREAMQKPIIL 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + + A +FAA R H+ N + + +G L+ R+ SS AY + Sbjct: 60 MEDKQSFDQQMAYLFAADRHYHLYNDLDGVFKLIQDGSHLITTRYYFSSLAYNC-HTPEE 118 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 F+ L E + PD I +D+PV++ L+R+Q R +D +E + +I Sbjct: 119 FKFVRQLNE---RFPNPDLVIYIDIPVEVSLERLQER------TIIDVYENSEKLIQ 166 >gi|82492135|gb|ABB77932.1| thymidylate kinase [Environmental halophage 1 AAJ-2005] Length = 192 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 24/196 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++ +GKTT L+ Y TREP T V S + Sbjct: 1 MLVTLEGLDESGKTTVTEALRSQFPDATY----TREPTETWNGSV---VNKSVETEHEEP 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHL--FLDSL 120 AE ++ A H+ IRPAL +GK+++ DR+ DS AYQG D H ++ + Sbjct: 54 VAELFMYTADHATHLSETIRPALNQGKLVISDRYTDSRCAYQGATLEDEFAHPMEYIRGI 113 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E PD T+ LD+ + R + + + L K R+ + + Sbjct: 114 HGEFTRE--PDLTLYLDIDAETAASREKAAKGVDRTEYLS-----------KVRENYERL 160 Query: 181 ARNQPDRCHIVDSAHS 196 PDR +D+ S Sbjct: 161 IATHPDRFVRIDATQS 176 >gi|146304784|ref|YP_001192100.1| thymidylate kinase [Metallosphaera sedula DSM 5348] gi|172046954|sp|A4YIC4|KTHY_METS5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|145703034|gb|ABP96176.1| thymidylate kinase [Metallosphaera sedula DSM 5348] Length = 196 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 34/220 (15%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + EGI+ +GKTT L L + + V +T+EP + V Sbjct: 3 LVVIEGIDASGKTTLAKRLAESLSPR-FKVLLTQEPFTDDIKQLLEKYQWKDQV------ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGK---ILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A++F+A R HV+ ME + +++ DR+ S+ AYQG +L+SL Sbjct: 56 LLALLFSADRRIHVK------WMESQNVDLIISDRYFFSTLAYQGV--GVDRTWLESLSS 107 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I +P+ TI+LD+PV++ L+R++N+ R+S LD FE K +H+ R +L +AR Sbjct: 108 IFP---LPNLTILLDVPVNVALERLRNK---RDS--LD-FEEKRKSLHQVREN-YLSLAR 157 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 I+D + + + I ELVQ +S +S+ Sbjct: 158 RY--NFKILDGTLPLEKLTS----ISLELVQGLLSSSTSR 191 >gi|253988332|ref|YP_003039688.1| thymidylate kinase-like protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779782|emb|CAQ82943.1| similarities with thymidylate kinase [Photorhabdus asymbiotica] Length = 223 Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 45/215 (20%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAARH-- 52 GLFI+FEG +GAGK+T + R+ YD V + + P+ + H Sbjct: 5 GLFIAFEGNDGAGKST--------ISREVYDILSLDYNNIVFLDKNYPLLPSGYSMYHMG 56 Query: 53 ----VL----LSCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSS 102 VL +S + E G ++ A+ A LD + +I+P+L++GKI++CD + Sbjct: 57 KIRDVLWDYDISAPLGELGDRHWILLIASWFAVLDSL--IIQPSLLQGKIIICDSWYYKY 114 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 A + + +S+ I+ + PD I LD+P DI KR + ES L+ Sbjct: 115 LARFLLKSTELAELSNSVLSINTK---PDMVIYLDVPPDIAEKR-KKMLKPSESGKLEKN 170 Query: 163 ERKDVMIHEK----RRQIFLDIARNQPDRCHIVDS 193 E+ D + ++K + Q F D D I+D+ Sbjct: 171 EKYDFIEYQKHVLNQYQTFYD------DTWKIIDT 199 >gi|57506107|ref|ZP_00372029.1| thymidylate kinase [Campylobacter upsaliensis RM3195] gi|57015591|gb|EAL52383.1| thymidylate kinase [Campylobacter upsaliensis RM3195] Length = 193 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 10/132 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ GK+T I LLK + D T EPG T E R +LL+ + Sbjct: 1 MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEYLRELLLNRPY-PISS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R H E ++R E K+++ DR + S AY D L +L + + Sbjct: 56 KAELLLFLADRNQHYEEILREN--EQKLIISDRSIISGMAYAKNFDLD---ILFTLNDFA 110 Query: 125 VQEVMPDCTIIL 136 + P I L Sbjct: 111 LNGFFPQKAIFL 122 >gi|160933042|ref|ZP_02080431.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753] gi|156868116|gb|EDO61488.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753] Length = 222 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 73/164 (44%), Gaps = 15/164 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++G+GK T LL ++L+ + V P + A + L+ Sbjct: 1 MARGKLIVMEGLDGSGKATQTGLLCQYLESRGRRVRHIEFPDYREPSSALVKMYLN---K 57 Query: 61 EFG-------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109 EFG A A + +A R R + G ++ DR+ S+ YQ E+ Sbjct: 58 EFGSNPGDVNAYAASSFYAVDRYASFLRFWRKDYLSGATIVADRYTTSNAVYQMEKTPRE 117 Query: 110 DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D +++L +L + +Q PD + LD+P +I + + RY+ Sbjct: 118 DWNKYLAWLQDYEYGKLQLPRPDLVLFLDMPTEISQRLLSGRYA 161 >gi|124027289|ref|YP_001012609.1| thymidylate kinase [Hyperthermus butylicus DSM 5456] gi|123977983|gb|ABM80264.1| Thymidylate kinase [Hyperthermus butylicus DSM 5456] Length = 223 Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 13/160 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +++ FEGI+GAG TTH LL L+ Y V + EP RH+L Sbjct: 1 MARPVYVVFEGIDGAGTTTHARLLAEKLRLLGYCVELVEEPSKDVVGGVIRHMLRH---G 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPAL---MEGK--ILLCDRFLDSSYAYQGERDSSQHL 115 F + A++FAA RL +++ +L ++G+ I++ DR SS AYQ + Sbjct: 58 PFHQDVLALLFAADRL-----LLQRSLEERLQGRSCIVVSDRSWISSLAYQTCELFPYAV 112 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 D + ++ PD + +D+ I +R+ +R +RE Sbjct: 113 DADWVYIVNKYAWRPDILVYIDVEPLIAFRRLASRGRVRE 152 >gi|302530810|ref|ZP_07283152.1| predicted protein [Streptomyces sp. AA4] gi|302439705|gb|EFL11521.1| predicted protein [Streptomyces sp. AA4] Length = 716 Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 10/138 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I+ EG + L R+L V +T +P A R L Sbjct: 475 NGFLIAIEGTTAVNTAEQAARLARWLGTGTRPVVLTADP----ALGEQRFRTLVSDAALT 530 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS---SYAYQGERDSSQHLFLDS 119 G A+A+V AA R + VE I+PAL G +++ +RF+DS S + GE D + L+ Sbjct: 531 GVRAQALVAAAVRAELVERQIQPALDAGSVVVMERFVDSPLASLSAAGELDRDE---LEG 587 Query: 120 LQEISVQEVMPDCTIILD 137 L + + + PD T++LD Sbjct: 588 LVDWATGRLRPDLTVLLD 605 >gi|70606679|ref|YP_255549.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] gi|76363220|sp|Q4JAC4|KTHY_SULAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|68567327|gb|AAY80256.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] Length = 194 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 32/216 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK---NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ISFEGI+G+GKTT ++ L + N + +T EP + ++E Sbjct: 2 FIISFEGIDGSGKTTISKIIYEKLLIEIGSNKKIILTSEPFSQEIIKL---------IEE 52 Query: 62 FGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G + + A++F A R H+ + + +I++ DR++DS+ AYQ SS + + Sbjct: 53 IGWKDPISLALLFTADRAYHLNLLFK---QNPEIIIMDRYIDSTIAYQ----SSLGIDEN 105 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIF 177 ++ ++ PD TI+LDL + + R++N+ +D F + + K R+ + Sbjct: 106 WIRNLNKYFPEPDLTILLDLKPETAIARIKNK--------VDKFNFDEKISTLSKVREKY 157 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 L++A+ ++ IV++ S + +IV+ + Sbjct: 158 LELAKRN-NKIRIVNAEKSIDEIVEETWSIVYSFLN 192 >gi|305432214|ref|ZP_07401378.1| thymidylate kinase [Campylobacter coli JV20] gi|304444757|gb|EFM37406.1| thymidylate kinase [Campylobacter coli JV20] Length = 192 Score = 55.1 bits (131), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEG++ GK+T ISLLK + + T EPGGT R +LL + Sbjct: 1 MYVVFEGVDCVGKSTQISLLKECFKEAVF----TAEPGGTKLGNHLRELLLYKPY-QLDK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E ++F A R H E +++ + K+++ DR S AY + ++ + L L + Sbjct: 56 KTELLLFLADRAQHCEEILKAN--QDKLIISDRSFISGMAYAKDFENEE---LFRLNAFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYF 162 ++ P I L ++ +R+ Q E +DYF Sbjct: 111 LENFFPQKVIFLKGDENLIKERLSQKEQDAIEKRGIDYF 149 >gi|229578187|ref|YP_002836585.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|229583122|ref|YP_002841521.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] gi|228008901|gb|ACP44663.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|228013838|gb|ACP49599.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] Length = 213 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/142 (23%), Positives = 74/142 (52%), Gaps = 8/142 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL I+FEGI+G+GK++H LLK +++ + DV++T + + + + Sbjct: 3 GLLIAFEGIDGSGKSSHAVLLKDWIEMRR-DVYLTEWNSSDWIHDIIKE---AKKKNTLT 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ A D E I P L G +++CDR++ ++YA RD +++ + ++++ Sbjct: 59 PTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKKL 114 Query: 124 SVQEVMPDCTIILDLPVDIGLK 145 + P+ T + + ++ L+ Sbjct: 115 YSFAIKPNFTFYIRVTPEVALE 136 >gi|269962033|ref|ZP_06176387.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833117|gb|EEZ87222.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 127 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 7/123 (5%) Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 +I+PAL + ++ DR SS AYQG + +L++ ++ E P T+ +D+ Sbjct: 1 MIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDTTLGEFKPAFTLYMDIDPR 60 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201 +GL+R + R LD E+ D+ E+ R+ +L +A N D ++++ S + VA Sbjct: 61 VGLERARGR------GELDRIEKMDISFFERTRERYLALA-NADDSIVVINAEQSIEEVA 113 Query: 202 TNI 204 +I Sbjct: 114 QDI 116 >gi|39939038|ref|NP_950804.1| hypothetical protein PAM_552 [Onion yellows phytoplasma OY-M] gi|39722147|dbj|BAD04637.1| hypothetical protein [Onion yellows phytoplasma OY-M] Length = 138 Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 74/136 (54%), Gaps = 13/136 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKTT I +++ L+++ +V + G + + R + L+ A+ Sbjct: 3 LIVFEGLDGSGKTTLIQKVRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT------NAQ 56 Query: 66 AEAI---VFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSL 120 + + + + A + + E I+P L KI+L DR+L S++AYQ R+ ++ L +L Sbjct: 57 LKPLTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNYQLFNL 116 Query: 121 QEISVQEVMPDCTIIL 136 ++ Q + PD T+ + Sbjct: 117 --LNKQFIKPDMTLFI 130 >gi|298246531|ref|ZP_06970337.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] gi|297554012|gb|EFH87877.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] Length = 260 Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 12/147 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--F 62 LFI EGI+G+GK+T I+LL+++L + Y V + E +P + S G + Sbjct: 13 LFI-VEGIDGSGKSTQIALLRQWLISQGYSVFFS-EWNSSPLVKQT----TSRGKKKQIL 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ A D E+ I P L G I+L DR++ +++A RD+++ + ++E Sbjct: 67 TPTTFSLIHATDFADRTEHDIIPPLKAGAIVLADRYIYTAFA----RDAARGVNRTWVRE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQN 149 + V P +P+ + L+R+ N Sbjct: 123 LYRFAVQPTLAFYYRVPLSLSLRRIMN 149 >gi|67925004|ref|ZP_00518388.1| Thymidylate kinase [Crocosphaera watsonii WH 8501] gi|67853148|gb|EAM48523.1| Thymidylate kinase [Crocosphaera watsonii WH 8501] Length = 208 Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG----GTPAAEAARHVLLSCGVD 60 LFI EGI+ AGKTT LLK +L ++N ++ EP G +A ++ + Sbjct: 4 LFIVLEGIDKAGKTTQAELLKHYLIKQNNSAIISSEPTEGVIGKLIRKAMQNPVFVMKDK 63 Query: 61 EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + A +FAA R H+ N V + + ++ R+ SS AY Sbjct: 64 EKFDQQMAYLFAADRHYHLYNEVDGVYKLIKQDHCHVIATRYYFSSLAYNTNNQEE---- 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148 D + ++ + PD I LD+P+D+ L R++ Sbjct: 120 FDFVYGLNKRFPNPDVVIYLDIPLDVALCRLE 151 >gi|261202488|ref|XP_002628458.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081] gi|239590555|gb|EEQ73136.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081] gi|239612282|gb|EEQ89269.1| thymidylate kinase [Ajellomyces dermatitidis ER-3] Length = 232 Score = 54.7 bits (130), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 16/204 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T ++L++ LQ ++V R P T + L G Sbjct: 13 GALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTHLD 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + I+ + G ++ DR+ S Y +D L LD + Sbjct: 72 DHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKDIP-GLSLDWAWQP 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181 + PD + L++ + KR Y L ER + + R RQ+F IA Sbjct: 130 EIGLPQPDIWLFLNISPEEAAKR--GGYGL---------ERYENDTFQSRIRQLFQTLIA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205 R PD HI+D+ + + VA +++ Sbjct: 179 REDPDNVHIIDAGRTEREVALDVI 202 >gi|298246530|ref|ZP_06970336.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] gi|297554011|gb|EFH87876.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] Length = 262 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 19/153 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-- 61 G I EG +G G+TT + LL+ +L+ Y V T E R VL G+ + Sbjct: 54 GRLIVIEGTDGVGRTTQLRLLRPWLESLGYAVADT---------EFTRSVLAGDGIKQAK 104 Query: 62 ----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G + +A +D +E+++ PAL G I+L DR++ + A R ++ H +L Sbjct: 105 AGHTLGPITMHLFYATDFVDRLESLVLPALRAGFIVLIDRYIYTLMARAMVRGANPH-WL 163 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 S+ ++++ P+ L++ +D + RV R Sbjct: 164 RSIYSLALK---PNAIFYLNIGIDDLIPRVLQR 193 >gi|332181321|gb|AEE17009.1| Thymidylate kinase [Treponema brennaborense DSM 12168] Length = 208 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 12/205 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G+G +T I+LLK L N T EP R +L G + Sbjct: 6 FIVFEGIDGSGTSTQIALLKNKL--PNPGTLFTAEPTSLATGRFLRTLLR--GDERLTPG 61 Query: 66 AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +FAA R +HV ++ I +G I++ DR+ SS AYQ S + ++ Sbjct: 62 TMAYLFAADRYEHVHAQDGILQTCADGGIVVSDRYFFSSLAYQ-----SAECGRELPAKL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +P+ D+ + L R+ R S+ E F K +E+ + A Sbjct: 117 NESFPLPEYLFYFDIEPSVSLNRITGR-SVTEIYEKREFLEKTAAEYERIIGEYEKTAVG 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + +D++ S V+ NI +I+ Sbjct: 176 TGMKITRLDASESVAEVSENIWSIL 200 >gi|312128607|ref|YP_003993481.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] gi|311778626|gb|ADQ08112.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] Length = 240 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 14/161 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62 G I EG + +G++T I LLK +L+ Y V T G + V+ + Sbjct: 22 GKLIVIEGPDCSGRSTQIELLKEWLEASGYAVLNT----GLKRSRLVGDVIERAKKGNTL 77 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G ++++ D +EN I PAL G ++L DR++ + A RD + + L+ Sbjct: 78 GKTTLSLLYCCDFADQLENQIIPALSAGYVVLADRYIFTLMA----RDIVRGADKEWLKR 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + ++PD I LD+ +DI L R +Y LDY+E Sbjct: 134 LLGFAIVPDLIIYLDVSIDILLTRTFQKY-----GHLDYWE 169 >gi|172036089|ref|YP_001802590.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142] gi|171697543|gb|ACB50524.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142] Length = 208 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 14/154 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI EGI+ AGKTT LKR+L + ++ EP E R + S V + Sbjct: 4 LFIVLEGIDKAGKTTQAERLKRYLINQGDSAIISSEPTEGVIGELIRKAMQSP-VFKIND 62 Query: 65 EAE-----AIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 +A+ A +FAA R H+ N V + + ++ R+ SS AY +S+ Sbjct: 63 KAKFDQQMAYLFAADRHYHLYNEVDGVYKLIQQDHYHVIATRYYFSSLAY----NSNNQE 118 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 + + ++ + PD I LD+P+DI L R++N Sbjct: 119 EFNFVYGLNKRFPNPDLVIYLDIPLDIALSRLEN 152 >gi|28209987|ref|NP_780931.1| thymidylate kinase [Clostridium tetani E88] gi|28202422|gb|AAO34868.1| thymidylate kinase [Clostridium tetani E88] Length = 228 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 58/213 (27%), Positives = 86/213 (40%), Gaps = 29/213 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I E +G+GK T L L YDV P + A + LS EFG Sbjct: 6 GKLIVIEAPDGSGKATQTKKLYNKLVEDKYDVLKVEYPDYNSNSSALIKMYLSG---EFG 62 Query: 64 -------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 A A + FA R + G I+L DR+ S+ +Q + + + Sbjct: 63 DKPNDVNAYAASTFFAVDRFASFKKKWGAFYENGGIILADRYTTSNMVHQASKIKNVEEK 122 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FLD L ++ + +PD TI LDLP + ++NR + E KD IH Sbjct: 123 KKFLDWLWDLEFNLMGLPIPDATIFLDLPPEYSRNLIKNRKNKFTGE-----EEKD--IH 175 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 E R + +L+I+ + VD A + + N Sbjct: 176 E-RDEDYLNISYK-----NAVDIAEKYNWIKIN 202 >gi|225018256|ref|ZP_03707448.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum DSM 5476] gi|224948953|gb|EEG30162.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum DSM 5476] Length = 205 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 67/136 (49%), Gaps = 7/136 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEG++G+GK T I LL +R+ T EP + A R L+ AE Sbjct: 4 FIVFEGLDGSGKGTQIRLLCEEFKRRGEAFQQTAEPTFSVTGGAIRDA-LNGNHPRHPAE 62 Query: 66 AEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ F R+ H + I L +GK ++CDR+ SS+AYQG Q + +L Sbjct: 63 LAAL-FLTDRIYHNTGKFDGIELLLSQGKHVICDRYYYSSFAYQGTGCDMQWVMEMNLNC 121 Query: 123 ISVQEVMPDCTIILDL 138 ++++ PD I LD+ Sbjct: 122 PNIRK--PDLCIYLDV 135 >gi|154308900|ref|XP_001553785.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10] gi|150852604|gb|EDN27796.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10] Length = 242 Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 8/161 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ G FI EG++ AGKTT + L L +V + R P T A + L Sbjct: 18 ISRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDRTTAIGQQINSYLQSST- 76 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117 ++ ++F+A R + + IR + +G ++CDR+ S Y + DS HL L Sbjct: 77 ALPDQSIHLLFSANRWEKAQE-IRDLIAQGYTIVCDRYYYSGMIYTSSKYSIDSPNHLSL 135 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRE 155 + + + MPD I LDL + KR +Y RE Sbjct: 136 EWCKNPEIGLPMPDRVIFLDLEPEEAEKRGGYGDEKYETRE 176 >gi|310799971|gb|EFQ34864.1| thymidylate kinase [Glomerella graminicola M1.001] Length = 271 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 3/143 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG++ +GKTT + LL++ V V R P T L V E Sbjct: 40 GAFIAFEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRTTPIGQMIDAYLKSSV-EME 98 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + V+N I+ L G ++CDR+ S Y + + HL L ++ Sbjct: 99 DHVIHLLFSANRWEAVKN-IQTLLASGTTVICDRYYHSGIVYSAAKQNP-HLTLHWARQP 156 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + PD + LDL I +R Sbjct: 157 ELGLPRPDLVLFLDLEEAIARER 179 >gi|160902557|ref|YP_001568138.1| thymidylate kinase [Petrotoga mobilis SJ95] gi|160360201|gb|ABX31815.1| thymidylate kinase [Petrotoga mobilis SJ95] Length = 232 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 17/164 (10%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G+ I E G + +GK T +L + L+ + + P + A + L Sbjct: 1 MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKG-- 58 Query: 60 DEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ER 109 EFG EAI FA R + ++P G IL+ DR+ S+ YQ E Sbjct: 59 -EFGENPEAINPYAASTFFAVDRFATYQKELKPLYESGGILISDRYTTSNMIYQSSKFEN 117 Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 S + FL+ L ++ + P+ I LD+P I ++ ++ R Sbjct: 118 QSEKDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRKR 161 >gi|294979332|pdb|2WWF|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Tmp And Adp gi|294979333|pdb|2WWF|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Tmp And Adp gi|294979334|pdb|2WWF|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Tmp And Adp gi|294979335|pdb|2WWG|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Dgmp And Adp gi|294979336|pdb|2WWG|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Dgmp And Adp gi|294979337|pdb|2WWG|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Dgmp And Adp gi|294979338|pdb|2WWH|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Ap5dt gi|294979339|pdb|2WWH|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Ap5dt gi|294979340|pdb|2WWH|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Ap5dt gi|294979341|pdb|2WWI|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Aztmp And Adp gi|294979342|pdb|2WWI|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Aztmp And Adp gi|294979343|pdb|2WWI|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Aztmp And Adp Length = 212 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 17/149 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV--- 59 G FI FEG++ +GK+T LL +L+ N +V H+ P E ++S + Sbjct: 10 GKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLY-----FPNRETGIGQIISKYLKME 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E ++F+A R +H+ N I+ L++G ++CDR YAY G SS L L+ Sbjct: 65 NSMSNETIHLLFSANRWEHM-NEIKSLLLKGIWVVCDR-----YAYSGVAYSSGALNLNK 118 Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKR 146 ++ + + PD L++P + R Sbjct: 119 TWCMNPDQGLIKPDVVFYLNVPPNYAQNR 147 >gi|312128608|ref|YP_003993482.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] gi|311778627|gb|ADQ08113.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] Length = 249 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 7/144 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G EG +G+GK+T + LLK++L+ Y V T + + + Sbjct: 17 GRLFVVEGCDGSGKSTQVHLLKKWLEFLGYTVFFTE---WNSSDLVKNATKKAKKKNLLT 73 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ A D E +I P L G I+LCDR++ ++YA RD ++ + ++ + Sbjct: 74 PTTFSLLHACDFADRYERLILPHLRAGYIVLCDRYIYTAYA----RDIARGCNPEWVKTV 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV 147 V P T +PVD+ + R+ Sbjct: 130 YDFAVKPTVTFYFKVPVDVAIDRI 153 >gi|124807055|ref|XP_001350897.1| thymidylate kinase, putative [Plasmodium falciparum 3D7] gi|23497027|gb|AAN36577.1|AE014852_21 thymidylate kinase, putative [Plasmodium falciparum 3D7] Length = 210 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 17/149 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV--- 59 G FI FEG++ +GK+T LL +L+ N +V H+ P E ++S + Sbjct: 8 GKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLY-----FPNRETGIGQIISKYLKME 62 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E ++F+A R +H+ N I+ L++G ++CDR YAY G SS L L+ Sbjct: 63 NSMSNETIHLLFSANRWEHM-NEIKSLLLKGIWVVCDR-----YAYSGVAYSSGALNLNK 116 Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKR 146 ++ + + PD L++P + R Sbjct: 117 TWCMNPDQGLIKPDVVFYLNVPPNYAQNR 145 >gi|153006218|ref|YP_001380543.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] gi|152029791|gb|ABS27559.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] Length = 564 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 4/150 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 +F+SFEGI+G+GKT+ + + L+ + V RE G G+ A R + + E Sbjct: 1 MFVSFEGIDGSGKTSLSNQVCERLRAAGHSVLHAREKGILGSAVARRVRELTRDARLLEM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E + A ++ ++RPAL G I++ DR L S A +++ Sbjct: 61 SPRTELFLNLARETQQLDEIVRPALAGGGIVVADRSLHSLVALAAAGRGLPREEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 + PD +++D VD L R++ R Sbjct: 121 VGAAGTWPDLVVLVD--VDPDLARLRKRVG 148 >gi|251771464|gb|EES52041.1| thymidylate kinase [Leptospirillum ferrodiazotrophum] Length = 226 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 21/184 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF- 62 GL I+ EG +G+GKTT LLK + + V V+ E R + + Sbjct: 9 GLLIAIEGTDGSGKTTQAELLKHYYLSRGVAVVVS----ACNTVELIRKAISDLKQQNYL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++AA +D E+ I PAL G++++ ++++ + ++ R + + D + Sbjct: 65 DPVTFSFLYAADFVDRFEHQIIPALESGQLVIAEQYVYTVFS----RAILRGIAPDWISN 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE----------RKDVMIHEK 172 I ++P T LDLPV+ L+R+ + R+ DY+E +KD + + Sbjct: 121 IFDFALVPAKTFYLDLPVETLLERLH--WKTRQERFFDYYESGMDMNLSGRKKDSFVIYQ 178 Query: 173 RRQI 176 RR I Sbjct: 179 RRLI 182 >gi|254827258|ref|ZP_05231945.1| thymidylate kinase [Listeria monocytogenes FSL N3-165] gi|258599640|gb|EEW12965.1| thymidylate kinase [Listeria monocytogenes FSL N3-165] Length = 77 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 37/58 (63%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G +E Sbjct: 4 IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEM 61 >gi|71394067|gb|AAZ32106.1| thymidilate kinase [uncultured euryarchaeote Alv-FOS5] Length = 212 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 6/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +FI FEGI+ +GK T LL + L++K + V++ P L V E Sbjct: 2 NMFIVFEGIDASGKETQAKLLAKALKKKGHKVYMVDFPNYKNPIGKMIKKFLDKKV-ELD 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E A+++AA R ++ + + AL + KI++ DR+ S+ AYQG ++ + L + Sbjct: 61 VETRALLYAADRRYELKGITK-ALDDNKIVIADRYCYSNIAYQGSLGAN----ISWLASL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 V PD LD+P L+R Sbjct: 116 DATLVFPDLVFYLDIPAKESLRR 138 >gi|206603547|gb|EDZ40027.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG'] Length = 229 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEF 62 G I+ EG +G+GKTT LLK F + + V ++ P T AE R + + Sbjct: 9 GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVLS--PCNT--AELIRGAISKLKERNTL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++AA +D E+VI PAL GK+++ ++++ + +A R Q D +++ Sbjct: 65 DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + + P T LD+ + L R+Q + R+ DY+E Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYE 159 >gi|124516693|gb|EAY58201.1| Thymidylate kinase [Leptospirillum rubarum] Length = 229 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 11/161 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEF 62 G I+ EG +G+GKTT LLK F + + V ++ P T AE R + + Sbjct: 9 GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVLS--PCNT--AELIRGAISKLKERNTL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++AA +D E+VI PAL GK+++ ++++ + +A R Q D +++ Sbjct: 65 DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + + P T LD+ + L R+Q + R+ DY+E Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYE 159 >gi|148264685|ref|YP_001231391.1| thymidylate kinase [Geobacter uraniireducens Rf4] gi|146398185|gb|ABQ26818.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 226 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 12/161 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I EG +G+G++T ++LLK +L+ + H T + G + + + + + Sbjct: 17 AGKLIVIEGADGSGRSTQMALLKDYLEGRG---HATVDVGLRRSTLVSEELQEAKQGNVL 73 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G ++ +A D +EN I PAL G I+L DR++ + A RD + D ++ Sbjct: 74 GEITRSLFYATDFADQLENRIIPALRAGFIVLADRYIYTLMA----RDIVRGADRDWVRS 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + ++PD I L + ++R + R++A LDY+E Sbjct: 130 LYGLALVPDLVIYLRVSPSQLVER-----NFRKNATLDYWE 165 >gi|315427436|dbj|BAJ49042.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum] gi|315427468|dbj|BAJ49072.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum] Length = 200 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 25/185 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCGV 59 +I+ EGI+GAGKTT LL R L R + V EP GG A+ V +S Sbjct: 4 FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREALAKRVNMS--- 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E A++FAA RL E ++ A G ++ DR + SS AYQ S+ + Sbjct: 61 ----EEVLALLFAADRLTLREKIV-SAKQSGVYVVSDRSVVSSLAYQ----SAALGLRNW 111 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHEKRR 174 + E++ V PD + +D+ + LKR++ + E+ F RK ++H+ RR Sbjct: 112 VYEVNRFAVKPDIIVYIDISPETALKRLRKKSQRYENMV---FLRKVKNAYSRVLHDFRR 168 Query: 175 QIFLD 179 + +D Sbjct: 169 VVVVD 173 >gi|116330468|ref|YP_800186.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281774|sp|Q04UJ2|KTHY_LEPBJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116124157|gb|ABJ75428.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 205 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 10/154 (6%) Query: 5 LFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +F+ FEGI+G+GK+T SL ++ +R V+ T EP + R L G + Sbjct: 7 IFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFT-EPTNFETGKYLRKFL--RGEIDLE 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + F R + + I P+L GK +L DR++ S+ AYQ S L +++ E Sbjct: 64 RKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQ----SGDDLLPETIIEK 119 Query: 124 SVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 ++++ +PD LDL I L+R+ R +E Sbjct: 120 NLKKNFKIPDLLFYLDLNPAIALERLSQRKENKE 153 >gi|91203291|emb|CAJ72930.1| similar to thymidylate kinase [Candidatus Kuenenia stuttgartiensis] Length = 234 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 14/223 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAE-AARHVLLSCG-V 59 G I GI+G+GKT LL L ++ Y V P G T AE A+++ S G Sbjct: 11 GKLIVITGIDGSGKTVQTKLLYERLLKEGYPVATIDFPQYGKTFFAEMVAKYLRGSFGAA 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG------ERDSSQ 113 D +I++A R + ++ I+ + GKI++ +R++ + A+QG E + Sbjct: 71 DAVSPYLASILYAGDRFEK-KDQIQTWIDAGKIIISNRYVCDNMAHQGGKIKNSEERAQF 129 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +LD L+ P +I+L +P +I V+ + A ++ M H K Sbjct: 130 FQWLDQLEHTVFGIPRPHLSILLYVPAEIAYFLVEKKGQREYLAGAKKDIHEEDMHHMKS 189 Query: 174 RQ-IFLDIARNQPDRCHIVDSAHSFQSVATNIL-NIVWELVQK 214 Q F++IA+ +P+ VD + + +++ + +W+ V K Sbjct: 190 AQETFIEIAKGKPN-WKTVDCTKNNTLLPEHVIADTIWQAVAK 231 >gi|315425277|dbj|BAJ46945.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum] Length = 200 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 25/185 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCGV 59 +I+ EGI+GAGKTT LL R L R + V EP GG A+ V +S Sbjct: 4 FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREALAKRVNMS--- 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E A++FAA RL E ++ A G ++ DR + SS AYQ S+ + Sbjct: 61 ----EEVLALLFAADRLTLREKIV-SAKQSGVYVVSDRSVVSSLAYQ----SAALGLRNW 111 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHEKRR 174 + E++ V PD + +D+ + LKR++ + E+ F RK ++H+ RR Sbjct: 112 VYEVNRFAVKPDIIVYIDISPETALKRLRKKSQRYENMV---FLRKVKNAYSRVLHDFRR 168 Query: 175 QIFLD 179 + +D Sbjct: 169 VVVVD 173 >gi|116328926|ref|YP_798646.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122283291|sp|Q04YY2|KTHY_LEPBL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116121670|gb|ABJ79713.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 205 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 10/154 (6%) Query: 5 LFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +F+ FEGI+G+GK+T SL ++ +R V+ T EP + R L G + Sbjct: 7 IFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFT-EPTNFETGKYLRKFL--RGEIDLE 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + F R + + I P+L GK +L DR++ S+ AYQ S L +++ E Sbjct: 64 RKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQ----SGDDLLPETIIEK 119 Query: 124 SVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 ++++ +PD LDL I L+R+ R +E Sbjct: 120 NLKKNFKIPDLLFYLDLNPAIALERLSQRKENKE 153 >gi|213029631|ref|ZP_03344078.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 89 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 4/84 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRP 85 +AE ++ AAR+ V NV P Sbjct: 65 ITDKAEVLIVLAARVQLVRNVTNP 88 >gi|14601836|ref|NP_148377.1| thymidylate kinase [Aeropyrum pernix K1] gi|8134528|sp|Q9YA48|KTHY_AERPE RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP kinase gi|5105789|dbj|BAA81101.1| thymidylate kinase [Aeropyrum pernix K1] Length = 208 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 14/170 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGA 64 ++ EGI+G+G +TH LL L + +EP P R L S GVD + Sbjct: 3 IVALEGIDGSGVSTHSRLLHARLAGAGVKSCLWKEPTEGPVGRLIRGFLRSTEGVD---S 59 Query: 65 EAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A++FAA RL + V+ ++L+ DR+ SS AYQG S ++D Sbjct: 60 DLMALLFAADRLWGLRLGVVERCGGSPEVLVVDRYKYSSLAYQG--VGSGLEWVD----- 112 Query: 124 SVQEVMPDCTII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 +V P+ I+ +D+P ++ L+R+ R ++ ER M E Sbjct: 113 AVNRKAPEAEILVYIDVPTEVALRRITARERREVFETPEFLERVKSMYEE 162 >gi|312897767|ref|ZP_07757183.1| dTMP kinase [Megasphaera micronuciformis F0359] gi|310621151|gb|EFQ04695.1| dTMP kinase [Megasphaera micronuciformis F0359] Length = 223 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 28/189 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL+R L V P + A + L +FG Sbjct: 3 GHLIIIEGGDGSGKATQTELLRRHLADDGEFVKAVSYPDYDSESSALVKMYLRG---DFG 59 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDS 111 +A+ I +A R+ E + +G I+L DR+ S+ YQ G+ D Sbjct: 60 TDADTINPYAASAFYAVDRIASYELKWKRFFKDGGIVLADRYTTSNMLYQMIKIPGKAD- 118 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 Q +LD L + +++ PD I+LD+P+++ + + R D Sbjct: 119 -QDAYLDWLWDFEFKKLGLPEPDAVILLDVPLEVTERLMSERTGKTGGTTGD-------- 169 Query: 169 IHEKRRQIF 177 IHEK R+ Sbjct: 170 IHEKDREFL 178 >gi|301118893|ref|XP_002907174.1| thymidylate kinase [Phytophthora infestans T30-4] gi|262105686|gb|EEY63738.1| thymidylate kinase [Phytophthora infestans T30-4] Length = 216 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 40/231 (17%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE---AARHVLLSCGVD 60 G+F+ FEG++ GKTT LL L + P+A R + + Sbjct: 5 GIFLLFEGVDRCGKTTQTKLLHDALNASS---------SSQPSALLHFPDRSTAIGKSIH 55 Query: 61 EFGAEAEA-------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + +EA ++F+A R + I L G+ ++ DR+ S A+ + Sbjct: 56 SYLTSSEAMDDHVIHLLFSANRWEAASK-IESILASGQHIIMDRYSFSGVAFSAAKSG-- 112 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIH 170 + LD + PD I LD+PV R Q RY + Sbjct: 113 -MSLDWCWAPEIGLPKPDAIIFLDVPVTQASTRADFGQERY-------------ETTAFQ 158 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV-SPLS 220 EK + F DI + H+VD+ + + V ++ I E ++K SPL+ Sbjct: 159 EKVYRNFYDIMERATPKWHVVDATGTIEQVQEKVMAIAKETIKKYAESPLT 209 >gi|295666950|ref|XP_002794025.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01] gi|226277678|gb|EEH33244.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01] Length = 232 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 18/222 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T +LL++ LQ++ ++V R P T A + L G Sbjct: 13 GALIVVEGLDRAGKSTQCALLQKTLQQEGHEVKYRRFPNRTTAIGKLINAYL-VGDSHLD 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F+A R + + IR + G ++ DR+ S Y +D L LD + Sbjct: 72 DHSIHLLFSANRWEAAKE-IRKDISNGISIIIDRYSYSGAVYSAAKDVP-GLSLDWAWQP 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181 + PD + L++ + +R Y L ER + I + R RQ+F I Sbjct: 130 EIGLPQPDIWLFLNISPEEAARR--GGYGL---------ERYENDILQARVRQLFQTFIE 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221 R P+ ++++ S VA +IL+ + ++K + PL S Sbjct: 179 REDPENVCVINAGRSEVDVAQDILSEARKAIKKIQAIGPLRS 220 >gi|226287197|gb|EEH42710.1| thymidylate kinase [Paracoccidioides brasiliensis Pb18] Length = 232 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 18/222 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T +LL++ LQR+ ++V R P T A + L G + Sbjct: 13 GALIVVEGLDRAGKSTQCALLQKTLQREGHEVKYRRFPDRTTAIGKLINAYL-VGDSQLD 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F+A R + + I+ + G ++ DR+ S Y +D L LD + Sbjct: 72 DHSIHLLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKDVP-GLSLDWAWQP 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181 + PD + L++ + +R Y L ER + I + R RQ+F I Sbjct: 130 EIGLPQPDIWLFLNISPEEAARR--GGYGL---------ERYENDILQARVRQLFQTFIE 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221 R P ++++ S VA +IL+ + ++K + PL S Sbjct: 179 REDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 220 >gi|111023286|ref|YP_706258.1| thymidylate kinase [Rhodococcus jostii RHA1] gi|110822816|gb|ABG98100.1| probable thymidylate kinase [Rhodococcus jostii RHA1] Length = 227 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G I+ EG++GAGK T + + L + V P G + A+ A L D Sbjct: 2 GKLIALEGLDGAGKRTLVGAVVGRLTEQGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R V + L E +++ DR++ S+ AY R + F+ Sbjct: 62 SDSVYAMAVMFALDRSGAVGELAE-LLAEHDLVILDRYVASNAAYGAARLHQGADGEFVG 120 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +Q + + + PD + LD+PV + +R + R S S LD +ER D + E+ + Sbjct: 121 WVQNLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTGE 179 Query: 176 IFLDIA 181 ++ ++A Sbjct: 180 VYRELA 185 >gi|272761198|gb|ACZ95828.1| thymidylate kinase [Jujube witches'-broom phytoplasma] Length = 212 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/168 (26%), Positives = 83/168 (49%), Gaps = 16/168 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT+ I L+ L+ + + + G + + R + L+ E+ Sbjct: 3 LIVFEGLDGSGKTSLIHALQPQLKTPH---QLYQGLGSSSLGKEIRDLFLNFQQVEY--- 56 Query: 66 AEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQ 121 + A + ++ +I P L ++++ DR+L S+YAYQ ++ Q L L + Sbjct: 57 ITRFYLSLANMSQIQAELIIPQLKNNQLIILDRWLPSTYAYQLFPFSKEKQQLLSLKQIF 116 Query: 122 EISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163 +I+ + ++ PD I LD+ IG R +N+ + L E L YF+ Sbjct: 117 KINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQRDLIERQSLTYFQ 164 >gi|146303756|ref|YP_001191072.1| thymidylate kinase-like protein [Metallosphaera sedula DSM 5348] gi|145702006|gb|ABP95148.1| Thymidylate kinase-like protein [Metallosphaera sedula DSM 5348] Length = 210 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/227 (24%), Positives = 98/227 (43%), Gaps = 36/227 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-----GTPAAEAARHVLLSCG 58 G I+ EG EG+G+T H+S LK +L+ + Y V VT G G P ++ R ++ Sbjct: 3 GKIIALEGSEGSGRTYHVSSLKTYLEEQGYGV-VTFGLGMSRLMGEPISKKKRDIV---- 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 F + + D +EN ++P + G + + D ++ + A+ R L+ Sbjct: 58 ---FQRRTLFLAYVTDLADQIENEVKPMVKAGFLAIADGYVSTLKAWGLARG------LE 108 Query: 119 SLQEISVQEVMPDCTIILDL---PVDIGLKRVQNRYSLRESACLDYFERK-DVMI----- 169 V +P + L L P +I ++R+ L++ LD D+ I Sbjct: 109 EEWMNYVLSALPHANLSLGLVSSPREI-MRRI-----LKKKGVLDPLSSGIDICINGELF 162 Query: 170 --HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +E F D R IVD++ +F+ V + I IV + ++K Sbjct: 163 SSYETYLNTFQDYLRKVIQNGVIVDTSRNFEVVKSEIATIVGDRIEK 209 >gi|223938822|ref|ZP_03630710.1| thymidylate kinase [bacterium Ellin514] gi|223892520|gb|EEF58993.1| thymidylate kinase [bacterium Ellin514] Length = 229 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 20/164 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG----TPAAEAARHVLLSCGV 59 G I+ EG++G+GK+T I LLKR+L+ + + V + + ++ + LL+ Sbjct: 12 GRLIAVEGLDGSGKSTQIYLLKRWLELQGFKVFFSEWNSSQLVKSATSKGKKRELLT--- 68 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +++ A D E + P L G ++LCDR++ +++A RD+ + + Sbjct: 69 ----PTTFSLIHATDFADRYERQLVPLLRAGYLVLCDRYIFTAFA----RDTVRGCPPEW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 ++ + PD T +++ L+R+ L L YFE Sbjct: 121 VRGLYNFAAHPDLTFFFKAQLEVSLQRI-----LDGRPQLKYFE 159 >gi|148264612|ref|YP_001231318.1| thymidylate kinase [Geobacter uraniireducens Rf4] gi|146398112|gb|ABQ26745.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 227 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 24/167 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG +G+G++T + LLK +L+ K H T G R L+S ++E Sbjct: 17 AGKLIVIEGADGSGRSTQMELLKDYLEGKG---HATVNVG------LLRSTLVSEELNEA 67 Query: 62 -----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G ++ +A D +EN I PA+ G I+L DR++ + A RD + Sbjct: 68 KQGNVLGEITRSLFYATDFADQLENRIIPAMKAGFIVLADRYIYTLMA----RDIVRGAD 123 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 D ++ + V+PD I L + ++R + R+++ LDY+E Sbjct: 124 RDWVRALYGIAVVPDLVIYLRVSPAQLVER-----NFRKNSTLDYWE 165 >gi|219121041|ref|XP_002185752.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582601|gb|ACI65222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 245 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 19/220 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCG 58 ++ G F+ EG++ GKTT LL + L R P T A +++ S Sbjct: 8 ISRGAFVVLEGVDRCGKTTQSGLLLKRLLAAGIAACSMRFPDRTTATGKIIDQYLQSSQN 67 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHL 115 +D+ A ++F+A R + + + L G +LCDR+ S A+ ++ + L Sbjct: 68 LDD---RAIHLLFSANRWESA-DALTAHLQAGTTVLCDRYAYSGVAFSASKIDKKGNSLL 123 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 LD Q PDC I LDL Q R + +E+K++ I + R Sbjct: 124 SLDWCQAPDQGLPAPDCVIFLDLS--------QAEAEQRGGYGGERYEKKEMQIRVRHRF 175 Query: 176 IFLDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQ 213 L+ R +D+A S + V +I V E +Q Sbjct: 176 GDLEAIDKASGRVAWKFIDAAQSVEQVENDIWKAVEETIQ 215 >gi|262198778|ref|YP_003269987.1| thymidylate kinase [Haliangium ochraceum DSM 14365] gi|262082125|gb|ACY18094.1| thymidylate kinase [Haliangium ochraceum DSM 14365] Length = 572 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 31/209 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+ FEGI+G+GKTT + + + L+R+ V RE GG A+ L + EFG Sbjct: 1 MFVVFEGIDGSGKTTVSNKVAKVLRRRGLAVEHVRE-GGEFASP------LVGRMREFGK 53 Query: 65 E---------AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + E + + A + I+PAL G ++ DR+L Y+Y+ + + Sbjct: 54 DPRNMAMAPLTELLFYVARDAQLLAECIQPALRRGGLVFADRYL---YSYEVLSHHGRGV 110 Query: 116 FLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYS-------LRESACLDYFERK 165 +D ++ I V PD + LD V+ L R + + + + Sbjct: 111 PMDQVRPILDAVSGGVWPDLVVYLD--VEPTLARARRKVGKLIKKSKGGKPGGGSRKGLQ 168 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 V + R +L++A P+R +VD+A Sbjct: 169 GVGTQHRLRAGYLELAERDPERWLVVDNA 197 >gi|227826765|ref|YP_002828544.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|227829399|ref|YP_002831178.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|229583935|ref|YP_002842436.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238618864|ref|YP_002913689.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|284996770|ref|YP_003418537.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] gi|227455846|gb|ACP34533.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|227458560|gb|ACP37246.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|228018984|gb|ACP54391.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238379933|gb|ACR41021.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|284444665|gb|ADB86167.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] gi|323473847|gb|ADX84453.1| dTMP kinase [Sulfolobus islandicus REY15A] gi|323476501|gb|ADX81739.1| dTMP kinase [Sulfolobus islandicus HVE10/4] Length = 213 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 33/142 (23%), Positives = 73/142 (51%), Gaps = 8/142 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL I+FEGI+G+GK++ LLK +++ + DV++T + + + + Sbjct: 3 GLLIAFEGIDGSGKSSQAVLLKDWIEMRR-DVYLTEWNSSDWIHDIIKE---AKKKNTLT 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ A D E I P L G +++CDR++ ++YA RD +++ + ++++ Sbjct: 59 PTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKKL 114 Query: 124 SVQEVMPDCTIILDLPVDIGLK 145 + P+ T + + ++ L+ Sbjct: 115 YSFAIKPNFTFYIRVTPEVALE 136 >gi|218437720|ref|YP_002376049.1| dTMP kinase [Cyanothece sp. PCC 7424] gi|218170448|gb|ACK69181.1| dTMP kinase [Cyanothece sp. PCC 7424] Length = 207 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 12/154 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDE 61 LFI EGI+G+G +T SLL+ + K ++ EP + R + + C D+ Sbjct: 4 LFIVLEGIDGSGTSTQASLLQDYFINKGEKAVISPEPTSGVIGKLIREAMQKPIICLEDQ 63 Query: 62 FGAEAE-AIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + A +FAA R H+ N V + + ++ R+ SS AY + F Sbjct: 64 QKFDQQMAYLFAADRHYHLYNDSDGVFKLIEKDQCHVITTRYYFSSLAYNC-HTPEEFKF 122 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + L E + PD I +DLPV++ L+R+Q R Sbjct: 123 VSQLNE---RFPNPDLVIYIDLPVEVSLERLQER 153 >gi|269118666|ref|YP_003306843.1| thymidylate kinase [Sebaldella termitidis ATCC 33386] gi|268612544|gb|ACZ06912.1| thymidylate kinase [Sebaldella termitidis ATCC 33386] Length = 227 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 10/157 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LSCGV 59 G I EG +G+GK T +LL + L+ +N+++ P +PA+E + L V Sbjct: 2 GKLIIIEGSDGSGKETQTNLLYKKLKERNFNIKKISFPNYESPASEPLKMYLSGEFGKDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLF 116 ++ + A + FA R + I+L DR+ S+ +Q E + + +F Sbjct: 62 NDVNSFAASTFFAVDRYASYKQDWEKFYNNSGIVLSDRYTTSNMVHQASKIENEEDKQIF 121 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 L L ++ ++ PD I LD+ ++ K + +R Sbjct: 122 LKWLIDLEWNKLGLPTPDIVIFLDVSPELSQKLMSDR 158 >gi|258645659|ref|ZP_05733128.1| dTMP kinase [Dialister invisus DSM 15470] gi|260403025|gb|EEW96572.1| dTMP kinase [Dialister invisus DSM 15470] Length = 222 Score = 52.0 bits (123), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 12/172 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LSCG 58 +G I EGI+G+GK T LL+ L ++ DV H++ G+P++ + L Sbjct: 2 NGKLIVLEGIDGSGKATQSGLLEDHLIKRGKDVMHISFPDYGSPSSALVKMYLNGDFGRA 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 + A ++++A R + G +++ DR+ S+ +Q + + + Sbjct: 62 PGDVNPYAASMLYAVDRFASFRMKWKSFYENGGVVIADRYTTSNMVHQMTKYDDEGKRKE 121 Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 FL L + +E+ PD I+LD+P + K V+ R ++ +D E+ Sbjct: 122 FLSWLDHMEYEELELPRPDVVILLDVPPAVSKKLVRER--AKQGGSMDIHEQ 171 >gi|163784586|ref|ZP_02179432.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159880147|gb|EDP73805.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 51 Score = 52.0 bits (123), Expect = 6e-05, Method: Composition-based stats. Identities = 24/48 (50%), Positives = 31/48 (64%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51 G+FI+FEGIEGAGK+T L +L K + +TREPGGT + R Sbjct: 3 GVFITFEGIEGAGKSTQAKKLYEYLISKGKNAVLTREPGGTKTGKKIR 50 >gi|221062039|ref|XP_002262589.1| thymidylate kinase [Plasmodium knowlesi strain H] gi|193811739|emb|CAQ42467.1| thymidylate kinase, putative [Plasmodium knowlesi strain H] Length = 219 Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 13/147 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAE-AARHVLLSCGVDE 61 G FI FEG++ +GK+T LL L+RKN +V H+ TP + A+++ + ++ Sbjct: 16 GKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQ---ND 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R + + + R L +G ++CDR YAY G SS L L Sbjct: 73 MTNETIHLLFSANRWELMGEIKR-LLSKGVWVVCDR-----YAYSGVAYSSGALKLSKTW 126 Query: 122 EISVQE--VMPDCTIILDLPVDIGLKR 146 ++ + + PD L++P + +R Sbjct: 127 CMNPDQGLIKPDVVFYLNVPPNYAQQR 153 >gi|261330431|emb|CBH13415.1| thymidylate kinase, putative [Trypanosoma brucei gambiense DAL972] Length = 345 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 14/198 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGT-PAAEAARHVLLS--C 57 + G I FEG +GAGK T +++ L ++ H + + P + R VL Sbjct: 126 SEGAVIVFEGGDGAGKATQTEYMRKRLDKEG-KAHASLDFPSDKHRYGKLIRKVLSGERG 184 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL 115 + + + +++F+ R D + +R L GK +L DR+ S++ +Q + +S + Sbjct: 185 ALHDLDPKLFSLLFSLNRFDTLPE-LRYWLTHGKKILLDRYYTSNFGHQASKLEESERSD 243 Query: 116 FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 F+ L+++ ++ + PD + LDLP L +Q R RES LD E + E Sbjct: 244 FIRHLEQLELEWLKLPPPDVALYLDLPPAAALVAMQ-RDEKRES--LDIHETAGLSYKEN 300 Query: 173 RRQIFLDIARNQPDRCHI 190 RQ ++ +NQ + I Sbjct: 301 VRQTYVWCCQNQRNWVQI 318 >gi|331695112|ref|YP_004331351.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] gi|326949801|gb|AEA23498.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] Length = 569 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 26/211 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG----GTPAAEAARHVLLSCGVD 60 + I+FEG+ GAGK+T +L R L+ + HVT P T A LL G D Sbjct: 1 MLITFEGLPGAGKSTQSRMLARCLEANGH--HVTVLPDLATLDTEPISATLVDLLRTGDD 58 Query: 61 EFGAEAEAI----VFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQH 114 F +AI + AA R D V V+ PAL E +++ DR + + +Y QH Sbjct: 59 PFLRTGDAITDTMITAAIRADLVATVLDPALAENPAGVVIEDRGIHTMASYAIAALLRQH 118 Query: 115 -----LFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-------Y 161 + LD L ++ + P + L +P ++ +R R R A D + Sbjct: 119 RAPAEIALDWLNALTALAGPRPTRALWLRIPPNVAARRADERGGDRRPASTDEQRAHLTW 178 Query: 162 FERKDVMIHEKRRQI-FLDIARNQPDRCHIV 191 + ++ E+ Q+ LD+ P H+ Sbjct: 179 VDHAYALLAERDPQLTVLDVIDLDPVDTHLA 209 >gi|290967771|ref|ZP_06559324.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L] gi|290782130|gb|EFD94705.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L] Length = 232 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 18/153 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG +G+GK T LL R L R+ V+ VT +P++ + L +F Sbjct: 3 GKLIVIEGGDGSGKATQADLLYRRLNREGKPVYKVTFPDYDSPSSMLVKMYLQG----QF 58 Query: 63 GAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---S 112 G +A+++ +A R + + L +G I++ DR+ S+ YQ + S + Sbjct: 59 GKQADSVNPYAASTFYAVDRFASYQMKWKTLLAQGYIIIADRYTTSNMLYQMIKISAPAA 118 Query: 113 QHLFLDSLQE---ISVQEVMPDCTIILDLPVDI 142 + +LD L + I + +PD I+LD+P+ + Sbjct: 119 RQTYLDWLWDFEFIKMGLPIPDIVILLDVPLAV 151 >gi|86159732|ref|YP_466517.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776243|gb|ABC83080.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] Length = 561 Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 4/150 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 + +SFEGI+G+GKT +L+ L+R +V RE G T AA R + + E Sbjct: 1 MLVSFEGIDGSGKTALSNLVCERLRRGGREVVHARERGVLATAAARRVRELTRDPRLLEL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + A +E V+RPAL G + + DR L S A +++ Sbjct: 61 SPRAELCLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 + PD +++D VD L R++ R Sbjct: 121 AASGGTWPDLAVLVD--VDPDLARLRKRVG 148 >gi|313157974|gb|EFR57380.1| dTMP kinase [Alistipes sp. HGB5] Length = 229 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 15/186 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60 +FI EG++GAGK+T I +L++ + + VH R AR + GV Sbjct: 1 MFIVLEGLDGAGKSTQIRMLRQLFTDRGVESEYVHFPRFDSPVYGQLIARFLRGEFGGVQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114 E A++FA R D IR L EGK ++ DR++ S+ +Q GE Sbjct: 61 EVDPYLVALIFAGDRADAAPQ-IRQWLAEGKAVVLDRYVYSNVGFQCAKLPAGEERDRLA 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ +L+ PD ++ LD+P +++ +RE DY + IHE Sbjct: 120 DWIVNLEFGHNALPRPDLSLFLDVPFAFTERKLSE---VREGDDRDYLQGGQ-DIHEASL 175 Query: 175 QIFLDI 180 Q+ D+ Sbjct: 176 QLQQDV 181 >gi|156044845|ref|XP_001588978.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980] gi|154694006|gb|EDN93744.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980 UF-70] Length = 242 Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 10/162 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGV 59 ++ G FI EG++ AGKTT + L L +V + R P T + + L S + Sbjct: 18 LSRGSFILIEGLDRAGKTTQVRKLCDRLYASGRNVKLMRFPDRTTSIGQQINSYLQSSTI 77 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 +A ++F+A R + + I + +G ++CDR+ S Y + DS HL Sbjct: 78 --LPDQAIHLLFSANRWEKAQE-IHQFIAQGYTIVCDRYYYSGMIYTSSKYPTDSPNHLS 134 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRE 155 L+ + + MPD I LDL + KR +Y RE Sbjct: 135 LEWCKNPEIGLPMPDKVIFLDLEPEEAEKRGGYGDEKYETRE 176 >gi|291514468|emb|CBK63678.1| thymidylate kinase [Alistipes shahii WAL 8301] Length = 228 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 57/231 (24%), Positives = 107/231 (46%), Gaps = 23/231 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60 +FI EG++GAGK+T I +L++ L + + VH R AR + GV+ Sbjct: 1 MFIVLEGLDGAGKSTQIRMLRQLLAERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114 E A++FA R IR + EGK ++ DR++ S+ +Q GER Sbjct: 61 EVDPYLVALLFAGDRA-AAGPQIRAWIAEGKAVVLDRYVYSNVGFQCAKLPAGERRDRLA 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-----RKDVMI 169 ++ L+ PD ++ LD+P +++ +RE DY + +D + Sbjct: 120 QWILDLEFGYNDLPRPDLSLFLDVPFAFTERKLTE---VREGDDRDYLQGSRDIHEDALD 176 Query: 170 HEKR-RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 ++R R+++L A + D +VD + ++ + N +E ++ ++P+ Sbjct: 177 LQRRVREVYL-AAAAKDDSLRVVDCSDPSGAMGSPEHN--FEKIRAVLAPI 224 >gi|168185104|ref|ZP_02619768.1| putative thymidylate kinase [Clostridium botulinum Bf] gi|237793368|ref|YP_002860920.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657] gi|182671852|gb|EDT83813.1| putative thymidylate kinase [Clostridium botulinum Bf] gi|229263044|gb|ACQ54077.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657] Length = 231 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQAKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111 EFG + +++ +A R + ++G I++ DR+ S+ +Q + Sbjct: 58 EFGKDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDV 117 Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139 ++ FL+ L + ++ +PDC I LD+P Sbjct: 118 QAKDNFLNWLWDFEFKKFNLPVPDCVIFLDMP 149 >gi|115373942|ref|ZP_01461233.1| integral membrane protein with kinase activity [Stigmatella aurantiaca DW4/3-1] gi|310817945|ref|YP_003950303.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|115369070|gb|EAU68014.1| integral membrane protein with kinase activity [Stigmatella aurantiaca DW4/3-1] gi|309391017|gb|ADO68476.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] Length = 560 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 15/199 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 + I FEGI+G+GKTT + + + L++ V RE G +P +E+ R Sbjct: 1 MLIVFEGIDGSGKTTLSNRVAQELRQAGLRVRHVREGGQLASPVSESLRRFTRDPANLAL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----QGERDSSQHLFLD 118 AE +++AA ++ V RPAL I++ DRF ++ +G ++S LD Sbjct: 61 TPMAELLLYAAREAQLLDEVTRPALATHDIVITDRFFYTAEVLARWGRGLPETSVRPVLD 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM---IHEKRRQ 175 + + + PD ++D VD + R + + S + RK + + + R Sbjct: 121 A----CARGLKPDLVFLID--VDPTIARARRKISKIITPKPGAPSRKGLAGAGLQVRLRA 174 Query: 176 IFLDIARNQPDRCHIVDSA 194 + +A P R +V++A Sbjct: 175 GYRTLAEESPGRWSLVENA 193 >gi|272761174|gb|ACZ95827.1| thymidylate kinase [Jujube witches'-broom phytoplasma] Length = 212 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 42/181 (23%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT+ I L+ P + + G G E Sbjct: 3 LIVFEGLDGSGKTSLIHALQ-------------------PQLKTPHQLYQGLGSSSLGKE 43 Query: 66 AEAIVFAAARLDHVE--------------NVIRPALMEGKILLCDRFLDSSYAYQ---GE 108 + ++D++ +I P L ++++ DR+L S+YAYQ Sbjct: 44 IRDLFLNFQQVDYITRFYLSLANMSQIQAELIVPQLKNNQLIILDRWLPSTYAYQLFPFS 103 Query: 109 RDSSQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYF 162 ++ Q L L + +I+ + ++ PD I LD+ IG R +N+ + L E L YF Sbjct: 104 KEKKQLLPLKKIFKINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQRDLIERQSLTYF 163 Query: 163 E 163 + Sbjct: 164 Q 164 >gi|126701174|ref|YP_001090071.1| putative thymidylate kinase [Clostridium difficile 630] gi|254977174|ref|ZP_05273646.1| putative thymidylate kinase [Clostridium difficile QCD-66c26] gi|255094504|ref|ZP_05323982.1| putative thymidylate kinase [Clostridium difficile CIP 107932] gi|255102760|ref|ZP_05331737.1| putative thymidylate kinase [Clostridium difficile QCD-63q42] gi|255308581|ref|ZP_05352752.1| putative thymidylate kinase [Clostridium difficile ATCC 43255] gi|255316255|ref|ZP_05357838.1| putative thymidylate kinase [Clostridium difficile QCD-76w55] gi|255518916|ref|ZP_05386592.1| putative thymidylate kinase [Clostridium difficile QCD-97b34] gi|255652095|ref|ZP_05398997.1| putative thymidylate kinase [Clostridium difficile QCD-37x79] gi|306521829|ref|ZP_07408176.1| putative thymidylate kinase [Clostridium difficile QCD-32g58] gi|115252611|emb|CAJ70454.1| Thymidylate kinase (dTMP kinase) [Clostridium difficile] Length = 229 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L I G + +GK T +L L+++ Y + P + A + L Sbjct: 1 MKGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109 +FG A + F A R + EG I++ DR+ S+ +Q + Sbjct: 58 DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDIC 117 Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150 D ++L + E ++ ++ PDC I LD+P++ K ++NR Sbjct: 118 DREEYLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENR 159 >gi|170755522|ref|YP_001779682.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra] gi|169120734|gb|ACA44570.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra] Length = 231 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111 EFG + +++ +A R + ++G I++ DR+ S+ +Q + Sbjct: 58 EFGRDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDV 117 Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139 ++ FL+ L + ++ +PDC I LD+P Sbjct: 118 QAKDNFLNWLWDFEFKKFNLPVPDCVIFLDMP 149 >gi|168181169|ref|ZP_02615833.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916] gi|182667987|gb|EDT79966.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916] gi|322804327|emb|CBZ01877.1| thymidylate kinase [Clostridium botulinum H04402 065] Length = 231 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111 EFG + +++ +A R + ++G I++ DR+ S+ +Q + Sbjct: 58 EFGRDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDV 117 Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139 ++ FL+ L + ++ +PDC I LD+P Sbjct: 118 QAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149 >gi|260685068|ref|YP_003216353.1| putative thymidylate kinase [Clostridium difficile CD196] gi|260688726|ref|YP_003219860.1| putative thymidylate kinase [Clostridium difficile R20291] gi|260211231|emb|CBA66748.1| putative thymidylate kinase [Clostridium difficile CD196] gi|260214743|emb|CBE07430.1| putative thymidylate kinase [Clostridium difficile R20291] Length = 234 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L I G + +GK T +L L+++ Y + P + A + L Sbjct: 6 MKGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 62 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109 +FG A + F A R + EG I++ DR+ S+ +Q + Sbjct: 63 DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDIC 122 Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150 D ++L + E ++ ++ PDC I LD+P++ K ++NR Sbjct: 123 DREEYLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENR 164 >gi|48478173|ref|YP_023879.1| thymidylate kinase [Picrophilus torridus DSM 9790] gi|73920826|sp|Q6L016|KTHY_PICTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|48430821|gb|AAT43686.1| putative thymidylate kinase [Picrophilus torridus DSM 9790] Length = 202 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 23/173 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N +FI+ EGI+G+GKTT + + ++TREP + + Sbjct: 4 NGSMFIAIEGIDGSGKTTLAGDIASYTG-----FYLTREPTDRFCYDYIEA--------D 50 Query: 62 FGAEAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHL 115 + E+ I F LD + I+ L+ G ++ DR++ SS AYQG +R + Sbjct: 51 YNDESSIINFFLFTLDRYMHQKEIKNHLING--VISDRYVFSSIAYQGSGMEKRFKNMDE 108 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + + ++S +MPD I L + I LKR+ R + E D FER +++ Sbjct: 109 TISWMLDVSRFIIMPDLIIYLKIDPGIALKRLNLRKN--EKKNTDAFERLEML 159 >gi|329122084|ref|ZP_08250692.1| thymidylate kinase [Dialister micraerophilus DSM 19965] gi|327466891|gb|EGF12407.1| thymidylate kinase [Dialister micraerophilus DSM 19965] Length = 224 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LSCG 58 G I EGI+G+GK T LL L++ N V VT + ++ + L Sbjct: 2 GGKLIVLEGIDGSGKATQSELLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 ++ A ++ +A R + + +G I++ DR+ S+ +Q + + + Sbjct: 62 PEDVNPYAASMFYAVDRFASYKMKWKKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121 Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 FL L+E + + PD I+LD+P++I K V+ R Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKER 159 >gi|306821414|ref|ZP_07455019.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550536|gb|EFM38522.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 217 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 34/200 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGAEAEAI 69 G + GK T +LL L++ N + V P ++A L+ ++ +FG E + Sbjct: 10 GSDACGKATQSNLLYTHLKKDNKVLKVE-----FPNYKSATSSLVKMYLNGDFGKNPEDV 64 Query: 70 -------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDS--SQHLFLDS 119 FAA R + I + I++ DR+ S+ YQ G+ D ++ FLD Sbjct: 65 NPYITSTFFAADRYATFKTEIEKYYNDDYIIIADRYTTSNMVYQAGKYDDIDEKNKFLDW 124 Query: 120 LQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L E ++ E+ PD LDLP +I K ++NR S+++ DV IHE R Sbjct: 125 LYDFEFNLYELPKPDKVFFLDLPFEISYKLMKNR-SVKKGV--------DVDIHENSRDY 175 Query: 177 FLDIARN------QPDRCHI 190 + N + CHI Sbjct: 176 LEKVYENAKFVAEKYGWCHI 195 >gi|153940357|ref|YP_001389419.1| putative thymidylate kinase [Clostridium botulinum F str. Langeland] gi|152936253|gb|ABS41751.1| putative thymidylate kinase [Clostridium botulinum F str. Langeland] gi|295317529|gb|ADF97906.1| putative thymidylate kinase [Clostridium botulinum F str. 230613] Length = 231 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 16/152 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MQRGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111 EFG + +++ +A R + ++G I++ DR+ S+ +Q + Sbjct: 58 EFGRDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDV 117 Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139 ++ FL+ L + ++ +PDC I LD+P Sbjct: 118 QAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149 >gi|284992962|ref|YP_003411516.1| major facilitator superfamily protein [Geodermatophilus obscurus DSM 43160] gi|284066207|gb|ADB77145.1| major facilitator superfamily MFS_1 [Geodermatophilus obscurus DSM 43160] Length = 727 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 23/157 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-------- 55 GLFI EG + + + L + L+ V VT EP T R +L Sbjct: 482 GLFIVVEGADRELTRRYAADLAQVLRDCGCPVEVTSEPSDTQLGRQVRGLLFPPPPGSGT 541 Query: 56 -----SCGVDE----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 VD+ GA A++ AA R HV VIRPAL ++++ ++D+S A+ Sbjct: 542 GFPQPEPAVDDTGSPIGAHTAALLAAADRAQHVAAVIRPALERRRVVVNTHYVDTSIAFH 601 Query: 107 GERDSSQHLFLDSLQEISV---QEVMPDCTIILDLPV 140 G + Q L D + S+ + ++PD T+++D PV Sbjct: 602 G---AGQGLDADRIFRTSLWATRGLLPDLTVVVDSPV 635 >gi|257057529|ref|YP_003135361.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] gi|256587401|gb|ACU98534.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] Length = 642 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GL I EG A + L ++L + V + +P A + R L G Sbjct: 439 NGLLIVLEGTTAADTAAQAAHLAQWLGSGSQRVVLAADP----ALDDERLTSLMSGAALT 494 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA A+A+ AA R D VE +RPAL EG I++ +RF+D+ A+ L+ L + Sbjct: 495 GARAKALAAAAVRADIVERNVRPALDEGAIVVMERFVDTPLAHLSAMAGLDATELEGLTD 554 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD D G Q+ + H + ++I ++A Sbjct: 555 WATGALRPDLTVLLD--ADPGEASEQSTSTAEH--------------HWRVQEILAEMAA 598 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + PDR +VD+ + VA + V E + +V+ Sbjct: 599 SAPDRYVVVDAEGTEAEVAERVRVSVSEALSGKVA 633 >gi|226305654|ref|YP_002765614.1| thymidylate kinase [Rhodococcus erythropolis PR4] gi|226184771|dbj|BAH32875.1| putative thymidylate kinase [Rhodococcus erythropolis PR4] Length = 213 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 10/186 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G ++ EG++GAGK T I ++ L+R + P G + A+ A L D Sbjct: 2 GTLVALEGLDGAGKRTLIGKVETELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115 A A++FA R + I L I+L DR++ S+ AY R D Sbjct: 62 AESVNAMAVLFALDRAGAADR-ISELLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ L+ + PD + LD+PV + +R ++R + S LD +ER D + + + Sbjct: 121 WIRELELGRLALPAPDLQLYLDVPVALAEQRARSREAQDASRQLDAYER-DGGLQARTGE 179 Query: 176 IFLDIA 181 ++ +A Sbjct: 180 LYKQLA 185 >gi|310830106|ref|YP_003962463.1| putative thymidylate kinase [Eubacterium limosum KIST612] gi|308741840|gb|ADO39500.1| putative thymidylate kinase [Eubacterium limosum KIST612] Length = 228 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 16/162 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G I EG++G+GK T L L+R+ V P A+ A + LS Sbjct: 3 NKGQLIVIEGVDGSGKQTQTEKLYDRLKREGQRVMKVSYPRYDKASSAMVRLYLSGA--- 59 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSS 112 FG + ++I +AA R + +G I++ DR+ S+ +Q + D Sbjct: 60 FGNDPDSISPYIASTFYAADRYASYKEDYETFYRDGGIVIADRYTTSNMVHQAGKISDPE 119 Query: 113 QHL-FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 + + F+D L + ++ +PD L++P +I K ++ R Sbjct: 120 ERVRFMDWLSDYEFNKMELPVPDAVFFLNIPPEINFKLMEGR 161 >gi|148378062|ref|YP_001252603.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC 3502] gi|153932140|ref|YP_001382461.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC 19397] gi|153937766|ref|YP_001386013.1| putative thymidylate kinase [Clostridium botulinum A str. Hall] gi|148287546|emb|CAL81610.1| thymidylate kinase [Clostridium botulinum A str. ATCC 3502] gi|152928184|gb|ABS33684.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC 19397] gi|152933680|gb|ABS39179.1| putative thymidylate kinase [Clostridium botulinum A str. Hall] Length = 231 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 10/149 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQ 113 D A + +A R + ++G I++ DR+ S+ +Q + ++ Sbjct: 61 RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLP 139 FL+ L + ++ +PDC I LD+P Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149 >gi|255657498|ref|ZP_05402907.1| putative thymidylate kinase [Clostridium difficile QCD-23m63] Length = 229 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L I G + +GK T +L L+++ Y + P + A + L Sbjct: 1 MKGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109 +FG A + F A R + EG I++ DR+ S+ +Q + Sbjct: 58 DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVC 117 Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150 D ++L + E ++ ++ PDC + LD+P++ K ++NR Sbjct: 118 DREKYLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENR 159 >gi|313891688|ref|ZP_07825295.1| dTMP kinase [Dialister microaerophilus UPII 345-E] gi|313119966|gb|EFR43151.1| dTMP kinase [Dialister microaerophilus UPII 345-E] Length = 224 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 10/158 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LSCG 58 G I EGI+G+GK T LL L++ N V VT + ++ + L Sbjct: 2 GGKLIVLEGIDGSGKATQSQLLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 ++ A ++ +A R + +G I++ DR+ S+ +Q + + + Sbjct: 62 PEDVNPYAASMFYAVDRFASYKMKWEKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121 Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 FL L+E + + PD I+LD+P++I K V+ R Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKER 159 >gi|296449094|ref|ZP_06890884.1| thymidylate kinase [Clostridium difficile NAP08] gi|296879917|ref|ZP_06903890.1| thymidylate kinase [Clostridium difficile NAP07] gi|296262187|gb|EFH08992.1| thymidylate kinase [Clostridium difficile NAP08] gi|296429206|gb|EFH15080.1| thymidylate kinase [Clostridium difficile NAP07] Length = 234 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L I G + +GK T +L L+++ Y + P + A + L Sbjct: 6 MKGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKG--- 62 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109 +FG A + F A R + EG I++ DR+ S+ +Q + Sbjct: 63 DFGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVC 122 Query: 110 DSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNR 150 D ++L + E ++ ++ PDC + LD+P++ K ++NR Sbjct: 123 DREKYLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENR 164 >gi|325066507|ref|ZP_08125180.1| thymidylate kinase [Actinomyces oris K20] Length = 63 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/41 (58%), Positives = 28/41 (68%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT 44 GLFISFEG +G GKTT I +L L + D +TREPGGT Sbjct: 21 GLFISFEGGDGVGKTTQIRILADLLTAADVDHILTREPGGT 61 >gi|170761117|ref|YP_001785385.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch Maree] gi|169408106|gb|ACA56517.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch Maree] Length = 231 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 16/152 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111 EFG + +++ +A R + +G I++ DR+ S+ +Q + Sbjct: 58 EFGMDPDSVNPYASSTFYAVDRFASYKKDWEEFYQKGGIIIADRYTTSNMIHQAAKIKDV 117 Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLP 139 ++ FL+ L + ++ +PDC I LD+P Sbjct: 118 QAKDNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149 >gi|288559843|ref|YP_003423329.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1] gi|288542553|gb|ADC46437.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1] Length = 196 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 30/216 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDEFG 63 ++I EGI+GAGK+T I+ LK +L+ + V EP R +L S + Sbjct: 1 MYIVLEGIDGAGKSTQINYLKGWLEDNGFKVETIVEPTDLEVGNLIRQLLTRSDATSDTM 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++FAA RL ++ I E +++ DR SS YQ + D ++EI Sbjct: 61 QKTLGLLFAADRLVLMDK-IEKLESERTVVISDRSFYSSLVYQKPQ--------DWIREI 111 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +P + L + + S+ D FE ++ + K +L ++R Sbjct: 112 NK---------FAKIPDLVLLLDLDVKKSVERCDGTDEFENEEFLTGVKEN--YLALSR- 159 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + D I+D+ + VA++I +K V+PL Sbjct: 160 ENDNFKIIDANNGPNKVASDI--------KKAVAPL 187 >gi|15898045|ref|NP_342650.1| thymidylate kinase related protein [Sulfolobus solfataricus P2] gi|13814386|gb|AAK41440.1| Thymidylate kinase related protein [Sulfolobus solfataricus P2] Length = 208 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 11/98 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60 L I+FEGIEG+GKT+H+ K++L+++ Y V + G A+ R+++ Sbjct: 4 LIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 F + + D +EN ++P++ G I L D + Sbjct: 58 -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGY 94 >gi|226365793|ref|YP_002783576.1| thymidylate kinase [Rhodococcus opacus B4] gi|226244283|dbj|BAH54631.1| thymidylate kinase [Rhodococcus opacus B4] Length = 227 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 12/187 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G I+ EG++GAGK T + + L + V P G + A+ A L D Sbjct: 2 GTLIALEGLDGAGKRTLVGAVVDRLTERGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQHLFL 117 A A++FA R V + L+ G +++ DR++ S+ AY R ++ F+ Sbjct: 62 AESVHAMAVMFALDRSGAVGEL--SDLLAGHDLVILDRYVASNAAYGAARLHQAADGEFV 119 Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ + + + PD + LD+PV + +R + R S S LD +ER D + E+ Sbjct: 120 GWVENLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTG 178 Query: 175 QIFLDIA 181 +++ ++A Sbjct: 179 EVYRELA 185 >gi|262089274|gb|ACY24495.1| thymidylate kinase [uncultured crenarchaeote 57a5] Length = 245 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 26/167 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-------GTPAAEAARHVLLS 56 G FI EG + +G++T I LL L+ D H G G EA R+ +L Sbjct: 34 GRFIIIEGPDASGRSTQIELLSSKLEA---DGHAVLNAGLRRSELIGQGILEAKRNFVL- 89 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + ++ +AA D +EN I P L G ++L DR++ + A + R S + Sbjct: 90 ------GRKTISLFYAADFADQLENKIIPGLRAGYVVLSDRYIYTLMAREAVRGISSS-W 142 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 ++L +++ PD LD+ + + RV ++++ LDY+E Sbjct: 143 SNNLYGFALR---PDIVFYLDVDPNELVHRV-----FKKNSYLDYYE 181 >gi|227541887|ref|ZP_03971936.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182330|gb|EEI63302.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866] Length = 205 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 16/210 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS-CGVDE 61 + ++ EGI+GAGK T L++ L KN D P + AA+ AR L G Sbjct: 1 MILAVEGIDGAGKNT---LVRDLL--KNIDAETLSFPRYSTSDAAKLARKALYGRMGDMT 55 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFL 117 A A +FA R E + + A + IL+ DR++ S+ AY R D++Q ++ Sbjct: 56 ESPYAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYD 115 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 E+ + + P I+L+ P + +R ++R D +E +D + + + Sbjct: 116 LEYGELGLPK--PALQILLETPASVAQERAESRARAERDRAKDTYE-QDSSLQVRTSVAY 172 Query: 178 LDIARNQ-PDRCHIVDSAHSFQSVATNILN 206 +AR Q IV + Q ILN Sbjct: 173 RRLARGQWASPWLIVPHTTTPQEATEEILN 202 >gi|256419682|ref|YP_003120335.1| thymidylate kinase [Chitinophaga pinensis DSM 2588] gi|256034590|gb|ACU58134.1| thymidylate kinase [Chitinophaga pinensis DSM 2588] Length = 228 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 15/191 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCG 58 N+ FI+ EG++GAGK+T I+LL++F ++ + P G A+ + G Sbjct: 3 NNSRFIAIEGLDGAGKSTQINLLQQFFNQQGIETRFVHFPIVQEGVFGEMIAKFLRGEFG 62 Query: 59 -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114 V + + A++FA R + I L G ++L DR++ S+ A+Q + D + Sbjct: 63 DVKDVHPQLVALLFAEDR-KAFSHTINEWLASGYVVLVDRYVLSNIAFQCAKLKTDKEKQ 121 Query: 115 LFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 D + E + PD ++ LD+P + + R R Y KD IHE Sbjct: 122 ELRDWINMFEYEYNRIPQPDLSVYLDVPFSHTEQALARR---RSGEDRKYLNGKD-DIHE 177 Query: 172 KRRQIFLDIAR 182 K + L + R Sbjct: 178 KDFSLQLAVKR 188 >gi|229489508|ref|ZP_04383371.1| thymidylate kinase [Rhodococcus erythropolis SK121] gi|229323605|gb|EEN89363.1| thymidylate kinase [Rhodococcus erythropolis SK121] Length = 213 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 9/169 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G ++ EG++GAGK T I ++ L+R + P G + A+ A L D Sbjct: 2 GTLVALEGLDGAGKRTLIGKVESELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115 A A++FA R + I L I+L DR++ S+ AY R D Sbjct: 62 AESVNAMAVLFALDRAGAADR-ISDLLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 ++ L+ + PD + LD+PV + +R ++R + S LD +ER Sbjct: 121 WVRELELGRLALPAPDLQLYLDVPVALAEQRARSREAEDASRQLDAYER 169 >gi|118351574|ref|XP_001009062.1| thymidylate kinase family protein [Tetrahymena thermophila] gi|89290829|gb|EAR88817.1| thymidylate kinase family protein [Tetrahymena thermophila SB210] Length = 211 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 6/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI FEG++ GKT+ L FL+ + R P T + L G Sbjct: 5 GLFIVFEGLDRCGKTSQCENLVNFLKESGKKAIMKRYPDRTTTIGQTINNYLQ-GKQNLS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A ++F+A R + E I+ L EG ++CDR+ S Y S++ ++ + Sbjct: 64 DQAIHLIFSANRWEQQEE-IKKILDEGTNIVCDRYCYSGAVYT----SAKGYDIEWCKNP 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + PD + L P ++ KR Sbjct: 119 DKGLIKPDIVLYLHAPKEVISKR 141 >gi|72392843|ref|XP_847222.1| thymidylate kinase [Trypanosoma brucei TREU927] gi|62358480|gb|AAX78942.1| thymidylate kinase, putative [Trypanosoma brucei] gi|70803252|gb|AAZ13156.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 345 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGT-PAAEAARHVLLS--CGVDEF 62 I FEG +GAGK T +++ L ++ H + + P + R VL + + Sbjct: 131 IVFEGGDGAGKATQTEYMRKRLDKEG-KAHASLDFPSDKHRYGKLIRKVLSGERGALHDL 189 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSL 120 + +++F+ R D + +R L GK +L DR+ S++ +Q + +S + F+ L Sbjct: 190 DPKLFSLLFSLNRFDTLPE-LRYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHL 248 Query: 121 QEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ ++ + PD + LDLP L +Q R RES LD E + E RQ + Sbjct: 249 EQLELEWLKLPPPDVALYLDLPPAAALVAMQ-RDEKRES--LDIHETAGLSYKENVRQTY 305 Query: 178 LDIARNQPDRCHI 190 + +NQ + I Sbjct: 306 VWCCQNQRNWVQI 318 >gi|229583123|ref|YP_002841522.1| thymidylate kinase related protein [Sulfolobus islandicus Y.N.15.51] gi|228013839|gb|ACP49600.1| thymidylate kinase related protein [Sulfolobus islandicus Y.N.15.51] Length = 208 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 12/102 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLS 56 MN+ L I+FEGIEG+GKT+H+ K++L+++ Y V + G + R++L Sbjct: 1 MNT-LIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIL-- 57 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 F + + D +EN + P++ G I L D + Sbjct: 58 -----FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 94 >gi|300853347|ref|YP_003778331.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528] gi|300433462|gb|ADK13229.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528] Length = 227 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 20/202 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 + G I EG +G+GK T L + L +NY++ P + A + L+ Sbjct: 3 LQKGKLIVIEGCDGSGKATQTEKLYKRLLNENYNLKKIEYPNYNSESSALVRMYLNGDFG 62 Query: 60 ---DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQ 113 ++ A A + +A R + + G I+L DR+ ++ +Q + + Sbjct: 63 KKPEDVSAYAASTFYAVDRFASYKMEWKKFYENGGIILADRYTTANMIHQASKIDDLEEK 122 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + FL L +PDC I LD+P + K + R + KD IH Sbjct: 123 NKFLKWLWNFEFDIFRLPVPDCVIFLDMPPEYSKKLMTKRNNKFTGNA-----EKD--IH 175 Query: 171 EKRRQIFLDIARNQPDRCHIVD 192 E+ + ++ +N HIVD Sbjct: 176 ERDYEYLVNSYKNA---IHIVD 194 >gi|197294494|ref|YP_001799035.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853821|emb|CAM11765.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 195 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 20/159 (12%) Query: 42 GGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS 101 G + + R++ L + + + ++ A L + +I PAL+ G ++L DR+ S Sbjct: 15 GSSIVGKEIRNLFLHQS--KISPKTKYLLSLANMLQTQDELIFPALLSGYLVLVDRWYGS 72 Query: 102 SYAYQGERDSSQHLFLDSLQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 ++AYQ + + ++D +I+ + + P T LD+ IG++R QN+ + + Sbjct: 73 TFAYQSKGN-----YIDYDDKITSKIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK-- 125 Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH 195 LD ERK + E R+ +L NQ C+ + H Sbjct: 126 --LDLIERKPLNYFENVRKHYL----NQHKYCNDANCNH 158 >gi|325675694|ref|ZP_08155378.1| thymidylate kinase [Rhodococcus equi ATCC 33707] gi|325553665|gb|EGD23343.1| thymidylate kinase [Rhodococcus equi ATCC 33707] Length = 222 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 10/186 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G+ I+ EG++GAGK T + + L+ DV P G + A+ A L D Sbjct: 2 GMLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R + +R + +++ DR++ S+ AY R + F+ Sbjct: 62 SASVHAMAVMFALDRAGAADR-LRDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVG 120 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + + PD + LD+PV + +R + R + S LD +E KD + + + Sbjct: 121 WIENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYE-KDSGLQARTGE 179 Query: 176 IFLDIA 181 ++ ++A Sbjct: 180 VYRELA 185 >gi|45358597|ref|NP_988154.1| thymidylate kinase [Methanococcus maripaludis S2] gi|59798295|sp|Q6LYF7|KTHY_METMP RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|44921355|emb|CAF30590.1| Thymidylate kinase [Methanococcus maripaludis S2] Length = 199 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 14/145 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G GKTT L+ L + + T EP ++ R +L ++ E Sbjct: 4 FIVFEGIDGCGKTTQAKLVAEKL-----NANFTFEPTDGKIGKSIREILAGSKCNK---E 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FAA R++HV + ++ ++ DR++ SS YQ +Q + D + +I+ Sbjct: 56 TLALLFAADRVEHVSKIEED--LKNAHVVSDRYVYSSIVYQ----MTQGIPKDFIYKIND 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150 +PD ++LD+ ++ LKR+++R Sbjct: 110 YAKIPDLVVLLDVDLNEALKRMESR 134 >gi|310779557|ref|YP_003967890.1| thymidylate kinase [Ilyobacter polytropus DSM 2926] gi|309748880|gb|ADO83542.1| thymidylate kinase [Ilyobacter polytropus DSM 2926] Length = 223 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/160 (23%), Positives = 69/160 (43%), Gaps = 16/160 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG + +GK T +L L+ + V P A A + L+ EFG Sbjct: 2 GKLIVIEGTDSSGKQTQTEILYEKLKSQGIKVKKISFPNYDSPASAPVKMYLAG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-- 114 +A + ++A R + +E +++ DR+ S+ +Q + + H Sbjct: 59 KKANEVNPYPVSTMYAVDRYASFKKDWEDFYLEAGVVITDRYTTSNMVHQASKFTDPHEK 118 Query: 115 -LFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 +LD L+++ ++ PD L++PVD+ K + +R Sbjct: 119 VKYLDWLEDLEYDKMEIPKPDLVFFLNMPVDVAQKLMSDR 158 >gi|298709115|emb|CBJ31061.1| conserved unknown protein [Ectocarpus siliculosus] Length = 228 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G FI FEG++ GKTT +LL L++ +D R P TP L + + Sbjct: 15 GAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLRN--TTDI 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + E+ IR L G ++CDR+ S A+ S L + ++ Sbjct: 73 DDRCVHLLFSANRWE-AESKIRELLKAGTTVVCDRYAYSGVAFSA---SKPGLSVRWCKD 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRE 155 PD + LD+ V+ +KR Q RY E Sbjct: 129 PDRGLPAPDKILFLDISVEDAMKRGQFGEERYEKEE 164 >gi|284175898|ref|ZP_06389867.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2] gi|261602757|gb|ACX92360.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2] Length = 205 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 11/98 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60 + I+FEGIEG+GKT+H+ K++L+++ Y V + G A+ R+++ Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 F + + D +EN ++P++ G I L D + Sbjct: 55 -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGY 91 >gi|253581348|ref|ZP_04858574.1| dTMP kinase [Fusobacterium varium ATCC 27725] gi|251836712|gb|EES65246.1| dTMP kinase [Fusobacterium varium ATCC 27725] Length = 232 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 20/162 (12%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG + +GK T L +R L K Y+V P +PA E + L + Sbjct: 11 GKLIVIEGTDSSGKETQTKKLFERLLNEK-YNVKKISFPNYDSPACEPVKMYLAG----K 65 Query: 62 FGAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A ++++A R + E I++ DR++ S+ +Q + ++ Sbjct: 66 FGEDAMKVNPYPVSMMYAIDRYASYKMDWEKFYQEDGIIVTDRYVTSNMVHQASKIIDET 125 Query: 112 SQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 ++++L+ L E+ ++ PD I L++P ++ LK ++ R Sbjct: 126 EKNVYLNWLDELEYDKMDIPRPDLVIFLNMPTEMALKLMEER 167 >gi|302338530|ref|YP_003803736.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293] gi|301635715|gb|ADK81142.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293] Length = 206 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 20/208 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + FEG++GAG TT LL + K V +T EP + R VL G + E Sbjct: 10 YTVFEGLDGAGTTTQALLLADRCKLKGKAVQLTFEPTASEIGVVIRKVL--AGQLPYHPE 67 Query: 66 AEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +F A R +H+ + I L + ++ DR+L SS AYQ S + D + EI Sbjct: 68 TLARLFVADRYEHLFGKGGILSLLDKHIAVIGDRYLFSSLAYQ-----SLDVDFDIVYEI 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LDI 180 + +P+ I +DL + +R+ +R D FE + + ++ R+ + LD Sbjct: 123 NSMFPLPERLIYIDLAPEECERRMSDRDQ------RDIFE--TLALQKRVRERYEHTLDR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 + H +D A + + +A + +IV Sbjct: 175 YVKSGMKIHRLDGALAKEELAEKVWSIV 202 >gi|156096007|ref|XP_001614038.1| thymidylate kinase [Plasmodium vivax SaI-1] gi|148802912|gb|EDL44311.1| thymidylate kinase, putative [Plasmodium vivax] Length = 219 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 11/146 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAE-AARHVLLSCGVDE 61 G FI FEG++ +GK+T LL L+RKN +V H+ TP + A+++ + + Sbjct: 16 GKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQS---D 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 E ++F+A R + + + R L G ++CDR+ S AY G S+ ++ Sbjct: 73 MTNETIHLLFSANRWELMGEIKR-LLASGVWVVCDRYAYSGVAYSAGALKLSKTWCMNPD 131 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146 Q + + PD L++P + R Sbjct: 132 QGL----IKPDVVFYLNVPPNYAQNR 153 >gi|321455804|gb|EFX66927.1| hypothetical protein DAPPUDRAFT_331571 [Daphnia pulex] Length = 212 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 6/139 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG + +GKTT R+LQ N + H+ R P + + + L C E Sbjct: 5 GALIVLEGCDRSGKTTQCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECST-ELD 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + + + I+ L +G ++ DR+ S A+ S ++ L Q+ Sbjct: 64 DHAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSA---SKPNMDLRWCQQS 119 Query: 124 SVQEVMPDCTIILDL-PVD 141 + PD I LD+ PV+ Sbjct: 120 DSGLLKPDLVIFLDINPVE 138 >gi|134045602|ref|YP_001097088.1| thymidylate kinase [Methanococcus maripaludis C5] gi|166221754|sp|A4FXE4|KTHY_METM5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|132663227|gb|ABO34873.1| dTMP kinase [Methanococcus maripaludis C5] Length = 199 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 14/145 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G GKTT L+ L K T EP ++ R +L + E Sbjct: 4 FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREILSGSQCQK---E 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FAA R++HV N+ ++ ++ DR++ SS YQ SQ + D + I+ Sbjct: 56 TLALLFAADRVEHVFNIEED--LKKSHVVSDRYVYSSIIYQ----ISQGISKDFIYTIND 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150 PD ++LD+ ++ LKR+++R Sbjct: 110 YAKTPDLVVLLDVDLNEALKRMESR 134 >gi|146303757|ref|YP_001191073.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula DSM 5348] gi|145702007|gb|ABP95149.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula DSM 5348] Length = 213 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 16/151 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCG 58 G I+FEGI+G+GK++ LLK +L + D ++T EA + LL+ Sbjct: 2 GGSIIAFEGIDGSGKSSQAKLLKDWLDSR-VDAYLTEWNSSDWIHEVIKEAKKKNLLT-- 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ A D E +I P G +++ DR+ ++YA RDS + + L+ Sbjct: 59 -----PLTFSLIHATDFADRYERLILPMYRTGFVVVSDRYYYTAYA----RDSVRGVSLE 109 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 ++++ PD T + + ++ L R++ Sbjct: 110 WVKKLYSYAPKPDITFFIRVTPEVALSRLKE 140 >gi|302410089|ref|XP_003002878.1| thymidylate kinase [Verticillium albo-atrum VaMs.102] gi|261357902|gb|EEY20330.1| thymidylate kinase [Verticillium albo-atrum VaMs.102] Length = 285 Score = 48.9 bits (115), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 40/238 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 + G + EG++ +GKTT + LL++ V V R P TP + L S Sbjct: 50 ITRGALVILEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRSTPIGQMIDAYLKSS-- 107 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E ++F+A R + V+ IR L G +LCDR+ S Y + + L L Sbjct: 108 VEMDDHVIHLLFSANRWEAVKT-IRQLLASGTTVLCDRYYHSGIVYSAAKHNPS-LSLHW 165 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + V PD + LDL + R + +ER + + + R++F Sbjct: 166 ARAPDVGLPRPDLVLFLDLD--------EATAKSRGGWGGELYERGE--MQRRVRELFWG 215 Query: 180 IA---------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +A R + + +VD+ S + VA I WE VQ RV Sbjct: 216 LAMGRIGADGGLGDEDRRVDREFRQEEEDLVVVDAGASVEEVAEGI----WEKVQPRV 269 >gi|326383262|ref|ZP_08204950.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395] gi|326198012|gb|EGD55198.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395] Length = 209 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 9/179 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G+ ++ EG++GAGK T + ++ + V P G + A+ A L D Sbjct: 2 GILVAVEGLDGAGKRTIVGRIEAAATDRGASVSTLAFPRYGESITADLASEALHGRHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115 A A++FA R +R AL +++CDR+ S+ AY R DS Sbjct: 62 RESVYAMALLFALDRA-AARRQLREALTAHDLVICDRYCASNAAYSAARLGGGADSEVVE 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ L+ Q +PD ++L +P D+ + R R +D +ER + H R Sbjct: 121 WVADLEFGRFQLPVPDHQLLLGVPPDVAMSRANGRAETDADRPVDSYERDAELQHAVYR 179 >gi|158318239|ref|YP_001510747.1| thymidylate kinase [Frankia sp. EAN1pec] gi|158113644|gb|ABW15841.1| thymidylate kinase [Frankia sp. EAN1pec] Length = 241 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 18/193 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE- 61 + ++ EG++GAGK T S L + P P A R +L DE Sbjct: 31 MIVAIEGVDGAGKNTLTSRLVEAVTATGRTAGTFAFPRYAAGPLGTAVRAMLDG---DER 87 Query: 62 -----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114 A A A++FA R + + + R + +L+ DR+L S+ AY R + Sbjct: 88 LAGLAGSARATALLFALDRANALPELAR-CVAAYDVLIVDRYLGSNAAYGAARLPAPERA 146 Query: 115 LFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FLD + E+ + + PD ++LD+PV+ + R + + LD FE D + Sbjct: 147 EFLDWIAELELTRLGLPRPDLQVLLDVPVETARAGARARAAEDTARALDTFE-SDAGLQA 205 Query: 172 KRRQIFLDIARNQ 184 + +I+L +A + Sbjct: 206 RCAEIYLSLAADS 218 >gi|330836556|ref|YP_004411197.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374] gi|329748459|gb|AEC01815.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374] Length = 215 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 15/165 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG++G+G TT + +L V T EP G P R L V Sbjct: 9 WIVLEGLDGSGTTTQSERICHWLDELEVPVIPTCEPTGGPIGRLIRSFLRKEAVT--TPL 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A ++AA R DH+ N + K +++ DR+ SS AYQ S + +++ + Sbjct: 67 AIAGLYAADRDDHLHNPQTGLALHHKDSLIISDRYFYSSLAYQ-----SVQVPFETVSMM 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + + P I +D PV+I L R++ R A + FE K+ + Sbjct: 122 N-RYPHPRYLIYIDTPVEICLARMKKR-----GAAQELFEYKEYL 160 >gi|313229292|emb|CBY23878.1| unnamed protein product [Oikopleura dioica] Length = 212 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 26/231 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG++ +GK+T I + + K +VH+TR P T + L D Sbjct: 1 MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +A ++F+A R +H ++++ + G +L DR+ S A+ +++ L L+ Sbjct: 61 -LSDQAIHLLFSANRWEHAQSILN-YMNNGTSVLVDRYAFSGVAFT----AAKGLDLEWC 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + PD + LD+ + KR + RY E F+R + R+++ Sbjct: 115 KNPDRGLPKPDLVLQLDVDEETAKKRGGFGEERYEKVE------FQR-------QVRKLY 161 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224 + D I+D++ S + + N V E ++ K + L K+D Sbjct: 162 SQLREEHSDIWKIIDASASVDELTPALQNHVDETIKSCQNKDIEKLWIKRD 212 >gi|220918549|ref|YP_002493853.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1] gi|219956403|gb|ACL66787.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1] Length = 567 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 4/150 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 + +SFEGI+G+GKT +L+ L+ +V RE G T AA R + + E Sbjct: 1 MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + A +E V+RPAL G + + DR L S A +++ Sbjct: 61 SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAIAGRGLPRAEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 + PD +++D VD L R++ R Sbjct: 121 AASGGTWPDLAVLVD--VDPDLARLRKRVG 148 >gi|159906007|ref|YP_001549669.1| dTMP kinase [Methanococcus maripaludis C6] gi|238686994|sp|A9AAR4|KTHY_METM6 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|159887500|gb|ABX02437.1| dTMP kinase [Methanococcus maripaludis C6] Length = 199 Score = 48.5 bits (114), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 14/145 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G GKTT L+ L K T EP ++ R +L + E Sbjct: 4 FIVFEGIDGCGKTTQAKLIAERLNAK-----FTFEPTDGKIGKSIREILSGSKCQK---E 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FAA R++HV I L + I + DR++ SS YQ SQ + D + I+ Sbjct: 56 TLALLFAADRVEHVSK-IEEDLKKSHI-VSDRYVYSSIVYQ----MSQGIPKDFIYTIND 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150 PD ++LD+ ++ LKR+++R Sbjct: 110 YAKTPDLVVLLDVDLNEALKRMESR 134 >gi|197123784|ref|YP_002135735.1| thymidylate kinase [Anaeromyxobacter sp. K] gi|196173633|gb|ACG74606.1| thymidylate kinase [Anaeromyxobacter sp. K] Length = 567 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 4/150 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 + +SFEGI+G+GKT +L+ L+ +V RE G T AA R + + E Sbjct: 1 MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + A +E V+RPAL G + + DR L S A +++ Sbjct: 61 SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 + PD +++D VD L R++ R Sbjct: 121 AASGGTWPDLAVLVD--VDPDLARLRKRVG 148 >gi|317056618|ref|YP_004105085.1| thymidylate kinase [Ruminococcus albus 7] gi|315448887|gb|ADU22451.1| thymidylate kinase [Ruminococcus albus 7] Length = 218 Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 19/186 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LSCGVDE 61 I EG++G+GK+T L + + K+ + P P++ + L ++ + Sbjct: 5 LIVLEGLDGSGKSTQFEKLSEYFKNKDVKLKAISFPDYEDPSSTLVKMYLNGEIAGSAEA 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHL-F 116 A A + +A+ R + +G ++L R++ S+ YQ E + +L + Sbjct: 65 VNAYAASSFYASDRYISYKKYWEKDYNDGCLILAARYVTSNCIYQMTKLPEDEWENYLAW 124 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+ + + PD I LD+P++I + + RY ES +KD IHEK + Sbjct: 125 LEDYEYCKLSLPKPDKVIFLDMPIEISQRLLSARYGGDES-------KKD--IHEKNIE- 174 Query: 177 FLDIAR 182 FL + R Sbjct: 175 FLHMCR 180 >gi|119953569|ref|YP_945779.1| thymidylate kinase [Borrelia turicatae 91E135] gi|119862340|gb|AAX18108.1| thymidylate kinase [Borrelia turicatae 91E135] Length = 202 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L++ K + T+EP E R L + + Sbjct: 8 FYCIEGIDGSGKTSIIQKLQKLCNNK-LKYYFTKEPSQGVIGEFIRQQLTNFK-NPLRKV 65 Query: 66 AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108 + A ++ A R +H+ N I L +GK ++ DR+L SS AYQGE Sbjct: 66 SLAYLYVADRYEHLYNTKNGIIEILNKGKTKVITDRYLFSSIAYQGE 112 >gi|116805956|emb|CAL26357.1| CG5757 [Drosophila melanogaster] gi|116805970|emb|CAL26364.1| CG5757 [Drosophila melanogaster] gi|223967375|emb|CAR93418.1| CG5757-PA [Drosophila melanogaster] gi|223967383|emb|CAR93422.1| CG5757-PA [Drosophila melanogaster] Length = 211 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P N + R + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFDRICSK 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I NI EL+ K Sbjct: 171 EGSYFHQFDARQSVEDLHAQIANITEELLPK 201 >gi|288917903|ref|ZP_06412263.1| thymidylate kinase [Frankia sp. EUN1f] gi|288350692|gb|EFC84909.1| thymidylate kinase [Frankia sp. EUN1f] Length = 214 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 6/151 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAE 65 I+ G++G+GKTT L +L + GG P +A AR + + G FG Sbjct: 7 IALLGVDGSGKTTQARRLAVWLNGQGVPARYFENAGGRPIWDALARRLDRADGQALFGRR 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEIS 124 A V A+ R V + + + G++ + DR+ YA R D + + + Sbjct: 67 AYVAVEASMRWVAVSRALALSWLTGRVAVMDRYAYCQYAIMRARGDRGERRVRGAFRRFP 126 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 PD L +P + +RV+ R RE Sbjct: 127 A----PDLVCYLSVPAGLAQRRVEQRGRDRE 153 >gi|258611590|ref|ZP_05233832.2| thymidylate kinase [Listeria monocytogenes FSL N3-165] gi|258601555|gb|EEW14880.1| thymidylate kinase [Listeria monocytogenes FSL N3-165] Length = 111 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 6/108 (5%) Query: 99 LDSSYAYQGE-RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 +DSS AYQG RD + L + ++++ +PD T LD+P ++GL R+ RE Sbjct: 1 MDSSLAYQGAGRDMNMEQVL-QVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKG-REVN 58 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205 LD ++D+ HEK + + + P+R VD+ + + + IL Sbjct: 59 RLD---KEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETIL 103 >gi|150402215|ref|YP_001329509.1| thymidylate kinase [Methanococcus maripaludis C7] gi|166221755|sp|A6VFY2|KTHY_METM7 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|150033245|gb|ABR65358.1| dTMP kinase [Methanococcus maripaludis C7] Length = 199 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 14/145 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G GKTT L+ L K T EP ++ R +L + E Sbjct: 4 FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREILSGSKCQK---E 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FAA R++HV + ++ ++ DR++ SS YQ SQ + D + I+ Sbjct: 56 TLALLFAADRVEHVSKIEED--LKKSHVVSDRYVYSSIVYQ----MSQGIPKDFIYTIND 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR 150 PD ++LD+ ++ LKR+++R Sbjct: 110 YAKTPDLVVLLDVDLNEALKRMESR 134 >gi|218246100|ref|YP_002371471.1| dTMP kinase [Cyanothece sp. PCC 8801] gi|218166578|gb|ACK65315.1| dTMP kinase [Cyanothece sp. PCC 8801] Length = 207 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA----EAARHVLLSCGVD 60 LFI EGI+ AGK+T LLK + + ++ EP P EA + +++ Sbjct: 4 LFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIKNK 63 Query: 61 EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E A +FAA R H+ N V + E ++ R+ SS AY ++Q F Sbjct: 64 HNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC---NTQEEF 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 D + ++ + PD +D+ +++ + R+ N S RE Sbjct: 121 -DFVAGLNQRFPNPDIVFYIDINLEVAISRLSNA-SFRE 157 >gi|226947280|ref|YP_002802371.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto] gi|226842994|gb|ACO85660.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto] Length = 231 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 10/149 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L +N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVTENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQ 113 D A + +A R + ++G I++ DR+ S+ +Q + ++ Sbjct: 61 RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLP 139 FL+ L + ++ +PDC I LD+P Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMP 149 >gi|269986147|gb|EEZ92460.1| thymidylate kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 202 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 20/155 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVL---LSCGV 59 G I EGI+GAGK T +LK L+ + V V P + E + L + V Sbjct: 3 GKLIVIEGIDGAGKATQAKILKEQLESQGKTVSVYSYPDYSSVYGERIKSFLYKKIDLKV 62 Query: 60 DEFGAEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 DE +F +D V+ N I + +G +L DRF S+ AYQ S+ Sbjct: 63 DE--------LFMLYLIDMVKDRNRIIEDIKKGNDVLIDRFFFSTIAYQ----SAGGFSY 110 Query: 118 DSLQEISVQEVMPDCTII--LDLPVDIGLKRVQNR 150 ++ +E MP T++ +++PVDI ++R + + Sbjct: 111 ETGKEFVKLLGMPPITVVFYINVPVDISMQRKEKQ 145 >gi|321452944|gb|EFX64236.1| hypothetical protein DAPPUDRAFT_231894 [Daphnia pulex] Length = 209 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 21/223 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG + +GKTT R+LQ N + H+ R P + + + L C E Sbjct: 5 GALIVLEGCDRSGKTTLCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECST-ELD 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + + + I+ L +G ++ DR+ S A+ + ++ L Q+ Sbjct: 64 DYAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSAAK---PNMDLRWCQQS 119 Query: 124 SVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ PV+ + + +Y S + E + V+ R +L + Sbjct: 120 DSGLLKPDLVIFLDIDPVE---AQTRGQYG---SERYENLEMQKVV-----RSNYLKL-- 166 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 Q + +VD++ S + V ++ +V E + ++P S+ K + Sbjct: 167 -QDESWKVVDASRSMEEVGRDVCRLVQEALDN-ITPDSALKQL 207 >gi|300932844|ref|ZP_07148100.1| thymidylate kinase [Corynebacterium resistens DSM 45100] Length = 220 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 16/169 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEG++GAGK T +S ++ L + ++ V R G P E + H L+ +G Sbjct: 1 MIIAFEGVDGAGKNTLVSAVEAELLAR--EIPVARV--GFPRYEQSVHAQLAQAA-LYGQ 55 Query: 65 EAE--------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 + A +FA R + E++ + +G ++L DRF+ S+ AY R S + Sbjct: 56 MGDLLDSIHGMATMFALDRAEVAEDLASFS-EDGYVVLLDRFVASNAAYSTARLGSDSVA 114 Query: 116 -FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 ++ L+ S+ +PD +++D+ + +RV +R S D +E Sbjct: 115 DWVYGLEFDSLGSPLPDLQVLVDVDATVAQQRVAHRADEDSSRAQDRYE 163 >gi|154285394|ref|XP_001543492.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1] gi|150407133|gb|EDN02674.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1] Length = 232 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 95/208 (45%), Gaps = 24/208 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGV 59 G I EG++ AGK+T + L++ LQ + ++V R P T E + +++ + + Sbjct: 13 GALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRT--TEIGKLINGYLMQNAQL 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D+ ++F+A R + + R + G ++ DR+ S Y ++ L L+ Sbjct: 71 DDHSIH---LLFSANRWEAAAEIQRD-ISNGITVIIDRYSYSGAVYSAAKNIP-GLSLEW 125 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178 + + PD + L++ + KR Y + ER + + R RQ+F Sbjct: 126 AWQPEIGLPQPDIWLFLNISPEEAAKR--GGYGM---------ERYENDAFQTRIRQLFQ 174 Query: 179 D-IARNQPDRCHIVDSAHSFQSVATNIL 205 + IAR P+ H+VD+ + VA +++ Sbjct: 175 ELIAREDPNNIHVVDAGRAESEVALDVI 202 >gi|320582782|gb|EFW96999.1| Thymidylate and uridylate kinase [Pichia angusta DL-1] Length = 210 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 1/105 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+ I+ EG++ GKTT S L L + D + + P T + L+ Sbjct: 1 MTRGVLIAIEGLDRTGKTTQTSRLLERLDKSGVDATLIKFPERTTPIGRIINTYLTDKAF 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 E ++ ++F+A R + E IR L +GK ++ DR++ S AY Sbjct: 61 ELSDQSAHLLFSANRWELAEK-IRNLLEDGKTVVLDRYVYSGVAY 104 >gi|225557103|gb|EEH05390.1| thymidylate kinase [Ajellomyces capsulatus G186AR] Length = 232 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 95/208 (45%), Gaps = 24/208 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGV 59 G I EG++ AGK+T + L++ LQ + ++V R P T E + +++ + + Sbjct: 13 GALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRT--TEIGKLINAYLMQNAQL 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D+ ++F+A R + + R + G ++ DR+ S Y ++ L L+ Sbjct: 71 DDHSIH---LLFSANRWEAAAEIQRD-ISNGITVIIDRYSYSGAVYSAAKNIP-GLSLEW 125 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178 + + PD + L++ + KR Y + ER + + R RQ+F Sbjct: 126 AWQPEIGLPQPDIWLFLNISPEEAAKR--GGYGM---------ERYENDAFQTRIRQLFQ 174 Query: 179 D-IARNQPDRCHIVDSAHSFQSVATNIL 205 + +AR P+ H+VD+ + VA +++ Sbjct: 175 ELVAREDPNNVHVVDAGRAESEVALDVI 202 >gi|268611868|ref|ZP_06145595.1| putative thymidylate kinase [Ruminococcus flavefaciens FD-1] Length = 224 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 23/211 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++G+GK T +LL L+ + P + + L + Sbjct: 3 GKLIVIEGLDGSGKATQTALLCEKLKTLGVEFDHFSFPDYNSESSLLVRMYLDGKFGDNA 62 Query: 64 AE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQ 113 AE A + FA R + G I++CDR+ S+ +Q GE D Sbjct: 63 AEVNPYAASCFFACDRYASFRTQWQDKYEGGHIIVCDRYTTSNAVHQCSKLPDGEWDDFV 122 Query: 114 HLFLD-SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + D ++I + E PD I L + +IG + ++ RY+ E ++KD IHEK Sbjct: 123 NWLFDFEYRKIGLPE--PDAVIYLRVDPEIGQELLKKRYNGDE-------KKKD--IHEK 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 L+ +R D C + H+ + V N Sbjct: 172 DED-HLNRSRLTADHCAKLYGWHTIECVNEN 201 >gi|195150817|ref|XP_002016347.1| GL10538 [Drosophila persimilis] gi|194110194|gb|EDW32237.1| GL10538 [Drosophila persimilis] Length = 211 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FEG + GKTT LL FL+ K P + + L+ ++ Sbjct: 7 GALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLT-NSNDLP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +++ N IR L+ G L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAY----TAAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L D L R +Y L++ +K ++F I Sbjct: 121 ERGLIKPDAVFYLKTASDNLLSR--GKYGEERYEKLEF--------QQKVAEVFNRICEQ 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H +D+ S + T I I +L Q+ Sbjct: 171 ESSYWHQIDANQSVAEIHTQISGIAEKLQQQ 201 >gi|46130830|ref|XP_389146.1| hypothetical protein FG08970.1 [Gibberella zeae PH-1] Length = 270 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 15/186 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G FI EG++ +GKTT + LL++ + V V R P TP + + L S Sbjct: 22 NRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDNYLKSN--V 79 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+A R + V+ I+ L G +LCDR+ S Y + + L L Sbjct: 80 EMDDHVIHLLFSANRWEAVKQ-IQSLLASGTTILCDRYYHSGIVYSAAKQNP-SLTLPWA 137 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD + LDL + + R + +ER + ++ R++F + Sbjct: 138 RAPERGLPRPDLVLFLDL--------TEEQAQARGGWGGEVYERSG--MQKRVRELFWGL 187 Query: 181 ARNQPD 186 + D Sbjct: 188 SMGGKD 193 >gi|228905402|ref|ZP_04069357.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] gi|228854222|gb|EEM98925.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] Length = 328 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 20/189 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64 I+ EGI+G+GKT +SLL++ L+ K+ +V + P LS G +E A Sbjct: 111 IAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLS-GNEEVNANN 169 Query: 65 ---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 ++ ++ +A R EN + LL +RF SS YQ R + F+ Sbjct: 170 VDPKSMSLWYALDRWKEFEN---SNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQW 226 Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFERKDVMIHEKR 173 + E+ ++ PD I+ DL + K V N R + E A + Y E D+M Sbjct: 227 IFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADV-YEESADIM--SNA 283 Query: 174 RQIFLDIAR 182 R I+ D+A+ Sbjct: 284 RGIYQDLAK 292 >gi|227486952|ref|ZP_03917268.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867] gi|227093026|gb|EEI28338.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867] Length = 205 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 16/210 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS-CGVDE 61 + ++ EGI+GAGK T L++ L K+ D P + AA+ AR L G Sbjct: 1 MILAVEGIDGAGKNT---LVRDLL--KHIDAETLSFPRYSTSDAAKLARKALYGRMGDMT 55 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFL 117 A A +FA R E + + A + IL+ DR++ S+ AY R D++Q ++ Sbjct: 56 ESPYAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYD 115 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 E+ + + P I+L+ P + +R ++R D +E +D + + + Sbjct: 116 LEYGELGLPK--PALQILLETPASVAQERAESRARAERDRAKDTYE-QDSSLQVRTSVAY 172 Query: 178 LDIARNQ-PDRCHIVDSAHSFQSVATNILN 206 +AR Q IV + Q ILN Sbjct: 173 RRLARGQWASPWLIVPHTTTPQEATEEILN 202 >gi|187918646|ref|YP_001884212.1| thymidylate kinase [Borrelia hermsii DAH] gi|119861494|gb|AAX17289.1| thymidylate kinase [Borrelia hermsii DAH] Length = 212 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 6/107 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L++ K H T+EP + R L + + Sbjct: 18 FYCIEGIDGSGKTSIIQKLQKLCNNK-LKYHFTKEPSQGIIGKFIRKQLTNLK-NPLRRV 75 Query: 66 AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108 + A ++AA R +H+ N I L +GK ++ DR+L SS YQGE Sbjct: 76 SLAHLYAADRYEHLYNTKNGILEILNKGKTKVITDRYLFSSIVYQGE 122 >gi|291542136|emb|CBL15246.1| thymidylate kinase [Ruminococcus bromii L2-63] Length = 224 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 45/186 (24%), Positives = 79/186 (42%), Gaps = 18/186 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL---LSCGVDEF 62 I EG++G+GK T +L + V P +PAA + L D+ Sbjct: 6 IVIEGLDGSGKATQTKILCEKISALGKKVTKLEFPNYESPAAAPVKMYLDGEFGDKPDDV 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSL 120 A A + +A R+ + G ++L DR++ S+ YQ + + F+D L Sbjct: 66 NAYAASAFYAVDRVASYLQFWKKECDNGGVILSDRYVTSNIIYQMSKLPKEEWNSFIDWL 125 Query: 121 QEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + +++ PD I LD+ ++ K ++ RY S +KD +HEK + Sbjct: 126 NDFEYEKLGIPKPDLVIYLDVEPEVSQKLMEKRYGGDNS-------KKD--LHEKNLRFL 176 Query: 178 LDIARN 183 LD ++ Sbjct: 177 LDCRKS 182 >gi|302531808|ref|ZP_07284150.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4] gi|302440703|gb|EFL12519.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4] Length = 571 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 30/213 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-----GGTPAAEAARHVLLSCGV 59 + I+FEG+ GAGK+T +L R L+ + H T P P A A +L + G Sbjct: 1 MLITFEGLPGAGKSTQSRMLARCLESNGH--HATVLPDLATLDTDPVAAALVDLLRTSG- 57 Query: 60 DEFGAEAEAI----VFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQ 113 D F +AI + AA R D V V+ PAL E I++ DR + + +Y Q Sbjct: 58 DPFLRSGDAITDTMITAAIRADLVATVLDPALAENPSAIVIEDRGIHTMASYAIAALLRQ 117 Query: 114 H-----LFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNR-------YSLRESACL 159 H + LD L I+ P T + L +P + +R R ++ + A L Sbjct: 118 HRAPAQVALDWLSSITAL-AGPRTTRALWLRMPPAVAARRAGERGGDHRPAFTGEQRAHL 176 Query: 160 DYFERKDVMIHEKRRQI-FLDIARNQPDRCHIV 191 + + ++ E+ Q+ LD A P H+ Sbjct: 177 AWVDHAYALLAERDPQLTVLDAADLDPVGIHLA 209 >gi|75761480|ref|ZP_00741445.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491041|gb|EAO54292.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 228 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 20/189 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64 I+ EGI+G+GKT +SLL++ L+ K+ +V + P LS G +E A Sbjct: 11 IAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLS-GNEEVNANN 69 Query: 65 ---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 ++ ++ +A R EN + LL +RF SS YQ R + F+ Sbjct: 70 VDPKSMSLWYALDRWKEFEN---SNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQW 126 Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFERKDVMIHEKR 173 + E+ ++ PD I+ DL + K V N R + E A + Y E D+M + Sbjct: 127 IFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADV-YEESADIMSN--A 183 Query: 174 RQIFLDIAR 182 R I+ D+A+ Sbjct: 184 RGIYQDLAK 192 >gi|257470873|ref|ZP_05634963.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185] gi|317065075|ref|ZP_07929560.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185] gi|313690751|gb|EFS27586.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185] Length = 223 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 20/162 (12%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG + +GK T L +R L K Y+V P +PA E + L + Sbjct: 2 GKLIVIEGTDSSGKETQTKKLFERLLAEK-YNVKKISFPNYDSPACEPVKMYLAG----K 56 Query: 62 FGAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A ++++A R + E I++ DR++ S+ +Q + + Sbjct: 57 FGEDAMKVNPYPVSMMYAIDRYASYKMDWEKFYKEEGIIVTDRYVTSNMVHQASKIATED 116 Query: 112 SQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 + ++LD L E+ ++ PD I L++P ++ LK ++ R Sbjct: 117 EKSVYLDWLDELEYDKMDIPRPDLIIFLNMPTEMALKLMEER 158 >gi|213422228|ref|ZP_03355294.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 79 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 4/75 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLL---SCGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L S G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARL 76 +AE ++F AAR+ Sbjct: 65 ITDKAEVLMFYAARV 79 >gi|312140676|ref|YP_004008012.1| dtmp kinase [Rhodococcus equi 103S] gi|311890015|emb|CBH49333.1| dTMP kinase [Rhodococcus equi 103S] Length = 220 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 10/185 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T + + L+ DV P G + A+ A L D Sbjct: 1 MLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDLS 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 A A++FA R + +R + +++ DR++ S+ AY R + F+ Sbjct: 61 ASVHAMAVMFALDRAGAADR-LRDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVGW 119 Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ + + PD + LD+PV + +R + R + S LD +E KD + + ++ Sbjct: 120 IENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYE-KDSGLQARTGEV 178 Query: 177 FLDIA 181 + ++A Sbjct: 179 YRELA 183 >gi|313246105|emb|CBY35059.1| unnamed protein product [Oikopleura dioica] Length = 212 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 26/231 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG++ +GK+T I + + K +VH+TR P T + L D Sbjct: 1 MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +A ++F+A R +H ++++ + G +L DR+ S A+ +++ L L+ Sbjct: 61 -LSDQAIHLLFSANRWEHAQSILN-YMNNGTSVLVDRYAFSGVAFT----AAKGLDLEWC 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + PD + LD+ + KR + RY E F+R + R+++ Sbjct: 115 KNPDRGLPKPDLVLQLDVDEETAKKRGGFGEERYEKVE------FQR-------QVRKLY 161 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224 + D I+D++ S + + V E ++ K + L KKD Sbjct: 162 SQLREEHSDIWKIIDASGSVDELTPALQTHVDETIKSCQNKDIEKLWIKKD 212 >gi|307202789|gb|EFN82074.1| Thymidylate kinase [Harpegnathos saltator] Length = 209 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 25/214 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG + AGK+T + LL L ++ + P + LS ++ Sbjct: 6 GALIVLEGCDRAGKSTQVKLLTNALNERSIPTKASAFPNRNTPIGGLLNGFLSKEIN-IP 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA ++F+A R + E+ I L+ G L+ DR+ S AY ++ L+ ++ Sbjct: 65 PEAAHLLFSANRWECKED-IEKMLLSGTTLVIDRYASSGTAYTA---ANTGRCLNWCKQP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PDC ++ LK +++ LR + + FE+ D+ + ++ + + Sbjct: 121 DLGLPKPDCVML--------LKVSKHQQELRNNWGEERFEQNDLQV-----RVSANYEKL 167 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + D VD+ N+L I E+++K +S Sbjct: 168 KDDTWMTVDADQ-------NVLTIHGEILKKALS 194 >gi|269797674|ref|YP_003311574.1| thymidylate kinase [Veillonella parvula DSM 2008] gi|269094303|gb|ACZ24294.1| thymidylate kinase [Veillonella parvula DSM 2008] Length = 228 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 85/220 (38%), Gaps = 22/220 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL L ++ + V P A + L+ EFG Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114 + + ++A R G I++ DR+ S+ +Q + DS + Sbjct: 59 KDVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDSKER 118 Query: 115 L-FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD---V 167 FLD L++ Q+ PD +LD+P+++ + R D E V Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEGNHTYLV 178 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 +H+ ++ + R Q R VD A S Q I I Sbjct: 179 AVHDAYEEL---VKRYQWHRIPCVDKAKSSQYTLRTIEEI 215 >gi|257059151|ref|YP_003137039.1| thymidylate kinase [Cyanothece sp. PCC 8802] gi|256589317|gb|ACV00204.1| thymidylate kinase [Cyanothece sp. PCC 8802] Length = 207 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 12/153 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA----EAARHVLLSCGVD 60 LFI EGI+ AGK+T LLK + + ++ EP P EA + +++ Sbjct: 4 LFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIKNK 63 Query: 61 EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E A +FAA R H+ N V + E ++ R+ SS AY ++Q F Sbjct: 64 HNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC---NTQEEF 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 D + ++ + PD +D+ +++ + R+ N Sbjct: 121 -DFVAGLNQRFPNPDIVFYIDINLEVAISRLSN 152 >gi|227826764|ref|YP_002828543.1| thymidylate kinase related protein [Sulfolobus islandicus M.14.25] gi|229583934|ref|YP_002842435.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.27] gi|238618863|ref|YP_002913688.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4] gi|227458559|gb|ACP37245.1| thymidylate kinase related protein [Sulfolobus islandicus M.14.25] gi|228018983|gb|ACP54390.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.27] gi|238379932|gb|ACR41020.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4] gi|323476500|gb|ADX81738.1| thymidylate kinase [Sulfolobus islandicus HVE10/4] Length = 205 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60 + I+FEGIEG+GKT+H+ K++L+++ Y V + G + R+++ Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIV------ 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 F + + D +EN + P++ G I L D + Sbjct: 55 -FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 91 >gi|227829398|ref|YP_002831177.1| thymidylate kinase related protein [Sulfolobus islandicus L.S.2.15] gi|229578186|ref|YP_002836584.1| thymidylate kinase related protein [Sulfolobus islandicus Y.G.57.14] gi|284996769|ref|YP_003418536.1| thymidylate kinase related protein [Sulfolobus islandicus L.D.8.5] gi|227455845|gb|ACP34532.1| thymidylate kinase related protein [Sulfolobus islandicus L.S.2.15] gi|228008900|gb|ACP44662.1| thymidylate kinase related protein [Sulfolobus islandicus Y.G.57.14] gi|284444664|gb|ADB86166.1| thymidylate kinase related protein [Sulfolobus islandicus L.D.8.5] Length = 205 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60 + I+FEGIEG+GKT+H+ K++L+++ Y V + G + R+++ Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIV------ 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 F + + D +EN + P++ G I L D + Sbjct: 55 -FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 91 >gi|240277647|gb|EER41155.1| thymidylate kinase [Ajellomyces capsulatus H143] gi|325093734|gb|EGC47044.1| thymidylate kinase [Ajellomyces capsulatus H88] Length = 232 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/208 (23%), Positives = 96/208 (46%), Gaps = 24/208 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGV 59 G I EG++ AGK+T + L++ LQ + ++V R P T E + +++ + + Sbjct: 13 GALIVLEGLDRAGKSTQCASLQKTLQEEGHEVKYRRFPDRT--TEIGKLINAYLMQNAQL 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D+ ++F+A R + + R + G ++ DR+ S Y ++ L L+ Sbjct: 71 DDHSIH---LLFSANRWEAAAEIQRD-ISNGITVIIDRYSYSGAVYSAAKNIP-GLSLEW 125 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178 + + PD + L++ + KR Y + ER + + R RQ+F Sbjct: 126 AWQPEIGLPQPDIWLFLNISPEEAAKR--GGYGM---------ERYENDAFQTRIRQLFQ 174 Query: 179 D-IARNQPDRCHIVDSAHSFQSVATNIL 205 + +AR P+ H+VD++ + VA +++ Sbjct: 175 ELVAREDPNNVHVVDASRAESEVALDVI 202 >gi|223967381|emb|CAR93421.1| CG5757-PA [Drosophila melanogaster] gi|223967389|emb|CAR93425.1| CG5757-PA [Drosophila melanogaster] gi|223967393|emb|CAR93427.1| CG5757-PA [Drosophila melanogaster] Length = 211 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P N + R + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRSP--------PNDLTYRGQYGKERYEK--VEFQGRVAEVFDRICSK 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|288919199|ref|ZP_06413537.1| thymidylate kinase [Frankia sp. EUN1f] gi|288349446|gb|EFC83685.1| thymidylate kinase [Frankia sp. EUN1f] Length = 223 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 17/215 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ---RKNYDVHVTREPGGTPAAEAARHVLLS----C 57 + ++ EG++GAGK T S L L R R G P A R +L Sbjct: 1 MIVAIEGVDGAGKHTLTSRLVEALTAAGRTAATFSFPRYTAG-PLGTAVRAMLDGDERLA 59 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115 GV A A A++FA R + + + A E +LL DR+L S+ AY R + Sbjct: 60 GV-AGSARATALLFALDRANALPELAARA-AEHDVLLVDRYLASNAAYGAARLPADERPD 117 Query: 116 FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FL + E+ + + PD ++LD+PV+ + R + + LD FER D + E+ Sbjct: 118 FLAWIAELELTALRLPRPDLQVLLDVPVETARAAARQRAAGDATRALDTFER-DEGLQER 176 Query: 173 RRQIFLDIARNQPDRCHIV-DSAHSFQSVATNILN 206 I+ +A + IV D A ++V +L+ Sbjct: 177 CAGIYRHLAADGWVAPWIVADRATGAEAVLDALLS 211 >gi|72392763|ref|XP_847182.1| thymidylate kinase [Trypanosoma brucei TREU927] gi|62359227|gb|AAX79670.1| thymidylate kinase, putative [Trypanosoma brucei] gi|70803212|gb|AAZ13116.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 345 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 14/193 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGT-PAAEAARHVLLSCGVDEFGA 64 I F G +GAGK T +++ L ++ H + + P + R VL G Sbjct: 131 IVFGGGDGAGKATQTEYMRKRLDKEG-KAHASLDFPSDKHRYGKLIRKVLSGERGALHGL 189 Query: 65 EAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSL 120 + + +++F+ R D + +R L GK +L DR+ S++ +Q + +S + F+ L Sbjct: 190 DPKLFSLLFSLNRFDTLPE-LRYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHL 248 Query: 121 QEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ ++ + PD + LDLP L +Q R RES LD E + E RQ + Sbjct: 249 EQLELEWLKLPPPDVALYLDLPPAAALVAMQ-RDEKRES--LDIHETAGLSYKENVRQTY 305 Query: 178 LDIARNQPDRCHI 190 + +NQ + I Sbjct: 306 VWCCQNQRNWVQI 318 >gi|289676128|ref|ZP_06497018.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5] Length = 225 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 10/145 (6%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCG-V 59 G I EGI+G+GK T +LK FL ++ G A E A ++ G + Sbjct: 2 GKIIVVEGIDGSGKNTQTDKMLKAFLSSGVEASKISFPQYGKTFFAKEVASYLNGEFGSI 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-----H 114 ++ + A+++A R + E ++ + + +L+CDR++ S+ A+Q + S + Sbjct: 62 EQISPKLSAMLYAGDRFECKEEIVNKSTRDS-VLICDRYVYSNVAHQIAKVSDEDRNELR 120 Query: 115 LFLDSLQEISVQEVMPDCTIILDLP 139 ++++L+ + PD TI LD+P Sbjct: 121 EWIEALEFDVYKLPRPDLTIFLDVP 145 >gi|20093541|ref|NP_613388.1| thymidylate kinase [Methanopyrus kandleri AV19] gi|73920824|sp|Q8TZ38|KTHY_METKA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|19886382|gb|AAM01318.1| Thymidylate kinase [Methanopyrus kandleri AV19] Length = 194 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 26/164 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL++ EGI+G GK++ ++L FL+ +V REP EA ++ Sbjct: 2 GLYLGVEGIDGVGKSSVVNLAAEFLEIHGLEVTTVREPSTDIGREA---------LEWDD 52 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A+ F LD + + R ++L DR S+ AYQ + L+ + + Sbjct: 53 PYLQALAFT---LDRMLTLKRVDFEAADVVLSDRTFLSTLAYQSALGADMRWLLELQRPV 109 Query: 124 SVQEVMPDCTIILD---LPVDIG-----LKRVQNRYSLRESACL 159 PD I+D L D L+RV+NRY RE+A L Sbjct: 110 P----KPDVVYIIDREPLAEDATFDKEFLERVRNRY--REAARL 147 >gi|323473846|gb|ADX84452.1| thymidylate kinase related protein [Sulfolobus islandicus REY15A] Length = 205 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 11/98 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60 + I+FEGIEG+GKT+H+ K++L+++ Y + + G + R+++ Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKQGYGIITFGLQKSKLLGERITQVKRNIV------ 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 F + + D +EN + P++ G I L D + Sbjct: 55 -FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGY 91 >gi|116805978|emb|CAL26368.1| CG5757 [Drosophila simulans] Length = 211 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P + + NR E + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRAPSN----DLTNRGQYGE----ERYEK--VEFQSRVAEVFDRICSK 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 171 EASYFHKFDATQSVEDLHAQIGSITEELLPK 201 >gi|40215537|gb|AAL48064.2| RE69454p [Drosophila melanogaster] Length = 225 Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 21 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 79 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 80 DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAY----SAAKGLDFDWCYAP 134 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P N + R + +E+ V + ++F I Sbjct: 135 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFNRICSK 184 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 185 EGSYFHQFDARQSVEDLHAQIASITEELLPK 215 >gi|28573735|ref|NP_611290.3| CG5757 [Drosophila melanogaster] gi|28380736|gb|AAF57756.2| CG5757 [Drosophila melanogaster] gi|220949114|gb|ACL87100.1| CG5757-PA [synthetic construct] gi|220958186|gb|ACL91636.1| CG5757-PA [synthetic construct] gi|223967371|emb|CAR93416.1| CG5757-PA [Drosophila melanogaster] gi|223967373|emb|CAR93417.1| CG5757-PA [Drosophila melanogaster] gi|223967377|emb|CAR93419.1| CG5757-PA [Drosophila melanogaster] gi|223967379|emb|CAR93420.1| CG5757-PA [Drosophila melanogaster] gi|223967385|emb|CAR93423.1| CG5757-PA [Drosophila melanogaster] gi|223967387|emb|CAR93424.1| CG5757-PA [Drosophila melanogaster] gi|223967391|emb|CAR93426.1| CG5757-PA [Drosophila melanogaster] Length = 211 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAY----SAAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P N + R + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFNRICSK 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|39960728|ref|XP_364612.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15] gi|145010950|gb|EDJ95606.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15] Length = 240 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 35/230 (15%) Query: 4 GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GKTT + LL KRFL +V V R P T L VD Sbjct: 13 GALIVLEGLDRSGKTTQVQLLEKRFLD-LGRNVKVMRFPDRTTPIGQMIDGYLKSQVD-M 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + + I L G +LCDR+ S Y + + L L + Sbjct: 71 DDHVIHLLFSANRWEAAKQ-ITDLLSAGTTVLCDRYYYSGMVYSAAKQNPA-LPLSWARA 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V PD + LDL + + R + +ER + + + R++F ++ Sbjct: 129 PEVGLPRPDLVLFLDL--------TEEQAKARGGWGDELYERAE--MQRRVRELFWGLSM 178 Query: 183 NQPDR----------------CHIVDSAHSFQSVATNILNIVWELVQKRV 216 + + H+VD++ S ++V I W++V+ RV Sbjct: 179 GRIEAGGGSQREERARQEEEDLHVVDASPSVEAVCEEI----WKVVEPRV 224 >gi|256374448|ref|YP_003098108.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827] gi|255918751|gb|ACU34262.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827] Length = 710 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 10/137 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL I+ EG + L L+ ++V + EP E H LL+ D G Sbjct: 480 GLLITVEGDASLDTSVQARELAEVLRSAGHEVLLASEPD---LDERRVHELLNTA-DLAG 535 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSL 120 A A+V AA R D VE +RPAL G I++ DRF DS A+ G D+S+ L+ L Sbjct: 536 VRAHALVAAAVRADVVERRVRPALEAGLIVVVDRFADSPIAHFSASGSVDTSE---LERL 592 Query: 121 QEISVQEVMPDCTIILD 137 + + + PD T++LD Sbjct: 593 SDWATGRLRPDLTVLLD 609 >gi|195027421|ref|XP_001986581.1| GH20447 [Drosophila grimshawi] gi|193902581|gb|EDW01448.1| GH20447 [Drosophila grimshawi] Length = 211 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 17/221 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG + +GKTT L L K D+ P T + L+ + Sbjct: 7 GAFIVFEGCDRSGKTTQSRHLSSVLTSKGVDIKQINFPDRTTTIGGMINAYLT-NTQDLK 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R + V++ I+ L+ G ++CDR+ S AY +++ + D Sbjct: 66 DEVIHLLFSANRWECVDS-IKKDLLAGTTVICDRYSYSGAAYS----AAKGVDFDWCCAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L +D + +R S E + +E+ D K + F + Sbjct: 121 DRGLLEPDAVFYLKANLD----ELTSRGSYGE----ERYEKLD--FQRKVGEQFDRLYAQ 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV-SPLSSKK 223 + H++D++ S Q + I + ++Q+ PLS+ K Sbjct: 171 RSSYWHLLDASKSLQELQDQIAAVADGVLQQAAEQPLSTIK 211 >gi|171204|gb|AAA34486.1| CDC8 gene [Saccharomyces cerevisiae] Length = 216 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDTF 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + V+ I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 59 QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V + PD T+ L Q+ + E + + V EK +Q F+ + Sbjct: 117 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 167 Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217 R + IVD + Q V ++W++V+ +S Sbjct: 168 LDKEIRKGDESITIVDVTNKGIQEVEA----LIWQIVEPVLS 205 >gi|116805958|emb|CAL26358.1| CG5757 [Drosophila melanogaster] Length = 211 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P N + R + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRAP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFDRICSK 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|58265708|ref|XP_570010.1| thymidylate kinase [Cryptococcus neoformans var. neoformans JEC21] gi|57226242|gb|AAW42703.1| thymidylate kinase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 217 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 92/218 (42%), Gaps = 27/218 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG++ GK+T + L + L+R+ + + + P T L E Sbjct: 7 GAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPERTTQIGKMIDAYLQSKT-EID 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + IR L G ++ DR+ S A+ +++ L D Sbjct: 66 DHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFS----AAKGLPFDFCLHP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +PD T+ L LP + KR + RY + V I + RQ F + Sbjct: 121 DAGLPLPDVTLYLTLPPETAAKRSAYGEERY-------------ESVSIQQAVRQQFKLV 167 Query: 181 A-----RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A R+ D+ +++ +F+ V I + + ++V+ Sbjct: 168 ANEIKKRHGADKWIEIEADGTFEDVEERIWSQISDVVE 205 >gi|125808374|ref|XP_001360729.1| GA19108 [Drosophila pseudoobscura pseudoobscura] gi|54635901|gb|EAL25304.1| GA19108 [Drosophila pseudoobscura pseudoobscura] Length = 211 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FEG + GKTT LL FL+ K P + + L+ ++ Sbjct: 7 GALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLT-NSNDLP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +++ N IR L+ G L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAY----TAAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L D L R +Y L++ +K ++F I Sbjct: 121 ERGLIKPDAVFYLKTASDNLLSR--GKYGEERYEKLEF--------QQKVAEVFNRICEQ 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H +D+ + T I I +L Q+ Sbjct: 171 ESSYWHQIDANQPVAEIHTQISGIAEKLQQQ 201 >gi|195584457|ref|XP_002082023.1| GD25418 [Drosophila simulans] gi|194194032|gb|EDX07608.1| GD25418 [Drosophila simulans] Length = 211 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P + + NR E + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRAPSN----DLTNRGQYGE----ERYEK--VEFQGRVAEVFDRICSK 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 171 EASYFHKFDATQSVEDLHAQIGSITEELLPK 201 >gi|68067163|ref|XP_675552.1| thymidylate kinase [Plasmodium berghei strain ANKA] gi|56494802|emb|CAH95718.1| thymidylate kinase, putative [Plasmodium berghei] Length = 218 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDE 61 G FI FEG++ +GK+T LL L+ N V P T A ++ + Sbjct: 15 GNFIVFEGVDRSGKSTQSKLLVEHLKNNNIQVQYLCFPNRETTIGKIIANYLKME---ST 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F E ++F+A R + ++ I+ L+ G ++CDR YAY G SS L L Sbjct: 72 FSNETIHLLFSANRWEMMDQ-IKNLLINGIWVICDR-----YAYSGVAYSSGALKLPKEW 125 Query: 122 EISVQE--VMPDCTIILDLP 139 ++ + + PD L++P Sbjct: 126 CMNPDKGLIKPDAVCYLNVP 145 >gi|291166624|gb|EFE28670.1| dTMP kinase [Filifactor alocis ATCC 35896] Length = 226 Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust. Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 18/161 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG +G+GK T +LL ++L + + P +P++ + L EF Sbjct: 3 GKLIVIEGTDGSGKETQSNLLYQYLSDRGIPCRIVHFPNYNSPSSSLVKMYL----AGEF 58 Query: 63 GAEAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS 112 G EA+ +I +A R + +G +++ DR++ S+ +Q + Sbjct: 59 GTEADSVSPYIASIFYAGDRYASWKTDWMSFYEQGGVVIVDRYVMSNLIHQASKLKTTEE 118 Query: 113 QHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 ++ F D L ++ PD TI L + +D+ ++ R Sbjct: 119 KNQFRDWLYDLEYHIFSLPKPDMTIFLHVDIDVTFALMKER 159 >gi|330835059|ref|YP_004409787.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina Ar-4] gi|329567198|gb|AEB95303.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina Ar-4] Length = 211 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 72/149 (48%), Gaps = 16/149 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCGV 59 G I+ EGI+G+GK++ LLK +L+ K D ++T EA + LL+ Sbjct: 3 GHIIAMEGIDGSGKSSQAKLLKDWLENK-VDTYLTEWNSSDWIHEVIKEAKKKNLLT--- 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +++ A D E +I P G ++ DR+ +++A RDS + + ++ Sbjct: 59 ----PLTFSLIHATDFADRYERLILPMYRIGFTVVSDRYFYTAFA----RDSVRGVNINW 110 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQ 148 ++++ + PD T + + ++ L R++ Sbjct: 111 VRQLYSYAMKPDVTFFIRVTPEVALARLR 139 >gi|134109297|ref|XP_776763.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259443|gb|EAL22116.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var. neoformans B-3501A] Length = 217 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 27/218 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG++ GK+T + L + L+R+ + + + P T L E Sbjct: 7 GAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPDRTTQIGKMIDAYLQSKT-EID 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + IR L G ++ DR+ S A+ +++ L D Sbjct: 66 DHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFS----AAKGLPFDFCLHP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +PD T+ L LP + KR + RY + V I + RQ F + Sbjct: 121 DAGLPLPDVTLYLTLPPETAAKRSAYGEERY-------------ESVSIQQAVRQQFKLV 167 Query: 181 A-----RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A R+ D+ +++ +F+ V I + + +V+ Sbjct: 168 ANEIKNRHGSDKWIEIEADGTFEDVEERIWSQISNVVE 205 >gi|57167762|ref|ZP_00366902.1| thymidylate kinase [Campylobacter coli RM2228] gi|57020884|gb|EAL57548.1| thymidylate kinase [Campylobacter coli RM2228] Length = 185 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 11/148 (7%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75 GK+T ISLLK + + T EPGGT R +LL + + E ++F A R Sbjct: 5 GKSTQISLLKECFKEAVF----TAEPGGTKLGNHLRELLLYKPY-QLDKKTELLLFLADR 59 Query: 76 LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTII 135 H E +++ + K+++ DR S AY + ++ + L L +++ P I Sbjct: 60 AQHCEEILKAN--QDKLIISDRSFISGMAYAKDFENEE---LFRLNAFALENFFPQKVIF 114 Query: 136 LDLPVDIGLKRV-QNRYSLRESACLDYF 162 L ++ +R+ Q E +DYF Sbjct: 115 LKGDENLIKERLSQKEQDAIEKRGIDYF 142 >gi|116805954|emb|CAL26356.1| CG5757 [Drosophila melanogaster] gi|116805960|emb|CAL26359.1| CG5757 [Drosophila melanogaster] gi|116805962|emb|CAL26360.1| CG5757 [Drosophila melanogaster] gi|116805964|emb|CAL26361.1| CG5757 [Drosophila melanogaster] gi|116805966|emb|CAL26362.1| CG5757 [Drosophila melanogaster] gi|116805968|emb|CAL26363.1| CG5757 [Drosophila melanogaster] gi|116805972|emb|CAL26365.1| CG5757 [Drosophila melanogaster] gi|116805974|emb|CAL26366.1| CG5757 [Drosophila melanogaster] gi|116805976|emb|CAL26367.1| CG5757 [Drosophila melanogaster] Length = 211 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYS----AAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P N + R + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRSP--------PNDLTHRGQYGKERYEK--VEFQGRVAEVFDRICSK 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 171 EGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|183220659|ref|YP_001838655.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910761|ref|YP_001962316.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775437|gb|ABZ93738.1| Thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779081|gb|ABZ97379.1| Thymidylate kinase (dTMP kinase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 203 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 8/153 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F FEGI+G+GKTT + L K+ REP + + R L G + + Sbjct: 7 FFVFEGIDGSGKTTVSKKVSEILSTKSISNLWHREPTDSIHGQKIREFL--QGKIKLTPD 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 + +F R V I P L L+ DR+ S+ AYQG E ++ L+++ + Sbjct: 65 EQLKLFLLDREFSVNETILPTLKSDTCLVQDRYYFSTAAYQGRDEEHAADILYMNEDKGF 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 P+ LDL + L+R R +E+ Sbjct: 125 P----EPNRVYFLDLSPEEALERRNTRGGNKEA 153 >gi|225020669|ref|ZP_03709861.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii ATCC 33806] gi|305680065|ref|ZP_07402875.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266] gi|224946615|gb|EEG27824.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii ATCC 33806] gi|305660685|gb|EFM50182.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266] Length = 208 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 7/166 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I+ EGI+GAGKTT ++ L+ L + + R A R + G Sbjct: 1 MIENMIIAIEGIDGAGKTTLLATLREQLHAEV--IAFPRYETSIHAQLVRRALYQQMGDL 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A A +FA R + E ++ P + +++ DR++ S+ AY R + + +D + Sbjct: 59 TDSVYAMATLFALDRHEARE-LLHPFVASNALVVLDRYVASNAAYSWARTGDETI-IDWV 116 Query: 121 QEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 E+ + PD + L+ D+ +R NR L D +E Sbjct: 117 AELEFNTLGVPRPDLQVFLNTTPDVAGQRAINREKLDRDRARDSYE 162 >gi|269860112|ref|XP_002649779.1| thymidylate kinase [Enterocytozoon bieneusi H348] gi|220066838|gb|EED44309.1| thymidylate kinase [Enterocytozoon bieneusi H348] Length = 205 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 23/188 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-------AEAARHVL 54 N LFI EGI+ +GKTT +L+ + + ++ G E ++ Sbjct: 5 NKNLFIVLEGIDRSGKTTLCNLISKKINAVKFNFPDRTTNTGKKIDNFLKQYCENVENIF 64 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + ++E ++F RL+ + +++ +E ++CDR+ S Y + ++ Sbjct: 65 DNKEINE----KLHLLFRDNRLEKIPFILKT--LENHDIICDRYSMSGIVYSISKGLNEK 118 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKR------VQNRYSLRESACLDYFERKDVM 168 DS +++ + PD T LD+ +I KR + + ++ +Y + KD M Sbjct: 119 WVKDSEKDLPI----PDITFFLDVNPEISFKRQDFGNEIHDTIEFQKKVYENYLKNKDYM 174 Query: 169 IHEKRRQI 176 I K I Sbjct: 175 IFIKNDTI 182 >gi|167948232|ref|ZP_02535306.1| thymidylate kinase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 78 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 6/81 (7%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 ++LDLPV++GL R R + D FE + ++ RQ +L IA +QP+R ++D+ Sbjct: 1 MLLDLPVEVGLARAGQR------SAPDRFESEQQHFFQRVRQGYLQIAADQPERVRLIDA 54 Query: 194 AHSFQSVATNILNIVWELVQK 214 + V I + +Q+ Sbjct: 55 SLPLAQVQQQISRELERFIQR 75 >gi|70984984|ref|XP_747998.1| thymidylate kinase [Aspergillus fumigatus Af293] gi|66845626|gb|EAL85960.1| thymidylate kinase [Aspergillus fumigatus Af293] gi|159126077|gb|EDP51193.1| thymidylate kinase [Aspergillus fumigatus A1163] Length = 221 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 48/215 (22%), Positives = 93/215 (43%), Gaps = 16/215 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G I FEG++ AGK++ L+ LQ + V R P TP + L G Sbjct: 6 NRGALIVFEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + + I + G ++ DR+ S Y + + +L L+ Sbjct: 64 QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNPNLSLEWA 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD + L + + K R ++ +E + + + R++F + Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAK--------RGGFGVERYENE--TMQNRVRELFQTL 171 Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q D H +D+ SF +V+ +I+ IV + + + Sbjct: 172 FDLQQGDYIHTIDAGRSFDAVSQDIMKIVTDYIGR 206 >gi|218906650|ref|YP_002454484.1| thymidylate kinase, putative [Bacillus cereus AH820] gi|218535113|gb|ACK87511.1| thymidylate kinase, putative [Bacillus cereus AH820] Length = 328 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 20/189 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64 I+ EGI+G+GKT +SLL+ L+ K+ V + P LS G +E A Sbjct: 111 IAVEGIDGSGKTVQMSLLEEQLKEKDKQVIIKSFPVYDSFFGKNIGQFLS-GNEEVNANN 169 Query: 65 ---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 ++ ++ +A R EN + LL +RF SS YQ R + F+ Sbjct: 170 VDPKSMSLWYALDRWKEFENF---NYINYDYLLLNRFTLSSAVYQSSRVEPELREEFIQW 226 Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQN---RYSLRESACLDYFERKDVMIHEKR 173 + E+ ++ PD I+ DL + K V N R + E A + Y E D+M Sbjct: 227 IFELEHSQLGLPSPDLYIVFDLNAETSKKNVSNKGFRDYVGEKADV-YEESADIM--SNA 283 Query: 174 RQIFLDIAR 182 R I+ D+A+ Sbjct: 284 RGIYQDLAK 292 >gi|323304253|gb|EGA58027.1| Cdc8p [Saccharomyces cerevisiae FostersB] Length = 215 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRXGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + V+ I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V + PD T+ L Q+ + E + + V EK +Q F+ + Sbjct: 116 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 166 Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217 R + IVD + Q V ++W++V+ +S Sbjct: 167 LDKEIRKGDESITIVDVTNKDIQEVEA----LIWQIVEPVLS 204 >gi|19551980|ref|NP_599982.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|62389641|ref|YP_225043.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|145294916|ref|YP_001137737.1| thymidylate kinase [Corynebacterium glutamicum R] gi|21323519|dbj|BAB98146.1| Thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|41324976|emb|CAF19457.1| THYMIDYLATE KINASE, PUTATIVE [Corynebacterium glutamicum ATCC 13032] gi|140844836|dbj|BAF53835.1| hypothetical protein [Corynebacterium glutamicum R] Length = 203 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 15/203 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + +S EGI+GAGK T +S L + + K + R A AA + G A Sbjct: 1 MIVSIEGIDGAGKNTLVSALTQVIDAKV--LAFPRYETSIHAQLAAEALHGRMGDLTDSA 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122 A A +FA R ++++ P ++L DR++ S+ AY R D ++ L+ Sbjct: 59 YAMATLFALDRHFAIDDLNAPG-----VVLLDRYVASNAAYTAARLLDDDAPRWVADLEF 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + P ++LD P ++ R + R +L + D +E D + ++ + + +A Sbjct: 114 GRLGLPRPTLQVLLDTPAEVAQDRARRREALDSARARDRYE-SDSALQQRTAEHYRRLAA 172 Query: 183 NQPDRCHIV-----DSAHSFQSV 200 + + IV D H Q + Sbjct: 173 DNWESPWIVVAPDEDPGHVAQRI 195 >gi|6322517|ref|NP_012591.1| Cdc8p [Saccharomyces cerevisiae S288c] gi|1170719|sp|P00572|KTHY_YEAST RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|3318768|pdb|2TMK|A Chain A, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'- Deoxythymidine Monophosphate (Azt-Mp) gi|3318769|pdb|2TMK|B Chain B, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'- Deoxythymidine Monophosphate (Azt-Mp) gi|3318847|pdb|1TMK|A Chain A, Yeast Thymidylate Kinase Complexed With Thymidine Monophosphate (Dtmp) gi|3318848|pdb|1TMK|B Chain B, Yeast Thymidylate Kinase Complexed With Thymidine Monophosphate (Dtmp) gi|4558230|pdb|3TMK|A Chain A, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558231|pdb|3TMK|B Chain B, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558232|pdb|3TMK|C Chain C, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558233|pdb|3TMK|D Chain D, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558234|pdb|3TMK|E Chain E, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558235|pdb|3TMK|F Chain F, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558236|pdb|3TMK|G Chain G, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558237|pdb|3TMK|H Chain H, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|172971|gb|AAB05644.1| thymidylate kinase [Saccharomyces cerevisiae] gi|1015725|emb|CAA89585.1| CDC8 [Saccharomyces cerevisiae] gi|1019679|gb|AAB39283.1| ORF YJR057w [Saccharomyces cerevisiae] gi|151945125|gb|EDN63376.1| thymidylate kinase [Saccharomyces cerevisiae YJM789] gi|285812946|tpg|DAA08844.1| TPA: Cdc8p [Saccharomyces cerevisiae S288c] Length = 216 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + V+ I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 59 QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V + PD T+ L Q+ + E + + V EK +Q F+ + Sbjct: 117 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 167 Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217 R + IVD + Q V ++W++V+ +S Sbjct: 168 LDKEIRKGDESITIVDVTNKGIQEVEA----LIWQIVEPVLS 205 >gi|255071733|ref|XP_002499541.1| predicted protein [Micromonas sp. RCC299] gi|226514803|gb|ACO60799.1| predicted protein [Micromonas sp. RCC299] Length = 216 Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG++ GKTT + L L+ + + R P T + L +D Sbjct: 10 GAFILFEGVDRCGKTTQSTKLVESLKAAGVNAELWRYPDRTTEMGKMINAYLQSSLD-MD 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + + AL +G L+ DR+ S A+ ++ L L+ + Sbjct: 69 DGAIHLLFSANRWEK-RAAMEKALGDGVTLVVDRYSYSGVAFTAAKEVP-GLDLEWCKAP 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + PD + LD+PVD R Sbjct: 127 ERGLLRPDAVLYLDMPVDAAKTR 149 >gi|331220445|ref|XP_003322898.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301888|gb|EFP78479.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 228 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 2/108 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG++ +GK+T L+ L++ V R P T A + L C E Sbjct: 8 GSFIVFEGLDRSGKSTQCRRLEEKLKQAGRTVESIRFPDRTTAIGQMINSYL-CQTSELD 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 A ++FAA R + + I L G ++CDR+ S A+ + S Sbjct: 67 DHAIHLLFAANRWEKSAD-IHTTLRSGTTIICDRYAFSGTAFTAAKFS 113 >gi|156380955|ref|XP_001632032.1| predicted protein [Nematostella vectensis] gi|156219082|gb|EDO39969.1| predicted protein [Nematostella vectensis] Length = 214 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 50/213 (23%), Positives = 88/213 (41%), Gaps = 24/213 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GK+T LL +L+ ++ R P + A + L G E Sbjct: 7 GALICFEGCDRSGKSTQSRLLVDYLRSLGTNIEHMRFPDRSTAIGQCINSYLQ-GTSELD 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + V IR L G ++ DR+ S A+ + + L+ + Sbjct: 66 DHAIHLLFSANRWESVSK-IRSLLNTGTTIVVDRYAFSGVAFTSAK---KGFDLEWCKAP 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 PD I LD+ VD +R + RY + F+R + + +++ Sbjct: 122 DRGLPAPDIVIFLDISVDNAAERSEYGGERYETSD------FQRS---VANRYKEL---- 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 Q D ++D+ S + + I I E ++ Sbjct: 169 ---QADSWKVLDAGKSIEELHKEIQKIACETIK 198 >gi|303277967|ref|XP_003058277.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460934|gb|EEH58228.1| predicted protein [Micromonas pusilla CCMP1545] Length = 214 Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust. Identities = 39/143 (27%), Positives = 62/143 (43%), Gaps = 3/143 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG++ GKTT + L L+ + + R P T + + L E Sbjct: 8 GAFILFEGVDRCGKTTQSTKLVEALKSSGVNAELWRYPDRTTSMGQMINSYLQSKT-EMD 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++FAA R + + L EG L+ DR+ S A+ + L L+ + Sbjct: 67 DGAIHLLFAANRWEK-RAAMEAKLAEGVTLVVDRYSYSGVAFTAAK-GIPGLDLEWCKSP 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 V + PD + L++PV+ R Sbjct: 125 EVGLLRPDAVLYLNMPVEAAAAR 147 >gi|203288221|ref|YP_002223236.1| thymidylate kinase [Borrelia recurrentis A1] gi|201085441|gb|ACH95015.1| thymidylate kinase [Borrelia recurrentis A1] Length = 202 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 6/107 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L++ K H T+EP + R L + + Sbjct: 8 FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFK-NPLRKV 65 Query: 66 AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108 + A ++ A R +H+ N+ I L + + ++ DR+L SS AYQGE Sbjct: 66 SLAHLYVADRYEHLYNIQNGIITILNKNQTKVISDRYLFSSIAYQGE 112 >gi|172986|gb|AAA35158.1| thymidylate kinase [Saccharomyces cerevisiae] gi|190409534|gb|EDV12799.1| thymidylate kinase [Saccharomyces cerevisiae RM11-1a] gi|207343848|gb|EDZ71181.1| YJR057Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256273082|gb|EEU08037.1| Cdc8p [Saccharomyces cerevisiae JAY291] Length = 216 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + V+ I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 59 QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V + PD T+ L Q+ + E + + V EK +Q F+ + Sbjct: 117 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 167 Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217 R + IVD + Q V ++W++V+ +S Sbjct: 168 LDKEIRKGDESITIVDVTNKDIQEVEA----LIWQIVEPVLS 205 >gi|70607739|ref|YP_256609.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639] gi|68568387|gb|AAY81316.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639] Length = 210 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+ EGI +GKTTH+ L+ +L+ + Y V G +++ + S D Sbjct: 1 MEKGRIIAIEGIMSSGKTTHVQSLRDYLEDRGYVVTTI----GIQSSKLMADAIASVKRD 56 Query: 61 -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 F + + D EN+++P+L G I++ D ++ + A+ R Sbjct: 57 IVFQRRTLFLAYVTDLADQTENLVKPSLDSGFIVIADGYVLTLEAWALTR 106 >gi|210623262|ref|ZP_03293679.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275] gi|210153663|gb|EEA84669.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275] Length = 227 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 17/163 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 MN L I G + +GK T L + L Y+V P + + L Sbjct: 4 MNGKLIIIESGSDASGKATQSEELLKKLTADGYNVRKVEYPNYKSESSTLVKMYLRGDFG 63 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG------ERD 110 D+ A + F A R + G I++ DR+ S+ +Q ERD Sbjct: 64 KHADDVDAYIASTFFTADRYASFKTEWEEFYRSGGIVIADRYTTSNMVHQASKMEIEERD 123 Query: 111 SSQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNR 150 +LD L++ PD I L++PVD +K ++NR Sbjct: 124 K----YLDWLEDYEYNLFKIPRPDEVIFLNVPVDYSIKLMENR 162 >gi|224533463|ref|ZP_03674056.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a] gi|224513425|gb|EEF83783.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a] Length = 202 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 15/146 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + TREP E R L++ + Sbjct: 8 FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTREPSSGIIGEMIRKQLMNFE-NPLEES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148 ++ +P+ ++ +I +R+Q Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141 >gi|269962034|ref|ZP_06176388.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833118|gb|EEZ87223.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 80 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVL 54 FI EG+EGAGK+T I + L+ D+ TREPGGTP AE R ++ Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIQDIVNTREPGGTPLAEKMRALV 54 >gi|259147521|emb|CAY80772.1| Cdc8p [Saccharomyces cerevisiae EC1118] gi|323308467|gb|EGA61712.1| Cdc8p [Saccharomyces cerevisiae FostersO] gi|323336951|gb|EGA78208.1| Cdc8p [Saccharomyces cerevisiae Vin13] Length = 215 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + V+ I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V + PD T+ L Q+ + E + + V EK +Q F+ + Sbjct: 116 LQPDVGLLKPDLTLFL---------STQDVDNNAEKSGFGDERYETVKFQEKVKQTFMKL 166 Query: 181 ----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217 R + IVD + Q V ++W++V+ +S Sbjct: 167 LDKEIRKGDESITIVDVTNKDIQEVEA----LIWQIVEPVLS 204 >gi|203284688|ref|YP_002222428.1| thymidylate kinase [Borrelia duttonii Ly] gi|201084131|gb|ACH93722.1| thymidylate kinase [Borrelia duttonii Ly] Length = 202 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 6/107 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L++ K H T+EP + R L + + Sbjct: 8 FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFK-NPLRKV 65 Query: 66 AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGE 108 + A ++ A R +H+ N+ I L + + ++ DR+L SS AYQGE Sbjct: 66 SLAHLYVADRYEHLYNIQNGIIAILNKNQTKVISDRYLFSSIAYQGE 112 >gi|216263713|ref|ZP_03435708.1| thymidylate kinase [Borrelia afzelii ACA-1] gi|215980557|gb|EEC21378.1| thymidylate kinase [Borrelia afzelii ACA-1] Length = 202 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I+ LK + ++ + T+EP E + L++ + Sbjct: 8 FYCIEGIDGSGKTSIINKLKTICKNES-RYYFTKEPSSGIIGEMIKEQLMNFK-NPLKES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGE 108 A ++AA R DH+ ++ + ++ DR+L SS AYQG+ Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGK 111 >gi|303389072|ref|XP_003072769.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506] gi|303301911|gb|ADM11409.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506] Length = 191 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 12/143 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI FEG++ +GKTT + L L DV R P + L Sbjct: 1 MTQGKFIVFEGLDRSGKTTIVDSLYDSLSSMG-DVRKMRFPNRSGNIGKVIDAYLR---K 56 Query: 61 EFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E E I +F+ R + + L + ILLCDR+ S +Y ++ L LD Sbjct: 57 EINLENETIHLLFSGDRYEQKSTI--EELRKSSILLCDRYSLSGASYS----VAKGLDLD 110 Query: 119 SLQEISVQEVMPDCTIILDLPVD 141 + PD TI +D+P+D Sbjct: 111 WCVMVDSGLPKPDMTIFIDIPLD 133 >gi|237786074|ref|YP_002906779.1| thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385] gi|237758986|gb|ACR18236.1| Thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385] Length = 219 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 31/225 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL------- 55 + ++ EGI+GAGK T ++ +++ L + V + P + A+ AR L Sbjct: 1 MIVACEGIDGAGKNTLVTAIEKELVEREKPVALVSFPRYNDSVHAQLARSALYGGMGDVV 60 Query: 56 --SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-------Q 106 +CG+ A +FA R + +++ + +G +L DRF+ S+ AY Sbjct: 61 DSACGM--------ATLFALDRAEIADDIAELS-EDGYFVLIDRFVASNAAYTAARSGWD 111 Query: 107 GERDSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 G+ S + + + E+ + + +PD + L P + +R R S D FE Sbjct: 112 GQSPSQDNPTVSWIAELEFERLGIPVPDLHVFLSTPPRLASERAVAREGEDASRARDAFE 171 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 KD + ++ + +AR+Q +V AT ++ + Sbjct: 172 -KDSDLQQRTAAAYEALARDQWQSPWVVVEPGEVTRQATEVVEAI 215 >gi|261367061|ref|ZP_05979944.1| dTMP kinase [Subdoligranulum variabile DSM 15176] gi|282571180|gb|EFB76715.1| dTMP kinase [Subdoligranulum variabile DSM 15176] Length = 223 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 21/190 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---- 59 G I FEG++G+GK T +L + L+ D+ P + A + LS Sbjct: 2 GKLIIFEGLDGSGKGTQTALTAQKLKAHGVDLRQITFPNYESDSSALVKMYLSGQFGDKP 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FL 117 D+ A A + +A R + G ++L DR+ S+ +Q + H FL Sbjct: 62 DDVNAYAASSFYAVDRFASYKTDWGDFYRAGGLILSDRYTTSNAVHQCAKLPPMHWDGFL 121 Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L + +++ PD + L + ++ K + RY ES +KD I EK R Sbjct: 122 NWLFDFEYKKIGIPAPDAVVYLAVDPEVSQKLMDQRYHGDES-------KKD--IQEKDR 172 Query: 175 QIFLDIARNQ 184 + IAR++ Sbjct: 173 EY---IARSR 179 >gi|260796149|ref|XP_002593067.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae] gi|229278291|gb|EEN49078.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae] Length = 215 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDE 61 G I EG++ +GKTT L L++ + R P T A + + L C + + Sbjct: 6 GALIVLEGVDHSGKTTQCMKLVEALKKHGQKAELIRFPDRTTAIGSVINDYLGNKCELHD 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F A ++F+A R + V + + L EG L+ DR+ S A+ +++ L + LQ Sbjct: 66 F---AIHLLFSANRWEAVPRMEK-LLSEGTSLIVDRYAYSGVAFT----AAKGLDMRRLQ 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + L LP + KR + Y + +E+ D ++++ + Sbjct: 118 HSDIGLPRPDLVMYLTLPPEEAAKR--SEYG------GERYEQTDF-----QKKVAENFK 164 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q D I+++ + + + T+IL + E + K Sbjct: 165 VLQEDDWKILNANQTIEELHTHILQLAKEAITK 197 >gi|195487624|ref|XP_002091984.1| GE13938 [Drosophila yakuba] gi|194178085|gb|EDW91696.1| GE13938 [Drosophila yakuba] Length = 211 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 16/209 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 7 GALIIFEGCDRSGKTTQSRLLVELLKSKGIPALPMNFPERSSSIGQVINSYLTNSKD-LK 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY S++ L D Sbjct: 66 DEVIHLMFSANRWEHM-NQMKQKLLEGHTLVVDRYSFSGVAYS----SAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P + + NR E + +E+ V + ++F + N Sbjct: 121 ERGLIKPDAVFYLRAPPN----DLTNRGQYGE----ERYEK--VEFQSRVAKVFDRLCAN 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + H D++ + I +I EL+ Sbjct: 171 EASYWHQFDASQPVDELHARIASITEELL 199 >gi|164658566|ref|XP_001730408.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966] gi|159104304|gb|EDP43194.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966] Length = 520 Score = 44.7 bits (104), Expect = 0.010, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 12/154 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI EG++ +GK+T + R +Q + + P T + H L D Sbjct: 311 GVFIVVEGLDRSGKSTQV---DRLVQTLGPRARLVKFPERTTPIGSMIHSYLKNQTDACD 367 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + + ++++ +L +G+ ++CDR++ S AY ++ L L Sbjct: 368 QTVH-LLFSANRWELLSSIVQ-SLRDGQHVICDRYIFSGMAYT----HAKGLDLAWCTAP 421 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLR 154 V +PD T+ LDL KR + RY R Sbjct: 422 DVGLPVPDLTLFLDLDESTATKRAAYGEERYERR 455 >gi|124516694|gb|EAY58202.1| Thymidylate kinase [Leptospirillum rubarum] Length = 217 Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-----HVTREPGGTPAAEAARHVLLSCG 58 G I EGI+G+GK+T I LL+ +L+ K + V + ++E + +L G Sbjct: 8 GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKAKKKQLLTPYG 67 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ AA + I PAL GKI+L DR++ ++ A RD+++ + D Sbjct: 68 F--------SLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRD 115 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147 L + PD T + + R+ Sbjct: 116 WLVNNFRFAIRPDLTFFFRMDPALAYDRI 144 >gi|206603546|gb|EDZ40026.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG'] Length = 217 Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 17/149 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-----HVTREPGGTPAAEAARHVLLSCG 58 G I EGI+G+GK+T I LL+ +L+ K + V + ++E + +L G Sbjct: 8 GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKAKKKQLLTPYG 67 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ AA + I PAL GKI+L DR++ ++ A RD+++ + D Sbjct: 68 F--------SLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRD 115 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRV 147 L + PD T + + R+ Sbjct: 116 WLVNNFRFAIRPDLTFFFRMDPALAYDRI 144 >gi|320169555|gb|EFW46454.1| deoxythymidylate kinase [Capsaspora owczarzaki ATCC 30864] Length = 210 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 8/144 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I FEG + +GK+T +L L+ V R P TP + L E Sbjct: 9 GALIVFEGCDRSGKSTQCLMLVERLKALGKRVQHLRFPDRSTPTGQKINAYL--ANASEM 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +F+ R + V +++ AL G L+ DR+ S A+ S++ L L+ ++ Sbjct: 67 QDDKIHQLFSENRWEAVPSMLE-ALKNGTTLVVDRYAFSGVAFS----SAKGLDLEWCKK 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146 PD I LD+P++ +KR Sbjct: 122 PDAGLPAPDAVIYLDIPIEAAMKR 145 >gi|168050195|ref|XP_001777545.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671030|gb|EDQ57588.1| predicted protein [Physcomitrella patens subsp. patens] Length = 226 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 6/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ +GK++ + L +L+ + V R P T A LSC D Sbjct: 16 GALIVLEGLDRSGKSSQCAQLASYLESQGVAVEAWRFPDRTTAMGRMISSYLSCQTD-LD 74 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A ++F+A R + +++ L G L+ DR+ S A+ ++ L LD + Sbjct: 75 AAAIHLLFSANRWEKC-SLMESKLKAGTTLVIDRYSYSGVAF----SVAKGLDLDWCKGP 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 PD LD+ ++ R Sbjct: 130 EAGLPAPDLVFYLDISAEVAAAR 152 >gi|302896090|ref|XP_003046925.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256727853|gb|EEU41212.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 257 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 40/234 (17%) Query: 4 GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G FI EG++ +GKTT + LL +RF++ N V V R P TP + L S E Sbjct: 35 GAFIVLEGLDRSGKTTQVKLLEQRFVEEGN-KVKVMRFPDRSTPIGQMIDSYLKSD--VE 91 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V+ I+ L G ++CDR+ S Y + + L L + Sbjct: 92 MDDHVIHLLFSANRWEAVKQ-IQSLLAAGTTIVCDRYYHSGIVYSAAKQNP-SLTLPWAR 149 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD + LDL + + R + +ER + + + R++F ++ Sbjct: 150 APERGLPRPDLVLFLDL--------TEEQARSRGGWGGEVYERSE--MQRRVRELFWGLS 199 Query: 182 -------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + + + +VD+ S + VA VW V+ RV Sbjct: 200 MGGRDVTAQGLGLDEGEGWKQEEEDLVVVDAGGSVEEVAEE----VWRKVKGRV 249 >gi|153956386|ref|YP_001397151.1| hypothetical protein CKL_3795 [Clostridium kluyveri DSM 555] gi|219856699|ref|YP_002473821.1| hypothetical protein CKR_3356 [Clostridium kluyveri NBRC 12016] gi|146349244|gb|EDK35780.1| Tmk [Clostridium kluyveri DSM 555] gi|219570423|dbj|BAH08407.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 228 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 10/146 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T L L + Y+V P + A + L+ E Sbjct: 6 GKLIVIEGCDGSGKATQTRKLYNRLLDEKYNVKKVEYPNYNSESSALVKMYLNGDFGENP 65 Query: 64 AEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116 + A V + R + + G I+L DR+ S+ +Q + + + F Sbjct: 66 EDVSAYVASTFYGVDRFASYKTQWKKFYEGGGIVLSDRYTTSNMVHQASKIDNIEEKDKF 125 Query: 117 LDSLQEISVQEV---MPDCTIILDLP 139 L L + +PDC I LD+P Sbjct: 126 LKWLWDFEFNIFKLPVPDCVIFLDMP 151 >gi|67902452|ref|XP_681482.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4] gi|40739679|gb|EAA58869.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4] Length = 227 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 57/227 (25%), Positives = 89/227 (39%), Gaps = 16/227 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVD 60 G I EG++ AGK++ L LQ V R PG + A R L+ G Sbjct: 11 GALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPGDSSFARTLRRKLIDGYLRGQS 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F+A R + V I + G ++ DR+ S Y + ++ L L+ Sbjct: 71 HLDDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEWA 128 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD + L + + KR E+ E + E IF D+ Sbjct: 129 WQPEVGLPKPDLCLFLSISPEEAAKRGGFGGERYEN------EAMQTRVRELFNTIF-DL 181 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSSKKDI 225 R R I+D+ S V+ +ILN+V E + SPL I Sbjct: 182 QRATDIR--IIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 226 >gi|118468484|ref|YP_886239.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155] gi|118169771|gb|ABK70667.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155] Length = 210 Score = 44.3 bits (103), Expect = 0.013, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 13/172 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDE 61 + I+ EG++GAGK T + L+ + + V P PA AA + S G Sbjct: 1 MLIAIEGVDGAGKRTLTNGLRAAFETNHKSVASLAFPRYHQSVPADLAAEALRGSHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114 A A +FA R E + ++ A +++ DR++ S+ AY R D Sbjct: 61 ESVYAMATLFALDRAGAREQIEHLQAAY---DVVILDRYVASNAAYSAARLHQGVDGEVV 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 ++ L+ + +PD ++L++P ++ +R ++R + D +ER D Sbjct: 118 TWVHELEFGRLHLPVPDWQVLLNVPTELAAQRAEHRANTEADRAKDAYERDD 169 >gi|111115628|ref|YP_710246.1| thymidylate kinase [Borrelia afzelii PKo] gi|110890902|gb|ABH02070.1| thymidylate kinase [Borrelia afzelii PKo] Length = 202 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I+ LK + ++ + T+EP E + L++ + Sbjct: 8 FYCIEGIDGSGKTSIINKLKTICKNES-RYYFTKEPSSGIIGEMIKEQLMNFK-NPLKES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGE 108 A ++AA R DH+ ++ + ++ DR+L SS AYQG+ Sbjct: 66 IFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGK 111 >gi|323446155|gb|EGB02432.1| hypothetical protein AURANDRAFT_35261 [Aureococcus anophagefferens] gi|323448063|gb|EGB03967.1| hypothetical protein AURANDRAFT_33306 [Aureococcus anophagefferens] Length = 214 Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+F+ FEG++ +GK+T LL L+ K + R P R + +D Sbjct: 10 GVFVVFEGVDRSGKSTQCKLLVEGLRAKGRSAELRRFP--------ERSTGIGQLIDKYL 61 Query: 61 ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E A ++F+A R D + R AL G ++CDR+ S A+ + + Sbjct: 62 KRELELDDRAVHLLFSANRWDEAAKIER-ALASGVDVVCDRYAFSGVAFSAAKPNIDD-- 118 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 LD + PD + L++P Sbjct: 119 LDWCKAPDAGLPKPDVVVFLEIP 141 >gi|296168958|ref|ZP_06850627.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896427|gb|EFG76080.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 229 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 19/175 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEA--ARHVLLS 56 + I+ EG++GAGK T L++ + V + P AAEA RH L+ Sbjct: 1 MLIAIEGVDGAGKRTLSEGLRKAFEAAGKSVAIVGFPRYGKSVTADVAAEALHGRHGDLA 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DS 111 V A A++FA R VE+ I + +++ DR++ S+ AY R Sbjct: 61 ASV-----YAMAMLFALDRAGAVED-IEALRRDHDVVILDRYVASNAAYSAARLHEGAGG 114 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + ++ + ++ PD ++L +P D+ +R ++R D +ER D Sbjct: 115 AAAAWVLEFEYRRLRLPAPDWQVLLAVPADLAGQRARSRAESDPGRARDSYERDD 169 >gi|319411558|emb|CBQ73602.1| related to thymidylate kinase [Sporisorium reilianum] Length = 1229 Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 11/143 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++ AGK+T + L + L K + P T A + L+ D Sbjct: 431 GFFIVVEGLDRAGKSTQVERLAQHLHAK-----AIKFPERTTAIGQMINSYLAQTSD-LD 484 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A ++F+A R + V + I+ L G+ ++CDR+ S AY ++ L D + Sbjct: 485 DQAIHLLFSANRWECVAS-IKKTLDAGESIVCDRYAFSGIAYS----VAKGLSYDWCRNP 539 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 V +PD T+ LDL + R Sbjct: 540 DVGLPLPDLTMFLDLDAETAAAR 562 >gi|121718363|ref|XP_001276187.1| thymidylate kinase [Aspergillus clavatus NRRL 1] gi|119404385|gb|EAW14761.1| thymidylate kinase [Aspergillus clavatus NRRL 1] Length = 221 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 24/228 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ AGK++ L+ LQ Y V R P TP + L G Sbjct: 8 GALIVVEGLDRAGKSSQCERLRDSLQASGYSVKYIRFPDRTTPIGQLINGYLQ--GQSHL 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++F+A R + + I + G ++ DR+ S Y + +Q+L L+ + Sbjct: 66 DDHSIHLLFSANRWE-IARTIENDIANGVTVIVDRYSYSGAVYSAAK-GNQNLSLEWAWQ 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD + L + + K R ++ +E + + + R++F + + Sbjct: 124 PEIGLPQPDICLFLRISPEEAAK--------RGGFGIERYENEK--MQSRVRELFQTLFK 173 Query: 183 NQ-PDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLSS 221 Q D H+VD+ + +V+ +IL V ++ KR+ P+++ Sbjct: 174 LQLGDYIHMVDAGRTLDAVSQDILQTVTACLETIDATAPLKRLGPIAN 221 >gi|261335952|emb|CBH09285.1| putative thymidylate kinase [Heliconius melpomene] Length = 208 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 28/222 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 + G FI EG++ GKTT L L+ K P T E L S Sbjct: 3 LKRGAFIVIEGVDRTGKTTQAKKLVESLKNKQVSAEYMNFPDRKTDIGEVINSYLTSK-- 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA ++F+A R + V N I+ L+ G ++ DR+ S AY +++ L L Sbjct: 61 NDLSNEAIHLLFSANRWEKV-NYIKEKLLNGITVIVDRYCFSGVAYS----AAKGLDLSW 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD LP L+ VQ R + F + + E ++++ Sbjct: 116 CKSPDAGLPKPDKVFFFTLP----LEHVQQR---------NGFGSERYEVPEFQKKVTNT 162 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + + D ++D++ S + + ELV+K +S + S Sbjct: 163 YMKLKEDNWDMLDASRSLEVIHK-------ELVEKVLSVVDS 197 >gi|311739824|ref|ZP_07713658.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304897|gb|EFQ80966.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035] Length = 204 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 3/162 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T +S LK L R + R A A + + G A Sbjct: 1 MLISIEGIDGAGKNTLVSALKESLDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122 A A +FA R V++ ++ A ++L DR++ S+ AY R D + ++ +L+ Sbjct: 61 YAMATLFALDRY-GVKDQLQRAKESDTVVLLDRYVASNAAYSAARLEDDAVMEWVHNLEF 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 ++ D + LD V++ +R Q R S D +ER Sbjct: 120 GTLSLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER 161 >gi|242792112|ref|XP_002481887.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500] gi|218718475|gb|EED17895.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500] Length = 238 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 24/223 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G + EG++ AGK++ LL + L NY R P TP + L G + Sbjct: 13 GALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYLR--GQSQL 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++F+A R + ++ I + G ++ DR+ S Y + + +L L + Sbjct: 71 DDHSIHLLFSANRWELAQS-IHEYIANGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWAWQ 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIF---L 178 V PD + L + + KR Y + ER + +KR R++F L Sbjct: 129 PEVGLPRPDLCLFLSISPEEAAKR--GGYGV---------ERYETDSMQKRVRELFLSLL 177 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219 D+ N D ++D+ S VA +IL+ V E ++ + PL Sbjct: 178 DLPHN--DEICVIDAGQSVDEVAQDILDPVLECMKNVDSIGPL 218 >gi|213024834|ref|ZP_03339281.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 68 Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 38/67 (56%) Query: 84 RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG 143 +PAL +G ++ DR S+ AYQG L +L++ + + PD T+ LD+ ++G Sbjct: 1 KPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDVTPEVG 60 Query: 144 LKRVQNR 150 LKR + R Sbjct: 61 LKRARAR 67 >gi|212535132|ref|XP_002147722.1| thymidylate kinase [Penicillium marneffei ATCC 18224] gi|210070121|gb|EEA24211.1| thymidylate kinase [Penicillium marneffei ATCC 18224] Length = 238 Score = 43.9 bits (102), Expect = 0.015, Method: Compositional matrix adjust. Identities = 56/223 (25%), Positives = 94/223 (42%), Gaps = 24/223 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G + EG++ AGK++ LL + L NY R P TP + L G + Sbjct: 13 GALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYLR--GESQL 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++F+A R + V I+ + +G ++ DR+ S Y + + +L L + Sbjct: 71 DDHSIHLLFSANRWE-VAQSIQKDIADGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWAWQ 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIF---L 178 V PD + L + + KR Y + ER + +KR R +F L Sbjct: 129 PEVGLPRPDLCLFLSISPEEAAKR--GGYGV---------ERYETDSMQKRVRDLFLSLL 177 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219 D+ N D ++D+ S VA +IL V E ++ + PL Sbjct: 178 DLPHN--DEICVIDAGQSVDEVALDILEPVLECMKNVDSIGPL 218 >gi|71018245|ref|XP_759353.1| hypothetical protein UM03206.1 [Ustilago maydis 521] gi|46099078|gb|EAK84311.1| hypothetical protein UM03206.1 [Ustilago maydis 521] Length = 1208 Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 11/135 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++ AGK+T + L LQ K + P T A + L+ D Sbjct: 426 GFFIVVEGLDRAGKSTQVERLAAHLQAK-----AVKFPERTTAIGQMINSYLAQTSD-LD 479 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A ++F+A R + V ++ R L G+ ++CDR+ S AY ++ L D + Sbjct: 480 DQAIHLLFSANRWECVASLHR-TLEAGESIVCDRYAFSGIAYS----VAKGLSYDWCRNP 534 Query: 124 SVQEVMPDCTIILDL 138 V +PD T+ LDL Sbjct: 535 DVGLPLPDLTLFLDL 549 >gi|289422838|ref|ZP_06424671.1| dTMP kinase [Peptostreptococcus anaerobius 653-L] gi|289156748|gb|EFD05380.1| dTMP kinase [Peptostreptococcus anaerobius 653-L] Length = 226 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 16/163 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LF+ G +G+GK T L L Y V P + A + L+ Sbjct: 1 MAGKLFVIESGTDGSGKATQTKKLFDRLVEDGYRVRKVEFPNYDSDSSALIKMYLNG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSS 112 +FG +A+ + +AA R + + G I+L DR+ S+ +Q + DS+ Sbjct: 58 DFGDKADDVDAYIASTFYAADRYASYKLGWEDFYLNGGIILADRYTTSNMVHQASKMDST 117 Query: 113 --QHLFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNR 150 + FLD L E + ++ PD LD+P+ + K +++R Sbjct: 118 DDKEKFLDWLDDFEYGLYKIPRPDGVFFLDVPLKVSAKLMEDR 160 >gi|294950385|ref|XP_002786603.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983] gi|239900895|gb|EER18399.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983] Length = 233 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 5/147 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI EG++ +GK+T + + L QR +V P + A L Sbjct: 1 MARGAFIVLEGLDRSGKSTQLRRISEALRQRTGKEVVEMGFPRRSSAIGKMLDTYLRDSS 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA ++F+A R + + ++ L G+ ++CDR++ S AY + + + S Sbjct: 61 SKMRDEAVHLLFSANRWEAMSEML-SHLAAGRHIVCDRYIFSGVAYTAMKGTVDFEWCKS 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKR 146 + V PD + LDL + KR Sbjct: 120 ---VDVGLPKPDLVVFLDLSPEAAAKR 143 >gi|195941996|ref|ZP_03087378.1| thymidylate kinase (tmk) [Borrelia burgdorferi 80a] Length = 257 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ + Sbjct: 63 FYCIEGIDGSGKTSITNKLKALCNDES-KYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 120 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + + ++ DR+L SS AYQG+ E Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148 ++ +P+ ++ +I +R+Q Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQ 196 >gi|187777353|ref|ZP_02993826.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC 15579] gi|187774281|gb|EDU38083.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC 15579] Length = 235 Score = 43.9 bits (102), Expect = 0.016, Method: Compositional matrix adjust. Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 23/196 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG +G+GK T L L ++N V P + A + LS Sbjct: 5 MKRGRLIVIEGSDGSGKATQTKKLYDKLVKQNKKVKKVEFPNYKSESSALIKMYLSG--- 61 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-- 111 EFG +++ +A R + ++G I++ DR+ S+ +Q + Sbjct: 62 EFGKNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKEV 121 Query: 112 -SQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 ++ FL+ L + ++ +PDC I LD+P SL E+ + K+ Sbjct: 122 QAKDKFLNWLWDFEFEKFNLPVPDCVIFLDMPPKCSK-------SLMETRNNKFTGEKEK 174 Query: 168 MIHEKRRQIFLDIARN 183 IHE + L+ N Sbjct: 175 DIHENNYEYLLESYNN 190 >gi|167753463|ref|ZP_02425590.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216] gi|167658088|gb|EDS02218.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216] Length = 225 Score = 43.9 bits (102), Expect = 0.017, Method: Compositional matrix adjust. Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 11/153 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCG-VD 60 + I EG++GAGK+T + L++R ++ + H P AR + G VD Sbjct: 1 MLIVLEGLDGAGKSTQVELVRRMFAQEGVESHFLHFPRFDAPVYGELIARFLRGELGAVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114 + A++FA R D +R L G ++ DR++ S+ +Q G+R Sbjct: 61 KVDPYLVALLFAGDRADAAAQ-LRCWLDAGHAVVLDRYVYSNVGFQCAKLPAGDRQEELR 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRV 147 ++ L+ PD ++ LD+P K++ Sbjct: 120 RWILDLEFGYYGIPRPDVSLFLDVPFAFTEKKL 152 >gi|315918331|ref|ZP_07914571.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563] gi|313692206|gb|EFS29041.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563] Length = 226 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 35/234 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 N G I EG + +GK T LL + FL ++ +PA E + L Sbjct: 4 NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AG 59 Query: 61 EFGAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----G 107 EFG AE + ++A R + ++ E I + DR++ S+ +Q G Sbjct: 60 EFGLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEG 119 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + ++L++L+ + PDC I LD+P + ++ R + + E KD Sbjct: 120 KEKEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD- 173 Query: 168 MIHEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211 IHE+ R+ RN + C D S Q + IL V E+ Sbjct: 174 -IHERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 226 >gi|325680793|ref|ZP_08160331.1| dTMP kinase [Ruminococcus albus 8] gi|324107573|gb|EGC01851.1| dTMP kinase [Ruminococcus albus 8] Length = 217 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 24/179 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG++G+GK+T L +L+ K+ + P + + L+ E Sbjct: 4 LIVLEGLDGSGKSTQFEKLTEYLKGKDVKLKAISFPDYNDPSSTLVQMYLN---GEIAGS 60 Query: 66 AEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116 AEA+ +AA R + EG ++L R++ S+ YQ + + + Sbjct: 61 AEAVNAYAASSFYAADRYVSYKKYWEKDHAEGSLILAARYVTSNCIYQMTKLPEEQWESY 120 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L+ L++ +++ P I LD+P++I K + RY ES +KD IHEK Sbjct: 121 LEWLEDYEYEKLGLPKPTKVIFLDMPIEISQKLLSARYDGDES-------KKD--IHEK 170 >gi|323347864|gb|EGA82125.1| Cdc8p [Saccharomyces cerevisiae Lalvin QA23] Length = 168 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 5/136 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + V+ I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIIL 136 + V + PD T+ L Sbjct: 116 LQPDVGLLKPDLTLFL 131 >gi|257057066|ref|YP_003134898.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] gi|256586938|gb|ACU98071.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] Length = 220 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 9/173 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G + EG++GAGK T L L+ V P G A+ R L D Sbjct: 2 GRLVVVEGLDGAGKRTLTESLTAALREHGATVTTMTFPRYGRDVHADLVREALHGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115 A+++A R ++ IR AL E ++L DR++ S+ AYQ R D Sbjct: 62 AESVYGMAVLYALDRRGARDD-IRRALDEHDVVLLDRYVASNAAYQAARLRQGVDGPVVR 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++ L+ +PD ++L +PV++ +R R S D FE D + Sbjct: 121 WVRELEIDRFGLPVPDTQLLLRVPVEVAAERAVARERQDTSRTRDAFESDDAL 173 >gi|119498863|ref|XP_001266189.1| thymidylate kinase [Neosartorya fischeri NRRL 181] gi|119414353|gb|EAW24292.1| thymidylate kinase [Neosartorya fischeri NRRL 181] Length = 221 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 16/215 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G I EG++ AGK++ L+ LQ + V R P TP + L G Sbjct: 6 NRGALIVVEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + + I + G ++ DR+ S Y + +++L L+ Sbjct: 64 QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNRNLSLEWA 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD + L + + K R ++ +E + + + R++F + Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAK--------RGGFGVERYENE--TMQNRVRELFQTL 171 Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q D H +D+ SF +V+ +I+ IV + +++ Sbjct: 172 FDLQQGDYVHTIDAGRSFDAVSQDIMKIVTDSIER 206 >gi|195383450|ref|XP_002050439.1| GJ22153 [Drosophila virilis] gi|194145236|gb|EDW61632.1| GJ22153 [Drosophila virilis] Length = 211 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 4/103 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I FEG + GKTT L L K D T P T H L + E Sbjct: 7 GALIVFEGCDRCGKTTQNRQLFELLTGKGVDTMQTNFPDRSTAIGNVINHYLQNN--QEL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 E ++F+A R + + N I+ L+ G ++CDR+ S AY Sbjct: 65 SDEVIHLLFSANRWERM-NSIKKDLLAGTTVICDRYAYSGVAY 106 >gi|216264232|ref|ZP_03436224.1| thymidylate kinase [Borrelia burgdorferi 156a] gi|218249745|ref|YP_002375292.1| thymidylate kinase [Borrelia burgdorferi ZS7] gi|221217600|ref|ZP_03589069.1| thymidylate kinase [Borrelia burgdorferi 72a] gi|223889303|ref|ZP_03623890.1| thymidylate kinase [Borrelia burgdorferi 64b] gi|224532921|ref|ZP_03673532.1| dTMP kinase [Borrelia burgdorferi WI91-23] gi|225550262|ref|ZP_03771221.1| thymidylate kinase [Borrelia burgdorferi 118a] gi|226320838|ref|ZP_03796390.1| thymidylate kinase [Borrelia burgdorferi 29805] gi|226321258|ref|ZP_03796786.1| thymidylate kinase [Borrelia burgdorferi Bol26] gi|215980705|gb|EEC21512.1| thymidylate kinase [Borrelia burgdorferi 156a] gi|218164933|gb|ACK74994.1| thymidylate kinase [Borrelia burgdorferi ZS7] gi|221192546|gb|EEE18764.1| thymidylate kinase [Borrelia burgdorferi 72a] gi|223885224|gb|EEF56327.1| thymidylate kinase [Borrelia burgdorferi 64b] gi|224512159|gb|EEF82549.1| dTMP kinase [Borrelia burgdorferi WI91-23] gi|225369130|gb|EEG98584.1| thymidylate kinase [Borrelia burgdorferi 118a] gi|226233290|gb|EEH32041.1| thymidylate kinase [Borrelia burgdorferi Bol26] gi|226233704|gb|EEH32433.1| thymidylate kinase [Borrelia burgdorferi 29805] gi|312147845|gb|ADQ30504.1| thymidylate kinase [Borrelia burgdorferi JD1] Length = 202 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ + Sbjct: 8 FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148 ++ +P+ ++ +I +R+Q Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141 >gi|225549383|ref|ZP_03770355.1| thymidylate kinase [Borrelia burgdorferi 94a] gi|225370011|gb|EEG99452.1| thymidylate kinase [Borrelia burgdorferi 94a] gi|312149482|gb|ADQ29553.1| thymidylate kinase [Borrelia burgdorferi N40] Length = 202 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ + Sbjct: 8 FYCIEGIDGSGKTSITNKLKDLCNDES-RYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148 ++ +P+ ++ +I +R+Q Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141 >gi|225683576|gb|EEH21860.1| thymidylate kinase [Paracoccidioides brasiliensis Pb03] Length = 224 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 26/222 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T +LL+ LQR ++ + R+ P + + + Sbjct: 13 GALIVVEGLDRAGKSTQCALLQEALQRGGHENYGDRKTDQCPIWLETHNWMTIQSI---- 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +F+A R + + I+ + G ++ DR+ S Y +D L LD + Sbjct: 69 -----FLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKDVP-GLSLDWAWQP 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLD-IA 181 + PD + L++ + +R Y L ER + I + R RQ+F I Sbjct: 122 EIGLPQPDIWLFLNISPEEAARR--GGYGL---------ERYENDILQARVRQLFQTFIE 170 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221 R P ++++ S VA +IL+ + ++K + PL S Sbjct: 171 REDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 212 >gi|169334897|ref|ZP_02862090.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM 17244] gi|169257635|gb|EDS71601.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM 17244] Length = 227 Score = 43.5 bits (101), Expect = 0.021, Method: Compositional matrix adjust. Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 16/163 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G EG++G+GK T L+ + L+ + ++V P + A + L+ Sbjct: 1 MNKGKLFVIEGLDGSGKQTQSELITKRLKEEGHNVIRASYPNYKSQSSALVKMYLNG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERD 110 +FG A+ I +A R + + G I++ DR++ S+ +QG + Sbjct: 58 DFGKNADDIDPKVASTFYAVDRYATYKKEYEDFYLNGGIIIADRYVTSNMVHQGCKIKDV 117 Query: 111 SSQHLFLDSLQ--EISVQEV-MPDCTIILDLPVDIGLKRVQNR 150 + +LD L E ++ ++ PD LD+ ++ +++R Sbjct: 118 EKKEEYLDWLLDFEYNIFKIPKPDKVFFLDIDPEVSKALIKDR 160 >gi|321254063|ref|XP_003192951.1| thymidylate kinase [Cryptococcus gattii WM276] gi|317459420|gb|ADV21164.1| thymidylate kinase, putative [Cryptococcus gattii WM276] Length = 217 Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust. Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 6/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG++ GK+T + L + L+R+ + + P T L E Sbjct: 7 GAFIVFEGLDRCGKSTQVDHLVQRLERQGRRARLQKFPDRTTQIGKMIDAYLQSKT-EID 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + IR L G ++ DR+ S A+ +++ L D + Sbjct: 66 DHAIHLLFSANRWE-CSAAIRRDLASGITVIADRYAFSGIAFS----AAKGLCFDFCLQP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 +PD T+ L LP + +R Sbjct: 121 DAGLPLPDATLYLTLPPETAARR 143 >gi|317059743|ref|ZP_07924228.1| thymidylate kinase [Fusobacterium sp. 3_1_5R] gi|313685419|gb|EFS22254.1| thymidylate kinase [Fusobacterium sp. 3_1_5R] Length = 226 Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 93/234 (39%), Gaps = 35/234 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 N G I EG + +GK T LL + FL ++ +PA E + L Sbjct: 4 NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AG 59 Query: 61 EFGAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----G 107 EFG AE + ++A R + ++ E I + DR++ S+ +Q G Sbjct: 60 EFGLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEG 119 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + ++L++L+ + PDC I LD+P + ++ R + + E KD Sbjct: 120 KEKEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD- 173 Query: 168 MIHEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211 IHE+ R+ RN + C D S Q + IL V E+ Sbjct: 174 -IHERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 226 >gi|15595138|ref|NP_212927.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31] gi|2688733|gb|AAC67140.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31] Length = 257 Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ + Sbjct: 63 FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTKEPSSGIIGEMIRKQLMNFE-NPLEES 120 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + + ++ DR+L SS AYQG+ E Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148 ++ +P+ ++ +I +R+Q Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQ 196 >gi|25027324|ref|NP_737378.1| thymidylate kinase [Corynebacterium efficiens YS-314] gi|259506538|ref|ZP_05749440.1| thymidylate kinase [Corynebacterium efficiens YS-314] gi|23492605|dbj|BAC17578.1| putative thymidylate kinase [Corynebacterium efficiens YS-314] gi|259165958|gb|EEW50512.1| thymidylate kinase [Corynebacterium efficiens YS-314] Length = 203 Score = 43.5 bits (101), Expect = 0.023, Method: Compositional matrix adjust. Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 19/166 (11%) Query: 5 LFISFEGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + IS EGI+GAGK T + L R + YD + + AAEA H + Sbjct: 1 MIISIEGIDGAGKNTLVRALTERIDARVISFPRYDTSIHAQ----LAAEAL-HGRMGDLT 55 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFL 117 D A A A +FA R D ++ + P L LL DR++ S+ AY RD + ++ Sbjct: 56 DS--AHAMATLFALDRHDALDELTAPGL-----LLLDRYVASNAAYTAARLRDDAAATWV 108 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 L+ + P ++LD P D+ +R + R + + D +E Sbjct: 109 AELEFGRLGLPRPALQVLLDTPTDLAQERARRREASDGARTRDRYE 154 >gi|224531531|ref|ZP_03672163.1| thymidylate kinase [Borrelia valaisiana VS116] gi|224510996|gb|EEF81402.1| thymidylate kinase [Borrelia valaisiana VS116] Length = 202 Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust. Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 26/172 (15%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E + L++ + Sbjct: 8 FYCIEGIDGSGKTSITNKLKTLCNDES-KYYFTKEPSSGIIGEMIKEQLMNFK-NPLQES 65 Query: 66 AEAIVFAAARLDHV--ENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ + I L I ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRNDHLYKKGGILETLNTKSIKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQN-----------RYSLRESACLDYFE 163 ++ +P+ +++ ++ +R+Q RY E L Y + Sbjct: 116 LNKNFPLPEKVFFIEIEPNLAYERIQKHRTQSDLFELERYKTFEQIALKYLK 167 >gi|307243785|ref|ZP_07525917.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678] gi|306492839|gb|EFM64860.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678] Length = 233 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 16/163 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G +G+GK T LL L+ Y V P + A + L Sbjct: 1 MQGSVFVIESGTDGSGKATQTKLLYDRLKADGYKVIKVSYPNYDSDSSALVKMYLRG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS- 112 +FG +A+ + +AA R + EG I++ DR+ S+ +Q + Sbjct: 58 DFGKKADDVDAYIASTFYAADRYASYKTEWEDFYQEGGIVIADRYTTSNMVHQASKMDDI 117 Query: 113 --QHLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNR 150 + FLD L + + P LD+PVD+ +++R Sbjct: 118 EERASFLDWLDQYEYGLYKLPRPREVYFLDVPVDVSQDLIRDR 160 >gi|225551698|ref|ZP_03772642.1| thymidylate kinase [Borrelia sp. SV1] gi|225371725|gb|EEH01151.1| thymidylate kinase [Borrelia sp. SV1] Length = 202 Score = 43.1 bits (100), Expect = 0.025, Method: Compositional matrix adjust. Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ + Sbjct: 8 FYCIEGIDGSGKTSITNKLKALCNDES-RYYFTKEPSSGIIGELIREQLMNFE-NPLEES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ 148 ++ +P+ ++ +I +R+Q Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ 141 >gi|324512226|gb|ADY45070.1| Thymidylate kinase [Ascaris suum] Length = 234 Score = 43.1 bits (100), Expect = 0.027, Method: Compositional matrix adjust. Identities = 49/208 (23%), Positives = 79/208 (37%), Gaps = 20/208 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + AGK+T + +Q + + P + L V+ Sbjct: 5 GALIVFEGCDRAGKSTQAQRMVGRIQARGERAELISFPDRSTDLGKFIDQYLKGNVEMEP 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA +VFAA R V +R L G L+ DR+ S AY + L + ++ Sbjct: 65 REAH-LVFAANRQALV-GTMRNKLQHGTHLIVDRYTYSGIAYTLAKGLDVSLEWAKIHDV 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PDC + DL D KR R E C Y + + Sbjct: 123 GI--LKPDCVLYFDLLPDEARKRSGFGDERLEAYEYQCTVY-------------KFMQTL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 D ++D++ S V+T++ N++ Sbjct: 168 GSENADIWKVIDASKSIDEVSTDVWNLL 195 >gi|290462111|gb|ADD24103.1| Thymidylate kinase [Lepeophtheirus salmonis] Length = 214 Score = 43.1 bits (100), Expect = 0.028, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 9/146 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI EG + +GKTT L KR Q N++ R P + G Sbjct: 6 LKRGAFIVLEGCDRSGKTT---LAKRLSQDPNFEF--LRFPDRDSKLTGSLINSFLTGAK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + ++F+A R + V ++ L GK ++CDR+ S AY S + D Sbjct: 61 EMCGQLIHLLFSANRWEKVPQILS-TLDSGKHIICDRYAYSGIAYS---SSKPGMSFDWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146 PD + LD+ + LKR Sbjct: 117 ANSDNGLPTPDLILFLDVSPEEALKR 142 >gi|291544985|emb|CBL18094.1| thymidylate kinase [Ruminococcus sp. 18P13] Length = 234 Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust. Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 16/220 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G I +G++G GK+T LL + +++ V P + A + L+ + Sbjct: 5 GKLIVLDGLDGCGKSTQFQLLSQRMEQAGIPVLPISFPDYDHPSSALVKLYLNGEISPHA 64 Query: 61 -EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A A + +A R + +G +L R++ S+ +Q + Q + D Sbjct: 65 GDVNAYAASSFYAVDRYASYKRCWEQPYQQGTTILASRYVTSNAIHQMSKLPRQE-WDDY 123 Query: 120 LQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L+ +S E PD + LD+PV K + +RY E+ DV E+ Sbjct: 124 LEWLSAYEYDKLELPRPDLVLFLDMPVSAAQKLLCDRYGGDETK--KDIHESDVAYMERC 181 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVAT-NILNIVWELV 212 R L A+ Q ++ + Q + I + VW++V Sbjct: 182 RDAALYAAQQQ--GWQVIPCSRDAQPLTVEEIGDRVWKVV 219 >gi|323332865|gb|EGA74268.1| Cdc8p [Saccharomyces cerevisiae AWRI796] gi|323354251|gb|EGA86094.1| Cdc8p [Saccharomyces cerevisiae VL3] Length = 138 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 5/136 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQP---NCKLLKFPERSTRIGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + V+ I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWEIVDK-IKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIIL 136 + V + PD T+ Sbjct: 116 LQPDVGLLKPDLTLFF 131 >gi|302807401|ref|XP_002985395.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii] gi|300146858|gb|EFJ13525.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii] Length = 229 Score = 42.7 bits (99), Expect = 0.032, Method: Compositional matrix adjust. Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 21/198 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ +GK++ L FL+ V R P T A ++ L G E Sbjct: 7 GALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGA-ELD 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + + R LM G L+ DR+ S A+ + LD L+ Sbjct: 66 DRAVHLLFSANRWEKRLQMERK-LMAGTTLVVDRYSYSGVAFSAAKG------LD-LEWC 117 Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 EV +P ++L L + V+ Y LD+ ++++ L Sbjct: 118 KAPEVGLPAADLVLYLDISPEEAAVRGGYGDERYEQLDF-----------QKKVALQYKG 166 Query: 183 NQPDRCHIVDSAHSFQSV 200 Q R IVD+ SF V Sbjct: 167 LQGKRWKIVDARQSFDQV 184 >gi|125974597|ref|YP_001038507.1| thymidylate kinase [Clostridium thermocellum ATCC 27405] gi|256004041|ref|ZP_05429026.1| thymidylate kinase [Clostridium thermocellum DSM 2360] gi|281419122|ref|ZP_06250139.1| thymidylate kinase [Clostridium thermocellum JW20] gi|125714822|gb|ABN53314.1| thymidylate kinase [Clostridium thermocellum ATCC 27405] gi|255991964|gb|EEU02061.1| thymidylate kinase [Clostridium thermocellum DSM 2360] gi|281407271|gb|EFB37532.1| thymidylate kinase [Clostridium thermocellum JW20] gi|316941715|gb|ADU75749.1| thymidylate kinase [Clostridium thermocellum DSM 1313] Length = 227 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 29/199 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L I G + +GK T + L L ++ Y V P + A + L+ Sbjct: 1 MKGKLIIIESGADASGKATQTNKLYERLVQEGYKVKKITFPNYDSDSSALVKMYLNG--- 57 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---D 110 +FG + + +A R A +G I+L DR+ S+ +Q + Sbjct: 58 DFGKDPNDVSPYVASTFYAVDRFASYRTEWGQAYNDGWIILADRYTTSNMVHQAAKIKDM 117 Query: 111 SSQHLFLDSLQ--EISVQEV-MPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFER 164 + FLD L E + ++ +PDC I LD+P +K N+++ ++ Sbjct: 118 EEKDRFLDWLWNFEFEIYKLPVPDCVIFLDMPPSFSRELMKERANKFTGE--------QK 169 Query: 165 KDVMIHEKRRQIFLDIARN 183 KD IHE+ + ++ RN Sbjct: 170 KD--IHERNDEYLVESYRN 186 >gi|328853928|gb|EGG03063.1| hypothetical protein MELLADRAFT_44639 [Melampsora larici-populina 98AG31] Length = 222 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 56/234 (23%), Positives = 87/234 (37%), Gaps = 33/234 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G F+ EG++ GK+T +L L V + R P H L+ D Sbjct: 5 NRGAFVVIEGLDRCGKSTQCKILADRLTNAGRSVELMRFPDRETVIGKMIHSYLNQESD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE----RDSSQHLFL 117 A ++FAA R + + L G L+CDR+ S A+ R Q Sbjct: 64 LDDHAIHLLFAANRWE------KRHLQSGTTLICDRYAFSGVAFTSAKFQLRTPPQPESF 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRR 174 SL +PD I L +P++ + R Q RY E++D+ KR+ Sbjct: 118 TSLSSPDRGLPLPDLVIFLTMPMEATVTRGGFGQERY-----------EKEDLQAEVKRQ 166 Query: 175 QIFLDIARNQPDRCHI------VDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 F + R H ++++ S V I V L+ ++ P K Sbjct: 167 --FEQVVEPAFTRLHGQGRWVEINASGSIDEVTCRISKTVDRLLGSKLDPAVGK 218 >gi|240172610|ref|ZP_04751269.1| thymidylate kinase [Mycobacterium kansasii ATCC 12478] Length = 214 Score = 42.7 bits (99), Expect = 0.033, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 13/172 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T L+ Q V P G + A+ A L D Sbjct: 1 MLIAVEGVDGAGKRTLTVRLRAAFQAVGKSVVTLAFPRYGRSVTADIAAEALHGQHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGER--DSSQHLFL 117 A A A +FA LD A + +++ DR++ S+ AY R + + + Sbjct: 61 SSAYAMATLFA---LDRAGAAAEIAELRRNYDVVILDRYVASNAAYSAARLREDAGGPAV 117 Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 +Q+I Q + +PD ++L +P D+ +R ++R D +ER D Sbjct: 118 AWVQQIEYQRMGLPVPDWQVLLAVPADLAAQRARSRAEADPGRARDSYERDD 169 >gi|315925896|ref|ZP_07922101.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620717|gb|EFV00693.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263] Length = 231 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 18/152 (11%) Query: 2 NSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +G I EG++G+GK T L R + + V ++ RH L Sbjct: 5 QAGKLIVIEGVDGSGKQTQSQRLYGRLAAQGKRVLRVAYPRYDEDSSAMVRHYL----AG 60 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---D 110 +FG + +A+ FAA R I P L G +++ DR+ ++ +Q + Sbjct: 61 DFGEDPDAVSPYVAATFFAADRYASYRQEIGPFLAGGGLVIADRYTTANMLHQAGKIADA 120 Query: 111 SSQHLFLDSLQEISVQEV---MPDCTIILDLP 139 +++ FLD L++ + + PD I LD+P Sbjct: 121 AARQAFLDWLEDYEFRLLGLPRPDAVIYLDMP 152 >gi|187933942|ref|YP_001885545.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B] gi|187722095|gb|ACD23316.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B] Length = 208 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 56/209 (26%), Positives = 88/209 (42%), Gaps = 35/209 (16%) Query: 9 FEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 FEGI+ GKTT I LK R + Y+ + PG + +E Sbjct: 16 FEGIDNVGKTTIIKELKGRICKEMGYECEIVAFPGNEERTLGG--FVYDIHHNEKRYIDY 73 Query: 68 AIVFAAARLDHVE---NVIRPALME----GKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +I A+ +L HV ++I+ LME KI++ DRF S+YAY L Sbjct: 74 SINDASLQLLHVASHIDLIQRKLMEKYSSSKIIMMDRFWWSTYAYG---------LSGGL 124 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSL--RESACLDYFERKDVMIHEKRRQIF 177 + V ++ P I +++ N+ L R+ DY KD++I + R Sbjct: 125 KSNVVSAILA--------PELICWEKINVNKIFLIERKDREKDYEADKDILIMQNYR--- 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILN 206 D+AR P +C I+++ S + I N Sbjct: 174 -DLARKNP-KCQIINNDGSLEETTNMIFN 200 >gi|294793438|ref|ZP_06758575.1| dTMP kinase [Veillonella sp. 3_1_44] gi|294455008|gb|EFG23380.1| dTMP kinase [Veillonella sp. 3_1_44] Length = 228 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 22/220 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL L ++ + V P A + L+ EFG Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYNSGAAMPIKMYLAG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQ 113 + + ++A R G I++ DR+ S+ +Q + + Sbjct: 59 KDVHDVNPYVASSMYAIDRFASFRTDWEQFYNNGGIIIADRYTTSNMVHQMVKYDDLKER 118 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD---V 167 FLD L++ Q+ PD +LD+P+++ + R D E V Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEVLMAERTGKTGGNTGDIHEGNHAYLV 178 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 +H+ ++ + R Q R D A S Q I I Sbjct: 179 AVHDAYEEL---VKRYQWHRIPCADKAKSSQYTLRTIEEI 215 >gi|213409950|ref|XP_002175745.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275] gi|212003792|gb|EEB09452.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275] Length = 209 Score = 42.7 bits (99), Expect = 0.035, Method: Compositional matrix adjust. Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 18/208 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G F+ FEG++ +GK+T LLK+ L + + R P GT + L + ++ Sbjct: 3 GKFVVFEGLDRSGKSTQAELLKKALIDRGQRAILLRFPDRGTTIGKQIDAYLKNK--NKL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA ++F+A R + + + I AL +G + DR+ S A+ +++ + D ++ Sbjct: 61 PDEAIHLLFSANRWE-LASTIEAALADGVHCIVDRYSFSGVAFS----AAKGMDWDWCKQ 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD + + +I KR RY L F+R + RQ F+ Sbjct: 116 PERGLPSPDIVLFFQVDPNIASKRAGFGNERYE------LPVFQRTVAEKYALLRQEFVK 169 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207 R D ++D S + V IL I Sbjct: 170 -ERKNDDSWLMIDGNQSIEQVHLKILTI 196 >gi|219684919|ref|ZP_03539860.1| thymidylate kinase [Borrelia garinii PBr] gi|219671657|gb|EED28713.1| thymidylate kinase [Borrelia garinii PBr] Length = 202 Score = 42.7 bits (99), Expect = 0.036, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 24/210 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP + + L++ + Sbjct: 8 FYCIEGIDGSGKTSITNKLKTLCNDES-RYYFTKEPSNGIIGKMIKEQLMNFE-NPLKES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + K ++ DR+L SS AYQG E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ-----KNRTQSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSFQ----SVATNILNIV 208 + +++ +S + A I N++ Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLI 200 >gi|296327936|ref|ZP_06870471.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154892|gb|EFG95674.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 225 Score = 42.7 bits (99), Expect = 0.038, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNE 116 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D ERKD Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSERKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|294791584|ref|ZP_06756732.1| dTMP kinase [Veillonella sp. 6_1_27] gi|294456814|gb|EFG25176.1| dTMP kinase [Veillonella sp. 6_1_27] Length = 228 Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust. Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 22/220 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL L ++ + V P A + L+ EFG Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQ 113 + + ++A R G I++ DR+ S+ +Q + + Sbjct: 59 KDVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDPKER 118 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD---V 167 FLD L++ Q+ PD +LD+P+++ + R D E V Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEGNHAYLV 178 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 +H ++ + R Q R D A S Q I I Sbjct: 179 AVHGAYEEL---VKRYQWHRIPCADKAKSSQYTLRTIEEI 215 >gi|219685925|ref|ZP_03540727.1| dTMP kinase [Borrelia garinii Far04] gi|219672537|gb|EED29574.1| dTMP kinase [Borrelia garinii Far04] Length = 202 Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 24/210 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP + + L++ + Sbjct: 8 FYCIEGIDGSGKTSITNKLKTLCNDES-RYYFTKEPSNGIIGKMIKEQLMNFE-NPLKES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + K ++ DR+L SS AYQG E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQ-----KNRTQSDIFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSFQ----SVATNILNIV 208 + +++ +S + A I N++ Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLI 200 >gi|19704658|ref|NP_604220.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714964|gb|AAL95519.1| Thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 42.7 bits (99), Expect = 0.040, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNE 116 Query: 112 SQHLFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D ERKD Sbjct: 117 KKDEYLKWLVDLEYNKNEIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSERKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus kodakarensis KOD1] gi|73919452|sp|Q5JJC8|SRP54_PYRKO RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus kodakarensis KOD1] Length = 448 Score = 42.4 bits (98), Expect = 0.043, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 9/74 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64 GI+G+GKTT ++ L R+LQ++ Y V V T PG A R +L G++ FG Sbjct: 107 GIQGSGKTTSVAKLARYLQKRGYKVGVVCSDTWRPG---AYYQLRQLLDPFGIEVFGDPE 163 Query: 65 EAEAIVFAAARLDH 78 E +A+ A ++H Sbjct: 164 EKDAVKLAREGVEH 177 >gi|170582308|ref|XP_001896072.1| thymidylate kinase [Brugia malayi] gi|158596802|gb|EDP35082.1| thymidylate kinase, putative [Brugia malayi] Length = 213 Score = 42.4 bits (98), Expect = 0.045, Method: Compositional matrix adjust. Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 15/206 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG + AGK+ L ++ DV + P + L V+ Sbjct: 7 GAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLKKEVEMDP 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA +VFAA R + ++ L++G L+ DR+ S AY + + ++ ++ + Sbjct: 67 KEAH-LVFAANR-QALMPLMMKKLLKGTHLVVDRYAYSGIAYTLAK-GADNITMEWAKLA 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLDIAR 182 + E+ PDC I +L + KR S D ER D K ++ +A Sbjct: 124 DMGELRPDCVIYFNLSFEEAQKR---------SGFGD--ERFDFGNFQGKVSKVMEQLAD 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 D +VD++ + + ++ N+ N+V Sbjct: 173 EDRDLWKVVDASLTVEEISENVWNLV 198 >gi|257126449|ref|YP_003164563.1| thymidylate kinase [Leptotrichia buccalis C-1013-b] gi|257050388|gb|ACV39572.1| thymidylate kinase [Leptotrichia buccalis C-1013-b] Length = 225 Score = 42.4 bits (98), Expect = 0.049, Method: Compositional matrix adjust. Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL + L+ + V + + A+ V + EFG Sbjct: 2 GKLIIIEGTDGSGKQTQTELLYKKLKEIKGEEKVKKISFPNYESRASEPVKMYLA-GEFG 60 Query: 64 AEAEAI-VFAAA------RLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDS 111 AE++ +AA+ R + G I++ DR+ S+ +Q E++ Sbjct: 61 KTAESVNAYAASVLYSIDRFASFKTEWEEFYNNGGIVISDRYTISNMIHQVPKILDEKEK 120 Query: 112 SQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 ++L +L L+ + PD LD+P + K ++NR Sbjct: 121 EKYLEWLVDLEWGKIGIPKPDIVFFLDIPFEFSQKLMKNR 160 >gi|307109187|gb|EFN57425.1| hypothetical protein CHLNCDRAFT_20952 [Chlorella variabilis] Length = 230 Score = 42.4 bits (98), Expect = 0.050, Method: Compositional matrix adjust. Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 6/104 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLS-CGVDE 61 G FI FEG + AGK+T +L LQ + + R P TP + L S +D+ Sbjct: 8 GAFIVFEGADRAGKSTQCQMLVEHLQAQGVAAELWRFPDRTTPIGKMINSYLTSQSDIDD 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 A ++F+A R + E ++R L EG L+ DR+ S A+ Sbjct: 68 ---AAVHLLFSANRWEKREELLRK-LHEGTTLVVDRYAYSGVAF 107 >gi|75706618|gb|ABA25861.1| thymidylate kinase [Phytoplasma sp. CPh] Length = 209 Score = 42.4 bits (98), Expect = 0.051, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 38/177 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT+ I+ L+ P + + G G E Sbjct: 4 LIVFEGLDGSGKTSLINYLQ-------------------PQLKTPHQLYQGLGSSSLGKE 44 Query: 66 AEAIVFAAARLDHVENV---------IRPALM-EGKILLCDRFLDSSYAYQ---GERDSS 112 + ++D++ I+ L + ++++ DR+L S+YAYQ ++ Sbjct: 45 IRDLFLNFQQVDYLTRFYLSLANMAQIQAELFKKNQLIILDRWLPSTYAYQLFPFSKEKQ 104 Query: 113 QHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163 Q L + +++ + ++ PD I LD+ IG R + + + L E L YF+ Sbjct: 105 QLFPLKKIFKLNHETILNKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERKSLTYFQ 161 >gi|16975316|pdb|1E9F|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Adp Length = 217 Score = 42.4 bits (98), Expect = 0.052, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 19/204 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G I EG++GAGK+T L L + + R P + E + LLS + Sbjct: 9 GALIVLEGVDGAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 65 DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + R L + ER H Q+ D Sbjct: 121 KQPDVGLPKPDLVLFLQLQLADAAKRGRARGELERYENGAFQERALRCFH----QLMKDT 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 N +VD++ S ++V +I Sbjct: 177 TLN----WKMVDASKSIEAVHEDI 196 >gi|251771465|gb|EES52042.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum] Length = 220 Score = 42.0 bits (97), Expect = 0.056, Method: Compositional matrix adjust. Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 19/218 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVD 60 G I EGI+G+GK+T + LL +LQ K + V P +P A+ + Sbjct: 11 GRLIVVEGIDGSGKSTQLDLLSDYLQSKGFGVLKSAWNSSPDISPIIRKAKKKQV----- 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A +++ AA I PA+ G I+L DR++ ++ A R + L + Sbjct: 66 -LTPYAFSLLHAADFSFRYTYEILPAMEAGMIVLSDRYIYTAIARDCARGLPRPWLLSNF 124 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYF----ERKDVMIHEKRRQ 175 ++PD T + + + +R+ S++ A LD R+ ++ + R Sbjct: 125 NF----AIVPDLTFLFRVDPETSYQRITRTRSIKFYEAGLDMELSTDPRESYILFQSRVL 180 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 D R + H+VD+ S + T + ++ +++ Sbjct: 181 AEYDNLR-ETHGFHVVDATLSLEKTQTRMRRLLSPIIR 217 >gi|172040159|ref|YP_001799873.1| thymidylate kinase [Corynebacterium urealyticum DSM 7109] gi|171851463|emb|CAQ04439.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 231 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 23/179 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLSCG--V 59 + I+FEGI+GAGK T ++ L+ L + V R A A R + G + Sbjct: 1 MIIAFEGIDGAGKNTLVTALEAELLARELPVARVSFPRYEDSVHAQLAQRALTGQMGDLI 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---------- 109 D A +FA R + E + +G I+L DRF+ S+ AY R Sbjct: 61 DSI--HGMATLFALDRAEVAEQ-LEDLDADGYIVLMDRFVASNAAYSAARLAEEATGGAE 117 Query: 110 --DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + +QH ++ ++ + V ++ +PD +++D ++ +R ++R + D +E Sbjct: 118 PLEPAQHPVVEWVRSLEVDDLGSPVPDLQVLVDASAEVAGERAKSREQQDAARTRDAYE 176 >gi|84995356|ref|XP_952400.1| thymidylate kinase [Theileria annulata strain Ankara] gi|65302561|emb|CAI74668.1| thymidylate kinase, putative [Theileria annulata] Length = 214 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 3/103 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEF 62 G I FEGI+ +GK+T I+LL + L +N V P TP + R L + + Sbjct: 9 GKLIVFEGIDRSGKSTQINLLSQKLSEENIKNEVLSFPYKTTPTGKLLREYLRNRD-ESI 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 +A ++F+A R + + +I+ L G ++ DR+ S AY Sbjct: 68 PKQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAY 109 >gi|227505511|ref|ZP_03935560.1| thymidylate kinase [Corynebacterium striatum ATCC 6940] gi|227197875|gb|EEI77923.1| thymidylate kinase [Corynebacterium striatum ATCC 6940] Length = 204 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 21/175 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-------C 57 + IS EGI+GAGK T + +K+ L + +V+V G P E + H L+ Sbjct: 1 MLISIEGIDGAGKNTLVQRIKKEL---SVEVNVL----GFPRYEESVHAQLAQDALYGRM 53 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLF 116 G A A A +FA RL E ++ A E K +L+ DR++ S+ AY R + + Sbjct: 54 GDLTDSAFAMATLFALDRLGAKERLL--AAQESKDLLILDRYVASNAAYSAARLGTDEV- 110 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +D + ++ P I LD V++ R +R + D +E+ + Sbjct: 111 IDWVFDLEFGRFGLPKPQLQIFLDTDVELAAARATSRAEEDSTRVRDRYEKDSTL 165 >gi|307692944|ref|ZP_07635181.1| putative thymidylate kinase [Ruminococcaceae bacterium D16] Length = 222 Score = 42.0 bits (97), Expect = 0.058, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 15/160 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I FEG +G+GK+T L R + + + P + A + L+ EF Sbjct: 2 AGRLIVFEGTDGSGKSTQFQALCRRVTQSGREYQKLVFPQYNEPSSALIRMYLA---GEF 58 Query: 63 GAE-------AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH- 114 G A + +A R ++ V +G ++L DR+ S+ +Q + + Q Sbjct: 59 GTHPQDVNPYAASAFYAVDRYASLKKVWGEYYEQGGLVLTDRYTTSNAVHQAVKCAPQER 118 Query: 115 ----LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 +LD + + PD + LD+P + ++ ++ R Sbjct: 119 EAFLRWLDDFEHDKLGLPRPDLVLYLDMPTERAVELLRRR 158 >gi|260577914|ref|ZP_05845844.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734] gi|258603934|gb|EEW17181.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734] Length = 216 Score = 42.0 bits (97), Expect = 0.061, Method: Compositional matrix adjust. Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 13/189 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDE 61 + +SFEG++GAGK T ++ +++ L + V R PA A + + G Sbjct: 1 MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQ----HL 115 A +FA LD E A +G ++L DR+ S+ AY R Sbjct: 61 HSVHGMATLFA---LDRAEIGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGE 117 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ L++ + PD I++D+ ++ +R ++R + ++ D +ER D + E+ Sbjct: 118 WVTQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVC 176 Query: 176 IFLDIARNQ 184 + +A Q Sbjct: 177 AYRALAEQQ 185 >gi|291009673|ref|ZP_06567646.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] Length = 214 Score = 42.0 bits (97), Expect = 0.062, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 25/204 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN----------YDVHVTREPGGTPAAEAARHV 53 G I EG++GAGK T L L R+ YD V E AEA R Sbjct: 2 GRLIVIEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAE----LVAEALRGG 57 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DS 111 G G A+++A R + +R L ++L DR++ S+ AY R Sbjct: 58 HGDLGDSVHGM---AVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQD 113 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +Q F+ +E+ ++ PD ++L +P ++ R +R D FE D Sbjct: 114 AQGDFVAWTEELEIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFE-SDAS 172 Query: 169 IHEKRRQIFLDIA-RNQPDRCHIV 191 + E+ +++ +A RN +V Sbjct: 173 LQERCGEVYAQLAERNWWSPWRVV 196 >gi|224534161|ref|ZP_03674741.1| dTMP kinase [Borrelia spielmanii A14S] gi|224514586|gb|EEF84900.1| dTMP kinase [Borrelia spielmanii A14S] Length = 202 Score = 42.0 bits (97), Expect = 0.063, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I+ LK ++ + T+EP + + L++ + Sbjct: 8 FYCIEGIDGSGKTSIINKLKALCNDES-RYYFTKEPSSGIVGKMIKEQLMNFK-NPLKES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGE 108 A ++AA R DH+ ++ + ++ DR+L SS AYQG+ Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSTKVITDRYLFSSIAYQGK 111 >gi|282848946|ref|ZP_06258335.1| dTMP kinase [Veillonella parvula ATCC 17745] gi|282581221|gb|EFB86615.1| dTMP kinase [Veillonella parvula ATCC 17745] Length = 228 Score = 42.0 bits (97), Expect = 0.064, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 16/152 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL L ++ + V P A + L+ EFG Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLA---GEFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQ 113 + ++A R G I++ DR+ S+ +Q + + Sbjct: 59 KNVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDNPKER 118 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDI 142 FLD L++ Q+ PD +LD+P+++ Sbjct: 119 TAFLDWLEDFEFQKFGLPKPDAVCLLDMPLEV 150 >gi|237744136|ref|ZP_04574617.1| thymidylate kinase [Fusobacterium sp. 7_1] gi|229431365|gb|EEO41577.1| thymidylate kinase [Fusobacterium sp. 7_1] Length = 225 Score = 42.0 bits (97), Expect = 0.064, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNE 116 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|258650987|ref|YP_003200143.1| major facilitator superfamily protein [Nakamurella multipartita DSM 44233] gi|258554212|gb|ACV77154.1| major facilitator superfamily MFS_1 [Nakamurella multipartita DSM 44233] Length = 725 Score = 42.0 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 21/140 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT--REPGGTPAAEAARHVLLSCGV 59 ++G I+ EG + A ++ +++ LQ Y V REP T + S V Sbjct: 469 HAGALIAVEGTDAAATADYLKSIEQHLQETGYLTCVVSRREPSPT---------VRSAAV 519 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D A+A+ +A + + + PAL +G ++LCD F+D R + L D Sbjct: 520 DPL---ADALRTSATLAELMATQVGPALEDGAVVLCDGFMDEFIV----RYRTLGLVEDD 572 Query: 120 LQEISVQEV---MPDCTIIL 136 L ++V + PD T+++ Sbjct: 573 LSRVAVWAISGLKPDLTVVV 592 >gi|313113917|ref|ZP_07799475.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623756|gb|EFQ07153.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255] Length = 223 Score = 42.0 bits (97), Expect = 0.065, Method: Compositional matrix adjust. Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 19/197 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 M+ G I EG++G+GK T LL L+ + + V P + A + L+ Sbjct: 1 MSKGKLIVLEGLDGSGKATQAKLLAAHLKEQGFSVREITFPNYESDSSALVKMYLAGQFG 60 Query: 60 ---DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 D+ A A + +A R + G I++ DR+ S+ +Q + + Sbjct: 61 QHPDDVNAYAASSFYAVDRYASYKKDWGSFYENGGIIIADRYTTSNAVHQCSKLPPEQWE 120 Query: 116 -FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FL L + + PD I L + + K + RY ES RKDV HE Sbjct: 121 SFLGWLFDFEFHLLGLPAPDEVIYLQVDPAVSQKLMTQRYHGDES-------RKDV--HE 171 Query: 172 KRRQIFLDIARNQPDRC 188 K + +L +R + C Sbjct: 172 KDTE-YLARSRCAAEYC 187 >gi|302795849|ref|XP_002979687.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii] gi|300152447|gb|EFJ19089.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii] Length = 253 Score = 42.0 bits (97), Expect = 0.067, Method: Compositional matrix adjust. Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 21/198 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ +GK++ L FL+ V R P T A ++ L G E Sbjct: 7 GALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGA-ELD 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + + LM G L+ DR+ S A+ + LD L+ Sbjct: 66 DRAVHLLFSANRWEKRLQ-MEKKLMAGTTLVVDRYSYSGVAFSAAKG------LD-LEWC 117 Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 EV +P ++L L + V+ Y LD+ ++++ L Sbjct: 118 KAPEVGLPAADLVLYLDISPEEAAVRGGYGDERYEQLDF-----------QKKVALQYKG 166 Query: 183 NQPDRCHIVDSAHSFQSV 200 Q R IVD+ SF V Sbjct: 167 LQGKRWKIVDARQSFDQV 184 >gi|257467201|ref|ZP_05631512.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563] Length = 222 Score = 42.0 bits (97), Expect = 0.070, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 35/232 (15%) Query: 4 GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG + +GK T LL + FL ++ +PA E + L EF Sbjct: 2 GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AGEF 57 Query: 63 GAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GER 109 G AE + ++A R + ++ E I + DR++ S+ +Q G+ Sbjct: 58 GLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKE 117 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++L++L+ + PDC I LD+P + ++ R + + E KD I Sbjct: 118 KEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD--I 170 Query: 170 HEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211 HE+ R+ RN + C D S Q + IL V E+ Sbjct: 171 HERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 222 >gi|291522522|emb|CBK80815.1| thymidylate kinase [Coprococcus catus GD/7] Length = 223 Score = 41.6 bits (96), Expect = 0.072, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 8/153 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DEF 62 FI EG +G+GK T LL + K D P + A L+ D+ Sbjct: 3 FIVIEGNDGSGKATQSQLLLETMLEKGIDARKLSFPNYQSDSSALVKGYLAGRYGKRDDI 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSL 120 A A +AA R+ + +GK+++ DR+ S+ YQ + FL L Sbjct: 63 SPYAAASFYAADRIASYMEDWKRDYEKGKLIIADRYTTSNAIYQCARLPRMRRRRFLQWL 122 Query: 121 QEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 E + PD I LD+ DI ++ ++ R Sbjct: 123 YEYEYDLLGLPEPDMVIYLDVDPDISMQLIEQR 155 >gi|330916235|ref|XP_003297345.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1] gi|311330039|gb|EFQ94563.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1] Length = 155 Score = 41.6 bits (96), Expect = 0.073, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 3/146 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG++ AGK+T L LQ V R P T + LS G Sbjct: 1 MTRGKLIVFEGLDRAGKSTQCQKLVEDLQNDGMKVRHMRFPDRTTPIGQMINSYLS-GDS 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+A R + N I+ L G ++ DR+ S Y + + L+ Sbjct: 60 EQEDHVIHLLFSANRWE-AANSIQADLTAGTTIIIDRYYYSGCVYSAAK-QKHDMSLEWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146 + + PD I LD+ + KR Sbjct: 118 RNPELGLPRPDLCIFLDISAEDAAKR 143 >gi|257453209|ref|ZP_05618508.1| thymidylate kinase [Fusobacterium sp. 3_1_5R] Length = 222 Score = 41.6 bits (96), Expect = 0.074, Method: Compositional matrix adjust. Identities = 56/232 (24%), Positives = 92/232 (39%), Gaps = 35/232 (15%) Query: 4 GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG + +GK T LL + FL ++ +PA E + L EF Sbjct: 2 GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYL----AGEF 57 Query: 63 GAEAEAI-------VFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GER 109 G AE + ++A R + ++ E I + DR++ S+ +Q G+ Sbjct: 58 GLNAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKE 117 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++L++L+ + PDC I LD+P + ++ R + + E KD I Sbjct: 118 KEEYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKR-----ANKITGEEEKD--I 170 Query: 170 HEKRRQIFLDIARNQPD----------RCHIVDSAHSFQSVATNILNIVWEL 211 HE+ R+ RN + C D S Q + IL V E+ Sbjct: 171 HERNREYLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 222 >gi|68536724|ref|YP_251429.1| thymidylate kinase [Corynebacterium jeikeium K411] gi|68264323|emb|CAI37811.1| tmk [Corynebacterium jeikeium K411] Length = 216 Score = 41.6 bits (96), Expect = 0.074, Method: Compositional matrix adjust. Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 13/189 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDE 61 + +SFEG++GAGK T ++ +++ L + V R PA A + + G Sbjct: 1 MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGER---DSSQ-HL 115 A +FA LD E A +G ++L DR+ S+ AY R D ++ Sbjct: 61 HSVHGMAALFA---LDRAEIGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGE 117 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ L++ + PD I++D+ ++ +R ++R + ++ D +ER D + E+ Sbjct: 118 WVTQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVC 176 Query: 176 IFLDIARNQ 184 + +A Q Sbjct: 177 AYRALAEQQ 185 >gi|254302827|ref|ZP_04970185.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323019|gb|EDK88269.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 225 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + + I++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYTDDYIIITDRYVTSNMIHQASKIKNNE 116 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|256027750|ref|ZP_05441584.1| thymidylate kinase [Fusobacterium sp. D11] gi|289765707|ref|ZP_06525085.1| thymidylate kinase [Fusobacterium sp. D11] gi|289717262|gb|EFD81274.1| thymidylate kinase [Fusobacterium sp. D11] Length = 225 Score = 41.6 bits (96), Expect = 0.075, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNE 116 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|227832501|ref|YP_002834208.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] gi|262183633|ref|ZP_06043054.1| thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] gi|227453517|gb|ACP32270.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] Length = 206 Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust. Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 11/186 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS-CGVDE 61 + IS EGI+GAGK T + +R + DV V P + A+ A+ L G Sbjct: 1 MLISIEGIDGAGKNT---ITQRLREELACDVEVLSFPRYEDSIHAQLAQEALYGRMGDLT 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +FA R E ++ A +L+ DR++ S+ AY R + L +D + Sbjct: 58 DSVYGMATLFALDRRGAKEQLLAAAESTDSLLILDRYVASNAAYSSARVGGE-LIVDWIY 116 Query: 122 EISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ + +P I LD V + +R R + E D +ER D + + + Sbjct: 117 ELEFERFGLPVPQLQIFLDTDVALAGQRAVARAAEDEGRNRDRYER-DAALQSRTAAAYR 175 Query: 179 DIARNQ 184 +A Q Sbjct: 176 RLAEQQ 181 >gi|120402750|ref|YP_952579.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1] gi|119955568|gb|ABM12573.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1] Length = 211 Score = 41.6 bits (96), Expect = 0.076, Method: Compositional matrix adjust. Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 22/191 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDE 61 + I EG++GAGK T + L+ + V P PA AA + + G Sbjct: 1 MLIVIEGVDGAGKRTLTNGLRAAFESDGRSVATLAFPRYGVSVPADLAAEALHGAHGDLA 60 Query: 62 FGAEAEAIVFAAAR------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----D 110 A A++FA R +DH+++ ++L DR++ S+ AY R D Sbjct: 61 ESVYAMAVLFAMDRAGARDEIDHLKSAY-------DVVLLDRYVASNAAYSAARLHQGVD 113 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++ L+ ++ PD ++LD+P ++ +R +R + D +ER D + Sbjct: 114 GDVAAWVGDLEYGRLRLPKPDWQVLLDVPTELAAQRAVSRAAREADRARDAYERDD-GLQ 172 Query: 171 EKRRQIFLDIA 181 + ++ ++A Sbjct: 173 RRTSAVYAELA 183 >gi|300120775|emb|CBK21017.2| unnamed protein product [Blastocystis hominis] Length = 208 Score = 41.6 bits (96), Expect = 0.080, Method: Compositional matrix adjust. Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 20/153 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI EG++ +GKT S R ++R N + +T + G P R + ++ Sbjct: 1 MKRGVFIVIEGVDRSGKT---SQCHRIVERLNAE-DITAKFYGFP----NRTTQIGQQIN 52 Query: 61 EFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 ++ A I +F+A R + ++++ L G ++CDR++ S AY R Sbjct: 53 KYLQNATEIENHCVHLLFSANRWELSKSILED-LKNGVNIICDRYIASGVAYSVTRGLDM 111 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + S + + PD T L+LP++ ++R Sbjct: 112 EWCIHSDKGLPA----PDVTFQLELPIEEQMRR 140 >gi|51599045|ref|YP_073233.1| thymidylate kinase [Borrelia garinii PBi] gi|51573616|gb|AAU07641.1| thymidylate kinase [Borrelia garinii PBi] Length = 202 Score = 41.6 bits (96), Expect = 0.081, Method: Compositional matrix adjust. Identities = 45/210 (21%), Positives = 88/210 (41%), Gaps = 24/210 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP + + L++ + Sbjct: 8 FYCIEGIDGSGKTSISNKLKTLCNDES-RYYFTKEPSNGIIGKMIKEQLMNFK-NPLKES 65 Query: 66 AEAIVFAAARLDHVEN---VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ ++ + K ++ DR+L SS AYQG E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIKTDPNIAYERIQ-----KNRTQSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSFQ----SVATNILNIV 208 + +++ +S + A I N++ Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLI 200 >gi|327267155|ref|XP_003218368.1| PREDICTED: thymidylate kinase-like [Anolis carolinensis] Length = 212 Score = 41.6 bits (96), Expect = 0.086, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 21/214 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T L L K + + R P T L+S +++ Sbjct: 6 GALIVLEGVDRAGKSTQSRRLVEALGAKGHRAELLRFPERTTKIGQ----LISSYLEKKN 61 Query: 64 AEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + V F+A R + V +I+ L +G L+ DR+ S A+ G + ++ L+ Sbjct: 62 NLEDHTVHLLFSANRWEQVP-LIKEKLNQGITLVVDRYAFSGVAFTG---AKENFSLEWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L KR E++ EK Q + D+ Sbjct: 118 KQPDVGLPKPDVILFLQLNTSEAAKRGDFGSERYENSSF----------QEKVLQCYYDL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ ++D++ + + + I +IV E +Q+ Sbjct: 168 MEDKTLNWKVIDASKTIEDLHNEIKSIVEEAMQE 201 >gi|237742316|ref|ZP_04572797.1| thymidylate kinase [Fusobacterium sp. 4_1_13] gi|229429964|gb|EEO40176.1| thymidylate kinase [Fusobacterium sp. 4_1_13] Length = 228 Score = 41.6 bits (96), Expect = 0.087, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGT---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNK 116 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKEEYLRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|256076848|ref|XP_002574721.1| thymidylate kinase [Schistosoma mansoni] gi|238659934|emb|CAZ30954.1| thymidylate kinase [Schistosoma mansoni] Length = 235 Score = 41.6 bits (96), Expect = 0.090, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 9/113 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLS 56 M+ G+F+ EG + GKTT SLL + L QR+ V TP L Sbjct: 5 MSQGIFVVLEGADRVGKTTQASLLAKALSEITQRETLSVKFPDR--DTPLGHHLDSYL-- 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 G+ + A ++F A R + + IR A+ G ++ DR++ S AY + Sbjct: 61 SGIGDINKHALHLLFTANRWER-QAEIRKAISNGIPVVADRYIYSGIAYTAAK 112 >gi|294785116|ref|ZP_06750404.1| dTMP kinase [Fusobacterium sp. 3_1_27] gi|294486830|gb|EFG34192.1| dTMP kinase [Fusobacterium sp. 3_1_27] Length = 225 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNE 116 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKEEYLRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|39939007|ref|NP_950773.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|39722116|dbj|BAD04606.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 204 Score = 41.2 bits (95), Expect = 0.095, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 39/178 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEGI+G+GKT+ I L+ P + + G G E Sbjct: 4 LIVFEGIDGSGKTSLIHALQ-------------------PLLKTPHQLYQGLGSSSLGKE 44 Query: 66 AEAIVFAAARLDHVENV---------IRPALMEGK-ILLCDRFLDSSYAYQ----GERDS 111 + ++D++ I+ L + K +++ DR+L S+YAYQ + Sbjct: 45 IRDLFLNFQQVDYLTRFYLSLANMAQIQVELFKNKQLIILDRWLPSTYAYQLFPFFKEKK 104 Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163 +L L + I+ + ++ PD I L++ IG R + + S L E L YF+ Sbjct: 105 LTNLPLKQIFNINHETILKKPDLLIYLEIDPQIGKTRKKKQKSHQRDLIERKSLTYFQ 162 >gi|328867446|gb|EGG15828.1| thymidylate kinase [Dictyostelium fasciculatum] Length = 214 Score = 41.2 bits (95), Expect = 0.096, Method: Compositional matrix adjust. Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPG-GTPAAEAARHVLLSCG 58 M GLFI FEG + GK+T + L +L+ D V R P TP L + Sbjct: 8 MKRGLFILFEGADRVGKSTQVQKLGDYLKNGLQLDAKVLRFPDRTTPTGSIINGYLQNT- 66 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 + A +++AA R + +N+++ L G ++ DR+ S AY + Sbjct: 67 -TQLDDRAIHLLYAANRWEAKDNLMK-LLNSGTSIVVDRYSYSGVAYTAAK 115 >gi|40556108|ref|NP_955193.1| CNPV170 thymidylate kinase [Canarypox virus] gi|40233933|gb|AAR83516.1| CNPV170 thymidylate kinase [Canarypox virus] Length = 212 Score = 41.2 bits (95), Expect = 0.10, Method: Compositional matrix adjust. Identities = 44/222 (19%), Positives = 95/222 (42%), Gaps = 16/222 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI EG++ +GKT L +++ K Y + P + L ++ Sbjct: 1 MQRGMFIVLEGLDRSGKTVQCEKLLQYMLEKGYKTESLKFPNRETEIGKVINSYLEKKIN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F+A R + + ++I+ L L+ DR+ S A+ ++ ++ L+ Sbjct: 61 -INDRAIHLLFSANRWE-LADLIKDKLSHNINLIVDRYAFSGAAFTAAKN---NVSLEWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +PD I LD+ + S RE+ ++ +E ++ R+ F D+ Sbjct: 116 KLTDSGLPLPDLVIFLDISA--------SESSDRENFGMERYET--ASFQDEVRKRFYDL 165 Query: 181 ARNQPD-RCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + ++D+ + + + I +V +++ K P+ S Sbjct: 166 IKGTDSINWKVIDATKTIEDIHEEIKLLVEDVIDKLNDPIGS 207 >gi|294658466|ref|XP_460810.2| DEHA2F10252p [Debaryomyces hansenii CBS767] gi|202953154|emb|CAG89151.2| DEHA2F10252p [Debaryomyces hansenii] Length = 218 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 53/236 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ +GK+T +L R PGG R + ++ Sbjct: 1 MGRGQLILIEGLDRSGKSTQSGILSE------------RLPGGKLIKFPDRSTKVGSIIN 48 Query: 61 EFGAEAEA--------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--- 109 E+ +E ++F+A R + ++++ L +G ++ DR++ S AY + Sbjct: 49 EYLTNSELNLSDQTAHLLFSANRWELADSIVND-LNKGHFIVMDRYIYSGIAYSLAKSRF 107 Query: 110 --DSSQHLF-LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 DSS + +D L PD TI L L L+ + NR E + +E+++ Sbjct: 108 SNDSSPEMASIDWLYSPDKGLPKPDLTIFLTL----SLEELSNRKGWGE----ERYEKEN 159 Query: 167 VMIHEKRRQIFLDIARNQPD-RCHIVDSAHSFQSVATNILNI------VWELVQKR 215 + + FL++ D HI+D N LNI +W+L++++ Sbjct: 160 --FQKSVKNCFLEVLNADNDASVHIID---------VNNLNIDQVTAKIWDLIEQK 204 >gi|223938821|ref|ZP_03630709.1| thymidylate kinase [bacterium Ellin514] gi|223892519|gb|EEF58992.1| thymidylate kinase [bacterium Ellin514] Length = 250 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 12/161 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I EG +G+G++T I+ L +L+ H T + G + + + + + Sbjct: 40 AGKLIVVEGADGSGRSTQIARLVEWLEGCG---HATVQVGLKRSTLVSEELNQAQHGNIL 96 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ +A D +EN+I PAL G ++L DR++ + A RD + + L+ Sbjct: 97 SHTTLSLFYATDFADQLENMILPALKAGFMVLADRYIYTLMA----RDLVRGMDEAWLKN 152 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + ++PD L++ + + VQ ++ S LDY+E Sbjct: 153 LYSIALVPDAVFYLNVSPE---QLVQRNFAKNHS--LDYWE 188 >gi|254671909|emb|CBA04216.1| Thymidylate kinase [Neisseria meningitidis alpha275] Length = 81 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 6/79 (7%) Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189 PD T++LD+P+++ + R+ +S D FE++ + R ++L+ A P+R Sbjct: 3 PDLTLLLDVPLEVSMARIG------QSREKDRFEQEQADFFMRVRSVYLNRAAACPERYA 56 Query: 190 IVDSAHSFQSVATNILNIV 208 I+DS S V NI ++ Sbjct: 57 IIDSNRSLDEVRNNIEKVL 75 >gi|34764303|ref|ZP_00145140.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885923|gb|EAA23262.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 228 Score = 41.2 bits (95), Expect = 0.11, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLGGT---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-----ER 109 FG +A + ++A R + ++ +++ DR++ S+ +Q + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNK 116 Query: 110 DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + ++L +L L+ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKEEYLRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|256845595|ref|ZP_05551053.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2] gi|256719154|gb|EEU32709.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2] Length = 228 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLGGT---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-----ER 109 FG +A + ++A R + ++ +++ DR++ S+ +Q + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNK 116 Query: 110 DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + ++L +L L+ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKEEYLRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|304438544|ref|ZP_07398483.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368382|gb|EFM22068.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 231 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 61/154 (39%), Gaps = 22/154 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----- 55 M G E +G+GK T LL + L R+ + V P AA+A+ V + Sbjct: 1 MARGKLFIIEAGDGSGKETQTRLLTQRLIREGHRVRAVAFP--DYAADASMPVRMYLRGD 58 Query: 56 -SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-------G 107 DE A + FA R R G I+L DR+ S+ +Q Sbjct: 59 FGTQADEVNPYAASTFFAVDRYASYRMKWREDYAAGTIILADRYTTSNMVHQAVKIGDAA 118 Query: 108 ERDSSQHLFLDSLQEISVQEV---MPDCTIILDL 138 ERD+ FLD L + ++ +PD LD+ Sbjct: 119 ERDA----FLDWLYDFEFNKLGLPVPDAVFFLDM 148 >gi|262068171|ref|ZP_06027783.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693] gi|291378114|gb|EFE85632.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693] Length = 224 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L + Sbjct: 2 GKIIVVEGTDSSGKETQTKLLYERV-KKVYDKTIKISFPNYDSPACEPVKMYLAG----K 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + Sbjct: 57 FGTDATKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDTE 116 Query: 112 SQHLFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++ +L+ L ++ ++ PD I L +P+D + ++NR +D E+KD Sbjct: 117 AKDDYLNWLVDLEYKKNEIPEPDMVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|313893344|ref|ZP_07826918.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412] gi|313442113|gb|EFR60531.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412] Length = 228 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 16/152 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL L ++ + V P A + L+ EFG Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLIKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-- 114 + + ++A R G I++ DR+ S+ +Q + Q Sbjct: 59 KDVHDVNPYVASSMYAIDRFASFRTDWEEFYKNGGIIIADRYTTSNMVHQMVKYDDQKER 118 Query: 115 -LFLDSLQEISVQEV---MPDCTIILDLPVDI 142 FLD L++ ++ PD +LD+P+++ Sbjct: 119 TAFLDWLEDFEFKKFGLPTPDAVCLLDMPLEV 150 >gi|169776481|ref|XP_001822707.1| thymidylate kinase [Aspergillus oryzae RIB40] gi|83771442|dbj|BAE61574.1| unnamed protein product [Aspergillus oryzae] Length = 225 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 28/209 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK++ L+ +LQ + V R P T A L G + Sbjct: 12 GALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLR-GQSQLD 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F+A R + + VI + +G ++ DR+ S Y Sbjct: 71 DHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVY------------------ 111 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN----RYSLRESACLDYF--ERKDVMIHEKR-RQI 176 S + +P ++ ++GL R R S E+A F ER + + R R++ Sbjct: 112 SAAKGIPTLSLGWAWQPEVGLPRPDMCLFLRISPTEAAKRGGFGVERYENETMQSRVREL 171 Query: 177 FLDIARNQPDR-CHIVDSAHSFQSVATNI 204 F + QP+ H+V++ SFQ V+ I Sbjct: 172 FQTLFDLQPNGDIHVVNAGRSFQEVSEEI 200 >gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus NA1] gi|229558607|sp|B6YSS1|SRP54_THEON RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus NA1] Length = 448 Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust. Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 9/74 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64 GI+G+GKTT I+ L R+ Q++ Y V + T PG A + + ++ G++ FG Sbjct: 107 GIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPG---AYQQLKQLVEPFGIEVFGDPE 163 Query: 65 EAEAIVFAAARLDH 78 E +AI A ++H Sbjct: 164 EKDAIKLAKEGVEH 177 >gi|283481645|emb|CAZ69761.1| putative thymidylate kinase [Emiliania huxleyi virus 99B1] Length = 327 Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 11/183 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVD-- 60 G EG +G GK T +LL+R L++++Y V P R +L D Sbjct: 106 GRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGDIK 165 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++A R V++++ + G ++ DR++ S+ A+QG + ++ Sbjct: 166 NLDPFLFASLYAQNRWS-VKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVAKQ 224 Query: 121 QEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 E+ E++ + I LDLP ++ + ++ + R A LD E + R+I Sbjct: 225 TELFENEILGLPHANHIIYLDLPPEVA-RTAMDKDTTR--AALDQNELAPLEYKNNVRKI 281 Query: 177 FLD 179 +L+ Sbjct: 282 YLE 284 >gi|255536995|ref|XP_002509564.1| thymidylate kinase, putative [Ricinus communis] gi|223549463|gb|EEF50951.1| thymidylate kinase, putative [Ricinus communis] Length = 264 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 6/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++ +GKT+ L +L+R ++ + R P T LS + Sbjct: 59 GAFIVLEGLDRSGKTSQCGKLVSYLERLGHETELWRFPDRTTTIGQMISAYLS-NQSQLD 117 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++++A R + +++ L G L+ DR+ S A+ +++ L + + Sbjct: 118 DRTIHLLYSANRWEK-NSLMETKLKSGTTLIVDRYSYSGVAF----SAAKGLDFEWCKAP 172 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + + PD + LD+P + +R Sbjct: 173 EIGLLAPDLVLYLDIPPEKAAER 195 >gi|302851470|ref|XP_002957259.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f. nagariensis] gi|300257509|gb|EFJ41757.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f. nagariensis] Length = 546 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 12/154 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDE 61 G I FEG + GKTT L L+ + D + R P + + A + L +D+ Sbjct: 13 GALIVFEGGDRCGKTTQCRKLVERLRSQGVDAVMWRFPDRSTSIGQAINAYLVEQSHMDD 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++FAA R++ E ++R L+ G+ L+ DR+ S AY + HL +D Sbjct: 73 AVAH---LLFAANRMEKREEMLR--LLSGRTTLVVDRYSYSGVAYTAAK-GVPHLSMDYC 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRY 151 + + V D I +D+ + R Q RY Sbjct: 127 RAVEVGLPAADLVIFMDMTAEATAARGGYGQERY 160 >gi|237740226|ref|ZP_04570707.1| thymidylate kinase [Fusobacterium sp. 2_1_31] gi|229422243|gb|EEO37290.1| thymidylate kinase [Fusobacterium sp. 2_1_31] Length = 224 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L + Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAG----K 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + ++ +++ DR++ S+ +Q + Sbjct: 57 FGTDATKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDAE 116 Query: 112 SQHLFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++ +L+ L ++ ++ PD I L +P+D + ++NR +D E+KD Sbjct: 117 AKDEYLNWLVDLEYKKNEIPEPDIVIFLKMPIDKAKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|54026585|ref|YP_120827.1| thymidylate kinase [Nocardia farcinica IFM 10152] gi|54018093|dbj|BAD59463.1| putative thymidylate kinase [Nocardia farcinica IFM 10152] Length = 215 Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust. Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 14/188 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 GL I+ EG++GAGK T + L + P G + A+ A L D Sbjct: 2 GLLIALEGLDGAGKRTLTDAVVAALGARGVRAATLGFPRYGRSVHADLAAEALHGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116 A A++FA LD E + + AL + I++ DR++ S+ AY R S+ Sbjct: 62 ASSVYAMALLFA---LDRAEARDELSKALADNDIVILDRYVASNAAYNAARLHQSATGEI 118 Query: 117 LDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + ++ PD ++LD+ ++ +R + R L LD +ER D + + Sbjct: 119 VGWTADLEFGRFGLPEPDVQLLLDVDTEVAAERARRRTELDADRPLDAYER-DGGLQRRT 177 Query: 174 RQIFLDIA 181 ++ ++A Sbjct: 178 LAVYRELA 185 >gi|71030486|ref|XP_764885.1| thymidylate kinase [Theileria parva strain Muguga] gi|68351841|gb|EAN32602.1| thymidylate kinase, putative [Theileria parva] Length = 213 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEGI+ +GK+T I LL + L +N V P T L + Sbjct: 9 GKLIVFEGIDRSGKSTQIRLLSQKLSEENIKNEVLTFPYKTTPTGKLLRSYLGNRDESIP 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 +A ++F+A R + + +I+ L G ++ DR+ S AY Sbjct: 69 KQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAY 109 >gi|241613926|ref|XP_002407467.1| thymidylate kinase, putative [Ixodes scapularis] gi|215502816|gb|EEC12310.1| thymidylate kinase, putative [Ixodes scapularis] Length = 214 Score = 40.8 bits (94), Expect = 0.14, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 81/197 (41%), Gaps = 15/197 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+ FEG + GKTT I LL L + + P + L D Sbjct: 7 GLFVVFEGCDRTGKTTQIKLLSESLSKLGHKTETVAFPNRSTTTGTLLDSYLKASTD-LD 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + +++ L ++ DR+ S A+ +++ L Q+ Sbjct: 66 DHAVHLLFSANRWEAAPSLL-STLARNTTVIADRYAYSGVAFS----AAKSLDFRWCQQC 120 Query: 124 SVQEVMPDCTIILDLPVD-------IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 V PD + + +P + G +R +N S +E +Y + + R I Sbjct: 121 DVGLPEPDLVLYMSVPPETLAARGGFGEERYENS-SFQEKVRANYNHLASLEA-KGGRWI 178 Query: 177 FLDIARNQPDRCHIVDS 193 +D +++ + HI++S Sbjct: 179 EVDCSKSVQEVHHIIES 195 >gi|237845145|ref|XP_002371870.1| thymidylate kinase, putative [Toxoplasma gondii ME49] gi|211969534|gb|EEB04730.1| thymidylate kinase, putative [Toxoplasma gondii ME49] gi|221480782|gb|EEE19211.1| thymidylate kinase, putative [Toxoplasma gondii GT1] gi|221501447|gb|EEE27223.1| thymidylate kinase, putative [Toxoplasma gondii VEG] Length = 273 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G + FEGI+ +GK+T L L ++ + + R P TP + L + Sbjct: 9 GCLVVFEGIDRSGKSTQARLAYERLTKEGHAAELIRFPDRTTPIGQVLDRFLANASWSSD 68 Query: 63 GAEAEA-------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 G + ++FAA R + ++R AL EG+ +L DR+ S AY Sbjct: 69 GQHPQVPPPQLTHLLFAANRWEAQARILR-ALGEGRTVLVDRYSFSGIAY 117 >gi|167042320|gb|ABZ07049.1| putative Thymidylate kinase [uncultured marine crenarchaeote HF4000_ANIW97J3] Length = 292 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 14/152 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVD 60 S L I+ EG++ AGK T +L + L+R V P + E H+ G Sbjct: 99 SVLIIAIEGLDQAGKKTQTEMLVKALRRIKIKTAVFSFPDYSTIIGKEIKNHL---SGKR 155 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F E ++AA RL+ +E I+ A + +L+ +R+ S+ Y G + + +L L Sbjct: 156 NFPPEIIHYLYAANRLEKLEE-IQKASSKNSVLVMNRYYHSNLVY-GIANGLKEKWLQKL 213 Query: 121 QEISVQEVMP--DCTIILDLPVDIGLKRVQNR 150 +E +P D I+LD D R +++ Sbjct: 214 -----EEGLPKADLVIVLDASQDDSFSRKKSK 240 >gi|218513048|ref|ZP_03509888.1| thymidylate kinase [Rhizobium etli 8C-3] Length = 51 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 26/35 (74%) Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 FLDIA +P+RCH+V++ + +++A IL IV +L Sbjct: 1 FLDIAAREPERCHVVNAMQTEEAIAAQILAIVKQL 35 >gi|195436525|ref|XP_002066218.1| GK22056 [Drosophila willistoni] gi|194162303|gb|EDW77204.1| GK22056 [Drosophila willistoni] Length = 209 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 3/106 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M G FI FEG + +GKTT LL LQ VH+ + + L+ Sbjct: 1 MQRGAFIVFEGCDRSGKTTQSRLLVEKLQANGVSTVHLNFPERKSSQIGQVINSYLTNSQ 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 D E ++F+A R +H+ N +R L G L+ DR+ S AY Sbjct: 61 D-LPDEVIHLMFSANRWEHL-NRMRKQLEAGTTLVVDRYSYSGVAY 104 >gi|220929912|ref|YP_002506821.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10] gi|220000240|gb|ACL76841.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10] Length = 230 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 11/100 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGV 59 G+ I FEGI G GK+ + L+++L K Y V + + + LL+ GV Sbjct: 12 GMLIVFEGISGCGKSESVEALRKYLSDKGYKTSVLEWNSNKIIRKITKAIDSIKLLTPGV 71 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99 F + + +D+ V+ P L + IL+ DR++ Sbjct: 72 YSF------LQWIGFLIDYFFKVV-PLLKKNYILIADRYI 104 >gi|319442834|ref|ZP_07991990.1| thymidylate kinase [Corynebacterium variabile DSM 44702] Length = 236 Score = 40.8 bits (94), Expect = 0.15, Method: Compositional matrix adjust. Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 26/178 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63 + I+FEGI+GAGK T ++ L+ L + ++ V R P E + H L+ G Sbjct: 1 MIIAFEGIDGAGKNTVVTALEAELIAR--EIPVARL--AFPRYETSVHAQLASAALHGGM 56 Query: 64 ------AEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGER------ 109 A A +FA LD E +G ++L DR++ S+ AY R Sbjct: 57 GDLVDSAYGMATLFA---LDRAEVAAELTGFDEDGYVVLLDRWVASNAAYSAARLSQDAS 113 Query: 110 ---DSSQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 +SS+ + ++D L+ + +PD +++++P + RV R +D +E Sbjct: 114 AGGESSEVVAWVDDLEFTQLGIPVPDLQVLVNVPDSVTAGRVAARAEEDAGRGVDAYE 171 >gi|255323824|ref|ZP_05364950.1| dTMP kinase [Corynebacterium tuberculostearicum SK141] gi|255299004|gb|EET78295.1| dTMP kinase [Corynebacterium tuberculostearicum SK141] Length = 204 Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust. Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 3/162 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T +S LK R + R A A + + G A Sbjct: 1 MLISIEGIDGAGKNTLVSALKESFDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122 A A +FA R V++ ++ A ++L DR++ S+ AY R D + ++ L+ Sbjct: 61 YAMATLFALDRY-GVKDQLQRAKESDTVVLLDRYVASNAAYSAARLEDDAVMEWVHDLEF 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 ++ D + LD V++ +R Q R S D +ER Sbjct: 120 GTLCLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER 161 >gi|218132360|ref|ZP_03461164.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC 43243] gi|217992698|gb|EEC58700.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC 43243] Length = 235 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 72/184 (39%), Gaps = 44/184 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKR--------------------------------FLQRKN 32 + ISF G +GAGKTTHI LLK+ + Q + Sbjct: 1 MIISFTGCDGAGKTTHIDLLKKRICNSCKLSGINLLDITNGVLVYENIRDIDLIYKQLEK 60 Query: 33 YDVHVTREPGGTP-AAEAARHVLLSCGVDEFGAEAEAI--VFAAARLDH---VENVIRPA 86 YDV VTR + E R + L G+D +E I V + D E+VI Sbjct: 61 YDVIVTRFYMKSKLCNEEQRKIRL--GLDSVFNNSERIRKVLDCVKTDSDIWREHVISKL 118 Query: 87 LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 KI++ DR+ AY+ S +L L +++ + PD + L D +R Sbjct: 119 HERNKIIIVDRYYYDEVAYR----SMYNLGLYEVEQYFCDAIKPDLSYALLASFDEIRQR 174 Query: 147 VQNR 150 NR Sbjct: 175 NNNR 178 >gi|317061547|ref|ZP_07926032.1| thymidylate kinase [Fusobacterium sp. D12] gi|313687223|gb|EFS24058.1| thymidylate kinase [Fusobacterium sp. D12] Length = 226 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 65/153 (42%), Gaps = 18/153 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 N G I EG + +GK T LL ++FL + ++ +PA E + L Sbjct: 4 NMGKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYL----AG 59 Query: 61 EFGAEAEAI----VFAAARLDHVENVIRPA----LMEGKILLCDRFLDSSYAYQ-----G 107 EFG +AE + V A +D + + E + + DR++ S+ +Q G Sbjct: 60 EFGLDAEKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQG 119 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPV 140 E +L++L+ Q PD I LD+P Sbjct: 120 EEKEHYLSWLETLEYEQFQIPRPDFVIFLDMPT 152 >gi|73852905|ref|YP_294189.1| putative thymidylate kinase [Emiliania huxleyi virus 86] gi|72415621|emb|CAI65858.1| putative thymidylate kinase [Emiliania huxleyi virus 86] Length = 327 Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVD-- 60 G EG +G GK T +LL+R L++++Y V P R +L D Sbjct: 106 GRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGDIK 165 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++A R V++++ + G ++ DR++ S+ A+QG + ++ Sbjct: 166 NLDPFLFASLYAQNRWS-VKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVAKQ 224 Query: 121 QEISVQEVM----PDCTIILDLPVDIG 143 E+ E++ + I LDLP ++ Sbjct: 225 TELFENEILGLPHANHIIYLDLPPEVA 251 >gi|310659451|ref|YP_003937172.1| thymidylate kinase [Clostridium sticklandii DSM 519] gi|308826229|emb|CBH22267.1| putative thymidylate kinase [Clostridium sticklandii] Length = 231 Score = 40.4 bits (93), Expect = 0.19, Method: Compositional matrix adjust. Identities = 36/159 (22%), Positives = 62/159 (38%), Gaps = 16/159 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF+ G + +GK T LL L+ Y+V P + A + L +FG+ Sbjct: 4 LFVVESGSDASGKATQTELLYNKLKMDGYNVRKIEFPNYKSESSALVKMYLRG---DFGS 60 Query: 65 EAE-------AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114 + E + +A R + G I++ DR+ S+ +Q + + + Sbjct: 61 KPEDVNPYITSTFYAVDRYASFKTSWEEFYNNGGIIIADRYTTSNMVHQAAKYDDYNDKD 120 Query: 115 LFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 FL L E P L++PV+ K ++NR Sbjct: 121 KFLQWLDEYEFDFYGLPRPTKVFFLNMPVEFSFKLMKNR 159 >gi|300790592|ref|YP_003770883.1| dTMP kinase [Amycolatopsis mediterranei U32] gi|299800106|gb|ADJ50481.1| dTMP kinase [Amycolatopsis mediterranei U32] Length = 703 Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 48/93 (51%) Query: 45 PAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 PA + R L G GA A+A+ AA R D VE ++PAL G +++ +RF+DS A Sbjct: 517 PALDDQRLAALVSGASLTGARAQALAAAAVRADIVERHVQPALDAGSVVVMERFVDSPLA 576 Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILD 137 + L+ L + + + PD TI+LD Sbjct: 577 HLSAVAGLDSDELEGLADWATGRLRPDMTILLD 609 >gi|238928063|ref|ZP_04659823.1| thymidylate kinase [Selenomonas flueggei ATCC 43531] gi|238884023|gb|EEQ47661.1| thymidylate kinase [Selenomonas flueggei ATCC 43531] Length = 231 Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 58/148 (39%), Gaps = 10/148 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----S 56 M G E +G+GK T LL + L R+ + V P A + L Sbjct: 1 MARGKLFIIEAGDGSGKETQTRLLAQRLIREGHRVRAVAFPDYEADASMPVRMYLRGDFG 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQH 114 DE A + FA R R G I+L DR+ S+ +Q RD+++ Sbjct: 61 MQADEVNPYAASTFFAVDRYASYRMKWRQDYEAGTIILADRYTTSNMVHQAVKIRDAAER 120 Query: 115 -LFLDSLQEISVQEV---MPDCTIILDL 138 FLD L + ++ +PD LD+ Sbjct: 121 DAFLDWLDDFEFNKLGLPVPDAVFFLDM 148 >gi|325108330|ref|YP_004269398.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305] gi|324968598|gb|ADY59376.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305] Length = 228 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 10/154 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCG-VDE 61 FI+ EGI+G+GK T + L L + + R + R + G +D Sbjct: 4 FIAIEGIDGSGKGTQTAALCDHLNAQGLRCDTITFPRYAETLLGKQIGRFLDGQFGALDH 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHL-F 116 ++++A R + ++I L +L+ DR++ S+ A+QG R + ++ L F Sbjct: 64 LHPVPISLMYATERYES-RSLIEEKLNNCDVLIADRYVGSNLAHQGARLEGDERAEFLKF 122 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 ++ L+ P+ ++LDLP D RV + Sbjct: 123 IEKLEYELFAVPRPELVLLLDLPADASAARVAKK 156 >gi|282174114|ref|YP_003358216.1| ORF77 [Anguillid herpesvirus 1] gi|281308957|gb|ADA57840.1| ORF77 [Anguillid herpesvirus 1] Length = 214 Score = 40.0 bits (92), Expect = 0.21, Method: Compositional matrix adjust. Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 7/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG + GK+T + L VH + G T R + V Sbjct: 16 GRLIAVEGCDRTGKSTLCARLAETWPESITAVHFPKMEG-TFTGSVLRTAFKTPFVRS-N 73 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + + + I L +GKI++CDR+ S AY + Q + Sbjct: 74 PRIMHLLFSANRWE-LMDFIGAELAKGKIVVCDRYFGSGLAYSMVKGLDQEW----CEGP 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + + PD TI LD P+ +KR Sbjct: 129 DRRLIQPDATIYLDAPLSALMKR 151 >gi|109101748|ref|XP_001094132.1| PREDICTED: thymidylate kinase-like isoform 2 [Macaca mulatta] Length = 212 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 27/207 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G I EG++ AGK+T L L + + R P + E + LLS ++ Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFP--ERSTEIGK--LLSSYLEKKS 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 62 DVEDHAVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGVAFTG---AKENFSLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ V PD + L L + KR RY R E+ Q F Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKRGAYGHERYENR-------------AFQERALQCF 164 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 + R+ +VD++ S ++V +I Sbjct: 165 HQLMRDTTLNWKMVDASKSIEAVHEDI 191 >gi|111223133|ref|YP_713927.1| putative thymidylate kinase [Frankia alni ACN14a] gi|111150665|emb|CAJ62366.1| putative Thymidylate kinase (dTMP kinase) [Frankia alni ACN14a] Length = 263 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 35/147 (23%), Positives = 56/147 (38%), Gaps = 3/147 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAE 65 I+ G++G GKTT L R L GG P + AR + G D G Sbjct: 10 IALLGVDGVGKTTQARRLARTLTAAGQPASYFENGGGRPLLDPLARRLGRRDGPDLLGRR 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 V A R + + + + G+I + DR+ YA G R + + + Sbjct: 70 VHVAVEATYRGLAITRALALSRLTGRIAVMDRYTYCQYAVMGLRGDGTGDDDGARRVRAA 129 Query: 126 QEV--MPDCTIILDLPVDIGLKRVQNR 150 +PD ++ P + +RV+ R Sbjct: 130 YRRFPLPDLVVLFTAPATLAQQRVERR 156 >gi|159467731|ref|XP_001692045.1| hypothetical protein CHLREDRAFT_128562 [Chlamydomonas reinhardtii] gi|158278772|gb|EDP04535.1| predicted protein [Chlamydomonas reinhardtii] Length = 214 Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 5/135 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + GKTT S + L+ + D + R P + + AA + LS + Sbjct: 9 GALIVFEGGDRCGKTTQCSKMVERLKSQGVDAVMWRFPDRSTSIGAAINAYLS-NQSQLD 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F A RL+ + ++R L G L+ DR+ S AY + HL +D + + Sbjct: 68 DAVIHMLFVANRLEKRDEMLR-LLAGGTTLVLDRYSYSGVAYTAAK-GVPHLSIDYCKSL 125 Query: 124 SVQEVMPDCTIILDL 138 V V+P +++ + Sbjct: 126 EV--VLPAADLVVHM 138 >gi|15078963|ref|NP_149714.1| 251L [Invertebrate iridescent virus 6] gi|82012170|sp|Q91FS1|KTHY_IIV6 RecName: Full=Putative thymidylate kinase 251L; AltName: Full=dTMP kinase gi|15042332|gb|AAK82112.1|AF303741_251 251L [Invertebrate iridescent virus 6] Length = 213 Score = 40.0 bits (92), Expect = 0.23, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 2/102 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL I FEG + GK+T LL L++KN +V + P T L G Sbjct: 14 GLLIVFEGCDKTGKSTQCKLLFEELKQKNIEVRMINFPNRTTQTGKLIDQYLK-GKIYLS 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 E I+F+ R + ++ I+ ++ G ++ DR+ S A+ Sbjct: 73 DEDIHILFSKNRWEIID-TIKTNILNGITVIIDRYSYSGIAF 113 >gi|219669039|ref|YP_002459474.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2] gi|219539299|gb|ACL21038.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2] Length = 225 Score = 40.0 bits (92), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 71/184 (38%), Gaps = 24/184 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T L R L + V P + + + + L EFG Sbjct: 2 GKLIIIEGGDGSGKATQTRKLWRRLADEGLQVKKVEFPNYSSPSSSLVTMYLGG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113 + + +A R + + G I+L DR+ S+ +Q + + Sbjct: 59 TDPNGVNPYTASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGW 118 Query: 114 HLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L++ + + PD I L++P D+ ++ + R D IH Sbjct: 119 ASYLDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIQFIAGRADKSSVTSQD--------IH 170 Query: 171 EKRR 174 EK + Sbjct: 171 EKNK 174 >gi|167750887|ref|ZP_02423014.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702] gi|167656066|gb|EDS00196.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702] gi|291557390|emb|CBL34507.1| thymidylate kinase [Eubacterium siraeum V10Sc8a] Length = 222 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 24/168 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLK-------RFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 G EG++G GK+T + +LK RF+ NY+ + + E + L Sbjct: 9 GKLFVIEGLDGCGKSTQLEMLKASADSNIRFISFPNYN---------SASGEIIKDYLSG 59 Query: 57 CGVDE---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DS 111 +E GA +A R + GK ++ R+ S+ YQ + S Sbjct: 60 KFCEENGRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKS 119 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRES 156 +L+ L++ + P+ I LD+PV++ K + RY E+ Sbjct: 120 RWDEYLEWLEDYEYDKFAIPRPERIIFLDMPVEVSQKLLSARYGGDEA 167 >gi|47212537|emb|CAF90553.1| unnamed protein product [Tetraodon nigroviridis] Length = 166 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 2/95 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGKTT L + LQ + + R P T A L E Sbjct: 6 GALIVLEGVDKAGKTTQCKKLVQALQERGQPAEMMRFPDRTTAIGQLISAYLE-NKSELT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + ++FAA R + V +I+ L +G L+ DR+ Sbjct: 65 DQTVHLLFAANRWEMVP-LIKKKLQQGTTLVVDRY 98 >gi|290558930|gb|EFD92317.1| thymidylate kinase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 202 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 50/176 (28%), Positives = 72/176 (40%), Gaps = 25/176 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGV 59 G I EGI+GAGK T LLK L+ V P + A L V Sbjct: 3 GKIIVIEGIDGAGKATQSKLLKEKLESNGITVSSYSYPDYSSVYGARIKSFLYKEIKIKV 62 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQH 114 DE +F +D V E +I L G ++ DRF S+ AYQ G D Sbjct: 63 DE--------LFMLYLIDMVKDREKMINE-LKSGNYIIIDRFFFSTIAYQSAGGFDYDNC 113 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L ++ V P+ T +D+PVD+ + R + + + +D FE V + Sbjct: 114 KKIIKLFDMPV----PEITFFIDVPVDVSMSRKEKQ---KGKLDVDKFESNKVFLQ 162 >gi|225711618|gb|ACO11655.1| Thymidylate kinase [Caligus rogercresseyi] Length = 216 Score = 40.0 bits (92), Expect = 0.26, Method: Compositional matrix adjust. Identities = 42/154 (27%), Positives = 60/154 (38%), Gaps = 31/154 (20%) Query: 4 GLFISFEGIEGAGKTTHISLLK-----RFLQRKNYDVHVTRE------PGGTPAAEAARH 52 G FI EG + +GKTT L F + + D +T GGTP + H Sbjct: 9 GAFIVLEGCDRSGKTTIAKRLSDSPGFEFFRFPDRDSPLTGSLINSFLTGGTPMSSQLIH 68 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 +L F+A R + V +++ L GK ++CDR+ S AY S Sbjct: 69 LL----------------FSANRWEKVPSMLS-VLSAGKNIICDRYAYSGIAYS---SSK 108 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + D PD I LD+ + LKR Sbjct: 109 PGMDFDWCAGPDNGLPTPDLVIFLDVSPEQALKR 142 >gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus] Length = 443 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 9/77 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64 GI+G+GKTT ++ L R+ Q++ Y V V T PG A R VL ++ FG Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG---AYHQLRQVLDRYHIEVFGNPQ 163 Query: 65 EAEAIVFAAARLDHVEN 81 E +AI A +D+ ++ Sbjct: 164 EKDAIKLAKEGVDYFKS 180 >gi|163867844|ref|YP_001609048.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476] gi|161017495|emb|CAK01053.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476] Length = 219 Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 7/149 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F+ G +G+GKTT + + R+ ++ + + + + R L S Sbjct: 18 AGSFVVLCGFDGSGKTTQVQEISRYWAQEKHIIQTFQPSHWYRNNQEVRDYLESG--KSI 75 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A++ A R H +I P+L + ++ DR++ SS AY R L L+S+ Sbjct: 76 DPLLLALLAATDRRKHTLEIIEPSLTSSQNFIISDRYVYSSLAYFYARG----LSLESVI 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR 150 +++ P T L LP ++R+Q R Sbjct: 132 KLNQFIPRPCITFYLHLPPTAIIERLQKR 160 >gi|322795260|gb|EFZ18065.1| hypothetical protein SINV_01400 [Solenopsis invicta] Length = 208 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 11/139 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI EG + AGK+T + +L L D+ + + G P + +L+ + Sbjct: 2 LKRGAFIVLEGCDRAGKSTQVKMLINALN----DLQIPAKARGFPNRKTPVGTILNSFLS 57 Query: 61 E---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + E ++F+A R + E+ + L+ G L+ DR+ S Y L Sbjct: 58 KEINVPPETAHLLFSANRWECKED-MEKTLLSGVSLVMDRYAASGAVYTAANTGRS---L 113 Query: 118 DSLQEISVQEVMPDCTIIL 136 + Q+ + + PDC + L Sbjct: 114 NWCQQPDLGLLKPDCVMFL 132 >gi|226310244|ref|YP_002770138.1| hypothetical protein BBR47_06570 [Brevibacillus brevis NBRC 100599] gi|226093192|dbj|BAH41634.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 191 Score = 39.7 bits (91), Expect = 0.28, Method: Compositional matrix adjust. Identities = 53/221 (23%), Positives = 85/221 (38%), Gaps = 35/221 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M ++FEGI+ K +LL+ L+ Y V P A + L C + Sbjct: 1 MRQPTIVAFEGIDANAKEAQAALLEENLRCLGYKVKRVSFPRLDTPIGAVIGMWLRCEI- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +A +F A LD+ + R + ++ D + S+Y Y +D+ L Sbjct: 60 ELDEKAVGKLFEADFLDYQREMARLSKENVDFIIMDHYELSNYYYFYIKDTP----LSWY 115 Query: 121 QEISVQEVMPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +S PD T L VD L +VQ Y + H RR + Sbjct: 116 ATMSDLTKRPDATFFLRTEVDANHAMLLKVQEAYL--------------SLAHASRRSV- 160 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL-VQKRVS 217 H +D+A + + NIL +V +L ++KRV+ Sbjct: 161 -----------HTLDTAIGVERMQKNILQVVHQLHLKKRVT 190 >gi|260494279|ref|ZP_05814410.1| thymidylate kinase [Fusobacterium sp. 3_1_33] gi|260198425|gb|EEW95941.1| thymidylate kinase [Fusobacterium sp. 3_1_33] Length = 223 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 27/183 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +GK T LL + +K YD + ++ +PA E + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERV-KKIYDKTIKISFPNYDSPACEPVKMYLAGA---- 56 Query: 62 FGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DS 111 FG +A + ++A R + + +++ DR++ S+ +Q + + Sbjct: 57 FGTDATKVNPYPISTMYAIDRYASFKQDWEKKYIGDYVIITDRYVTSNMVHQASKIKDNE 116 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +L L ++ + PD I L +P+D + ++NR +D E+KD Sbjct: 117 EKDEYLKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENR-----KNKIDGSEKKD-- 169 Query: 169 IHE 171 IHE Sbjct: 170 IHE 172 >gi|89894606|ref|YP_518093.1| hypothetical protein DSY1860 [Desulfitobacterium hafniense Y51] gi|89334054|dbj|BAE83649.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 225 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/184 (22%), Positives = 72/184 (39%), Gaps = 24/184 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T L + L + V P + + + + L EFG Sbjct: 2 GKLIIIEGGDGSGKATQTRKLWQRLADEGLQVKKVEFPNYSSPSSSLVTMYLGG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113 + A+ +A R + + G I+L DR+ S+ +Q + + Sbjct: 59 TDPNAVNPYAASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGW 118 Query: 114 HLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L++ + + PD I L++P D+ ++ + R D IH Sbjct: 119 ASYLDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIRFIAGRADKSSVTSQD--------IH 170 Query: 171 EKRR 174 EK + Sbjct: 171 EKNK 174 >gi|82915445|ref|XP_729074.1| thymidylate kinase [Plasmodium yoelii yoelii str. 17XNL] gi|23485911|gb|EAA20639.1| Thymidylate kinase [Plasmodium yoelii yoelii] Length = 146 Score = 39.7 bits (91), Expect = 0.29, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 4/103 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG++ +GK+T L +L+ N V H+ T + + L F Sbjct: 15 GNFIVFEGVDRSGKSTQSKLFVEYLKNNNIQVQHLCFPNRETTIGKIITNYLKM--ESTF 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 E ++F+A R + ++ I+ L+ G ++CDR S Y Sbjct: 73 SNETIHLLFSANRWEMMDQ-IKNLLINGVWVICDRXXYSGVXY 114 >gi|303231908|ref|ZP_07318617.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6] gi|302513437|gb|EFL55470.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6] Length = 228 Score = 39.7 bits (91), Expect = 0.30, Method: Compositional matrix adjust. Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 25/196 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T L LQ + + V P A + LS +FG Sbjct: 2 GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLSG---QFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114 + +++ ++A R + +G I++ DR+ S+ +Q + D+ + Sbjct: 59 TDVDSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKR 118 Query: 115 L-FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + FL+ L++ + PD +LD+P+D+ + R D IH Sbjct: 119 VQFLEWLEDFEFVKFGLPRPDAVCLLDVPLDVTESLMSERTGKTGGETGD--------IH 170 Query: 171 EKRRQIFLDIARNQPD 186 E R ++L N D Sbjct: 171 EGNR-VYLQAVHNAYD 185 >gi|238019601|ref|ZP_04600027.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748] gi|237863799|gb|EEP65089.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748] Length = 228 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 16/152 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T LL L ++ + V P A + L+ EFG Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAG---EFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQ 113 + + ++A R G I++ DR+ S+ +Q + + Sbjct: 59 KDVHDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDLKER 118 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDI 142 FLD L++ + PD +LD+P+++ Sbjct: 119 TAFLDWLEDFEFNKFGLPTPDAVCLLDMPLEV 150 >gi|156544086|ref|XP_001605460.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate kinase) [Nasonia vitripennis] Length = 209 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI EG++ AGK+T +S++ L+ +N V P + A + L+ + Sbjct: 1 MARGAFIVLEGLDRAGKSTQVSMIVEALKERNVPVERRVFPDRSTAIGGIINDYLAKKI- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97 E EA ++F+A R + + ++ L +G L+ DR Sbjct: 60 ELAPEAVHLLFSANRWECKDGILE-TLEKGTTLIVDR 95 >gi|154496578|ref|ZP_02035274.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC 29799] gi|150274211|gb|EDN01302.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC 29799] Length = 224 Score = 39.7 bits (91), Expect = 0.31, Method: Compositional matrix adjust. Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 15/160 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG I FEG +G+GK+T + L L+++ D P + A + L+ EF Sbjct: 2 SGKLIVFEGTDGSGKSTQFAKLCERLEQEGTDFRRLIFPQYKEPSSALLRMYLN---GEF 58 Query: 63 GAE-------AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113 G A + +A R + G ++L DR+ S+ +Q + ++ Sbjct: 59 GTHPDDVNPYAASTFYAVDRYAAWKKDWGSYYQNGGLVLSDRYTTSNAVHQTCKLPEAEW 118 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 F+ L + ++ PD I LD+P D ++ ++ R Sbjct: 119 ENFIRWLFDFECGKLGLPAPDLVIYLDMPTDKAVEMLRAR 158 >gi|322712668|gb|EFZ04241.1| thymidylate kinase, putative [Metarhizium anisopliae ARSEF 23] Length = 257 Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust. Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 22/228 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++ +GKTT + LL++ + V V R P T L V + Sbjct: 23 GAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVRVMRFPDRTTPIGQMIDAYLKSDV-QME 81 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE 122 ++F+A R + V+ I+ L G ++ DRF S Y + + S L E Sbjct: 82 DHVIHLLFSANRWEAVDQ-IKTLLAAGTTVISDRFYHSGIVYSAAKLNPSLPLSWARAPE 140 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER----------KDVMIHEK 172 + PD + LDL + R L E A + R KD+ E Sbjct: 141 RGLPR--PDVVLFLDLDEETARARGGWGGELYEKAEMQKRVRELFWGLSMGGKDIQGQEM 198 Query: 173 RRQI-FLDIA--RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + L+ A R + + +VD+ S + VA I W ++ RV+ Sbjct: 199 LAGLGGLEGAQWRQEEEDLVVVDAGGSVEEVADRI----WGTLEGRVA 242 >gi|291531126|emb|CBK96711.1| thymidylate kinase [Eubacterium siraeum 70/3] Length = 222 Score = 39.7 bits (91), Expect = 0.33, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 24/168 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLK-------RFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 G EG++G GK+T + +LK RF+ NY+ + + E + L Sbjct: 9 GKLFVIEGLDGCGKSTQLEMLKASADSNIRFISFPNYN---------SASGEIIKDYLSG 59 Query: 57 CGVDE---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DS 111 +E GA +A R + GK ++ R+ S+ YQ + S Sbjct: 60 KFCEENGRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKS 119 Query: 112 SQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRES 156 +L+ L++ + P+ + LD+PV++ K + RY E+ Sbjct: 120 QWDEYLEWLEDYEYDKFAIPRPERIVFLDMPVEVSQKLLSARYGGDEA 167 >gi|238503185|ref|XP_002382826.1| thymidylate kinase [Aspergillus flavus NRRL3357] gi|220691636|gb|EED47984.1| thymidylate kinase [Aspergillus flavus NRRL3357] Length = 225 Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust. Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 20/205 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK++ L+ +LQ + V R P T A L G + Sbjct: 12 GALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYLR-GQSQLD 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F+A R + + VI + +G ++ DR+ S Y + L L + Sbjct: 71 DHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVYSAAKGIPT-LSLGWAWQP 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKR-RQIFLDI 180 V PD + L R S E+A F ER + + R R++F + Sbjct: 129 EVGLPRPDMCLFL-------------RISPTEAAKRGGFGVERYENETMQSRVRELFQTL 175 Query: 181 ARNQPDR-CHIVDSAHSFQSVATNI 204 QP+ H+V++ SF+ V+ I Sbjct: 176 FDLQPNGDIHVVNAGRSFKEVSEEI 200 >gi|296425149|ref|XP_002842105.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638364|emb|CAZ86296.1| unnamed protein product [Tuber melanosporum] Length = 214 Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 80/197 (40%), Gaps = 16/197 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG++ AGK+T LL L +N + + P T + LS Sbjct: 10 GALIAIEGLDRAGKSTQCQLLMDRLAERNVPARLQKFPDRTTPIGKMINAYLSTST-TLE 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + ++++ L +G ++ DR++ S + +++ L LD + Sbjct: 69 DHTIHLLFSANRWELSAHILK-LLNDGVTIVLDRYVYSGIVFS----AAKGLSLDYCRAP 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V D + LDL ++ +R E + + R +F ++ Sbjct: 124 DVGLPRADVVLFLDLDAEVARRRGGFGGERYEVEA----------VQRRVRDLFKEVGEK 173 Query: 184 QPDRCHIVDSAHSFQSV 200 + R +VD+ S + V Sbjct: 174 EEGRWRVVDAGRSVEEV 190 >gi|50548641|ref|XP_501790.1| YALI0C13354p [Yarrowia lipolytica] gi|49647657|emb|CAG82100.1| YALI0C13354p [Yarrowia lipolytica] Length = 204 Score = 39.3 bits (90), Expect = 0.36, Method: Compositional matrix adjust. Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 23/212 (10%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G FI+ EG++ +GK+T L+ + H+ + P TP + L S GV Sbjct: 3 GRFIAIEGLDRSGKSTQCDRLVAHLTETTGNKTHLFKFPDRSTPMGQIINQYLTS-GV-A 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A ++F+A R + +E+ I+ L +G+ ++ DR+ S Y + + + Sbjct: 61 LSDQAIHLLFSANRWERIED-IKALLEKGENVVLDRYYISGIVYTQAKGLERQWCTNPDL 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T+ L + ++ +R Y + + +R + HE + Sbjct: 120 GLPV----PDITLFLTVSPEVASQR--GAYGEERYEKIAFQKRVAALFHEVAQ------- 166 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 RN C VD++ + + VA N +N E VQ Sbjct: 167 RN----CITVDASGTEEEVA-NAINQCVETVQ 193 >gi|145505513|ref|XP_001438723.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405895|emb|CAK71326.1| unnamed protein product [Paramecium tetraurelia] Length = 216 Score = 39.3 bits (90), Expect = 0.37, Method: Compositional matrix adjust. Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 11/141 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 N G+FI+ EG++ +GK+T LL + L K G ++ R G Sbjct: 12 FNRGVFIALEGLDKSGKSTQAKLLSQKLNAKKVSFPDRTTQLGLIISDYLR------GNK 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+A R + ++++ L +G ++ DR+ S A+ +++ L ++ Sbjct: 66 NMSDEVIHLLFSANRWEQHTSILK-QLQDGTNIVSDRYAYSGVAF----SAAKGLPIEWC 120 Query: 121 QEISVQEVMPDCTIILDLPVD 141 + + PD T L P++ Sbjct: 121 KAPDAGLIQPDMTFYLTAPIE 141 >gi|300701613|ref|XP_002994999.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01] gi|239603498|gb|EEQ81328.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01] Length = 199 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 17/147 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR---EPGGTPAAEAARHVLLSCGVDE 61 +F+ FEG++ +GK+T + + L K D+H T+ + E LL G Sbjct: 1 MFVVFEGLDKSGKSTTCDSVYKKL--KELDIHTTQMHFPDRSSITGEILNKYLL--GKVN 56 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA ++F+A R +N I G ILLCDR+ S + + +D Sbjct: 57 LTNEATHLLFSADRYQK-KNFIEKTSRSG-ILLCDRYSWSGICFSHAKG------IDLGW 108 Query: 122 EISVQEVM--PDCTIILDLPVDIGLKR 146 + + ++ PD T L+ V++ +KR Sbjct: 109 AVETERLLPKPDITFFLEADVNVLMKR 135 >gi|94971971|ref|YP_594011.1| thymidylate kinase-like [Deinococcus geothermalis DSM 11300] gi|94554022|gb|ABF43937.1| thymidylate kinase [Deinococcus geothermalis DSM 11300] Length = 436 Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust. Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 42/229 (18%) Query: 3 SGLFISFEGIEGAGKTTHIS-----LLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLS 56 +GL ++F G +GAGK++ I+ + F + K Y H+ G G P+ EA Sbjct: 230 TGLCVAFLGPDGAGKSSVIAEVENKVAPAFRRLKRY--HLRPSFGRGHPSGEAVSDPHGK 287 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS------SYAYQGERD 110 + A+ +++ A +R L+ +++ DR+ Y Y G Sbjct: 288 APRGSGSSLAKLLLWLADYTVGSVPAVRLPLVRSTLVIFDRYYHDLLVDARRYRYGGP-- 345 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +L L +V PD I LDLP ++ R + +V + Sbjct: 346 ----AWLAGLVGRAVPR--PDLFIFLDLPAEVAHAR-----------------KPEVPLE 382 Query: 171 EKR--RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 E R R+ + +AR P+ H+VD+ VA + I+ +QKR Sbjct: 383 EGRRLRERYRQLARQLPN-AHVVDAERPLDEVAREVETIILHHLQKRTG 430 >gi|15827333|ref|NP_301596.1| thymidylate kinase [Mycobacterium leprae TN] gi|221229811|ref|YP_002503227.1| thymidylate kinase [Mycobacterium leprae Br4923] gi|13092882|emb|CAC30281.1| putative thymidylate kinase [Mycobacterium leprae] gi|219932918|emb|CAR70866.1| putative thymidylate kinase [Mycobacterium leprae Br4923] Length = 210 Score = 39.3 bits (90), Expect = 0.40, Method: Compositional matrix adjust. Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 23/204 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEA--ARHVLLS 56 + I+ EG++GAGK T L++ + V P AAEA +H L+ Sbjct: 1 MLIAIEGVDGAGKRTLSEELRQAFEATGKSVATLAFPRYRQSVAADIAAEALHGQHGDLA 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQ 113 V A A++FA R VE++ AL I++ DR++ S+ AY R + Sbjct: 61 SSV-----YAMALLFAFDRAGAVEDI--EALDRNHDIVILDRYVASNAAYSAARLHEDCS 113 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + +Q I Q + PD ++L + V++ KR + R D +ER D + Sbjct: 114 GRAVAWVQRIEYQRLRLPSPDWQVLLAVSVELAGKRSRYRARTDPDRLRDSYERDD-GLQ 172 Query: 171 EKRRQIFLDI-ARNQPDRCHIVDS 193 ++ ++ + A + R +VD+ Sbjct: 173 QRTGAVYAGLAAADWGGRWLVVDA 196 >gi|187934501|ref|YP_001884434.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B] gi|187722654|gb|ACD23875.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B] Length = 225 Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 18/164 (10%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58 M G I E G + +GK T L L + Y++ P +PA + L Sbjct: 1 MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSG-- 58 Query: 59 VDEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-- 109 EFG + E + FA R + G I++ DR+ S+ +Q + Sbjct: 59 --EFGNKPEDVNAYVASTFFAIDRFASYNKEWKDFYDNGGIIISDRYTTSNMVHQAVKMD 116 Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 + + +LD L + +PDC + LD+ +I K +++R Sbjct: 117 EEEKDKYLDWLYNLEFNLYKLPIPDCVMFLDVLPEISQKLMKDR 160 >gi|188587973|ref|YP_001919632.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43] gi|188498254|gb|ACD51390.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43] Length = 225 Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 18/164 (10%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58 M G I E G + +GK T L L + Y++ P +PA + L Sbjct: 1 MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSG-- 58 Query: 59 VDEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-- 109 EFG + E + FA R + G I++ DR+ S+ +Q + Sbjct: 59 --EFGNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMD 116 Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 + + +LD L + +PDC + LD+ +I K +++R Sbjct: 117 EEEKDKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDR 160 >gi|326469002|gb|EGD93011.1| thymidylate kinase [Trichophyton tonsurans CBS 112818] Length = 182 Score = 39.3 bits (90), Expect = 0.42, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 3/143 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ AGK+T + L +FL + ++ R P T A + L G + Sbjct: 13 GALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYLR-GEIQLD 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + IR + G ++ DR+ S Y +++ + L LD Sbjct: 72 DHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKE-LQLDWAWRP 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 V PD L++ ++ R Sbjct: 130 EVGLPRPDIWFFLNISTEVAAAR 152 >gi|134102882|ref|YP_001108543.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] gi|133915505|emb|CAM05618.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] Length = 209 Score = 39.3 bits (90), Expect = 0.43, Method: Compositional matrix adjust. Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 25/199 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKN----------YDVHVTREPGGTPAAEAARHVLLSCG 58 EG++GAGK T L L R+ YD V E AEA R G Sbjct: 2 IEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAE----LVAEALRGGHGDLG 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116 G A+++A R + +R L ++L DR++ S+ AY R +Q F Sbjct: 58 DSVHGM---AVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDF 113 Query: 117 LDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + +E+ ++ PD ++L +P ++ R +R D FE D + E+ Sbjct: 114 VAWTEELEIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFE-SDASLQERC 172 Query: 174 RQIFLDIA-RNQPDRCHIV 191 +++ +A RN +V Sbjct: 173 GEVYAQLAERNWWSPWRVV 191 >gi|149174610|ref|ZP_01853236.1| Thymidylate kinase [Planctomyces maris DSM 8797] gi|148846720|gb|EDL61057.1| Thymidylate kinase [Planctomyces maris DSM 8797] Length = 222 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 48/225 (21%), Positives = 100/225 (44%), Gaps = 20/225 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS--CGV 59 + I+ EGI+G+GK T + L Q + + P T ++ L + Sbjct: 2 AVIIAIEGIDGSGKGTQAARLHARCQAEGIKTSLIGFPRYDQTLFGKSIGDFLNGRFGEL 61 Query: 60 DEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS--QH 114 DE ++++A R + H+ N I + +++ DR++ S+ A+QG + S + Sbjct: 62 DEVNPFLASLLYAGDRFESRSHILNTIETS----DVVIFDRYIPSNVAHQGAKLSGAERS 117 Query: 115 LFLDSLQEISVQ-EVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 F++ +++I MP + I+LDLP D K + + + + + + D Sbjct: 118 EFIEWIEQIEYAIYKMPRLNLAILLDLPADYAQKLIAEKQARSYTEKVADLQEADQTYLA 177 Query: 172 KRRQIFLDIARN----QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R+++L +A Q +C ++ S + ++ I + V +L+ Sbjct: 178 NVREVYLQLAEENQHWQKIQCLQKETLRSIEEISDEIWSYVSKLI 222 >gi|171676382|ref|XP_001903144.1| hypothetical protein [Podospora anserina S mat+] gi|170936257|emb|CAP60916.1| unnamed protein product [Podospora anserina S mat+] Length = 274 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 5/136 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ +GKTT + LL++ V V R P TP + L S Sbjct: 14 GALIVLEGLDRSGKTTQVKLLEQRFVELGKSVKVMRFPDRTTPIGQMINSYLTSQ--TTM 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + ++I L G ++CDR+ S Y + + L L + Sbjct: 72 SDHVIHLLFSANRWE-AASLITSLLSHGTTVICDRYYYSGIVYSAAKHNP-FLPLSWARS 129 Query: 123 ISVQEVMPDCTIILDL 138 V PD + LDL Sbjct: 130 PEVGLPRPDLVLFLDL 145 >gi|157956089|gb|ABW06432.1| thymidylate kinase [Wheat blue dwarf phytoplasma] Length = 209 Score = 39.3 bits (90), Expect = 0.44, Method: Compositional matrix adjust. Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 38/176 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG++G+GKT+ I L+ P + + G G E Sbjct: 5 IVFEGLDGSGKTSLIQYLQ-------------------PQLKTPHQLYQGLGSSSIGKEI 45 Query: 67 EAIVFAAARLDHVENV---------IRPALM-EGKILLCDRFLDSSYAYQ---GERDSSQ 113 + ++D++ I+ L + ++++ DR+L S++AYQ ++ Q Sbjct: 46 RDLFLNFQQVDYLTRFYLSLANMAQIQAELFKKNQLIILDRWLPSNFAYQLFPFSKEKKQ 105 Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163 L + +++ + ++ PD I LD+ IG R + + + L E L YF+ Sbjct: 106 LFPLKKIFKLNHETILIKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERESLTYFQ 161 >gi|326202523|ref|ZP_08192391.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] gi|325987107|gb|EGD47935.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] Length = 230 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 17/114 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58 +G+ I FEGI G GK+ + +L+++L Y V + + LL+ G Sbjct: 11 NGMLIVFEGISGCGKSESVRVLRKYLTDNGYKTSVLEWNSNRVIRNIIKRIDSKKLLTPG 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDS 111 + F + + +D++ V+ P L + +L+ DR Y Y G RDS Sbjct: 71 IYSF------FQWVSFLIDYLFKVL-PLLKKNYVLIADR-----YIYTGLTRDS 112 >gi|251779252|ref|ZP_04822172.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083567|gb|EES49457.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 225 Score = 39.3 bits (90), Expect = 0.45, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 18/164 (10%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58 M G I E G + +GK T L L + Y++ P +PA + L Sbjct: 1 MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSG-- 58 Query: 59 VDEFGAEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-- 109 EFG + E + FA R + G I++ DR+ S+ +Q + Sbjct: 59 --EFGNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMD 116 Query: 110 DSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNR 150 + + +LD L + +PDC + LD+ +I K +++R Sbjct: 117 EEEKDKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDR 160 >gi|145348882|ref|XP_001418872.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579102|gb|ABO97165.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 218 Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 16/189 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G F+ FEG + GK+T L L+ + + + R P T + L S E Sbjct: 11 GAFVLFEGADRCGKSTQAMRLVHTLEARGVEAELWRYPDRATAMGKMIDQYLRSKSEMED 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G A ++FAA R + + ++ L G L+CDR+ S A+ + L L+ + Sbjct: 71 G--AIHLLFAANRWEK-KALMERKLASGVTLVCDRYSYSGCAFTAAK-GVDGLDLEWCRA 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V PD + L+L ++ KR + RY E +R E R+ + D Sbjct: 127 PEVGLPRPDALMYLELSLEDAAKRGGFGEERYETTE------MQRAVKASFEAMREDWWD 180 Query: 180 I--ARNQPD 186 + A +PD Sbjct: 181 VIDANREPD 189 >gi|33563101|dbj|BAA31455.1| Thimidylate Kinase [Phytoplasma sp.] Length = 209 Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 38/177 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT+ I L+ P + + G G E Sbjct: 4 LIVFEGLDGSGKTSLIHTLQ-------------------PQLKTPHQLYQGLGSSSIGKE 44 Query: 66 AEAIVFAAARLDHVENV---------IRPALME-GKILLCDRFLDSSYAYQ---GERDSS 112 + ++D++ I+ L + ++++ DR+L S+YAYQ ++ Sbjct: 45 IRDLFLNFQQVDYLTRFYLSLANMAQIQAELFKNNQLIILDRWLPSAYAYQLFPFSKEKK 104 Query: 113 QHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163 Q L + +++ + ++ PD I LD+ IG R + + + L E L YF+ Sbjct: 105 QLPPLKKIFKLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERQSLTYFQ 161 >gi|229365992|gb|ACQ57976.1| Thymidylate kinase [Anoplopoma fimbria] Length = 183 Score = 38.9 bits (89), Expect = 0.48, Method: Compositional matrix adjust. Identities = 40/143 (27%), Positives = 58/143 (40%), Gaps = 6/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGKTT L + LQ+ + R P T L D Sbjct: 6 GALIVLEGVDKAGKTTQCKKLVQALQQSGRPAEMMRFPDRTTTIGQLISAYLEKKSD-LE 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + V +R L +G L+ DR+ S A+ + Q LD + Sbjct: 65 DHTVHLLFSANRWELVPQ-MRKKLEQGITLVVDRYAFSGVAFT---SAKQGFCLDWCMKP 120 Query: 124 SVQEVMPDCTIILDL-PVDIGLK 145 V PD I L L P + L+ Sbjct: 121 DVGLPKPDLVIFLQLSPAEATLR 143 >gi|295681475|ref|YP_003610049.1| thymidylate kinase [Burkholderia sp. CCGE1002] gi|295441370|gb|ADG20538.1| thymidylate kinase [Burkholderia sp. CCGE1002] Length = 250 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 22/164 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ I+ G++GAGK++ + L+ + T TP + + + VD Sbjct: 18 GVLITLCGVDGAGKSSLMKKLESACTGAGLNCVTTF----TPTSRIRKDAVFRDMVDSHW 73 Query: 64 AEAEAIVFAAA---RLD--------------HVENVIRPALMEGKILLCDRFLDSSYAYQ 106 ++A + A A R+D H+ + + PAL G ++ CDR++ +S A Sbjct: 74 HTSKASLGADASVRRVDMLGILLSIMGDLVQHLTDTVIPALQRGDVVFCDRYVFTSQAEI 133 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 G R L L+ ++ + PD L++ +RV++R Sbjct: 134 GTRSDPAETAL-VLRSVAGHLLRPDVAFGLNVCGATSHRRVRSR 176 >gi|33563152|dbj|BAC81723.1| pseudo thymidylate kinase [Onion yellows phytoplasma] Length = 174 Score = 38.9 bits (89), Expect = 0.52, Method: Compositional matrix adjust. Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 38/177 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG++G+GKT+ I L+ P + + G G E Sbjct: 3 LIVFEGLDGSGKTSLIHALQ-------------------PLLKTPHQLYQGLGSSSLGKE 43 Query: 66 AEAIVFAAARLDHVENV---------IRPALME-GKILLCDRFLDSSYAYQ---GERDSS 112 + ++D++ I+ L + ++++ DR+L S+YAYQ ++ Sbjct: 44 IRDLFLNFQQVDYLTRFYLSLVNMAQIQAELFKNNQLIILDRWLPSTYAYQLFPFSKEKK 103 Query: 113 QHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYS----LRESACLDYFE 163 Q L + +++ + ++ PD I LD+ IG R + + + L E L YF+ Sbjct: 104 QLSPLKKIFKLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQRDLIERQSLTYFQ 160 >gi|321456428|gb|EFX67536.1| hypothetical protein DAPPUDRAFT_63855 [Daphnia pulex] Length = 195 Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust. Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 7/143 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G I E + +GK T +K +LQ N + H+ R P + A + Sbjct: 2 IKRGALIVLERCDRSGKPTQCQKVKHLWLQESNKEAHLMRFPDEIVCDQPAISSYICYAK 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + G E +F +ARL + I+ L +G ++ DR+ S A+ + ++ L Sbjct: 62 PKDGTATE--LFTSARLLSIRPDIKKLLQKGTNVIVDRYSYSGIAFSAAKP---NMDLRW 116 Query: 120 LQEISVQEVMPDCTIILDL-PVD 141 Q+ + PD I LD+ PV+ Sbjct: 117 CQQSDSGLLKPDLVIFLDIDPVE 139 >gi|296118803|ref|ZP_06837379.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306] gi|295968292|gb|EFG81541.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306] Length = 204 Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust. Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 9/165 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS-CGVDE 61 + I+ EGI+GAGK T +S L++ L N V V P + A+ A+ L G Sbjct: 1 MIIAIEGIDGAGKNTLVSQLRKEL---NIPVEVLAFPRYEDSIHAQLAQEALYGRMGDLT 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 A A A +FA R + + A +L+ DR++ S+ AY R D + ++ Sbjct: 58 SSAYAMATLFALDR-HGAKQQLEEASTSSNLLILDRYVASNAAYSAARLGDDAVMDWVFD 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 L+ + PD I L V I +R +R + S D +E+ Sbjct: 117 LEFGRLGLPKPDLQIYLATEVGIAAQRASSREAQDASREKDQYEK 161 >gi|257464026|ref|ZP_05628411.1| thymidylate kinase [Fusobacterium sp. D12] Length = 222 Score = 38.9 bits (89), Expect = 0.54, Method: Compositional matrix adjust. Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 18/151 (11%) Query: 4 GLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG + +GK T LL ++FL + ++ +PA E + L EF Sbjct: 2 GKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYL----AGEF 57 Query: 63 GAEAEAI----VFAAARLDHVENVIRPA----LMEGKILLCDRFLDSSYAYQ-----GER 109 G +AE + V A +D + + E + + DR++ S+ +Q GE Sbjct: 58 GLDAEKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQGEE 117 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPV 140 +L++L+ Q PD I LD+P Sbjct: 118 KEHYLSWLETLEYEQFQIPRPDFVIFLDMPT 148 >gi|29841447|gb|AAP06479.1| SJCHGC06009 protein [Schistosoma japonicum] Length = 238 Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G+F+ EG + GKTT SLL + L Q+K V TP L G Sbjct: 8 GIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRD--TPLGHQLDAYLGGNG- 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 + + A ++F A R + ++ IR A+ G ++ DR++ S AY + Sbjct: 65 -DINSHALHLLFTANRWEK-QSEIRNAISNGISVVADRYIYSGIAYTAAK 112 >gi|118463240|ref|YP_883352.1| thymidylate kinase [Mycobacterium avium 104] gi|254776646|ref|ZP_05218162.1| thymidylate kinase [Mycobacterium avium subsp. avium ATCC 25291] gi|118164527|gb|ABK65424.1| thymidylate kinase [Mycobacterium avium 104] Length = 210 Score = 38.9 bits (89), Expect = 0.55, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 25/178 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEA--ARHVLLS 56 + I+ EG++GAGK T L++ + V R AAEA H L+ Sbjct: 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60 Query: 57 CGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109 V A A++FA AA + +E + R + +++ DR++ S+ AY R Sbjct: 61 SSV-----YAMAMLFALDRAAAVGDIEGLRR----DHDVVIMDRYVASNAAYTAARLHQD 111 Query: 110 -DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 D ++ +L+ ++ PD ++L + ++ +R ++R D +ER D Sbjct: 112 ADGPAVAWVHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYERDD 169 >gi|194880945|ref|XP_001974613.1| GG20995 [Drosophila erecta] gi|190657800|gb|EDV55013.1| GG20995 [Drosophila erecta] Length = 211 Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust. Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 16/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + +GK+T LL L K P + + L+ D Sbjct: 7 GALIIFEGCDRSGKSTQSQLLVALLNSKGIPALPMNFPERSSIIGQVINSYLTNSKD-LP 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++F+ R +H+ N I+ L EG+ ++ DR+ S AY +++ L D Sbjct: 66 DEVIHLMFSTNRWEHM-NYIKQNLHEGRTVVVDRYSFSGVAY----SAAKGLDFDWCYAP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD L P + NR E + +E+ V + ++F I Sbjct: 121 ERGLIKPDAVFYLRAPP----ADLTNRTQYGE----ERYEK--VEFQGRVAKVFDRICSE 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q H D+ + + I +I EL+ K Sbjct: 171 QGSYWHQFDATKPVEDLHAQIASITEELLPK 201 >gi|145503822|ref|XP_001437883.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405044|emb|CAK70486.1| unnamed protein product [Paramecium tetraurelia] Length = 205 Score = 38.9 bits (89), Expect = 0.56, Method: Compositional matrix adjust. Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 17/140 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVD 60 GLFI EG++ GK+T LL L K P + +++S G Sbjct: 7 GLFIVLEGLDKCGKSTQTELLSEALDAKKMQF---------PDRSTSMGLIISDYLKGKR 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + +N I L +G ++CDR+ S A+ S++ L + Sbjct: 58 DINDQVIHLLFSANRWE-AQNTIIETLNKGINIVCDRYAYSGVAF----SSAKGLPIQWC 112 Query: 121 QEISVQEVMPDCTIILDLPV 140 ++ PD I L P+ Sbjct: 113 KQCDSGLPKPDLVIYLRAPI 132 >gi|41409459|ref|NP_962295.1| thymidylate kinase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398290|gb|AAS05911.1| Tmk [Mycobacterium avium subsp. paratuberculosis K-10] Length = 210 Score = 38.9 bits (89), Expect = 0.58, Method: Compositional matrix adjust. Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 25/178 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEA--ARHVLLS 56 + I+ EG++GAGK T L++ + V R AAEA H L+ Sbjct: 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60 Query: 57 CGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---- 109 V A A++FA AA + +E + R + +++ DR++ S+ AY R Sbjct: 61 SSV-----YAMAMLFALDRAAAVGDIEGLRR----DHDVVIMDRYVASNAAYTAARLHQD 111 Query: 110 -DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 D ++ +L+ ++ PD ++L + ++ +R ++R D +ER D Sbjct: 112 ADGPAVAWVHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYERDD 169 >gi|226468432|emb|CAX69893.1| deoxythymidylate kinase (thymidylate kinase) [Schistosoma japonicum] Length = 238 Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G+F+ EG + GKTT SLL + L Q+K V TP L G Sbjct: 8 GIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRD--TPLGHQLDAYLGGNG- 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 + + A ++F A R + ++ IR A+ G ++ DR++ S AY + Sbjct: 65 -DINSHALHLLFTANRWEK-QSEIRNAISNGISVVADRYIYSGIAYTAAK 112 >gi|131840166|ref|YP_001096175.1| ORF140 [Cyprinid herpesvirus 3] gi|71068047|gb|AAZ23013.1| thymidylate kinase [Cyprinid herpesvirus 3] gi|84181500|gb|ABC55103.1| hypothetical protein [Cyprinid herpesvirus 3] gi|109706741|gb|ABG42967.1| ORF140 [Cyprinid herpesvirus 3] gi|129560659|dbj|BAF48954.1| deoxythymidylate kinase [Cyprinid herpesvirus 3] Length = 233 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 24/206 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T +L + L + + R P TP + LL+ + Sbjct: 21 GALIILEGVDRSGKSTQCRMLVKALLEMGVEAELMRFPDRTTPIGQMINSYLLNKS--DL 78 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + ++ R LM+G ++ DR+ S A+ + + L+ + Sbjct: 79 DDHVVHLLFSANRWEAASDLKR-KLMKGTTIVLDRYAFSGVAFTAAKPGFE---LEWCKR 134 Query: 123 ISVQEVMPDCTIILDLPVDI-----GLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQ 175 V PD + L + G + S ++A + FE KDV ++ ++ Sbjct: 135 TDVGLPKPDLVVFLAIEASAVESRGGFGDERYEVSAFQAAVRENFEVLMKDVTVNWRK-- 192 Query: 176 IFLDIARNQPDRCH-----IVDSAHS 196 +D AR P++ H + D AH+ Sbjct: 193 --VDAART-PEQVHGDILRLTDDAHN 215 >gi|313896786|ref|ZP_07830334.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974703|gb|EFR40170.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430] Length = 229 Score = 38.5 bits (88), Expect = 0.63, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 10/148 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LS 56 M G E +G+GK T LL L+R + + +T ++ R L Sbjct: 1 MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQ 113 D+ A A + FA R G ++L DR+ S+ +Q + D+ + Sbjct: 61 THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDL 138 FLD L ++ +++ +PD LD+ Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDM 148 >gi|320530090|ref|ZP_08031160.1| dTMP kinase [Selenomonas artemidis F0399] gi|320137523|gb|EFW29435.1| dTMP kinase [Selenomonas artemidis F0399] Length = 229 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 10/148 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVL---LS 56 M G E +G+GK T LL L+R + + +T ++ R L Sbjct: 1 MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQ 113 D+ A A + FA R G ++L DR+ S+ +Q + D+ + Sbjct: 61 THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDL 138 FLD L ++ +++ +PD LD+ Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDM 148 >gi|326480672|gb|EGE04682.1| thymidylate kinase [Trichophyton equinum CBS 127.97] Length = 235 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 3/143 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ AGK+T + L +FL + ++ R P T A + L G + Sbjct: 13 GALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYLR-GEIQLD 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + IR + G ++ DR+ S Y +++ + L LD Sbjct: 72 DHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKE-LQLDWAWRP 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 V PD L++ ++ R Sbjct: 130 EVGLPRPDIWFFLNISTEVAAAR 152 >gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM 3638] gi|23822176|sp|Q8U070|SRP54_PYRFU RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling The Ribonucleic Core Of The Signal Recognition Particle From The Archaeon Pyrococcus Furiosus. gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling The Ribonucleic Core Of The Signal Recognition Particle From The Archaeon Pyrococcus Furiosus. gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM 3638] Length = 443 Score = 38.5 bits (88), Expect = 0.64, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 9/77 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64 GI+G+GKTT ++ L R+ Q++ Y V V T PG A R +L ++ FG Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG---AYHQLRQLLDRYHIEVFGNPQ 163 Query: 65 EAEAIVFAAARLDHVEN 81 E +AI A +D+ ++ Sbjct: 164 EKDAIKLAKEGVDYFKS 180 >gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739] gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739] Length = 453 Score = 38.5 bits (88), Expect = 0.70, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 9/74 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64 GI+G+GKTT ++ L R+ Q+ Y V V T PG A + + ++ G++ FG Sbjct: 112 GIQGSGKTTSVAKLSRYFQKHGYKVGVVCSDTWRPG---AYQQLKQLIEPYGIEVFGNPE 168 Query: 65 EAEAIVFAAARLDH 78 E AI A +++ Sbjct: 169 EKNAIKLAKEGVEY 182 >gi|207723641|ref|YP_002254039.1| hypothetical protein RSMK01034 [Ralstonia solanacearum MolK2] gi|206588844|emb|CAQ35806.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 216 Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 9/163 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGA 64 I+FEGI+G+GKTT +LL L P EA + G D FG Sbjct: 11 LITFEGIDGSGKTTAATLLVERLAAHGVKTIFHPNRSLAPVREALDALAQEDGYSDRFGL 70 Query: 65 -EAEAIVFAAARLDHVENV-IRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A + F AA + E + +RP L E ++++ DR+ + + ++ L L Sbjct: 71 FGAGNMQFLAAVMKWRELLDLRPLLEREDQVVVLDRYFYTHLSLATTHATTNSAHLRRLF 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 +I PD T+ +D+ + +RV R R+ +DY R Sbjct: 131 KIFPT---PDITLFMDIDPKLAGERVLKRG--RDVNAVDYLAR 168 >gi|262203512|ref|YP_003274720.1| thymidylate kinase [Gordonia bronchialis DSM 43247] gi|262086859|gb|ACY22827.1| thymidylate kinase [Gordonia bronchialis DSM 43247] Length = 211 Score = 38.5 bits (88), Expect = 0.74, Method: Compositional matrix adjust. Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 9/175 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G I+ EG++GAGK T ++ L R+ V P G + A+ A L D Sbjct: 2 GELIAVEGLDGAGKNTLVTGLVDEWTRRGARVATFTFPRYGRSLTADIASEALHGNHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115 A A++FA R V + A ++L DR++ S+ AY R D Sbjct: 62 RESVYAMALLFALDRSAAVAEIAAAAEAADVVIL-DRYVASNAAYSAARLHQDADGEVVR 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++ L+ + PD I+L +P + + R ++R S S D++ER + H Sbjct: 121 WVADLEFGRLGLPAPDRQILLGVPAETAMARAESRASADASRARDHYERDSDLQH 175 >gi|5650772|gb|AAD45944.1|AF089813_7 putative thymidylate kinase [Synechococcus sp. PCC 7002] Length = 101 Score = 38.5 bits (88), Expect = 0.75, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 4/82 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEF 62 FI FEGI+G+G +T LL + QR+ ++ EP R L L D Sbjct: 9 FIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDPV 68 Query: 63 GAEAE-AIVFAAARLDHVENVI 83 + A +FA R DH+ N I Sbjct: 69 QLNRQLAYLFAGDRHDHLYNEI 90 >gi|308805831|ref|XP_003080227.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri] gi|116058687|emb|CAL54394.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri] Length = 1006 Score = 38.5 bits (88), Expect = 0.76, Method: Compositional matrix adjust. Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 12/180 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + FEG + GK+T L + L+++ + R P T L D Sbjct: 359 GALVLFEGADRCGKSTQARRLVKTLEQRGVRAELWRYPDRTTKTGEMIDAYLRSESDTAD 418 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A A ++FAA R + + ++ L +G L+CDR+ S A+ + + L L + Sbjct: 419 A-AIHLLFAANRWEK-KALMERKLADGVTLVCDRYSYSGCAFTAAK-GVEGLDLTWCKAP 475 Query: 124 SVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V PD + L+L ++ +R + RY E +R + E R+ + D+ Sbjct: 476 EVGLPRPDALMYLELSLEDAARRGGFGEERYETTE------MQRAVKEMFESMREPWWDV 529 >gi|196234357|ref|ZP_03133185.1| thymidylate kinase [Chthoniobacter flavus Ellin428] gi|196221549|gb|EDY16091.1| thymidylate kinase [Chthoniobacter flavus Ellin428] Length = 253 Score = 38.1 bits (87), Expect = 0.89, Method: Compositional matrix adjust. Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 38/174 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---------VTREPGGTPAAEAARHV 53 +G + EG +G+G++T I +L ++L+ Y V V+ E H Sbjct: 22 AGKLFAIEGADGSGRSTQIGMLSQWLEANGYAVRHMGLRRSNLVSEELEEAKQGNVLTHT 81 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GER 109 LS + +A D + + I PAL G I++ DR++ + A +R Sbjct: 82 TLS------------LFYATDFFDQLVHEIVPALRAGLIVIADRYIYTLMARDLVRGADR 129 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 +++L+ +L +PD +G ++ R + ++++ LDY+E Sbjct: 130 AWTRNLYSPAL--------VPDAVFYF----RVGAAQLVER-NFQKNSTLDYWE 170 >gi|289614663|emb|CBI58566.1| unnamed protein product [Sordaria macrospora] Length = 279 Score = 38.1 bits (87), Expect = 0.93, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 7/137 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ +GKTT + LL+ +++ V R P TP + L S + Sbjct: 27 GALIVVEGLDRSGKTTQVKLLEERFRKEGKRVKTMRFPDRTTPIGQMIDSYLKSQA--QM 84 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQ 121 ++F+A R + V+ I L G L+ DR+ S Y +++ S L Sbjct: 85 EDHVIHLLFSANRWEAVKT-ITTELSLGTTLILDRYYYSGIVYSAAKQNPSLSLSWARAP 143 Query: 122 EISVQEVMPDCTIILDL 138 EI + PD + LDL Sbjct: 144 EIGLPR--PDLVLFLDL 158 >gi|313680444|ref|YP_004058183.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977] gi|313153159|gb|ADR37010.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977] Length = 199 Score = 38.1 bits (87), Expect = 0.98, Method: Compositional matrix adjust. Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 13/148 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG G GKTT L + L+ + V P E H V Sbjct: 1 MYIAIEGPIGVGKTTLTRHLAQALEGEALFEVVEENPFLPLFYEDPEHYAFKVQV----- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQE 122 F +R +E++ +P L E + ++ D D + + L+ + Q Sbjct: 56 -----FFLLSRYKQLEHLAQPRLFE-RAVVADYLFDKDFIFASLNLEGHEWELYQELYQS 109 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR 150 +S + PD TI L P+++ L+R++ R Sbjct: 110 LSPRIPTPDLTIYLRAPLEVLLERIRRR 137 >gi|209965955|ref|YP_002298870.1| thymidylate kinase [Rhodospirillum centenum SW] gi|209959421|gb|ACJ00058.1| thymidylate kinase, putative [Rhodospirillum centenum SW] Length = 220 Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 20/149 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EGI+GAGK T + L + T P G T AA + LL+ G +E Sbjct: 1 MLIAIEGIDGAGKRTLTDAVATLLAERGLTCSATSFPQYGRTRAARGVQD-LLNLGPEEL 59 Query: 63 GA--EAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQ-- 113 EA + A LD E+ L+ G ++L DR++ S+ AYQ R + Sbjct: 60 ARIDPREAAAWYA--LDRFESR---GLLAGLRAGHDVVLIDRWIASNIAYQRARAPAAEG 114 Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLP 139 ++ SL+ +PD T+++ P Sbjct: 115 PGLEAWILSLETGLYGLPVPDATVLVATP 143 >gi|254822994|ref|ZP_05227995.1| thymidylate kinase [Mycobacterium intracellulare ATCC 13950] Length = 210 Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust. Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 33/182 (18%) Query: 5 LFISFEGIEGAGKTTHI-SLLKRF---------LQRKNYDVHVTREPGGTPAAEA--ARH 52 + I+ EG++GAGK T LL F L Y VT + AAEA H Sbjct: 1 MLIAIEGVDGAGKRTLTEGLLSAFEAAGRSVATLAFPRYGQSVTADI----AAEALHGEH 56 Query: 53 VLLSCGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 L+ V A A +FA AA ++ +E + R + +++ DR++ S+ AY R Sbjct: 57 GDLASSV-----YAMATLFALDRAAAVEQLEGLRR----DHDVVIMDRYVASNAAYTAAR 107 Query: 110 -----DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 ++ L+ + PD ++L +P ++ +R ++R + D +ER Sbjct: 108 LHQDAGGPAVAWVHGLEYQRLGLPAPDWQVLLAVPAELAGQRARSRAASDPGRARDSYER 167 Query: 165 KD 166 D Sbjct: 168 DD 169 >gi|118618060|ref|YP_906392.1| thymidylate kinase [Mycobacterium ulcerans Agy99] gi|118570170|gb|ABL04921.1| thymidylate kinase Tmk [Mycobacterium ulcerans Agy99] Length = 222 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 47/214 (21%), Positives = 96/214 (44%), Gaps = 17/214 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T L++ + V P G + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60 Query: 63 GAE-AEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH- 114 + A A +FA AA +D + + + ++++ DR++ S+ AY R DS+ Sbjct: 61 SSVFAMATLFALDRAAAVDEIHGLC----LAYEVVILDRYVASNAAYSAARLHQDSAGEA 116 Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++ ++ PD ++L +PV++ +R + R D +ER D + ++ Sbjct: 117 VAWVGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYERDD-GLQQRT 175 Query: 174 RQIFLDI-ARNQPDRCHIVDSAHSFQSVATNILN 206 ++ ++ A R +VD+ ++A +++ Sbjct: 176 GSVYAELAAAGWGGRWLVVDADVDPGALAATLMS 209 >gi|255513966|gb|EET90230.1| Thymidylate kinase-like protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 240 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 18/128 (14%) Query: 91 KILLCDRFLDSSY-------AYQGERDSSQHL--FLDSLQEISVQEVMPDCTIILDLPVD 141 K+++ DR++D++ A GE + + + + PD TI++D P++ Sbjct: 107 KVIIFDRYIDTALTHAVARAALAGEHEDGPAIKSLFGTFFALKEHIEWPDLTIVIDTPIE 166 Query: 142 IGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + + R RE+ +RK I E R+ +A +PDR H +D S + + Sbjct: 167 V----AEGRAMKRENHGYSETDRKGFKTISEAYRK----LASYEPDRVHFIDGRKSPEEI 218 Query: 201 ATNILNIV 208 + I +++ Sbjct: 219 LSEIKDLI 226 >gi|183981320|ref|YP_001849611.1| thymidylate kinase Tmk [Mycobacterium marinum M] gi|183174646|gb|ACC39756.1| thymidylate kinase Tmk [Mycobacterium marinum M] Length = 217 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 50/215 (23%), Positives = 95/215 (44%), Gaps = 19/215 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T L++ + V P G + A+ A L E Sbjct: 1 MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHG----EH 56 Query: 63 GAEAEAIVFAAAR---LDHVENV--IRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114 G A + VFA A LD V I + ++++ DR++ S+ AY R DS+ Sbjct: 57 GDLASS-VFAMATLFALDRAAAVDEIHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGE 115 Query: 115 --LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 ++ ++ PD ++L +PV++ +R + R D +ER D + ++ Sbjct: 116 AVAWVGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYERDD-GLQQR 174 Query: 173 RRQIFLDI-ARNQPDRCHIVDSAHSFQSVATNILN 206 ++ ++ A R +VD+ ++A +++ Sbjct: 175 TGSVYAELAAAGWGGRWLVVDADVDPGALAATLMS 209 >gi|159109111|ref|XP_001704822.1| CDC8 [Giardia lamblia ATCC 50803] gi|157432895|gb|EDO77148.1| CDC8 [Giardia lamblia ATCC 50803] Length = 254 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 6/138 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + GLF+ EG++ AGK T I + L++ V V P T + A L +D Sbjct: 29 VTRGLFVVIEGLDRAGKDTMIGQVVALLRQAGESVVVQAFPDRTTKSGAVLDRFLQRELD 88 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + +A R +E V+ L+ G ++C R+ S AY + +++ Sbjct: 89 LSDWDCHRL-YAENR-KELEEVLCNTLLAGTTVICSRYAYSGVAYTAAKGHDMRRCMEAD 146 Query: 121 QEISVQEVMPDCTIILDL 138 + + + PD I LD+ Sbjct: 147 KGL----LRPDLVIFLDV 160 >gi|116200466|ref|XP_001226045.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51] gi|88175492|gb|EAQ82960.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51] Length = 317 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 3/135 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ +GKTT + LL++ V V R P T L V E Sbjct: 65 GALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLKSQV-EMD 123 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + + + L + +LCDR+ S Y + + L L + Sbjct: 124 DHVIHLLFSANRWEAAKTITH-LLTQSTTVLCDRYYHSGIVYSSAKQNPS-LTLPWARGP 181 Query: 124 SVQEVMPDCTIILDL 138 + PD + LDL Sbjct: 182 EIGLPRPDLVLFLDL 196 >gi|167769946|ref|ZP_02441999.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM 17241] gi|167667937|gb|EDS12067.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM 17241] Length = 221 Score = 37.7 bits (86), Expect = 1.1, Method: Compositional matrix adjust. Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 8/157 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVD 60 G I +G++GAGK T +LL R P T P++ + L D Sbjct: 3 GRLIVIDGLDGAGKQTQAALLLDRFARAGVPARGISFPDYTHPSSALVKQYLAGEFGQAD 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQH-LFLD 118 + A A + +A R + + G ++ DR+ S+ +Q G+ Q F+D Sbjct: 63 DVPAYAASSFYAVDRFASYVGYWKDDYLAGHTIIADRYATSNLIHQMGKLPRGQWDAFID 122 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYS 152 + +++ PD + LD+ D+ + + RY Sbjct: 123 WSADFEYEKLGLPKPDAVLFLDMHPDVSERLLMKRYG 159 >gi|76664708|emb|CAJ17794.1| thymidylate kinase [Candidatus Phytoplasma solani] Length = 68 Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 30/51 (58%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 I FEG++G+GKT+ I +KR L+ + +V V R G + E+ R L+ Sbjct: 3 LIIFEGLDGSGKTSLIKSVKRELKEQGKEVIVIRGLGSSTIGESIRETFLT 53 >gi|224055681|ref|XP_002298600.1| predicted protein [Populus trichocarpa] gi|222845858|gb|EEE83405.1| predicted protein [Populus trichocarpa] Length = 222 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 6/143 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ +GKT+ S L +L+ + + R P + + LS Sbjct: 18 GALIVLEGLDRSGKTSQSSRLLSYLEGLGHSTELWRFPDRSTSVGQMISAYLS-NKSHLD 76 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + +++ L G L+ DR+ S A+ S++ L ++ + Sbjct: 77 DRTIHLLFSANRWEK-RSLMETQLKNGTTLVVDRYSYSGVAFS----SAKGLDIEWCKAP 131 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 V + PD + LD+P + +R Sbjct: 132 EVGLLAPDIVLYLDIPPEKAAER 154 >gi|325119339|emb|CBZ54892.1| Thymidylate kinase, related [Neospora caninum Liverpool] Length = 271 Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust. Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 8/109 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEF 62 G + FEGI+ +GK+T L L ++ + R P T + + L S Sbjct: 9 GCLVVFEGIDRSGKSTQARLAYERLLKEGQPTELIRFPDRTTSIGQVLDKFLASATWSNE 68 Query: 63 G------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 G + ++FAA R + ++R AL EGK +L DR+ S AY Sbjct: 69 GPCQIPPPQLTHLLFAANRWEAQARILR-ALGEGKTVLVDRYSFSGIAY 116 >gi|121720030|ref|XP_001276713.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1] gi|119404925|gb|EAW15287.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1] Length = 1288 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 4/43 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43 + SG F++F G G GK+T ISLL+RF + H T E GG Sbjct: 1059 IQSGQFVAFVGPSGCGKSTLISLLERFYE----PTHGTVEVGG 1097 >gi|85091013|ref|XP_958694.1| thymidylate kinase [Neurospora crassa OR74A] gi|12718338|emb|CAC28573.1| related to thymidylate kinase [Neurospora crassa] gi|28920075|gb|EAA29458.1| thymidylate kinase [Neurospora crassa OR74A] Length = 309 Score = 37.4 bits (85), Expect = 1.5, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 9/138 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GKTT + LL+ RFL + V R P TP + L S + Sbjct: 24 GALIVIEGLDRSGKTTQVKLLEDRFL-KAGKKVKTMRFPDRTTPIGQMIDSYLKSQA--Q 80 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSL 120 ++F+A R + V+ I L +G L+ DR+ S Y +++ S L Sbjct: 81 MDDHVIHLLFSANRWEAVKK-ITSELSQGTTLILDRYYHSGIVYSAAKQNPSLSLSWARA 139 Query: 121 QEISVQEVMPDCTIILDL 138 EI + PD + LDL Sbjct: 140 PEIGLPR--PDLVLFLDL 155 >gi|196015603|ref|XP_002117658.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens] gi|190579827|gb|EDV19916.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens] Length = 211 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 71/175 (40%), Gaps = 16/175 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G I EG + GK+T +L L + + P TP + A L Sbjct: 6 NRGALIIIEGGDRTGKSTQSKMLVDALLADGKQAELVKFPDRTTPIGKLAGSYLQKT--- 62 Query: 61 EFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-L 117 E AI +F+A R + V ++I L G L+ DR+ S AY S++ F + Sbjct: 63 -LDLEDHAIHLIFSANRWEKVPSIIE-RLENGITLVVDRYAFSGVAYT----SAKRGFDI 116 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ PD I L LPVD R Q ES F+++ V EK Sbjct: 117 EWCKQSDTGIPAPDLVIYLTLPVDQATSRDQYGTERYEST---QFQKRAVENFEK 168 >gi|225077170|ref|ZP_03720369.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens NRL30031/H210] gi|224951518|gb|EEG32727.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens NRL30031/H210] Length = 211 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 15/149 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G+GKT L R L + ++ P P + V G Sbjct: 5 YIVVEGAIGSGKTA----LSRRLAEHFSALLLSENPDHNPFL-----MKFYSNVSNNGLA 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 AE + F R + V N+I +G +++ D FL D + D Q LF D Q Sbjct: 56 AE-LFFLTRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFADMKQR 112 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 I Q V PD I L V+ KR+Q R+ Sbjct: 113 ILPQYVEPDVVIYLQTAVENNRKRLQKRH 141 >gi|300779615|ref|ZP_07089471.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030] gi|300533725|gb|EFK54784.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030] Length = 208 Score = 37.4 bits (85), Expect = 1.6, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV--DE 61 + ++ EGI+GAGK T + L R L + D T P + H L+ + Sbjct: 1 MIVALEGIDGAGKNTLVQKLIRELGATDRIDSAATM---AFPRYNESLHAQLAADALHGK 57 Query: 62 FG-----AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--SQH 114 G A A++FA R V + + A +LL DR++ S+ AY R Sbjct: 58 MGDLTDSAHGMAVMFALDRYGVVGELWQWASSPSDVLLLDRYVASNAAYTSARTGRIDDR 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 ++ L+ + P +++D D R ++R S D +ER Sbjct: 118 AWVAGLEFDRLGLPRPALQVLVDTAPDTARARARSREQADASRARDRYER 167 >gi|259480991|tpe|CBF74121.1| TPA: thymidylate and uridylate kinase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 223 Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust. Identities = 56/225 (24%), Positives = 87/225 (38%), Gaps = 16/225 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ AGK++ L LQ V R P TP + L G Sbjct: 11 GALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPDRTTPIGKLIDGYLR--GQSHL 68 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++F+A R + V I + G ++ DR+ S Y + ++ L L+ + Sbjct: 69 DDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEWAWQ 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V PD + L + + KR E+ E + E IF D+ R Sbjct: 127 PEVGLPKPDLCLFLSISPEEAAKRGGFGGERYEN------EAMQTRVRELFNTIF-DLQR 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSSKKDI 225 R I+D+ S V+ +ILN+V E + SPL I Sbjct: 180 ATDIR--IIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 222 >gi|315049351|ref|XP_003174050.1| thymidylate kinase [Arthroderma gypseum CBS 118893] gi|311342017|gb|EFR01220.1| thymidylate kinase [Arthroderma gypseum CBS 118893] Length = 237 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 45/219 (20%), Positives = 94/219 (42%), Gaps = 16/219 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ AGK+T + L +FL + + R P T + + L + + Sbjct: 15 GALVVVEGLDRAGKSTQCTRLHQFLVDQGHKAKYIRFPDRTTSIGKMINQYLRAEI-QLD 73 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + IR + G ++ DR+ S Y ++ ++ L LD Sbjct: 74 DHAVHLLFSANRWEAAAQ-IRQDIEAGITVIVDRYSYSGAVYSAAKE-NKELQLDWAWRP 131 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V PD L++ ++ + R + +E V + ++ ++FL ++ Sbjct: 132 EVGLPRPDIWFFLNISTEVA--------AARGGYGTERYE--TVNLQQRVGKLFLSLSGL 181 Query: 184 QPDR-CHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219 + + IVD+ ++++I + V + + K + PL Sbjct: 182 KGNEDMRIVDAGREMDEISSDIRDEVLQTMTKIDSIGPL 220 >gi|320100638|ref|YP_004176230.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM 2162] gi|319752990|gb|ADV64748.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM 2162] Length = 221 Score = 37.0 bits (84), Expect = 1.8, Method: Compositional matrix adjust. Identities = 18/35 (51%), Positives = 22/35 (62%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 G I F G+EGAGKTTHI LL L+++ V T Sbjct: 2 GRVIVFAGLEGAGKTTHIRLLAIRLKKRGLRVRTT 36 >gi|291296955|ref|YP_003508353.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279] gi|290471914|gb|ADD29333.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279] Length = 206 Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG+ G GKTT LL L ++ + V E P L +G Sbjct: 1 MYIAIEGVIGVGKTTLARLLAERLGAESL-LEVVEENPFLP--------LFYQDPVRYGF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + + F +R + + +P+L G ++ L D+ D+ +A + L+ D + Sbjct: 52 KVQ-VFFLLSRYKQLLPLAQPSLFTGGVVADYLFDK--DAIFAAMNLSGAEWDLYNDLYR 108 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNR 150 ++ + PD TI L P+ + L+R++ R Sbjct: 109 SLAPKIPTPDLTIYLRAPLPVILERIRRR 137 >gi|170097605|ref|XP_001880022.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645425|gb|EDR09673.1| predicted protein [Laccaria bicolor S238N-H82] Length = 228 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 25/224 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG++ +GKTT SLL L+ + + + P T L E Sbjct: 5 FIVIEGLDRSGKTTQTSLLHTRLEAEGIQAKLMKFPDRTTVIGQMIDSYLRSD-SELDDH 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLFLDSL 120 ++F+A R + + + I L G ++CDR+ S A+ + S L + Sbjct: 64 VIHLLFSANRWE-LASYITQLLEAGTPIICDRYAFSGIAFSASKGIPSSTPSPKLPYEWC 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD + LD+ R LR + +E+++ + + R IF + Sbjct: 123 RSPDIGLPAPDLVLFLDI--------APERAKLRGGYGEERYEKEE--LQARVRGIFQRL 172 Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 +P R + VD+ + VA + ++V LV R+ Sbjct: 173 GSEMQNETQRPVRPNWVTVDAGRERKVVANEVWSLVEPLVINRI 216 >gi|159467729|ref|XP_001692044.1| hypothetical protein CHLREDRAFT_94429 [Chlamydomonas reinhardtii] gi|158278771|gb|EDP04534.1| predicted protein [Chlamydomonas reinhardtii] Length = 167 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 16/109 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEGI+ GK+T SLL LQ++ + R P R L+ ++E+ Sbjct: 50 GALIVFEGIDRCGKSTQCSLLLESLQKQGVPAELWRFP--------DRTTLIGGLINEYL 101 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + ++ +F A R + + ++R L G L+ DR+ S AY Sbjct: 102 QKKASLNDAAVHMLFVANRHEKRDEMLR-LLAGGTTLVLDRYSYSGVAY 149 >gi|302685604|ref|XP_003032482.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8] gi|300106176|gb|EFI97579.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8] Length = 221 Score = 37.0 bits (84), Expect = 2.0, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++ +GK+T + LK L V + + P T A L + E Sbjct: 5 GAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNI-EMD 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 ++++A R + + + I L EG ++CDR+ S A+ + Sbjct: 64 DHVVHLLYSANRWE-LASRISTLLTEGTTIICDRYAFSGIAFSASK 108 >gi|227550018|ref|ZP_03980067.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291] gi|227077927|gb|EEI15890.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291] Length = 201 Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust. Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 15/171 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGK T ++ +K L + + A A H + VD A Sbjct: 1 MIIAVEGIDGAGKNTLVNAIKGELGAETVAFPRYADSIYAQLAREALHGRMGDLVDS--A 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122 A +FA R + A KI++ DR++ S+ AY R D + ++ L+ Sbjct: 59 HGMATLFALDRAGAKPLLDTFATAPDKIIILDRYVASNAAYTAARTGDDAAARWVFELEF 118 Query: 123 ISVQEVMPDCTIILDL-PVDIGLK----------RVQNRYSLRESACLDYF 162 + + PD +++D P + G + RV++RY S D F Sbjct: 119 VRLGLPRPDLQVLVDTDPAEAGQRARRREEGDAERVRDRYESDASLQQDTF 169 >gi|9971893|gb|AAG10455.1|AF279106_17 predicted deoxypurine kinase [uncultured marine gamma proteobacterium EBAC31A08] Length = 221 Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust. Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 18/179 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GKTT L + + NYD + +P P + + Sbjct: 13 YIAIEGPIGVGKTT---LANKIAETFNYDSFL-EQPAENPFLKNFYKNPSQSAL------ 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123 A + F R+ ++++ + +L E + + D + D +A + L+ + Sbjct: 63 ATQLFFLFQRMQQIQDLKQRSLFET-VRVADFLIEKDRLFAEVTLSNEEMDLYDKVYDHL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD I L P+D+ R+ R ++ E LDY ER +++ + FLD + Sbjct: 122 TLDAPTPDLVIYLQAPIDVLKDRITKRGNINEQYLTLDYLER----LNDAYSRFFLDYS 176 >gi|237749054|ref|ZP_04579534.1| signal recognition particle [Oxalobacter formigenes OXCC13] gi|229380416|gb|EEO30507.1| signal recognition particle [Oxalobacter formigenes OXCC13] Length = 454 Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFG 63 I G++G GKTT + L R+L Q K V PAA + V GVD +G Sbjct: 106 IILMAGLQGVGKTTTVGKLARYLKQEKKKKVLTVSTDVYRPAAIKQLETVSGQSGVDFYG 165 Query: 64 AEA-EAIVFAAARLDHVE 80 ++A E I A A LDH + Sbjct: 166 SDASEPIQIAKAALDHAK 183 >gi|209882114|ref|XP_002142494.1| thymidylate kinase family protein [Cryptosporidium muris RN66] gi|209558100|gb|EEA08145.1| thymidylate kinase family protein [Cryptosporidium muris RN66] Length = 208 Score = 37.0 bits (84), Expect = 2.2, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 M G I FEG + +GKT + L + +N + + P T L +C Sbjct: 1 MRRGALIVFEGTDRSGKTLQSNKLAEKFKNENINCILIGFPDRSTNIGYLLDLYLRNC-- 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + E ++F+A R ++ E I+ L G ++CDR+ S AY Sbjct: 59 ENMRPEVSHLLFSANRWEYFEK-IKTYLESGVTVICDRYAFSGVAY 103 >gi|119719417|ref|YP_919912.1| GTP-binding signal recognition particle [Thermofilum pendens Hrk 5] gi|119524537|gb|ABL77909.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermofilum pendens Hrk 5] Length = 431 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEF 62 + F G+EG+GKTT ++ + + +RK Y V V T PG A E R + GV + Sbjct: 102 VMFVGLEGSGKTTTVAKVANYYKRKGYRVGVVAADTYRPG---AYEQLRSLAEKVGVPFY 158 Query: 63 G 63 G Sbjct: 159 G 159 >gi|145225292|ref|YP_001135970.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK] gi|315445589|ref|YP_004078468.1| thymidylate kinase [Mycobacterium sp. Spyr1] gi|145217778|gb|ABP47182.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK] gi|315263892|gb|ADU00634.1| thymidylate kinase [Mycobacterium sp. Spyr1] Length = 209 Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 22/194 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDE 61 + I EG++GAGK T + L+ + V P PA AA + G Sbjct: 1 MLIVIEGVDGAGKRTLTNGLRAAFESGGRSVATLAFPRYGVSVPADVAAEALHGQHGDLA 60 Query: 62 FGAEAEAIVFAAAR------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----D 110 A A++FA R + H+ + +++ DR++ S+ AY R D Sbjct: 61 DSVYAMAMLFAMDRAGARDEIGHLTSAY-------SVVILDRYVASNAAYSAARLHQGAD 113 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++ L+ ++ +P ++LD+P ++ +R NR + + D +ER D + Sbjct: 114 GDVVAWVRDLEYGRLKLPVPTWQVLLDVPTELAAQRAVNRAAEDAARARDAYERDD-GLQ 172 Query: 171 EKRRQIFLDIARNQ 184 + ++ ++A Q Sbjct: 173 RRTGAVYAELAAAQ 186 >gi|49456925|emb|CAG46783.1| DTYMK [Homo sapiens] Length = 212 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 43/203 (21%), Positives = 85/203 (41%), Gaps = 19/203 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + + ++ V++ Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSDVED 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 66 HSAH---LLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + ++ E+ + F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 ++ +VD++ S ++V +I Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDI 191 >gi|16975313|pdb|1E9C|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Appnp gi|16975314|pdb|1E9D|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With Aztmp And Adp gi|16975315|pdb|1E9E|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With Dtmp And Adp Length = 215 Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust. Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G I EG++ AGK+T L L + + R P + E + LLS + Sbjct: 9 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V +I+ L +G L+ DR+ S AY G + ++ LD Sbjct: 65 DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAYTG---AKENFSLDWC 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + ++ E+ + F + Sbjct: 121 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ +VD++ S ++V +I Sbjct: 171 MKDTTLNWKMVDASKSIEAVHEDI 194 >gi|198417043|ref|XP_002128464.1| PREDICTED: similar to deoxythymidylate kinase [Ciona intestinalis] Length = 209 Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust. Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 29/224 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDE 61 G I EG++ +GKTT L L KN V + + P T +++ +D+ Sbjct: 6 GALIVVEGLDRSGKTTQCQKLITALNEKNQKVKLLKFPDRTTEIGKTINSYLVKKSNLDD 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + +++ L +G L+ DR+ S A+ + + L LD + Sbjct: 66 ---RAIHLLFSANRWEKRSEMLQD-LNDGVTLIVDRYAYSGAAFSAAK---KGLELDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD + L+L + R + RY E F++K + L Sbjct: 119 SPDSGLPQPDLVLFLELSTSVAATRGGYGEERYETTE------FQKK----------VAL 162 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLSS 221 + + + ++D+ V ++L+ V + ++K ++ P+ + Sbjct: 163 NFHGLKTEEWKVIDAGRDMFEVHQDMLSFVEKTMEKVKLQPVGT 206 >gi|303229617|ref|ZP_07316405.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a] gi|302515742|gb|EFL57696.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a] Length = 228 Score = 36.6 bits (83), Expect = 2.6, Method: Compositional matrix adjust. Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 16/150 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G+GK T L LQ + + V P A + LS +FG Sbjct: 2 GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLS---GQFG 58 Query: 64 AEAEAI-------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114 + +++ ++A R + +G I++ DR+ S+ +Q + D+ + Sbjct: 59 TDVDSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKR 118 Query: 115 L-FLDSLQEISVQEV---MPDCTIILDLPV 140 + FL+ L++ + PD +LD+P+ Sbjct: 119 VQFLEWLEDFEFVKFGLPRPDAVCLLDVPL 148 >gi|156088733|ref|XP_001611773.1| thymidylate kinase [Babesia bovis T2Bo] gi|154799027|gb|EDO08205.1| thymidylate kinase, putative [Babesia bovis] Length = 237 Score = 36.6 bits (83), Expect = 2.7, Method: Compositional matrix adjust. Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 33/205 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA---- 64 FEGI+ +GK+T + LL + L K D + + P E +L+ + GA Sbjct: 18 FEGIDRSGKSTQVKLLSQKLTDKGIDHKLLK----FPCYETECGKMLATHLASHGAVRSR 73 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEI 123 ++F+A R + ++ ++ L+ G ++ DR+ S AY G + S + + + Sbjct: 74 RCIHLLFSANRWEMMKEIV-ATLVSGTHIIVDRYAFSGVAYSVGAENLSYEWCITADDGL 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ---NRYS-----------LRESACLDYFERKDVMI 169 + PD + LD P + R RY E + L Y+ + D + Sbjct: 133 ----LSPDLVVYLDNPAAVSAARSNFGDERYEQEGKLEAVRRVYEEFSSLPYWHKYDATL 188 Query: 170 HEK--RRQIFLDIA---RNQPDRCH 189 ++ + I+ +A +++P R H Sbjct: 189 PQEVLSKAIYERVASVLQSEPRRLH 213 >gi|215275161|sp|P0C8F9|KTHY_ASFK5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 235 Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 7/109 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF 62 G+ I+ EGI G K+T LK L+ K YDV P +P + + +L + + + Sbjct: 3 GILIAIEGINGVEKSTQAIRLKNALENKRYDVIYLHFP--SPNTDTGKLILDVLNKIVKM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAY-QGER 109 +E +F R + + AL++ I++ DR++ S AY Q +R Sbjct: 61 PSEQLHELFTKHRCEFTAEI--AALLKLNYIVIVDRYIWSGLAYAQADR 107 >gi|326428009|gb|EGD73579.1| thymidylate kinase [Salpingoeca sp. ATCC 50818] Length = 213 Score = 36.2 bits (82), Expect = 3.0, Method: Compositional matrix adjust. Identities = 53/220 (24%), Positives = 88/220 (40%), Gaps = 35/220 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+ I EG + GK+T LL L ++ + R P R ++ +D Sbjct: 5 GVLIVLEGTDRCGKSTQCKLLVEKLASLGHEAKLMRFP--------ERSTVIGGVIDKYL 56 Query: 61 ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E A ++F+A R + V ++ AL G L+ DR+ S A+ S++ L Sbjct: 57 RKEIELDDHAAHLLFSANRWELVSQ-MKQALKSGVSLVIDRYAFSGVAFT----SAKGLD 111 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKR 173 +D + PD I L+L KRV RY + E F+ K + K Sbjct: 112 MDWCKSPDANLPSPDLHIHLELDPTEAAKRVGFGSERYEVTE------FQAK---VKAKY 162 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ + R P R + + S + V +L + E +Q Sbjct: 163 EDLYASMTR-PPRRIDV--AGLSIEDVHAKVLELALEQLQ 199 >gi|327301613|ref|XP_003235499.1| thymidylate kinase [Trichophyton rubrum CBS 118892] gi|326462851|gb|EGD88304.1| thymidylate kinase [Trichophyton rubrum CBS 118892] Length = 235 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 3/143 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ AGK+T + L +FL + + R P T + + L G + Sbjct: 13 GALVVVEGLDRAGKSTQCARLHQFLVDQGHKTKYIRFPDRTTSIGKMINQYLR-GEIQLD 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +VF+A R + + R + G ++ DR+ S Y +++ + L LD Sbjct: 72 DHAVHLVFSANRWEAAAQIQRD-IESGITVIVDRYSYSGAVYSAAKENKE-LQLDWAWRP 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 V PD L++ ++ R Sbjct: 130 EVGLPRPDIWFFLNVSTEVAAAR 152 >gi|154246424|ref|YP_001417382.1| hypothetical protein Xaut_2483 [Xanthobacter autotrophicus Py2] gi|154160509|gb|ABS67725.1| protein of unknown function DUF344 [Xanthobacter autotrophicus Py2] Length = 496 Score = 36.2 bits (82), Expect = 3.1, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 24/40 (60%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 SGL I+FEG + AGK++ I L+R L + + VH P Sbjct: 298 RSGLVIAFEGSDAAGKSSTIMRLRRALDPRRFRVHPIAAP 337 >gi|325957954|ref|YP_004289420.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21] gi|325329386|gb|ADZ08448.1| Signal recognition 54 kDa protein [Methanobacterium sp. AL-21] Length = 447 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 25/41 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 I F G++G+GKTT I L ++LQ+K ++ + PAA Sbjct: 106 ILFMGLQGSGKTTSIGKLTKYLQKKGFNPAIVSTDTWRPAA 146 >gi|296817147|ref|XP_002848910.1| thymidylate kinase [Arthroderma otae CBS 113480] gi|238839363|gb|EEQ29025.1| thymidylate kinase [Arthroderma otae CBS 113480] Length = 233 Score = 36.2 bits (82), Expect = 3.2, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 3/143 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ AGK+T + L +FL + + V R P T + L G + Sbjct: 11 GALVVVEGLDRAGKSTQCATLYQFLINQGHKVKYIRFPDRTTSIGQMIDKYLR-GEIQLD 69 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++F+A R + IR + G ++ DR+ S Y ++ ++ L LD Sbjct: 70 DHAVHLLFSANRWEAAAQ-IRQDIEGGITVIVDRYSYSGAVYSAAKE-NKELQLDWAWRP 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + PD L++ + KR Sbjct: 128 EIGLPRPDIWFFLNISTESAAKR 150 >gi|157865253|ref|XP_001681334.1| thymidylate kinase-like protein [Leishmania major] gi|68124630|emb|CAJ02337.1| thymidylate kinase-like protein [Leishmania major strain Friedlin] Length = 363 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 43/197 (21%), Positives = 81/197 (41%), Gaps = 12/197 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58 +S I EG +GAGK T LL R + +VH P +LS Sbjct: 136 SSAEVIVVEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGKKGP 195 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116 + E + + +++ R + L G ++ DR+ +++ +Q + + F Sbjct: 196 ISELNPQLFSFLYSLNRFGCARQ-LHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAF 254 Query: 117 LDSLQEISVQEV-MPDCTII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L+ + V+ + +P T + LDLP + L+ ++ + ++ LD E E+ Sbjct: 255 ISDLEFMEVEWLGLPRATYVLYLDLPPAVALEAMRQDATRKQ---LDIHETAGSDYKERV 311 Query: 174 RQIFLDIARNQPDRCHI 190 RQ + + P HI Sbjct: 312 RQTYRWCCEHLPGWHHI 328 >gi|145528007|ref|XP_001449803.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417392|emb|CAK82406.1| unnamed protein product [Paramecium tetraurelia] Length = 510 Score = 36.2 bits (82), Expect = 3.3, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 18/138 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DEFG 63 I G AGKTT ++ L L+ + + V++ EAA + + G+ D + Sbjct: 89 ICITGGPCAGKTTGLNYLAEKLKERGFSVYI--------VPEAATTLFMGGGMLDLDNYS 140 Query: 64 AEAEA-----IVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLF 116 AE + ++ +L+H NV+ K ++LCDR L AY + + + + Sbjct: 141 AEGKMTFQMNLLNLQMKLEHCFNVLAMLCPPNKTPVMLCDRGLMDGKAYMDQNEWYEMIG 200 Query: 117 LDSLQEISVQEVMPDCTI 134 +L+E+ +++ D + Sbjct: 201 KYNLEEVKLRDERYDAVV 218 >gi|209515281|ref|ZP_03264148.1| thymidylate kinase [Burkholderia sp. H160] gi|209504262|gb|EEA04251.1| thymidylate kinase [Burkholderia sp. H160] Length = 238 Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust. Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ ++ G++GAGK++ + L+ R + T TP + + VD Sbjct: 18 GVLVTLCGVDGAGKSSLMERLEGACTRAGLNCVTTF----TPTRRIRKDEVFRQLVDSHW 73 Query: 64 AEAEAIVFAAAR---------------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 + + A+AR + H+ + + PAL G ++ CDR++ +S A G Sbjct: 74 HTSSSGPDASARRVDMLGILLSIMGDLVQHMSDTVIPALERGDVVFCDRYVFTSQAEIGT 133 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 R L I+ + PD L++ +RV+ R Sbjct: 134 RSDPAET-APVLHSIAGYLLRPDVAFGLNVSGATSHRRVRAR 174 >gi|56421391|ref|YP_148709.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter ATP binding protein [Geobacillus kaustophilus HTA426] gi|56381233|dbj|BAD77141.1| nitrate/sulfonate/taurine/bicarbonate ABC transporter (ATP binding protein) [Geobacillus kaustophilus HTA426] Length = 263 Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE---PGGTPAAEAARHV 53 + G F+SF G G GKTT +S++ ++ VH+ + P GT A A R V Sbjct: 29 VEKGEFVSFLGPSGCGKTTLLSIIAGLIEPTEGAVHIEGQPIWPSGTAAPAARRAV 84 >gi|17535647|ref|NP_496151.1| hypothetical protein R53.2 [Caenorhabditis elegans] gi|3024082|sp|Q22018|KTHY_CAEEL RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|3879168|emb|CAA91347.1| C. elegans protein R53.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 218 Score = 36.2 bits (82), Expect = 3.6, Method: Compositional matrix adjust. Identities = 34/151 (22%), Positives = 63/151 (41%), Gaps = 13/151 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I FEG++ +GK+T L + +K+ + + P A R + +D++ Sbjct: 8 GLLIVFEGLDRSGKSTQAKRLVESINKKSTESGDASSSPSAVLQAFPDRSSSIGKLIDQY 67 Query: 63 -------GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 A ++F+A R +IR + +G ++CDR+ S AY + + Sbjct: 68 LRKEIDMDEHALHLLFSADRFSK-NQMIRDNIAKGIDVICDRYCYSGVAYSLAKGLPEQW 126 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 S V PD + D+ ++ +R Sbjct: 127 VRSS----DVGLPKPDAVLFFDVSPEVAAQR 153 >gi|37524928|ref|NP_928272.1| hypothetical protein plu0936 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784354|emb|CAE13231.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 178 Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust. Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 20/146 (13%) Query: 55 LSCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDS 111 +S + E G ++ A+ A LD + +I+P L++GKI++CD + Y Y Sbjct: 22 ISAPLGELGDRHWILLIASWFAVLDSL--IIQPCLLQGKIIICDSWY---YKYLARFLLK 76 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 S L S +S+ PD I LD+P I KR + ES L+ E+ D + ++ Sbjct: 77 STELAKLSKSALSIN-TKPDMVIYLDVPPSIAEKR-KEILKPSESGKLEINEKYDFIEYQ 134 Query: 172 K----RRQIFLDIARNQPDRCHIVDS 193 K + Q F D D I+D+ Sbjct: 135 KHVLNQYQTFYD------DTWKIIDA 154 >gi|302895715|ref|XP_003046738.1| hypothetical protein NECHADRAFT_91240 [Nectria haematococca mpVI 77-13-4] gi|256727665|gb|EEU41025.1| hypothetical protein NECHADRAFT_91240 [Nectria haematococca mpVI 77-13-4] Length = 1157 Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust. Identities = 14/41 (34%), Positives = 24/41 (58%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 + G F++F G G GK+T I+LL+RF +++ + P Sbjct: 927 IKKGQFVAFVGASGCGKSTMIALLERFYDPSTGSINIDKSP 967 >gi|297669947|ref|XP_002813145.1| PREDICTED: thymidylate kinase-like isoform 1 [Pongo abelii] Length = 212 Score = 35.8 bits (81), Expect = 4.1, Method: Compositional matrix adjust. Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 15/201 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T L L + + R P + L D Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD-VE 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD ++ Sbjct: 65 DHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWCKQP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V PD + L L + KR + ++ E+ F + R+ Sbjct: 121 DVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENRAFQERALWCFHQLMRD 170 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 +VD++ S ++V +I Sbjct: 171 TTLNWKMVDASKSIEAVHEDI 191 >gi|260943900|ref|XP_002616248.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720] gi|238849897|gb|EEQ39361.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720] Length = 208 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 8/103 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T L L D + + P TP + L++ D Sbjct: 3 GRLILIEGLDRSGKSTQAENLASAL-----DAQLYKFPDRSTPVGKLINEYLVNSSFD-L 56 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 EA ++F+A R + V + + L+ G+ ++ DR++ S AY Sbjct: 57 SDEAAHLLFSANRWE-VAHEMEATLLRGQNIVLDRYIYSGIAY 98 >gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter ruminantium M1] gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter ruminantium M1] Length = 444 Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFG-- 63 I F G++G+GKTT I L R+LQRK + V PAA E + + + +G Sbjct: 102 ILFLGLQGSGKTTTIGKLCRYLQRKGFSPAVVCTDTWRPAAYEQLKQLTEEMQIQLYGDP 161 Query: 64 AEAEAIVFAAARLDHVEN 81 +A+ A L H +N Sbjct: 162 DNKDALDLAEKGLKHFKN 179 >gi|255955699|ref|XP_002568602.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590313|emb|CAP96490.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255] Length = 223 Score = 35.8 bits (81), Expect = 4.3, Method: Compositional matrix adjust. Identities = 47/215 (21%), Positives = 86/215 (40%), Gaps = 22/215 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ AGK++ +L+ L R+ + V R P TP + L G Sbjct: 12 GALIVVEGLDRAGKSSQCEMLRDSLSRQGHVVKYIRFPDRTTPIGKLIDSYLR--GSSHQ 69 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++F+A R + + I + G ++ DR+ S Y + ++ L L+ Sbjct: 70 DDHSIHLLFSANRWE-IAKSIEEDIANGTTVIVDRYSYSGVVYSAAK-ANPTLSLEWAWR 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD + L + + KR RY E + + R++F Sbjct: 128 PEIGLPRPDICLFLSISPEEAAKRGGFGAERYENGE-------------MQTRVRELFQT 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I Q D I+D+ S + V+ I +V + + + Sbjct: 175 IFEKQQD-VSIIDAGKSIEEVSQEIRGVVADCIAR 208 >gi|312200592|ref|YP_004020653.1| thymidylate kinase [Frankia sp. EuI1c] gi|311231928|gb|ADP84783.1| thymidylate kinase [Frankia sp. EuI1c] Length = 223 Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 21/153 (13%) Query: 5 LFISFEGIEGAGKTT-------HISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVL 54 + ++ EGI+GAGK T ++ R + R YDV EP G PA A Sbjct: 1 MIVAIEGIDGAGKNTLTQALVAALTATGRPVSRLAFPRYDV----EPLG-PAVRAMLTGD 55 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + A A++FA R + + A + ++L DR++ S+ AY R S+ Sbjct: 56 QALAPVAASVRASALLFALDRANAGPELAAAAAGDA-VVLVDRYVASNAAYGAARLSAPE 114 Query: 115 L--FLDSLQEISVQEVM---PDCTIILDLPVDI 142 F D + I + ++ PD I+L +PV++ Sbjct: 115 RPGFRDWVASIELTDLALPRPDLQILLRVPVEV 147 >gi|291415046|ref|XP_002723764.1| PREDICTED: thymidylate kinase isoform 1 [Oryctolagus cuniculus] Length = 212 Score = 35.8 bits (81), Expect = 4.6, Method: Compositional matrix adjust. Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 23/205 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T L L+ + + R P + E + LLS +++ Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFP--ERSTEIGK--LLSSYLEK-K 60 Query: 64 AEAE----AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E E ++F+A R + V I+ L +G L+ DR+ S A+ + ++ L+ Sbjct: 61 SEVEDHSVHLLFSANRWEQV-PFIKEKLSQGVTLVVDRYAFSGVAFT---SAKENFSLEW 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ V PD + L L ++ S E C Y R E+ Q F Sbjct: 117 CKQPDVGLPRPDLVLFLQL-------KLAEAASRGEFGCERYESR---AFQERALQGFHQ 166 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 + R+ +VD++ S + V I Sbjct: 167 LMRDPSLNWKMVDASKSIEDVHEEI 191 >gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2] gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2] Length = 443 Score = 35.8 bits (81), Expect = 4.7, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 9/74 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDEFG--A 64 G++G+GKTT ++ L R+ Q++ Y V V T PG A + +L ++ FG Sbjct: 107 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPG---AYHQLKQLLDPYHIEVFGDPQ 163 Query: 65 EAEAIVFAAARLDH 78 E +AI A + H Sbjct: 164 EKDAIKLAREGVKH 177 >gi|119478380|ref|ZP_01618388.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143] gi|119448589|gb|EAW29835.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143] Length = 226 Score = 35.8 bits (81), Expect = 4.8, Method: Compositional matrix adjust. Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 31/214 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ EG G GKTT L ++ NY + + P + +H Sbjct: 20 FIAIEGAIGVGKTT---LARQLADTFNYQTLLENAEQNPFLERFYQNQKH---------- 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDS-L 120 A A + F R +E++ + + E + + D +D + Q D+ + D Sbjct: 67 AALATQLFFLFQRSQQIEDLRQGDIFE-PVRVSDFLIDKDKLFAQLNLDADEFQLYDKVF 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLD 179 Q++++ PD I L VD+ L R+QNR + +Y E I+E + FL Sbjct: 126 QQLTIDAPKPDLVIYLQASVDVLLARIQNRGVEFEQRISRNYLES----INEAYSEFFL- 180 Query: 180 IARNQP------DRCHIVDSAHSFQSVATNILNI 207 + P D +V+ ++ + + +LNI Sbjct: 181 YYDDAPLLIVNADEMDVVNRSNDYTQLVDYLLNI 214 >gi|159122877|gb|EDP47997.1| ABC multidrug transporter, putative [Aspergillus fumigatus A1163] Length = 1274 Score = 35.8 bits (81), Expect = 4.9, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1047 IQSGQFVAFVGPSGCGKTTVISLLERF 1073 >gi|70982708|ref|XP_746882.1| ABC multidrug transporter [Aspergillus fumigatus Af293] gi|66844506|gb|EAL84844.1| ABC multidrug transporter, putative [Aspergillus fumigatus Af293] Length = 1274 Score = 35.8 bits (81), Expect = 4.9, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1047 IQSGQFVAFVGPSGCGKTTVISLLERF 1073 >gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter thermautotrophicus str. Delta H] gi|3334341|sp|O27376|SRP54_METTH RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter thermautotrophicus str. Delta H] Length = 442 Score = 35.8 bits (81), Expect = 4.9, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 25/41 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 I F G++G+GKTT I L R+L++K + V V PAA Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142 >gi|108803279|ref|YP_643216.1| hypothetical protein Rxyl_0430 [Rubrobacter xylanophilus DSM 9941] gi|108764522|gb|ABG03404.1| conserved hypothetical protein [Rubrobacter xylanophilus DSM 9941] Length = 680 Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%) Query: 23 LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV 82 L +R L R + +V + R+P G PA AA L G G E + AA R H+E Sbjct: 377 LARRLLSRGSLEVAIYRDPAGRPAGFAASLRLRRAG----GEERDPAALAALR--HLEG- 429 Query: 83 IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIIL 136 R L G+ RF + +YQ + + + LD++ + P CT+++ Sbjct: 430 -RGPLRTGEEAALLRFWMARSSYQSG-PALRGILLDAVLRHVLDAPPPACTLLV 481 >gi|312067737|ref|XP_003136884.1| thymidylate kinase [Loa loa] gi|307767957|gb|EFO27191.1| thymidylate kinase [Loa loa] Length = 213 Score = 35.4 bits (80), Expect = 5.2, Method: Compositional matrix adjust. Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 17/209 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG + GK+ L ++ +V + P + L V+ Sbjct: 7 GAFIVFEGCDRVGKSLQSRKLVERIKATGGNVDLISFPDRSSDLGKFIDRYLKKEVEMEP 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA +VFAA R + +++ L++G L+ DR+ S AY + + ++ ++ + Sbjct: 67 KEAH-LVFAANRQALMPLMVKE-LLKGTHLVVDRYAYSGIAYTLAK-GADNVTMEWAKLA 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + E+ PDC I +L + KR +S F+ K I EK +A Sbjct: 124 DMGELKPDCVIYFNLSFEEAQKRSGFGDERFDSGS---FQGKVNDIMEK-------LAAE 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 D +VD++ + ++ N VW+LV Sbjct: 174 DRDLWKVVDASLPIEVISEN----VWKLV 198 >gi|268323396|emb|CBH36984.1| thymidylate kinase [uncultured archaeon] Length = 204 Score = 35.4 bits (80), Expect = 5.3, Method: Compositional matrix adjust. Identities = 38/161 (23%), Positives = 78/161 (48%), Gaps = 13/161 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GK T LLK+ L +K + V P L ++ + Sbjct: 1 MLINFEGIDGSGKRTQSKLLKKELLKKGFKVADFSYPDYDSEYGKLIKGFLEAKLN-LSS 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + +++ + + E VI+ L +G +++ DR+ S+ AYQ S+ + + + ++ Sbjct: 60 DEQFLLYLIDIVKNKEEVIQ-KLRKGHVVIMDRYFLSTIAYQ----SANNFDYEVAKAVT 114 Query: 125 --VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 +Q +P +++P+DI +R ++ +D FE Sbjct: 115 KLIQLPLPSVIFYIEIPLDIASRRKS-----KQKGIVDRFE 150 >gi|146078976|ref|XP_001463654.1| thymidylate kinase-like protein [Leishmania infantum JPCM5] gi|134067741|emb|CAM66020.1| thymidylate kinase-like protein [Leishmania infantum JPCM5] gi|322497056|emb|CBZ32126.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 363 Score = 35.4 bits (80), Expect = 5.4, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 12/197 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CG 58 +S I EG +GAGK T LL R + +VH P +LS Sbjct: 136 SSAEVIVIEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGRKGS 195 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116 + E + + +++ R + L G ++ DR+ +++ +Q + + F Sbjct: 196 ISELNPQLFSFLYSLNRFGCARQ-LHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAF 254 Query: 117 LDSLQEISVQEV-MPDCTII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L+ + V+ + +P T + LDLP L+ ++ R S R+ LD E E+ Sbjct: 255 ISDLEFMEVEWLGLPRATYVLYLDLPPAAALEAMR-RDSTRKQ--LDIHETAGSDYKERV 311 Query: 174 RQIFLDIARNQPDRCHI 190 RQ + + P HI Sbjct: 312 RQTYRWCCEHLPGWHHI 328 >gi|219886119|gb|ACL53434.1| unknown [Zea mays] Length = 255 Score = 35.4 bits (80), Expect = 5.5, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ +GKT+ + L FL+ K Y+ R P A + ++ S ++ Sbjct: 53 GALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFP---DRATSVGQMISSYLANDSQ 109 Query: 64 AEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + I +F+A R + ++ L+ G L+ DR+ S A+ +++ L ++ + Sbjct: 110 LDDRTIHLLFSANRWEK-RALMESKLLSGTTLIVDRYSYSGVAF----SAAKGLDIEWCK 164 Query: 122 EISVQEVMPDCTIILDL 138 + PD I LD+ Sbjct: 165 APENGLIAPDLVIYLDV 181 >gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter marburgensis str. Marburg] gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter marburgensis str. Marburg] Length = 442 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 25/41 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 I F G++G+GKTT I L R+L++K + V V PAA Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142 >gi|303319671|ref|XP_003069835.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109521|gb|EER27690.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320034114|gb|EFW16059.1| thymidylate kinase [Coccidioides posadasii str. Silveira] Length = 228 Score = 35.4 bits (80), Expect = 5.6, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ AGK+T ++L L+ K ++ R P T + L G Sbjct: 14 MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLR-GET 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A ++F+A R + + + IR + G ++ DR+ S Y ++ ++ L L+ Sbjct: 73 QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAKN-NRELSLEWA 130 Query: 121 QEISVQEVMPDCTIILDLPVD-------IGLKRVQN 149 + + PD L++ + GL+R +N Sbjct: 131 WQSEIGLPRPDLWFFLNISPEKAESRGGYGLERYEN 166 >gi|119183198|ref|XP_001242660.1| hypothetical protein CIMG_06556 [Coccidioides immitis RS] Length = 228 Score = 35.4 bits (80), Expect = 5.8, Method: Compositional matrix adjust. Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 10/156 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ AGK+T ++L L+ K ++ R P T + L G Sbjct: 14 MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYLR-GET 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A ++F+A R + + + IR + G ++ DR+ S Y ++ ++ L L+ Sbjct: 73 QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAKN-NRELSLEWA 130 Query: 121 QEISVQEVMPDCTIILDLPVD-------IGLKRVQN 149 + + PD L++ + GL+R +N Sbjct: 131 WQPEIGLPRPDLWFFLNISPEEAESRGGYGLERYEN 166 >gi|237751787|ref|ZP_04582267.1| thymidylate kinase [Helicobacter bilis ATCC 43879] gi|229373153|gb|EEO23544.1| thymidylate kinase [Helicobacter bilis ATCC 43879] Length = 214 Score = 35.4 bits (80), Expect = 6.0, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 36/173 (20%) Query: 10 EGIEGAGKTTHISLLKR---FLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60 EGI+ +GKTT +L+K+ + +NY + V EPG T R +LL Sbjct: 7 EGIDTSGKTTQCNLIKQNYPCVSLENYKDSIKDSIIVLNEPGSTYLGNLVRKILLDSQT- 65 Query: 61 EFGAEAEAIVFAAAR------LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + ++ ++F A R L ++ N I + DR L S AY D + Sbjct: 66 QINEKSSFLLFLAQRAELFLQLKNISNTI----------IADRSLISGVAYARAIDMREA 115 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 L +L + ++P + L+ D R+ + LD E+K + Sbjct: 116 L---NLNLFATGGILPQKIVFLETSKDTLKSRLN-------AKSLDNIEQKGI 158 >gi|195121060|ref|XP_002005039.1| GI19275 [Drosophila mojavensis] gi|193910107|gb|EDW08974.1| GI19275 [Drosophila mojavensis] Length = 211 Score = 35.4 bits (80), Expect = 6.1, Method: Compositional matrix adjust. Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 7/104 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI FEG + GK+T + L L+ K P + + L E Sbjct: 7 GAFIVFEGCDRVGKSTQSNQLCERLKEKGIAAKKINFPNRSTIIGDVINRFLK-NTQELS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 E ++F+A R + + + I+ L+ G ++CDR YAY G Sbjct: 66 HEVIHLLFSANRWECMSS-IQADLLAGTTIICDR-----YAYSG 103 >gi|119488269|ref|XP_001262673.1| ABC multidrug transporter, putative [Neosartorya fischeri NRRL 181] gi|119410831|gb|EAW20776.1| ABC multidrug transporter, putative [Neosartorya fischeri NRRL 181] Length = 1297 Score = 35.4 bits (80), Expect = 6.1, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1070 IQSGQFVAFVGPSGCGKTTVISLLERF 1096 >gi|157116910|ref|XP_001652904.1| Thymidylate kinase, putative [Aedes aegypti] gi|108883432|gb|EAT47657.1| Thymidylate kinase, putative [Aedes aegypti] Length = 249 Score = 35.4 bits (80), Expect = 6.2, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 9/155 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG + AGKTT + L + P + A + L+ D F Sbjct: 47 GALIVLEGCDRAGKTTQCKRIVESLNSAGHKAKFMNFPDRSTQFGALINSYLT-SKDNFT 105 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA ++F R + +N + L G L+ DR+ S A+ +++ L +D + Sbjct: 106 DEAIHLLFTLNRWE-AKNEMERLLRSGVTLIVDRYSYSGVAFS----AAKGLNMDWCKAP 160 Query: 124 SVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRE 155 PD ++L L + KR Q RY + E Sbjct: 161 ETGLPKPDLVLLLTLTAEAMAKRGGFGQERYEVPE 195 >gi|297793501|ref|XP_002864635.1| thymidylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297310470|gb|EFH40894.1| thymidylate kinase family protein [Arabidopsis lyrata subsp. lyrata] Length = 263 Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust. Identities = 31/135 (22%), Positives = 59/135 (43%), Gaps = 6/135 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ +GK+T + L FL+ + + R P + LS + Sbjct: 59 GALIVLEGLDRSGKSTQCAKLLSFLEGLGHPTELWRFPDRETSVGQMISAYLS-NKSQLD 117 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + +++ L G L+ DR+ S A+ S++ L +D + Sbjct: 118 DHTIHLLFSANRWEK-RSLMEEKLKTGTTLIVDRYSYSGVAF----SSAKGLNIDWCKAP 172 Query: 124 SVQEVMPDCTIILDL 138 + + PD + LD+ Sbjct: 173 EIGLLAPDSVLYLDI 187 >gi|238507367|ref|XP_002384885.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357] gi|220689598|gb|EED45949.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357] Length = 1314 Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1075 IKSGQFVAFVGPSGCGKTTVISLLERF 1101 >gi|329896234|ref|ZP_08271412.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088] gi|328921905|gb|EGG29272.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088] Length = 224 Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 56/147 (38%), Gaps = 13/147 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG+ G GKTT L + Q + T P T E R L+ + Sbjct: 17 FIAIEGVIGVGKTTLARRLAQTFQYQTILEDPTANPFLTKFYEDMRQHALATQLSFLFQR 76 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123 +AI +R + + + + D L D +A L+ Q++ Sbjct: 77 TQAI-----------QALRQSDIFAPLHVADFMLQKDPLFARLTLNSEEYELYDKVYQQM 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR 150 +V PD I L P D+ L R++ R Sbjct: 126 TVDVPRPDLVIYLQAPTDVLLSRIERR 152 >gi|134080107|emb|CAK46088.1| unnamed protein product [Aspergillus niger] Length = 1319 Score = 35.4 bits (80), Expect = 6.4, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1092 IESGQFVAFVGPSGCGKTTVISLLERF 1118 >gi|242046716|ref|XP_002461104.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor] gi|241924481|gb|EER97625.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor] Length = 254 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 10/137 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + EG++ +GK++ + L FL+ K YD R P A + ++ + +E Sbjct: 52 GALVVLEGLDRSGKSSQCARLLSFLKGKGYDAEGWRFP---DRATSVGQMISAYLANESQ 108 Query: 64 AEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + I +F+A R + ++ L+ G L+ DR+ S A+ +++ L ++ + Sbjct: 109 LDDRTIHLLFSANRWEK-RALMESKLLSGTTLVVDRYSYSGVAF----SAAKGLDIEWCK 163 Query: 122 EISVQEVMPDCTIILDL 138 + PD I LD+ Sbjct: 164 APENGLIAPDLVIYLDV 180 >gi|222111640|ref|YP_002553904.1| ABC transporter-like protein [Acidovorax ebreus TPSY] gi|221731084|gb|ACM33904.1| ABC transporter related [Acidovorax ebreus TPSY] Length = 256 Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 32/137 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH-----VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGKTT +LL +FL+ + +H +TRE PA A R V+ S + Sbjct: 38 GPNGAGKTTCFNLLTKFLEPTSGTIHFNGHDITRE---QPAQIARRGVIRSFQI------ 88 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQ--HLFLDSLQE 122 +A H+ LME L R L +SY + + ER SQ + L E Sbjct: 89 -------SAVFPHL------TLMENVRLGLQRKLGTSYHFWRSERSLSQLNDRAVQLLTE 135 Query: 123 ISVQEVMPDCTIILDLP 139 + +QE+ + T+ +LP Sbjct: 136 VGLQELADEVTV--NLP 150 >gi|317033746|ref|XP_001395392.2| lipid A export ATP-binding/permease protein msbA [Aspergillus niger CBS 513.88] Length = 1291 Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1064 IESGQFVAFVGPSGCGKTTVISLLERF 1090 >gi|60831889|gb|AAX36988.1| deoxythymidylate kinase [synthetic construct] Length = 213 Score = 35.0 bits (79), Expect = 6.9, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G I EG++ AGK+T L L + + R P + E + LLS + Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 62 DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + ++ E+ + F + Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ +VD++ S ++V +I Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDI 191 >gi|328874643|gb|EGG23008.1| signal recognition particle 54 kDa subunit [Dictyostelium fasciculatum] Length = 502 Score = 35.0 bits (79), Expect = 7.0, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVDE 61 I F G++GAGKTT ++ L F +RK ++ + T G A +H + Sbjct: 103 IIMFVGLQGAGKTTSVTKLAHFYKRKGWNTAMVCADTFRAG---AFAQLQHNATKAKIPF 159 Query: 62 FGAEAEAIVFAAAR 75 +G+E+E AAA+ Sbjct: 160 YGSESEKDPVAAAK 173 >gi|83776389|dbj|BAE66508.1| unnamed protein product [Aspergillus oryzae] Length = 1189 Score = 35.0 bits (79), Expect = 7.1, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 962 IESGQFVAFVGPSGCGKTTVISLLERF 988 >gi|42544174|ref|NP_036277.2| thymidylate kinase isoform 1 [Homo sapiens] gi|114584335|ref|XP_001161768.1| PREDICTED: deoxythymidylate kinase (thymidylate kinase) isoform 3 [Pan troglodytes] gi|56405325|sp|P23919|KTHY_HUMAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12804775|gb|AAH01827.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens] gi|49456983|emb|CAG46812.1| DTYMK [Homo sapiens] gi|62822371|gb|AAY14920.1| unknown [Homo sapiens] gi|119591690|gb|EAW71284.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_b [Homo sapiens] gi|187955102|gb|AAI47007.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens] gi|187955947|gb|AAI47011.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens] Length = 212 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G I EG++ AGK+T L L + + R P + E + LLS + Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 62 DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + ++ E+ + F + Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ +VD++ S ++V +I Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDI 191 >gi|33303857|gb|AAQ02442.1| deoxythymidylate kinase [synthetic construct] gi|54696972|gb|AAV38858.1| deoxythymidylate kinase (thymidylate kinase) [synthetic construct] Length = 213 Score = 35.0 bits (79), Expect = 7.2, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G I EG++ AGK+T L L + + R P + E + LLS + Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 62 DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + ++ E+ + F + Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ +VD++ S ++V +I Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEDI 191 >gi|317159234|ref|XP_001827641.2| lipid A export ATP-binding/permease protein msbA [Aspergillus oryzae RIB40] Length = 1310 Score = 35.0 bits (79), Expect = 7.3, Method: Compositional matrix adjust. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1083 IESGQFVAFVGPSGCGKTTVISLLERF 1109 >gi|14488796|pdb|1E2D|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Monophosphate, Adenosine Diphosphate And A Magnesium-Ion gi|14488797|pdb|1E2E|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Monophosphate, Adenosine Diphosphate,A Magnesium-Ion And Alf3 gi|14488798|pdb|1E2F|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Monophosphate, Adenosine Diphosphate And A Magnesium-Ion gi|14488799|pdb|1E2G|A Chain A, Human Thymidylate Kinase Complexed With Adp, Tdp And A Magnesium-Ion gi|14488800|pdb|1E2Q|A Chain A, Human Thymidylate Kinase Complexed With Tp5a And A Magnesium-Ion gi|16975361|pdb|1E99|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Adp gi|16975362|pdb|1E9A|A Chain A, Human Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Aztp5a gi|16975363|pdb|1E9B|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Appnp gi|29726714|pdb|1NMX|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp And Adp gi|29726716|pdb|1NMZ|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Nh2tmp And Appnhp gi|29726717|pdb|1NN0|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp And Adp gi|29726718|pdb|1NN1|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp And Appnhp gi|29726719|pdb|1NN3|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp + Adp gi|29726720|pdb|1NN5|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp + Appnhp Length = 215 Score = 35.0 bits (79), Expect = 7.4, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G I EG++ AGK+T L L + + R P + E + LLS + Sbjct: 9 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 65 DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWC 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + ++ E+ + F + Sbjct: 121 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ +VD++ S ++V +I Sbjct: 171 MKDTTLNWKMVDASKSIEAVHEDI 194 >gi|241758681|ref|ZP_04756795.1| deoxyguanosine kinase [Neisseria flavescens SK114] gi|241321192|gb|EER57388.1| deoxyguanosine kinase [Neisseria flavescens SK114] Length = 211 Score = 35.0 bits (79), Expect = 7.6, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G+GKT L R L + ++ P P + V G Sbjct: 5 YIVVEGAIGSGKTA----LSRRLAEHFSALLLSENPDHNPFL-----MKFYSNVSNNGLA 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 AE + F R + V N+I +G +++ D FL D + D Q LF D Q Sbjct: 56 AE-LFFLTRRAESV-NIIDDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFADMKQR 112 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 I Q PD I L V+ KR+Q R+ Sbjct: 113 ILPQYAEPDVVIYLQTAVENNRKRLQKRH 141 >gi|261379860|ref|ZP_05984433.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703] gi|284797557|gb|EFC52904.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703] Length = 211 Score = 35.0 bits (79), Expect = 7.7, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 60/149 (40%), Gaps = 15/149 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G+GKT L R L + ++ P P + V G Sbjct: 5 YIVVEGAIGSGKTA----LSRRLAEHFSALLLSENPDHNPFL-----MKFYSNVSNNGLA 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 AE + F R + V N+I +G +++ D FL D + D Q LF D Q Sbjct: 56 AE-LFFLMRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFADMKQR 112 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 I Q PD I L V+ KR+Q R+ Sbjct: 113 ILPQYAEPDVVIYLQTAVENNRKRLQKRH 141 >gi|161407223|ref|YP_638514.2| thymidylate kinase [Mycobacterium sp. MCS] Length = 210 Score = 35.0 bits (79), Expect = 7.8, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 19/175 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEA--ARHVLLS 56 + I+ EG++GAGK T + ++ + V P AAEA RH L+ Sbjct: 1 MLIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLA 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DS 111 V A A++FA R D + + A +++ DR++ S+ AY R D Sbjct: 61 ESV-----YAMAVLFALDRADARDEIAHLAAAH-DVVILDRYVASNAAYSAARLHQSADG 114 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 ++ SL+ + D I+LD+P + +R + R D +ER D Sbjct: 115 EAVEWVRSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYERDD 169 >gi|29726715|pdb|1NMY|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp And Appnhp Length = 209 Score = 35.0 bits (79), Expect = 7.8, Method: Compositional matrix adjust. Identities = 45/204 (22%), Positives = 86/204 (42%), Gaps = 21/204 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---D 60 G I EG++ AGK+T L L + + R P + E + LLS + Sbjct: 3 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFP--ERSTEIGK--LLSSYLQKKS 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 59 DVEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTG---AKENFSLDWC 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + ++ E+ + F + Sbjct: 115 KQPDVGLPKPDLVLFLQLQLADAAKR----------GAFGHERYENGAFQERALRCFHQL 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNI 204 ++ +VD++ S ++V +I Sbjct: 165 MKDTTLNWKMVDASKSIEAVHEDI 188 >gi|215428729|ref|ZP_03426648.1| thymidylate kinase [Mycobacterium tuberculosis T92] gi|289751941|ref|ZP_06511319.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92] gi|289692528|gb|EFD59957.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92] Length = 214 Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 12/186 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T + L + V P G + AA+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A +FA R V + L G +++ DR++ S+ AY R +++ Sbjct: 61 SSVYAMATLFALDRAGAVHTI--QGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAA 118 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +Q I + PD ++L + ++ +R + R D +ER D + ++ Sbjct: 119 WVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGA 177 Query: 176 IFLDIA 181 ++ ++A Sbjct: 178 VYAELA 183 >gi|119591691|gb|EAW71285.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_c [Homo sapiens] Length = 254 Score = 35.0 bits (79), Expect = 8.0, Method: Compositional matrix adjust. Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 15/201 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++ AGK+T L L + + R P + L D Sbjct: 6 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD-VE 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD ++ Sbjct: 65 DHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCKQP 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V PD + L L + KR + E+ E+ + F + ++ Sbjct: 121 DVGLPKPDLVLFLQLQLADAAKRGAFGHERYENGAF----------QERALRCFHQLMKD 170 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 +VD++ S ++V +I Sbjct: 171 TTLNWKMVDASKSIEAVHEDI 191 >gi|299745593|ref|XP_001831821.2| thymidylate kinase [Coprinopsis cinerea okayama7#130] gi|298406658|gb|EAU90004.2| thymidylate kinase [Coprinopsis cinerea okayama7#130] Length = 237 Score = 35.0 bits (79), Expect = 8.2, Method: Compositional matrix adjust. Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 12/143 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG++ +GKTT +LL+ L+ + + + P T L E Sbjct: 11 FIVIEGLDRSGKTTQTALLQSRLESELGASTKLMKFPDRTTTIGQMIDSYLKSD-SELDD 69 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---------QGERDSSQHL 115 ++F+A R + + R L EG ++LCDR+ S A+ G +S L Sbjct: 70 HVIHLLFSANRWELASTIER-LLNEGTVVLCDRYAFSGIAFSASKVVPERSGSGESVPKL 128 Query: 116 FLDSLQEISVQEVMPDCTIILDL 138 + + + PD + LD+ Sbjct: 129 PFEWCRAPDIGLPAPDLVLFLDI 151 >gi|15610383|ref|NP_217764.1| thymidylate kinase [Mycobacterium tuberculosis H37Rv] gi|15842836|ref|NP_337873.1| thymidylate kinase [Mycobacterium tuberculosis CDC1551] gi|31794427|ref|NP_856920.1| thymidylate kinase [Mycobacterium bovis AF2122/97] gi|121639136|ref|YP_979360.1| thymidylate kinase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663110|ref|YP_001284633.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra] gi|148824449|ref|YP_001289203.1| thymidylate kinase [Mycobacterium tuberculosis F11] gi|167966685|ref|ZP_02548962.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra] gi|215405259|ref|ZP_03417440.1| thymidylate kinase [Mycobacterium tuberculosis 02_1987] gi|215413125|ref|ZP_03421826.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A] gi|215432211|ref|ZP_03430130.1| thymidylate kinase [Mycobacterium tuberculosis EAS054] gi|215447550|ref|ZP_03434302.1| thymidylate kinase [Mycobacterium tuberculosis T85] gi|218755033|ref|ZP_03533829.1| thymidylate kinase [Mycobacterium tuberculosis GM 1503] gi|219559306|ref|ZP_03538382.1| thymidylate kinase [Mycobacterium tuberculosis T17] gi|224991629|ref|YP_002646318.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800289|ref|YP_003033290.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435] gi|254365871|ref|ZP_04981916.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem] gi|254552350|ref|ZP_05142797.1| thymidylate kinase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188295|ref|ZP_05765769.1| thymidylate kinase [Mycobacterium tuberculosis CPHL_A] gi|260202408|ref|ZP_05769899.1| thymidylate kinase [Mycobacterium tuberculosis T46] gi|260206598|ref|ZP_05774089.1| thymidylate kinase [Mycobacterium tuberculosis K85] gi|289444828|ref|ZP_06434572.1| thymidylate kinase [Mycobacterium tuberculosis T46] gi|289448935|ref|ZP_06438679.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A] gi|289555525|ref|ZP_06444735.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605] gi|289571474|ref|ZP_06451701.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17] gi|289575967|ref|ZP_06456194.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85] gi|289747065|ref|ZP_06506443.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987] gi|289755370|ref|ZP_06514748.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054] gi|289759387|ref|ZP_06518765.1| thymidylate kinase [Mycobacterium tuberculosis T85] gi|289763435|ref|ZP_06522813.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503] gi|294993813|ref|ZP_06799504.1| thymidylate kinase [Mycobacterium tuberculosis 210] gi|297635900|ref|ZP_06953680.1| thymidylate kinase [Mycobacterium tuberculosis KZN 4207] gi|297732897|ref|ZP_06962015.1| thymidylate kinase [Mycobacterium tuberculosis KZN R506] gi|298526723|ref|ZP_07014132.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A] gi|306777576|ref|ZP_07415913.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001] gi|306782297|ref|ZP_07420634.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002] gi|306786119|ref|ZP_07424441.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003] gi|306790487|ref|ZP_07428809.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004] gi|306795008|ref|ZP_07433310.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005] gi|306799206|ref|ZP_07437508.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006] gi|306805054|ref|ZP_07441722.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008] gi|306809240|ref|ZP_07445908.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007] gi|306969343|ref|ZP_07482004.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009] gi|306973695|ref|ZP_07486356.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010] gi|307081404|ref|ZP_07490574.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011] gi|307086008|ref|ZP_07495121.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012] gi|313660229|ref|ZP_07817109.1| thymidylate kinase [Mycobacterium tuberculosis KZN V2475] gi|61213172|sp|O05891|KTHY_MYCTU RecName: Full=Thymidylate kinase; AltName: Full=Thymidine monophosphate kinase; AltName: Full=dTMP kinase; Short=TMPK gi|16975072|pdb|1G3U|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) gi|20149891|pdb|1GSI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) gi|20149899|pdb|1GTV|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine-5'-Diphosphate (Tdp) gi|20149900|pdb|1GTV|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine-5'-Diphosphate (Tdp) gi|28373781|pdb|1MRN|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Bisubstrate Inhibitor (Tp5a) gi|28373782|pdb|1MRS|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With 5-Ch2oh Deoxyuridine Monophosphate gi|30749563|pdb|1N5I|A Chain A, Crystal Structure Of Inactive Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) At Ph 4.6 (Resolution 1.85 A) gi|30749564|pdb|1N5J|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Diphosphate (Tdp) And Thymidine Triphosphate (Ttp) At Ph 5.4 (1.85 A Resolution) gi|30749565|pdb|1N5K|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate (Resolution 2.1 A) gi|30749566|pdb|1N5K|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate (Resolution 2.1 A) gi|30749567|pdb|1N5L|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate, After Catalysis In The Crystal (2.3 A Resolution) gi|30749568|pdb|1N5L|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate, After Catalysis In The Crystal (2.3 A Resolution) gi|60593791|pdb|1W2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Deoxythymidine (Dt) (2.1 A Resolution) gi|60593792|pdb|1W2G|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Deoxythymidine (Dt) (2.1 A Resolution) gi|60593793|pdb|1W2H|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Azidothymidine Monophosphate (Azt- Mp) (2.0 A Resolution) gi|60593794|pdb|1W2H|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Azidothymidine Monophosphate (Azt- Mp) (2.0 A Resolution) gi|2072714|emb|CAB08348.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID KINASE) (TMPK) [Mycobacterium tuberculosis H37Rv] gi|13883165|gb|AAK47687.1| thymidylate kinase, putative [Mycobacterium tuberculosis CDC1551] gi|31620023|emb|CAD95367.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID KINASE) (TMPK) [Mycobacterium bovis AF2122/97] gi|121494784|emb|CAL73265.1| Probable thymidylate kinase tmk [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151384|gb|EBA43429.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem] gi|148507262|gb|ABQ75071.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra] gi|148722976|gb|ABR07601.1| thymidylate kinase tmk [Mycobacterium tuberculosis F11] gi|224774744|dbj|BAH27550.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321792|gb|ACT26395.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435] gi|289417747|gb|EFD14987.1| thymidylate kinase [Mycobacterium tuberculosis T46] gi|289421893|gb|EFD19094.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A] gi|289440157|gb|EFD22650.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605] gi|289540398|gb|EFD44976.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85] gi|289545228|gb|EFD48876.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17] gi|289687593|gb|EFD55081.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987] gi|289695957|gb|EFD63386.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054] gi|289710941|gb|EFD74957.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503] gi|289714951|gb|EFD78963.1| thymidylate kinase [Mycobacterium tuberculosis T85] gi|298496517|gb|EFI31811.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A] gi|308214118|gb|EFO73517.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001] gi|308325048|gb|EFP13899.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002] gi|308329269|gb|EFP18120.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003] gi|308333100|gb|EFP21951.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004] gi|308336787|gb|EFP25638.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005] gi|308340621|gb|EFP29472.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006] gi|308344562|gb|EFP33413.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007] gi|308348358|gb|EFP37209.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008] gi|308353195|gb|EFP42046.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009] gi|308356935|gb|EFP45786.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010] gi|308360936|gb|EFP49787.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011] gi|308364475|gb|EFP53326.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012] gi|323718116|gb|EGB27298.1| thymidylate kinase tmk [Mycobacterium tuberculosis CDC1551A] gi|326902525|gb|EGE49458.1| thymidylate kinase tmk [Mycobacterium tuberculosis W-148] gi|328460024|gb|AEB05447.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 4207] Length = 214 Score = 35.0 bits (79), Expect = 8.3, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 12/186 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T + L + V P G + AA+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A +FA R V + L G +++ DR++ S+ AY R +++ Sbjct: 61 SSVYAMATLFALDRAGAVHTI--QGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAA 118 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +Q I + PD ++L + ++ +R + R D +ER D + ++ Sbjct: 119 WVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGA 177 Query: 176 IFLDIA 181 ++ ++A Sbjct: 178 VYAELA 183 >gi|119572686|gb|EAW52301.1| zinc finger protein 92 (HTF12) [Homo sapiens] Length = 607 Score = 35.0 bits (79), Expect = 8.5, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER---KDVMIHEKRRQIFLD 179 + V +++P ++ + + V+ +SL E CLD +R +DVM+ R +FL Sbjct: 6 LQVLDLLPVGVVVAGKQGPLTFRDVKIEFSLEEWQCLDTAQRNLYRDVMLENYRNLVFLG 65 Query: 180 IARNQPD 186 IA ++PD Sbjct: 66 IAVSKPD 72 >gi|145242644|ref|XP_001393895.1| thymidylate kinase [Aspergillus niger CBS 513.88] gi|134078448|emb|CAK40391.1| unnamed protein product [Aspergillus niger] Length = 224 Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust. Identities = 46/206 (22%), Positives = 84/206 (40%), Gaps = 22/206 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEF 62 G I EG++ AGK++ L + LQ + V R P TP + L G + Sbjct: 11 GALIVVEGLDRAGKSSQCESLHQKLQDLGHSVKYIRFPDRTTPIGKLIDGYLR--GQSQL 68 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++F+A R + + I + G ++ DR+ S Y + ++ L L+ Sbjct: 69 DDHSIHLLFSANRWE-IARAIEEDIAAGITVIVDRYSYSGAVYSAAK-ANPTLSLEWAWT 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD + L + D KR RY ++ + + R++F Sbjct: 127 PEIGLPQPDLCLFLSIAPDEAAKRGGFGAERY-------------ENETMQSRVRELFQT 173 Query: 180 IARNQ-PDRCHIVDSAHSFQSVATNI 204 I R Q ++D+ SF++V+ +I Sbjct: 174 IFRVQRSGDIRVIDAGRSFEAVSVDI 199 >gi|326925772|ref|XP_003209083.1| PREDICTED: thymidylate kinase-like isoform 1 [Meleagris gallopavo] Length = 212 Score = 34.7 bits (78), Expect = 8.7, Method: Compositional matrix adjust. Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 7/136 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EF 62 G I EG++ AGK+T L + LQ + + R P T E R + + E Sbjct: 6 GALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERT--TEIGRLIGAYLSREREL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R +HV + ++ L +G L+ DR+ S A+ + ++ L+ ++ Sbjct: 64 EDHVVHLLFSANRWEHVTS-MKEKLHQGITLVVDRYAFSGVAFT---SAKENFCLEWCKQ 119 Query: 123 ISVQEVMPDCTIILDL 138 V PD + L L Sbjct: 120 PDVGLPKPDLILFLQL 135 >gi|297680323|ref|XP_002817949.1| PREDICTED: zinc finger protein 92-like isoform 1 [Pongo abelii] Length = 607 Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 3/67 (4%) Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER---KDVMIHEKRRQIFLD 179 + V +++P ++ + + V+ +SL E CLD +R +DVM+ R +FL Sbjct: 6 LQVLDLLPVGVVVAGKQGPLTFRDVKIEFSLEEWQCLDTAQRNLYRDVMLENYRNLVFLG 65 Query: 180 IARNQPD 186 IA ++PD Sbjct: 66 IAVSKPD 72 >gi|322489068|emb|CBZ24317.1| thymidylate kinase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 362 Score = 34.7 bits (78), Expect = 9.3, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 78/192 (40%), Gaps = 12/192 (6%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63 I EG +GAGK T LL R + +VH P LLS + E Sbjct: 140 IVIEGGDGAGKETQTGLLVRRVHAAGDEVHSLDFPNEKALYGGLVRALLSGKKGSISELD 199 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + + +++ R + L G ++ DR+ +++ +Q + + F+ L+ Sbjct: 200 PQLFSFLYSLNRFGCARQ-LHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 258 Query: 122 EISVQEV-MPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + V+ + +P T + LDLP L+ ++ + ++ LD E E+ RQ + Sbjct: 259 FMEVEWLGLPRATSVLYLDLPPAAALEAMRRDAARKQ---LDIHETAGSDYKERVRQTYR 315 Query: 179 DIARNQPDRCHI 190 + P HI Sbjct: 316 WCCEHLPGWHHI 327 >gi|302685608|ref|XP_003032484.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8] gi|300106178|gb|EFI97581.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8] Length = 282 Score = 34.7 bits (78), Expect = 9.8, Method: Compositional matrix adjust. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI EG++ +GK+T + LK L V + + P T A L + E Sbjct: 5 GAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNI-EMD 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 ++++A R + + + I L EG ++CDR+ S A+ + Sbjct: 64 DHVVHLLYSANRWE-LASRISTLLSEGTTIICDRYAFSGIAFSASK 108 Searching..................................................done Results from round 2 >gi|254780218|ref|YP_003064631.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62] gi|254039895|gb|ACT56691.1| thymidylate kinase [Candidatus Liberibacter asiaticus str. psy62] Length = 225 Score = 324 bits (831), Expect = 6e-87, Method: Composition-based stats. Identities = 225/225 (100%), Positives = 225/225 (100%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD Sbjct: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL Sbjct: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI Sbjct: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI Sbjct: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 >gi|315122339|ref|YP_004062828.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495741|gb|ADR52340.1| thymidylate kinase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 227 Score = 295 bits (755), Expect = 4e-78, Method: Composition-based stats. Identities = 163/224 (72%), Positives = 195/224 (87%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNSGLFISFEGIEG GKTTHIS L FL++ NYDV +TREPGGTP AEAARHVLL+ GVD Sbjct: 1 MNSGLFISFEGIEGVGKTTHISHLAGFLKKNNYDVQITREPGGTPVAEAARHVLLTGGVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EFGA AE+I+F++ RLDHVENVIRPAL+EGKILLCDRFLDSSYAYQGE+D + FLDSL Sbjct: 61 EFGAYAESILFSSIRLDHVENVIRPALIEGKILLCDRFLDSSYAYQGEKDDFKKTFLDSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q++S Q ++PDCTIILDLPVD+GL+R+++RYSL++++ LDYFERKD ++HEKRR+IFLDI Sbjct: 121 QQVSTQGIVPDCTIILDLPVDVGLQRIRHRYSLKKNSSLDYFERKDWIVHEKRRRIFLDI 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 AR+QP+RC IVD+ H FQ VA +ILNIVWEL+QKR P K D Sbjct: 181 ARDQPERCRIVDATHPFQDVAAHILNIVWELMQKRSFPRPPKGD 224 >gi|77919289|ref|YP_357104.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380] gi|123574092|sp|Q3A3X3|KTHY_PELCD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77545372|gb|ABA88934.1| thymidylate kinase [Pelobacter carbinolicus DSM 2380] Length = 216 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 115/201 (57%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FIS EGIEG+GKTT I L L+ + V +TREPGG P A+ R +LL Sbjct: 3 FFISLEGIEGSGKTTQIKRLADRLESLGHAVLITREPGGCPIADQIRQILLHPDNGHLDP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +++AAAR HV VIRPAL +GKI+LCDR+ D++ AYQG + L E++ Sbjct: 63 KAELLLYAAARAQHVAEVIRPALDQGKIVLCDRYCDATLAYQGYARGLDLPMVKQLNELA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 P T++LD+P D GL R ++R +L FE++ + H K RQ +LD+AR + Sbjct: 123 AGNCRPHLTLLLDMPHDRGLLRARSRNALGAGPEEGRFEQESLAFHNKVRQGYLDLARQE 182 Query: 185 PDRCHIVDSAHSFQSVATNIL 205 P R +VD+ + V I Sbjct: 183 PQRIKVVDANGTLDEVCHRIW 203 >gi|148265181|ref|YP_001231887.1| dTMP kinase [Geobacter uraniireducens Rf4] gi|189028834|sp|A5G696|KTHY_GEOUR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146398681|gb|ABQ27314.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 213 Score = 281 bits (720), Expect = 5e-74, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 120/211 (56%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG+EG GKTT I LL + L + + V VTREPGG P A+ AR +LL Sbjct: 2 GCFITFEGVEGCGKTTQIKLLAQHLTEQGHTVIVTREPGGCPIADQARAILLDADNRAMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR HV+ +++PAL K++LCDRF D++ AYQG + L ++ Sbjct: 62 PTTELLLYAAARAQHVQEIVKPALAANKVVLCDRFTDATIAYQGYGRGLDPATIAYLNDL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P T++LD PV++GLKR +R + A + FE + V+ H K R +L +A + Sbjct: 122 ATDGLKPRLTVLLDCPVEVGLKRAFDRINGAAGAREERFELESVLFHRKVRDGYLKLAED 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P+R I+D + Q I V + + Sbjct: 182 EPERFIIIDGSQGVQETEAAITAAVLARLAE 212 >gi|78223521|ref|YP_385268.1| thymidylate kinase [Geobacter metallireducens GS-15] gi|78194776|gb|ABB32543.1| thymidylate kinase [Geobacter metallireducens GS-15] Length = 217 Score = 280 bits (717), Expect = 1e-73, Method: Composition-based stats. Identities = 82/220 (37%), Positives = 121/220 (55%), Gaps = 4/220 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GK+T + L+ L R + V VTREPGG P A+A R +LL Sbjct: 2 GFFITFEGIEGCGKSTQVRLVAERLSRAGHGVVVTREPGGCPIADAIRAILLDARNSAMV 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV VI PAL GKI+LCDRF DS+ AYQG + L + Sbjct: 62 PMAELLLYAAARAQHVAEVIEPALAAGKIVLCDRFTDSTMAYQGFGRKLDRELIAQLNSL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LD V+ GL R R + +A + FE++ ++ HE+ R FL +A Sbjct: 122 AAGSIRPDLTLLLDCSVETGLARAMARINTSSAAREERFEQESILFHERIRDGFLSLAAA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++D + + +V E + R+ +++ Sbjct: 182 EPGRFVVLDGSGGIEE----TEALVTEAILARLPASPARR 217 >gi|95930676|ref|ZP_01313410.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684] gi|95133328|gb|EAT14993.1| Thymidylate kinase [Desulfuromonas acetoxidans DSM 684] Length = 216 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 124/210 (59%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT I LL L+ + +DV TREPGG A+ R VLL + Sbjct: 2 GQFITFEGIEGCGKTTQIRLLATALRHQGHDVIETREPGGCDIADQIRAVLLDAKNNRMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E +++AAAR HV VIRPAL GK +LCDRF D++ AYQG + +L Sbjct: 62 SPTELLLYAAARAQHVAEVIRPALDAGKTVLCDRFCDATLAYQGYGRQLDIDQITTLNAY 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q V PD T++LDLPV+IGL R + R D FE++ + H++ RQ +L +A N Sbjct: 122 ACQGVRPDTTLLLDLPVEIGLGRARQRNEQHSGPNEDRFEQESLNFHQRIRQAYLQLADN 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R I+D+ Q+VA I + + ++Q Sbjct: 182 EPQRFLIIDAQGKPQTVAERIASAMNTIIQ 211 >gi|328950279|ref|YP_004367614.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884] gi|328450603|gb|AEB11504.1| Thymidylate kinase [Marinithermus hydrothermalis DSM 14884] Length = 202 Score = 278 bits (711), Expect = 5e-73, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 12/205 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG+GK+T + L +L+++ V VTREPGGTP A R LLS + Sbjct: 1 MKPGFFITFEGPEGSGKSTQAAHLAAWLRQQGVSVVVTREPGGTPLGRAVRQWLLS---E 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +++ A R +HV +VIRPAL G++++ DRF+DSSYAYQG +L ++ Sbjct: 58 SMDPVTEFLLYTADRAEHVRHVIRPALAAGQVVISDRFVDSSYAYQGFGRGLDLEWLRAV 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ ++PD T +LDLP ++GL R R D E++ + H + R+ + + Sbjct: 118 SQPVLEGLVPDVTFLLDLPPEVGLARKAER---------DRLEQESLAFHRRVREGYRVL 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 AR +P R ++D+ + + + Sbjct: 169 ARAEPQRFVVLDATQPPEVIVEQVR 193 >gi|158319119|ref|YP_001511626.1| dTMP kinase [Alkaliphilus oremlandii OhILAs] gi|158139318|gb|ABW17630.1| dTMP kinase [Alkaliphilus oremlandii OhILAs] Length = 210 Score = 277 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG +G+GK+T I +KRFL+ K Y V +TREPGGT E R ++L Sbjct: 1 MHKGLFITIEGPDGSGKSTQIHFIKRFLEEKGYKVVLTREPGGTVIGEKIRELVLDKNHK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HV I PA+ EG I+LCDRF+DSS YQG+ + + Sbjct: 61 EMANVTEALLYAASRAQHVAQRIIPAIEEGSIVLCDRFVDSSIVYQGKGRGLGVENIRDI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD TI+LD+ +IG++R ++ + D E++ + H + ++ Sbjct: 121 NDFATMGLKPDLTILLDIDPEIGIERAKS------AKEADRLEQEKIDFHRIVYDGYKEL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R +VD+ S + V+ I I+ +++ Sbjct: 175 VQMYPERIKVVDANQSIEEVSKGIEYILNKIL 206 >gi|241204716|ref|YP_002975812.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858606|gb|ACS56273.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 236 Score = 277 bits (710), Expect = 8e-73, Method: Composition-based stats. Identities = 110/210 (52%), Positives = 150/210 (71%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEG EGAGK+T I L L+ + +DV +TREPGG+P AEA RHVLLS + F Sbjct: 15 TGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEAF 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE VIRPAL GK++LCDRF+DSS YQG + + F+++LQ Sbjct: 75 GTRMEAILFAAARNDHVEEVIRPALASGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQR 134 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ VMPDCT+ILD+P +GL+R Q R + D FE++ + HEKRR+ FLDIA Sbjct: 135 IAINGVMPDCTVILDIPAKVGLERAQKRAAAD---APDRFEKERLETHEKRREAFLDIAA 191 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH+V++ S +++A IL IV +L+ Sbjct: 192 REPERCHVVNAMQSEEAIAAEILAIVQQLL 221 >gi|116252223|ref|YP_768061.1| thymidylate kinase [Rhizobium leguminosarum bv. viciae 3841] gi|115256871|emb|CAK07965.1| putative thymidylate kinase (ec 2.7.4.9) (dtmp kinase) [Rhizobium leguminosarum bv. viciae 3841] Length = 226 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 109/210 (51%), Positives = 150/210 (71%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEG EGAGK+T I L L+ + +DV +TREPGG+P AEA RHVLLS + F Sbjct: 5 TGLFVTFEGGEGAGKSTQIRRLAEALKGEGHDVLMTREPGGSPGAEAVRHVLLSGAAEAF 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE VIRPAL GK++LCDRF+DSS YQG + + F+++LQ Sbjct: 65 GTRMEAILFAAARNDHVEEVIRPALAAGKVVLCDRFMDSSRVYQGITGNLEPDFIETLQR 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ VMPDCT+ILD+P +GL+R Q R + D FE++ + HEKRR+ FLDIA Sbjct: 125 IAINGVMPDCTVILDIPAKVGLERAQKRAAAD---APDRFEKERLETHEKRREAFLDIAA 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH+V++ + +++A IL IV +L+ Sbjct: 182 REPERCHVVNAMQTEEAIAAEILAIVKQLL 211 >gi|117929178|ref|YP_873729.1| thymidylate kinase [Acidothermus cellulolyticus 11B] gi|117649641|gb|ABK53743.1| thymidylate kinase [Acidothermus cellulolyticus 11B] Length = 688 Score = 277 bits (709), Expect = 1e-72, Method: Composition-based stats. Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 7/222 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++FEG EGAGK+T + LL R+L + Y+V V+REPGGTP R +LL Sbjct: 464 TGFFVAFEGGEGAGKSTQVELLARYLADRGYEVVVSREPGGTPLGHRLREILLDPREPAP 523 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV VIRPAL G I++ DR++DSS AYQG ++ L Sbjct: 524 SPRAEALLYAADRAEHVAKVIRPALARGAIVISDRYVDSSLAYQGGGRDLSPRDVEQLSR 583 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD+P D GL R R D + +D HE+ R +F A Sbjct: 584 FATSGLRPDLTVLLDVPPDEGLARTGRRD-----RAPDRLQAEDAAFHERVRNVFRQRAE 638 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 P+R ++D+ S + ++ + ++ P + +D Sbjct: 639 ADPERYLVIDARLSAADIHRLVVQRILPVLP--FPPKRAPRD 678 >gi|296271416|ref|YP_003654048.1| thymidylate kinase [Thermobispora bispora DSM 43833] gi|296094203|gb|ADG90155.1| thymidylate kinase [Thermobispora bispora DSM 43833] Length = 686 Score = 276 bits (708), Expect = 1e-72, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+FEG EG+GKTT +L +L+ + YDV TREPGGT R +LL Sbjct: 464 RRGLFIAFEGGEGSGKTTQARMLAIWLRDQGYDVVQTREPGGTKLGMRLRAILLDSAHQG 523 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +EA+++AA R +HVE VIRPAL G ++ DR++DSS AYQG + + Sbjct: 524 ISGRSEALLYAADRAEHVEKVIRPALRRGSAVISDRYVDSSLAYQGAGRMLDRDEVARIN 583 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++PD T++LD+P +GL+R+ + D E + + HE+ R+ +A Sbjct: 584 EWATGGLVPDLTVVLDVPPAVGLRRM--------GSPADRLEAEPLEFHERVRRELRALA 635 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +VD + V I + V E++ Sbjct: 636 AAEPERYLVVDGTLPQEEVTRIIQDRVREIL 666 >gi|209549399|ref|YP_002281316.1| thymidylate kinase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535155|gb|ACI55090.1| dTMP kinase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 226 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 112/210 (53%), Positives = 149/210 (70%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEG EGAGK+T I L L+ +DV VTREPGG+P AEA RHVLLS + F Sbjct: 5 TGLFVTFEGGEGAGKSTQIRRLAEALKGDGHDVLVTREPGGSPGAEAVRHVLLSGAAEAF 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + Q F+++LQ Sbjct: 65 GTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGVTGNLQPDFIETLQR 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ VMPDCT+ILD+P IGL+R Q R + D FE++ + HEKRR+ FLDIA Sbjct: 125 IAINGVMPDCTVILDIPAKIGLERAQKRAATD---APDRFEKERLETHEKRREAFLDIAA 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH++++ S +++A I+ IV +L+ Sbjct: 182 REPERCHVINAMQSEEAIAAEIVAIVRQLM 211 >gi|238062269|ref|ZP_04606978.1| dTMP kinase [Micromonospora sp. ATCC 39149] gi|237884080|gb|EEP72908.1| dTMP kinase [Micromonospora sp. ATCC 39149] Length = 698 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SGLF+ FEG EGAGK+T ++ L L+ + +V VTREPG T R +LL + Sbjct: 458 SSGLFVVFEGGEGAGKSTQLAALAEQLRGQGREVVVTREPGATEVGARIRALLLDATAEG 517 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R HV V+RPAL G +++ DR++DSS AYQG + + L Sbjct: 518 PSPRAEALLYAADRAHHVATVVRPALARGAVVISDRYVDSSLAYQGAGRTLPVDEVSWLS 577 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD ++LD+ GL RV R S D E + V HE+ R FLD+A Sbjct: 578 SWATGGLKPDLVVLLDVDPHTGLSRVAAR-----SEGTDRLEAESVAFHERVRYAFLDLA 632 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 N P R ++D++ + A + V E + Sbjct: 633 ANDPKRYLVLDASRPVEETAALVARRVKEFL 663 >gi|118580087|ref|YP_901337.1| dTMP kinase [Pelobacter propionicus DSM 2379] gi|166223097|sp|A1APK9|KTHY_PELPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118502797|gb|ABK99279.1| thymidylate kinase [Pelobacter propionicus DSM 2379] Length = 219 Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats. Identities = 79/217 (36%), Positives = 122/217 (56%), Gaps = 3/217 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG+GKTT I LL L+ Y V +TREPGG ++ R +LL Sbjct: 2 GYFITFEGIEGSGKTTQIGLLGEQLESLGYSVVMTREPGGCAISDKIRSILLDADNSSIS 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR HV VI PAL +G I+LCDRF D++ AYQG +D+L ++ Sbjct: 62 PMTELLLYAAARAQHVSEVIIPALKQGNIVLCDRFSDATLAYQGSGRGIAREKVDTLNQL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q + PD T+++D V +GL+R + R + FE + + H R+ +L++A Sbjct: 122 ACQSLRPDLTVLIDCDVSVGLERARRRIETASGPREERFELEALEFHRSVREAYLELAHA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 +P R VD + + ++ I V +++Q R++ S Sbjct: 182 EPQRFITVDGSGGVEEISEAI---VAQVLQNRLNNTS 215 >gi|190891837|ref|YP_001978379.1| thymidylate kinase protein [Rhizobium etli CIAT 652] gi|190697116|gb|ACE91201.1| thymidylate kinase protein [Rhizobium etli CIAT 652] Length = 236 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 109/209 (52%), Positives = 150/209 (71%), Gaps = 3/209 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHVLLS + F Sbjct: 15 TGLFVTFEGGEGAGKSTQIRRLAETLKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAF 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + + F+++LQ Sbjct: 75 GTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQR 134 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ V+PDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 135 IAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAA 191 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+RCH+V++ + +++A IL IV +L Sbjct: 192 REPERCHVVNAMQTEEAIAAEILAIVKQL 220 >gi|39997327|ref|NP_953278.1| thymidylate kinase [Geobacter sulfurreducens PCA] gi|59798354|sp|Q74AX0|KTHY_GEOSL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|39984218|gb|AAR35605.1| thymidylate kinase [Geobacter sulfurreducens PCA] gi|298506264|gb|ADI84987.1| thymidylate kinase [Geobacter sulfurreducens KN400] Length = 213 Score = 275 bits (705), Expect = 3e-72, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 123/212 (58%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT I + L+ + V VTREPGG P A+ R +LL G Sbjct: 2 GYFITFEGIEGCGKTTQIKRAAQSLREAGHRVVVTREPGGCPIADDIRAILLDAGNSAMV 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR HV VI PAL EG ++LCDRF DS+ YQG + + L + Sbjct: 62 PTTELLLYAAARAQHVAEVIAPALAEGAVVLCDRFTDSTLVYQGFGRNLDRDLIARLNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ PD TI+LD PV +GL R R + R++ + FER+ ++ HE+ R+ FL +A Sbjct: 122 AAGQIRPDLTILLDCPVAVGLARAAARINSRQTNREERFERESLLFHERVREGFLSLAGG 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P R ++D ++ AT + +++ V +R Sbjct: 182 EPHRFAVIDGNDGVEATATAVADVLLNRVPRR 213 >gi|307312732|ref|ZP_07592363.1| thymidylate kinase [Sinorhizobium meliloti BL225C] gi|307317216|ref|ZP_07596657.1| thymidylate kinase [Sinorhizobium meliloti AK83] gi|306897304|gb|EFN28049.1| thymidylate kinase [Sinorhizobium meliloti AK83] gi|306899457|gb|EFN30089.1| thymidylate kinase [Sinorhizobium meliloti BL225C] Length = 234 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 106/224 (47%), Positives = 145/224 (64%), Gaps = 3/224 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EGAGK+T + LL L + Y V TREPGG+ AEA RHVLLS + Sbjct: 11 LAKGFFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS YQG + + F+++L Sbjct: 71 SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++V V+PDCTII DLP +GL+R + R + + D FE++ + HEKRR+ FLDI Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 A P+RC +VD+ ++A +L++V L+ P S + Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231 >gi|330465259|ref|YP_004403002.1| thymidylate kinase [Verrucosispora maris AB-18-032] gi|328808230|gb|AEB42402.1| thymidylate kinase [Verrucosispora maris AB-18-032] Length = 753 Score = 275 bits (704), Expect = 4e-72, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 7/213 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLF+ FEG EGAGK+T ++ L L+ + DV VTREPG T R ++L D+ Sbjct: 513 SAGLFVVFEGGEGAGKSTQLAQLAERLRAEGRDVVVTREPGATGVGTRIRSLVLDNNTDD 572 Query: 62 --FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 AEA+++AA R HV V+RPAL G +++ DR++DSS AYQG + L Sbjct: 573 EAPSPRAEALLYAADRAHHVATVVRPALSRGAVVISDRYVDSSLAYQGAGRTLPVDELSW 632 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD ++LD+ GL RV R S D E + + HE+ R FLD Sbjct: 633 LSSWATGGLKPDLVVLLDIDPRAGLSRVAER-----SRAADRLEAESLAFHERVRYAFLD 687 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A P R ++D+ H + +A + + V EL+ Sbjct: 688 LAAADPKRYLVLDAGHPVEQIAERVADRVTELL 720 >gi|291296874|ref|YP_003508272.1| thymidylate kinase [Meiothermus ruber DSM 1279] gi|290471833|gb|ADD29252.1| thymidylate kinase [Meiothermus ruber DSM 1279] Length = 205 Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 127/210 (60%), Gaps = 11/210 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+FEG EGAGK+T LL +L+ K +V +TREPGGT +A R +LL D Sbjct: 2 KGLFITFEGPEGAGKSTQARLLAEWLRAKGREVVLTREPGGTRLGQAIRGLLLHQ--DPM 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEAE ++++A R +H++ VI+PAL G I+LCDR+LDSS AYQG +L ++ + Sbjct: 60 CAEAEYLLYSADRAEHMQRVIQPALGLGHIVLCDRWLDSSLAYQGYGRGLDLGWLRAVAQ 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + Q + P T + DLP ++GL+R + R D ER+ + H + RQ +L++A+ Sbjct: 120 GATQGIRPHKTFLFDLPPEVGLERFEGR---------DRLEREPLEFHRRVRQGYLELAQ 170 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R ++D+ +++ T + + L+ Sbjct: 171 AEPERFVLLDATQPLEALHTQLRGYLESLL 200 >gi|86357778|ref|YP_469670.1| thymidylate kinase protein [Rhizobium etli CFN 42] gi|86281880|gb|ABC90943.1| thymidylate kinase protein [Rhizobium etli CFN 42] Length = 236 Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 108/209 (51%), Positives = 148/209 (70%), Gaps = 3/209 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHVLLS + F Sbjct: 15 TGLFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAF 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + F+++LQ Sbjct: 75 GTRMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLDPDFIETLQR 134 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ V+PDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA Sbjct: 135 IAINGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAA 191 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+RC +V++ + +++A IL IV +L Sbjct: 192 REPERCRVVNAMQTEEAIAAEILAIVKQL 220 >gi|296131635|ref|YP_003638882.1| thymidylate kinase [Thermincola sp. JR] gi|296030213|gb|ADG80981.1| thymidylate kinase [Thermincola potens JR] Length = 211 Score = 274 bits (703), Expect = 4e-72, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 115/206 (55%), Gaps = 1/206 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG +GAGKTT + + LQ K Y+V +TREPGGT E+ R +LL Sbjct: 2 TGKFITFEGPDGAGKTTQMKRAAQALQEKGYEVILTREPGGTEIGESIRSILLDPQN-RM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR HVE +I PAL GK++LCDRF DS+ AYQG L+ + Sbjct: 61 SHRTEALLYAAARAQHVEELILPALQAGKVVLCDRFADSTLAYQGYGRGINLNLLNIVNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ + PD TIILDL +GL R++N+ D E + V H++ R+ FL IA Sbjct: 121 LAIGSLKPDLTIILDLDPQVGLNRIRNKRLAVAGETEDRIEMEKVEFHQRVREGFLSIAL 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R I+ + V ++ + Sbjct: 181 QDPGRYKIIAAGMDEDKVFEKVMACI 206 >gi|158423797|ref|YP_001525089.1| thymidylate kinase [Azorhizobium caulinodans ORS 571] gi|158330686|dbj|BAF88171.1| thymidylate kinase [Azorhizobium caulinodans ORS 571] Length = 235 Score = 274 bits (703), Expect = 5e-72, Method: Composition-based stats. Identities = 94/220 (42%), Positives = 131/220 (59%), Gaps = 5/220 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG EG GK+T L LQ+ +V +TREPGG+ AEA RHVLLS +F Sbjct: 5 RGRFITLEGGEGTGKSTQARRLAAALQKGGLEVVLTREPGGSAGAEAVRHVLLSGAAKDF 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G + EA++FAAAR DHV+++IRPAL GK ++CDRF+DS+ YQG + LDSL+ Sbjct: 65 GPQGEALLFAAARADHVDSLIRPALAAGKWVICDRFIDSTRVYQGAVGAVPGALLDSLEW 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ E PD T++LD+P ++GL R R D FE + + H + R FL +A+ Sbjct: 125 VAAAEARPDLTLVLDVPPEVGLSRAAGR-----GEGADRFESEGLAFHTRVRDAFLALAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 P RC IVD++ VA + + V E + PLS+K Sbjct: 180 ADPARCVIVDASGGPDDVAALVWSSVRERLVPPERPLSAK 219 >gi|114320572|ref|YP_742255.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1] gi|122311744|sp|Q0A8S2|KTHY_ALHEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|114226966|gb|ABI56765.1| thymidylate kinase [Alkalilimnicola ehrlichii MLHE-1] Length = 217 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 119/222 (53%), Gaps = 5/222 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG+EGAGK+T ++ ++ +LQR+ D +TREPGGTP E R +LL Sbjct: 1 MTRGRFITLEGLEGAGKSTALTRVREYLQRQGIDAVMTREPGGTPLGERIRALLLGQSEP 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++ AAR +H++ I PAL G+ ++CDRF D+SYAYQG + +L Sbjct: 61 PMAPATEALLMFAARSEHLDKRIWPALERGQWVVCDRFTDASYAYQGWGRGLGAERIAAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + + PD T+ LD+PV+ GL R R D FE++ E+ + + + Sbjct: 121 EDWTQGALRPDLTLWLDVPVETGLARAAGR-----GEAPDRFEQERDGFFERVHEGYAAL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 A P+R VD+ ++V T + + V + +S + Sbjct: 176 AERFPERIRRVDAGQPLEAVLTALEEALASAVTRWLSGTEAH 217 >gi|220934998|ref|YP_002513897.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7] gi|219996308|gb|ACL72910.1| dTMP kinase [Thioalkalivibrio sp. HL-EbGR7] Length = 218 Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG EG GK+T I L+ FL+ + + VTREPGGTP AE R +LLS Sbjct: 8 RGRFITLEGAEGVGKSTQIQALQAFLESRGVPLLVTREPGGTPLAERIRELLLSRDHPPM 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR +H+ I PAL G +LCDRF D++YAYQG + L++ Sbjct: 68 HPDTELLLMFAARAEHLRTRILPALEAGTWVLCDRFTDATYAYQGGGRGLDPARIAVLED 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V PD T++LD+ V GL R + R D FE++ + E+ R+ +L AR Sbjct: 128 WVQGPVRPDLTLLLDVDVRTGLARARGR------GEADRFEQEAMDFFERVREAYLARAR 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R I+D+ S ++V ++ + L+Q Sbjct: 182 AEPSRYRIIDAGQSLEAVTRDLQAALVSLLQ 212 >gi|15965357|ref|NP_385710.1| putative thymidylate kinase, dTMP kinase protein [Sinorhizobium meliloti 1021] gi|23821796|sp|Q92PW7|KTHY_RHIME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|15074537|emb|CAC46183.1| Putative thymidylate kinase, dTMP kinase [Sinorhizobium meliloti 1021] Length = 234 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 105/224 (46%), Positives = 144/224 (64%), Gaps = 3/224 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T + LL L + Y V TREPGG+ AEA RHVLLS + Sbjct: 11 LAKGFFITFEGGEGTGKSTQMRLLAEALSARGYRVLTTREPGGSVGAEAVRHVLLSGAAE 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS YQG + + F+++L Sbjct: 71 SFGVRMEAILFAAARSDHVEEVIRPALEQGTIVLCDRFMDSSRVYQGVTGNLEPAFVETL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++V V+PDCTII DLP +GL+R + R + + D FE++ + HEKRR+ FLDI Sbjct: 131 ERVAVNGVIPDCTIIFDLPASVGLERARRRAA---NDSPDRFEKEQLETHEKRREAFLDI 187 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 A P+RC +VD+ ++A +L++V L+ P S + Sbjct: 188 AAADPERCRVVDANRPPTAIAAEVLSLVEALLPLEGKPQPSNAE 231 >gi|218682276|ref|ZP_03529877.1| thymidylate kinase [Rhizobium etli CIAT 894] Length = 226 Score = 273 bits (698), Expect = 2e-71, Method: Composition-based stats. Identities = 110/210 (52%), Positives = 147/210 (70%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEG EGAGK+T I L L+ + DV +TREPGG+P AEA RHVLLS + + Sbjct: 5 TGLFVTFEGGEGAGKSTQIRRLAAALKGEGQDVLMTREPGGSPGAEAVRHVLLSGAAEAY 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG S F+++LQ Sbjct: 65 GTRMEAILFAAARNDHVEEVIRPALTAGKIVLCDRFMDSSRVYQGITGSLDPDFIETLQR 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ V PDCT+ILD+P IGL+R Q R + D FE++ + HEKRR+ FLDIA Sbjct: 125 VAINGVTPDCTVILDIPAKIGLERAQKRAAAD---APDRFEKERLETHEKRREAFLDIAA 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RCH+V++ S +++A IL IV +L+ Sbjct: 182 REPERCHVVNAMQSEEAIAAEILAIVKQLL 211 >gi|295689513|ref|YP_003593206.1| thymidylate kinase [Caulobacter segnis ATCC 21756] gi|295431416|gb|ADG10588.1| thymidylate kinase [Caulobacter segnis ATCC 21756] Length = 208 Score = 272 bits (697), Expect = 3e-71, Method: Composition-based stats. Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEG EGAGK+T I L LQ +DV VTREPGG+P AEA R +L++ D Sbjct: 1 MTQGFFISFEGGEGAGKSTQIRRLAERLQAAGHDVVVTREPGGSPGAEAIRELLVNGAAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR DHVE VIRPAL G ++LCDRF DS+ AYQG + + SL Sbjct: 61 RWSPVTETLLMYAARRDHVERVIRPALARGAVVLCDRFADSTRAYQGAGGDAPASLIASL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + +PD T+ILDLP +IGL+R + R FE K + HE+ R +L+I Sbjct: 121 EDHVLSGTVPDLTLILDLPAEIGLERAEARGGAA------RFESKGLAFHERLRAGYLEI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 AR +P+RC ++++ +V I V + +++ Sbjct: 175 ARREPERCVVIEANADIDAVTAAISRTVDQRLER 208 >gi|158521178|ref|YP_001529048.1| dTMP kinase [Desulfococcus oleovorans Hxd3] gi|229500940|sp|A8ZXL3|KTHY_DESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|158510004|gb|ABW66971.1| dTMP kinase [Desulfococcus oleovorans Hxd3] Length = 214 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 1/208 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEGAGKTT + L FL++ + VTREPGGT + R +LL + Sbjct: 1 MFITLEGIEGAGKTTQLPRLVDFLEQHGHTCVVTREPGGTGMGQKIRSLLLDPDNSDMSP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++AA R HV +I PAL EGK ++CDRF D++ YQG + L ++ Sbjct: 61 ETELFLYAADRAQHVRRLIEPALAEGKTVVCDRFADATEVYQGWARGLDMELVQVLNRVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 PD T++ DLP + GLKR R + D FE + + HE+ R +LD+AR Sbjct: 121 TGGRKPDITLLFDLPPEAGLKRAWQRIARNGKEAADCRFENEKMAFHERVRHGYLDLARR 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+R ++D+ VA ++ + + Sbjct: 181 EPERFVVIDALGPAAEVAGRMIAALERV 208 >gi|258510140|ref|YP_003183574.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257476866|gb|ACV57185.1| thymidylate kinase [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 213 Score = 272 bits (696), Expect = 3e-71, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 3/216 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I+FEGI+GAGKTT + L +L+ + V VTREPGGT +A R +LL Sbjct: 1 MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HVE +IRPAL G+I+LCDRF+D+S AYQG ++++L Sbjct: 61 EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + PD T+ DL R++ R E LD ER+D E+ F + Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARA---EGGGLDRIERRDEAFFERVADAFERL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R P+ +D+A S + I +VW L+Q+ + Sbjct: 178 WRAAPEVRKRIDAARSPDDIEQEIRALVWNLIQQHL 213 >gi|218960693|ref|YP_001740468.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans] gi|167729350|emb|CAO80261.1| thymidylate kinase [Candidatus Cloacamonas acidaminovorans] Length = 217 Score = 271 bits (695), Expect = 3e-71, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 7/213 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+FEGIEG+GKTT I +L L+ K TREPGGT +EA R +LL+ E Sbjct: 12 SKGLFITFEGIEGSGKTTQIIMLVEVLKAKGIPYVTTREPGGTKISEAIRDLLLNPKFME 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +++ A+R H +I PAL EGKI++ DR+ DS+YAYQG ++ L Sbjct: 72 MKPETELLLYCASRAQHTAELILPALEEGKIVISDRYFDSTYAYQGAARELDEEVINVLT 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 S PD T +LDLPV++GL R++NR LD E++ + HEK R+ FL IA Sbjct: 132 RFSTYGRNPDLTFLLDLPVEVGLARIKNRN-------LDRLEQETLSFHEKVRRQFLSIA 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D + + IL+ + + + Sbjct: 185 NKYPSRYIVLDGESQAEIIHRQILSTLQPFIGE 217 >gi|197105068|ref|YP_002130445.1| thymidylate kinase [Phenylobacterium zucineum HLK1] gi|196478488|gb|ACG78016.1| thymidylate kinase [Phenylobacterium zucineum HLK1] Length = 211 Score = 271 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T + L L+ + +V TREPGG+ AE+ R ++L+ D Sbjct: 1 MARGRFITFEGGEGAGKSTQVKRLAARLEAQGLEVVTTREPGGSAGAESIRALVLNGEAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR DH+E VIRPAL G ++CDRF DS+ AYQG + + +L Sbjct: 61 RWSPVTETLLMYAARRDHIERVIRPALARGAWVICDRFADSTRAYQGAAGGTDPALIAAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++V PD T++ DLP ++GL+R R FE K + H++ R+ F I Sbjct: 121 EAHILEDVRPDLTLVFDLPPEVGLERAHARAGAEM-----RFESKGMAFHQRLREGFRAI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +P RC ++D+ +V + V E + Sbjct: 176 AAAEPQRCAVIDATAPMDAVEGAVWTAVSERL 207 >gi|189425005|ref|YP_001952182.1| dTMP kinase [Geobacter lovleyi SZ] gi|254808293|sp|B3E2K5|KTHY_GEOLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189421264|gb|ACD95662.1| dTMP kinase [Geobacter lovleyi SZ] Length = 212 Score = 271 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 78/208 (37%), Positives = 116/208 (55%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T I+LL LQ+ V +TREPGG P A+ R VLL Sbjct: 1 MFITFEGIEGCGKSTQIALLAASLQQAGQRVLLTREPGGCPIADQIRSVLLDAANTALVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++AA+R H+ V+ PAL EG I+LCDRF D++ AYQ +++L ++ Sbjct: 61 MAELMLYAASRAQHLAEVVSPALAEGVIVLCDRFSDATRAYQSFGRGIDRQVIETLNSLA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T++LD PV+ GL R + R + FE + + H++ R +L +A + Sbjct: 121 CDGISPDLTVLLDCPVETGLGRARQRIDSTSGPREERFELESLAFHQRVRDGYLQLAAEE 180 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P R IVD+ VA+ I + V + Sbjct: 181 PGRFVIVDATVQPAQVASAISDAVLSRL 208 >gi|218289082|ref|ZP_03493319.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1] gi|218240907|gb|EED08085.1| dTMP kinase [Alicyclobacillus acidocaldarius LAA1] Length = 213 Score = 271 bits (695), Expect = 4e-71, Method: Composition-based stats. Identities = 83/216 (38%), Positives = 121/216 (56%), Gaps = 3/216 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I+FEGI+GAGKTT + L +L+ + V VTREPGGT +A R +LL Sbjct: 1 MRKGLLITFEGIDGAGKTTQLLRLAAWLEAQGLPVIVTREPGGTRIGDAVRAILLDPRHQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HVE +IRPAL G+I+LCDRF+D+S AYQG ++++L Sbjct: 61 EMAPRTEALLYAASRAQHVEELIRPALARGEIVLCDRFVDASIAYQGAGLGLGEAWVEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + PD T+ DL R++ R E LD ER+D E+ F + Sbjct: 121 NEYALGGLRPDLTLWFDLDWPTARSRLRARV---EGGGLDRIERRDEAFFERVADAFERL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R P+ +D+A S + I +VW L+Q+ + Sbjct: 178 WRAMPEVRKRIDAARSPDDIEQEIRALVWNLIQQHL 213 >gi|145596534|ref|YP_001160831.1| thymidylate kinase [Salinispora tropica CNB-440] gi|145305871|gb|ABP56453.1| thymidylate kinase [Salinispora tropica CNB-440] Length = 705 Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 117/217 (53%), Gaps = 6/217 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVD 60 ++GLF+ FEG EGAGK+T ++LL L+ + DV VTREPG T E R +LL G + Sbjct: 446 SAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGVGERIRSLLLGQPGSE 505 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA R HV V+RPAL G ++ DR++DSS AYQG + + L Sbjct: 506 VPSPRAEALLYAADRAHHVATVVRPALARGAVVTSDRYVDSSLAYQGVGRTLPVDEVSWL 565 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD ++LD+ + GL RV R D+ E + V HE+ R FLD+ Sbjct: 566 SSWATGGLKPDLVVLLDIDPNTGLSRVAAR-----GGVSDHLEAESVSFHERVRYAFLDL 620 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A P R ++D+A +A + V EL+ + Sbjct: 621 AAADPRRYLVLDAARPTDEIADEVARRVAELLGAQAG 657 >gi|229917431|ref|YP_002886077.1| thymidylate kinase [Exiguobacterium sp. AT1b] gi|259494270|sp|C4KZW9|KTHY_EXISA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229468860|gb|ACQ70632.1| thymidylate kinase [Exiguobacterium sp. AT1b] Length = 212 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+ EG +G+GK+T + LL L++K YD+ VTREPGGT R VLLS E Sbjct: 2 SGMFITVEGPDGSGKSTQLQLLVENLKQKGYDIVVTREPGGTTVGNQIREVLLSPDHHEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++AA+R +VE VIRPAL G I+LCDRF+D+S AYQG + SL E Sbjct: 62 TPRVEMMLYAASRAQNVEQVIRPALERGAIVLCDRFIDASIAYQGYGLQYDLDQIRSLNE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T + DL + R+++R LD E +D HE+ F + + Sbjct: 122 WATNGLTPDLTFLFDLNPERASARMKDR------GQLDRIESRDQAFHERVYAGFQTLLK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R +D+ S + + +L+ E +Q+ Sbjct: 176 QYPERIVRIDADQSIECIQDEVLDYTIERLQQ 207 >gi|159039919|ref|YP_001539172.1| dTMP kinase [Salinispora arenicola CNS-205] gi|157918754|gb|ABW00182.1| dTMP kinase [Salinispora arenicola CNS-205] Length = 703 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 6/212 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVD 60 ++GLF+ FEG EGAGK+T ++LL L+ + DV VTREPG T E R +LL G + Sbjct: 446 SAGLFVVFEGGEGAGKSTQLALLAARLRDQGRDVVVTREPGATGIGERIRSLLLGQPGSE 505 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA R HV V+RPAL G +++ DR++DSS AYQG + + L Sbjct: 506 VPSPRAEALLYAADRAHHVATVVRPALARGAVVVSDRYIDSSLAYQGAGRTLPVDEVSWL 565 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD ++LD+ GL RV R S D+ E + V HE+ R FLD+ Sbjct: 566 SSWATGGLKPDLVVLLDIDPHTGLSRVAVR-----SGATDHLEAESVSFHERVRYAFLDL 620 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P ++D+A +A + + EL+ Sbjct: 621 AATDPKHYLVLDAARPADEIADEVARRITELL 652 >gi|110633933|ref|YP_674141.1| thymidylate kinase [Mesorhizobium sp. BNC1] gi|123162339|sp|Q11HZ9|KTHY_MESSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110284917|gb|ABG62976.1| thymidylate kinase [Chelativorans sp. BNC1] Length = 225 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 105/215 (48%), Positives = 142/215 (66%), Gaps = 3/215 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T I LL L+R+ DV TREPGG+P AEA RHVLLS + F Sbjct: 4 RGFFITFEGGEGAGKSTQIHLLADRLRREGRDVLTTREPGGSPGAEAIRHVLLSGAAEPF 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA EAI+FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+ +L+ Sbjct: 64 GATLEAILFAAARSDHVEQVIRPAVESGAIVLCDRFLDSSRVYQGVTGGLASDFMAALER 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V ++PD T+ILD+ + GL+R R R A D FE++++ IH +RR+ FL+IA Sbjct: 124 VTVNGLIPDLTVILDIDPEEGLRRASER---RGKATADRFEKENLEIHRRRREAFLNIAA 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P RC ++D++ S +V+ N+ IV ++ R Sbjct: 181 REPQRCVVIDASRSADAVSENVTEIVLRVIFDRAG 215 >gi|330502601|ref|YP_004379470.1| thymidylate kinase [Pseudomonas mendocina NK-01] gi|328916887|gb|AEB57718.1| thymidylate kinase [Pseudomonas mendocina NK-01] Length = 210 Score = 271 bits (694), Expect = 5e-71, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLRERGIDVLLTREPGGTPLAERIRELLLEPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H++ VIRPAL G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLQQVIRPALANGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T+I DLPV+IGL R R LD FE++ E RQ +L A Sbjct: 122 FVQGELRPDLTLIFDLPVEIGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R ++D+ + V +I ++ L++ Sbjct: 176 QAPQRYRVLDAGQTLAQVQADIDALLPSLLE 206 >gi|120602139|ref|YP_966539.1| dTMP kinase [Desulfovibrio vulgaris DP4] gi|166221739|sp|A1VCE6|KTHY_DESVV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120562368|gb|ABM28112.1| thymidylate kinase [Desulfovibrio vulgaris DP4] Length = 224 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 112/209 (53%), Gaps = 1/209 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T + L +LQ+ + V VTREPGG+ R +LL G + Sbjct: 1 MFITFEGIEGSGKSTALQGLAAWLQQHGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV V+RPAL EG ++L DR+ DS+ YQG + L +++ Sbjct: 61 EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V + PD TI+LDL + GL R R + FE + + H + R+ +L A Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALARNIREGMHAAEGRFEAESLAFHTRVREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +VD+ S + V +++ IV + Sbjct: 181 HGGRYRVVDATQSPEDVVRDVVGIVAAAL 209 >gi|315501244|ref|YP_004080131.1| thymidylate kinase [Micromonospora sp. L5] gi|315407863|gb|ADU05980.1| thymidylate kinase [Micromonospora sp. L5] Length = 717 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-D 60 +SGLF+ FEG EGAGK+T ++ L L+ + DV VTREPG TP + R ++L + Sbjct: 475 SSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGKRIRSLVLGTNPGE 534 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA R HV V+RPAL+ G +++ DR++DSS AYQG + + L Sbjct: 535 APSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQGAGRTLPVDEVSWL 594 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD ++LD+ GL RV++R + D E + + HE+ R FLD+ Sbjct: 595 SSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----NEGTDRLEAESLTFHERVRYAFLDL 649 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P R ++D++ A + V EL+ Sbjct: 650 AAGDPKRYLVLDASRPIDETADAVARRVGELL 681 >gi|144899825|emb|CAM76689.1| Thymidylate kinase [Magnetospirillum gryphiswaldense MSR-1] Length = 211 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T + LL L+ + +V +TREPGG AEA R +L+S VD Sbjct: 1 MTDGRFITFEGGEGAGKSTQVRLLAESLRGRKREVVLTREPGGADGAEAIRTLLVSGAVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A EA++ +AAR DH+ + PAL G ++CDRF DS+ AYQG + L Sbjct: 61 RWDARTEALLHSAARRDHLVRTVWPALERGAWVICDRFADSTLAYQGYGHGLDRALIGQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E+++ PD T+ILDLPV+ GLKR R D +ER + H++ RQ FL I Sbjct: 121 AEVTMGRFRPDLTLILDLPVEEGLKRAGGR-----GGAEDRYERMGLDFHQRLRQGFLAI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +P RC ++D+ S ++V +IL V + Sbjct: 176 ASAEPRRCAVIDATRSPEAVHQDILAAVTTRL 207 >gi|72163182|ref|YP_290839.1| thymidylate kinase [Thermobifida fusca YX] gi|71916914|gb|AAZ56816.1| thymidylate kinase [Thermobifida fusca YX] Length = 686 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 118/210 (56%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF+ EG EG+GK+T + + +L+ + +DV TREPG T R +LL + Sbjct: 464 GGLFVVLEGGEGSGKSTQVREIAVWLRDEGFDVLTTREPGATKLGMRLRTMLLDKANEGM 523 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA R +HV+ VIRPAL G I++ DR++DS+ AYQG + ++ Sbjct: 524 AARTEALLYAADRAEHVDKVIRPALERGAIVISDRYVDSTLAYQGAGRELDPDDVATINN 583 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD TI+LD+P + GL+R +R + D E +++ HE+ R+ FL++A Sbjct: 584 WATGRLVPDLTILLDIPAEEGLRRHADRPA-------DRLESENLEFHERVRRCFLELAD 636 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR ++D+ + + I + ++ Sbjct: 637 RAPDRYLVLDAREPQEEITKAIRRHLRRIL 666 >gi|302864959|ref|YP_003833596.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] gi|302567818|gb|ADL44020.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] Length = 718 Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 117/214 (54%), Gaps = 6/214 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVD 60 +SGLF+ FEG EGAGK+T ++ L L+ + DV VTREPG TP E R ++L + Sbjct: 476 SSGLFVVFEGGEGAGKSTQLAELAERLRAQGRDVVVTREPGATPVGERIRSLVLGTTPGE 535 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA R HV V+RPAL+ G +++ DR++DSS AYQG + + L Sbjct: 536 APSPRAEALLYAADRAHHVATVVRPALVRGAVVISDRYVDSSLAYQGAGRTLPVDEVSWL 595 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD ++LD+ GL RV++R + D E + + HE+ R FLD+ Sbjct: 596 SSWATGGLKPDLVVLLDVEPRTGLSRVEDR-----AEGTDRLEAESLTFHERVRYAFLDL 650 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A P R ++D++ A + V EL+ Sbjct: 651 AAGDPKRYLVLDASRPIDETADAVARRVGELLAD 684 >gi|297566850|ref|YP_003685822.1| thymidylate kinase [Meiothermus silvanus DSM 9946] gi|296851299|gb|ADH64314.1| thymidylate kinase [Meiothermus silvanus DSM 9946] Length = 202 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 121/212 (57%), Gaps = 12/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 SG FI+FEG EGAGK+T + LL +L+ + +V +TREPG G R ++L + Sbjct: 2 SGWFITFEGPEGAGKSTQVKLLAPWLEAQGREVVLTREPGNGGWLGVEVRRLVL--LSEP 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EAE ++++A R +HV VI PAL GK++LCDR+LDSS AYQG +L ++ Sbjct: 60 MSPEAEYLLYSADRAEHVRRVIAPALAAGKVVLCDRYLDSSLAYQGYGRGLDLGWLRAVA 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 Q + P T +LDLP ++GL R R D ER+ + H++ R +L++A Sbjct: 120 VGVTQGLKPHRTFLLDLPPEVGLARFAGR---------DRLEREPLEFHQRVRAGYLELA 170 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +P R ++D+ S +++ + + + L++ Sbjct: 171 KAEPQRFVVLDATQSPEAIQAELRSHLSTLLR 202 >gi|46580545|ref|YP_011353.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough] gi|59798319|sp|Q72A57|KTHY_DESVH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46449964|gb|AAS96613.1| thymidylate kinase [Desulfovibrio vulgaris str. Hildenborough] gi|311234283|gb|ADP87137.1| thymidylate kinase [Desulfovibrio vulgaris RCH1] Length = 224 Score = 271 bits (693), Expect = 7e-71, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T + L +LQ++ + V VTREPGG+ R +LL G + Sbjct: 1 MFITFEGIEGSGKSTALQGLAAWLQQRGHGVAVTREPGGSRLGRTLRSILLDLGNTDITP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV V+RPAL EG ++L DR+ DS+ YQG + L +++ Sbjct: 61 EAELFLYLADRAQHVAQVVRPALDEGMVVLSDRYADSTVVYQGYGRGLDPMMLRQFNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V + PD TI+LDL + GL R R + FE + + H + R+ +L A Sbjct: 121 VGGLWPDLTILLDLEPEAGLNRALARNIREGMHAAEGRFEAESLAFHTRVREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +VD+ S + V +++ IV + Sbjct: 181 HGGRYRVVDATQSPEDVVRDVVGIVAAAL 209 >gi|146306664|ref|YP_001187129.1| thymidylate kinase [Pseudomonas mendocina ymp] gi|166223105|sp|A4XST1|KTHY_PSEMY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145574865|gb|ABP84397.1| thymidylate kinase [Pseudomonas mendocina ymp] Length = 210 Score = 270 bits (692), Expect = 7e-71, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 119/211 (56%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLREQGVDVVLTREPGGTPLAERIRELLLDPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H++ VIRPAL +G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLQQVIRPALAKGCVVLCDRFTDATYAYQGGGRGLSIERIAQLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T+I DLPV++GL R R LD FE++ E RQ +L A Sbjct: 122 FVQGELRPDLTLIFDLPVEVGLARAAAR------GRLDRFEQEGRGFFEAVRQAYLQRAV 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P ++D+ + V +I ++ L++ Sbjct: 176 QAPQHYRVLDAGQTLAQVQADIDALLPSLLE 206 >gi|219849803|ref|YP_002464236.1| dTMP kinase [Chloroflexus aggregans DSM 9485] gi|219544062|gb|ACL25800.1| dTMP kinase [Chloroflexus aggregans DSM 9485] Length = 225 Score = 270 bits (692), Expect = 8e-71, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 5/226 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+FEG EGAGK+T L LQ Y V +TREPGGT E R +L+ Sbjct: 1 MHRGLFITFEGPEGAGKSTQARRLYERLQAAGYPVILTREPGGTRIGELIRRILIDLRHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++F+AAR V +IRP L G I++CDR+ DS++AYQG L + Sbjct: 61 EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRVI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFERKDVMIHEKRRQI 176 E++ + PD T L + V+IGL+R Q+ E + + +D+ H + Sbjct: 121 TEVATGGLKPDLTFYLQIDVEIGLQRKQHARERSERGGQPAEWNRLDARDLAYHRRVMHG 180 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 F+++ + +P+R H +D+ +A I + V L+ R++PL+++ Sbjct: 181 FVELMKQEPERWHALDADQPVDELAEQIWHAVMPLL-DRITPLATR 225 >gi|150396510|ref|YP_001326977.1| thymidylate kinase [Sinorhizobium medicae WSM419] gi|150028025|gb|ABR60142.1| dTMP kinase [Sinorhizobium medicae WSM419] Length = 234 Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 106/212 (50%), Positives = 142/212 (66%), Gaps = 3/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + GLFI+FEG EGAGK+T + LL L + Y V TREPGG+ AEA RHVLLS + Sbjct: 11 LAKGLFITFEGGEGAGKSTQMRLLAEALSARGYRVLTTREPGGSAGAEAVRHVLLSGAAE 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG EAI+FAAAR DHVE VIRPAL +G I+LCDRF+DSS YQG + + F+++L Sbjct: 71 SFGVRMEAILFAAARSDHVEEVIRPALEDGTIVLCDRFMDSSRVYQGVTGNLEPSFVETL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++V V+PDCTII DLP IGL+R + R + + D FE++ + HEKRR+ FLDI Sbjct: 131 ERVAVNGVIPDCTIIFDLPAAIGLERARRRAA---NNSPDRFEKEQLETHEKRREAFLDI 187 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A RC +VD+ ++A ++LN+V L+ Sbjct: 188 AATDSKRCRVVDANRPPAAIAADVLNLVKALL 219 >gi|222055245|ref|YP_002537607.1| dTMP kinase [Geobacter sp. FRC-32] gi|254808294|sp|B9M910|KTHY_GEOSF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221564534|gb|ACM20506.1| dTMP kinase [Geobacter sp. FRC-32] Length = 214 Score = 270 bits (692), Expect = 9e-71, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 1/211 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT I LL++ L K + V +TREPGG P A+ R +LL Sbjct: 2 GCFITFEGIEGCGKTTQIKLLEQHLAEKGFKVLLTREPGGCPIADQIRAILLDAANSAMT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HVE VI+PAL + I+LCDRF D++ AYQG + L ++ Sbjct: 62 PSAELLLYAAARAQHVEEVIKPALADDCIVLCDRFTDATVAYQGYGRGLDLDSIGYLNQL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIAR 182 + + P TI+LD PV++GLKR R + + + FE + + H+K R +L +A Sbjct: 122 ATSGLKPQLTILLDCPVEVGLKRALARINGISAGAREERFELESTLFHQKVRNGYLKLAE 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 N+ R IVD + + V + Sbjct: 182 NEKGRFLIVDGGTNVDETRVAVTTAVIGRLN 212 >gi|81427954|ref|YP_394953.1| thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei 23K] gi|123564716|sp|Q38YT6|KTHY_LACSS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78609595|emb|CAI54641.1| Thymidylate kinase (dTMP kinase) [Lactobacillus sakei subsp. sakei 23K] Length = 214 Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 117/209 (55%), Gaps = 5/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG +GAGKT+ + + LQ++ + ++ VTREPGG P +E R ++L Sbjct: 3 GKLITFEGPDGAGKTSALEAVVARLQKEVSQEIVVTREPGGNPISEQIRQIILDVKNTAM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I+PAL K+++CDRF+DSS AYQG + + Sbjct: 63 DDRTEALLYAAARRQHIVEKIQPALAADKLVICDRFVDSSIAYQGAGRGIGEEAVAQMNL 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+P ++GL R++ D +++ + H+K RQ +L +A+ Sbjct: 123 FATDGLTPDLTLYLDVPSEVGLARIKQ----HRQNQYDRLDQEKLAFHQKVRQSYLKLAQ 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 PDR +D++ ++V T L ++ + Sbjct: 179 AHPDRIKTIDASQPLEAVVTQCLQVIAQA 207 >gi|78357381|ref|YP_388830.1| thymidylate kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123552103|sp|Q30YW1|KTHY_DESDG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78219786|gb|ABB39135.1| thymidylate kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 212 Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 1/208 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T ++ LK +LQ + +TREPGG+ R +LL G D+ Sbjct: 1 MFITFEGIEGSGKSTALARLKDWLQEHGHGATLTREPGGSRLGGILRSILLDIGNDDLTG 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++ A R HV VIRPAL EG ++ DR+ DS+ YQG L L +++ Sbjct: 61 ETELFLYLADRSQHVHQVIRPALAEGVAVISDRYADSTVVYQGYGRGLDPALLHRLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V+ + PD T++ DL +IGLKR R + + FE + + H + R+ +L A Sbjct: 121 VRGLWPDLTLLFDLEPEIGLKRATTRNLREGTGATEGRFEAESLAFHTRVREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 +R I+D+A S V + + V ++ Sbjct: 181 NKERFRIIDAAASPDEVFEQVRSAVADV 208 >gi|218463772|ref|ZP_03503863.1| thymidylate kinase [Rhizobium etli Kim 5] Length = 220 Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 105/207 (50%), Positives = 147/207 (71%), Gaps = 3/207 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHVLLS + FG Sbjct: 1 MFVTFEGGEGAGKSTQIRRLAEALKGEGHEVLVTREPGGSPGAEAVRHVLLSGAAEAFGT 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAI+FAAAR DHVE VIRPAL GKI+LCDRF+DSS YQG + + F+++LQ I+ Sbjct: 61 RMEAILFAAARNDHVEEVIRPALAAGKIVLCDRFMDSSRVYQGITGNLEPDFIETLQRIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V+PDCT+ILD+P +GL+R Q R + + D FE++ + HEKRR+ FLDIA + Sbjct: 121 INGVVPDCTLILDIPAKVGLERAQKRSA---AEAPDRFEKERLETHEKRREAFLDIAARE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P+RC ++++ + +++A IL IV +L Sbjct: 178 PERCRVINAMQTEEAIAAEILAIVKQL 204 >gi|146318315|ref|YP_001198027.1| thymidylate kinase [Streptococcus suis 05ZYH33] gi|145689121|gb|ABP89627.1| Thymidylate kinase [Streptococcus suis 05ZYH33] gi|292558109|gb|ADE31110.1| Thymidylate kinase [Streptococcus suis GZ1] Length = 222 Score = 269 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEG +GAGKTT + L LQ +V TREPGG AE R+++L+ Sbjct: 11 MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++F AAR H++ I P L +GK+LL DRF+DSS AYQG + L Sbjct: 71 AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ +D + + +H + RQ +L I Sbjct: 131 NQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDMEKADMHRRVRQGYLSI 186 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R +D++ ++V N L ++ + +R Sbjct: 187 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAER 221 >gi|326202926|ref|ZP_08192793.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] gi|325987003|gb|EGD47832.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] Length = 206 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT I L++ FL+ DV ++REPGGT +E R+++L G Sbjct: 1 MCKGLFITVEGTDGSGKTTQIKLMEEFLKAAGNDVVLSREPGGTEISETIRNLILDPGNK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++AAAR HV VIRP+L GK ++CDRF+DSSYAYQG + + Sbjct: 61 DISPLTEMLLYAAARAQHVFQVIRPSLESGKCVICDRFVDSSYAYQGCGRGVDLKTVADV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V V+PD T L++ + ++R +S D E++ + H + + + + Sbjct: 121 NRAAVDGVVPDITFFLNIDPRLAIER------RIKSTGADRIEQEKMDFHMRVYEGYRKM 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A PDR +D++ S + ++ I + E++ Sbjct: 175 ALLYPDRIKSIDASKSIEEISLQIKTYLKEIL 206 >gi|153009407|ref|YP_001370622.1| thymidylate kinase [Ochrobactrum anthropi ATCC 49188] gi|151561295|gb|ABS14793.1| dTMP kinase [Ochrobactrum anthropi ATCC 49188] Length = 218 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 101/213 (47%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL + L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 6 SGLFITFEGGEGAGKSTQIALLAKHLRANGFDPVITREPGGSPGAEAIRHVILSGNAENY 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA EA++F AAR DHV +IRPAL EG+++LCDRF+DSS AYQG + ++ +++ Sbjct: 66 GAAMEALLFGAARADHVNQLIRPALNEGRVVLCDRFIDSSRAYQGVTGNLDRTYMAAVER 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ VMPD TIILD+P + GL R R R S D FE++D+ +HE RRQ FL IA Sbjct: 126 IAIDGVMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+RC ++D+ +A+++ V +++R Sbjct: 183 AEPERCKVIDADRLQDQIASDVAKEVDSALKER 215 >gi|297717894|gb|ADI50090.1| thymidylate kinase [Candidatus Odyssella thessalonicensis L13] Length = 205 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 81/208 (38%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++G FI+FEG EG GK+T LL +L+++ Y+V +TREPGGT AE R +L+S V+ Sbjct: 1 MSAGKFITFEGGEGTGKSTQCQLLADYLRQQGYEVILTREPGGTDGAELIRALLVSGDVN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AAR+DH E VI PAL G ++CDRF DS+ AYQG FL +L Sbjct: 61 RWSGVTEALLLNAARVDHWEKVISPALNRGAWVICDRFADSTIAYQGFGRGLDIDFLWNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD T + DL IG+ R +R + FE+ D+ H + R +L+I Sbjct: 121 HNSVLPGVQPDLTFVFDLDPAIGINRALSRRTSEV-----RFEKMDIEFHNRMRHGYLEI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A+N P RC +VD+ ++ ++ ++ Sbjct: 176 AKNHPQRCRLVDAGQDINTIHHHLQQMI 203 >gi|227822155|ref|YP_002826126.1| thymidylate kinase [Sinorhizobium fredii NGR234] gi|227341155|gb|ACP25373.1| thymidylate kinase [Sinorhizobium fredii NGR234] Length = 234 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 107/221 (48%), Positives = 145/221 (65%), Gaps = 3/221 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++FEG EGAGK+T + LL L + YDV TREPGG+ AEA RHVLLS + Sbjct: 12 TKGLFVTFEGGEGAGKSTQMRLLADSLSGRGYDVLTTREPGGSLGAEAVRHVLLSGAAES 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL +G+I+LCDRF+DSS YQG + + F+++L+ Sbjct: 72 FGVRMEAILFAAARSDHVEEVIRPALQQGRIVLCDRFMDSSRVYQGVTGNLEPGFVETLE 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++V V+PD TII DLP + GL+R + R + D FE++ + HEKRR+ FLDIA Sbjct: 132 RVAVNGVVPDRTIIFDLPAEAGLERARRRSL---NVDPDRFEKEQLETHEKRREAFLDIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 P+RC +VD+ + +A +L +V L+ P SS+ Sbjct: 189 EADPERCRVVDATLPPEVIAAEVLRLVEALLPGDGEPQSSR 229 >gi|146340769|ref|YP_001205817.1| thymidylate kinase [Bradyrhizobium sp. ORS278] gi|166221723|sp|A4YUL6|KTHY_BRASO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146193575|emb|CAL77592.1| thymidylate kinase [Bradyrhizobium sp. ORS278] Length = 226 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 92/210 (43%), Positives = 134/210 (63%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++FEG EGAGK+T I +L L++ V +TREPGG+P AE RH++LS Sbjct: 12 RGRFVTFEGGEGAGKSTQIKMLADRLEKDGVRVVLTREPGGSPGAEIMRHLVLSGMGKLL 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GAEAE ++FAAAR DHV NVI PAL +G +LCDRF DS+ AYQG + L+++Q Sbjct: 72 GAEAETLLFAAARDDHVRNVILPALNQGSWVLCDRFFDSTRAYQGSQGKVAPDVLNAMQR 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ ++ PD T+ILD+PV++GL+R R R S D FE +D+ H+ R F IA Sbjct: 132 VTIGDLKPDLTLILDVPVEVGLQRASAR---RGSGAPDRFESEDIKFHKGLRDAFHKIAA 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P RC ++D+ S ++V+ + + V E + Sbjct: 189 TEPRRCVLIDATASAEAVSNIVWDAVRERL 218 >gi|83588915|ref|YP_428924.1| thymidylate kinase [Moorella thermoacetica ATCC 39073] gi|83571829|gb|ABC18381.1| thymidylate kinase [Moorella thermoacetica ATCC 39073] Length = 207 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 86/214 (40%), Positives = 121/214 (56%), Gaps = 8/214 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT + L+ +L R+ V TREPGGT +EA R +LL Sbjct: 1 MGRGLFITLEGPDGSGKTTQMDRLEEYLHRRGLAVERTREPGGTLLSEAIRRLLLEPSYS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A AE ++AAAR HV IRPAL GKI+LCDRF DS+ AYQG ++ L Sbjct: 61 PVDARAELFLYAAARAQHVAERIRPALAAGKIVLCDRFSDSTLAYQGYGRQLGAELVERL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ + PD T ++D+PV IGL R S D E++D+ H + RQ +LD+ Sbjct: 121 NDLATGNLRPDITFLIDVPVAIGLGR--------HSGGSDRLEQEDLEFHRRVRQGYLDL 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 AR +P R H++D S V I I+ +++ Sbjct: 173 ARREPRRVHLIDGTPSPDVVWEEIKEILDARLER 206 >gi|223932402|ref|ZP_03624404.1| dTMP kinase [Streptococcus suis 89/1591] gi|302023623|ref|ZP_07248834.1| thymidylate kinase [Streptococcus suis 05HAS68] gi|330832635|ref|YP_004401460.1| dTMP kinase [Streptococcus suis ST3] gi|223898856|gb|EEF65215.1| dTMP kinase [Streptococcus suis 89/1591] gi|329306858|gb|AEB81274.1| dTMP kinase [Streptococcus suis ST3] Length = 212 Score = 268 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEG +GAGKTT + L LQ +V TREPGG AE R+++L+ Sbjct: 1 MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++F AAR H++ I P L +GK+LL DRF+DSS AYQG + L Sbjct: 61 EMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ +D + + +H + RQ +L+I Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDMEKADMHRRVRQGYLNI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R +D++ ++V + L ++ + +R Sbjct: 177 LEQEPERFVKIDASQPLEAVVADALAVIKKRFAER 211 >gi|258405528|ref|YP_003198270.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692] gi|257797755|gb|ACV68692.1| thymidylate kinase [Desulfohalobium retbaense DSM 5692] Length = 215 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 1/206 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T +LL ++L+ ++V TREPGG+ + R +LLS + Sbjct: 1 MFITFEGIEGCGKSTQSTLLAQWLKNHGWEVQTTREPGGSRLGQNLRSILLSMESRDLTG 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E+E ++ A R HV I+PAL +G ++L DRF DS+ YQG L +L +++ Sbjct: 61 ESELFLYLADRAQHVHQTIKPALDKGAVVLSDRFADSTVVYQGYGRGLDPNLLHTLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 VQ V PD T++ DLPV++GLKR R + FE + + H + R+ +L A Sbjct: 121 VQGVWPDLTLLFDLPVELGLKRAMARNFQDNKTEQEGRFEAESLAFHSRVREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 +R +VD+ +++ + I+ Sbjct: 181 NKNRFQVVDAEPDPETIFNEVQRILR 206 >gi|302390839|ref|YP_003826659.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501] gi|302202916|gb|ADL11594.1| thymidylate kinase [Acetohalobium arabaticum DSM 5501] Length = 210 Score = 268 bits (687), Expect = 4e-70, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 120/211 (56%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+ EG EGAGK+T I LL ++ + Y+V TREPGGT R++LL +D Sbjct: 2 KGLFITLEGPEGAGKSTQIELLNKYFSEQGYEVVQTREPGGTEIGSRIRNILLDSNLDNL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +++AA+R HV VI+PAL EGK+++CDRF D++ AYQG + L + Sbjct: 62 EPKTELLLYAASRAQHVNEVIKPALKEGKVIICDRFSDATLAYQGYGRRLDKDLILKLNQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + PD T +LD+ + GL R +N D ER+D+ H++ R +L +A Sbjct: 122 MATGGLEPDLTFLLDIEPEEGLLRTKN-------EVRDRIEREDLSFHQQVRDGYLKLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R ++D + S +++ N++ + E ++ Sbjct: 175 K-KSRFEVIDGSQSIENIFDNLIETLEERLE 204 >gi|220927615|ref|YP_002504524.1| thymidylate kinase [Clostridium cellulolyticum H10] gi|219997943|gb|ACL74544.1| thymidylate kinase [Clostridium cellulolyticum H10] Length = 206 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT I L++++L+ +V ++REPGGT +E R ++L Sbjct: 1 MRKGLFITVEGTDGSGKTTQIKLMEQYLKDMGNEVVLSREPGGTRISEMIRDLILDPENK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++AAAR HV VIRPA+ GK ++CDRF+DSSYAYQG + + Sbjct: 61 DISPLTEMMLYAAARAQHVSQVIRPAIESGKSVICDRFVDSSYAYQGCGRGVDLKTIADV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V+PD T LDL + ++R +S D E++ + H + + + + Sbjct: 121 NRAAIDGVVPDITFFLDLDPRVAMER------RVKSTGADRIEQEKMDFHIRVYEGYERM 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P+R +D++ S + +++ I + E++ Sbjct: 175 ALLYPERIKTIDASKSIEEISSQINIYLKEIL 206 >gi|299133890|ref|ZP_07027084.1| thymidylate kinase [Afipia sp. 1NLS2] gi|298591726|gb|EFI51927.1| thymidylate kinase [Afipia sp. 1NLS2] Length = 232 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 94/218 (43%), Positives = 127/218 (58%), Gaps = 7/218 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GK+T I +L L+ + + VTREPGG+P AE RH+LLS G Sbjct: 17 GRFITFEGGEGSGKSTQIQMLADHLKSQGIETLVTREPGGSPGAEIVRHLLLSGVGKLLG 76 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+AE ++FAAAR DHV VIRPAL +G +LCDRF DS+ AYQG F+ +L Sbjct: 77 ADAETLLFAAARDDHVHQVIRPALDKGTWVLCDRFTDSTAAYQGAAGKVDPAFIQALTHA 136 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + PD T ILD+PV +GL+R R R D FE + + HE R+ + IA + Sbjct: 137 TIGRLEPDLTFILDVPVAVGLQRAIKR---RGRTAADRFEGESLAFHESLREAYRRIAAD 193 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P RC ++D+ VA I E +Q R+ SS Sbjct: 194 NPARCVVIDANAEPAKVAERIR----EALQSRLPAPSS 227 >gi|86608314|ref|YP_477076.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)] gi|123503195|sp|Q2JN62|KTHY_SYNJB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|86556856|gb|ABD01813.1| thymidylate kinase [Synechococcus sp. JA-2-3B'a(2-13)] Length = 206 Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 109/208 (52%), Gaps = 11/208 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EG GKTT +LL L+++ Y TREPGGT + R +LL D F Sbjct: 1 MFITLEGGEGVGKTTQQALLVERLRQEGYACLCTREPGGTALGKTLRELLLHG--DPFSP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++AA R +HV VI PAL G++++CDRF DS+ AYQG + L ++ Sbjct: 59 LAELLLYAADRAEHVSKVIAPALAAGQVVVCDRFTDSTLAYQGYGRGLDLEKIRQLNHLA 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P T+ LDLP ++GL R + R D E++ + H + Q F +A + Sbjct: 119 TGGLQPHLTLWLDLPPEVGLARAKAR---------DRLEQERLEFHRRVYQGFQALAAAE 169 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P R + + S VA + ++V + Sbjct: 170 PQRIVRISAQGSPAEVAARLWSVVEPRL 197 >gi|265984061|ref|ZP_06096796.1| thymidylate kinase [Brucella sp. 83/13] gi|306838352|ref|ZP_07471197.1| thymidylate kinase [Brucella sp. NF 2653] gi|264662653|gb|EEZ32914.1| thymidylate kinase [Brucella sp. 83/13] gi|306406492|gb|EFM62726.1| thymidylate kinase [Brucella sp. NF 2653] Length = 214 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILAEK 211 >gi|312962561|ref|ZP_07777051.1| Thymidylate kinase [Pseudomonas fluorescens WH6] gi|311283141|gb|EFQ61732.1| Thymidylate kinase [Pseudomonas fluorescens WH6] Length = 210 Score = 268 bits (686), Expect = 5e-70, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R VLL+ G ++ Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G +++CDRF DS+YAYQG + +L+ Sbjct: 62 NPDTELLLVFAARAQHLSEVIRPALARGAVVICDRFTDSTYAYQGGGRGLCLARIATLES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++G+ R R LD FE + + R FL A+ Sbjct: 122 FVQGDLRPDLTLLFDLPVEVGMARASAR------GRLDRFELEGQAFFDLVRSAFLARAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R H++D++ V I ++ L+++ Sbjct: 176 AEPARYHLLDASQPLAQVQQAIDALLPLLLER 207 >gi|168187948|ref|ZP_02622583.1| thymidylate kinase [Clostridium botulinum C str. Eklund] gi|169294219|gb|EDS76352.1| thymidylate kinase [Clostridium botulinum C str. Eklund] Length = 212 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+ EG EG+GKTT + +++ +L+ N D TREPGG +E R+V+L+ Sbjct: 1 MNKGIFITLEGPEGSGKTTIVKMIEEYLRENNIDYISTREPGGINISEQIRNVILNKDNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++ A+R H+ + PAL GK+++CDRF+DSS AYQG + + Sbjct: 61 EMDPRTEALLYVASRRQHLAERVIPALKSGKVVICDRFVDSSLAYQGYARGIGIDEVMEI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ MPD T+ LD+ +IGL R+ ++ + + + H+K R+ + + Sbjct: 121 NEFAIDGYMPDLTLYLDIEPEIGLNRISKNSE----REVNRLDLEKLDFHKKVREGYFKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +++ S V T + N + ++ Sbjct: 177 LERYPNRIKQINANQSVDKVFTEVKNFLKSVL 208 >gi|291298371|ref|YP_003509649.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728] gi|290567591|gb|ADD40556.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728] Length = 707 Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 107/211 (50%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDE 61 G F+ FEG EG+GK+T L +L+++ ++V +TREPG T R +LL Sbjct: 468 GGTFVVFEGGEGSGKSTQAVKLAAWLRQRGHEVVLTREPGATELGVRIRTLLLDPESGTS 527 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV V+RPAL G +++ DR++DSS AYQG + L Sbjct: 528 PSPRTEALLYAADRAQHVSKVVRPALDRGAVVISDRYVDSSLAYQGSGRELPADEVAWLS 587 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD ++LD+ +GL R + D E++ + HE R+ F D+A Sbjct: 588 HWATGGLKPDLVVLLDIDPRVGLVRATK------GSAGDRLEQEALTFHEAVREKFRDLA 641 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +VD+ S + +A + V +V Sbjct: 642 ADDSSRYLVVDATQSPEDIAAKVSERVAAVV 672 >gi|325295138|ref|YP_004281652.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065586|gb|ADY73593.1| Thymidylate kinase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 206 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 7/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T LL + +K + +TREPGGTPAAE R+ +L + F A Sbjct: 1 MFITFEGIEGCGKSTQAKLLYDWFLKKGKEAILTREPGGTPAAEEIRNFILRPRKETFPA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ AAR HVEN+I+PAL +G ++CDRF+DS+ AYQG ++ L E + Sbjct: 61 FAELCLYMAARGFHVENLIKPALKKGIWVVCDRFVDSTVAYQGYGRGINVELIEKLNEEA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T ++D+PV+IG R++ R LD E++++ HE+ RQ FL IA Sbjct: 121 TGNLKPDLTFLIDVPVEIGFSRIKRR-------DLDRMEQEEMDFHERVRQGFLRIAEKN 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 +R ++D + ILN + + Sbjct: 174 SERVIVIDGTKKVDEIFDEILNTLKK 199 >gi|261754954|ref|ZP_05998663.1| thymidylate kinase [Brucella suis bv. 3 str. 686] gi|306843867|ref|ZP_07476462.1| thymidylate kinase [Brucella sp. BO1] gi|38258158|sp|Q8G0U3|KTHY_BRUSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|261744707|gb|EEY32633.1| thymidylate kinase [Brucella suis bv. 3 str. 686] gi|306275622|gb|EFM57346.1| thymidylate kinase [Brucella sp. BO1] Length = 214 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|206891148|ref|YP_002248232.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347] gi|206743086|gb|ACI22143.1| thymidylate kinase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 209 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+FEGIEG+GKTT LL L+++ V T EPG T A R +LL+ + Sbjct: 1 MNKGIFITFEGIEGSGKTTQGKLLAEKLKKEGLKVLYTYEPGDTEAGRHIRKILLNSEI- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++ A R+ H+E I+P + G I++CDRF DS+ YQG + L Sbjct: 60 KINPLCELLLYFADRVQHIEEKIKPCIESGFIVICDRFTDSTLVYQGYARGISIDLIKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I + E MPD T++LD P +IGLKR ++ D FE +++ HEK RQ +L + Sbjct: 120 NKIVLDEFMPDLTVLLDCPANIGLKR------NQKINKKDRFEMENLAFHEKVRQGYLKL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A R ++D+ S +A +I V ++ Sbjct: 174 AELYKKRFFVLDATESIDKIAEDIYRKVKSIL 205 >gi|16126067|ref|NP_420631.1| thymidylate kinase [Caulobacter crescentus CB15] gi|221234837|ref|YP_002517273.1| thymidylate kinase [Caulobacter crescentus NA1000] gi|10720067|sp|Q9RQJ9|KTHY_CAUCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|6318310|gb|AAF06831.1|AF099189_1 thymydilate kinase [Caulobacter crescentus CB15] gi|13423259|gb|AAK23799.1| thymidylate kinase [Caulobacter crescentus CB15] gi|220964009|gb|ACL95365.1| thymidylate kinase [Caulobacter crescentus NA1000] Length = 208 Score = 268 bits (685), Expect = 6e-70, Method: Composition-based stats. Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEG EGAGK+T I L L+ +DV VTREPGG+P AEA R +L++ D Sbjct: 1 MTQGFFISFEGGEGAGKSTQIRRLADRLKAAGHDVIVTREPGGSPGAEAIRELLVNGAAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E+++ AAR DH+E VIRP L G ++LCDRF DS+ AYQG + + +L Sbjct: 61 RWSPVTESLLMYAARRDHIERVIRPGLARGAVVLCDRFADSTRAYQGAGGDAPASLIAAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E + +P T+ILDLP ++GL+R + R FE K + HE+ R +L+I Sbjct: 121 EEHVLGGTVPVLTLILDLPAEVGLQRAEARGGAA------RFESKGLAFHERLRAGYLEI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 AR +PDRC ++D+ +V I ++V + + Sbjct: 175 ARREPDRCVVIDADAELDAVTAAISDVVVQRL 206 >gi|118589860|ref|ZP_01547264.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614] gi|118437357|gb|EAV43994.1| THYMIDYLATE KINASE [Stappia aggregata IAM 12614] Length = 241 Score = 267 bits (684), Expect = 6e-70, Method: Composition-based stats. Identities = 95/223 (42%), Positives = 134/223 (60%), Gaps = 1/223 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGK+T I+ LK +L+ V VTREPGG+P AE R +LLS G + Sbjct: 15 SGHFITFEGGEGAGKSTQIARLKTYLEGMGQSVVVTREPGGSPGAEKIRTMLLSGGAKDL 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ I+PAL G +LCDR+ DS++ YQGE +L L+ Sbjct: 75 GPRGEAMLFAAARADHVDTTIKPALERGDWVLCDRYADSTWVYQGEA-GVDREYLKLLET 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +V V PD TI++D+PV+IGL RV R S D FE +D+ +H++RR++FL++A+ Sbjct: 134 AAVAGVYPDLTILIDVPVEIGLGRVAERSRTDNSGGPDRFEDEDLKVHQRRRELFLELAK 193 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 + R ++D + VA I V + + S I Sbjct: 194 IESFRFAVIDGSKGLDEVAAAIREAVQKTFSNDLPQAKSTTSI 236 >gi|253751477|ref|YP_003024618.1| thymidylate kinase [Streptococcus suis SC84] gi|253753378|ref|YP_003026519.1| thymidylate kinase [Streptococcus suis P1/7] gi|253755793|ref|YP_003028933.1| thymidylate kinase [Streptococcus suis BM407] gi|251815766|emb|CAZ51368.1| thymidylate kinase [Streptococcus suis SC84] gi|251818257|emb|CAZ56065.1| thymidylate kinase [Streptococcus suis BM407] gi|251819624|emb|CAR45362.1| thymidylate kinase [Streptococcus suis P1/7] gi|319757895|gb|ADV69837.1| thymidylate kinase [Streptococcus suis JS14] Length = 212 Score = 267 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 113/215 (52%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEG +GAGKTT + L LQ +V TREPGG AE R+++L+ Sbjct: 1 MRNGFFITFEGPDGAGKTTVLQQLLPALQELGPEVVTTREPGGVAIAEEIRNIILNPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++F AAR H++ I P L +GK+LL DRF+DSS AYQG + L Sbjct: 61 AMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAYQGFGRGLDIGDIHWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ +D + + +H + RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDMEKADMHRRVRQGYLSI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R +D++ ++V N L ++ + +R Sbjct: 177 LEQEPERFVKIDASQPLEAVVANALAVIKKRFAER 211 >gi|269128739|ref|YP_003302109.1| thymidylate kinase [Thermomonospora curvata DSM 43183] gi|268313697|gb|ACZ00072.1| thymidylate kinase [Thermomonospora curvata DSM 43183] Length = 671 Score = 267 bits (684), Expect = 8e-70, Method: Composition-based stats. Identities = 77/223 (34%), Positives = 116/223 (52%), Gaps = 10/223 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG EGAGKTT L +L+ YDV T EPG T R +LL Sbjct: 450 RGVFIAFEGGEGAGKTTQARLTAIWLRDHGYDVVTTNEPGATKVGMRLRAILLDKETTGL 509 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A AE +++AA R +HV NVI+PAL G I++ DR++DSS AYQG + + Sbjct: 510 SARAETLLYAADRANHVANVIKPALERGAIVVSDRYVDSSLAYQGYGRELPVEEIAEVNR 569 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LDLP GL R + D E + + HE+ R+ F +A Sbjct: 570 WATDGLQPDLTVLLDLPPQTGLGRFAS--------PADRMESEPLDFHERVRRGFRKLAE 621 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 PDR ++D+ + ++ I + + +++ + P S +DI Sbjct: 622 ADPDRYLVLDATRPQEELSRQIRDRLRQILPDPIPP--STEDI 662 >gi|167032505|ref|YP_001667736.1| thymidylate kinase [Pseudomonas putida GB-1] gi|189030837|sp|B0KF60|KTHY_PSEPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166858993|gb|ABY97400.1| dTMP kinase [Pseudomonas putida GB-1] Length = 210 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAERVRELLLAPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++ DLPV++GL R R LD FE++ E RQ +L A+ Sbjct: 122 FVQGGLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A S ++V +I ++ +V++ Sbjct: 176 RAPQRYSLLDAAQSLEAVQRDIDALLPGIVER 207 >gi|291452943|ref|ZP_06592333.1| thymidylate kinase [Streptomyces albus J1074] gi|291355892|gb|EFE82794.1| thymidylate kinase [Streptomyces albus J1074] Length = 1104 Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 507 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 566 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 567 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 626 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 627 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 678 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +VD+ + V T + + + +L+ Sbjct: 679 ADQDRYLVVDAGQQPEEVTTVVRHRLDQLL 708 >gi|163868322|ref|YP_001609531.1| thymidylate kinase [Bartonella tribocorum CIP 105476] gi|161017978|emb|CAK01536.1| Thymidylate kinase [Bartonella tribocorum CIP 105476] Length = 214 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 2/215 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG +G GKT ISLL +L + YDV TREPGGT AEA RH+LLS V ++ Sbjct: 2 SGYFITFEGGDGVGKTVQISLLAEYLSHQGYDVVTTREPGGTAGAEAIRHILLSGKVQQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++F AAR DHV +I P+L +GKI+LCDRF+DS+ YQG + L L+ Sbjct: 62 GPLIEAVLFTAARTDHVAEIIAPSLQKGKIVLCDRFIDSTRVYQGLNERVNSSLLSVLEC 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ +MP T +LD+P G+KR R +++ +DYFE+K + I E+RRQ FL +A+ Sbjct: 122 IALNGIMPHLTFLLDMPAACGIKRANLR--RKKTEEIDYFEKKPLEIQEQRRQAFLQLAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P R ++D+ S + +A I NI +++ ++S Sbjct: 180 QEPHRFRVIDATGSVEVIAHQIKNICHQVLLDKLS 214 >gi|242279385|ref|YP_002991514.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638] gi|259494265|sp|C6BUG6|KTHY_DESAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|242122279|gb|ACS79975.1| thymidylate kinase [Desulfovibrio salexigens DSM 2638] Length = 217 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 1/210 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GKTT I L FL+ ++V VT EPGG+ + R +LL+ + Sbjct: 1 MFITFEGIEGTGKTTQIKKLTAFLEESGHNVDVTLEPGGSRIGKELRKILLNMDSTDITG 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++ A R HV VI+PA+ GKI++ DRF DS+ YQG L L +++ Sbjct: 61 ECELFLYLADRAQHVGQVIKPAVEAGKIIISDRFADSTIVYQGYGRGLDPKLLRELNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V PD TI+LD+ +IGLKR R + FE + + H + R+ +L A Sbjct: 121 VSGNWPDLTILLDIDPEIGLKRAMTRNLQENKMQEEGRFEAESLEFHNRVREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 DR +V++ + + I V E ++ Sbjct: 181 NNDRIVVVNADQTPDEIFKEIKAKVVERIK 210 >gi|239981076|ref|ZP_04703600.1| thymidylate kinase [Streptomyces albus J1074] Length = 1095 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 498 TGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPIGKRLRAILLDVSSAGL 557 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 558 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 617 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 618 WATGGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAAFHQRVRAGFLTLAA 669 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +VD+ + V T + + + +L+ Sbjct: 670 ADQDRYLVVDAGQQPEEVTTVVRHRLDQLL 699 >gi|297616259|ref|YP_003701418.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680] gi|297144096|gb|ADI00853.1| thymidylate kinase [Syntrophothermus lipocalidus DSM 12680] Length = 223 Score = 267 bits (683), Expect = 9e-70, Method: Composition-based stats. Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 7/214 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ FISFEGI+GAGKTT + LL R L + V REPG TP +E R +LL Sbjct: 1 MHRKCFISFEGIDGAGKTTQVELLYRKLMDVGFSVVAVREPGSTPLSEKIRELLLDVRNQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + AE+ ++AAAR V +I+PAL GK+++ DR++DS+ AYQG FL L Sbjct: 61 DISSSAESFLYAAARSQLVAEIIKPALDAGKVVIADRYVDSTIAYQGYGRGMDIEFLKRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +MP TI+LDLP + G+ R R LD ER+ + H R+ +L + Sbjct: 121 NLLATGGLMPCLTILLDLPPEEGIAR-------RGELPLDRLEREGIGFHRAVREGYLTL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R++PDR +VD+ + V IL V E +++ Sbjct: 174 SRSEPDRIMVVDARLQVEDVHEQILKRVLERLRR 207 >gi|322390021|ref|ZP_08063559.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903] gi|321143275|gb|EFX38715.1| thymidylate kinase [Streptococcus parasanguinis ATCC 903] Length = 212 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G ISFEG EGAGK++ + + L+ K TREPGG AE R V+L Sbjct: 1 MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL GKI+L DRF+DSS AYQG ++ L Sbjct: 61 SMDAKTELLLYIASRRQHLVERVLPALAAGKIVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDVDVEEGLARIAKNQE----REVNRLDLEGLELHQKVRQGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +D++ SF++V ++L ++ + Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVLENRL 208 >gi|46203463|ref|ZP_00208978.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1] Length = 212 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 116/210 (55%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T + LL L+ + V TREPGG+ AEA R +L+ + Sbjct: 5 RGRFITFEGGEGAGKSTQVRLLADSLRDEGLMVVTTREPGGSTGAEAIRALLVEGDTARW 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++ AAR DH+ + PAL G ++CDRF DS+ AYQG + SL Sbjct: 65 DGVTEALLHFAARRDHLLKTVWPALERGAWVICDRFADSTLAYQGFGHGLDPDVIASLYR 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V PD T++LDLPV+ GL+R R D +ER + H++ RQ FL IA Sbjct: 125 VAVGHFAPDLTLVLDLPVETGLERAGAR-----GGAEDRYERMGLGFHQRLRQGFLGIAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P RC ++D+ S V +I++ V + Sbjct: 180 SNPMRCAVIDATRSPDEVHGDIMSTVRARL 209 >gi|299536748|ref|ZP_07050058.1| thymidylate kinase [Lysinibacillus fusiformis ZC1] gi|298727862|gb|EFI68427.1| thymidylate kinase [Lysinibacillus fusiformis ZC1] Length = 209 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNS LFI+FEG EGAGKTT I ++ + L KN +V TREPGG AE R ++L+ Sbjct: 1 MNSNLFITFEGPEGAGKTTVIQMIAKRLTEKNIEVLATREPGGIEIAEKIRTIILNPAHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H +RPAL GK+++CDRF+DSS AYQG + S+ Sbjct: 61 AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQGYARGIGVNEVLSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + +PD TI+ DL ++GL R+ + ++ + + + H+K R+ +L + Sbjct: 121 NEFAIGKKLPDVTILFDLAPEVGLARIHA----TGNREVNRLDVESLPFHQKVREGYLQL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +V++ ++V ++ ++ E +Q Sbjct: 177 VEQYPERIRVVNADQDIENVVEDVWLLLLEAMQ 209 >gi|134297938|ref|YP_001111434.1| dTMP kinase [Desulfotomaculum reducens MI-1] gi|172044205|sp|A4J0K6|KTHY_DESRM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|134050638|gb|ABO48609.1| thymidylate kinase [Desulfotomaculum reducens MI-1] Length = 207 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 6/207 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEG++G+GK+T ++LL ++L +K TREPGGTP E R +LL E Sbjct: 5 FIVFEGVDGSGKSTQLNLLNKYLSQKEIKTICTREPGGTPVGEKIRELLLDPNFAEIQDR 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++++AAR V VIRP L +G ++LCDR++DS+ AYQG FL + E++ Sbjct: 65 TEALLYSAARAQLVAQVIRPQLEQGTVVLCDRYIDSTLAYQGYGRGMDISFLAQINELAS 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 +MP+ TI+LDLP + GL+R R+ D E + + + K R +L++A+ +P Sbjct: 125 GGLMPNITILLDLPPEEGLQR------SRKDRPADRLENESLTFYHKVRSGYLEMAKRKP 178 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212 D ++D+ + + + I V L+ Sbjct: 179 DTYLVLDARQTMEQLHRQICCRVGGLL 205 >gi|94986082|ref|YP_605446.1| thymidylate kinase [Deinococcus geothermalis DSM 11300] gi|94556363|gb|ABF46277.1| Thymidylate kinase [Deinococcus geothermalis DSM 11300] Length = 210 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 7/217 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLF++FEG EGAGK+T ++ L + L TREPGGTP R VLL + Sbjct: 1 MRPGLFVTFEGPEGAGKSTQLARLAQRLAETGRPPVTTREPGGTPLGMRVREVLLDPALT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++++A+R V +VIRPAL G+++LCDR+ DSS AYQG FL +L Sbjct: 61 -IDPLPEFLLYSASRAQLVRDVIRPALAAGQVVLCDRYADSSLAYQGSGRGLDPAFLAAL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD TI+LDL +GL R +R D ER D+ H + R FLD+ Sbjct: 120 TGEVTGGLQPDLTILLDLDPALGLARAASR------GQPDRLERADLTFHRRVRHGFLDL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A P+R ++D+A S+A +I V E ++ + Sbjct: 174 AAQAPERFLVLDAARDPDSLAADIWRAVQERLRAQTG 210 >gi|212703732|ref|ZP_03311860.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098] gi|212672884|gb|EEB33367.1| hypothetical protein DESPIG_01780 [Desulfovibrio piger ATCC 29098] Length = 217 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 121/216 (56%), Gaps = 1/216 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GKTT LL L+++ +DV +TREPGG A R +LL Sbjct: 1 MFITFEGIEGSGKTTAQQLLALELEKRGHDVLLTREPGGCGLGRALRPILLDARNAGLCN 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R HV ++RPAL G+I++CDR+ DS+ AYQG L +++ Sbjct: 61 RAELYLFLADRAQHVAEIVRPALEAGQIVICDRYTDSTLAYQGYGRGRDPDRLRRANDLA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 + PD T++ DLPV +GL+R R + + F+ + + HE+ RQ +L IA Sbjct: 121 TGGLQPDLTLLCDLPVSVGLERAGLRNRREGTVLSEGRFDSESLNFHERVRQGYLTIAEE 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 +PDR I+D++ + V L+ V +++R S L Sbjct: 181 EPDRIAIIDASQQPEDVVLQCLSAVERHLKRRGSGL 216 >gi|51894393|ref|YP_077084.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863] gi|59798210|sp|Q67JB0|KTHY_SYMTH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|51858082|dbj|BAD42240.1| thymidylate kinase [Symbiobacterium thermophilum IAM 14863] Length = 214 Score = 266 bits (682), Expect = 1e-69, Method: Composition-based stats. Identities = 86/217 (39%), Positives = 125/217 (57%), Gaps = 7/217 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEG++G+GK+T I LL ++L ++ TREPGGTP AE R VLL Sbjct: 4 FISFEGVDGSGKSTQIRLLLQYLDEQSVPYVFTREPGGTPIAEQIRRVLLDPANRGMSVI 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAAAR +HV IRPAL EGK+++CDRF+DSS YQG FL + E++ Sbjct: 64 TEALLFAAARAEHVSRTIRPALEEGKVVICDRFVDSSLVYQGVAGGLPVEFLTQINEMAT 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P TI+LDL ++ L R R D ER+ H+ R+ +LD+AR +P Sbjct: 124 GALRPHRTIVLDLAPEVALAR-------RTGEEADRIERQSREYHQLVREGYLDLARAEP 176 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 R +VD++ S + V +I +V E++ +R ++ Sbjct: 177 RRVKVVDASRSVEEVQKDIRRLVEEVLPRRFRGAGTR 213 >gi|92117540|ref|YP_577269.1| thymidylate kinase [Nitrobacter hamburgensis X14] gi|122417817|sp|Q1QLT8|KTHY_NITHX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91800434|gb|ABE62809.1| thymidylate kinase [Nitrobacter hamburgensis X14] Length = 230 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 91/210 (43%), Positives = 129/210 (61%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EG+GK+T I++L L VTREPGG+P AE RH++LS Sbjct: 12 RGRFITFEGGEGSGKSTQINILAERLNAAKLRAIVTREPGGSPGAEIIRHLVLSGMGKLL 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA AE ++FAAAR DHV VI+PAL +G +LCDRF DS+ AYQG L++L+ Sbjct: 72 GAYAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRAYQGRLGDVLPGVLNALER 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ ++ PD T+ILD+PV+IG++R R R S D FE +DV H+K R + DIA Sbjct: 132 VTIGDLKPDLTVILDVPVEIGMQRAAVR---RGSGAPDRFEAEDVAFHQKLRDAYRDIAA 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P RC ++D+ +VA + + + V Sbjct: 189 SDPQRCVVIDANADVNTVAAGVWAALRDRV 218 >gi|17987272|ref|NP_539906.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|148558979|ref|YP_001258934.1| thymidylate kinase [Brucella ovis ATCC 25840] gi|189024159|ref|YP_001934927.1| Thymidylate kinase [Brucella abortus S19] gi|225627470|ref|ZP_03785507.1| thymidylate kinase [Brucella ceti str. Cudo] gi|225852497|ref|YP_002732730.1| thymidylate kinase [Brucella melitensis ATCC 23457] gi|237815418|ref|ZP_04594416.1| thymidylate kinase [Brucella abortus str. 2308 A] gi|260545335|ref|ZP_05821076.1| thymidylate kinase [Brucella abortus NCTC 8038] gi|260563999|ref|ZP_05834485.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|260754728|ref|ZP_05867076.1| dTMP kinase [Brucella abortus bv. 6 str. 870] gi|260757951|ref|ZP_05870299.1| dTMP kinase [Brucella abortus bv. 4 str. 292] gi|260883749|ref|ZP_05895363.1| thymidylate kinase [Brucella abortus bv. 9 str. C68] gi|261213980|ref|ZP_05928261.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya] gi|261222160|ref|ZP_05936441.1| thymidylate kinase [Brucella ceti B1/94] gi|261314279|ref|ZP_05953476.1| thymidylate kinase [Brucella pinnipedialis M163/99/10] gi|261325087|ref|ZP_05964284.1| thymidylate kinase [Brucella neotomae 5K33] gi|261752297|ref|ZP_05996006.1| thymidylate kinase [Brucella suis bv. 5 str. 513] gi|261758182|ref|ZP_06001891.1| thymidylate kinase [Brucella sp. F5/99] gi|265988662|ref|ZP_06101219.1| thymidylate kinase [Brucella pinnipedialis M292/94/1] gi|265991077|ref|ZP_06103634.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1] gi|265994912|ref|ZP_06107469.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether] gi|265998125|ref|ZP_06110682.1| thymidylate kinase [Brucella ceti M490/95/1] gi|265999472|ref|ZP_05466544.2| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9] gi|294852415|ref|ZP_06793088.1| thymidylate kinase [Brucella sp. NVSL 07-0026] gi|297248318|ref|ZP_06932036.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196] gi|23821787|sp|Q8YH15|KTHY_BRUME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221724|sp|A5VQD7|KTHY_BRUO2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238689366|sp|B2S5K6|KTHY_BRUA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808281|sp|C0RIW8|KTHY_BRUMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|17982949|gb|AAL52170.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|148370236|gb|ABQ60215.1| thymidylate kinase [Brucella ovis ATCC 25840] gi|189019731|gb|ACD72453.1| Thymidylate kinase [Brucella abortus S19] gi|225617475|gb|EEH14520.1| thymidylate kinase [Brucella ceti str. Cudo] gi|225640862|gb|ACO00776.1| thymidylate kinase [Brucella melitensis ATCC 23457] gi|237790255|gb|EEP64465.1| thymidylate kinase [Brucella abortus str. 2308 A] gi|260096742|gb|EEW80617.1| thymidylate kinase [Brucella abortus NCTC 8038] gi|260154015|gb|EEW89107.1| thymidylate kinase [Brucella melitensis bv. 1 str. 16M] gi|260668269|gb|EEX55209.1| dTMP kinase [Brucella abortus bv. 4 str. 292] gi|260674836|gb|EEX61657.1| dTMP kinase [Brucella abortus bv. 6 str. 870] gi|260873277|gb|EEX80346.1| thymidylate kinase [Brucella abortus bv. 9 str. C68] gi|260915587|gb|EEX82448.1| dTMP kinase [Brucella abortus bv. 3 str. Tulya] gi|260920744|gb|EEX87397.1| thymidylate kinase [Brucella ceti B1/94] gi|261301067|gb|EEY04564.1| thymidylate kinase [Brucella neotomae 5K33] gi|261303305|gb|EEY06802.1| thymidylate kinase [Brucella pinnipedialis M163/99/10] gi|261738166|gb|EEY26162.1| thymidylate kinase [Brucella sp. F5/99] gi|261742050|gb|EEY29976.1| thymidylate kinase [Brucella suis bv. 5 str. 513] gi|262552593|gb|EEZ08583.1| thymidylate kinase [Brucella ceti M490/95/1] gi|262766025|gb|EEZ11814.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether] gi|263001861|gb|EEZ14436.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1] gi|263094155|gb|EEZ18077.1| thymidylate kinase [Brucella melitensis bv. 2 str. 63/9] gi|264660859|gb|EEZ31120.1| thymidylate kinase [Brucella pinnipedialis M292/94/1] gi|294821004|gb|EFG38003.1| thymidylate kinase [Brucella sp. NVSL 07-0026] gi|297175487|gb|EFH34834.1| thymidylate kinase [Brucella abortus bv. 5 str. B3196] gi|326409013|gb|ADZ66078.1| Thymidylate kinase [Brucella melitensis M28] gi|326538723|gb|ADZ86938.1| thymidylate kinase [Brucella melitensis M5-90] Length = 214 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|161618946|ref|YP_001592833.1| thymidylate kinase [Brucella canis ATCC 23365] gi|260566467|ref|ZP_05836937.1| thymidylate kinase [Brucella suis bv. 4 str. 40] gi|189028828|sp|A9MB09|KTHY_BRUC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|161335757|gb|ABX62062.1| thymidylate kinase [Brucella canis ATCC 23365] gi|260155985|gb|EEW91065.1| thymidylate kinase [Brucella suis bv. 4 str. 40] Length = 214 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 99/213 (46%), Positives = 145/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSGRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|239831999|ref|ZP_04680328.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301] gi|239824266|gb|EEQ95834.1| thymidylate kinase [Ochrobactrum intermedium LMG 3301] Length = 218 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 99/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL + L+ +D +TREPGG+P AEA RHV+LS +++ Sbjct: 6 SGLFITFEGGEGAGKSTQIALLAKHLRASGFDPVITREPGGSPGAEAIRHVILSGNAEKY 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+++LCDRF+DSS AYQG + ++ +++ Sbjct: 66 GPAMEALLFAAARADHVDQLIRPALDEGRVVLCDRFIDSSRAYQGVTGNLDSTYMSAVER 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ +MPD TIILD+P + GL R R R S D FE++D+ +HE RRQ FL IA Sbjct: 126 IAIDGIMPDMTIILDIPAEKGLSRAGKR---RGSETADRFEKEDIAVHEARRQAFLAIAE 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++ + ++A+ I + ++++R Sbjct: 183 AEPRRCKVIGADRPQDAIASEIAREIDSVLKER 215 >gi|261218666|ref|ZP_05932947.1| thymidylate kinase [Brucella ceti M13/05/1] gi|261321836|ref|ZP_05961033.1| thymidylate kinase [Brucella ceti M644/93/1] gi|260923755|gb|EEX90323.1| thymidylate kinase [Brucella ceti M13/05/1] gi|261294526|gb|EEX98022.1| thymidylate kinase [Brucella ceti M644/93/1] Length = 214 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + + I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKITDEIRSVVDTILTEK 211 >gi|58336718|ref|YP_193303.1| thymidylate kinase [Lactobacillus acidophilus NCFM] gi|73920822|sp|Q5FM02|KTHY_LACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58254035|gb|AAV42272.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus NCFM] Length = 216 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + +L + VTREPGG+ AE R ++L D+ Sbjct: 2 KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + EA+++AAAR HVE +I+PA+ EGK++ DRF+DSS AYQG+ + + Sbjct: 62 MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGL R++ +E D E++D+ H+K + FL + Sbjct: 122 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + PDR ++++ V ++ + + + K Sbjct: 178 KMYPDRFVVINATQPIDQVVKQVVTELKQRLPK 210 >gi|260761774|ref|ZP_05874117.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59] gi|260672206|gb|EEX59027.1| dTMP kinase [Brucella abortus bv. 2 str. 86/8/59] Length = 214 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 98/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AE RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|229592102|ref|YP_002874221.1| thymidylate kinase [Pseudomonas fluorescens SBW25] gi|259494277|sp|C3K0M9|KTHY_PSEFS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229363968|emb|CAY51499.1| thymidylate kinase [Pseudomonas fluorescens SBW25] Length = 210 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R VLL+ G ++ Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAERLRSEGIEVVLTREPGGTPLAERIREVLLAPGEEQM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G +++CDRF DS+YAYQG + +L+ Sbjct: 62 NPDTELLLVFAARAQHLAEVIRPALARGAVVICDRFTDSTYAYQGGGRGLSLARIATLET 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE + + R FL A Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARASAR------GRLDRFELEGQAFFDAVRTAFLTRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P+R +++D+A V I ++ L+++ Sbjct: 176 AEPERYYLLDAAQPLAHVQQAIDALLPTLLER 207 >gi|163843261|ref|YP_001627665.1| thymidylate kinase [Brucella suis ATCC 23445] gi|189028829|sp|B0CGE4|KTHY_BRUSI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|163673984|gb|ABY38095.1| thymidylate kinase [Brucella suis ATCC 23445] Length = 214 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 100/213 (46%), Positives = 146/213 (68%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKLIDADRSQEKIADEIRSVVDTILTEK 211 >gi|313499927|gb|ADR61293.1| Tmk [Pseudomonas putida BIRD-1] Length = 210 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 124/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE++ E RQ +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P R ++D+A S ++V +I ++ ++++ Sbjct: 176 SAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207 >gi|218885132|ref|YP_002434453.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226732655|sp|B8DN41|KTHY_DESVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218756086|gb|ACL06985.1| dTMP kinase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 215 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 116/215 (53%), Gaps = 1/215 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG+EG+GK+T ++ +++ L + V +TREPGG+ R +LL D+ Sbjct: 1 MFITFEGMEGSGKSTALNRVQQVLLDAGHGVLLTREPGGSRLGRTLRSILLDLSNDDIVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV VIRPAL EG ++L DR+ DS+ YQG L L +++ Sbjct: 61 EAELFLYLADRAQHVGQVIRPALDEGVVVLSDRYADSTVVYQGYGRGLDPERLRELNDMA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V + PD T++ DLP + GL+R R ++ + FE + + H + R+ +L A Sbjct: 121 VGGLWPDLTLVFDLPPEEGLRRAMTRNLREGTSVSEGRFEAEHLAFHARVREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 P R +VD+ + V +++ V ++ P Sbjct: 181 HPARFRVVDATRTPDEVFEDVMRAVRSVLSAPARP 215 >gi|163847788|ref|YP_001635832.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl] gi|222525656|ref|YP_002570127.1| dTMP kinase [Chloroflexus sp. Y-400-fl] gi|163669077|gb|ABY35443.1| dTMP kinase [Chloroflexus aurantiacus J-10-fl] gi|222449535|gb|ACM53801.1| dTMP kinase [Chloroflexus sp. Y-400-fl] Length = 226 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 73/227 (32%), Positives = 120/227 (52%), Gaps = 6/227 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T L LQ Y +TREPGGT +E R +L+ Sbjct: 1 MKQGFFITFEGPEGAGKSTQARRLYERLQSIGYPTILTREPGGTRISELIRRILVDLRHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++F+AAR V +IRP L G I++CDR+ DS++AYQG L ++ Sbjct: 61 EMAPTTEILLFSAARAQLVSELIRPYLATGGIVVCDRYADSTFAYQGYGLGRDLEELRTI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDVMIHEKRRQ 175 +I+ + PD T+ L + V++GL+R + E + + + +D+ H++ Q Sbjct: 121 TDIATGGLKPDLTLYLRIDVEVGLQRKRASRERIEPGSVQPPEWNRLDARDLAYHQRVAQ 180 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 F ++ +P+R + +D+ +A I +V + +V PL+++ Sbjct: 181 GFNELMAQEPERWYALDADQPVDELAEQIWQVVMARLA-QVMPLAAQ 226 >gi|312868193|ref|ZP_07728393.1| dTMP kinase [Streptococcus parasanguinis F0405] gi|311095938|gb|EFQ54182.1| dTMP kinase [Streptococcus parasanguinis F0405] Length = 212 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G ISFEG EGAGK++ + + L+ K TREPGG AE R V+L Sbjct: 1 MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL GK++L DRF+DSS AYQG ++ L Sbjct: 61 SMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE----REVNRLDLEGLELHQKVRQGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +D++ SF++V ++L ++ + Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVLENRL 208 >gi|229823580|ref|ZP_04449649.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271] gi|229787024|gb|EEP23138.1| hypothetical protein GCWU000282_00878 [Catonella morbi ATCC 51271] Length = 210 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 122/210 (58%), Gaps = 3/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG +GAGK++ I+ L +L+ + + V TREPGG P AE R V+L Sbjct: 1 MFPGKFITLEGPDGAGKSSVIAELTAYLEGQGHQVLTTREPGGVPIAEEIRRVILDVDHI 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++FAAAR H+ VI PAL +GKI+LCDRF+DSS AYQG + S+ Sbjct: 61 AMDPRTEALLFAAARRQHLVEVILPALRQGKIVLCDRFVDSSLAYQGMARDIPVDLIWSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +V++ +P T+++D+P ++GL R+ + R D +++ + H + RQ FLD+ Sbjct: 121 NQFAVEDQLPALTLLIDVPAEVGLARI---HQARGQRQYDRLDQESLDFHNRVRQAFLDL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ P+R ++D V ++++ + Sbjct: 178 AQASPERIKVIDGQAPLDQVVAACIDVLHQ 207 >gi|313885558|ref|ZP_07819308.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8] gi|312619288|gb|EFR30727.1| dTMP kinase [Eremococcus coleocola ACS-139-V-Col8] Length = 212 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 125/208 (60%), Gaps = 4/208 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFIS EG +G+GK++ I L L + +D+ +TREPGG+P AE R V+L Sbjct: 3 KNGLFISIEGPDGSGKSSAIQGLATRLSQDGFDLVLTREPGGSPIAEQIRQVILDVNNTA 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R H+++ I PAL GK+++ DRF+DSS AYQG + + ++ Sbjct: 63 MDPMTEALLYAAGRRQHLKDTILPALAAGKVVISDRFVDSSLAYQGVGRNLSQTDIWNIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++Q +PD T++LD+P ++GLKR+ Y R D +++D+ H K RQ FLD+A Sbjct: 123 QYAIQGHLPDITLLLDVPAEVGLKRI---YQARNQRQFDRLDQEDLSFHNKVRQAFLDLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 +Q DR H++D+ + V + ++ Sbjct: 180 ADQ-DRIHVIDARQAVDQVVEDAFQVLK 206 >gi|227903280|ref|ZP_04021085.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796] gi|227868909|gb|EEJ76330.1| thymidylate (dTMP) kinase [Lactobacillus acidophilus ATCC 4796] Length = 220 Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + +L + VTREPGG+ AE R ++L D+ Sbjct: 6 KGYFVSFEGPDGAGKSTVLKEVLAEIAPQLKTQYLVTREPGGSKIAEKIRDIILDPANDK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + EA+++AAAR HVE +I+PA+ EGK++ DRF+DSS AYQG+ + + Sbjct: 66 MDPKTEALLYAAARSQHVEEIIKPAINEGKVVFSDRFVDSSLAYQGQGRDLGIAKVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGL R++ +E D E++D+ H+K + FL + Sbjct: 126 DFATDKLDPDLTFFLDIAPEIGLSRIKKLRPAQE----DRLEQEDIAFHQKVYEGFLKVI 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + PDR ++++ V ++ + + + K Sbjct: 182 KMYPDRFVVINATQPIDQVVKQVVTELKQRLPK 214 >gi|149182688|ref|ZP_01861155.1| thymidylate kinase [Bacillus sp. SG-1] gi|148849598|gb|EDL63781.1| thymidylate kinase [Bacillus sp. SG-1] Length = 214 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG EGAGK+T I + L K ++V +TREPGG AE R V+L Sbjct: 1 MKQGLFITVEGPEGAGKSTIIKKMADELTEKGHEVILTREPGGITIAEEIREVILDPKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H+ + P+L +G I+LCDRFLDSS AYQG + S+ Sbjct: 61 AMDERTEALLYAAARRQHLAEKVIPSLDKGSIVLCDRFLDSSLAYQGHARGIGMEEVYSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ + MPD T+ D+ +IGL+R+ + ++ + + + HE+ R+ +L + Sbjct: 121 NKFAIGDTMPDITLYFDVEPEIGLERISA----HKGREVNRLDLETIDFHERVREGYLML 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R +D++ SF V N L I+ + + +R Sbjct: 177 LEKFPERIKKIDASASFGEVYQNALKIIEKYIDER 211 >gi|148549001|ref|YP_001269103.1| thymidylate kinase [Pseudomonas putida F1] gi|166223106|sp|A5W709|KTHY_PSEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148513059|gb|ABQ79919.1| thymidylate kinase [Pseudomonas putida F1] Length = 210 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLTPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAVLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE++ E RQ +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A S ++V +I ++ ++++ Sbjct: 176 GAPQRYSLLDAAQSLEAVQRDIDALLPGILER 207 >gi|222086013|ref|YP_002544545.1| thymidylate kinase [Agrobacterium radiobacter K84] gi|221723461|gb|ACM26617.1| thymidylate kinase [Agrobacterium radiobacter K84] Length = 227 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 109/210 (51%), Positives = 146/210 (69%), Gaps = 2/210 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF+SFEG EGAGK+T I L +L+ +DV VTREPGG+P AEA RHVLLS + F Sbjct: 5 TGLFVSFEGGEGAGKSTQIRRLAAWLRELGHDVLVTREPGGSPGAEAVRHVLLSGAAEMF 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAI+FAAAR DHVE +IRPAL G I+LCDRF+DSS YQG + + F+++LQ Sbjct: 65 GTRMEAILFAAARNDHVEEIIRPALAHGTIVLCDRFMDSSRVYQGITGNLEPDFIEALQR 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V V+PDCT+ILD+P ++GL+R + R S A D FE++++ HEKRR+ FLDIA Sbjct: 125 VAVNGVVPDCTLILDIPAELGLERARKRASAD--AAPDRFEKEELQTHEKRREAFLDIAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDRCH+VD+ +A I I+ + + Sbjct: 183 RDPDRCHVVDAQRGEDVIADEIAAIIEKRL 212 >gi|254719070|ref|ZP_05180881.1| thymidylate kinase [Brucella sp. 83/13] gi|306840480|ref|ZP_07473239.1| thymidylate kinase [Brucella sp. BO2] gi|306289495|gb|EFM60713.1| thymidylate kinase [Brucella sp. BO2] Length = 211 Score = 265 bits (679), Expect = 3e-69, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILAEK 208 >gi|310639487|ref|YP_003944245.1| thymidylate kinase [Paenibacillus polymyxa SC2] gi|309244437|gb|ADO54004.1| Thymidylate kinase [Paenibacillus polymyxa SC2] Length = 215 Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 122/217 (56%), Gaps = 9/217 (4%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G+FI+ EG +G+GKTT I L ++++ + + V TREPGG +E R ++L Sbjct: 1 MNRKGIFITLEGGDGSGKTTMIQRLAKYMEEEGHPVVTTREPGGIEISEKIRSIILDPAH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AAAR H+ ++PA+ +G I+LCDRF+DSS YQG + S Sbjct: 61 TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +V + PD T LD+ ++GL R+ +D + + + H K R+ +L+ Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARINA----SRGEEMDRLDMESISFHHKVREAYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +AR P+R IVD++ + + V ++ +L++KR Sbjct: 177 LARKFPERITIVDASPAPEQVEQ----VLKDLLKKRF 209 >gi|292493122|ref|YP_003528561.1| thymidylate kinase [Nitrosococcus halophilus Nc4] gi|291581717|gb|ADE16174.1| thymidylate kinase [Nitrosococcus halophilus Nc4] Length = 213 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FIS EGIEGAGK+T + +++ L+ V VTREPGGTP E R +LL+ ++ Sbjct: 1 MGRGCFISVEGIEGAGKSTQLKFIQQLLESAGKAVTVTREPGGTPLGEQIRTLLLTPRLE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE E ++ AAR++HV VI PAL G+ +LCDRF +SYAYQG +++L Sbjct: 61 GMSAETELLLMFAARVEHVRQVISPALARGRWVLCDRFTGASYAYQGGGRGLPLARIEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ + PD T++LD+PV +GL+R +R D FE++ E R+ +L + Sbjct: 121 EHWALNHLRPDLTLLLDVPVGVGLQRAASRRQ-----QPDRFEQEQAGFFECVRKAYLSL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ + D ++D++ V I ++ ++ Sbjct: 176 AKERVDEFRLIDASMPLPEVQEAIQQVIMAFIE 208 >gi|239908616|ref|YP_002955358.1| thymidylate kinase [Desulfovibrio magneticus RS-1] gi|259494267|sp|C4XNX1|KTHY_DESMR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|239798483|dbj|BAH77472.1| thymidylate kinase [Desulfovibrio magneticus RS-1] Length = 209 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 115/209 (55%), Gaps = 1/209 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEG+EG+GK+T ++ L L+ V TR+PGG + R +LLS Sbjct: 1 MFVTFEGVEGSGKSTQMTRLCAALEAAGRTVCRTRQPGGCFLGQTLRAILLSQKTAGLDD 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A R HV VIRPAL G++++CDR+ DS+ AYQG L +L ++ Sbjct: 61 RAELFLYLADRAQHVAEVIRPALAAGQVVVCDRYTDSTVAYQGYGRGLDTTLLQNLNAVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V+PD T++LDL IGL R +R + + FE + + H++ R + +A Sbjct: 121 AAGVVPDLTVLLDLDPAIGLTRATSRNAAAGTAEAEGRFEAERLEFHQRVRAGYRALAAA 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R ++D+A S +VA + +V +L+ Sbjct: 181 EPARFAVIDAAPSPDAVAEAVWGVVGKLL 209 >gi|23501873|ref|NP_698000.1| thymidylate kinase [Brucella suis 1330] gi|254704286|ref|ZP_05166114.1| thymidylate kinase [Brucella suis bv. 3 str. 686] gi|23347812|gb|AAN29915.1| thymidylate kinase [Brucella suis 1330] Length = 211 Score = 265 bits (678), Expect = 4e-69, Method: Composition-based stats. Identities = 97/211 (45%), Positives = 144/211 (68%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRPAL EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPALAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|296876048|ref|ZP_06900104.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912] gi|296432959|gb|EFH18750.1| thymidylate kinase [Streptococcus parasanguinis ATCC 15912] Length = 212 Score = 264 bits (677), Expect = 4e-69, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G ISFEG EGAGK++ + + L+ K TREPGG AE R V+L Sbjct: 1 MVNGTLISFEGPEGAGKSSVLEAVLPLLEEKGIPFITTREPGGVDIAEKIRQVILDPDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL GK++L DRF+DSS AYQG ++ L Sbjct: 61 RMDAKTELLLYIASRRQHLVERVLPALAAGKVVLMDRFIDSSVAYQGYGRGLSVEDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKNQE----REVNRLDLEGLELHQKVRQGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +D++ SF++V ++L ++ + Sbjct: 177 YEKEPERIVKIDASQSFEAVFADVLAVLETRL 208 >gi|330722496|gb|EGH00323.1| Thymidylate kinase [gamma proteobacterium IMCC2047] Length = 216 Score = 264 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 127/214 (59%), Gaps = 6/214 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+FI+ EGIEG GKTT+++ ++++LQ D+ VTREPGGTP AE R +LL+ + Sbjct: 4 QAGVFITVEGIEGVGKTTNMAFIQQYLQALGVDLTVTREPGGTPLAEEIRGLLLNNRDEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR H+ +I+P L +G +L DRF D++YAYQG + +L+ Sbjct: 64 LNNDAELLLVFAARAQHLGQLIKPTLAQGGWVLSDRFTDATYAYQGGGRELSMEMIANLE 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++ P+ T++LD+PV++GL R R LD FER+ EK R +L A Sbjct: 124 QMVQGDLRPNLTLLLDVPVEVGLSRAGQR------GELDRFEREKQAFFEKVRHTYLQRA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +P+R +VD++ +V +I + + K+ Sbjct: 178 QAEPERFCVVDASQPLAAVQADIEVALRPFLVKQ 211 >gi|308271741|emb|CBX28349.1| Thymidylate kinase [uncultured Desulfobacterium sp.] Length = 216 Score = 264 bits (677), Expect = 5e-69, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 118/205 (57%), Gaps = 1/205 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GKTT I FL++K D +TREPGGT + R +LL + Sbjct: 11 MFITFEGIEGSGKTTQIRHAMEFLKQKGKDCLMTREPGGTITGQKIRSILLDPESNGMDP 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +++ A R +HV +I PAL GK +LCDR+ D++ AYQG LD L ++ Sbjct: 71 STELLLYFADRAEHVNKIINPALSAGKTVLCDRYYDATKAYQGFARGLNMDLLDRLHKLI 130 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 + ++ PD TI+LDL GL R + + + A ++ FE++ + H+K R +L++AR Sbjct: 131 IHDLKPDITILLDLDPKTGLSRAWKQINEGQRAGVETRFEKETLDFHDKVRNGYLELARI 190 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + R I+D+++ V +I+ + Sbjct: 191 EAKRFKIIDASNDENQVKKDIIKAL 215 >gi|261317627|ref|ZP_05956824.1| thymidylate kinase [Brucella pinnipedialis B2/94] gi|261296850|gb|EEY00347.1| thymidylate kinase [Brucella pinnipedialis B2/94] Length = 214 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 99/213 (46%), Positives = 144/213 (67%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + + Sbjct: 2 SGLFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ Sbjct: 62 GPAMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ MPD T++LD+ GL R R R S D FE++D+ +HE RRQ FL+IAR Sbjct: 122 IAIDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIAR 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P RC ++D+ S + +A I ++V ++ ++ Sbjct: 179 QEPARCKVIDADRSQEKIADEIRSVVDTILTEK 211 >gi|308066851|ref|YP_003868456.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681] gi|305856130|gb|ADM67918.1| Thymidylate kinase (dTMP kinase) [Paenibacillus polymyxa E681] Length = 215 Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 123/217 (56%), Gaps = 9/217 (4%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G+FI+ EG +G+GKTT I L +F++ + Y V TREPGG +E R ++L Sbjct: 1 MNRKGIFITLEGGDGSGKTTMIQRLAKFMEEEGYPVITTREPGGIEISEKIRSIILDPAH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AAAR H+ ++PA+ +G I+LCDRF+DSS YQG + S Sbjct: 61 TSMDARTEALLYAAARRQHLVEKVKPAIEQGAIVLCDRFVDSSLVYQGFARGIGIEEVAS 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +V + PD T LD+ ++GL R+ A +D + + + H K R+ +L+ Sbjct: 121 INRFAVDDWEPDATFYLDIEPELGLARINA----SRGAEMDRLDMESISFHHKVREAYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +AR P+R IVD++ + + V ++ +L++KR Sbjct: 177 LARKFPERITIVDASPAPEQVEQ----VLKDLLKKRF 209 >gi|303241047|ref|ZP_07327557.1| thymidylate kinase [Acetivibrio cellulolyticus CD2] gi|302591472|gb|EFL61210.1| thymidylate kinase [Acetivibrio cellulolyticus CD2] Length = 206 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 119/211 (56%), Gaps = 6/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT I L++ +L+ K ++V VTREPGGT E R ++L Sbjct: 1 MKRGLFITTEGTDGSGKTTQIKLIESYLKGKGFEVVVTREPGGTSIGEKIRSIILDTENS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++A+AR V +I+P+L EGK+++CDRF+DSSY YQG + ++ + Sbjct: 61 DMAYITEMMLYASARAQLVNELIKPSLSEGKVVICDRFIDSSYVYQGFGRNIDIELIERV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I++ +MPD T+ D+ ++ L+R +S D ER+ + H K + + Sbjct: 121 NRIALDGIMPDVTLFFDIDPEVALER------RIQSTGADRIEREAMDFHRKVYNGYKKL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A PDR ++S + + + +++ + + Sbjct: 175 ASMYPDRIKAIESNRNIEEIFSDVKAYLDKF 205 >gi|240850633|ref|YP_002972033.1| thymidylate kinase [Bartonella grahamii as4aup] gi|240267756|gb|ACS51344.1| thymidylate kinase [Bartonella grahamii as4aup] Length = 214 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 96/215 (44%), Positives = 139/215 (64%), Gaps = 2/215 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG +G GKT ISLL L + YDV TREPGGT AEA RH+LLS ++ Sbjct: 2 SGYFITFEGGDGVGKTVQISLLAESLSHQGYDVVTTREPGGTLGAEAIRHILLSGQAQQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++F AAR+DHV VI P+L +GKI+LCDRF+DS+ YQG D+ L L+ Sbjct: 62 GPLIEAVLFTAARVDHVTEVIAPSLQKGKIVLCDRFIDSTRVYQGLNDTVSSSLLAVLEC 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ ++P T +LD+P G+KR R +E+ +DYFE+ + + E+RRQ FL +A+ Sbjct: 122 IALNGILPHLTFLLDMPAMCGMKRANLR--RKETEEIDYFEKDQLEVQEQRRQAFLQLAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P R ++D+ S ++VA I NI +++ ++S Sbjct: 180 QEPHRFRVIDATGSVEAVAHQIKNICHQVLLDKLS 214 >gi|221632235|ref|YP_002521456.1| thymidylate kinase [Thermomicrobium roseum DSM 5159] gi|254808313|sp|B9KXL4|KTHY_THERP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221155655|gb|ACM04782.1| thymidylate kinase [Thermomicrobium roseum DSM 5159] Length = 210 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 123/214 (57%), Gaps = 8/214 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKTT +LL L+ Y + VTREPGGTP E R LL+ + E Sbjct: 4 FITFEGPEGAGKTTQCALLAARLREAGYSLLVTREPGGTPLGETIREWLLAG--EALRPE 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++F AAR +HV + IRPAL G I+LCDR++DS+ AYQG +L L I+ Sbjct: 62 TEALLFTAARAEHVWDRIRPALERGTIVLCDRYVDSTLAYQGAGRGLDEGWLRELHRIAT 121 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 ++ PD TI+LD+PV++GL +A + +++++ H + R + A+ P Sbjct: 122 GDLWPDLTILLDVPVEVGLA-----RRRAAAATITRLDQEELAFHRRVRAWYHAAAQRDP 176 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK-RVSP 218 R +VD+ + VA + V E++++ R SP Sbjct: 177 QRWRVVDATLPPEVVADAVWATVTEVMKRGRRSP 210 >gi|330962619|gb|EGH62879.1| thymidylate kinase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 210 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 126/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAARLRAQGVEVLLTREPGGTPLAERVRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ AR Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRTTYLNRAR 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD++ + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDASQTLAQVQASLDTLLPQLLE 206 >gi|239929816|ref|ZP_04686769.1| integral membrane protein with kinase activity [Streptomyces ghanaensis ATCC 14672] gi|291438148|ref|ZP_06577538.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672] gi|291341043|gb|EFE67999.1| thymidylate kinase [Streptomyces ghanaensis ATCC 14672] Length = 966 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 507 SGFFIALEGGDGAGKSTQAEALAEWIRSKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 566 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +H++ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 567 SHRAEALLYAADRAEHIDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARINR 626 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 627 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRAGFLTLAA 678 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T I + + +++ Sbjct: 679 ADPGRYLVVDAGQEPEAVTTVIRHRLDQVL 708 >gi|330966243|gb|EGH66503.1| thymidylate kinase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 210 Score = 264 bits (676), Expect = 6e-69, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VI PAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVICPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P+R +VD+A S V ++ ++ EL++ Sbjct: 176 AEPERYRLVDAAQSLADVQASLDKLLPELLE 206 >gi|222148589|ref|YP_002549546.1| thymidylate kinase [Agrobacterium vitis S4] gi|221735575|gb|ACM36538.1| thymidylate kinase [Agrobacterium vitis S4] Length = 221 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 108/215 (50%), Positives = 141/215 (65%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLF++FEG EGAGK+T I LL L+ + V +REPGG+P AEA RHVLLS + F Sbjct: 5 SGLFVTFEGGEGAGKSTQIRLLANALEALGFAVVTSREPGGSPCAEALRHVLLSGAAEPF 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E EAI+FAAAR DHVE +RPAL+ G ++LCDRF+DSS YQG + F++ LQ Sbjct: 65 GVEMEAILFAAARNDHVEARLRPALLRGDMVLCDRFMDSSRVYQGATGNLSSAFIERLQA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+V V+PD TIILDLP +IGL R +NR D FE++++ IHE+RR+ FL IAR Sbjct: 125 IAVDGVVPDLTIILDLPANIGLARAKNRAGALGEDAPDRFEKEEIAIHERRREAFLAIAR 184 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +P RC +VD+ + +A I V L+ V Sbjct: 185 AEPARCRVVDARAGIEQIAEEIFAAVKPLLPHNVG 219 >gi|294630603|ref|ZP_06709163.1| thymidylate kinase [Streptomyces sp. e14] gi|292833936|gb|EFF92285.1| thymidylate kinase [Streptomyces sp. e14] Length = 822 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 SSGFFIALEGGDGAGKSTQAEALADWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSQG 567 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 LSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 627 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 RWATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHARVRAGFLALA 679 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T + + + +++ Sbjct: 680 AADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 710 >gi|83311549|ref|YP_421813.1| thymidylate kinase [Magnetospirillum magneticum AMB-1] gi|82946390|dbj|BAE51254.1| Thymidylate kinase [Magnetospirillum magneticum AMB-1] Length = 212 Score = 264 bits (676), Expect = 7e-69, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 116/210 (55%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T + LL L+ + V TREPGG+ AEA R +L+ + + Sbjct: 5 RGRFITFEGGEGAGKSTQVRLLAESLRDEGLMVVTTREPGGSAGAEAIRALLVEGEPERW 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++ AAR DH+ + PAL G ++CDRF DS+ AYQG + SL Sbjct: 65 DGVTEALLHFAARRDHLVKTVWPALDRGAWVICDRFADSTLAYQGFGHGLDPDVIASLYR 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V PD T++LDLPV+ GL+R R D +ER + H++ RQ FL IA Sbjct: 125 VAVGHFAPDLTLVLDLPVEKGLERAGLR-----GGAEDRYERMGLGFHQRLRQGFLGIAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P RC ++D+ S V +I++ V + Sbjct: 180 ANPMRCAVIDATRSPDEVHGDIMSTVRARL 209 >gi|320159579|ref|YP_004172803.1| thymidylate kinase [Anaerolinea thermophila UNI-1] gi|319993432|dbj|BAJ62203.1| thymidylate kinase [Anaerolinea thermophila UNI-1] Length = 205 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG+GKTT I L FL+ + YDV TREPGGT ++ R VL++ Sbjct: 1 MFITFEGPEGSGKTTQIRLFAEFLRARGYDVLTTREPGGTEISDQIRAVLVNLRNTAMHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F AAR VE VIRPAL G ++L DR+ DS+ AYQG L L + + Sbjct: 61 RTEILLFQAARAQLVEQVIRPALSRGTLVLSDRYADSTLAYQGYGHGYPLEELRRLIDFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +LD+ GL+R Q + + D+ H++ R +L++AR + Sbjct: 121 TGGLIPDLTFLLDVNPAQGLERKQ------REGEWNRLDAYDLGFHQRVRAGYLEMARAE 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+ S + + ++I + + R Sbjct: 175 PHRWVVVDATQSIEVIQSDIRRCFEQRLAAR 205 >gi|297201354|ref|ZP_06918751.1| thymidylate kinase [Streptomyces sviceus ATCC 29083] gi|297147859|gb|EFH28761.1| thymidylate kinase [Streptomyces sviceus ATCC 29083] Length = 1065 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 508 AGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARINR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +I +R + D E + H + R FL +A Sbjct: 628 WATNGLVPHLTVLLDVSPEIARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V+T + + + +++ Sbjct: 680 ADPGRYLVVDAGQEPEAVSTVVRHRLDQML 709 >gi|319789392|ref|YP_004151025.1| thymidylate kinase [Thermovibrio ammonificans HB-1] gi|317113894|gb|ADU96384.1| thymidylate kinase [Thermovibrio ammonificans HB-1] Length = 206 Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T L +L + Y +TREPGGTPAAE R VLL + F Sbjct: 1 MFITFEGIEGCGKSTQARLTYEWLLDRGYTSVLTREPGGTPAAEKVREVLLKRWEERFPP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ AAR HVEN+I+PAL EG I++CDRF DS+ AYQ F+ L + Sbjct: 61 MAELFLYEAARAFHVENLIKPALQEGSIVICDRFTDSTLAYQSFGRGLSREFVALLNRKA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T+++DLPV+ +R+ + D E + + H + R+ FL IAR + Sbjct: 121 TGGLKPDLTLLIDLPVEEAFRRIAQKSR-------DRMESEPLEFHRRVREGFLSIAREE 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R ++D + V + ++ E ++ Sbjct: 174 PERVAVIDGRGTVSEVFERVKRVIEERLR 202 >gi|302383105|ref|YP_003818928.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264] gi|302193733|gb|ADL01305.1| thymidylate kinase [Brevundimonas subvibrioides ATCC 15264] Length = 208 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 84/213 (39%), Positives = 121/213 (56%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G FI+FEG EG GK+T ++LL L + DV TREPGG+P EA R +++S D Sbjct: 1 MSRGRFITFEGGEGTGKSTQVALLVDRLGARGRDVIRTREPGGSPGGEAIRSLVVSGSAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A E ++ AAR DH+E IRPAL G+ ++CDRF DSS AYQG ++ F+++L Sbjct: 61 RWSARTELLLMFAARSDHLERTIRPALEAGQWVVCDRFADSSRAYQGLAGGAETAFVEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V PD T+I DLP ++GL+R R FE K + H+ R+ F I Sbjct: 121 DAHVVGTNQPDLTLIFDLPAEVGLERALARAQGDT-----RFESKGLAFHQNLRRAFQTI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 AR P+RC ++D+ S V + V +++ Sbjct: 176 ARAHPERCRLIDATGSIDDVQARVWAAVEPVLE 208 >gi|226943614|ref|YP_002798687.1| thymidylate kinase [Azotobacter vinelandii DJ] gi|226718541|gb|ACO77712.1| thymidylate kinase [Azotobacter vinelandii DJ] Length = 211 Score = 264 bits (675), Expect = 8e-69, Method: Composition-based stats. Identities = 81/215 (37%), Positives = 118/215 (54%), Gaps = 6/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG EGAGK+T+ L L+ +V +TREPGGTP AE R +LL+ + Sbjct: 1 MSRGLFITLEGPEGAGKSTNRDYLAEGLRAAGREVVLTREPGGTPLAERIRELLLAPASE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR H+ VIRPAL+ G ++LCDRF D+SYAYQG + L Sbjct: 61 PMAVDTELLLVFAARAQHLAGVIRPALVRGAVVLCDRFTDASYAYQGAGRGVPEARIAIL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ PD T++ DLPV++GL R R D FE++D E RQ +L Sbjct: 121 EHFVQGDLRPDLTLLFDLPVEVGLARAAAR------GRPDRFEQEDRAFFEAVRQAYLRR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A N R +VD+ V + ++ +L++ R Sbjct: 175 AANDSARYRVVDAGRPLAEVQRTLDGLLPQLLESR 209 >gi|62289916|ref|YP_221709.1| thymidylate kinase [Brucella abortus bv. 1 str. 9-941] gi|82699843|ref|YP_414417.1| thymidylate kinase [Brucella melitensis biovar Abortus 2308] gi|254689223|ref|ZP_05152477.1| thymidylate kinase [Brucella abortus bv. 6 str. 870] gi|254693708|ref|ZP_05155536.1| thymidylate kinase [Brucella abortus bv. 3 str. Tulya] gi|254701744|ref|ZP_05163572.1| thymidylate kinase [Brucella suis bv. 5 str. 513] gi|254706812|ref|ZP_05168640.1| thymidylate kinase [Brucella pinnipedialis M163/99/10] gi|254730256|ref|ZP_05188834.1| thymidylate kinase [Brucella abortus bv. 4 str. 292] gi|256031574|ref|ZP_05445188.1| thymidylate kinase [Brucella pinnipedialis M292/94/1] gi|256044653|ref|ZP_05447557.1| thymidylate kinase [Brucella melitensis bv. 1 str. Rev.1] gi|256061085|ref|ZP_05451240.1| thymidylate kinase [Brucella neotomae 5K33] gi|256113539|ref|ZP_05454365.1| thymidylate kinase [Brucella melitensis bv. 3 str. Ether] gi|256159712|ref|ZP_05457459.1| thymidylate kinase [Brucella ceti M490/95/1] gi|256254974|ref|ZP_05460510.1| thymidylate kinase [Brucella ceti B1/94] gi|256257473|ref|ZP_05463009.1| thymidylate kinase [Brucella abortus bv. 9 str. C68] gi|256369414|ref|YP_003106922.1| thymidylate kinase [Brucella microti CCM 4915] gi|260168705|ref|ZP_05755516.1| thymidylate kinase [Brucella sp. F5/99] gi|62196048|gb|AAX74348.1| Tmk, thymidylate kinase [Brucella abortus bv. 1 str. 9-941] gi|82615944|emb|CAJ10967.1| Thymidylate kinase:ATP/GTP-binding site motif A (P-loop) [Brucella melitensis biovar Abortus 2308] gi|255999574|gb|ACU47973.1| thymidylate kinase [Brucella microti CCM 4915] Length = 211 Score = 264 bits (675), Expect = 9e-69, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|296445855|ref|ZP_06887807.1| thymidylate kinase [Methylosinus trichosporium OB3b] gi|296256683|gb|EFH03758.1| thymidylate kinase [Methylosinus trichosporium OB3b] Length = 238 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 91/208 (43%), Positives = 126/208 (60%), Gaps = 2/208 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+ EG EGAGK+T + LL+ L + + TREPGG+P AEA R LL Sbjct: 16 HPGRFITLEGGEGAGKSTQMRLLQERLAERGVEAIATREPGGSPHAEALREALLGGKAAP 75 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G EAI+F+AAR+DH++ +I+PAL G ++CDRF DS+ AYQG R + L+ Sbjct: 76 LGPLGEAILFSAARIDHLDRLIKPALARGAWVICDRFADSTRAYQGARGGVDARLITLLE 135 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ PD TIILD+P +IGL+R R ES D FER+ + HE R+ FLDIA Sbjct: 136 RVALLGAKPDLTIILDIPAEIGLERASRRRRPDES--PDRFEREGLAFHEGLRRAFLDIA 193 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 +P+RC +VD+ + VA I +IV Sbjct: 194 AGEPERCCVVDARAPEREVAQAIWHIVE 221 >gi|28870981|ref|NP_793600.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000] gi|38257966|sp|Q87YH1|KTHY_PSESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28854230|gb|AAO57295.1| thymidylate kinase [Pseudomonas syringae pv. tomato str. DC3000] gi|331019150|gb|EGH99206.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 210 Score = 263 bits (674), Expect = 9e-69, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A S V ++ ++ EL++ Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206 >gi|325696293|gb|EGD38184.1| thymidylate kinase [Streptococcus sanguinis SK160] Length = 212 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL++ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKKYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GKI+L DRF+DSS AYQG +D L Sbjct: 61 AMDAKTELLLYIASRRQHLAERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVADIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|254714079|ref|ZP_05175890.1| thymidylate kinase [Brucella ceti M644/93/1] gi|254716864|ref|ZP_05178675.1| thymidylate kinase [Brucella ceti M13/05/1] Length = 211 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + + I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKITDEIRSVVDTILTEK 208 >gi|319654969|ref|ZP_08009043.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2] gi|317393394|gb|EFV74158.1| thymidylate kinase [Bacillus sp. 2_A_57_CT2] Length = 208 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT I +L L ++ Y V TREPGG AE R V+L Sbjct: 1 MKKGKFITVEGPEGAGKTTIIDMLASNLAKEGYQVLQTREPGGIEIAEQIRSVILDKNNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA+++AAAR H+ ++PA+ +G I+LCDRF+DSS AYQG + S+ Sbjct: 61 KMDPRTEALLYAAARRQHLAEKVKPAMDKGYIILCDRFIDSSLAYQGYARGLGIDEVYSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ +MP+ T+ D+ + GL R+ + ++ + + + H K R+ +L + Sbjct: 121 NSFAIEGMMPELTLYFDIEPEAGLDRINQ----HKGREVNRLDLEKLDFHHKVREGYLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +D++ + + V + + E++ Sbjct: 177 MELYPERIFKIDASGTLEEVYQQAESKLKEII 208 >gi|254697358|ref|ZP_05159186.1| thymidylate kinase [Brucella abortus bv. 2 str. 86/8/59] Length = 211 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 95/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AE RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAETIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ + GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAERGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|237800352|ref|ZP_04588813.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023209|gb|EGI03266.1| thymidylate kinase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 210 Score = 263 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSEESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIATLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV++GL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLAEVQASLDTLLPQLLE 206 >gi|331270648|ref|YP_004397140.1| thymidylate kinase [Clostridium botulinum BKT015925] gi|329127198|gb|AEB77143.1| thymidylate kinase [Clostridium botulinum BKT015925] Length = 210 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 116/209 (55%), Gaps = 4/209 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+ EG +G+GKTT + +++++L+ N D TREPGG +E R ++L Sbjct: 1 MNKGVFITLEGPDGSGKTTIVKMIEKYLKENNVDYISTREPGGINISEQIREIILDTKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A EA+++ A+R H+ + PAL GKI++CDRF+DSS AYQG + S+ Sbjct: 61 EMDARTEALLYVASRRQHLAERVIPALKLGKIVICDRFIDSSLAYQGYARGIGIDEVMSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ MP+ T+ LD+ +IGLKR+ + ++ + + + H+K R+ + + Sbjct: 121 NEFAIDGYMPNLTLYLDIEPEIGLKRISQNH----KREVNRLDLEKLDFHKKVREGYFKV 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 P+R +++ V ++ N + Sbjct: 177 LEKYPNRIKKINANQPIDKVFEDVKNYLK 205 >gi|182415140|ref|YP_001820206.1| dTMP kinase [Opitutus terrae PB90-1] gi|177842354|gb|ACB76606.1| dTMP kinase [Opitutus terrae PB90-1] Length = 216 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDE 61 +G ISFEG EG+GK+T +S+L LQ+ DV TREPGGT E R++++ DE Sbjct: 9 TGKLISFEGSEGSGKSTQMSMLAARLQKDGRDVVTTREPGGTEIGEQVRNIIVHNSRGDE 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E ++FAAAR V VI PA+ +G I+L DR+LDSS YQG + + + Sbjct: 69 MCAETELLLFAAARAQLVREVIAPAMQKGSIVLSDRYLDSSTVYQGIGRNLAADPVAQIN 128 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +V VMPD TI++D+P ++GL R++ R S D ER+++ ++K R +L +A Sbjct: 129 RFAVGNVMPDLTIVIDVPAEVGLARIRQRA----SDLPDRMERENIDFYKKVRDGYLVLA 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + DR ++D + V+ I V E + Sbjct: 185 KGMADRFVVIDGTQTQDVVSKKIFAAVKERL 215 >gi|297193021|ref|ZP_06910419.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486] gi|197719849|gb|EDY63757.1| thymidylate kinase [Streptomyces pristinaespiralis ATCC 25486] Length = 1039 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 114/211 (54%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 519 TSGFFIAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAG 578 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV++VIRPAL G I++ DR++DSS AYQG + + Sbjct: 579 LSNRAEALLYAADRAEHVDSVIRPALDRGAIVISDRYIDSSVAYQGAGRDLSPTEIARIS 638 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LD+ + +R + D E + H++ R FL +A Sbjct: 639 RWATDGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRSGFLTLA 690 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ SV T + + + +L+ Sbjct: 691 AADPGRYLVVDAGQEPGSVTTVVRHRLDQLL 721 >gi|325687059|gb|EGD29082.1| thymidylate kinase [Streptococcus sanguinis SK72] Length = 212 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVWPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|110833935|ref|YP_692794.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2] gi|123050570|sp|Q0VQM6|KTHY_ALCBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110647046|emb|CAL16522.1| dTMP kinase; thymidylate kinase [Alcanivorax borkumensis SK2] Length = 208 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 6/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG EGAGK++++ L L+ + V V+REPGGT AE+ R VLL+ + Sbjct: 2 SGRFITLEGGEGAGKSSNLVWLAEALRAEGKTVMVSREPGGTALAESIREVLLAPSNEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+E IRPAL G+ +LCDRFLD+++AYQG + +L+ Sbjct: 62 ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFLDATWAYQGAGRGLDSAAIAALEA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +++ PD TI+ D+PV++G+ R R A LD E++D ++ RQ +L A Sbjct: 122 LVIRDTRPDMTILFDVPVEVGMARAGKR------AALDRIEQEDRAFFDRIRQCYLARAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+R VD++ +SV + IV E+ Sbjct: 176 QEPNRFRTVDASQPLESVQQQLARIVEEM 204 >gi|23821779|sp|Q8UFA0|KTHY_AGRT5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 224 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 103/213 (48%), Positives = 144/213 (67%), Gaps = 2/213 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFISFEG EGAGK+T I L L+ + ++V VTREPGG+P AEA RHV+LS + Sbjct: 4 KTGLFISFEGGEGAGKSTQIRTLAEALRGRGFEVVVTREPGGSPGAEAVRHVILSGAAES 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL G+I+LCDRFLDSS YQG + + F+++LQ Sbjct: 64 FGVRMEAILFAAARNDHVEEVIRPALARGEIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I++ V+P+ T+I D+ + GL R + R E A D FE++++ HEKRR+ +LDIA Sbjct: 124 RIAIDGVVPELTLIFDIAAEKGLARARKR--ADEGATPDRFEKEEIETHEKRREAYLDIA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P RC IV++ V ++++ V L+++ Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214 >gi|167646661|ref|YP_001684324.1| thymidylate kinase [Caulobacter sp. K31] gi|167349091|gb|ABZ71826.1| dTMP kinase [Caulobacter sp. K31] Length = 208 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 85/212 (40%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEG EGAGK+T I L L+ DV +TREPGG+P AE R ++L+ VD Sbjct: 1 MTRGTFISFEGGEGAGKSTQIRRLAERLKADGADVVLTREPGGSPGAEQIRDLILNGHVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ A+R DHVE VIRPAL G I+LCDRF DS+ AYQG + + +L Sbjct: 61 RWSPITETLLMYASRRDHVERVIRPALERGAIVLCDRFADSTRAYQGAGGEAPIALIKAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E + +PD T+I D+P ++GL R R FE K + HE+ + FL+I Sbjct: 121 EEHVLGGTVPDLTLIFDIPAEVGLARALARGGEA------RFESKGLAFHERLGEAFLEI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 AR +P+RC ++++ + +V ++ V + Sbjct: 175 ARREPERCVVIEADDAIDAVWADVWGAVSARL 206 >gi|313891237|ref|ZP_07824855.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026] gi|313120304|gb|EFR43425.1| dTMP kinase [Streptococcus pseudoporcinus SPIN 20026] Length = 209 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M+ G I+FEG +GAGKT+ I L L+ N ++ VTREPGG AE+ R V+L Sbjct: 1 MSKGRLITFEGPDGAGKTSVIEGLVPLLENLNQTEIVVTREPGGVSIAESIREVILDVRN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL +G+++L DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEQGQMVLIDRFIDSSVAYQGAGRGLSKKAIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + V PD T+ DL +IGL R+ + ++ + + + +H++ R +L+ Sbjct: 121 LNDFATDGVTPDLTLYFDLSPEIGLARIAKN----KKREINRLDMEKIEMHQQVRNGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A+ PDR VD+ S V I+ E Sbjct: 177 LAKEFPDRIVTVDATKSLDEVVAQAFEIIKE 207 >gi|330952693|gb|EGH52953.1| thymidylate kinase [Pseudomonas syringae Cit 7] Length = 210 Score = 263 bits (673), Expect = 2e-68, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGIQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206 >gi|324993714|gb|EGC25633.1| thymidylate kinase [Streptococcus sanguinis SK405] gi|324994973|gb|EGC26886.1| thymidylate kinase [Streptococcus sanguinis SK678] gi|327462985|gb|EGF09306.1| thymidylate kinase [Streptococcus sanguinis SK1] gi|327474588|gb|EGF19993.1| thymidylate kinase [Streptococcus sanguinis SK408] Length = 212 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GKI+L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKIVLMDRFIDSSVAYQGYGRGLDVTDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|27379629|ref|NP_771158.1| thymidylate kinase [Bradyrhizobium japonicum USDA 110] gi|46576547|sp|Q89LM5|KTHY_BRAJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|27352781|dbj|BAC49783.1| thymydilate kinase [Bradyrhizobium japonicum USDA 110] Length = 228 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 93/219 (42%), Positives = 130/219 (59%), Gaps = 7/219 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EG GK+T I L L+ VTREPGG+P AE RH++LS Sbjct: 12 RGRFITFEGGEGTGKSTQIKKLADRLKAARMRTLVTREPGGSPGAEIMRHLVLSGMGKLL 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EAE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG S ++++Q Sbjct: 72 GPEAETLLFAAARDDHVHTVIEPALKQGIWVLCDRFADSTRAYQGSLGSVSPGLINAMQR 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ ++ PD TIILDLPV+IGL+R R R S D FE + + H+ R+ + IA Sbjct: 132 VTIGDLKPDLTIILDLPVEIGLQRAAAR---RGSGTPDRFEGEQLSFHQGLREAYRKIAA 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 ++P RC ++D+ +VA VW ++ R+ P + Sbjct: 189 DEPARCVLIDANSDPDTVAGR----VWSALRDRLLPTPA 223 >gi|125718521|ref|YP_001035654.1| thymidylate kinase [Streptococcus sanguinis SK36] gi|166223121|sp|A3CPJ9|KTHY_STRSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|125498438|gb|ABN45104.1| Thymidylate kinase, putative [Streptococcus sanguinis SK36] Length = 212 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|289770846|ref|ZP_06530224.1| integral membrane protein with kinase activity [Streptomyces lividans TK24] gi|289701045|gb|EFD68474.1| integral membrane protein with kinase activity [Streptomyces lividans TK24] Length = 1107 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T + + + +++ Sbjct: 680 ADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 709 >gi|253680847|ref|ZP_04861650.1| dTMP kinase [Clostridium botulinum D str. 1873] gi|253562696|gb|EES92142.1| dTMP kinase [Clostridium botulinum D str. 1873] Length = 210 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 115/209 (55%), Gaps = 4/209 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EG+GKTT + +++ +L+ N D TREPGG +E R ++L Sbjct: 1 MKKGVFITLEGPEGSGKTTIVKMIEGYLKENNIDYISTREPGGINISEQIREIILDRKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A EA+++ A+R H+ + PAL GKI++CDRF+DSS AYQG + S+ Sbjct: 61 EMDARTEALLYVASRRQHLSERVIPALKSGKIVICDRFIDSSLAYQGYARGIGIDEVMSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ MP+ T+ LD+ +IGLKR+ + ++ + + + H+K R+ + + Sbjct: 121 NEFAIDGYMPNLTLYLDIDPEIGLKRISEN----DKREVNRLDLEKLDFHKKVREGYFKV 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + P+R +++ V ++ N + Sbjct: 177 LKKFPNRIKKINANQPIDKVFEDVKNYLK 205 >gi|325690660|gb|EGD32661.1| thymidylate kinase [Streptococcus sanguinis SK115] Length = 212 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|296329529|ref|ZP_06872015.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672726|ref|YP_003864397.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153272|gb|EFG94135.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410969|gb|ADM36087.1| thymidylate kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 212 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILIAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ ++PAL +G ++LCDRF+DSS AYQG + S+ E Sbjct: 62 DPRTEALLYAAARRQHLVEKVKPALEQGHVVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++MP T+ + + GLKR+ S + + + + + H K R+ + ++ + Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIHANGSREK----NRLDLEKLSFHTKVREGYQELMK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R H VD++ S V ++L +V E ++K Sbjct: 178 RFPKRFHPVDASQSKDLVVQDVLKVVNEALKK 209 >gi|256786952|ref|ZP_05525383.1| integral membrane protein with kinase activity [Streptomyces lividans TK24] Length = 1063 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 464 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 523 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 524 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 583 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 584 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 635 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T + + + +++ Sbjct: 636 ADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 665 >gi|330878246|gb|EGH12395.1| thymidylate kinase [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 210 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 82/211 (38%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDESM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAGVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLNRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A S V ++ ++ EL++ Sbjct: 176 AEPARYRLVDAAQSLADVQASLDKLLPELLE 206 >gi|330810988|ref|YP_004355450.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379096|gb|AEA70446.1| dTMP kinase (thymidylate kinase) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 210 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L LQ +V +TREPGGTP AE R VLL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLQAAGIEVVLTREPGGTPLAERIREVLLAPIEEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G ++LCDRF DS+YAYQG + +L+ Sbjct: 62 NPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSVERIAALEA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE + R FL A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARASAR------GRLDRFELEGQAFFNAVRNAFLSRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A V ++ ++ L+++ Sbjct: 176 ADPARYLLIDAAQPLTQVQQSLDGLLPRLLER 207 >gi|302559329|ref|ZP_07311671.1| dTMP kinase [Streptomyces griseoflavus Tu4000] gi|302476947|gb|EFL40040.1| dTMP kinase [Streptomyces griseoflavus Tu4000] Length = 854 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +H++ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHIDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARINR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATDGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ +SV T I + + +++ Sbjct: 680 ADPGRYLVVDAGQEPESVTTVIRHRLDQVL 709 >gi|301060374|ref|ZP_07201237.1| dTMP kinase [delta proteobacterium NaphS2] gi|300445570|gb|EFK09472.1| dTMP kinase [delta proteobacterium NaphS2] Length = 212 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 110/208 (52%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T + L+R +TREPGGTP R +LLS G + Sbjct: 1 MFITFEGIEGCGKSTQAKRIAARLERAGVSCILTREPGGTPVGNDIRQILLSSGNRDLPP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A R H+ +V++PAL K +LCDRF D++ AYQG L E++ Sbjct: 61 LAELFLYEADRALHMASVVKPALAAKKWVLCDRFFDATTAYQGYARGQDLHMTARLNEMA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T +LD PV +GLKR R + A D FE++ HE R + ++A+ Sbjct: 121 SFGIKPDKTFLLDCPVSVGLKRALKRNAESRVAGQDRFEQEKTAFHEAVRHGYRELAKQN 180 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ + + +I + + + Sbjct: 181 PHRFVVVDATQTEVRLEADIFSCLRNHI 208 >gi|77460373|ref|YP_349880.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1] gi|123603687|sp|Q3K8L5|KTHY_PSEPF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77384376|gb|ABA75889.1| thymidylate kinase [Pseudomonas fluorescens Pf0-1] Length = 210 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ +V +TREPGGTP AE R VLL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVVLTREPGGTPLAERIREVLLAPVDEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G ++LCDRF DS+YAYQG + +L+ Sbjct: 62 NPDTELLLVFAARAQHLAEVIRPALARGAVVLCDRFTDSTYAYQGGGRGLSLERIAALET 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T+I DLPV+IGL R R LD FE + E R FL A Sbjct: 122 FVQGDLRPDLTLIFDLPVEIGLARASAR------GRLDRFELEGREFFEAVRNAFLKRAE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P R +D+ V ++ ++ L++ Sbjct: 176 DDPARYVRIDAGQPLVKVQQSLDTLIPNLLE 206 >gi|325275807|ref|ZP_08141675.1| thymidylate kinase [Pseudomonas sp. TJI-51] gi|324099059|gb|EGB97037.1| thymidylate kinase [Pseudomonas sp. TJI-51] Length = 210 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 121/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNRDYLAARLREHGLDVVLTREPGGTPLAEKVRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L++ Sbjct: 62 AADTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIATLEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ P T++ DLPV++GL R R LD FE++ + RQ +L A+ Sbjct: 122 FVQGDLRPQLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFQAVRQAYLQRAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R ++D+A +V I ++ +V++ Sbjct: 176 REPQRYSLLDAAQPLPAVQRAIDALLPAIVER 207 >gi|262283117|ref|ZP_06060884.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA] gi|262261369|gb|EEY80068.1| thymidylate kinase [Streptococcus sp. 2_1_36FAA] Length = 212 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL +S EG +GAGK++ + L L+ K V TREPGG P +EA R V+L Sbjct: 1 MKRGLLVSLEGPDGAGKSSVLEALVPILEAKGQQVVTTREPGGVPISEAIREVILDQNNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG ++ L Sbjct: 61 EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ ++ ++ + + + +H++ RQ +L Sbjct: 121 NQFATDGLKPDLTLYFDLDVEEGLARIAKN----KNREVNRLDLEGLEMHQRVRQGYLYS 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R +D++ + + V + L ++ + + + Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVLNQHLNSK 211 >gi|302187273|ref|ZP_07263946.1| thymidylate kinase [Pseudomonas syringae pv. syringae 642] Length = 210 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 125/211 (59%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQASLDTLLPQLLE 206 >gi|327481307|gb|AEA84617.1| thymidylate kinase [Pseudomonas stutzeri DSM 4166] Length = 210 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + Sbjct: 2 KGLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L+ Sbjct: 62 AVDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSLERIAQLET 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T+I DLPVD+GL R R LD FE++ + E R +L A+ Sbjct: 122 FVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D+ + +V ++ ++ EL+ Sbjct: 176 AAPSRYRVIDAGQALNAVQCDVEALIPELL 205 >gi|323351073|ref|ZP_08086730.1| thymidylate kinase [Streptococcus sanguinis VMC66] gi|322122797|gb|EFX94506.1| thymidylate kinase [Streptococcus sanguinis VMC66] Length = 212 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AE R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAETIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|311896975|dbj|BAJ29383.1| putative thymidylate kinase [Kitasatospora setae KM-6054] Length = 1055 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +GAGK+T L +++ K ++V +TREPGG+P + R ++L G Sbjct: 515 KGYFIALEGGDGAGKSTQAQALAEWIRAKGHEVVLTREPGGSPIGQRLRALVLDVGNTGL 574 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HVENVIRPAL G ++L DR++DSS AYQG + + Sbjct: 575 SHRAEALIYAADRAEHVENVIRPALERGAVVLTDRYMDSSIAYQGAGRDLAATEVARISR 634 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ R + LD E + H++ R FL +A Sbjct: 635 WATGGLVPDLTVVLDVDPTAARDRF--------TEALDRLESEPTEFHQRVRSGFLALAA 686 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD S +V T I + + + Sbjct: 687 ADPARYLVVDGTQSAAAVTTAIRHRLDREL 716 >gi|327470490|gb|EGF15946.1| thymidylate kinase [Streptococcus sanguinis SK330] Length = 212 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLAEQVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|157151481|ref|YP_001450818.1| thymidylate kinase [Streptococcus gordonii str. Challis substr. CH1] gi|189030844|sp|A8AYF8|KTHY_STRGC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157076275|gb|ABV10958.1| thymidylate kinase [Streptococcus gordonii str. Challis substr. CH1] Length = 212 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 116/215 (53%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL +S EG +GAGK++ + L L+ + + V TREPGG P +EA R V+L Sbjct: 1 MKRGLLVSLEGPDGAGKSSVLEALVPILEAQGHQVVTTREPGGVPISEAIREVILDQNNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG ++ L Sbjct: 61 EMDGKTELLLYIASRRQHLIEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ DL V+ GL R+ ++ ++ + + + +H++ RQ +L Sbjct: 121 NQYATDGLKPDLTLYFDLDVEEGLARIAKN----KNREVNRLDLEGLEMHQRVRQGYLYS 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R +D++ + + V + L ++ + + + Sbjct: 177 LEKDPERLVKIDASQALEDVVKDSLAVLNQHLNSK 211 >gi|297572230|ref|YP_003698004.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595] gi|296932577|gb|ADH93385.1| thymidylate kinase [Arcanobacterium haemolyticum DSM 20595] Length = 219 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 10/211 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FISFEG +GAGK+T + L +L+ Y V VTREPGGT RH+LL G + Sbjct: 2 GMFISFEGGDGAGKSTQVEKLATWLREAGYGVVVTREPGGTELGAHIRHLLLHGG--DVS 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R H++ IRPAL G+I++ DRF+DSS AYQG S + L Sbjct: 60 PRAEALLYAADRAHHMDTKIRPALERGEIVITDRFMDSSIAYQGAARSLGKNEIRDLSLW 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V+ MPD T +LD+PV+ G RV + D E H + R FL +A + Sbjct: 120 AVEGTMPDVTFLLDIPVETGQARV--------GSEQDRLEAAGAEFHARVRNEFLALAED 171 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 DR ++D + S+A +I + V E + K Sbjct: 172 HMDRWRVLDGTQTIDSIAQSIRHHVAEALAK 202 >gi|325292851|ref|YP_004278715.1| Thymidylate kinase [Agrobacterium sp. H13-3] gi|325060704|gb|ADY64395.1| Thymidylate kinase [Agrobacterium sp. H13-3] Length = 224 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 104/213 (48%), Positives = 143/213 (67%), Gaps = 2/213 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFISFEG EGAGK+T I L L+ + +DV VTREPGG+P AEA RHVLLS + Sbjct: 4 KTGLFISFEGGEGAGKSTQIRTLAEALRDRGFDVIVTREPGGSPGAEAVRHVLLSGAAES 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EAI+FAAAR DHVE VIRPAL G I+LCDRFLDSS YQG + + F+++LQ Sbjct: 64 FGVRMEAILFAAARNDHVEEVIRPALERGAIVLCDRFLDSSRVYQGTTGNLEPDFIETLQ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ V+P+ T+I D+ + GL R + R E A D FE++++ HEKRR+ +LDIA Sbjct: 124 RVAIDGVVPELTLIFDIAAEKGLARARKR--ADEGAAPDRFEKEEIETHEKRREAYLDIA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P RC IV++ V ++++ V L+++ Sbjct: 182 LAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 214 >gi|327490146|gb|EGF21934.1| thymidylate kinase [Streptococcus sanguinis SK1058] Length = 212 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALAQGKLVLMDRFIDSSVAYQGNGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|114330554|ref|YP_746776.1| dTMP kinase [Nitrosomonas eutropha C91] gi|122314450|sp|Q0AIL5|KTHY_NITEC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|114307568|gb|ABI58811.1| thymidylate kinase [Nitrosomonas eutropha C91] Length = 215 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 80/217 (36%), Positives = 120/217 (55%), Gaps = 7/217 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGI+GAGK+TH++ L FL+ K +V VTREPG T E R +LL Sbjct: 1 MQRGKFITFEGIDGAGKSTHLAWLASFLRDKGLEVIVTREPGSTALGEQLRQLLLDHR-Q 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE E ++ AAR +H++ VI PAL G ++ DRF D+S+AYQG L+ L Sbjct: 60 AMHAETETLLMFAARREHLDKVILPALERGAWVISDRFTDASFAYQGGGRGVPSARLEIL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T+ D+PV I +RVQ+ + D FE + + E+ RQ +L Sbjct: 120 EQWVQKGFSPDLTVYFDVPVTISRQRVQS------ARTADRFELEPDLFFERVRQAYLQR 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A+ +R +VD + S + V T ++ +V + + S Sbjct: 174 AKQFSERIRVVDGSLSLEEVRTAMVEVVEKFWSAQAS 210 >gi|21221961|ref|NP_627740.1| integral membrane protein with kinase activity [Streptomyces coelicolor A3(2)] gi|4539560|emb|CAB38479.1| integral membrane protein with kinase activity [Streptomyces coelicolor A3(2)] Length = 1089 Score = 262 bits (671), Expect = 3e-68, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 508 TGFFIALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVVSDRYIDSSVAYQGAGRDLSPTEIARINR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATNGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T + + + +++ Sbjct: 680 ADPGRYLVVDAGQEPEAVTTVVRHRLDQVL 709 >gi|330901144|gb|EGH32563.1| thymidylate kinase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 210 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+ + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAGQTLADVQASLDTLLPQLLE 206 >gi|85715533|ref|ZP_01046514.1| thymidylate kinase [Nitrobacter sp. Nb-311A] gi|85697728|gb|EAQ35604.1| thymidylate kinase [Nitrobacter sp. Nb-311A] Length = 230 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 3/211 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG EG+GK+T I +L L VTREPGG+P AE RH++LS Sbjct: 11 QRGRFITFEGGEGSGKSTQIKILAERLLAAKQHAIVTREPGGSPGAEIIRHLVLSGVGKL 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G +AE ++FAAAR DHV VIRPAL +G +LCDRF DS+ YQG+ + L++++ Sbjct: 71 LGVDAETLLFAAARDDHVRTVIRPALEQGVWVLCDRFADSTRVYQGQLGNVLPGVLNAME 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ ++ PD T+ILD+PV++GL+R R R S D FE +D+ H K R + +IA Sbjct: 131 RVTIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDLAFHRKLRDAYREIA 187 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 N P RC ++D+ +VA I + E + Sbjct: 188 ANDPQRCVVIDADTDLDTVAARIWAALRERM 218 >gi|323342269|ref|ZP_08082501.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463381|gb|EFY08575.1| thymidylate kinase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 207 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 118/208 (56%), Gaps = 6/208 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF+SFEG +G+GKTT ++ + ++KN V TREPGG +E R ++L +E Sbjct: 3 LFVSFEGPDGSGKTTITKIVSEYFEKKNQPVLCTREPGGIRISEKIRELILDPEHEEMDD 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R H+ I+PAL G++++CDRF+DSS AYQG + + + Sbjct: 63 RTEALLYAASRRQHLIEKIKPALGRGELVICDRFVDSSLAYQGYARGIGIDDVWDINMFA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + +PD TI LDL + GLKR+ R D E + + HEK Q + ++ R Sbjct: 123 IDGFLPDLTIFLDLKPEEGLKRIGVR------GYKDRLELEGDVFHEKVYQGYQEVIRRF 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R IVD+A S + VA +++ I+ + Sbjct: 177 PNRIKIVDAAQSIEDVAADVIKIIETQL 204 >gi|289671976|ref|ZP_06492866.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5] Length = 210 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+ + V ++ ++ +L++ Sbjct: 176 AEPARYRLVDAGQTLADVQDSLDTLLPQLLE 206 >gi|271970386|ref|YP_003344582.1| dTMP kinase [Streptosporangium roseum DSM 43021] gi|270513561|gb|ACZ91839.1| dTMP kinase [Streptosporangium roseum DSM 43021] Length = 688 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG EG+GKTT LL +L+ + +DV TREPG T R +LL Sbjct: 467 RGMFIAFEGGEGSGKTTQSRLLAIWLRDQGFDVVQTREPGSTKVGMRLRAILLDAVHQGL 526 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A +EA+++AA R +HVE VIRPAL G +++ DR++DSS AYQG + + + + Sbjct: 527 SARSEALLYAADRAEHVEKVIRPALYRGSMVISDRYVDSSLAYQGAGRALEPGDVARINA 586 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T+++D P +GL R+ D E + + HE+ R+ F +A Sbjct: 587 WATGGLVPDLTVLIDTPPSVGLTRL--------GGAADRIESEPLEFHERVRREFRSLAA 638 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +VD + + ++ I + V E++ Sbjct: 639 AAPERYLVVDGTLAQEQISLLIHDRVREVL 668 >gi|104780789|ref|YP_607287.1| thymidylate kinase [Pseudomonas entomophila L48] gi|166223104|sp|Q1ICY2|KTHY_PSEE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|95109776|emb|CAK14481.1| thymidylate kinase [Pseudomonas entomophila L48] Length = 210 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + Sbjct: 2 SGLFITLEGPEGAGKSTNREYLAARLREQGVDVVMTREPGGTPLAERIRELLLAPSEEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L+ Sbjct: 62 AVDTELLLMFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAILES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T++ DLPV++GL R R LD FE++ E RQ +L A Sbjct: 122 FVQGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRAG 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 QP R ++D+A +V I ++ ++++ Sbjct: 176 QQPQRYSLLDAAQPLAAVQRAIDALLPGILER 207 >gi|254710078|ref|ZP_05171889.1| thymidylate kinase [Brucella pinnipedialis B2/94] Length = 211 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 3/211 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EGAGK+T I+LL L+ +D +TREPGG+P AEA RHV+LS + +G Sbjct: 1 MFITFEGGEGAGKSTQIALLASHLRNHGFDPVITREPGGSPGAEAIRHVILSGNAETYGP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAAAR DHV+ +IRP L EG+I+LCDRF+DSS AYQG + ++ +++ I+ Sbjct: 61 AMEALLFAAARADHVDQLIRPTLAEGRIVLCDRFIDSSRAYQGVTGNLDATYMAAIERIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MPD T++LD+ GL R R R S D FE++D+ +HE RRQ FL+IAR + Sbjct: 121 IDGAMPDLTLVLDICAKRGLSRAGKR---RGSDTADRFEKEDIAVHEARRQAFLEIARQE 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P RC ++D+ S + +A I ++V ++ ++ Sbjct: 178 PARCKVIDADRSQEKIADEIRSVVDTILTEK 208 >gi|146282956|ref|YP_001173109.1| thymidylate kinase [Pseudomonas stutzeri A1501] gi|166223107|sp|A4VMR6|KTHY_PSEU5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145571161|gb|ABP80267.1| thymidylate kinase [Pseudomonas stutzeri A1501] Length = 210 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + Sbjct: 2 KGLFVTLEGPEGAGKSTNREYLAERLRARGLDVVLTREPGGTPLAERIRELLLTPADEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + L+ Sbjct: 62 AVDTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSLERIAQLET 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T+I DLPVD+GL R R LD FE++ + E R +L A Sbjct: 122 FVQGDLRPDLTLIFDLPVDVGLARAAAR------GRLDRFEQEGMRFFEAVRSAYLQRAE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D+ + +V ++ ++ EL+ Sbjct: 176 AAPSRYRVIDAGQALNAVQCDVEALIPELL 205 >gi|323701668|ref|ZP_08113340.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574] gi|323533441|gb|EGB23308.1| thymidylate kinase [Desulfotomaculum nigrificans DSM 574] Length = 215 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI FEG++G+GKTT +SLL ++L + + TREPGGTP E R +LL+ + Sbjct: 11 GIFIVFEGVDGSGKTTQLSLLNKYLCANHIATYATREPGGTPLGEKIRELLLNPDFIDMQ 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA+++AAAR V IRP L +G ++LCDR++DSS AYQG FL + ++ Sbjct: 71 SRTEALLYAAARAQLVAQEIRPRLQQGTVVLCDRYIDSSLAYQGYGRGMDIDFLIKINQL 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + P I+LDLP + GL R R+ D E + + H + R +L++AR Sbjct: 131 GTGGLNPQLVILLDLPPEEGLIR------SRKVGPADRLENEALDFHRRVRAGYLELARK 184 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR ++D+ S Q++ I +V +V Sbjct: 185 NPDRYLVLDARESIQTLHQEICRVVGGMV 213 >gi|300172669|ref|YP_003771834.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811] gi|299887047|emb|CBL91015.1| thymidylate kinase [Leuconostoc gasicomitatum LMG 18811] Length = 214 Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 119/216 (55%), Gaps = 5/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ + +L L+ ++ TREPGG P +EA R +L Sbjct: 1 MTKPLFITFEGPEGAGKTSVLEILISELKPLLGDELITTREPGGNPISEAIRAILQPAED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ +I PAL GK+++ DR++DSS AYQG + Sbjct: 61 NGMDERTEALLYTAARRQHLVEIILPALKSGKVVISDRYIDSSLAYQGGGRGLGVDNIWQ 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + +MPD TI D+P ++GL RV+ +D +++++ H+ RQ +L Sbjct: 121 INQFATEGLMPDLTIYFDVPPELGLARVKAN----RQGKIDRLDKENLSFHQTVRQTYLQ 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + DR I+D+A S V + ++ + ++ R Sbjct: 177 LQHDFSDRIKIIDAAQSLDQVVADTRELLLKTLKTR 212 >gi|256397499|ref|YP_003119063.1| thymidylate kinase [Catenulispora acidiphila DSM 44928] gi|256363725|gb|ACU77222.1| thymidylate kinase [Catenulispora acidiphila DSM 44928] Length = 901 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61 +G F+SFEG +G+GK+T + LL +L+ ++V VTREPGGTP R+++L D Sbjct: 496 TGTFLSFEGGDGSGKSTQLDLLADWLRGSGHEVVVTREPGGTPLGTKLRNIVLDAHNADV 555 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R DHVE V+RPAL G +++ DR++DSS AYQG + ++ L Sbjct: 556 ISPRAEALIYAADRADHVERVVRPALERGAVVITDRYVDSSLAYQGAGRALSAREVELLS 615 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + Q +MPD TI++DL +R D E + V H + R +L++A Sbjct: 616 QWATQGLMPDVTILMDLDPLEAARR--------RKTPADRLELESVDFHRRVRNRYLELA 667 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R ++++ + +A I + + Sbjct: 668 TAEPERFIVINAMEPIEQIAGRIRARLEGRI 698 >gi|307328251|ref|ZP_07607429.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113] gi|306886085|gb|EFN17093.1| thymidylate kinase [Streptomyces violaceusniger Tu 4113] Length = 1100 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI EG +G+GK+T + L +++ K ++V VTREPG T + R +LL Sbjct: 508 TGFFIVIEGGDGSGKSTQVEALAEWIRAKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLAATEIARISR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 628 WATNGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHQRVRSGFLALAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V + + + + +++ Sbjct: 680 ADPARYLVVDAGQLPEAVTSVVRHRLDQML 709 >gi|327462078|gb|EGF08407.1| thymidylate kinase [Streptococcus sanguinis SK1057] gi|328946592|gb|EGG40730.1| thymidylate kinase [Streptococcus sanguinis SK1087] Length = 212 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FL+ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLKNYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLAERVLPALSQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|170720716|ref|YP_001748404.1| thymidylate kinase [Pseudomonas putida W619] gi|259494278|sp|B1J4Z5|KTHY_PSEPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169758719|gb|ACA72035.1| dTMP kinase [Pseudomonas putida W619] Length = 207 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 122/210 (58%), Gaps = 6/210 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EGAGK+T+ L L+ + DV +TREPGGTP AE R +LL+ + A Sbjct: 1 MFITLEGPEGAGKSTNRDYLAARLREQGLDVVLTREPGGTPLAEKVRELLLAPSDEVMAA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L++ Sbjct: 61 DTELLLVFAARAQHLAQVIRPALARGAVVLCDRFTDATYAYQGGGRGLSVERIAALEQFV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 E+ PD T++ DLPV++GL R R LD FE++ E RQ +L AR + Sbjct: 121 QGELRPDLTLVFDLPVEVGLARAAAR------GRLDRFEQEGQAFFEAVRQAYLQRARRE 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+A ++V I ++ ++++ Sbjct: 175 PQRYDLLDAAQPLEAVQRAIDALLPGILER 204 >gi|300087976|ref|YP_003758498.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527709|gb|ADJ26177.1| thymidylate kinase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 207 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 110/213 (51%), Gaps = 7/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T LL L +TREPGGTP E +L + Sbjct: 1 MKQGKFITFEGCEGAGKSTQAGLLAGMLASNGMKTILTREPGGTPLGEEISRLLKWGKIG 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +E ++F A+R + V VI PAL GKI++CDRF DSS YQG + + Sbjct: 61 DIDALSELLLFNASRAELVFTVIEPALKAGKIVICDRFTDSSLVYQGGGRGLSTETVIRV 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ + + PD TI+LD+P+ G R N + D FE++ H+ RQ +L + Sbjct: 121 NDIATRGLKPDMTILLDIPISTGQHRKSN-------SVADRFEQEADEFHKSVRQSYLAL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A P+R +V+ S V + V L++ Sbjct: 174 AEADPERWKVVNGTLSRSEVTEAVWKHVKALLE 206 >gi|329894944|ref|ZP_08270743.1| Thymidylate kinase [gamma proteobacterium IMCC3088] gi|328922673|gb|EGG30008.1| Thymidylate kinase [gamma proteobacterium IMCC3088] Length = 212 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 6/217 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG GK+T ++L+K L+++ V VTREPGGT AE R VLLS + Sbjct: 1 MRKGYFITFEGGEGTGKSTQLALVKEALEQRGIKVCVTREPGGTELAEEIRRVLLSPRNE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ AAR H+ VI PA+ G+ +LCDRF D++YAYQ + L Sbjct: 61 TVDPTTELLLMFAARAQHLAQVILPAVDRGEWVLCDRFTDATYAYQQGGRGVDEDKIAIL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T++ D P++I L+R+++R LD FE++ + ++ R +L Sbjct: 121 ERLVQMGFNPDLTLLFDAPIEISLQRMRDR------GALDRFEQEGLEFMKRVRSTYLTR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 AR + +R ++D+ + V ++ + LV VS Sbjct: 175 ARVESERFRVIDATATVDDVRASVNLHLEPLVNAWVS 211 >gi|315605270|ref|ZP_07880316.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310] gi|315313087|gb|EFU61158.1| thymidylate kinase [Actinomyces sp. oral taxon 180 str. F0310] Length = 268 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 9/223 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +G+GK+T I ++ + + +V VTREPGGT R ++ + G ++ Sbjct: 6 RGVFITFEGGDGSGKSTQILAVRDWFASRGREVVVTREPGGTELGAEIRRLVQN-GPEDV 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA R HV V+ PAL G ++L DR++DSS AYQG S + SL Sbjct: 65 DARTEALLYAADRAYHVTTVVAPALERGAVVLGDRYIDSSLAYQGAARSLGVDEISSLSA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + P T +LDLP ++GL+R + D ER+ + HE+ R +L +A Sbjct: 125 WATRGLYPSLTFLLDLPPEVGLRR--------HTDAPDRMERESMDFHERVRHEYLRLAD 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 +PDR ++D+ + + V + I ++ E + V+ + D+ Sbjct: 177 AEPDRIVVIDAVGTVEEVFSEIRGVLVERFEGGVATIDEAADV 219 >gi|254428585|ref|ZP_05042292.1| thymidylate kinase [Alcanivorax sp. DG881] gi|196194754|gb|EDX89713.1| thymidylate kinase [Alcanivorax sp. DG881] Length = 208 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG EGAGK++++ L L+ V V+REPGGT AE+ R VLL+ G + Sbjct: 2 SGRFITLEGGEGAGKSSNLEWLADALRAAGKTVTVSREPGGTALAESIRGVLLAPGDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR H+E IRPAL G+ +LCDRF+D+++AYQG + L+ Sbjct: 62 ADDTELLLVFAARAQHLEQKIRPALARGEWVLCDRFVDATWAYQGAGRGLDSAAIADLES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +++ PD T++ D+PV++G+ R R A LD E++D E+ RQ +L A Sbjct: 122 LVIRDTRPDMTVLFDVPVEVGMARAGKR------AALDRIEQEDRAFFERIRQCYLARAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R VD+ SV + IV E++ Sbjct: 176 QEPSRFRTVDAGQPLGSVQQQLGAIVEEML 205 >gi|309390261|gb|ADO78141.1| thymidylate kinase [Halanaerobium praevalens DSM 2228] Length = 208 Score = 261 bits (669), Expect = 4e-68, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGIEG+GKTT I+ L +L++ +DV ++REPGGT + R +LL D Sbjct: 1 MAEGFFITFEGIEGSGKTTQINRLADYLRKNEHDVLISREPGGTELGQKIRKILLDPHFD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++AA R HV+ I+PAL GKI++ DRF+DS+ AYQ + + + Sbjct: 61 TMDYKTEILLYAADRAQHVKEKIKPALKAGKIVISDRFVDSNLAYQAAGRGLDYEQVYQI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T ILD+ + GL+R + L D ER+ H++ R+ +L++ Sbjct: 121 NNWVIGSTWPDLTFILDIDIKKGLERARK---LSFDQAGDRLEREVDDFHQRVREAYLEM 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +R ++++A S + +I NI+ + Sbjct: 178 AVA--ERFCLINAARSIVEIEKDIKNIIARRL 207 >gi|71735430|ref|YP_273889.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487544|ref|ZP_05641585.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289624541|ref|ZP_06457495.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649352|ref|ZP_06480695.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 2250] gi|123637325|sp|Q48L36|KTHY_PSE14 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71555983|gb|AAZ35194.1| thymidylate kinase [Pseudomonas syringae pv. phaseolicola 1448A] gi|320327699|gb|EFW83707.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4] gi|330869264|gb|EGH03973.1| thymidylate kinase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 210 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|194018013|ref|ZP_03056620.1| thymidylate kinase [Bacillus pumilus ATCC 7061] gi|194010350|gb|EDW19925.1| thymidylate kinase [Bacillus pumilus ATCC 7061] Length = 212 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+FEG EGAGKTT I + ++R+ Y V TREPGG AE R V+L+ + Sbjct: 2 SGMFITFEGPEGAGKTTVIRKVYEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR H+ + PAL G+ +LCDRF+DSS AYQG + S+ + Sbjct: 62 DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQGYARGLGIDQVRSIND 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ MP TI + + GLKR+ + + + + + H+ R+ + + Sbjct: 122 FAIDGTMPQMTIYFSITPEEGLKRIHANQGREK----NRLDMETLNFHQLVREGYELLIA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H+VD++ Q V +L ++ + ++K Sbjct: 178 QSPERFHVVDASQPMQDVYEEVLRVIQDTLKK 209 >gi|298486225|ref|ZP_07004288.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159232|gb|EFI00290.1| Thymidylate kinase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 210 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDALLPQLLELR 208 >gi|324991362|gb|EGC23295.1| thymidylate kinase [Streptococcus sanguinis SK353] Length = 212 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLTERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVEEGLARIAK----SESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|52078523|ref|YP_077314.1| thymidylate kinase [Bacillus licheniformis ATCC 14580] gi|52783885|ref|YP_089714.1| thymidylate kinase [Bacillus licheniformis ATCC 14580] gi|319648552|ref|ZP_08002766.1| thymidylate kinase [Bacillus sp. BT1B_CT2] gi|81667281|sp|Q65PJ3|KTHY_BACLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52001734|gb|AAU21676.1| thymidylate kinase [Bacillus licheniformis ATCC 14580] gi|52346387|gb|AAU39021.1| Tmk [Bacillus licheniformis ATCC 14580] gi|317389319|gb|EFV70132.1| thymidylate kinase [Bacillus sp. BT1B_CT2] Length = 212 Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 122/214 (57%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLFI+FEG EGAGKTT + L + + V TREPGG +E R V+L+ Sbjct: 1 MN-GLFITFEGPEGAGKTTILQAAADQLTKNGHSVLATREPGGIEISERIREVILNPSHT 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA+++AAAR H+ ++PAL EGKI+LCDRF+DSS AYQG + S+ Sbjct: 60 AMDPKTEALLYAAARRQHLVEKVKPALEEGKIVLCDRFIDSSLAYQGYARGLGIDEVFSV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ +MP+ TI D+ + G+KR+ L ++ + + + + H+ ++ + ++ Sbjct: 120 NQFAIGSLMPNVTIYFDIDPEEGIKRI----DLNDAREKNRLDLEKLHFHQLVQKGYEEV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R IVD++ S + V + NI+ E +++ Sbjct: 176 MNRFPGRFRIVDASQSVELVLKRVNNIIEEALKE 209 >gi|312142724|ref|YP_003994170.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus'] gi|311903375|gb|ADQ13816.1| thymidylate kinase [Halanaerobium sp. 'sapolanicus'] Length = 208 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGIEG+GK+T I LL +L+++ +V +TREPGGT + R +LL + Sbjct: 1 MGEGFFITFEGIEGSGKSTQIKLLGDYLKKEGKEVVITREPGGTELGKKIRQLLLDPAHE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++ A R H ++VI+PAL GK+++ DRF DS+ AYQ + + + Sbjct: 61 DMDYRTEILLYTADRAQHFKDVIKPALKAGKVVISDRFADSNLAYQAAGRGLDYELVYKI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T +LD+ + GLKR + D ER+ H++ R+ +L++ Sbjct: 121 NDWVIDSRWPDLTFVLDVAIAEGLKRARASSFDLNG---DRLEREADSFHQRVRKAYLEM 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + DR +VD + + V + NI+ + Sbjct: 178 VKR--DRFALVDGNLAEEEVHQEVKNIITRRL 207 >gi|213691095|ref|YP_002321681.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254808279|sp|B7GT80|KTHY_BIFLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|213522556|gb|ACJ51303.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457150|dbj|BAJ67771.1| thymidylate kinase [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 233 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 11/218 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL G Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTVLGKAIRQLLLHGVDGGA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ + S Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++PD T +LD+ + R+++ D E + RQ FLD Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHNRLEH--------AEDRMESAGSDFQSRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A +P+R H++D++ S + V + I + L++ V+ Sbjct: 174 LAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211 >gi|239825610|ref|YP_002948234.1| thymidylate kinase [Geobacillus sp. WCH70] gi|259494272|sp|C5D352|KTHY_GEOSW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|239805903|gb|ACS22968.1| thymidylate kinase [Geobacillus sp. WCH70] Length = 210 Score = 261 bits (668), Expect = 6e-68, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 116/213 (54%), Gaps = 4/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F SFEG +GAGKTT I+ L+ FL+ K +DV +TREPGG AE R ++L+ E Sbjct: 2 KGRFFSFEGPDGAGKTTMITKLESFLREKGFDVLLTREPGGVRIAEEIRSIILNPKHTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PA+ GKI+LCDRF+DSS AYQG + + + Sbjct: 62 DGRTEALLYAAARRQHLLEKIIPAIKAGKIVLCDRFVDSSLAYQGFARGLGIDEILQINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ P TI D+ IGL+R+Q + ++ + + + H K R+ +L IA Sbjct: 122 FAIDGFFPSLTIYFDIDPKIGLERIQKN----KQREINRLDMESLSFHYKVREGYLKIAE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 DR ++D++ V + V + ++ R Sbjct: 178 RFSDRIIVIDASKPVDEVFAMTIAAVMDQIEGR 210 >gi|307942275|ref|ZP_07657626.1| thymidylate kinase [Roseibium sp. TrichSKD4] gi|307774561|gb|EFO33771.1| thymidylate kinase [Roseibium sp. TrichSKD4] Length = 229 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 97/214 (45%), Positives = 131/214 (61%), Gaps = 1/214 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG EGAGKTT I+ LK+ L+ + +TREPGG+P AE R +LLS + Sbjct: 2 TGQFITFEGGEGAGKTTQIARLKQRLEELGKTICLTREPGGSPGAEKIREMLLSGAARKL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ VI PAL+ G ++CDRF DS+ YQGE + LD L+ Sbjct: 62 GPRGEAMLFAAARADHVDGVIAPALVRGDWVICDRFADSTRVYQGEA-GVDNETLDLLET 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+V PD TI++D+P DIGL RV +R +S D FE + HE+RR +FLD+A+ Sbjct: 121 IAVAGTRPDLTILIDIPADIGLSRVSSRSKTDDSGGPDRFEADTIATHERRRSLFLDLAK 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 QP+R +VD H VA I V + + Sbjct: 181 QQPERFVVVDGRHDPDHVAGEIWWAVHRHFKDLL 214 >gi|323697768|ref|ZP_08109680.1| thymidylate kinase [Desulfovibrio sp. ND132] gi|323457700|gb|EGB13565.1| thymidylate kinase [Desulfovibrio desulfuricans ND132] Length = 213 Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 1/206 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T I ++ + + + +V +T EPGG+ R +LL E Sbjct: 1 MFITFEGIEGTGKSTQIGRVRDYFEARGREVLLTLEPGGSRIGVELRKMLLHVDNREITP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A R HV VIRPAL GK++LCDRF DS+ YQG L L E++ Sbjct: 61 ITELFLYLADRAQHVGQVIRPALAAGKVVLCDRFADSTIVYQGYGRGLDTSMLRELNEVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V + PD TI+LD+ +IGLKR R A + FE + + H++ R+ +L A Sbjct: 121 VNGLWPDLTIVLDIDPEIGLKRATLRNIEDGKAKEEGRFEAEHLSFHKRIREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 R +VD+A + V I ++ Sbjct: 181 NHRRMSVVDAAGTPDQVFDQIRAVIE 206 >gi|307826061|ref|ZP_07656274.1| thymidylate kinase [Methylobacter tundripaludum SV96] gi|307732900|gb|EFO03764.1| thymidylate kinase [Methylobacter tundripaludum SV96] Length = 223 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GKTT+++ +K +L++ N V VTREPGGT AE R +LL + Sbjct: 1 MIRGKFITLEGCEGVGKTTNMAFIKDYLEQHNISVVVTREPGGTKLAEKIRQLLLDNKSE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +AE ++ AAR H+++VI PAL +GK +LCDRF D++YAYQG + + + L Sbjct: 61 TISEQAELLMMFAARAQHIKHVIEPALAQGKWVLCDRFTDATYAYQGGGRNMKISTIKWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T++LD P++IG+ RV+ R LD FE + + E R+ +L Sbjct: 121 ENLVQGTLRPDLTLLLDAPIEIGIARVRER------GALDRFELEKISFFENVRRAYLLQ 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P+R ++ + V I +++ L+ Sbjct: 175 AELYPERIKLIKANQPLIDVQRAITDVIRTLL 206 >gi|226356637|ref|YP_002786377.1| dTMP kinase (thymidylate kinase) [Deinococcus deserti VCD115] gi|226318627|gb|ACO46623.1| putative dTMP kinase (thymidylate kinase) [Deinococcus deserti VCD115] Length = 218 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 113/207 (54%), Gaps = 7/207 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEG EGAGK+T I+ L L+ ++ VTREPGGTP R VLL + Sbjct: 12 FISFEGPEGAGKSTQIARLVARLEERSVPHTVTREPGGTPLGTRVREVLLDPDLS-IDPL 70 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++++A+R V +VIRPAL +G ++CDR+ DSS AYQG L L + Sbjct: 71 PEFLLYSASRAQLVTHVIRPALTQGHTVICDRYFDSSLAYQGAGRGLPVRLLRDLTREAT 130 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LDL +GL+RV +R D ER D+ H++ RQ FLD+A +P Sbjct: 131 GGLTPDLTVLLDLDPALGLQRVASR------GQADRLERADLGFHQRVRQGFLDLAAAEP 184 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212 R ++D+ S +A I V + Sbjct: 185 GRFLVLDATRSVDELAREIWTAVERWL 211 >gi|329889614|ref|ZP_08267957.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568] gi|328844915|gb|EGF94479.1| thymidylate kinase [Brevundimonas diminuta ATCC 11568] Length = 208 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGKTT LL L+ + DV TREPGG+P AE R++ +S D Sbjct: 1 MQRGRFITFEGGEGAGKTTQARLLVERLRARGLDVLQTREPGGSPGAEEIRNIAVSGEAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A E ++ AAR DH+E I PAL G+ ++CDRF DSS YQG + +++L Sbjct: 61 RWSARTETLLMYAARSDHLERTILPALEAGRWVVCDRFADSSRVYQGAGGGTPESLIEAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD T++ DLPV++GL R R FE K + H+K R FL + Sbjct: 121 DDAVVNGDQPDLTLVFDLPVEVGLDRAFGRGLFET-----RFESKGLAFHQKLRDGFLKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P+RC ++D+ V+ + +V E + Sbjct: 176 AERHPERCVVLDATGEVDEVSARLWAVVEERL 207 >gi|78485063|ref|YP_390988.1| thymidylate kinase [Thiomicrospira crunogena XCL-2] gi|78363349|gb|ABB41314.1| thymidylate kinase [Thiomicrospira crunogena XCL-2] Length = 219 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 1/210 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG F++ EG EG GK+T++ ++++L N DV VTREPGGT +EA R +LL E Sbjct: 11 SGKFLTLEGTEGGGKSTNLVFIQQWLADHNIDVVVTREPGGTAVSEAVREILLDKQYSEM 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR H++ I PAL GK ++ DRF D+SYAYQG + + ++ Sbjct: 71 TPETELLLMFAARNQHLQEKILPALAAGKWVVSDRFTDASYAYQGGARGIAYDRIAEIEN 130 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 Q PD T + DLP++ G+KRV R L +D FE++ + EK R +L A Sbjct: 131 WVQQGCYPDMTFVFDLPIEEGMKRVAARSKL-SGQAIDRFEQEKMEFFEKVRAAYLYRAE 189 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++++A V + + + L+ Sbjct: 190 QAPQRYCVLNAARPLNEVQEKLASQLESLL 219 >gi|293194284|ref|ZP_06609970.1| dTMP kinase [Actinomyces odontolyticus F0309] gi|292819731|gb|EFF78745.1| dTMP kinase [Actinomyces odontolyticus F0309] Length = 271 Score = 261 bits (667), Expect = 7e-68, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +G+GK+T I ++ + + + +V VTREPGGT R ++ + G ++ Sbjct: 4 RGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRRLVQN-GPEDV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA R HV VI PAL G ++L DR++DSS AYQG S + SL Sbjct: 63 DARTEALLYAADRAYHVATVIAPALERGAVVLGDRYIDSSLAYQGAARSLGVDEIASLSA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + P T +LDLP ++GL R + D ER+ + HE+ R +L +A Sbjct: 123 WATRGLYPSLTFLLDLPPEVGLHR--------HTDAPDRMERESMDFHERVRHEYLRLAD 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +PDR ++D+ + V + I ++ E + Sbjct: 175 AEPDRIVVIDAVGTVDEVFSEIRGVLVERFE 205 >gi|121534353|ref|ZP_01666177.1| dTMP kinase [Thermosinus carboxydivorans Nor1] gi|121307123|gb|EAX48041.1| dTMP kinase [Thermosinus carboxydivorans Nor1] Length = 210 Score = 261 bits (667), Expect = 8e-68, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 7/214 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG +GAGKTT ++LL +L+ + + V TREPGGTP +A R +LL Sbjct: 3 GLFITFEGADGAGKTTQLALLADYLRAQGWPVRCTREPGGTPLGDAIRALLLDPANARMA 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++ AAR HV VI PAL G+I+L DR+ DS+ YQG L ++ Sbjct: 63 PRTEALLYMAARAQHVAEVIAPALARGEIVLSDRYADSTIVYQGVARQLPEHELAAINAF 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI+LD ++ R+ R D ER+ HE+ RQ FL +A Sbjct: 123 ATGGLEPDLTILLDCRQEVLSGRMAGR------GAKDRIEREAARFHEQVRQGFLRLAAA 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 DR ++++ S Q+V ++ V + + +R S Sbjct: 177 -SDRFCVIEADGSVQAVHARVIAAVQQFLDRRGS 209 >gi|302038227|ref|YP_003798549.1| thymidylate kinase [Candidatus Nitrospira defluvii] gi|300606291|emb|CBK42624.1| Thymidylate kinase [Candidatus Nitrospira defluvii] Length = 241 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+ EG EG GK+T LL L+ + YD TREPGGTP AE R VLL + Sbjct: 10 RGLFITLEGTEGCGKSTQAKLLGEHLRNQGYDTVETREPGGTPLAEKIRSVLLDRADEPV 69 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E EA + AAR HV VI PAL G I+LCDRF+DS+ AYQG L+ L Sbjct: 70 APETEAFLVLAARRQHVAQVIEPALARGSIVLCDRFIDSTLAYQGYARGLDIATLERLNR 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +MPD T++ DLPV GL R R +A L+ +R+ + H + R FLD+A+ Sbjct: 130 LATHTLMPDLTLVFDLPVSTGLAR------RRSAAELNRLDRESLRFHRRVRAGFLDLAK 183 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R IV + S ++VA + IV L+ + Sbjct: 184 RHPRRIQIVSARASRETVARAVARIVTPLLDR 215 >gi|66044897|ref|YP_234738.1| thymidylate kinase [Pseudomonas syringae pv. syringae B728a] gi|75502746|sp|Q4ZVX2|KTHY_PSEU2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|63255604|gb|AAY36700.1| Thymidylate kinase [Pseudomonas syringae pv. syringae B728a] Length = 210 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERVRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ AR Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V + ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206 >gi|308176312|ref|YP_003915718.1| dTMP kinase [Arthrobacter arilaitensis Re117] gi|307743775|emb|CBT74747.1| dTMP kinase [Arthrobacter arilaitensis Re117] Length = 217 Score = 260 bits (666), Expect = 8e-68, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 119/211 (56%), Gaps = 2/211 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI FEG +GAGKTT +++ +++L+ + V TREPGGT +E R ++L G E Sbjct: 9 TRGLFIVFEGGDGAGKTTQVAMAQQWLESRGATVRTTREPGGTQISEELRSLVLEHGHGE 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++++AAR HV+ VIRP+L G ++CDRF+DSS AYQG + S+ Sbjct: 69 IDARTEALIYSAARAAHVQQVIRPSLEAGTHIICDRFVDSSLAYQGMGRELGFAAVASIN 128 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TIILD+ + G R E + D E + HE+ R FL++A Sbjct: 129 DFATGGLKPDVTIILDISAEHGRARRIAASGGVEDS--DRLEAEPDDFHERIRNAFLELA 186 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D+ S + + +I+ + L+ Sbjct: 187 AQDPQRYLVLDATASVEQLHQSIVEHLAGLL 217 >gi|90424201|ref|YP_532571.1| thymidylate kinase [Rhodopseudomonas palustris BisB18] gi|122476154|sp|Q214D4|KTHY_RHOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|90106215|gb|ABD88252.1| thymidylate kinase [Rhodopseudomonas palustris BisB18] Length = 230 Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG EGAGK+T I LL L +TREPGG+P AE RH++LS Sbjct: 11 TRGRFITFEGGEGAGKSTQIKLLAERLNAGRIRCVLTREPGGSPGAEIIRHMILSGIGSL 70 Query: 62 FG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EAE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG+ + L+++ Sbjct: 71 IGGTEAETLLFAAARDDHVHTVIEPALAQGSWVLCDRFTDSTRAYQGQMGAVAPALLNAM 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q +++ ++ PD TIILD+PV+IG+KR + R R +A D FE + + H K R+ + I Sbjct: 131 QRVTIGDLKPDLTIILDVPVEIGVKRARLR---RGAAEPDRFEAESLEFHRKLREAYRQI 187 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A ++P RC ++D+ + VA + V + + Sbjct: 188 AADEPQRCVLIDANAKVKPVAAKVWAAVQKRL 219 >gi|330973853|gb|EGH73919.1| thymidylate kinase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 210 Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELMLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSHQRIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ AR Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAR 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+A + V + ++ +L++ Sbjct: 176 AEPARYRLVDAAQTLADVQACLDTLLPQLLE 206 >gi|90021281|ref|YP_527108.1| thymidylate kinase [Saccharophagus degradans 2-40] gi|89950881|gb|ABD80896.1| thymidylate kinase [Saccharophagus degradans 2-40] Length = 208 Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +++G FI+ EG EG GK+T+I L+K LQ+ ++ VTREPGGTP AE R+VLL+ + Sbjct: 2 ISTGKFITVEGTEGVGKSTNIELIKTLLQQAGIELVVTREPGGTPLAEELRNVLLANRDE 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AE +V AAR H+ VI+PAL GK +L DRF D+++AYQG+ + L Sbjct: 62 NFDPLAELLVVFAARAQHINQVIKPALAAGKWVLSDRFTDATFAYQGKGRGLPIQAILQL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ Q + PD T +LD+ V +GL+R + R LD FE + + EK R + + Sbjct: 122 EQMVQQGLQPDATFLLDIDVQVGLERARER------GELDRFENEHITFFEKVRAGYHER 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R ++++ S ++V ++ V +L+ Sbjct: 176 VAATPERFMVINAGQSLEAVQQDVTLAVEKLL 207 >gi|330985597|gb|EGH83700.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 210 Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFADATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|154508479|ref|ZP_02044121.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC 17982] gi|153798113|gb|EDN80533.1| hypothetical protein ACTODO_00979 [Actinomyces odontolyticus ATCC 17982] Length = 270 Score = 260 bits (666), Expect = 9e-68, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG +G+GK+T I ++ + + + +V VTREPGGT R ++ + G ++ Sbjct: 4 RGVFITFEGGDGSGKSTQIQSVRDWFESRGREVIVTREPGGTELGTEIRRLVQN-GPEDV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA R HV VI PAL G ++L DR++DSS AYQG S + SL Sbjct: 63 DARTEALLYAADRAYHVATVIAPALERGAVVLADRYIDSSLAYQGAARSLGVDEIGSLSA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + P T +LDLP ++G +R + D ER+ + HE+ R +L +A Sbjct: 123 WATRGLYPSLTFLLDLPPEVGARR--------RTDAPDRMERESMDFHERVRHEYLRLAD 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +PDR ++D+ + V + I ++ E + Sbjct: 175 AEPDRIVVIDAVGTVDEVFSEIRGVLVERFE 205 >gi|320451196|ref|YP_004203292.1| thymidylate kinase [Thermus scotoductus SA-01] gi|320151365|gb|ADW22743.1| thymidylate kinase [Thermus scotoductus SA-01] Length = 199 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 13/210 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++ EG++G+GKTT LL +FL+ K V +TREPGG R +LL + Sbjct: 2 KGFFLTLEGLDGSGKTTQARLLAQFLEEKGIKVRLTREPGGGLPG--VRDLLLKG--EAL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++F+A R +HV VI PAL EG ++ DR+LDSS AYQG +L + + Sbjct: 58 SPEAEYLLFSADRAEHVRKVILPALEEGFWVISDRYLDSSLAYQGYGQGLPLPWLKEVAK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T +LDLP + LKRV D ER + ++ RQ +L +A Sbjct: 118 EATLGLKPDLTFLLDLPPEEALKRVSA---------PDRLERMGLPFFQRVRQGYLKLAA 168 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R ++D+ + V I + L+ Sbjct: 169 AEPERFRVLDATRPVEEVQAAIRFGILPLL 198 >gi|322386922|ref|ZP_08060546.1| thymidylate kinase [Streptococcus cristatus ATCC 51100] gi|321269204|gb|EFX52140.1| thymidylate kinase [Streptococcus cristatus ATCC 51100] Length = 212 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 5/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FIS EG EGAGKT+ + L L+ Y++ TREPGG +E R V+L G Sbjct: 1 MKKGVFISLEGPEGAGKTSVLEALLPQLKEMGYELLTTREPGGVAISEKIREVILDKGHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+AE +++ A+R H+ + PAL +G +L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKAELLLYIASRRQHLAEKVLPALEQGTWVLQDRFIDSSVAYQGYGRGLAVDDVEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V GL R+ R RE ++ + + + +HE+ RQ +L I Sbjct: 121 NQFATDGLKPDLTLYFDIDVKEGLARI-ARNKERE---VNRLDLEGLDLHERVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE-LVQKR 215 +P R +D++ + V + L ++ E ++++ Sbjct: 177 LEKEPGRVVKIDASQPLEQVVADSLAVIKERFIKEK 212 >gi|320325316|gb|EFW81383.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. B076] Length = 210 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAVAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|169825658|ref|YP_001695816.1| thymidylate kinase [Lysinibacillus sphaericus C3-41] gi|168990146|gb|ACA37686.1| Thymidylate kinase [Lysinibacillus sphaericus C3-41] Length = 215 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MNS LFI+FEG EGAGKTT I + L KN DV TREPGG AE R ++L+ Sbjct: 7 MNSNLFITFEGPEGAGKTTVIQKIAERLAEKNIDVLATREPGGIEIAEKIRTIILNPAHT 66 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H +RPAL GK+++CDRF+DSS AYQG + S+ Sbjct: 67 AMDERTEALLYAAARSQHYFEKVRPALDAGKLVICDRFIDSSLAYQGYARGIGIDEVLSI 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + +PD TI+ D+ ++GL R+ + ++ + + + H+K + +L + Sbjct: 127 NEFAIGKKLPDMTILFDIAPEVGLARI----YATGNREVNRLDVESLPFHQKVHEGYLLL 182 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +V++ SV + +++ + +Q Sbjct: 183 VERYPERIRMVNADQDIDSVVEEVWSLLLKAIQ 215 >gi|295692244|ref|YP_003600854.1| thymidylate kinase [Lactobacillus crispatus ST1] gi|295030350|emb|CBL49829.1| Thymidylate kinase [Lactobacillus crispatus ST1] Length = 212 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 11/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58 G F+SFEG +GAGK+T LK L + + VTREPGG+ AE R ++L Sbjct: 2 RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELKTQYLVTREPGGSKIAEKIRDIILDPA 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + Sbjct: 59 NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + ++ PD T LDL ++GLKR++ +E D E++++ H+K FL Sbjct: 119 QINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P+R VD+ V ++ + + + + Sbjct: 175 KVKETYPERFVTVDATQPIDQVVAQVIATLKQRMPE 210 >gi|317153459|ref|YP_004121507.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2] gi|316943710|gb|ADU62761.1| thymidylate kinase [Desulfovibrio aespoeensis Aspo-2] Length = 213 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 110/209 (52%), Gaps = 1/209 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GKTT I+ LK + + + VH+TREPGG+ R +LL + Sbjct: 1 MFITFEGIEGTGKTTQIARLKEYFESRGRAVHLTREPGGSRVGRELRQMLLHVDNADLTP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A R HV VIRP L G+++LCDRF DS+ YQG L L E++ Sbjct: 61 ITELFLYLADRAQHVAQVIRPQLEAGRVVLCDRFADSTIVYQGFGRGLDTAILKQLNEVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V V PD TI+LD+ ++GLKR R A + FE + + H + R+ +L A Sbjct: 121 VDGVWPDLTIVLDIDPEVGLKRATLRNLDDGKAKEEGRFEAEHISFHRRIREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR + D++ + V + ++ + Sbjct: 181 NRDRIRVADASATPDEVFARVKALIETHL 209 >gi|238853621|ref|ZP_04643990.1| dTMP kinase [Lactobacillus gasseri 202-4] gi|238833765|gb|EEQ26033.1| dTMP kinase [Lactobacillus gasseri 202-4] Length = 213 Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ L + L ++ +TREPGG+ +E R ++L E Sbjct: 2 KGYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG + + Sbjct: 62 MDDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQGVGRDLGVEEVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL GL R++ + D E++ + H+K ++D+ Sbjct: 122 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHKKVYAGYIDLL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + PDR VD+ + VA N + I+ + + Sbjct: 178 KRYPDRIKKVDANLPIEEVAANSVKIIRKQL 208 >gi|325694989|gb|EGD36893.1| thymidylate kinase [Streptococcus sanguinis SK150] Length = 212 Score = 259 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ IS EG EGAGK++ + L FLQ + TREPGG AEA R V+L Sbjct: 1 MKNGILISLEGPEGAGKSSVLEALLPFLQSYGTGLITTREPGGVQIAEAIREVILEPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E +++ A+R H+ + PAL +GK++L DRF+DSS AYQG ++ L Sbjct: 61 AMDAKTELLLYIASRRQHLAERVLPALTQGKLVLMDRFIDSSVAYQGYGRGLDVADIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ES ++ + + + +H++ RQ +L I Sbjct: 121 NRFATDGLKPDLTLYFDIDVEEGLARIA----RSESREVNRLDLEGLDLHQRVRQGYLAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R VD++ V + L I+ E Sbjct: 177 LDKEPERFVKVDASQPLDKVVADSLAIIQE 206 >gi|326693439|ref|ZP_08230444.1| thymidylate kinase [Leuconostoc argentinum KCTC 3773] Length = 217 Score = 259 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 5/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ + L LQ + + TREPGG P +EA R +L Sbjct: 1 MTKPLFITFEGPEGAGKTSVLQALVAELQPQLGEALVTTREPGGNPISEAIRAILQPAED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ +V+ PAL GK+++ DR++DSS AYQG + Sbjct: 61 NGMDDRTEALLYTAARRQHLVSVVLPALEAGKVVISDRYVDSSLAYQGGGRGLGIEQIWQ 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ +MPD TI D+P ++GL RV + +D +++ + H+ R+ +L Sbjct: 121 INQFAIDGLMPDLTIYFDVPAEVGLARVMANRQDK----IDRLDKESLAFHQAVRETYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R+ DR ++D+ + V ++++++ R Sbjct: 177 LQRDFSDRIKLIDATQPLEQVIAETRTLLFDIIASR 212 >gi|256844526|ref|ZP_05550012.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN] gi|256613604|gb|EEU18807.1| thymidylate kinase [Lactobacillus crispatus 125-2-CHN] Length = 212 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 11/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58 G F+SFEG +GAGK+T LK L + + VTREPGG+ AE R ++L Sbjct: 2 RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPA 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + Sbjct: 59 NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + ++ PD T LDL ++GLKR++ +E D E++++ H+K FL Sbjct: 119 QINDFATDKLDPDLTFFLDLDPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P+R VD+ V ++ + + + + Sbjct: 175 KVKETYPERFVTVDATQPIDQVVAQVIATLKQRMPE 210 >gi|300362307|ref|ZP_07058483.1| thymidylate kinase [Lactobacillus gasseri JV-V03] gi|300353298|gb|EFJ69170.1| thymidylate kinase [Lactobacillus gasseri JV-V03] Length = 213 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ L + L ++ +TREPGG+ +E R ++L E Sbjct: 2 KGYLITFEGPDGAGKTTVINELIKQLPKEIQKKTIITREPGGSKISENIRTIILDPANKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG + + Sbjct: 62 MDDRTEALLYAAQRSQHVSEVIRPALAAGKIVLSDRFIDSSLAYQGVGRDLGVEAVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL GL R++ + D E++ + H+K ++D+ Sbjct: 122 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHKKVYAGYIDLL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + PDR VD+ + VA N + I+ + + Sbjct: 178 KRYPDRIKKVDANLPIEEVAANSVKIIRKQL 208 >gi|86607432|ref|YP_476195.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab] gi|123504727|sp|Q2JR37|KTHY_SYNJA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|86555974|gb|ABD00932.1| thymidylate kinase [Synechococcus sp. JA-3-3Ab] Length = 204 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 108/208 (51%), Gaps = 11/208 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EG GKTT +LL LQR+ Y TREPGGT EA R +LL D Sbjct: 1 MFITLEGGEGVGKTTQQALLAERLQREGYACVSTREPGGTALGEALRELLLHG--DPLTP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++AA R +HV VI PAL G++++CDRF DS+ AYQG + L ++ Sbjct: 59 LAELLLYAADRAEHVNKVIAPALAVGQVVICDRFTDSTLAYQGYGRGLNLEQIRQLNHLA 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P T+ LDL ++GL R S D E++ + H + + F +A + Sbjct: 119 TGGLQPQLTLWLDLAPEVGLAR---------SRLGDKLEQEHLEFHRRVYRGFQALAAAE 169 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +D+ S VA I ++V + Sbjct: 170 PQRIVRIDAGGSPLEVAARIWSVVKPRL 197 >gi|330975208|gb|EGH75274.1| thymidylate kinase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 210 Score = 259 bits (664), Expect = 2e-67, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 123/211 (58%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+ +LCDRF D++YAYQG H + +L++ Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEGVLCDRFTDATYAYQGGGRGLSHERIAALEQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L+ A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLERAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +VD+ + V ++ ++ +L++ Sbjct: 176 AEPTRYRLVDAGQTLADVQASLDTLLPQLLE 206 >gi|118444724|ref|YP_879227.1| thymidylate kinase [Clostridium novyi NT] gi|171472994|sp|A0Q3M5|KTHY_CLONN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118135180|gb|ABK62224.1| thymidylate kinase [Clostridium novyi NT] Length = 205 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 4/209 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G FI+ EG EG+GKTT + +++++L N + TREPGG +E R V+L+ Sbjct: 1 MNKGAFITLEGPEGSGKTTIVKMIEKYLSENNIEYISTREPGGINISEQIRDVILNKDNV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA+++ A+R H+ + PA+ EGK+++CDRF+DSS AYQG + ++ Sbjct: 61 AMDARTEALLYVASRRQHLAERVIPAIKEGKVVICDRFIDSSLAYQGYARGIGIDEVMAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ MPD T+ LD+ ++GLKR+ ++ + + + H+K R+ + + Sbjct: 121 NEFAIDGYMPDLTLYLDIEPEVGLKRISKNNE----REVNRLDLEALDFHKKVREGYFKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 P+R +++ V + + Sbjct: 177 LEKYPNRIKKINANQPVDKVFEEVKGFLK 205 >gi|154253550|ref|YP_001414374.1| dTMP kinase [Parvibaculum lavamentivorans DS-1] gi|154157500|gb|ABS64717.1| dTMP kinase [Parvibaculum lavamentivorans DS-1] Length = 209 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EG EGAGK+T + L L+ V +TREPGG P AEA RH+L++ V Sbjct: 1 MPRARFITLEGGEGAGKSTQVRRLAARLEAAGQRVTITREPGGAPGAEAIRHLLVTGDVA 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +AE ++ AAR DH+ IRPAL G ++CDRF+DS+ AYQG ++ L Sbjct: 61 RWTPKAEMLLHFAAREDHLSRTIRPALERGDWVICDRFVDSTMAYQGFAQGLGPELVNEL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +EI + + MP T+ILDLPV+ GL R +R E D +ER D+ HE RQ F I Sbjct: 121 KEIVIGDDMPGLTLILDLPVETGLARAGSRGQGAE----DRYERMDLRFHETLRQAFETI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A+N+P+RC +VD++ + VA I V + Sbjct: 177 AKNEPERCVMVDASQTEDEVAEAIWAEVKPRL 208 >gi|30250115|ref|NP_842185.1| thymidylate kinase [Nitrosomonas europaea ATCC 19718] gi|46576512|sp|Q82SW5|KTHY_NITEU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|30139222|emb|CAD86092.1| Thymidylate kinase [Nitrosomonas europaea ATCC 19718] Length = 215 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 7/211 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EGI+GAGK+TH++ L+RFLQ K +V VTREPGGT EA R +LL Sbjct: 1 MQRGKFITVEGIDGAGKSTHLAWLERFLQDKGLEVVVTREPGGTALGEALRQLLLDHR-Q 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA++ AAR +H++ VI PAL G ++ DRF D+S+AYQG LD+L Sbjct: 60 AMHPETEALLMFAARREHLDKVILPALDRGAWVVSDRFTDASFAYQGGGRGVAQSKLDNL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ E+ PD T+ D+PV +G +R+Q+ + D FE + + E+ RQ +L Sbjct: 120 EQWVQAELSPDLTVYFDVPVIVGRERLQS------TRVADRFEMESNLFFERVRQAYLQR 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R +VD + V T + IV + Sbjct: 174 AEQFPQRIRVVDGSRLLAEVKTAVAEIVEDF 204 >gi|237748461|ref|ZP_04578941.1| thymidylate kinase [Oxalobacter formigenes OXCC13] gi|229379823|gb|EEO29914.1| thymidylate kinase [Oxalobacter formigenes OXCC13] Length = 207 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 9/210 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG FI+FEGI+GAGK+THI + L+ N V VTREPGGT E R +LL D+ Sbjct: 6 HSGRFITFEGIDGAGKSTHIQFVTDLLRADNRQVVVTREPGGTVLGEKLREMLLH---DK 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ AAR +H+ VI PAL G ++ DRF D+S+AYQG + L+ Sbjct: 63 MNLETEALLMFAARREHIAEVIEPALQRGDWVISDRFTDASFAYQGGGRGLDLHKMRQLE 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD T++ D+ ++ R++ + D FER+ + R +L A Sbjct: 123 EWVHPHLQPDLTLLFDVSPEVAQARLEA------ARSPDKFEREKSGFFNRVRDEYLRRA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + PDR ++DS+ S +++ I ++ EL Sbjct: 177 KEFPDRFRVIDSSRSIEAIRETIKGLIGEL 206 >gi|291614001|ref|YP_003524158.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1] gi|291584113|gb|ADE11771.1| thymidylate kinase [Sideroxydans lithotrophicus ES-1] Length = 202 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 121/211 (57%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ FI+FEG++GAGK+TH+ L+++ D+ VTREPGGT E R +LL+ Sbjct: 1 MSTAKFITFEGVDGAGKSTHLDWFANVLRQRGIDLLVTREPGGTQLGERLREILLNQ--- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE EA++ AAR +HVE VIRPAL G ++ DRF D+S+AYQG L+ L Sbjct: 58 PMHAETEALLMFAARREHVEQVIRPALQRGTWVISDRFSDASFAYQGGGRGVPVAKLEQL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ ++ PD T++ D+P++I +R+ N +A LD FE++ E+ RQ +L Sbjct: 118 EQWVHGDIQPDLTLLFDIPIEIARQRLSN------NASLDRFEQEQGEFFERVRQAYLSR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R ++ + S V ++ IV L Sbjct: 172 AAKTPHRFAVIHAEKSMDEVKQDLAKIVASL 202 >gi|331000633|ref|ZP_08324288.1| dTMP kinase [Parasutterella excrementihominis YIT 11859] gi|329570905|gb|EGG52613.1| dTMP kinase [Parasutterella excrementihominis YIT 11859] Length = 202 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 11/211 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG++GAGK+T ++ L+ + D +TREPGG +AE R +LL+ + Sbjct: 3 KRGKFITVEGVDGAGKSTQFEVIANALKERGIDFVMTREPGGPQSAEKIRELLLN---EP 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ E +V AAR +++ +IRPAL GK +LCDRF D+S AYQG ++ L Sbjct: 60 MTAKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLA 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+I DLP ++ R+ S LD FE++D H + RQ +L+IA Sbjct: 120 NFVHPDIKPDKTVIFDLPTEVAAARL--------SRKLDRFEQEDADFHRRVRQGYLEIA 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +P+RC ++D+ + + V+ +L V V Sbjct: 172 KREPERCVVIDAQGTPEEVSARVLKEVETWV 202 >gi|160893397|ref|ZP_02074183.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50] gi|156864972|gb|EDO58403.1| hypothetical protein CLOL250_00947 [Clostridium sp. L2-50] Length = 211 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+ EG +GAGKTT I LLK +L +K YDV +TR+PGG +EA R V+L+ E Sbjct: 5 QGIFITMEGPDGAGKTTQIELLKDYLNKKGYDVLITRDPGGNAVSEAIREVILNKDFTEM 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E +++AAAR V+ I+PAL GK ++ DRF+DSS YQG + + E Sbjct: 65 GYMTELLLYAAARAQLVKENIKPALSAGKAVIADRFVDSSAVYQGIGRGLGIDTVYKVNE 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++Q ++PD T ++DL + G+ R +N A LD E++ + H+K + + +A Sbjct: 125 FALQGILPDMTFLMDLDAEAGIARKKN------QAELDRMEQESLEFHKKVVEGYRCLAE 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PDR VD+A +++ I++ V + + + Sbjct: 179 MNPDRIVKVDAALPKEAIHDIIISYVEKWLAR 210 >gi|319405648|emb|CBI79271.1| Thymidylate kinase [Bartonella sp. AR 15-3] Length = 210 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 135/210 (64%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT ISLL + L RK YDV +TREPGGT AEA R++LLS V E+ Sbjct: 2 SGYFITFEGGEGAGKTTQISLLAQHLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAEY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E +F AAR DHV +I+P+L GKI+LCDRF+DS+ YQG + L+ Sbjct: 62 GPFIETFLFTAARADHVSEIIKPSLQAGKIVLCDRFIDSTRVYQGLDNKVDAHIFSILEH 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ + PD T +LD+P +G++RV R +DYFE+ + + E+RRQ FL++A+ Sbjct: 122 IGMKGIKPDLTFLLDIPAKLGMERVNLRRK-----KIDYFEKASLALQEQRRQAFLELAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++P R ++D S + +A I +I + + Sbjct: 177 HEPHRFQVIDGTCSVEVIADQIKDICHQAL 206 >gi|157690810|ref|YP_001485272.1| thymidylate kinase [Bacillus pumilus SAFR-032] gi|166987700|sp|A8F8Z5|KTHY_BACP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157679568|gb|ABV60712.1| dTMP kinase [Bacillus pumilus SAFR-032] Length = 212 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+FEG EGAGKTT I + ++R+ Y V TREPGG AE R V+L+ + Sbjct: 2 SGMFITFEGPEGAGKTTVIRKVHEEMERQGYAVMATREPGGIDIAEQIREVILNEKNTKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR H+ + PAL G+ +LCDRF+DSS AYQG + S+ + Sbjct: 62 DAKTEALLYAAARRQHLAEKVEPALQRGETVLCDRFVDSSLAYQGYARGLGIDQVRSIND 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ MP TI + + GLKR+ + + + + + H+ R+ + + Sbjct: 122 FAIDGTMPQMTIYFSITPEEGLKRIHANQGREK----NRLDMETLNFHQLVREGYELLIA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H+VD++ Q V +L ++ + ++K Sbjct: 178 QSPERFHVVDASKPMQDVYEEVLRVIQDTLKK 209 >gi|297205016|ref|ZP_06922412.1| thymidylate kinase [Lactobacillus jensenii JV-V16] gi|297149594|gb|EFH29891.1| thymidylate kinase [Lactobacillus jensenii JV-V16] Length = 215 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKTT + L +++K ++ VTREPGG+ AEA R ++L+ E Sbjct: 2 AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G+++ DRF+DSS AYQG + + + Sbjct: 62 MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQGMGRNLGIEKVAEIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ GL R+ +E D E++ + H+K + +I Sbjct: 122 QFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQEIV 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R +VD++ V + L I+ + + Sbjct: 178 KRYPERIKVVDASQDIDQVVADCLAILKQQL 208 >gi|329939427|ref|ZP_08288763.1| integral membrane protein with kinase activity [Streptomyces griseoaurantiacus M045] gi|329301656|gb|EGG45550.1| integral membrane protein with kinase activity [Streptomyces griseoaurantiacus M045] Length = 1078 Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F++ EG +GAGK+T L +++ K ++V +T EPG TP + R +LL Sbjct: 503 TNGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTHEPGATPVGKRLRSILLDVSSAG 562 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 563 LSHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARIS 622 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P T++LD+ +R + D E + H + R FL +A Sbjct: 623 RWATNGLVPHLTVLLDVDPQAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 674 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD ++V T + + + ++ Sbjct: 675 AADPGRYLVVDGGQEPEAVTTAVRHRLDRML 705 >gi|303248931|ref|ZP_07335178.1| thymidylate kinase [Desulfovibrio fructosovorans JJ] gi|302489654|gb|EFL49590.1| thymidylate kinase [Desulfovibrio fructosovorans JJ] Length = 211 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 109/211 (51%), Gaps = 1/211 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG+GK+T I+LLK L+ V TR+PGG P E R +LLS Sbjct: 1 MFITFEGIEGSGKSTQITLLKSALEATGKSVVTTRQPGGCPLGETLRSILLSTQTKNLDH 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A R H+ VIRPA G I+LCDRF DS+ YQG L L +I+ Sbjct: 61 RAELFLYLADRAQHIAEVIRPAQNAGHIVLCDRFADSTVVYQGYGRGLDVAMLHELNDIA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V P TI+LDL + GL+R R + + FE +D+ H + R +L +A Sbjct: 121 VAGAWPQRTILLDLDPEQGLRRALARNLKTGNCATEGRFEAEDIDFHTRIRDGYLALASL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+ +VA + V + + Sbjct: 181 HPRRYAVIDATPDVATVAKAVWAAVSSRMSE 211 >gi|260434141|ref|ZP_05788112.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157] gi|260417969|gb|EEX11228.1| thymidylate kinase [Silicibacter lacuscaerulensis ITI-1157] Length = 210 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F++FEGI+G+GK+T +L L+ ++V +TREPGG+P AE R ++L D + Sbjct: 4 RGMFLTFEGIDGSGKSTQARMLAEHLRLSGHEVVLTREPGGSPGAEEIRRLVLEGDPDRW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL EGKI++CDRF DS+ YQG +D L + Sbjct: 64 SAETEILLFTAARRDHLERTIEPALAEGKIVICDRFADSTRMYQGLSRGDLRAIVDQLHQ 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ PD T+++D+ + GL R + R+ E FE + + R+ FL++A Sbjct: 124 LMIRR-EPDLTLLIDMDPETGLARAKGRHGGEE-----RFEDFGPDLQRRMRKGFLELAE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D SV+ ++ I + +Q+ Sbjct: 178 EFPERFRVIDGNRDMDSVSRDVTQIALQALQQ 209 >gi|192362258|ref|YP_001982459.1| thymidylate kinase [Cellvibrio japonicus Ueda107] gi|190688423|gb|ACE86101.1| thymidylate kinase [Cellvibrio japonicus Ueda107] Length = 213 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG F++ EG EG GK+T+++ ++ +L+ + ++ VTREPGGTP AE R++LL+ + Sbjct: 6 MQSGKFLTMEGTEGVGKSTNLAFVRAWLEARGIELIVTREPGGTPLAEEIRNLLLAKRTE 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++ AAR H+ VI+PAL G +L DRF D++YAYQG ++ L Sbjct: 66 PVDETAELLLVFAARAQHLAQVIKPALARGAWVLSDRFTDATYAYQGGGRGLSLAIIEQL 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + Q++ PD T++LD+ V GL+R R A LD FE + + E+ R + Sbjct: 126 ENLVQQQLRPDLTLVLDIDVQKGLERASQR------AELDRFESESLAFFERVRAAYHSR 179 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A P+R ++D+ S + V +I + +L+Q Sbjct: 180 AAMAPERYTLIDAGQSLERVQQDIAARLEQLIQ 212 >gi|77411409|ref|ZP_00787756.1| thymidylate kinase [Streptococcus agalactiae CJB111] gi|77162582|gb|EAO73546.1| thymidylate kinase [Streptococcus agalactiae CJB111] Length = 211 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 118/215 (54%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVVPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P ++GL+R+Q ++ + + + +H++ RQ +L+ Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSV----QREINRLDLEQLDMHQRVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A +P+R +D++ V +I+ + + + Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211 >gi|27262450|gb|AAN87506.1| Thymidylate kinase [Heliobacillus mobilis] Length = 241 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 111/211 (52%), Gaps = 7/211 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +GAGKTT +LL + + Y V TREPGGTP EAAR VLL + Sbjct: 31 GLFITLEGADGAGKTTQGALLAQAFRALQYPVLETREPGGTPVGEAARRVLLDPSLTGMA 90 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++AAAR + VI PAL G +++CDRF DS+ AYQG L S+ Sbjct: 91 PMAEVFLYAAARAQLIREVILPALAAGTVVICDRFTDSTLAYQGYGRGLDMDRLQSINHW 150 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + PD T++LD+ D GL R + + D E + H+K R FL++A Sbjct: 151 ATEGLAPDLTLLLDIDSDEGLSRARRK-------GADRMEMETAAFHQKVRHGFLELAAK 203 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + R ++ + V ++N V E V + Sbjct: 204 ETSRIRVIPAGRDIFEVHRQVINAVREKVPE 234 >gi|227894602|ref|ZP_04012407.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047] gi|227863593|gb|EEJ71014.1| thymidylate kinase [Lactobacillus ultunensis DSM 16047] Length = 216 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 121/213 (56%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + +L + R VTREPGG+ AE R ++L D+ Sbjct: 6 RGYFVSFEGPDGAGKSTVLKEVLAKISPRLKPQYLVTREPGGSKIAEKIRDIILDPANDK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AA+R HVE VI+PAL GKI+ DRF+DSS AYQGE + + Sbjct: 66 MDAKTEALLYAASRSQHVEEVIKPALAAGKIVFSDRFVDSSLAYQGEGRGLGIKEVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGLKR++ +E D E++++ H+K FL + Sbjct: 126 DFATDKLDPDLTFFLDVAPEIGLKRIEKLRPDQE----DRLEQENIAFHKKVYAGFLKVR 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PDR +D+ + V +++++ + + + Sbjct: 182 DMYPDRFVTIDATQPIEKVVDQVISVLEQRMPE 214 >gi|296453337|ref|YP_003660480.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301] gi|296182768|gb|ADG99649.1| dTMP kinase [Bifidobacterium longum subsp. longum JDM301] Length = 233 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 120/218 (55%), Gaps = 11/218 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL G Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ + S Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++PD T +LD+ + R+++ D E + RQ FLD Sbjct: 122 LSMWATNNLLPDRTYLLDMDPVLSHNRLEH--------AEDRMESAGSGFQSRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A +P+R H++D++ S + V + I + L++ V+ Sbjct: 174 LAAAEPNRFHVIDASQSIEQVWSAIEADIQTLLRDNVA 211 >gi|328883355|emb|CCA56594.1| Permeases of the major facilitator superfamily or Thymidylate kinase [Streptomyces venezuelae ATCC 10712] Length = 1162 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 535 TGFFIALEGGDGAGKSTQVQALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 594 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++++RPAL G I+L DR++DSS AYQG + + Sbjct: 595 SNRAEALLYAADRAEHVDSLVRPALERGAIVLSDRYIDSSVAYQGAGRDLSPTEIARISR 654 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 655 WATDGLVPHLTVVLDVSPETARERF--------TEAPDRLESEPPEFHARVRAGFLALAA 706 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T + + + ++ Sbjct: 707 ADPSRYLVVDAGQEPEAVTTVVRHRLDRML 736 >gi|22537716|ref|NP_688567.1| thymidylate kinase [Streptococcus agalactiae 2603V/R] gi|25011666|ref|NP_736061.1| thymidylate kinase [Streptococcus agalactiae NEM316] gi|76787087|ref|YP_330195.1| thymidylate kinase [Streptococcus agalactiae A909] gi|76799459|ref|ZP_00781603.1| thymidylate kinase [Streptococcus agalactiae 18RS21] gi|77408332|ref|ZP_00785074.1| thymidylate kinase [Streptococcus agalactiae COH1] gi|46576569|sp|Q8DYB3|KTHY_STRA5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576575|sp|Q8E3X8|KTHY_STRA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123601435|sp|Q3JZV8|KTHY_STRA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|22534605|gb|AAN00440.1|AE014263_19 thymidylate kinase [Streptococcus agalactiae 2603V/R] gi|24413206|emb|CAD47285.1| unknown [Streptococcus agalactiae NEM316] gi|76562144|gb|ABA44728.1| thymidylate kinase [Streptococcus agalactiae A909] gi|76585186|gb|EAO61800.1| thymidylate kinase [Streptococcus agalactiae 18RS21] gi|77173095|gb|EAO76222.1| thymidylate kinase [Streptococcus agalactiae COH1] gi|319745548|gb|EFV97850.1| thymidylate kinase [Streptococcus agalactiae ATCC 13813] Length = 211 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P ++GL+R+Q ++ + + + +H++ RQ +L+ Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQK----SVQREVNRLDLEQLDMHQRVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A ++P+R +D++ V +I+ + + + Sbjct: 177 LADSEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211 >gi|220932870|ref|YP_002509778.1| dTMP kinase [Halothermothrix orenii H 168] gi|254808299|sp|B8CZT1|KTHY_HALOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219994180|gb|ACL70783.1| dTMP kinase [Halothermothrix orenii H 168] Length = 207 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 119/210 (56%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+ EGIEG+GK+T I +L + L++ +DV +TREPGGTP + R +LL Sbjct: 2 RGLFITLEGIEGSGKSTQIEMLYKRLKKDGFDVIITREPGGTPIGKEIRKLLLDPDNI-M 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA+AE +++AA R HV +I+PAL GK++L DRF+DSS AYQG + ++ E Sbjct: 61 GAKAEFLLYAADRAQHVVELIKPALESGKVVLADRFIDSSIAYQGYGRGLDIDVVKTVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T +LDL V+ GL+R + D ER+ V H + RQ + +A Sbjct: 121 WVIDGCWPDLTFVLDLDVEKGLERAR---GYSPDNQGDRLERELVTFHRRVRQAYHQLAE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ R ++D+ S + + I + V + Sbjct: 178 DR--RFIMLDADRSREEIHREIYHKVKGCL 205 >gi|254489864|ref|ZP_05103059.1| thymidylate kinase [Methylophaga thiooxidans DMS010] gi|224464949|gb|EEF81203.1| thymidylate kinase [Methylophaga thiooxydans DMS010] Length = 206 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G FIS EGIEGAGK+T + ++ FL+ + V VTREPGGT E R +LL+ + Sbjct: 1 MN-GKFISIEGIEGAGKSTQMRFIQSFLEHQGKTVVVTREPGGTVLGEQIRELLLTPRDE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +AE ++ AAR +H+E VI+PAL G +L DRF+D+++AYQG ++S+ Sbjct: 60 GMSHDAELLLMFAARAEHLEQVIKPALSRGDWVLSDRFVDATFAYQGGGRGIDIKRIESI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++Q + D T++ DLPV +G +RV R + D FE++ + EK RQ +L Sbjct: 120 SDWTLQAIHTDLTLLFDLPVAVGQERVIKRSQDK-----DRFEQEKGVFFEKIRQCYLQR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A ++PDR +D+ + +++ + + L+ Sbjct: 175 ADHEPDRIKKIDAGQTIENIQHQVTTALMALL 206 >gi|126652958|ref|ZP_01725100.1| thymidylate kinase [Bacillus sp. B14905] gi|126590288|gb|EAZ84410.1| thymidylate kinase [Bacillus sp. B14905] Length = 215 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 118/213 (55%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S LFI+FEG EGAGKTT I + L N DV TREPGG AE R ++L+ Sbjct: 7 MKSNLFITFEGPEGAGKTTVIQKIAERLAEINIDVLATREPGGIEIAEKIRTIILNPAHT 66 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H ++PAL GK+++CDRF+DSS AYQG + S+ Sbjct: 67 AMDERTEALLYAAARSQHYFEKVQPALDAGKLVICDRFIDSSLAYQGYARGIGIDEVLSI 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + +PD TI+ D+ ++GL R+ + ++ + + + H+K + +L + Sbjct: 127 NEFAIGKKLPDMTILFDIAPEVGLARI----YATGNREVNRLDVESLPFHQKVHEGYLLL 182 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R IV++ SV ++ +++ + +Q Sbjct: 183 VERYPERIRIVNADQDIDSVVEDVWSLLLDAIQ 215 >gi|167755132|ref|ZP_02427259.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402] gi|237733442|ref|ZP_04563923.1| thymidylate kinase [Mollicutes bacterium D7] gi|167705182|gb|EDS19761.1| hypothetical protein CLORAM_00636 [Clostridium ramosum DSM 1402] gi|229383477|gb|EEO33568.1| thymidylate kinase [Coprobacillus sp. D7] Length = 206 Score = 259 bits (662), Expect = 3e-67, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +G+GKTT ++ LQ + Y V +TREPGG AE R ++L Sbjct: 2 KGKFITLEGPDGSGKTTVSKIVVEQLQMEGYKVLLTREPGGIDIAEQIRKIILDTNNITM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL +G I++CDRF+DSS YQG + + + Sbjct: 62 DARTEALLYAAARRQHLVEKVAPALNDGYIVICDRFVDSSLVYQGVGRKIGIEEVYQINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + PD TI DLP ++GL R+ N D + + H+ ++ I Sbjct: 122 FAIGNIKPDATIFFDLPYEVGLARINN-----GERVADRLDLESDDFHKDVYNGYMTICE 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +R +D++ + V ++N++ + Sbjct: 177 KYAERITKIDASKTIDEVVAQVINVIKSKL 206 >gi|319946509|ref|ZP_08020745.1| thymidylate kinase [Streptococcus australis ATCC 700641] gi|319747340|gb|EFV99597.1| thymidylate kinase [Streptococcus australis ATCC 700641] Length = 212 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G IS EG EGAGK++ + L L++ TREPGG AE R V+L Sbjct: 1 MKQGTLISIEGPEGAGKSSVLEALLPRLEKAGIAYITTREPGGVTIAEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG ++ L Sbjct: 61 EMDPKTELLLYIASRRQHLAERVLPALEAGKLVIMDRFIDSSVAYQGFGRGLAVTDIEWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + P+ T D+ V+ GL R+ S ++ + + + +H+K RQ +L I Sbjct: 121 NQFATDGLKPNRTFYFDIDVEEGLARIAK----SASREVNRLDLEGLSLHQKVRQGYLVI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +D++ F V + +V E+++ Sbjct: 177 LEKEPQRVVKIDASQPFDKVVEDTWILVKEVLE 209 >gi|321313698|ref|YP_004205985.1| thymidylate kinase [Bacillus subtilis BSn5] gi|320019972|gb|ADV94958.1| thymidylate kinase [Bacillus subtilis BSn5] Length = 212 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVTATREPGGIDIAEQIREVILNENNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG + S+ E Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++MP T+ + + GLKR+ S + + + + + H K ++ + ++ + Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H VD+ S V ++L ++ E ++K Sbjct: 178 RFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209 >gi|297159269|gb|ADI08981.1| putative thymidylate kinase [Streptomyces bingchenggensis BCW-1] Length = 1080 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI EG +GAGKTT + L +++ K ++V VTREPG T + R +LL Sbjct: 499 TGFFIVVEGGDGAGKTTQVEALAEWIRGKGHEVVVTREPGATAIGKRLRSILLDVSSAGI 558 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G +++ DR++DSS AYQG + + Sbjct: 559 SHRAEALLYAADRAEHVDSVVRPALERGAVVISDRYIDSSVAYQGAGRDLAPTEIARISR 618 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H++ R FL +A Sbjct: 619 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHQRVRNGFLTLAA 670 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V + + + ++ Sbjct: 671 ADPARYLVVDAGQLPEAVTAVVRHRLDLVL 700 >gi|294813363|ref|ZP_06772006.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064] gi|326441702|ref|ZP_08216436.1| thymidylate kinase [Streptomyces clavuligerus ATCC 27064] gi|294325962|gb|EFG07605.1| Thymidylate kinase [Streptomyces clavuligerus ATCC 27064] Length = 1131 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 535 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 594 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV +V+RPAL G +++ DR++DSS AYQG + + Sbjct: 595 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 654 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 655 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 706 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T + + + +++ Sbjct: 707 GDPARYLVVDAGQEPEAVTTVVRHRLDQML 736 >gi|254283811|ref|ZP_04958779.1| thymidylate kinase [gamma proteobacterium NOR51-B] gi|219680014|gb|EED36363.1| thymidylate kinase [gamma proteobacterium NOR51-B] Length = 208 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 121/211 (57%), Gaps = 6/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G F++ EG EG GK+T++ + + L+ + D+ VTREPGGTP AEA R +L+S D Sbjct: 1 MKPGQFLTVEGGEGVGKSTNLDFIAKTLRAQGIDLVVTREPGGTPLAEALRALLISDSED 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++ AAR H+ VI PAL G+ +LCDRF D+++AYQG + +++L Sbjct: 61 PPCPNAELLMIFAARAQHLSTVIEPALKAGRWVLCDRFTDATFAYQGAGRGIEWSSIETL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T++LD+ IG+ R +R LD FER+ + ++ R+ + Sbjct: 121 ENLIQGDRRPDLTLLLDMEPAIGMDRAGSR------GALDRFEREALPFFDRVRRGYKTR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R ++D++ S +V +I ++ EL Sbjct: 175 AAQAPHRYRVIDASQSIDAVQRDIARVLAEL 205 >gi|167465293|ref|ZP_02330382.1| dTMP kinase [Paenibacillus larvae subsp. larvae BRL-230010] gi|322381217|ref|ZP_08055220.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321154793|gb|EFX47064.1| thymidylate kinase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 221 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 123/217 (56%), Gaps = 5/217 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F++FEG +G+GKTT I LL L ++ + V TREPGGTP ++ R ++LS E Sbjct: 2 KGVFVTFEGPDGSGKTTQIRLLADALNKQGFQVLQTREPGGTPISDQIRSLILSPEHQEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +++AA+R HV VI PAL +GKI+LCDRF+D+S AYQ + + + Sbjct: 62 KDQTEVLLYAASRAQHVHEVILPALKQGKIVLCDRFIDASLAYQAYGLGIEFESVIEVNR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T +LD+PV+I R+ R LD E+K H++ R+ F I + Sbjct: 122 FASSGLLPNRTYLLDVPVEISRSRLTRRE-----EGLDRIEQKGRDYHQRVREGFHQIYK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 P+R ++++ + + +A I + ++ ++ + Sbjct: 177 ENPERICLIEAEGNVEDIALRIQTDFFSWLKGKIGKM 213 >gi|152996289|ref|YP_001341124.1| dTMP kinase [Marinomonas sp. MWYL1] gi|189028836|sp|A6VXL0|KTHY_MARMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150837213|gb|ABR71189.1| dTMP kinase [Marinomonas sp. MWYL1] Length = 212 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 6/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FIS EG EG+GKTT I ++++L +TREPGGTP AE R ++L+ + Sbjct: 2 RGKFISLEGGEGSGKTTAIHFIRQWLDDHKIPYIMTREPGGTPLAEEIRQLVLTPRDESV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR H+ I+PAL +G ++ DRFLDSSY YQG+ LD L Sbjct: 62 NDVTELLLVFAARAQHLAEKIQPALEKGTWVISDRFLDSSYVYQGKARGGDIAMLDQLAN 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + PD T++LD+PV++G +RV R D +++ H+K R FL+ A Sbjct: 122 WVVGDNKPDATLVLDVPVELGQERVVQRQHQ------DRLDKESFAFHQKVRDGFLERAE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P R IVD++ S +SV + I + +L Sbjct: 176 ADPKRVKIVDASQSLESVKSQIEEQLAKL 204 >gi|256852109|ref|ZP_05557496.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN] gi|260661321|ref|ZP_05862234.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN] gi|282934782|ref|ZP_06340020.1| dTMP kinase [Lactobacillus jensenii 208-1] gi|256615521|gb|EEU20711.1| thymidylate kinase [Lactobacillus jensenii 27-2-CHN] gi|260547776|gb|EEX23753.1| thymidylate kinase [Lactobacillus jensenii 115-3-CHN] gi|281301145|gb|EFA93451.1| dTMP kinase [Lactobacillus jensenii 208-1] Length = 215 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 117/211 (55%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKTT + L +++K ++ VTREPGG+ AEA R ++L+ E Sbjct: 2 AGYFITFEGPDGAGKTTVLEKLVEEIKKKVTCEILVTREPGGSKIAEAIRDIILNPENTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G+++ DRF+DSS AYQG + + + Sbjct: 62 MDDRTEALLYAAARSQHMAEVVFPALEAGRLVFSDRFVDSSLAYQGMGRNLGIEKVAEIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ GL R+ +E D E++ + H+K + +I Sbjct: 122 QFATDGLNPNLTLFLDIDPKAGLARIAKVRPDKE----DRLEKEKLSFHQKVYTGYQEIV 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R +VD++ V + L I+ + + Sbjct: 178 KRYPERIKVVDASQDIDQVIADCLAILKQQL 208 >gi|325982933|ref|YP_004295335.1| thymidylate kinase [Nitrosomonas sp. AL212] gi|325532452|gb|ADZ27173.1| thymidylate kinase [Nitrosomonas sp. AL212] Length = 208 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 110/212 (51%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G F++ EGI+GAGK+T + + LQR VTREPGGT E R +LL Sbjct: 1 MKQGKFLTLEGIDGAGKSTQLVWIAELLQRAGLSAVVTREPGGTLLGEQLRALLLD-KFI 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA++ AAR +H++ VI PAL +G+ ++ DRF D+S+AYQ L L Sbjct: 60 SMHPETEALLMFAARREHLDKVIFPALAQGQWVISDRFTDASFAYQSGGRGLDSAKLVIL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T+ D+P D+G +RV +D FE++ + R +LD Sbjct: 120 EQWVQGALQPDLTLYFDVPADVGQQRVS------RGGVVDRFEQEQADFFLRVRAAYLDR 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A+ PDR I+DS S V + I+ L+ Sbjct: 174 AQQFPDRIKIIDSNRSLPEVKVAVEQILQPLL 205 >gi|224369769|ref|YP_002603933.1| Tmk [Desulfobacterium autotrophicum HRM2] gi|259494266|sp|C0QI33|KTHY_DESAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|223692486|gb|ACN15769.1| Tmk [Desulfobacterium autotrophicum HRM2] Length = 227 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 1/209 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEG+GKTT I L L + Y+ VTREPG T + R +LL G Sbjct: 1 MFITLEGIEGSGKTTQIKPLVDCLGQNGYEAVVTREPGATVIGKKIRAILLDPGNSGMSD 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A R H+ VI PAL GK ++CDRF D++ YQG +D + + Sbjct: 61 LCELFLYGADRAQHLSEVIIPALGAGKTVVCDRFTDATTVYQGAARGISKELIDIIHSVV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V+++ PD TI+ DL + GL R V+ + FER+ + HE+ RQ +L +A Sbjct: 121 VKDLCPDLTILFDLDPETGLARTVKALTDGERTLDESRFERETLEFHERVRQGYLALAAA 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + DR +VD+ + + V T I++ + + Sbjct: 181 EQDRFLVVDARGTQEQVFTEIVSGINRRL 209 >gi|195978711|ref|YP_002123955.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975416|gb|ACG62942.1| thymidylate kinase Tmk [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 232 Score = 258 bits (661), Expect = 3e-67, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+FEG +GAGKTT + L LQ + TREPGG AE R ++L Sbjct: 22 MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 81 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I PAL G ++L DRF+DSS AYQG + Sbjct: 82 TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 141 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + V PD T+ D+P ++GL R+ ++ + + + +H++ R+ +L+ Sbjct: 142 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE----REINRLDLEQLDLHQRVRKGYLE 197 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A P R +D++ +SV + L + Sbjct: 198 LALENPQRIVKIDASQDLESVVSAALAAI 226 >gi|318060890|ref|ZP_07979611.1| thymidylate kinase [Streptomyces sp. SA3_actG] Length = 1199 Score = 258 bits (661), Expect = 4e-67, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 526 TTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAG 585 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G I++ DR++DSS AYQG + + + Sbjct: 586 LSHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARIS 645 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LD+ + +R + D E + H + R FL +A Sbjct: 646 RWATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 697 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +VD A +SV + + + +L+ Sbjct: 698 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 728 >gi|319939588|ref|ZP_08013947.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV] gi|319811177|gb|EFW07483.1| thymidylate kinase [Streptococcus anginosus 1_2_62CV] Length = 212 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G+FIS EG +GAGK++ + L L+ K TREPGG AE R V+L Sbjct: 1 MSKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ I PAL G+++L DRF+DSS AYQG + +D L Sbjct: 61 EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ + D +R+ V H++ R+ +L I Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAK----SKERGADRLDRESVEWHQRVREGYLSI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +P+R +D++ + V + L ++ E V+ Sbjct: 177 LKKEPNRVRKIDASQPLEKVVADTLAVLAEHVE 209 >gi|290958517|ref|YP_003489699.1| thymidylate kinase [Streptomyces scabiei 87.22] gi|260648043|emb|CBG71151.1| putative thymidylate kinase [Streptomyces scabiei 87.22] Length = 1110 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 8/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 508 TGFFIALEGGDGAGKSTQVEALAEWVRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + HE+ R FL +A Sbjct: 628 WATDGLVPHLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHERVRAGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 R +VD+A ++V T + + Sbjct: 680 ADAGRYLVVDAAQDPEAVTTVVRARL 705 >gi|315037614|ref|YP_004031182.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112] gi|325956093|ref|YP_004286703.1| thymidylate kinase [Lactobacillus acidophilus 30SC] gi|312275747|gb|ADQ58387.1| thymidylate kinase [Lactobacillus amylovorus GRL 1112] gi|325332658|gb|ADZ06566.1| thymidylate kinase [Lactobacillus acidophilus 30SC] Length = 212 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 118/213 (55%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F+SFEG +GAGK+T + +L + + VTREPGG+ AE R ++L D+ Sbjct: 2 TGYFVSFEGPDGAGKSTVLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPANDK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AAAR HVE +I+PAL GKI+ DRF+DSS AYQGE + + Sbjct: 62 MDAKTEALLYAAARSQHVEEIIKPALEAGKIVFSDRFVDSSLAYQGEGRDLGIKEVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T +D+ +IGL R+Q +E D E++++ H+K Q FL + Sbjct: 122 DFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHKKVYQGFLKVR 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R +D V ++ + + + + Sbjct: 178 AMYPERFVTIDGTQPIDQVVDQVITTLKQRMPE 210 >gi|238855359|ref|ZP_04645671.1| dTMP kinase [Lactobacillus jensenii 269-3] gi|260664925|ref|ZP_05865776.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US] gi|282934589|ref|ZP_06339836.1| dTMP kinase [Lactobacillus jensenii 208-1] gi|313472529|ref|ZP_07813019.1| dTMP kinase [Lactobacillus jensenii 1153] gi|238832020|gb|EEQ24345.1| dTMP kinase [Lactobacillus jensenii 269-3] gi|239529963|gb|EEQ68964.1| dTMP kinase [Lactobacillus jensenii 1153] gi|260561408|gb|EEX27381.1| thymidylate kinase [Lactobacillus jensenii SJ-7A-US] gi|281301341|gb|EFA93638.1| dTMP kinase [Lactobacillus jensenii 208-1] Length = 215 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKTT + L ++ + ++ VTREPGG+ AEA R ++L E Sbjct: 2 AGYFITFEGPDGAGKTTVLEKLIEKIKEQVTCEILVTREPGGSKIAEAIREIILDPENTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL GK++ DRF+DSS AYQG + + + Sbjct: 62 MDDRTEALLYAAARSQHMAEVVFPALEAGKLVFSDRFVDSSLAYQGMGRNLGIDKVAEIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ + GL R+ +E D E++ + H+K + +I Sbjct: 122 QFATDGLNPDLTLFLDIKPEDGLARIAKVRPDKE----DRLEKEKLSFHKKVYTGYQEIV 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R +VD++ V + L I+ + + Sbjct: 178 KKYPERIKVVDASQDVDYVVADCLTILKQQL 208 >gi|262047567|ref|ZP_06020522.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US] gi|293379956|ref|ZP_06626057.1| thymidylate kinase [Lactobacillus crispatus 214-1] gi|312977918|ref|ZP_07789664.1| dTMP kinase [Lactobacillus crispatus CTV-05] gi|260572143|gb|EEX28708.1| thymidylate kinase [Lactobacillus crispatus MV-3A-US] gi|290923469|gb|EFE00371.1| thymidylate kinase [Lactobacillus crispatus 214-1] gi|310895225|gb|EFQ44293.1| dTMP kinase [Lactobacillus crispatus CTV-05] Length = 212 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 11/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58 G F+SFEG +GAGK+T LK L + + VTREPGG+ AE R ++L Sbjct: 2 RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPA 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + Sbjct: 59 NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + ++ PD T LDL ++GLKR++ +E D E++++ H+K FL Sbjct: 119 QINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P+R VD+ V ++ I+ + + + Sbjct: 175 KVKEMYPERFVTVDATQPIDQVVAQVIAILKQRMPE 210 >gi|150387935|ref|YP_001317984.1| dTMP kinase [Alkaliphilus metalliredigens QYMF] gi|149947797|gb|ABR46325.1| dTMP kinase [Alkaliphilus metalliredigens QYMF] Length = 211 Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 116/214 (54%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFISFEG++GAGK+T I K F + + Y V +TREPGGT +E R +L Sbjct: 1 MKNGLFISFEGVDGAGKSTQIHYAKDFFEERGYKVSLTREPGGTRISEIIREAILDRTHQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R HVE I PAL EG+++LCDRF+DSS YQG + ++ Sbjct: 61 EMTHRTEALLYAASRAQHVEEFILPALAEGRVVLCDRFVDSSMVYQGRGRGLGFDAVRNI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD TI ++ + L R+ + D E++ + H + + D+ Sbjct: 121 NQFATGGLEPDLTIFFNIHPQVSLGRINVK------EKGDRLEQEKMAFHYTVYESYHDL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A+ R ++++ + + + + I+ L+++ Sbjct: 175 AQMNSSRIKVIEANQEVEKIKSEVEKIMTNLLRR 208 >gi|296388546|ref|ZP_06878021.1| thymidylate kinase [Pseudomonas aeruginosa PAb1] Length = 210 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ G + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + + +L+ Sbjct: 62 AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|49078908|gb|AAT49833.1| PA2962 [synthetic construct] Length = 211 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L+ Sbjct: 62 AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|29831165|ref|NP_825799.1| thymidylate kinase [Streptomyces avermitilis MA-4680] gi|29608279|dbj|BAC72334.1| putative thymidylate kinase [Streptomyces avermitilis MA-4680] Length = 1073 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 109/210 (51%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 508 SGFFIALEGGDGAGKSTQAEALAEWIRAKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 567 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 568 SHRAEALLYAADRAEHVDTVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEVARISR 627 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 628 WATNGLVPHLTVLLDVAPETARERF--------TEAPDRLESEPAEFHARVRSGFLTLAA 679 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R IVD+ ++V T I + + L+ Sbjct: 680 ADLGRYLIVDAGQEPEAVTTVIRHRLDTLL 709 >gi|239989562|ref|ZP_04710226.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 11379] Length = 1070 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 557 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +R + D E + HE+ R FL +A Sbjct: 617 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAEFHERVRSGFLTLAA 668 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ +S+ T + + + +L+ Sbjct: 669 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 698 >gi|319783485|ref|YP_004142961.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169373|gb|ADV12911.1| thymidylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 231 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 99/202 (49%), Positives = 134/202 (66%), Gaps = 2/202 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EGAGK+T I L R ++ K YDV +TREPGG+P AEA RHVLLS + Sbjct: 8 LARGFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 67 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG + EA++FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+D+L Sbjct: 68 PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMDAL 127 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++++ +MPD T+I D+ GL+R R A D FE++ + IH+ RR+ FL I Sbjct: 128 EQVAINGMMPDMTLIFDIDPAEGLRRATLRRGAE--AVADRFEKETLAIHQARREAFLAI 185 Query: 181 ARNQPDRCHIVDSAHSFQSVAT 202 A+ +P+RC +VD+A +V Sbjct: 186 AKAEPERCIVVDAAAEPDAVEN 207 >gi|331012636|gb|EGH92692.1| thymidylate kinase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 210 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF + EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFFTLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R +VD+A V ++ ++ +L++ R Sbjct: 176 ADPARYRLVDAAQPLADVQASLDTLLPQLLELR 208 >gi|75908183|ref|YP_322479.1| thymidylate kinase [Anabaena variabilis ATCC 29413] gi|123609755|sp|Q3MBQ2|KTHY_ANAVT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|75701908|gb|ABA21584.1| thymidylate kinase [Anabaena variabilis ATCC 29413] Length = 211 Score = 258 bits (660), Expect = 5e-67, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 6/215 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG+EG GKT+ + L +LQ V +TREPGGT R +LL D+ Sbjct: 2 GGRFIVFEGVEGCGKTSQMQLCAEWLQNLGISVILTREPGGTELGVDLRRLLLQKAEDKP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E +++AA R HV ++P L +GK +LCDR++DS+ AYQG + + L Sbjct: 62 IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +I+ + D TI LD+ V++GL R + E+ LD E++ + H + +Q + ++A Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----ENVGLDRIEQETIAFHRRVQQGYANLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P R VD S ++V I I+ +++ + Sbjct: 177 ASSPSRIIRVDGQLSKETVHKTIQEILSPHLKEWL 211 >gi|227877632|ref|ZP_03995685.1| thymidylate kinase [Lactobacillus crispatus JV-V01] gi|256849085|ref|ZP_05554518.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US] gi|227862780|gb|EEJ70246.1| thymidylate kinase [Lactobacillus crispatus JV-V01] gi|256713861|gb|EEU28849.1| thymidylate kinase [Lactobacillus crispatus MV-1A-US] Length = 216 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 118/216 (54%), Gaps = 11/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCG 58 G F+SFEG +GAGK+T LK L + + VTREPGG+ AE R ++L Sbjct: 6 RGYFVSFEGPDGAGKSTV---LKEVLNQIGSELETQYLVTREPGGSKIAEKIRDIILDPA 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ + EA+++AA+R HVE +IRPAL EGK++ DR++DSS AYQG + Sbjct: 63 NDKMDNKTEALLYAASRSQHVEEIIRPALKEGKVVFSDRYVDSSLAYQGAGRDLGIQEVK 122 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + ++ PD T LDL ++GLKR++ +E D E++++ H+K FL Sbjct: 123 QINDFATDKLDPDLTFFLDLAPEVGLKRIEKLRPGQE----DRLEQENLAFHKKVYAGFL 178 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P+R VD+ V ++ I+ + + + Sbjct: 179 KVKEMYPERFVTVDATQPIDQVVAQVIAILKQRMPE 214 >gi|331005272|ref|ZP_08328664.1| Thymidylate kinase [gamma proteobacterium IMCC1989] gi|330420949|gb|EGG95223.1| Thymidylate kinase [gamma proteobacterium IMCC1989] Length = 211 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F++ EG EG GK+T+I+ ++ +L + +V TREPGGTP AE R +LL ++ Sbjct: 6 TRGKFLTIEGTEGVGKSTNIAYIQSYLTSQGIEVLTTREPGGTPLAEDIRELLLQNRDEK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR H++ VI PAL G+ +LCDRF D++YAYQG ++ L+ Sbjct: 66 MDETAELLLVFAARAQHLQTVILPALERGQWVLCDRFTDATYAYQGGGRGLDLALIEMLE 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ PD T++LD+ V IGL+R R LD FE + V EK R +L A Sbjct: 126 QRIQGDIRPDLTLLLDIDVTIGLERAGRR------GELDRFEHEHVAFFEKVRHAYLARA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +VD++ S + V + + + +Q Sbjct: 180 ATFPERYGVVDASQSLEQVQLQVRDHLAHFLQ 211 >gi|302535280|ref|ZP_07287622.1| integral membrane protein with kinase activity [Streptomyces sp. C] gi|302444175|gb|EFL15991.1| integral membrane protein with kinase activity [Streptomyces sp. C] Length = 1094 Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 114/211 (54%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 514 TTGFFIALEGGDGAGKSTQVQALAEWIRGKGHEVVVTREPGATPVGKRLRSILLDISSAG 573 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV++++RPAL G +++ DR++DSS AYQG + + Sbjct: 574 LSNRAEALLYAADRAEHVDSLVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARIS 633 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LD+ + +R + D E + H++ R FL +A Sbjct: 634 RWATGGLVPNLTVLLDVSPETARERF--------TEAPDRLESEPTEFHQRVRAGFLTLA 685 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ SV T +L+ + ++ Sbjct: 686 AADPGRYLVVDAGQDPGSVTTVVLHRLDRML 716 >gi|15598158|ref|NP_251652.1| thymidylate kinase [Pseudomonas aeruginosa PAO1] gi|107102512|ref|ZP_01366430.1| hypothetical protein PaerPA_01003575 [Pseudomonas aeruginosa PACS2] gi|218890840|ref|YP_002439704.1| thymidylate kinase [Pseudomonas aeruginosa LESB58] gi|254235937|ref|ZP_04929260.1| thymidylate kinase [Pseudomonas aeruginosa C3719] gi|313108146|ref|ZP_07794281.1| thymidylate kinase [Pseudomonas aeruginosa 39016] gi|14285514|sp|Q9HZN8|KTHY_PSEAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732662|sp|B7V167|KTHY_PSEA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|9949060|gb|AAG06350.1|AE004722_6 thymidylate kinase [Pseudomonas aeruginosa PAO1] gi|126167868|gb|EAZ53379.1| thymidylate kinase [Pseudomonas aeruginosa C3719] gi|218771063|emb|CAW26828.1| thymidylate kinase [Pseudomonas aeruginosa LESB58] gi|310880783|gb|EFQ39377.1| thymidylate kinase [Pseudomonas aeruginosa 39016] Length = 210 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L+ Sbjct: 62 AADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|77406664|ref|ZP_00783707.1| thymidylate kinase [Streptococcus agalactiae H36B] gi|77174736|gb|EAO77562.1| thymidylate kinase [Streptococcus agalactiae H36B] Length = 211 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 118/215 (54%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P ++GL+R+Q ++ + + + +H++ RQ +L+ Sbjct: 121 LNDYATDSHKPDLTLYFDVPSEVGLERIQKSV----QREVNRLDLEQLDMHQRVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A +P+R +D++ V +I+ + + + Sbjct: 177 LADLEPNRIVTIDASQQLDEVIAETFSIILDRINQ 211 >gi|302878048|ref|YP_003846612.1| thymidylate kinase [Gallionella capsiferriformans ES-2] gi|302580837|gb|ADL54848.1| thymidylate kinase [Gallionella capsiferriformans ES-2] Length = 200 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 11/207 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+FEG++GAGK+TH++ L++ DV VTREPGGTP E R +LL+ Sbjct: 3 KFITFEGVDGAGKSTHLAWFAATLRQHGVDVVVTREPGGTPLGEQLREMLLNQ---PMSI 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++ AAR++HVE +I+PAL+ GK ++ DRF D+S+AYQG L L++ Sbjct: 60 GTEAMLMFAARVEHVEQIIKPALLAGKWVISDRFSDASFAYQGGGRGMDWDKLRQLEQWV 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD T+ D+PV++ R+ N S LD FE++ E+ R + Sbjct: 120 --DLRPDLTLFFDVPVEVARARLSNNVS------LDRFEQEQGEFFERVRAGYHRRVAEN 171 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P R ++D+A S V + +IV L Sbjct: 172 PPRYAVIDAAQSIALVQQQLQSIVANL 198 >gi|225166283|ref|ZP_03727978.1| dTMP kinase [Opitutaceae bacterium TAV2] gi|224799474|gb|EEG18008.1| dTMP kinase [Opitutaceae bacterium TAV2] Length = 234 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDE 61 +G IS EG EG GK+T I+ L + +Q DV TREPGGT E R++++ DE Sbjct: 9 TGKLISLEGPEGCGKSTQIARLAKHIQLLGRDVFCTREPGGTEIGEQVRNIIVHNSKGDE 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E ++FAA+R V VI P L+ G+I+L DRFLDSS YQG + ++ + Sbjct: 69 MCAETELLLFAASRAQLVREVIAPRLLRGEIVLSDRFLDSSTVYQGVARNLAMDPVNLIN 128 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +V VMPD TIILD+P ++ L R+ R S D ER+++ + K R+ +L +A Sbjct: 129 QFAVGNVMPDLTIILDVPPEVSLARINRRA----SDLPDRMERENIDFYHKVREGYLFLA 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ P ++D + VA +I + V +L+ K Sbjct: 185 KSLPRAFLVLDGTQTEDEVAKHIWDEVLKLITK 217 >gi|83644968|ref|YP_433403.1| thymidylate kinase [Hahella chejuensis KCTC 2396] gi|123533767|sp|Q2SK46|KTHY_HAHCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|83633011|gb|ABC28978.1| thymidylate kinase [Hahella chejuensis KCTC 2396] Length = 208 Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EGIEGAGKTT+++ ++ L+ +V +TREPGGTP AE R +LL + Sbjct: 1 MKKGLFITVEGIEGAGKTTNLNFIRSILEESGEEVVMTREPGGTPMAEEVRELLLRPREE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE ++ AAR H+E I+P + G +L DRF D++YAYQG + L Sbjct: 61 AVSSTAELLLMFAARAQHLEQKIKPTIERGVHVLSDRFTDATYAYQGGGRGLSWAMIQDL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ PD T++L + + G+ R + R LD FER+ + + ++ ++ Sbjct: 121 EKLVQAGFKPDLTLLLRIDPETGMARARKR------GALDRFEREKLEFYFCVQEGYMKR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +VD+ S + V I + + Sbjct: 175 VAEDPERFLVVDAQQSLEEVQAAIAQGLAAKL 206 >gi|239943104|ref|ZP_04695041.1| putative thymidylate kinase [Streptomyces roseosporus NRRL 15998] Length = 1042 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 469 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 528 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 529 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 588 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +R + D E + HE+ R FL +A Sbjct: 589 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAEFHERVRSGFLTLAA 640 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ +S+ T + + + +L+ Sbjct: 641 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 670 >gi|71907819|ref|YP_285406.1| thymidylate kinase [Dechloromonas aromatica RCB] gi|123627287|sp|Q47DZ5|KTHY_DECAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71847440|gb|AAZ46936.1| thymidylate kinase [Dechloromonas aromatica RCB] Length = 204 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 8/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+GAGK++H+ L L+++ VHVTREPGGT E R +LL+ + Sbjct: 2 KGKFITFEGIDGAGKSSHVEWLAGLLRQRGIVVHVTREPGGTELGEKLRELLLN---EPM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR +H+ +I PAL G+ ++CDRF D++YAYQG +L+ Sbjct: 59 HLETETLLMFAARREHLARLIEPALARGEWVVCDRFSDATYAYQGGGRGLDRAKFLALEH 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++ DLP+D+ +R+ + + LD FE++ V HE+ RQ +L+ A Sbjct: 119 WVHGHLQPDLTLLFDLPLDVARERI-----VLANRVLDKFEQERVDFHERVRQAYLERAH 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R ++D+ S +++ + IV Sbjct: 174 TSPSRIRVIDANQSIENIRKQLEQIV 199 >gi|116050964|ref|YP_790211.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14] gi|122260093|sp|Q02PC5|KTHY_PSEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|115586185|gb|ABJ12200.1| thymidylate kinase [Pseudomonas aeruginosa UCBPP-PA14] Length = 210 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ G + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPGDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + + +L+ Sbjct: 62 AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEVRIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + ++ L+++ Sbjct: 176 QAPERYQVLDAGLPLTEVQAGLDRLLPNLLER 207 >gi|302520927|ref|ZP_07273269.1| thymidylate kinase [Streptomyces sp. SPB78] gi|302429822|gb|EFL01638.1| thymidylate kinase [Streptomyces sp. SPB78] Length = 1202 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 525 TTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAG 584 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G I++ DR++DSS AYQG + + + Sbjct: 585 LSHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARIS 644 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LD+ + +R + D E + H + R FL +A Sbjct: 645 RWATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 696 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +VD A +SV + + + +L+ Sbjct: 697 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 727 >gi|88798792|ref|ZP_01114375.1| Thymidylate kinase [Reinekea sp. MED297] gi|88778555|gb|EAR09747.1| Thymidylate kinase [Reinekea sp. MED297] Length = 206 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 6/204 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG+EGAGKTT +L +L + TREPGGTP AE R ++L+ + Sbjct: 5 FITIEGLEGAGKTTQAEVLCNWLTDRGISFVRTREPGGTPIAEKIRDLVLAHHDERMDPY 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR HVE +I+PAL+ G+ ++ DRF D++YAYQG S ++ L+++ + Sbjct: 65 TELLMVFAARQQHVETLIKPALVNGQWVVSDRFTDATYAYQGGGRSLGANYIQQLEQLVL 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T D GL R + R LD E++ + + R + A QP Sbjct: 125 GGFQPDTTFWFDCDAQTGLNRARAR------GSLDRIEQEALSFFNRARAAYEQRALQQP 178 Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209 R +D++ + ++V+ ++ + Sbjct: 179 QRFVRLDASQTVEAVSEQLIQALE 202 >gi|303257416|ref|ZP_07343429.1| dTMP kinase [Burkholderiales bacterium 1_1_47] gi|302859773|gb|EFL82851.1| dTMP kinase [Burkholderiales bacterium 1_1_47] Length = 202 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 11/211 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG++GAGK+T ++ L+ + D TREPGG +AE R +LL+ + Sbjct: 3 KRGKFITVEGVDGAGKSTQFEVIANALKERGIDFVRTREPGGPQSAEKIRELLLN---EP 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ E +V AAR +++ +IRPAL GK +LCDRF D+S AYQG ++ L Sbjct: 60 MTAKCELLVMFAARQENLTKIIRPALEAGKWVLCDRFTDASVAYQGYGRGRSLEEIEMLA 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+I DLP ++ R+ S LD FE++D H + RQ +L+IA Sbjct: 120 NFVHPDIKPDKTVIFDLPTEVAAARL--------SRKLDRFEQEDADFHRRVRQGYLEIA 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +P+RC ++D+ + + V+ +L V V Sbjct: 172 KREPERCVVIDAQGTPEEVSARVLKEVETWV 202 >gi|297543636|ref|YP_003675938.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841411|gb|ADH59927.1| thymidylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 204 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I LK +L +K Y++ V REPGGT E R +LL + Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLD-KYNFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PA+ EGKI+L DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPAIKEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R D ER+ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLERESWDFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +D V +I++ V + + Sbjct: 174 EYPKRFVFIDGMQEIVKVHQDIIDAVKKYL 203 >gi|308171919|ref|YP_003918624.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7] gi|307604783|emb|CBI41154.1| thymidylate kinase [Bacillus amyloliquefaciens DSM 7] gi|328551729|gb|AEB22221.1| thymidylate kinase [Bacillus amyloliquefaciens TA208] gi|328909989|gb|AEB61585.1| thymidylate kinase [Bacillus amyloliquefaciens LL3] Length = 212 Score = 257 bits (658), Expect = 7e-67, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKDILSAEGHPVTATREPGGIDIAEQIREVILNKNNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR H+ ++PAL EG+I+LCDRF+DSS AYQG + S+ Sbjct: 62 DAKTEALLYAAARRQHLVEKVQPALKEGRIVLCDRFIDSSLAYQGYARGLGIDEVFSINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + MPD TI + + GLKR+ + +S + + + + H K R+ + + + Sbjct: 122 FAIGDTMPDVTIYFSIDPEEGLKRITSN----DSREKNRLDLEALHFHTKVREGYQKVMQ 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H +D++ + V + L ++ E ++K Sbjct: 178 RFPERFHTIDASRKKEFVIQDALQVINEALKK 209 >gi|221307837|ref|ZP_03589684.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221312159|ref|ZP_03593964.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317092|ref|ZP_03598386.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. JH642] gi|221321355|ref|ZP_03602649.1| thymidylate kinase [Bacillus subtilis subsp. subtilis str. SMY] gi|255767017|ref|NP_387909.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|239938655|sp|P37537|KTHY_BACSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225184644|emb|CAB11804.2| thymidylate kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 212 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG + S+ E Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++MP T+ + + GLKR+ S + + + + + H K ++ + ++ + Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H VD+ S V ++L ++ E ++K Sbjct: 178 RFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209 >gi|315639687|ref|ZP_07894827.1| thymidylate kinase [Enterococcus italicus DSM 15952] gi|315484648|gb|EFU75104.1| thymidylate kinase [Enterococcus italicus DSM 15952] Length = 214 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 5/208 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLFI+ EG +GAGKTT ++ L L+++ N V TREPGG +E R ++L +E Sbjct: 2 SGLFITIEGPDGAGKTTALNELFPRLEKETNRKVIATREPGGVRISEKIRDLILDPNNEE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ VI PAL G I+LCDRF+DSS AYQG + + Sbjct: 62 MDVRTEALLYAAARRQHLIEVIMPALAAGHIVLCDRFVDSSLAYQGAGRRIGIESVAQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ LD+ D GL+R+Q A +D E + + H++ R +L + Sbjct: 122 EFATEGLQPDFTLYLDIDSDEGLRRIQ----TSRKAGIDRLETEGLEFHQRVRHAYLKLV 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 +P+R ++ + Q V I+ Sbjct: 178 EKEPERFSLIHANQDVQEVVNECYTIIK 205 >gi|161506952|ref|YP_001576906.1| thymidylate kinase [Lactobacillus helveticus DPC 4571] gi|172048179|sp|A8YTF9|KTHY_LACH4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|160347941|gb|ABX26615.1| Thymidylate kinase [Lactobacillus helveticus DPC 4571] gi|328462877|gb|EGF34726.1| thymidylate kinase [Lactobacillus helveticus MTCC 5463] Length = 212 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + + + + VTREPGG+ AE R ++L D+ Sbjct: 2 RGYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AAAR HVE +IRPAL EGKI+ DRF+DSS AYQGE + + Sbjct: 62 MDAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGEGRDLGIEEVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGL R+Q +E D E++++ H+K FL + Sbjct: 122 DFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLKVK 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PDR +D+ + V ++ + + + + Sbjct: 178 DLYPDRFVTIDATQPIEDVVNQVIATLEKRLPE 210 >gi|85859637|ref|YP_461839.1| thymidylate kinase [Syntrophus aciditrophicus SB] gi|123516788|sp|Q2LUB1|KTHY_SYNAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|85722728|gb|ABC77671.1| thymidylate kinase [Syntrophus aciditrophicus SB] Length = 219 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 122/216 (56%), Gaps = 1/216 (0%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FISFEGIEG GKTT + L ++L+ V T EPGGTP + R++LL+ G E AE Sbjct: 4 FISFEGIEGCGKTTQLKLAAQYLRTLKIPVGTTEEPGGTPLGKKIRNILLNRGPFEICAE 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++F AAR HV VI P+L G+ +LCDRF D++ YQG ++ L + Sbjct: 64 AETLLFVAARAQHVREVILPSLARGQWILCDRFSDATAVYQGCVRGIDEAWIRQLDSFAT 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P+ T++ DLP + GL R R + E++ D FE++ + HEK R+ +L +AR + Sbjct: 124 SFLKPNLTLLFDLPAETGLHRAMQRMTGIPENSREDRFEQEGLNFHEKIREGYLALARQE 183 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 +R I+++A S+ + + L Q+ + L Sbjct: 184 SERFRIINAAADIPSIHREVCRHLDVLRQQPEAGLP 219 >gi|163760148|ref|ZP_02167231.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43] gi|162282547|gb|EDQ32835.1| hypothetical protein HPDFL43_07799 [Hoeflea phototrophica DFL-43] Length = 226 Score = 257 bits (658), Expect = 8e-67, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 146/212 (68%), Gaps = 2/212 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+FEG EG GK+T I+ L + L+R+ DV VTREPGG+ AEA RHVLLS +E Sbjct: 4 SKGRFITFEGGEGVGKSTQINRLAKVLRRRGMDVLVTREPGGSLGAEAVRHVLLSGAAEE 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG EA++FAAAR DHVE VIRPAL EG I+LCDR++DSS YQG + + F+ +L+ Sbjct: 64 FGIRMEAMLFAAARSDHVEEVIRPALAEGAIVLCDRYMDSSRVYQGVTGNLEPQFIVNLE 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+V ++PD T+ILDLP + GL+R + R + D FE+++V HEKRR+ F+D+ Sbjct: 124 RIAVNSMVPDLTLILDLPAEAGLRRAKARVGA--NVAPDRFEKEEVATHEKRREAFIDLT 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R++P+RC ++++ VA +L+ V +++ Sbjct: 182 RSEPERCKLINADQPEDMVALAVLSTVEPVLE 213 >gi|116629043|ref|YP_814215.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323] gi|311111161|ref|ZP_07712558.1| dTMP kinase [Lactobacillus gasseri MV-22] gi|116094625|gb|ABJ59777.1| thymidylate kinase [Lactobacillus gasseri ATCC 33323] gi|311066315|gb|EFQ46655.1| dTMP kinase [Lactobacillus gasseri MV-22] Length = 217 Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ L + L ++ + +TREPGG+ +E R ++L E Sbjct: 6 RGYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKE 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG + + + Sbjct: 66 MDDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQGVGRNLGVEAVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL GL R++ + D E++ + H+K + D+ Sbjct: 126 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHQKVYAGYTDLL 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + PDR VD+ + VA N + I+ + + Sbjct: 182 KRYPDRIKKVDANLPIKEVAANSVKIIRKQL 212 >gi|56418559|ref|YP_145877.1| thymidylate kinase [Geobacillus kaustophilus HTA426] gi|261417524|ref|YP_003251206.1| thymidylate kinase [Geobacillus sp. Y412MC61] gi|297528399|ref|YP_003669674.1| thymidylate kinase [Geobacillus sp. C56-T3] gi|319765181|ref|YP_004130682.1| thymidylate kinase [Geobacillus sp. Y412MC52] gi|73920820|sp|Q5L3W9|KTHY_GEOKA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56378401|dbj|BAD74309.1| thymidylate kinase [Geobacillus kaustophilus HTA426] gi|261373981|gb|ACX76724.1| thymidylate kinase [Geobacillus sp. Y412MC61] gi|297251651|gb|ADI25097.1| thymidylate kinase [Geobacillus sp. C56-T3] gi|317110047|gb|ADU92539.1| thymidylate kinase [Geobacillus sp. Y412MC52] Length = 214 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 116/213 (54%), Gaps = 4/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F SFEG EGAGKTT IS L+ L+ + DV TREPGG AEA R ++L+ E Sbjct: 6 NGCFFSFEGPEGAGKTTMISKLESLLRERGIDVVATREPGGVRIAEAIRSIILNRDYTEM 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + + E Sbjct: 66 DGRTEALLYAAARRQHLLEKIVPALEAGCVVLCDRFVDSSLAYQGFARGLGIEEVWKINE 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ MP TI D+ IGL+R++ R RE ++ + + + HEK R+ + ++AR Sbjct: 126 FAIDGYMPSLTIYFDIDPQIGLERIR-RNRGRE---VNRLDLETLSFHEKVREGYRELAR 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 DR ++D+ V V ++ R Sbjct: 182 RFADRIVVIDANRPLDDVFAETTAAVLSRLKGR 214 >gi|115524871|ref|YP_781782.1| thymidylate kinase [Rhodopseudomonas palustris BisA53] gi|115518818|gb|ABJ06802.1| thymidylate kinase [Rhodopseudomonas palustris BisA53] Length = 229 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG EGAGK+T I LL + L+R +TREPGG+P AE RH+LLS Sbjct: 11 RGRFISFEGGEGAGKSTQIKLLAQRLERAGLRTKITREPGGSPGAEIIRHLLLSGIGSLI 70 Query: 63 G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G A AE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG + L++L+ Sbjct: 71 GGASAETVLFAAARDDHVHTVIAPALAQGTWVLCDRFSDSTRAYQGRLGAVPPALLNALE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ + PD T+ILD+PV+ G++R R R A D FE + + H R+ + IA Sbjct: 131 RVTIDGLKPDLTLILDVPVETGVRRAAVR---RGDATPDRFEAEGLEFHRGLREAYRQIA 187 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P RC ++D+ + ++VA + N V + + Sbjct: 188 ADNPQRCVLIDADAALETVAERVWNAVRQRL 218 >gi|225871114|ref|YP_002747061.1| thymidylate kinase [Streptococcus equi subsp. equi 4047] gi|254808305|sp|C0M7M5|KTHY_STRE4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225700518|emb|CAW94978.1| thymidylate kinase [Streptococcus equi subsp. equi 4047] Length = 211 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 105/209 (50%), Gaps = 5/209 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+FEG +GAGKTT + L LQ + TREPGG AE R ++L Sbjct: 1 MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I PAL G ++L DRF+DSS AYQG + Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPALESGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + V PD T+ D+P ++GL R+ ++ + + + +H++ R+ +L+ Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE----REINRLDLEQLDLHQRVRKGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A P R +D++ +SV + L + Sbjct: 177 LALENPQRIVKIDASQDLESVVSAALAAI 205 >gi|254386206|ref|ZP_05001517.1| thymidylate kinase [Streptomyces sp. Mg1] gi|194345062|gb|EDX26028.1| thymidylate kinase [Streptomyces sp. Mg1] Length = 852 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 114/210 (54%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 516 AGFFIALEGGDGAGKSTQVQALADWIRGKGHEVVVTREPGATPVGKRLRSILLDVSSAGL 575 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + Sbjct: 576 SNRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPTEIARISR 635 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LD+ + +R + D E + H++ R FL +A Sbjct: 636 WATGGLVPNLTVLLDVSPEAARERF--------TEAPDRLESEPAEFHQRVRAGFLTLAA 687 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ +SV+T + + + ++ Sbjct: 688 ADPGRYLVVDAGQDPESVSTVVRHRLDRML 717 >gi|291446581|ref|ZP_06585971.1| integral membrane protein with kinase activity [Streptomyces roseosporus NRRL 15998] gi|291349528|gb|EFE76432.1| integral membrane protein with kinase activity [Streptomyces roseosporus NRRL 15998] Length = 1070 Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 497 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 556 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 557 SNRAEVLLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 616 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +R + D E + HE+ R FL +A Sbjct: 617 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAEFHERVRSGFLTLAA 668 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ +S+ T + + + +L+ Sbjct: 669 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 698 >gi|49474220|ref|YP_032262.1| thymidylate kinase [Bartonella quintana str. Toulouse] gi|59798258|sp|Q6FZU8|KTHY_BARQU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49239724|emb|CAF26103.1| Thymidylate kinase [Bartonella quintana str. Toulouse] Length = 214 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 92/214 (42%), Positives = 139/214 (64%), Gaps = 2/214 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG GKTT ISLL ++L+ + YDV TREPGGT AEA RH+LLS + Sbjct: 2 SGYFITFEGGEGVGKTTQISLLAQYLRNQGYDVLTTREPGGTVGAEAIRHILLSGQAQNY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E I+ AAR+DH+ VI P+L +GKI+LCDRF+DS+ YQG ++ L L+ Sbjct: 62 GPLIEVILLTAARIDHITEVIAPSLQKGKIVLCDRFIDSTRVYQGLNNTVGSSVLSVLEY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ +MP T +LD+P G++R R +++ +DYFE+ ++ I E+RRQ FL +A+ Sbjct: 122 VALNGIMPCLTFLLDIPARCGMERANLR--RKKAETIDYFEKDELKIQEQRRQAFLQLAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +P R ++D+ + + +A I NI +++ +V Sbjct: 180 QEPHRFRVIDATGAMEVIAQQIKNICHQVILDQV 213 >gi|260102441|ref|ZP_05752678.1| dTMP kinase [Lactobacillus helveticus DSM 20075] gi|260083761|gb|EEW67881.1| dTMP kinase [Lactobacillus helveticus DSM 20075] Length = 216 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + + + + VTREPGG+ AE R ++L D+ Sbjct: 6 RGYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AAAR HVE +IRPAL EGKI+ DRF+DSS AYQGE + + Sbjct: 66 MDAKTEALLYAAARSQHVEEIIRPALSEGKIVFSDRFVDSSLAYQGEGRDLGIEEVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGL R+Q +E D E++++ H+K FL + Sbjct: 126 DFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLKVK 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PDR +D+ + V ++ + + + + Sbjct: 182 DLYPDRFVTIDATQPIEDVVNQVIATLEKRLPE 214 >gi|167768112|ref|ZP_02440165.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1] gi|317499447|ref|ZP_07957714.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA] gi|167709636|gb|EDS20215.1| hypothetical protein CLOSS21_02667 [Clostridium sp. SS2/1] gi|291559963|emb|CBL38763.1| thymidylate kinase [butyrate-producing bacterium SSC/2] gi|316893319|gb|EFV15534.1| thymidylate kinase [Lachnospiraceae bacterium 5_1_63FAA] Length = 208 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 124/207 (59%), Gaps = 6/207 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG +GAGKTT I LL+ +L K YD+ V REPGGTP +EA R+V+L+ E G Sbjct: 2 GLFLTVEGPDGAGKTTQIELLRDYLSDKGYDIIVCREPGGTPISEAVRNVILNKEFTEMG 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR +E VIRPAL +GKI++CDRF++SS YQG + + + Sbjct: 62 HMTELLLYAAARAQLIEEVIRPALEDGKIVICDRFVESSAVYQGIARGMGIDLVYKVNQF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + MPD TI++DL + G+ R + A LD E + + H+K + + +A Sbjct: 122 AIGDTMPDLTIMIDLDAEAGISRKKK------QAELDRMESETIDFHKKVVEGYRQLASL 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 PDR + VD + + + + I++ V + Sbjct: 176 HPDRIYTVDGSLTIEEIHQKIVSQVNK 202 >gi|218781657|ref|YP_002432975.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01] gi|218763041|gb|ACL05507.1| dTMP kinase [Desulfatibacillum alkenivorans AK-01] Length = 220 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 119/217 (54%), Gaps = 2/217 (0%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ G+FI+ EGIEGAGKTT + + F++ + Y+ TREPGGT R +LL+ Sbjct: 1 MSRPGVFITLEGIEGAGKTTQVGRILEFMESQGYECISTREPGGTGIGAKIRAILLNSEH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 AE +++ A R H+ +I+PAL GK ++CDRF D++ AYQG F++ Sbjct: 61 VTLAPLAELLLYEADRAQHLARLIKPALEAGKCVVCDRFCDATTAYQGYARELSLDFINE 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFL 178 L + + PD T++ DLP +IGL R + R + + + FE +D+ H K RQ +L Sbjct: 121 LHARILDGLTPDLTLLFDLPAEIGLSRAKTRLHEQNNTSQEGRFEAEDLAFHRKVRQGYL 180 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A+ +P R IV++ + V ++ E KR Sbjct: 181 TLAKAEPGRFAIVNADAAPDRVWEETKELLAEFTAKR 217 >gi|293365189|ref|ZP_06611906.1| thymidylate kinase [Streptococcus oralis ATCC 35037] gi|307703727|ref|ZP_07640668.1| thymidylate kinase [Streptococcus oralis ATCC 35037] gi|291316639|gb|EFE57075.1| thymidylate kinase [Streptococcus oralis ATCC 35037] gi|307622562|gb|EFO01558.1| thymidylate kinase [Streptococcus oralis ATCC 35037] Length = 212 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVSIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFDRM 208 >gi|318076468|ref|ZP_07983800.1| thymidylate kinase [Streptomyces sp. SA3_actF] Length = 896 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 223 TTGFFLALEGGDGAGKSTQAEALAEWIRAKGHEVVLTREPGATPVGKRLRSILLDVSSAG 282 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G I++ DR++DSS AYQG + + + Sbjct: 283 LSHRAEALLYAADRAEHVDTVVRPALERGAIVITDRYIDSSVAYQGAGRDLSPVEIARIS 342 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LD+ + +R + D E + H + R FL +A Sbjct: 343 RWATGGLVPNLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRAGFLTLA 394 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +VD A +SV + + + +L+ Sbjct: 395 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 425 >gi|254464514|ref|ZP_05077925.1| thymidylate kinase [Rhodobacterales bacterium Y4I] gi|206685422|gb|EDZ45904.1| thymidylate kinase [Rhodobacterales bacterium Y4I] Length = 215 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+FEGI+G+GK+T LL L+ DV +TREPGG+P AE R ++L D Sbjct: 6 TRGLFITFEGIDGSGKSTQCRLLAEALRAAGRDVVLTREPGGSPGAEEIRRLVLEGDPDR 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D + Sbjct: 66 WSAETELLLFMAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRAAVDQMH 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+++D+ GL R + R E FE V + EK R FL +A Sbjct: 126 RLMIGR-EPDLTLLIDMDPAEGLARAKGRQGKEE-----RFEDFGVELQEKMRAGFLALA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + DR +VD A + VA ++ + + ++ Sbjct: 180 QEFADRFRVVDGARPVEEVAADVRRLAEDALE 211 >gi|282852748|ref|ZP_06262090.1| dTMP kinase [Lactobacillus gasseri 224-1] gi|282556490|gb|EFB62110.1| dTMP kinase [Lactobacillus gasseri 224-1] Length = 213 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ L + L ++ + +TREPGG+ +E R ++L E Sbjct: 2 RGYLITFEGPDGAGKTTVINELIKQLPKEIQEKTIITREPGGSKISENIRTIILDPANKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GKI+L DRF+DSS AYQG + + + Sbjct: 62 MDDRTEALLYAAQRSQHVSEVIRPALEAGKIVLSDRFIDSSLAYQGVGRNLGVEAVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL GL R++ + D E++ + H+K + D+ Sbjct: 122 DFGTGGLEPDLTIFLDLDPATGLARIEK----ERAGQEDRLEQEKLAFHQKVYAGYTDLL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + PDR VD+ + VA N + I+ + + Sbjct: 178 KRYPDRIKKVDANLPIKEVAANSVKIIRKQL 208 >gi|327182908|gb|AEA31355.1| thymidylate kinase [Lactobacillus amylovorus GRL 1118] Length = 212 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 117/213 (54%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F+SFEG +GAGK+T + +L + + VTREPGG+ AE R ++L D+ Sbjct: 2 TGYFVSFEGPDGAGKSTVLKEVLAKIGSQLKPQYLVTREPGGSKIAEKIRDIILDPANDK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AAAR HVE +I+PAL GKI+ DRF+DSS AYQGE + + Sbjct: 62 MDAKTEALLYAAARSQHVEEIIKPALTAGKIVFSDRFVDSSLAYQGEGRDLGIKEVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T +D+ +IGL R+Q +E D E++++ H K Q FL + Sbjct: 122 DFATNKLDPDLTFFIDVAPEIGLSRIQKLRPGQE----DRLEQENLSFHTKVYQGFLKVR 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R +D V ++ + + + + Sbjct: 178 AMYPERFVTIDGTQPIDQVVDQVIATLKQRMPE 210 >gi|82702516|ref|YP_412082.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196] gi|123544544|sp|Q2Y981|KTHY_NITMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|82410581|gb|ABB74690.1| thymidylate kinase [Nitrosospira multiformis ATCC 25196] Length = 205 Score = 257 bits (657), Expect = 1e-66, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 115/206 (55%), Gaps = 7/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EGI+GAGKTTH+ L+ FL+ + +V VTREPGGTP EA R +LL Sbjct: 2 RGKFITLEGIDGAGKTTHLRWLEYFLKERGKNVMVTREPGGTPLGEALRDILLDSRQT-M 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA++ AAR +H++ VI PAL G+ ++ DRF D+S+AYQG L+ L+ Sbjct: 61 HAETEALLMFAARREHLDKVILPALSRGEWVISDRFTDASFAYQGGGRGLSLQKLNELEC 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E PD T+ LD+ + G +R N D FE++ + R+ +L+ A+ Sbjct: 121 WVQGEFQPDVTLYLDVSIASGRQRTSN------IRQADRFEKEQDEFFRRVREAYLERAK 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++D+ S + V ++ + Sbjct: 175 EFPERIRVIDANQSLEDVRRSVEKSI 200 >gi|269468275|gb|EEZ79959.1| thymidylate kinase [uncultured SUP05 cluster bacterium] Length = 205 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ +G+EGAGK+T I+ + +L+ K +V +TREPGGT E R +LLS Sbjct: 1 MQKGKFITIDGVEGAGKSTQINFICGYLKDKGINVALTREPGGTELGEKIRTLLLSPKTK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E ++ AAR +H+ I P L +G +L DRF D+SYAYQG + L Sbjct: 61 SMHSDTELLLMFAARNEHIHAKIMPILEKGDWVLSDRFTDASYAYQGGGRGLDVDRIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E +Q+ PD T++LD+PV++G+ RV++R D E +D+ + R ++ Sbjct: 121 EEWVLQDFTPDMTLLLDVPVELGMSRVESR------GEKDRIELEDMDFFNRVRDAYISR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ PDR ++DS+ + + I I+ L Sbjct: 175 SKQFPDRIKLIDSSETVEHTKEQIKIILDSL 205 >gi|291482399|dbj|BAI83474.1| thymidylate kinase [Bacillus subtilis subsp. natto BEST195] Length = 212 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG + S+ E Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++MP T+ + + GLKR+ S + + + + + H K ++ + ++ + Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H VD+ S V ++L ++ E ++K Sbjct: 178 RFPERFHSVDAGQSKGLVVQDVLKVIDEALKK 209 >gi|90415870|ref|ZP_01223803.1| thymidylate kinase [marine gamma proteobacterium HTCC2207] gi|90332244|gb|EAS47441.1| thymidylate kinase [marine gamma proteobacterium HTCC2207] Length = 208 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG EG GKTT+I ++ ++ K TREPGGTP AE R +LL+ + Sbjct: 2 RGKFITIEGTEGVGKTTNIKFIQDWMDSKKLTYGCTREPGGTPLAEQVRELLLAPREESV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR H+ VI P L EG +LCDRF D++YAYQG + + L+ Sbjct: 62 CNTAELLMVFAARAQHLNQVIEPMLGEGAWVLCDRFTDATYAYQGAGRHMRDDLIRDLEL 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ILD+PV IGL R R + D FE++ V E+ R +L IA+ Sbjct: 122 MVQGSLQPDLTLILDIPVQIGLARASER------STPDRFEQEQVAFFERVRNRYLQIAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P RC ++D++ + + V I + + Sbjct: 176 DNPQRCVVIDASLTLEGVQAQITQTLETFWE 206 >gi|182437093|ref|YP_001824812.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326777708|ref|ZP_08236973.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1] gi|178465609|dbj|BAG20129.1| putative thymidylate kinase [Streptomyces griseus subsp. griseus NBRC 13350] gi|326658041|gb|EGE42887.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1] Length = 1084 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 506 TGFFLALEGGDGAGKSTQVEALADWIRSKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +R + D E + HE+ R FL +A Sbjct: 626 WATSGLVPHLTVLLDVDPATARERF--------TEAPDRLESEPAAFHERVRSGFLTLAA 677 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ +S+ T + + + +L+ Sbjct: 678 ADPTRYLVVDAGQEPESITTVVRHRLDQLL 707 >gi|295402004|ref|ZP_06811966.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93] gi|294976006|gb|EFG51622.1| thymidylate kinase [Geobacillus thermoglucosidasius C56-YS93] Length = 210 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 4/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F SFEG EGAGKTT I++L+ FL+ K +DV TREPGG AE R ++L+ E Sbjct: 2 KGRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PA+ GKI+LCDRF+DSS AYQG + + + Sbjct: 62 DGRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQGFARELGMDEILQINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ P TI D+ IGL+R+Q + ++ + +++ H K R+ +L +A+ Sbjct: 122 FAIDGYFPTLTIYFDIDPKIGLERIQKN----KQREMNRLDMENLSFHYKVREGYLKLAK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 DR +D++ S V + + + + +R Sbjct: 178 RFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210 >gi|323465901|gb|ADX69588.1| Thymidylate kinase [Lactobacillus helveticus H10] Length = 216 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 118/213 (55%), Gaps = 5/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +GAGK+T + + + + VTREPGG+ AE R ++L D+ Sbjct: 6 RGYFVSFEGPDGAGKSTVLKEVLDQIGPKLKPQYLVTREPGGSKIAEKIRDIILDPANDK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AAAR HVE +IRPAL +GKI+ DRF+DSS AYQGE + + Sbjct: 66 MDAKTEALLYAAARSQHVEEIIRPALSDGKIVFSDRFVDSSLAYQGEGRDLGIEEVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++ PD T LD+ +IGL R+Q +E D E++++ H+K FL + Sbjct: 126 DFATGKLDPDLTFFLDIAPEIGLSRIQKLRPGQE----DRLEQENIAFHKKVYNGFLKVK 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PDR +D+ + V ++ + + + + Sbjct: 182 DLYPDRFVTIDATQPIEDVVNQVIATLEKRLPE 214 >gi|282901980|ref|ZP_06309878.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505] gi|281193067|gb|EFA68066.1| Thymidylate kinase [Cylindrospermopsis raciborskii CS-505] Length = 216 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62 G I FEG+EG+GKTT + +L ++LQ +TREPGGT + R +LL ++ Sbjct: 3 GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTHLGQNLRKLLLETFYEQPL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++ A R HV ++I+P L GK +LCDR+ +S+ AYQG + +D L + Sbjct: 63 DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTVAYQGYGRGLNMIIIDQLNQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + D TI LD+ V+IGL R R A LD E++ + H + ++ + IA+ Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQEGYNKIAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N P + VD + V NI I+ Sbjct: 177 NHPSKIIRVDGNREPELVQENIRKIL 202 >gi|295425167|ref|ZP_06817871.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664] gi|295065143|gb|EFG56047.1| thymidylate kinase [Lactobacillus amylolyticus DSM 11664] Length = 216 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FIS EG +GAGK++ + +L + N VTREPGG+ AE R ++L + Sbjct: 6 KGYFISLEGPDGAGKSSVLEQVLNEIGPQLNTQYLVTREPGGSRIAEKIRQIILDPANVK 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR HVE ++RPAL GK++ DRF+DSS AYQG + + Sbjct: 66 MDDRTEALLYAAARSQHVEEIVRPALAAGKVVFSDRFVDSSLAYQGAGRDLGIDQVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ DL IGL R+Q +E D E++ + HEK + IA Sbjct: 126 EFATGGIEPDLTLFFDLDPKIGLARIQKLRPDQE----DRLEQEKLAFHEKVYAGYQKIA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R PDR +D++ F V + I+ + + Sbjct: 182 RQNPDRIVKIDASQPFDQVEAETIAIIKKRL 212 >gi|83593038|ref|YP_426790.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170] gi|83575952|gb|ABC22503.1| thymidylate kinase [Rhodospirillum rubrum ATCC 11170] Length = 214 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 82/223 (36%), Positives = 119/223 (53%), Gaps = 9/223 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT +S L + L +V TREPGG+P AEA R +L++ G + Sbjct: 1 MTGGRFITLEGGEGAGKTTQLSRLAQALAPLVPEVVTTREPGGSPGAEAIRGLLVAGGAE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AAAR DH+ + PAL G ++CDRF DS+ AYQG LD+L Sbjct: 61 RWDPRGEALLHAAARRDHLLRTVWPALARGAWVVCDRFADSTSAYQGGGHGLPQDELDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 PD T+I DLPV +GL R R D +ER D H++ + I Sbjct: 121 HAFVCGGFQPDLTVIFDLPVAVGLARAGRR-----GGGEDRYERMDPAFHQRLFDRYHAI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 A P+RC ++++ + ++V + +V E R L+ ++ Sbjct: 176 ASAFPERCRLIEADGAIEAVHARLWAVVLE----RFPELTERR 214 >gi|258513464|ref|YP_003189686.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771] gi|257777169|gb|ACV61063.1| thymidylate kinase [Desulfotomaculum acetoxidans DSM 771] Length = 233 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 18/228 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAARHV 53 G+FI FEGI+G+GKTT I++L + L + N V +TREPGGT +E R++ Sbjct: 2 RGVFIVFEGIDGSGKTTQINILYKNLLQHNRIKNQPAGSEYVLLTREPGGTATSELIRNI 61 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 LL+ D+ A EA+++AAAR HVE IRPAL GKI++CDRF+DSS AYQG Sbjct: 62 LLNPANDKLCARTEALLYAAARAQHVEERIRPALSSGKIVICDRFIDSSLAYQGYGRGQD 121 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 FL +L +++ + PD TI+LDLPV LKR+ NR D E + V +E+ Sbjct: 122 LSFLHNLNQLAAGGLKPDLTILLDLPVGAALKRLNNRQVS--GIEKDRLESEAVSFYERV 179 Query: 174 RQIFLDIARNQPDR-------CHIVDSAHSFQSVATNILNIVWELVQK 214 R+ +L IA D +V++ V+ I++ V + K Sbjct: 180 REGYLKIAGTGIDNNSAGSGGYLVVNADQELNKVSDRIIDGVGNCLPK 227 >gi|152985503|ref|YP_001347571.1| thymidylate kinase [Pseudomonas aeruginosa PA7] gi|166223103|sp|A6V3D6|KTHY_PSEA7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150960661|gb|ABR82686.1| thymidylate kinase [Pseudomonas aeruginosa PA7] Length = 210 Score = 256 bits (656), Expect = 1e-66, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 119/212 (56%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EGAGK+T+ L L+ + +V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFVTLEGPEGAGKSTNRDYLAERLRERGVEVQLTREPGGTPLAERIRELLLAPSDEPM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF D++YAYQG + +L+ Sbjct: 62 AADTELLLMFAARAQHIAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALES 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++D E RQ +L A Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLARAAAR------GRLDRFEQEDRRFFEAVRQTYLQRAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+ V + ++ L+++ Sbjct: 176 QAPQRYQVLDAGLPLAEVQAGLDRLLPNLLER 207 >gi|289577348|ref|YP_003475975.1| thymidylate kinase [Thermoanaerobacter italicus Ab9] gi|289527061|gb|ADD01413.1| thymidylate kinase [Thermoanaerobacter italicus Ab9] Length = 204 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I LK +L +K Y++ V REPGGT E R +LL + Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLKEYLLKKGYNILVLREPGGTNVGEKVRDILLD-KYNFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PA+ EGKI+L DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKIVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R D ER+ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLERESWDFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++ V +I++ V + + Sbjct: 174 EYPKRFVFINGMQEIVKVHQDIIDAVKKYL 203 >gi|295837412|ref|ZP_06824345.1| dTMP kinase [Streptomyces sp. SPB74] gi|295826517|gb|EDY43005.2| dTMP kinase [Streptomyces sp. SPB74] Length = 1172 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F++ EG +GAGK+T L +++ K ++V +TREPG TP + R +LL Sbjct: 492 TNGFFLALEGGDGAGKSTQAEALAEWIRGKGHEVVLTREPGATPVGKRLRSILLDVSSAG 551 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R +HV+ V+RPAL G +++ DR++DSS AYQG + + + Sbjct: 552 LSHRAEALLYAADRAEHVDTVVRPALERGAVVITDRYIDSSVAYQGAGRDLSPVEIARIS 611 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 612 RWATGGLVPHLTVLLDVAPEAARERF--------TEAPDRLESEPAEFHARVRTGFLTLA 663 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +VD A +SV + + + +L+ Sbjct: 664 AAAPERYLVVDGAQEPESVTRTVRHRLDQLL 694 >gi|92113730|ref|YP_573658.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043] gi|122420045|sp|Q1QX49|KTHY_CHRSD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91796820|gb|ABE58959.1| thymidylate kinase [Chromohalobacter salexigens DSM 3043] Length = 212 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 M G FI+ EG EG GK+T+++ + +L + +V TREPGGTP AEA R +LL Sbjct: 1 MTPGRFITLEGGEGVGKSTNVAFVCDWLSARGIEVVRTREPGGTPRAEAIRELLLDPAPQ 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AE ++ AAR H+ IRPAL G ++CDRF D+++AYQG + + Sbjct: 61 EPLDETAELLLMFAARAQHLAARIRPALARGAWVVCDRFTDATFAYQGGGRGLDETRIAT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ + Q + PD T++LD+PV+ +RV+ R R D FER+ R+ +L Sbjct: 121 LEALVQQGLQPDLTLLLDMPVEAAQRRVERRGIER-----DRFERERGAFFNAVRESYLA 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P R ++D+ S ++V +I + E + Sbjct: 176 RAAQAPTRFAVIDADRSLEAVQASIAAHLTERL 208 >gi|330718537|ref|ZP_08313137.1| thymidylate kinase [Leuconostoc fallax KCTC 3537] Length = 217 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 119/216 (55%), Gaps = 5/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ FISFEG EGAGKT+ + L L D+ TREPGG P AEA R +L Sbjct: 1 MSEAKFISFEGPEGAGKTSVLQALIGELGPMLGDDLVTTREPGGNPIAEAIRAILQPEED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++AAAR H+ I+PAL GK+++ DR++DSS AYQG + + Sbjct: 61 NGMDKRTEALLYAAARRQHLVETIQPALAAGKVVISDRYIDSSLAYQGGGRDLGVDRIWT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + + ++PD TI LD+P DIGLKRV +D +++D+ H K R +L Sbjct: 121 LNQFATEGLLPDLTIYLDVPADIGLKRVMQ----HRQGKIDRLDKEDLSFHIKVRNTYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + PDR ++D+ + V T ++W+ ++ R Sbjct: 177 LRDQFPDRIQVIDATQPLEMVITATRALIWQQLKNR 212 >gi|307265699|ref|ZP_07547252.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1] gi|306919343|gb|EFN49564.1| thymidylate kinase [Thermoanaerobacter wiegelii Rt8.B1] Length = 203 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I L+ +L ++ Y++ V REPGGT E R +LL + Sbjct: 2 RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PAL +G+I++ DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R D E++ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLEKESWEFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +D V +I+++V + + Sbjct: 174 EFPKRFVFIDGMQELMKVHQDIIDVVKKYL 203 >gi|23336149|ref|ZP_00121376.1| COG0125: Thymidylate kinase [Bifidobacterium longum DJO10A] gi|189440137|ref|YP_001955218.1| thymidylate kinase [Bifidobacterium longum DJO10A] gi|238692075|sp|B3DUA1|KTHY_BIFLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189428572|gb|ACD98720.1| Thymidylate kinase [Bifidobacterium longum DJO10A] Length = 206 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL G Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ + S Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++PD T +LD+ + R+++ D E + RQ FLD Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHNRLEH--------AEDRMESAGSDFQSRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +A +P+R ++D++ S ++V I + + EL Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205 >gi|262368570|ref|ZP_06061899.1| thymidylate kinase [Acinetobacter johnsonii SH046] gi|262316248|gb|EEY97286.1| thymidylate kinase [Acinetobacter johnsonii SH046] Length = 199 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 78/205 (38%), Positives = 109/205 (53%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + L+++ V +TREPGGTP AE R +LLS +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIYEHLEQQGQQVVLTREPGGTPMAEQIRSLLLSVNHEESMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL + K +LCDRF D+S+AYQ L L E Sbjct: 61 NDTELLLMYAARAQHLQQVIVPALTKHKTVLCDRFTDASFAYQCAGRGLSQSKLQLLNE- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MPD T LD P++ G+ R + R LD FE++ V EK R + + Sbjct: 120 NFVSHMPDITFWLDAPIETGMSRARER------GALDRFEQEKVTFFEKVRAGYQQLWEQ 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 P+R +D+ S + V L + Sbjct: 174 YPERVKRLDATQSPEQVFAQALQYL 198 >gi|148992933|ref|ZP_01822552.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68] gi|168483004|ref|ZP_02707956.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00] gi|168490250|ref|ZP_02714449.1| thymidylate kinase [Streptococcus pneumoniae SP195] gi|147928385|gb|EDK79401.1| thymidylate kinase [Streptococcus pneumoniae SP9-BS68] gi|172043528|gb|EDT51574.1| thymidylate kinase [Streptococcus pneumoniae CDC1873-00] gi|183571397|gb|EDT91925.1| thymidylate kinase [Streptococcus pneumoniae SP195] gi|332073266|gb|EGI83745.1| thymidylate kinase [Streptococcus pneumoniae GA17570] Length = 212 Score = 256 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|167038531|ref|YP_001666109.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167038727|ref|YP_001661712.1| dTMP kinase [Thermoanaerobacter sp. X514] gi|256751401|ref|ZP_05492280.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300913688|ref|ZP_07131005.1| thymidylate kinase [Thermoanaerobacter sp. X561] gi|307723297|ref|YP_003903048.1| thymidylate kinase [Thermoanaerobacter sp. X513] gi|320116927|ref|YP_004187086.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687559|sp|B0K119|KTHY_THEPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687643|sp|B0K7K7|KTHY_THEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166852967|gb|ABY91376.1| dTMP kinase [Thermoanaerobacter sp. X514] gi|166857365|gb|ABY95773.1| dTMP kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256749783|gb|EEU62808.1| thymidylate kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300890373|gb|EFK85518.1| thymidylate kinase [Thermoanaerobacter sp. X561] gi|307580358|gb|ADN53757.1| thymidylate kinase [Thermoanaerobacter sp. X513] gi|319930018|gb|ADV80703.1| thymidylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 203 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I L+ +L ++ Y++ V REPGGT E R +LL + Sbjct: 2 KGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PA+ EGKI+L DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPAIEEGKIVLLDRFVDSSYVYQGYARGLGIEKVKVVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R D ER+ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLERESWDFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +D V +I+++V + + Sbjct: 174 EFPKRFVFIDGMQELMKVHKDIIDVVKKYL 203 >gi|306825448|ref|ZP_07458788.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432386|gb|EFM35362.1| thymidylate kinase [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 212 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRIVKIDASLPLEEVVEATKAVLFDRM 208 >gi|322376438|ref|ZP_08050931.1| dTMP kinase [Streptococcus sp. M334] gi|321282245|gb|EFX59252.1| dTMP kinase [Streptococcus sp. M334] Length = 212 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 111/212 (52%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ + ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETAKAVLFDRM 208 >gi|297172305|gb|ADI23282.1| thymidylate kinase [uncultured actinobacterium HF0770_13M05] Length = 208 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 8/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG+EG GKTT+I L+ L++K DV VTREPGGTP AE R VLL + Sbjct: 1 MTRGRFITLEGVEGVGKTTNIGFLREILEQKGIDVLVTREPGGTPLAEEVREVLLQMRDE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++ AAR HV VI PAL +G+ +LCDR+ D++YAYQG L+ L Sbjct: 61 SMDPITEALLIFAARSQHVSAVIEPALNDGRWVLCDRYTDATYAYQGGGRGVPLDTLERL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD TI LD PV+I L R+ +R D FE +D + R +L I Sbjct: 121 AEFAQGSLWPDLTIFLDAPVNIALGRIADRQH-------DRFESEDSEFFARVRAGYLAI 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +R ++D+ S + V + + ++ ++ Sbjct: 174 VERE-ERAVLIDATRSLEDVQSRLAELINNFLE 205 >gi|283768611|ref|ZP_06341523.1| dTMP kinase [Bulleidia extructa W1219] gi|283105003|gb|EFC06375.1| dTMP kinase [Bulleidia extructa W1219] Length = 225 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI+ EG +G+GK+T + + LQ++ Y + +TREPGG+ AE R ++L Sbjct: 16 MKKALFITIEGPDGSGKSTVSQTVCQRLQQEGYRLQLTREPGGSKIAEQIRSIILDPQNT 75 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A EA+++AA+R H+ + + PAL G ++ DRF+DSS AYQG + + Sbjct: 76 DMDARTEALLYAASRRQHLMDKVLPALENGIPVISDRFVDSSLAYQGVGRCIGIEPVWLI 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ +PD TI LD+ + GL+R+Q LD ++++ H + Q + I Sbjct: 136 NEFAIEGCLPDKTIYLDIDAETGLRRIQK-----GRNQLDRLDQEEASFHTRVFQGYQTI 190 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + PDR VD+ + V + ++ L+ + Sbjct: 191 LKRFPDRFIKVDARQGLEKVVEDTYVVLKGLLDAQ 225 >gi|225181529|ref|ZP_03734971.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1] gi|225167777|gb|EEG76586.1| dTMP kinase [Dethiobacter alkaliphilus AHT 1] Length = 209 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 109/214 (50%), Gaps = 7/214 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG +GAGKTT ++ L ++ V TREPGGTP +A R +LL Sbjct: 1 MKKGFFITLEGPDGAGKTTQLTRLADAARQMGIQVVCTREPGGTPVGDAVRRILLDTAYS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++AAAR VI PAL +G+++LCDRF+DS+ AYQ F+ Sbjct: 61 EMVPLTEVFLYAAARAQLFHQVIGPALKQGQLVLCDRFIDSTLAYQSYGGEMDFSFVLET 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V +PD T +LD+ +G++R R S D E+K + H + R FL + Sbjct: 121 NLQAVSHRLPDLTFVLDIDPSVGVER-------RGSGTADRVEQKALSFHHRVRDGFLSL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A P+R +V S V I N V L++K Sbjct: 174 ADKFPERIKVVKGTQSEDEVFAVIWNQVAPLLEK 207 >gi|294787169|ref|ZP_06752422.1| dTMP kinase [Parascardovia denticolens F0305] gi|315227293|ref|ZP_07869080.1| thymidylate kinase [Parascardovia denticolens DSM 10105] gi|294484525|gb|EFG32160.1| dTMP kinase [Parascardovia denticolens F0305] gi|315119743|gb|EFT82876.1| thymidylate kinase [Parascardovia denticolens DSM 10105] Length = 226 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 110/218 (50%), Gaps = 10/218 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FISFEG++G GK+T + L+ +L + V VTREPGGTP E R +LL + Sbjct: 3 GFFISFEGVDGVGKSTQVKRLEAYLLEQGRSVLVTREPGGTPLGERIRQILLHGEDEA-- 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AA+R HV IRPAL G +++ DR++DSS AYQ + L Sbjct: 61 PRTEALLYAASRAQHVAQKIRPALDSGALVISDRYIDSSLAYQAGGRELTLADVRRLNSW 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ PD T +LD+ +R+Q D E ++ RQ FL +A Sbjct: 121 ATGDLWPDRTYLLDMSFQQSRQRLQ--------GEPDRLESSGGAFFDRARQAFLALAEG 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 +PDR ++D++ V I L+ SPL+S Sbjct: 173 EPDRFRVIDASQPIDQVWQAIKTDADGLLAGLPSPLAS 210 >gi|311744559|ref|ZP_07718359.1| thymidylate kinase [Aeromicrobium marinum DSM 15272] gi|311312178|gb|EFQ82095.1| thymidylate kinase [Aeromicrobium marinum DSM 15272] Length = 217 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+F++ EG EG GK+T LL +L + + V VTREPGGTP R ++L Sbjct: 7 SGVFVALEGGEGGGKSTQSGLLASWLTERGHQVLVTREPGGTPVGSQLRRIVLDPATGAL 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AA + +HVE ++ PAL G+++L DR++DS+ AYQG + L+ + Sbjct: 67 NSRTEALIYAADKAEHVEALVLPALAAGQVVLTDRYVDSTLAYQGAGRAIDVQELEHVAR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ P T++LD+ +GL R D E + + H + R+ FL +A Sbjct: 127 WATADLRPHLTVVLDIDPVVGLARA---------GEPDRIEAEPLAFHRRVREHFLRLAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PD +VD+ + V +I + + + Sbjct: 178 ADPDHYLVVDADRPAEQVQADIRGALTPWLSR 209 >gi|320334977|ref|YP_004171688.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211] gi|319756266|gb|ADV68023.1| Thymidylate kinase [Deinococcus maricopensis DSM 21211] Length = 209 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 112/215 (52%), Gaps = 7/215 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++GLFI+FEG EGAGK+T + L L +TREPGGTP R VLL Sbjct: 1 MSAGLFITFEGPEGAGKSTQVRALTAHLAALGVPHTLTREPGGTPFGTRVRDVLLDP-TL 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++++A+R V +VIRPAL G++++CDR+ DSS AYQG L + Sbjct: 60 QIDPLPEFLLYSASRAQLVTDVIRPALARGEVVICDRYFDSSLAYQGGGRGLSSELLRRI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + P T +LDL +GL RV R D ER D+ H + R FLD+ Sbjct: 120 THEATGGLTPHLTFLLDLDPSVGLGRVAAR------GQPDRLERADLDFHTRVRARFLDL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A +P R ++D+ ++++ +I V + R Sbjct: 174 AAAEPARFEVLDATRPQEALSAHITARVDARLPAR 208 >gi|55820572|ref|YP_139014.1| thymidylate kinase [Streptococcus thermophilus LMG 18311] gi|55822462|ref|YP_140903.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066] gi|116627381|ref|YP_820000.1| thymidylate kinase [Streptococcus thermophilus LMD-9] gi|81559719|sp|Q5M0Z9|KTHY_STRT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|81560889|sp|Q5M5I6|KTHY_STRT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122268018|sp|Q03LW8|KTHY_STRTD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|55736557|gb|AAV60199.1| thymidylate kinase [Streptococcus thermophilus LMG 18311] gi|55738447|gb|AAV62088.1| thymidylate kinase [Streptococcus thermophilus CNRZ1066] gi|116100658|gb|ABJ65804.1| thymidylate kinase [Streptococcus thermophilus LMD-9] Length = 209 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKT+ + +L L+ V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GL R+ ++ + + + +H++ RQ +LD Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE----REVNRLDLEKLDMHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A +P+R +D++ + + V + I+ + Sbjct: 177 LAEAEPERIKRIDASQTLEEVVEDTWEIIKSYL 209 >gi|254514398|ref|ZP_05126459.1| thymidylate kinase [gamma proteobacterium NOR5-3] gi|219676641|gb|EED33006.1| thymidylate kinase [gamma proteobacterium NOR5-3] Length = 210 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 114/208 (54%), Gaps = 6/208 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EGAGK+T ++ ++R L+ D+ TREPGGT E R LL+ Sbjct: 1 MFITLEGGEGAGKSTAMTYVERGLREAGVDLICTREPGGTRLGEQLRETLLAPSETGINP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ AAR H+ I PAL G+ +LCDRF D+SYAYQG + + L+E+ Sbjct: 61 LAELLMMFAARAQHLSECILPALGRGQWVLCDRFTDASYAYQGAGRNMGESPVAVLEELV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T++LD+P + GL R + R LD FE++D E+ RQ +L A+ Sbjct: 121 QGGLRPDLTLLLDVPSETGLSRARGR------GALDRFEQEDHAFFERVRQSYLSRAKRS 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 R I+D++ +V + +V +L+ Sbjct: 175 SGRYQIIDASADLAAVEQALEAVVQDLL 202 >gi|254434496|ref|ZP_05048004.1| thymidylate kinase [Nitrosococcus oceani AFC27] gi|207090829|gb|EDZ68100.1| thymidylate kinase [Nitrosococcus oceani AFC27] Length = 213 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI EGIEGAGK+T + +++ LQ +V VTREPGGT E R +LLS ++ Sbjct: 1 MGRGRFIVLEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ E ++ AAR++HV+ VI PAL GK +LCDRF +SYAYQG + L Sbjct: 61 GMSADTELLLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ + PD ++ D+PV +GL+R R LD FE++ + ++ R I+L + Sbjct: 121 ESWALNCLRPDLILLFDVPVRLGLQRATTRCQ-----QLDRFEQEKIDFFDRARTIYLSL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A+ PD+ ++DS+ V I ++ +++ Sbjct: 176 AKKYPDQYRLIDSSLPLTRVQEAIQKVIMAFLEE 209 >gi|326389200|ref|ZP_08210768.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] gi|325994563|gb|EGD52987.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] Length = 203 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT I L+ +L ++ Y++ V REPGGT E R +LL + Sbjct: 2 RGKFISFEGIDGCGKTTQIKFLEEYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PAL +G+I++ DRF+DSSY YQG + + E Sbjct: 61 SPVTEMLLYASSRAQLVEEKILPALEKGQIVILDRFVDSSYVYQGYARGLGIEKVKLVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ ++PD TI +D+ + +KR R D E++ H+K R+ ++ + + Sbjct: 121 IATMGILPDVTIYIDITPEEAMKRRGKR-------EADRLEKESWGFHKKVREGYIKLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +D V +I+++V + + Sbjct: 174 EFPKRFVFIDGMQELMKVHQDIIDVVKKYL 203 >gi|329850687|ref|ZP_08265532.1| thymidylate kinase [Asticcacaulis biprosthecum C19] gi|328841002|gb|EGF90573.1| thymidylate kinase [Asticcacaulis biprosthecum C19] Length = 218 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 5/210 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G FI FEG EGAGK+T + L + L+ +V TREPGG+P AE R++L+ Sbjct: 7 STGRFIVFEGGEGAGKSTQVQALVKRLRDFGLEVVQTREPGGSPGAEVLRNLLVQGDAGR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +E ++ AAR DH+E VIRPAL G ++CDRF DSS AYQG F++ + Sbjct: 67 WSPMSETLMMYAARSDHLETVIRPALERGAWVVCDRFADSSRAYQGAGGGVAPEFIEQID 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V + PD ++LD+PV+ GL R R + FE K + HE+ RQ FL+ A Sbjct: 127 AAVVGDTQPDLVLVLDMPVEAGLARASARGDKE-----NRFESKGLAFHERLRQGFLNRA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R + ++ + + +I ++ Sbjct: 182 AKVPERYRVFNADQPIEPLFNDIWRVMARA 211 >gi|317483375|ref|ZP_07942367.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA] gi|322690345|ref|YP_004219915.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217] gi|316915192|gb|EFV36622.1| thymidylate kinase [Bifidobacterium sp. 12_1_47BFAA] gi|320455201|dbj|BAJ65823.1| thymidylate kinase [Bifidobacterium longum subsp. longum JCM 1217] Length = 206 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 116/212 (54%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 SGLF+SFEG++G GKTT + L +L+ + V VTREPGGT +A R +LL G Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLHAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ + S Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++PD T +LD+ + R+++ D E + RQ FLD Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +A +P+R ++D++ S ++V I + + EL Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205 >gi|163743050|ref|ZP_02150433.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10] gi|161383733|gb|EDQ08119.1| thymidylate kinase [Phaeobacter gallaeciensis 2.10] Length = 229 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEGI+G+GK+T LL LQ + +V +TREPGG+ AE R ++L D + Sbjct: 18 GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L + Sbjct: 78 AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TI++D+ GL R + R E FE + + ++ R FL +A Sbjct: 138 MIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR ++D + VA ++L +V + Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVVSTAL 220 >gi|116617408|ref|YP_817779.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431245|ref|ZP_03913299.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122272391|sp|Q03ZG6|KTHY_LEUMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116096255|gb|ABJ61406.1| thymidylate kinase [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227353007|gb|EEJ43179.1| thymidylate kinase [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 213 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 5/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +FISFEG EGAGKT+ + L L+ + D+ TREPGG P +EA R +L Sbjct: 1 MPKPIFISFEGPEGAGKTSVLEALISELKTKLGDDLVTTREPGGNPISEAIRSILQPEED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ I+PAL + KI++ DR++DSS AYQG + Sbjct: 61 NGMDKRTEALLYTAARRQHLVENIKPALDQNKIVISDRYVDSSLAYQGGGRGLGIDNIWE 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ ++PD TI LD+PV+IGL RV +D +++ + H+K R+ +L Sbjct: 121 INQFAIDGLLPDMTIYLDVPVEIGLARVNEN----RQGKIDRLDKESISFHQKVRETYLK 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + DR IVD+ V + ++ ++++ + Sbjct: 177 LQSEFSDRIKIVDATQPLNKVIDDTRILINQILEDK 212 >gi|149376737|ref|ZP_01894495.1| thymidylate kinase [Marinobacter algicola DG893] gi|149358976|gb|EDM47442.1| thymidylate kinase [Marinobacter algicola DG893] Length = 210 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 6/213 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG EG GK+T ++ L + VTREPGGTP AE+ R +LL+ + Sbjct: 3 RRGQFITFEGTEGVGKSTQLANAASTLDALGVECVVTREPGGTPMAESIRELLLAPRDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++ AAR H+ I P L G+ +LCDRF D+++AYQG + L+ Sbjct: 63 VNETTELLLMFAARAQHLHTRILPELEAGRWVLCDRFTDATFAYQGGGRGVPTERIALLE 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD ++LD PV+ G+ R ++R LD FE++ V E+ R+ +L A Sbjct: 123 NLVQGTVRPDHVVLLDAPVETGMTRARHR------GELDRFEQEAVAFFERIRETYLARA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 N P R HIVD++ ++V+ + ++ LV + Sbjct: 177 ANAPGRYHIVDASQPIETVSAEVSGLLRNLVNR 209 >gi|467418|dbj|BAA05264.1| unknown [Bacillus subtilis] Length = 212 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AAAR H+ ++PAL +G I+LCDRF+DS AYQG + S+ E Sbjct: 62 DPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSPLAYQGYARGLGIDEVLSINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++MP T+ + + GLKR+ S + + + + + H K ++ + ++ + Sbjct: 122 FAIGDMMPHVTVYFSIDPEEGLKRIYANGSREK----NRLDLEKLDFHTKVQEGYQELMK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H VD+ S V ++L ++ E ++K Sbjct: 178 RFPERFHSVDAGQSKDLVVQDVLKVIDEALKK 209 >gi|149010423|ref|ZP_01831794.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75] gi|168485884|ref|ZP_02710392.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00] gi|182683879|ref|YP_001835626.1| thymidylate kinase [Streptococcus pneumoniae CGSP14] gi|303254972|ref|ZP_07341051.1| thymidylate kinase [Streptococcus pneumoniae BS455] gi|303259845|ref|ZP_07345820.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293] gi|303262259|ref|ZP_07348203.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292] gi|303264681|ref|ZP_07350599.1| thymidylate kinase [Streptococcus pneumoniae BS397] gi|303267182|ref|ZP_07353049.1| thymidylate kinase [Streptococcus pneumoniae BS457] gi|303269430|ref|ZP_07355199.1| thymidylate kinase [Streptococcus pneumoniae BS458] gi|238691153|sp|B2IP90|KTHY_STRPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147764904|gb|EDK71833.1| thymidylate kinase [Streptococcus pneumoniae SP19-BS75] gi|182629213|gb|ACB90161.1| thymidylate kinase [Streptococcus pneumoniae CGSP14] gi|183570969|gb|EDT91497.1| thymidylate kinase [Streptococcus pneumoniae CDC1087-00] gi|302598052|gb|EFL65119.1| thymidylate kinase [Streptococcus pneumoniae BS455] gi|302636582|gb|EFL67073.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS292] gi|302639050|gb|EFL69510.1| thymidylate kinase [Streptococcus pneumoniae SP-BS293] gi|302641049|gb|EFL71427.1| thymidylate kinase [Streptococcus pneumoniae BS458] gi|302643297|gb|EFL73577.1| thymidylate kinase [Streptococcus pneumoniae BS457] gi|302645768|gb|EFL75997.1| thymidylate kinase [Streptococcus pneumoniae BS397] Length = 212 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLELHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|225861172|ref|YP_002742681.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14] gi|298230558|ref|ZP_06964239.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254568|ref|ZP_06978154.1| thymidylate kinase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503053|ref|YP_003724993.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A] gi|254808311|sp|C1CRV9|KTHY_STRZT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225727066|gb|ACO22917.1| thymidylate kinase [Streptococcus pneumoniae Taiwan19F-14] gi|298238648|gb|ADI69779.1| thymidylate kinase [Streptococcus pneumoniae TCH8431/19A] gi|327389215|gb|EGE87560.1| thymidylate kinase [Streptococcus pneumoniae GA04375] Length = 212 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V +++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKSVLFD 206 >gi|270291181|ref|ZP_06197404.1| thymidylate kinase [Pediococcus acidilactici 7_4] gi|270280577|gb|EFA26412.1| thymidylate kinase [Pediococcus acidilactici 7_4] Length = 210 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 123/214 (57%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M +G FISFEG +GAGKTT + + + + D + VTREPGG P +EA R ++L Sbjct: 1 MVNGHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E A EA+++AAAR H+ I PAL G+++ CDR++DSS AYQG + Sbjct: 61 TEMDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQ 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + +P+ TI LD+ ++GLKR+ + +D + + + HE+ R +L Sbjct: 121 MNLFATEGCLPEKTIYLDVSAEVGLKRIM----THRTDDVDRLDLEQLDFHERVRDAYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ P+R ++D++ S V ++N++ ++++ Sbjct: 177 LAKRYPERIVVIDASQSIGDVKKAVINVLDQILK 210 >gi|261380492|ref|ZP_05985065.1| dTMP kinase [Neisseria subflava NJ9703] gi|284796744|gb|EFC52091.1| dTMP kinase [Neisseria subflava NJ9703] Length = 208 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 7/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ + Sbjct: 2 KPRFITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 61 GLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++LD+P+++ + R+ + D FE+++ + R+++L A Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARINQ------TREKDRFEQEEAEFFNRVREVYLQRAN 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 QP+R ++DS+ S +V I + Sbjct: 175 EQPERYAVIDSSQSLDAVKNQIETAL 200 >gi|225856597|ref|YP_002738108.1| thymidylate kinase [Streptococcus pneumoniae P1031] gi|254808310|sp|C1CK20|KTHY_STRZP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225725389|gb|ACO21241.1| thymidylate kinase [Streptococcus pneumoniae P1031] gi|301794077|emb|CBW36481.1| thymidylate kinase [Streptococcus pneumoniae INV104] Length = 212 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|312277894|gb|ADQ62551.1| Thymidylate kinase [Streptococcus thermophilus ND03] Length = 209 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKT+ + +L L+ V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTSVLKVLLPRLREVYPAQVITTREPGGVAIAEQIREVILDIDN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELENGNMVIMDRFIDSSVAYQGAGRGLDQDEVAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GL R+ ++ + + + +H++ RQ +LD Sbjct: 121 LNNYATDGHKPDLTLLFDVDSETGLARIAANGE----REVNRLDLEKIDMHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A +P+R +D++ + + V + I+ + Sbjct: 177 LAEAEPERIKRIDASQTLEEVVEDTWEIIKSYL 209 >gi|199599031|ref|ZP_03212438.1| Thymidylate kinase [Lactobacillus rhamnosus HN001] gi|258509257|ref|YP_003172008.1| thymidylate kinase [Lactobacillus rhamnosus GG] gi|199590067|gb|EDY98166.1| Thymidylate kinase [Lactobacillus rhamnosus HN001] gi|257149184|emb|CAR88157.1| Thymidylate kinase [Lactobacillus rhamnosus GG] gi|259650539|dbj|BAI42701.1| thymidylate kinase [Lactobacillus rhamnosus GG] Length = 215 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 4/217 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ L L+ + VH+TREPGG +E R V+L Sbjct: 2 TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL G I++CDRF+DSS AYQG + + Sbjct: 62 MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+PV +GL R+ R+ D +++ + HE+ ++ + Sbjct: 122 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQY---DRLDQESLAFHERVHAAYMKLV 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 + P R VD+ +V T + E + + Sbjct: 179 ADNPKRIVTVDATQPLAAVVTAAFMTITERFPELFAK 215 >gi|226309662|ref|YP_002769556.1| thymidylate kinase [Brevibacillus brevis NBRC 100599] gi|226092610|dbj|BAH41052.1| thymidylate kinase [Brevibacillus brevis NBRC 100599] Length = 213 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 4/211 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG EGAGK+T I+ L L+ + DV +TREPGG AE R ++L+ + Sbjct: 7 KKGRFITIEGGEGAGKSTVIAKLYEELKTRGVDVLLTREPGGIDIAEKIREIILNPAHTQ 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL EGK++LCDRF+DSS AYQG + + Sbjct: 67 MDERTEALLYAAARGQHLAEKVLPALAEGKLVLCDRFIDSSLAYQGHARGLGIDAVYQIN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +V + MP+ T+ D+ + GL R+ ++ + + + HE R+ + + Sbjct: 127 RFAVGDCMPELTLFFDVQPETGLARINA----SRGREVNRLDLEGMRFHELVREGYQLVM 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R ++D+ + V + L + + + Sbjct: 183 ERDPERFVVIDAEQPMEQVYQSALQALLDRL 213 >gi|254503506|ref|ZP_05115657.1| thymidylate kinase [Labrenzia alexandrii DFL-11] gi|222439577|gb|EEE46256.1| thymidylate kinase [Labrenzia alexandrii DFL-11] Length = 224 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 92/222 (41%), Positives = 135/222 (60%), Gaps = 1/222 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG EGAGK+T I+ LK FL+ V VTREPGG+P AE R +LLS + Sbjct: 2 QGHFISFEGGEGAGKSTQIARLKAFLESLGKTVIVTREPGGSPGAEKIRAMLLSGEARDL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ +I+PAL G +LCDR+ DS+ YQGE +L L+ Sbjct: 62 GPRGEAMLFAAARADHVDTLIKPALDRGDWVLCDRYSDSTLVYQGEA-GVDLNYLRLLET 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +V V P+ TI++D+P ++GL RVQ R S D FE + + +HE RR+ FLD+A Sbjct: 121 AAVAGVRPELTILIDVPAELGLARVQERAKTDTSGGPDRFEGEALRVHEGRRKRFLDLAA 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R ++D + ++V+ +I + V Q +++ + ++ Sbjct: 181 EEAYRFAVIDGSKDLEAVSASIQSAVEAAFQDQLTTDTPAQE 222 >gi|163814924|ref|ZP_02206312.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759] gi|158449863|gb|EDP26858.1| hypothetical protein COPEUT_01075 [Coprococcus eutactus ATCC 27759] Length = 207 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+ EG +GAGKTT LLK +L++K YDV +TR+PGG P +EA R V+L+ E Sbjct: 2 RGIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKEFTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E +++A+AR V+ I+PAL G+ ++ DRF+DSS YQG + + E Sbjct: 62 GYMTELLLYASARAQLVKENIKPALEAGQAVIADRFVDSSAVYQGIGRGLGVDTVYKINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++Q +MPD T ++DL G+ R +N A LD E + + H+K + +A Sbjct: 122 FALQGIMPDMTFLMDLNAQEGIARKKN------QAELDRMENEKIEFHQKVVDGYRMLAD 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +D+ + I V + + Sbjct: 176 MHPERIVKIDATLPINEIHGIITKYVEKKLN 206 >gi|15900815|ref|NP_345419.1| thymidylate kinase [Streptococcus pneumoniae TIGR4] gi|111658126|ref|ZP_01408824.1| hypothetical protein SpneT_02000692 [Streptococcus pneumoniae TIGR4] gi|148984675|ref|ZP_01817943.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71] gi|148988371|ref|ZP_01819818.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73] gi|148996974|ref|ZP_01824628.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70] gi|149002482|ref|ZP_01827416.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69] gi|149006392|ref|ZP_01830104.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74] gi|149019523|ref|ZP_01834842.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72] gi|168575597|ref|ZP_02721533.1| thymidylate kinase [Streptococcus pneumoniae MLV-016] gi|194397492|ref|YP_002037572.1| thymidylate kinase [Streptococcus pneumoniae G54] gi|225854440|ref|YP_002735952.1| thymidylate kinase [Streptococcus pneumoniae JJA] gi|225858732|ref|YP_002740242.1| thymidylate kinase [Streptococcus pneumoniae 70585] gi|237651112|ref|ZP_04525364.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974] gi|237821889|ref|ZP_04597734.1| thymidylate kinase [Streptococcus pneumoniae CCRI 1974M2] gi|307067591|ref|YP_003876557.1| thymidylate kinase [Streptococcus pneumoniae AP200] gi|307127513|ref|YP_003879544.1| thymidylate kinase [Streptococcus pneumoniae 670-6B] gi|23821803|sp|Q97R91|KTHY_STRPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690815|sp|B5E437|KTHY_STRP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808306|sp|C1C6R6|KTHY_STRP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808309|sp|C1CDT1|KTHY_STRZJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|14972410|gb|AAK75059.1| thymidylate kinase [Streptococcus pneumoniae TIGR4] gi|147756674|gb|EDK63714.1| thymidylate kinase [Streptococcus pneumoniae SP11-BS70] gi|147759419|gb|EDK66411.1| thymidylate kinase [Streptococcus pneumoniae SP14-BS69] gi|147762169|gb|EDK69131.1| thymidylate kinase [Streptococcus pneumoniae SP18-BS74] gi|147923066|gb|EDK74181.1| thymidylate kinase [Streptococcus pneumoniae SP3-BS71] gi|147926052|gb|EDK77126.1| thymidylate kinase [Streptococcus pneumoniae SP6-BS73] gi|147930898|gb|EDK81878.1| thymidylate kinase [Streptococcus pneumoniae SP23-BS72] gi|183578645|gb|EDT99173.1| thymidylate kinase [Streptococcus pneumoniae MLV-016] gi|194357159|gb|ACF55607.1| thymidylate kinase [Streptococcus pneumoniae G54] gi|225720178|gb|ACO16032.1| thymidylate kinase [Streptococcus pneumoniae 70585] gi|225723023|gb|ACO18876.1| thymidylate kinase [Streptococcus pneumoniae JJA] gi|301799917|emb|CBW32496.1| thymidylate kinase [Streptococcus pneumoniae OXC141] gi|306409128|gb|ADM84555.1| Thymidylate kinase [Streptococcus pneumoniae AP200] gi|306484575|gb|ADM91444.1| thymidylate kinase [Streptococcus pneumoniae 670-6B] gi|332075547|gb|EGI86015.1| thymidylate kinase [Streptococcus pneumoniae GA17545] gi|332076213|gb|EGI86679.1| thymidylate kinase [Streptococcus pneumoniae GA41301] Length = 212 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|254469249|ref|ZP_05082654.1| thymidylate kinase [Pseudovibrio sp. JE062] gi|211961084|gb|EEA96279.1| thymidylate kinase [Pseudovibrio sp. JE062] Length = 227 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 88/222 (39%), Positives = 135/222 (60%), Gaps = 1/222 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FISFEG EGAGK+T I L+ L K + TREPGG+ AE R VLLS ++ Sbjct: 2 SGIFISFEGGEGAGKSTQIQRLRDKLAAKGIEAVTTREPGGSQGAELVREVLLSGAAKDY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AEA++FAAAR DH++ +I+PAL GK +LCDRF DSS YQGE +++LQ+ Sbjct: 62 GVTAEAVLFAAARADHIDTLIKPALENGKWVLCDRFADSSRVYQGE-SGVPTPTVEALQQ 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ P+ T+++++ ++GL RV R + E D FE + H +R+++FL++AR Sbjct: 121 VAIAGHNPNMTLLINVTPEVGLARVSKRTAPVEFDGPDRFETDTLETHRRRQELFLEMAR 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 N+PDR ++D V +I V + +++ + + D Sbjct: 181 NEPDRIVVIDGDQPQDKVTEDIWRAVQDRFAEQIQQETGEPD 222 >gi|229542305|ref|ZP_04431365.1| thymidylate kinase [Bacillus coagulans 36D1] gi|229326725|gb|EEN92400.1| thymidylate kinase [Bacillus coagulans 36D1] Length = 217 Score = 255 bits (653), Expect = 3e-66, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+ EG EGAGKTT ++ L+ Y V +TREPGG AE RH++L+ E Sbjct: 2 KGIFITAEGPEGAGKTTITGMIAAHLKENGYPVVLTREPGGIKIAEQIRHIILNPENTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA+R H+ + PAL +G+I+LCDRF+DSS AYQG + + + Sbjct: 62 DARTEALLYAASRRQHLAEKVLPALEQGRIVLCDRFIDSSLAYQGYARGIGIEEVYRINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T+ D+ + GL R+ ++ ++ + + + H K R+ F + + Sbjct: 122 FATGGLLPDLTLYFDVEAETGLSRIAKNHN----REVNRLDLEAIDFHRKVREGFQILLK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R H +D+ + + L V + + Sbjct: 178 RFPERIHAIDANKEVEYIYHTALQKVLDAI 207 >gi|322374522|ref|ZP_08049036.1| dTMP kinase [Streptococcus sp. C300] gi|321280022|gb|EFX57061.1| dTMP kinase [Streptococcus sp. C300] Length = 212 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALKAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDATKAVLFDRM 208 >gi|331266594|ref|YP_004326224.1| thymidylate kinase [Streptococcus oralis Uo5] gi|326683266|emb|CBZ00884.1| thymidylate kinase [Streptococcus oralis Uo5] Length = 212 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALGAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ + ++ + + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDTTKAVLFDRM 208 >gi|168494363|ref|ZP_02718506.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06] gi|221231705|ref|YP_002510857.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669] gi|254808307|sp|B8ZP37|KTHY_STRPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|183575667|gb|EDT96195.1| thymidylate kinase [Streptococcus pneumoniae CDC3059-06] gi|220674165|emb|CAR68688.1| thymidylate kinase [Streptococcus pneumoniae ATCC 700669] Length = 212 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILKEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|56961832|ref|YP_173554.1| thymidylate kinase [Bacillus clausii KSM-K16] gi|59798132|sp|Q5WLY2|KTHY_BACSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56908066|dbj|BAD62593.1| thymidylate kinase [Bacillus clausii KSM-K16] Length = 213 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG EGAGKTT I+L++ L + Y+V TREPGG AE R +LL Sbjct: 1 MKKGLFITVEGGEGAGKTTIINLVQEQLATQGYEVIRTREPGGVELAEQIRDLLLHTQGV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AAAR +H+ I PAL EG ++LCDR++DSS YQG + ++ Sbjct: 61 EMDNRTEALLYAAARREHLIKKIVPALAEGALVLCDRYIDSSLVYQGHARGIGMEEVRAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ MPD T+ D+ +IGL+RVQ + +++ + H++ ++ + + Sbjct: 121 NGFAIETYMPDLTLYFDVEPEIGLERVQK----DAVRSWNRLDQETLTFHKRVQEGYKKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +P+R +D+ SF V + + + ++ Sbjct: 177 LKAEPERIKAIDANRSFAEVFHDTMEEINRML 208 >gi|240141008|ref|YP_002965488.1| thymidylate kinase [Methylobacterium extorquens AM1] gi|240010985|gb|ACS42211.1| thymidylate kinase [Methylobacterium extorquens AM1] Length = 249 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 4/207 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL Sbjct: 7 RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G AEA++FAAAR+DH+ N+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 67 YGPFAEALMFAAARIDHIGNLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++++ PD T+ILDLP + GL R + R + D FE + + HE+ R F IA Sbjct: 127 RVTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIA 183 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+RC ++D+ +V T I N + Sbjct: 184 EAEPERCRVIDADLGPDAVETAIANAI 210 >gi|241759767|ref|ZP_04757867.1| dTMP kinase [Neisseria flavescens SK114] gi|241319775|gb|EER56171.1| dTMP kinase [Neisseria flavescens SK114] Length = 208 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 7/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ V + Sbjct: 2 KPRFITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNP-VTQV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 61 SLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++LD+P+++ + R+ + D FE+++ + R+++L A Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARINQ------TREKDRFEQEEAEFFNRVREVYLQRAN 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 QP+R ++DS+ S +V I + Sbjct: 175 EQPERYAVIDSSQSLDAVKNQIETAL 200 >gi|225848089|ref|YP_002728252.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643400|gb|ACN98450.1| thymidylate kinase [Sulfurihydrogenibium azorense Az-Fu1] Length = 204 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 8/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEGIEG+GK+T L +L ++TREPGGT + R +LLS + F Sbjct: 2 GVFITFEGIEGSGKSTQAKRLYEYLTNIGIKAYLTREPGGTSIGKKIREILLSHWEENFP 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AE +++ A R HV N+I+P L + I++ DRF DS+ AYQ + +D L ++ Sbjct: 62 SIAELLLYQADRNIHVNNIIKPLLQQDYIVISDRFYDSTTAYQHYARGIDYSIVDYLNKL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + P T +LDLPV KR+ + D E + + H+K R+ FL IA Sbjct: 122 ATEGIKPHITFLLDLPVQEAFKRL--------NREKDRLESEGLNFHQKVREGFLKIADM 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 + DR ++D S + ILNI+ E Sbjct: 174 EKDRVIVLDGLKSPDEIFNQILNILKE 200 >gi|282898411|ref|ZP_06306402.1| Thymidylate kinase [Raphidiopsis brookii D9] gi|281196942|gb|EFA71847.1| Thymidylate kinase [Raphidiopsis brookii D9] Length = 216 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 7/206 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-F 62 G I FEG+EG+GKTT + +L ++LQ +TREPGGT + R +LL ++ Sbjct: 3 GKLIVFEGVEGSGKTTQMQMLAQWLQTLGISFLLTREPGGTDLGKNLRKLLLETSYEQPL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++ A R HV ++I+P L GK +LCDR+ +S+ AYQG +D L + Sbjct: 63 DEMAELLLYTADRSQHVSSIIKPNLATGKYILCDRYTNSTIAYQGYGRGLNMTIIDQLNQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + D TI LD+ V+IGL R R A LD E++ + H + ++ + +IA+ Sbjct: 123 IATGGLESDLTIWLDIDVEIGLSRK------RGQAELDRMEQETIEFHHRVQKGYNEIAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N P + VD + V NI I+ Sbjct: 177 NHPSKMIRVDGNGGQELVQENIRKIL 202 >gi|312109177|ref|YP_003987493.1| thymidylate kinase [Geobacillus sp. Y4.1MC1] gi|311214278|gb|ADP72882.1| thymidylate kinase [Geobacillus sp. Y4.1MC1] Length = 210 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 4/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F SFEG EGAGKTT I++L+ FL+ K +DV TREPGG AE R ++L+ E Sbjct: 2 KGRFFSFEGPEGAGKTTMIAMLESFLREKGFDVLATREPGGVRIAEEIRSIILNPAHTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PA+ GKI+LCDRF+DSS AYQG + + + Sbjct: 62 DGRTEALLYAAARRQHLLEKIIPAVKSGKIVLCDRFIDSSLAYQGFARELGMDEILQINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ P TI D+ +GL+R+Q + ++ + +++ H K R+ +L +A+ Sbjct: 122 FAIDGYFPTLTIYFDIDPKMGLERIQKN----KQREMNRLDMENLSFHYKVREGYLKLAK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 DR +D++ S V + + + + +R Sbjct: 178 RFSDRIITIDASKSVDEVFAMTVAAIMDRIGER 210 >gi|256827903|ref|YP_003156631.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028] gi|256577079|gb|ACU88215.1| thymidylate kinase [Desulfomicrobium baculatum DSM 4028] Length = 211 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 1/207 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEG+EG GK+T L R+ +DV T EPGG+ + R +LL + + Sbjct: 1 MFLTFEGMEGCGKSTQCKKLIEHFVRQGHDVLHTLEPGGSRLGKELRRILLDPKNSDLSS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++ A R HV +VIRPA+ +G+ ++CDRF DS+ YQG L L +++ Sbjct: 61 TSELFLYLADRAQHVSSVIRPAMEDGRTVICDRFADSTVVYQGYGRGLDPSLLHHLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 VQ + PD TI+LD+ +IGL+R R + FE + + H + R+ +L A Sbjct: 121 VQGLWPDMTILLDVEPEIGLRRALTRNMQDNKTATEGRFEAESMAFHTRIREGYLTWAAL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 R +VD+ + +V +IL + E Sbjct: 181 HRGRFLVVDAGRNPDAVFDSILRGLEE 207 >gi|254388750|ref|ZP_05003983.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC 27064] gi|197702470|gb|EDY48282.1| hypothetical protein SSCG_01563 [Streptomyces clavuligerus ATCC 27064] Length = 747 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGK+T L +++ K ++V VTREPG TP + R +LL Sbjct: 151 TGFFIALEGGDGAGKSTQAEALATWIRNKGHEVVVTREPGATPVGKRLRSILLDVASAGL 210 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV +V+RPAL G +++ DR++DSS AYQG + + Sbjct: 211 SNRAEALLYAADRAEHVGSVVRPALERGAVVISDRYIDSSVAYQGAGRDLSPTEIARISR 270 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 271 WATDGLVPHLTVLLDVSPETARERF--------TEAPDRLESEPAEFHRRVRSGFLTLAA 322 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ ++V T + + + +++ Sbjct: 323 GDPARYLVVDAGQEPEAVTTVVRHRLDQML 352 >gi|315221919|ref|ZP_07863830.1| thymidylate kinase [Streptococcus anginosus F0211] gi|315188885|gb|EFU22589.1| thymidylate kinase [Streptococcus anginosus F0211] Length = 212 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FIS EG +GAGK++ + L L+ K TREPGG AE R V+L Sbjct: 1 MAKGIFISLEGPDGAGKSSVLEALIPILEAKGQAFVTTREPGGVAVAEKIRDVVLDPKHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ I PAL G+++L DRF+DSS AYQG + +D L Sbjct: 61 EIDEKTELLLYIASRRQHLVERILPALDRGEMVLVDRFIDSSVAYQGFGRGLKVADIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ + GL R+ + D +R+ V H + R+ +L I Sbjct: 121 NDFATDGLKPDLTLYFDIEAEEGLARIAK----SKERGADRLDRESVEWHRRVREGYLSI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P+R +D++ + V + L ++ E V+ Sbjct: 177 LEKEPNRVRKIDASQPLEKVVADTLAVLAERVE 209 >gi|163853588|ref|YP_001641631.1| dTMP kinase [Methylobacterium extorquens PA1] gi|163665193|gb|ABY32560.1| dTMP kinase [Methylobacterium extorquens PA1] Length = 244 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 4/207 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL Sbjct: 7 RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G AEA++FAAAR+DH+EN+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 67 YGPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++++ PD T+ILDLP + GL R + R + D FE + + HE+ R F IA Sbjct: 127 RVTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIA 183 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +P+RC ++D+ +V T I + Sbjct: 184 EAEPERCRVIDADLGLDAVETAIAAAI 210 >gi|294496900|ref|YP_003560600.1| thymidylate kinase [Bacillus megaterium QM B1551] gi|294346837|gb|ADE67166.1| thymidylate kinase [Bacillus megaterium QM B1551] Length = 208 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 118/211 (55%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT I ++++ L ++ Y + +TREPGG AE R ++L+ E Sbjct: 2 SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYTIVLTREPGGIRIAEQIREIILNPSNTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + P L +G I+LCDRF+DSS AYQG + ++ + Sbjct: 62 DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++++ MP T+ D+ ++GL+R+ N ++ + + + H K R +L + Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERINN----GRKDEINRLDLESLDFHYKVRDGYLSLLS 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +D+ S + V + +++ Sbjct: 178 EFPERIRRIDANQSVEKVCEEAYKQIKLILK 208 >gi|270292959|ref|ZP_06199170.1| dTMP kinase [Streptococcus sp. M143] gi|270278938|gb|EFA24784.1| dTMP kinase [Streptococcus sp. M143] Length = 212 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRIVKIDASLPLEQVVDATKAVLFDRM 208 >gi|294056288|ref|YP_003549946.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221] gi|293615621|gb|ADE55776.1| thymidylate kinase [Coraliomargarita akajimensis DSM 45221] Length = 209 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 5/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62 GLFISFEG EG GK+T I L L+ + DV TREPGGTP +EA R++L + Sbjct: 3 GLFISFEGSEGCGKSTQIRALASRLEAEGIDVVRTREPGGTPLSEAIRNLLQHDEAGEGM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEAE ++FAAAR VI PA GK +L DRF+DS+ YQG + H + ++ + Sbjct: 63 CAEAELLLFAAARAQLTREVIAPARRAGKAVLSDRFMDSTTVYQGVARALAHDDVAAINQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +V PD TI++DL ++GL+RV+ R LD ER+ + + RQ +L +A Sbjct: 123 FAVGTHKPDLTILIDLDPEVGLQRVKARS----GGQLDRMEREALDFFQAVRQGYLALAE 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R ++D H+ +++ I N V + + Sbjct: 179 QESKRFLVLDGNHTIEALEQEIWNAVRQRL 208 >gi|218294864|ref|ZP_03495718.1| dTMP kinase [Thermus aquaticus Y51MC23] gi|218244772|gb|EED11296.1| dTMP kinase [Thermus aquaticus Y51MC23] Length = 201 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG++G+GK+T LL FL+ + V +TREPGG R +LL+ Sbjct: 2 AGLFLTLEGLDGSGKSTQAKLLAAFLEGRGLPVVLTREPGGGLPG--VRDLLLNPLKGPL 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++ +A R +HV VI P+L G ++ DR+LDSS AYQG +L + + Sbjct: 60 SPEAEYLLLSADRAEHVRKVILPSLEAGAWVVSDRYLDSSLAYQGFGRGLPLPWLLEVAK 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T +LDLP + L+RV++ D ER+ + ++ R+ +L +A+ Sbjct: 120 EATLGLTPRLTFLLDLPPEEALRRVKD---------PDRLEREGLAFFQRVREGYLFLAK 170 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R ++D+ S ++VA I + L+ Sbjct: 171 EEPHRFVVLDATESVEAVAQRIQAHLLPLL 200 >gi|296111513|ref|YP_003621895.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154] gi|295833045|gb|ADG40926.1| thymidylate kinase [Leuconostoc kimchii IMSNU 11154] Length = 214 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 118/216 (54%), Gaps = 5/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ ++ L+ F Q D+ TREPGG P +EA R +L Sbjct: 1 MTKPLFITFEGPEGAGKTSVLNQLVAEFQQTLGDDLISTREPGGNPISEAIRAILQPEED 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++ AAR H+ + PAL GK+++ DR++DSS AYQG + Sbjct: 61 NGMDDRTEALLYTAARRQHLVETVLPALKAGKVVISDRYVDSSLAYQGGGRGLGVDHIWQ 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ ++PD TI DLP ++GL RV+ +D +++ + H+K R+ +L+ Sbjct: 121 INQFAIDGLLPDLTIYFDLPSELGLARVKAN----RQGKIDRLDKESLAFHQKVRKTYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + DR IVD+ S +V ++ E ++ R Sbjct: 177 LQVKFSDRIKIVDATQSLDNVVDATRQLILERMKYR 212 >gi|225075646|ref|ZP_03718845.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens NRL30031/H210] gi|224953068|gb|EEG34277.1| hypothetical protein NEIFLAOT_00662 [Neisseria flavescens NRL30031/H210] Length = 208 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ + Sbjct: 2 KPRFITLDGIDGAGKSTNLAVMKAWFEKHQLPVLFTREPGGTPAGEALREILLNPAT-QV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 61 SLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++LD+P+++ + RV + D FE++ + R+++L A Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARVNQ------TREKDRFEQEKAEFFNRVREVYLQRAN 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 QP+R ++DS+ S +V I ++ Sbjct: 175 EQPERYAVIDSSQSLDAVKNQIETVL 200 >gi|326795549|ref|YP_004313369.1| Thymidylate kinase [Marinomonas mediterranea MMB-1] gi|326546313|gb|ADZ91533.1| Thymidylate kinase [Marinomonas mediterranea MMB-1] Length = 208 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 119/213 (55%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG EG+GK+T I+ L+++++ + +TREPGGTP AE R V+LS + Sbjct: 2 KGKFITLEGGEGSGKSTAIACLEQWMKAQGIPYLLTREPGGTPLAEEIRQVVLSKRDETV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR HV I PAL G ++ DRF+DSSY YQG +DSL Sbjct: 62 NSITELLLVFAARAQHVAQKIAPALESGVWVISDRFIDSSYVYQGVARGLDIEDIDSLVR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V +PD TI+LD+PV +G+ RV R D + + HE R FLD+A+ Sbjct: 122 LAVGASLPDKTILLDVPVSVGMARVSARTGN------DRLDGESTQFHEMVRAGFLDLAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R IVD++ ++V I+ I+ ++ Q + Sbjct: 176 RDSHRISIVDASVPQENVFEQIVTILEQVKQAK 208 >gi|168491022|ref|ZP_02715165.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04] gi|183574610|gb|EDT95138.1| thymidylate kinase [Streptococcus pneumoniae CDC0288-04] Length = 212 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|311070675|ref|YP_003975598.1| thymidylate kinase [Bacillus atrophaeus 1942] gi|310871192|gb|ADP34667.1| thymidylate kinase [Bacillus atrophaeus 1942] Length = 212 Score = 255 bits (652), Expect = 4e-66, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 121/212 (57%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K+ L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEIKKSLAARGLQVTATREPGGIDIAEQIREVILNEKNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR H+ ++PAL +G I+LCDRF+DSS AYQG + S+ E Sbjct: 62 DAKTEALLYAAARRQHLVEKVKPALEQGHIVLCDRFIDSSLAYQGYARGLGIDEVLSINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++MP+ T+ + + GL R+ + + + +++ H + R+ + ++ + Sbjct: 122 FAIGDMMPNLTVYFSIKPEEGLSRIHANGLREK----NRLDLEELSFHTRVREGYHELMK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R +D++ S + V ++ ++ E ++K Sbjct: 178 RFPKRFRTIDASQSKERVIEDVQIVINEALKK 209 >gi|325845428|ref|ZP_08168721.1| dTMP kinase [Turicibacter sp. HGF1] gi|325488534|gb|EGC90950.1| dTMP kinase [Turicibacter sp. HGF1] Length = 222 Score = 254 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 4/214 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG FI+ EG EGAGKTT + L + L + TREPGG AE R V+L Sbjct: 13 MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + EA+++AAAR H+ ++PA+ GKI+LCDRF+DSS YQG + + Sbjct: 73 EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQGYARGIGMDEVREI 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ MPD TI D+ + GL R+ ++ + + + H+ + + Sbjct: 133 NQFAIEGFMPDMTIFFDIKPEDGLARIAANS----GREVNRLDLEGLEFHQLVYEGYKIQ 188 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A +R VD+ S ++V I ++ E + K Sbjct: 189 ANLFSERIVTVDATQSIEAVTNEICQLILEKLGK 222 >gi|110003916|emb|CAK98256.1| thymidylate kinase protein [Spiroplasma citri] Length = 215 Score = 254 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ EGI+G+GKTT LLK L+ + Y V +TREPGG AE R+V+LS Sbjct: 3 LFITLEGIDGSGKTTISKLLKEKLRSEGYQVVLTREPGGNEIAEQIRNVILSKHNLGMDP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++ AAR HV I PAL G+I++CDRF+DS+ AYQG LD +Q I Sbjct: 63 WTEALLYIAARRQHVVEDILPALKRGEIVICDRFMDSTSAYQGYARGLGIWTLDEVQSIV 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T+ D+ + +R++ R + ++ + + H+K + + + Sbjct: 123 LGTTKPDLTLFFDIEPTMASERMKVRNEVE----MNRLDLEKNSFHKKVYEGYQVLISEN 178 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R ++D++ V + V E++QK Sbjct: 179 AERIKVIDASKPVNEVLEQVYYYVDEIIQK 208 >gi|154684547|ref|YP_001419708.1| thymidylate kinase [Bacillus amyloliquefaciens FZB42] gi|166221718|sp|A7Z0F1|KTHY_BACA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|154350398|gb|ABS72477.1| Tmk [Bacillus amyloliquefaciens FZB42] Length = 212 Score = 254 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 122/212 (57%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLFI+FEG EGAGKTT + +K L + V TREPGG AE R V+L+ Sbjct: 2 SGLFITFEGPEGAGKTTVLQEMKEILSAEGLPVTATREPGGIDIAEQIREVILNKNNTLM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA+++AAAR H+ ++PAL EG+I+LCDRF+DSS AYQG + S+ + Sbjct: 62 DAKTEALLYAAARRQHLAEKVQPALKEGRIVLCDRFIDSSLAYQGYARGLGIDEVLSINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + MPD TI + + GLKR+ + +S + + + + H K R+ + + + Sbjct: 122 FAIGDTMPDVTIYFSIEPEEGLKRITSN----DSREKNRLDLEALHFHTKVREGYQKVMQ 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R H +D++ + V + L ++ E ++K Sbjct: 178 RFPERFHTIDASKKKELVIQDALQVINEALKK 209 >gi|302341674|ref|YP_003806203.1| thymidylate kinase [Desulfarculus baarsii DSM 2075] gi|301638287|gb|ADK83609.1| thymidylate kinase [Desulfarculus baarsii DSM 2075] Length = 226 Score = 254 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 1/209 (0%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG EG GK+T S+L R ++ V +TREPGG + R +LL G + Sbjct: 13 FITLEGGEGCGKSTQASMLGRRIRGLGLKVVLTREPGGASLGQTIRELLLGPGQEPVDPV 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++F A R HV I PAL+ G++++CDRF DSS YQG + L + Sbjct: 73 TELLLFLADRSHHVRAKIEPALLRGEVVVCDRFADSSEVYQGLARGLGLERVRRLNQWVC 132 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LDL +GL R R E++ + HE+ R+ FL A+ +P Sbjct: 133 GQCWPDLTLLLDLNPGLGLARAAQRQG-ELGQGPSPMEKEKLEFHERLREGFLAQAQAEP 191 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R VD+A + VA I V L+++ Sbjct: 192 GRIKPVDAARPAEEVAEAIWAHVEPLLRE 220 >gi|295702267|ref|YP_003595342.1| thymidylate kinase [Bacillus megaterium DSM 319] gi|294799926|gb|ADF36992.1| thymidylate kinase [Bacillus megaterium DSM 319] Length = 208 Score = 254 bits (651), Expect = 4e-66, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT I ++++ L ++ Y++ +TREPGG AE R ++L+ E Sbjct: 2 SGTFITFEGPEGAGKTTIIHMVQQKLIQEGYNIVLTREPGGIRIAEQIREIILNPSNTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + P L +G I+LCDRF+DSS AYQG + ++ + Sbjct: 62 DARTEALLYAAARRQHLVEKVIPELNKGNIVLCDRFIDSSLAYQGNARGIGVEDIFAINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++++ MP T+ D+ ++GL+R+ ++ + + + H K R +L + Sbjct: 122 FAIEQTMPQATLYFDIEPEVGLERINK----GRKDEINRLDLESLDFHYKVRDGYLSLLS 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +D+ S + V + +++ Sbjct: 178 EFPERIRRIDANQSVEKVCEEAYKQIKLILK 208 >gi|169832724|ref|YP_001694387.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6] gi|238688287|sp|B1IBA2|KTHY_STRPI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|168995226|gb|ACA35838.1| thymidylate kinase [Streptococcus pneumoniae Hungary19A-6] Length = 212 Score = 254 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEVKGVKVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LEKEGNRIVKIDASLPLEQVVETTKAVLFD 206 >gi|227545645|ref|ZP_03975694.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622679|ref|ZP_04665710.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133481|ref|YP_004000820.1| tmk [Bifidobacterium longum subsp. longum BBMN68] gi|322688333|ref|YP_004208067.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F] gi|46576601|sp|Q8G6Z6|KTHY_BIFLO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|227213761|gb|EEI81600.1| dTMP kinase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514676|gb|EEQ54543.1| thymidylate kinase [Bifidobacterium longum subsp. infantis CCUG 52486] gi|311772719|gb|ADQ02207.1| Tmk [Bifidobacterium longum subsp. longum BBMN68] gi|320459669|dbj|BAJ70289.1| thymidylate kinase [Bifidobacterium longum subsp. infantis 157F] Length = 206 Score = 254 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 +GLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL G Sbjct: 2 NGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ + S Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++PD T +LD+ + R+++ D E + RQ FLD Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +A +P+R ++D++ S ++V I + + EL Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205 >gi|309775015|ref|ZP_07670030.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53] gi|308917233|gb|EFP62958.1| dTMP kinase [Erysipelotrichaceae bacterium 3_1_53] Length = 210 Score = 254 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 114/216 (52%), Gaps = 6/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLFI+FEG +G+GKTT L L+ Y V TREPGG AE R V+L Sbjct: 1 MNKGLFITFEGNDGSGKTTISKLAYERLKEMGYPVIYTREPGGIDIAEQIRKVILDPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AA+R H+ + PAL EG I+LCDRF+DSS YQG + ++ Sbjct: 61 AMDERCEALLYAASRRQHLVEKVLPALNEGSIVLCDRFVDSSLVYQGIARGIGMEEVYAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ +PD TI L + + GL RV +R + D + + + H+ Q + I Sbjct: 121 NQFAIEGHLPDATIFLSVDFETGLSRVTSRGNK------DRLDNESMEFHKLVAQGYELI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 DR HIVD+ +V N ++ + E+++ V Sbjct: 175 KEKFKDRMHIVDANADVDTVLNNTVSCIMEIIKNHV 210 >gi|15902879|ref|NP_358429.1| thymidylate kinase [Streptococcus pneumoniae R6] gi|116516561|ref|YP_816308.1| thymidylate kinase [Streptococcus pneumoniae D39] gi|46576561|sp|Q8DQ58|KTHY_STRR6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122278806|sp|Q04KZ0|KTHY_STRP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|15458437|gb|AAK99639.1| Thymidylate kinase [Streptococcus pneumoniae R6] gi|116077137|gb|ABJ54857.1| thymidylate kinase [Streptococcus pneumoniae D39] Length = 212 Score = 254 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R +D++ + V ++++ Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTNAVLFD 206 >gi|314937925|ref|ZP_07845241.1| thymidylate kinase [Enterococcus faecium TX0133a04] gi|314941416|ref|ZP_07848309.1| thymidylate kinase [Enterococcus faecium TX0133C] gi|314948529|ref|ZP_07851909.1| thymidylate kinase [Enterococcus faecium TX0082] gi|314951284|ref|ZP_07854338.1| thymidylate kinase [Enterococcus faecium TX0133A] gi|314992885|ref|ZP_07858286.1| thymidylate kinase [Enterococcus faecium TX0133B] gi|314998089|ref|ZP_07862977.1| thymidylate kinase [Enterococcus faecium TX0133a01] gi|313587931|gb|EFR66776.1| thymidylate kinase [Enterococcus faecium TX0133a01] gi|313592689|gb|EFR71534.1| thymidylate kinase [Enterococcus faecium TX0133B] gi|313596501|gb|EFR75346.1| thymidylate kinase [Enterococcus faecium TX0133A] gi|313599839|gb|EFR78682.1| thymidylate kinase [Enterococcus faecium TX0133C] gi|313642783|gb|EFS07363.1| thymidylate kinase [Enterococcus faecium TX0133a04] gi|313645026|gb|EFS09606.1| thymidylate kinase [Enterococcus faecium TX0082] Length = 231 Score = 254 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 19 NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 78 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 79 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 138 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R++ +D + + + H++ R +L +A Sbjct: 139 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 194 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R H VD+ SF+ V + + E Sbjct: 195 EENPERIHKVDARKSFEEVLQTSYHTIIE 223 >gi|291517602|emb|CBK71218.1| thymidylate kinase [Bifidobacterium longum subsp. longum F8] Length = 206 Score = 254 bits (651), Expect = 5e-66, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL G Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ + S Sbjct: 62 VDIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++PD T +LD+ + R+++ D E + RQ FLD Sbjct: 122 LSMWATNNLLPDRTYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +A +P+R ++D++ S ++V I + + EL Sbjct: 174 LAAAEPNRFRVIDASQSIEAVWAAIESDIKEL 205 >gi|306829296|ref|ZP_07462486.1| thymidylate kinase [Streptococcus mitis ATCC 6249] gi|304428382|gb|EFM31472.1| thymidylate kinase [Streptococcus mitis ATCC 6249] Length = 212 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 108/212 (50%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRMVKIDASLPLEQVVETTKAVLFDRM 208 >gi|253576904|ref|ZP_04854229.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251843771|gb|EES71794.1| thymidylate kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 216 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 7/217 (3%) Query: 1 MN---SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN GLFI+ EG +G+GKTT + ++R L+ + + TREPGG AE R V+L+ Sbjct: 1 MNHQAKGLFITLEGGDGSGKTTVMREMERLLKEQGVNFISTREPGGIEIAEKIREVILNP 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A EA+++AA+R H+ + P+L G +LCDRFLDSS AYQG + Sbjct: 61 QHTAMDARTEALLYAASRRQHLAEKVEPSLERGITVLCDRFLDSSLAYQGYARGLGIDEV 120 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + + PD T LD+ ++GL R+ ++ + + + H+K R+ + Sbjct: 121 LKINLFATKGRFPDLTFYLDIEPEVGLARIAA----GAGREVNRLDMESLHFHQKVREGY 176 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A P+R +D++ S + VA I ++ +++ Sbjct: 177 QILAGMYPERIKTIDASRSKEEVAAEIRGHLYVAIKE 213 >gi|15805151|ref|NP_293837.1| thymidylate kinase [Deinococcus radiodurans R1] gi|14285522|sp|Q9RY40|KTHY_DEIRA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|6457772|gb|AAF09698.1|AE001873_8 thymidylate kinase [Deinococcus radiodurans R1] Length = 206 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 110/210 (52%), Gaps = 7/210 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG EGAGKTT ++ L+ L+ + V VTREPGGTP R V+L V+ Sbjct: 1 MSQGLFITLEGPEGAGKTTQLARLEARLRAAGHAVTVTREPGGTPLGTRVREVVLDPAVE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++++A+R V V+RPAL G+ +LCDR+ DSS AYQG L + Sbjct: 61 -IEPLGEFLLYSASRAQLVREVLRPALERGETVLCDRYADSSLAYQGAGRGLSLPLLRQI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + P T++LDL +GL+R R D E+ D+ H + RQ FLD+ Sbjct: 120 TAEVTGGLTPGLTVLLDLDPALGLQRAARR------GQPDRLEQADLTFHRRVRQGFLDL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A +P R ++D+ + I V E Sbjct: 174 AHAEPQRFLVLDATRPEDELEAEIWAAVSE 203 >gi|53803739|ref|YP_114428.1| thymidylate kinase [Methylococcus capsulatus str. Bath] gi|59798160|sp|Q606M0|KTHY_METCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53757500|gb|AAU91791.1| thymidylate kinase [Methylococcus capsulatus str. Bath] Length = 208 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 81/216 (37%), Positives = 113/216 (52%), Gaps = 8/216 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T++ + L+ + V TREPGGT EA R + L D Sbjct: 1 MTPGKFITLEGGEGVGKSTNVDFVVSRLRARGLKVVATREPGGTAFGEAVREIFL--RQD 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EAE ++ AAR+ H+ VI PAL G ++CDRF D+SYAYQG +D L Sbjct: 59 TVRPEAELLLLFAARVHHLREVIEPALRRGDWVVCDRFTDASYAYQGAGRGIAPGVIDFL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++LD PVD GLKR R + D ER+D + R+ +L + Sbjct: 119 RDWIQAGLRPDLTLLLDAPVDTGLKRAHQR------SGPDRLEREDSAFFARVREGYLAL 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 AR +P R ++D+ V T I V L+ V Sbjct: 173 ARAEPGRIRVIDADRPLALVQTAIATQVDSLLAGHV 208 >gi|319638548|ref|ZP_07993310.1| thymidylate kinase [Neisseria mucosa C102] gi|317400297|gb|EFV80956.1| thymidylate kinase [Neisseria mucosa C102] Length = 208 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 115/206 (55%), Gaps = 7/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ +GI+GAGK+T+++++K + ++ V TREPGGTPA EA R +LL+ + Sbjct: 2 KPRFITLDGIDGAGKSTNLAVMKAWFEKHKLPVLFTREPGGTPAGEALREILLNPAT-QV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR H+E VI PAL G ++ DRF D+++AYQG + +L+ Sbjct: 61 SLRTETLLMFAARQQHLETVILPALKNGTHVVSDRFTDATFAYQGGGRGVPLQDIATLEH 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++LD+P+++ + R+ + D FE++ + R+++L A Sbjct: 121 WVQGDFRPDLTLLLDVPLEVSMARINQ------TREKDRFEQEAAEFFNRVREVYLQRAA 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 QP+R ++DS S +V T I + Sbjct: 175 KQPERYAVIDSGQSLDAVKTQIETAL 200 >gi|301300450|ref|ZP_07206650.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851947|gb|EFK79631.1| dTMP kinase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 208 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 5/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+G+GKT+ + + L K D TREPGG +EA R ++L+ E Sbjct: 3 GKFITFEGIDGSGKTSVLKGVIEHLNGKKIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + + PAL EGK++LCDRF+DSS YQG + L E Sbjct: 63 DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVIKLNE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + PD T+ D+ +I LKR+ N +D +++ + + K RQ +L +A Sbjct: 123 FATENLKPDLTLYYDVEPEISLKRISNN----RQNQVDRLDKESMDFYHKVRQAYLSLAE 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R ++D++ + V + L+I+ + Sbjct: 179 SNKERIKVIDASQNLDKVIDDTLSILNNFM 208 >gi|320095385|ref|ZP_08027065.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338] gi|319977690|gb|EFW09353.1| thymidylate kinase [Actinomyces sp. oral taxon 178 str. F0338] Length = 256 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 119/208 (57%), Gaps = 9/208 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG++GAGKTT I ++ + + + ++V +T EPGGTP R ++ + G D+ Sbjct: 12 RGVFITFEGVDGAGKTTQIRNVREWFEERGFEVVMTCEPGGTPLGAELRRLVQN-GPDDI 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV V+RPAL G ++L DR++DSS AYQG S + ++ Sbjct: 71 DPRTEALLYAADRAYHVATVVRPALARGAVVLGDRYIDSSLAYQGAARSLGVDEIAAMSA 130 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + P T +LDLP ++G R + D ER+ HE+ R+ +L +A Sbjct: 131 WATEGLSPRTTFLLDLPPEVGAGR--------RTDAPDRMERESADFHERVRREYLRLAD 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +PDR ++D+ + + V + I ++ E Sbjct: 183 AEPDRIVVIDAVGTREEVFSEIRGVLVE 210 >gi|284989206|ref|YP_003407760.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160] gi|284062451|gb|ADB73389.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160] Length = 225 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 113/213 (53%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+FEG EGAGK+T + LL +L + T EPGGTPA A R ++L Sbjct: 18 RGLFIAFEGGEGAGKSTQVRLLCEWLTAQGRPARATFEPGGTPAGAAVRAIVLDRAHTGL 77 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R H V+RPAL G++++ DR++DSS AYQG + + ++ Sbjct: 78 SPRAEALLYAADRAQHAHAVLRPALEAGEVVVTDRYVDSSLAYQGAGRTIGLDDVAAISR 137 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LDLP + GL R A D E + + H++ R F +A Sbjct: 138 WATLGLRPDLTVLLDLPPETGL------ARARGRAAADRLESESLEFHQRVRDTFRTLAA 191 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P R ++D+ +A ++ V L+ +R Sbjct: 192 AEPGRYLVLDATRGVDELAADVRARVGALLGER 224 >gi|81298904|ref|YP_399112.1| thymidylate kinase [Synechococcus elongatus PCC 7942] gi|81167785|gb|ABB56125.1| thymidylate kinase [Synechococcus elongatus PCC 7942] Length = 215 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 106/217 (48%), Gaps = 13/217 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLL 55 MN G FI EGI+G GK+T + L +L + + TREPG T +A R +LL Sbjct: 1 MNFGNFIVLEGIDGCGKSTQLQRLVNWLPHSSLLQPGQVIVATREPGDTALGQALRSLLL 60 Query: 56 --SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 AE +++AA R HVE V+RP L G +++CDR++DS+ AYQG Sbjct: 61 TQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAVVVCDRYVDSTVAYQGYGRGLD 120 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L ++ + D T+ LDLPV I +R Q R D E + E+ Sbjct: 121 QSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQAR------GQGDRMEAAGLAFQERL 174 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 RQ F IA +PDR +D+A VA I +V + Sbjct: 175 RQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVVQQ 211 >gi|158339115|ref|YP_001520292.1| thymidylate kinase [Acaryochloris marina MBIC11017] gi|189028825|sp|B0C3N6|KTHY_ACAM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|158309356|gb|ABW30973.1| thymidylate kinase [Acaryochloris marina MBIC11017] Length = 231 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 115/227 (50%), Gaps = 17/227 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-------------VHVTREPGGTPAAEAA 50 G FI FEG EGAGKTT ++L+ +L + V TREPGGT ++ Sbjct: 3 GKFIVFEGGEGAGKTTQLNLVFEWLTGSGWTNRIKGYIQGDYPSVLTTREPGGTALGKSI 62 Query: 51 RHVLLSC---GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 R +LL G + AE ++FAA R HV + + P L +G ++LCDR+ DS+ AYQG Sbjct: 63 RKLLLDVTATGNESIDERAELLLFAADRAQHVSSCLLPHLQQGALVLCDRYTDSTIAYQG 122 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + L +I+ Q ++ D T LD+ + GL R +R E D E ++ Sbjct: 123 YGRELDLTLIHQLNQIATQGLVSDLTFWLDIDPEFGLARTHDREQDPEIET-DRMEANEI 181 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 H++ RQ F D+AR P+R +++ S VA I I+ +Q+ Sbjct: 182 AFHQRLRQGFADLARQHPERIFRIEAHQSDDVVAQQIQGILESRLQE 228 >gi|121602268|ref|YP_989111.1| thymidylate kinase [Bartonella bacilliformis KC583] gi|120614445|gb|ABM45046.1| thymidylate kinase [Bartonella bacilliformis KC583] Length = 213 Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats. Identities = 93/209 (44%), Positives = 139/209 (66%), Gaps = 2/209 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG GKTT ISLL + + K Y+V +TREPGGT AE R++LLS ++G Sbjct: 2 GYFITFEGGEGVGKTTQISLLAHYFRSKGYEVVITREPGGTAGAEIIRYILLSGSAIQYG 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + EA++F AAR DHV VI+PAL GKI+LCDRF+DS+ YQG + L L+ I Sbjct: 62 SFIEAVLFTAARADHVAEVIKPALQAGKIVLCDRFIDSTRVYQGLNNKVDSYLLSILECI 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + VMP+ T +LD+P ++RV+ R +ES +D+FE+ ++ I E+RRQ FL +A+N Sbjct: 122 GINGVMPNLTFLLDVPAISSMERVKLR--RKESGIIDHFEKDELKIQEQRRQAFLQLAKN 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R ++D+ + + +A I +I +++ Sbjct: 180 EPNRIQVIDATGTVEEIACQIKDICHQVI 208 >gi|309805418|ref|ZP_07699465.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c] gi|312872145|ref|ZP_07732218.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1] gi|329921009|ref|ZP_08277537.1| dTMP kinase [Lactobacillus iners SPIN 1401G] gi|308165236|gb|EFO67472.1| dTMP kinase [Lactobacillus iners LactinV 09V1-c] gi|311092229|gb|EFQ50600.1| dTMP kinase [Lactobacillus iners LEAF 2062A-h1] gi|328935285|gb|EGG31765.1| dTMP kinase [Lactobacillus iners SPIN 1401G] Length = 229 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 18 KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 77 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + + Sbjct: 78 MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 137 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ GL+R+Q E D E+++ + H+K + + Sbjct: 138 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 193 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ S V + + I+ E + Sbjct: 194 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 224 >gi|229552948|ref|ZP_04441673.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1] gi|229313692|gb|EEN79665.1| dTMP kinase [Lactobacillus rhamnosus LMS2-1] Length = 226 Score = 254 bits (650), Expect = 7e-66, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 4/217 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ L L+ + VH+TREPGG +E R V+L Sbjct: 13 TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISEMIRDVILDPKNTA 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL G I++CDRF+DSS AYQG + + Sbjct: 73 MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+PV +GL R+ R+ D +++ + HE+ ++ + Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQY---DRLDQESLAFHERVHAAYMKLV 189 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 + P R VD+ +V T + E + + Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITERFPELFAK 226 >gi|251781863|ref|YP_002996165.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390492|dbj|BAH80951.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 211 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + + L+ + + ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P +IGL R+ ++ ++ + + V +H++ R+ +L Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAAN----KNREVNRLDLEAVDMHQRVREGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ QP+R +D++ + V L + L++ Sbjct: 177 LAQEQPNRIVTIDASKPLEDVVDVALAHILALME 210 >gi|160914736|ref|ZP_02076950.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991] gi|158433276|gb|EDP11565.1| hypothetical protein EUBDOL_00743 [Eubacterium dolichum DSM 3991] Length = 210 Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+FEG +G+GKTT L L+ Y V TREPGG AE RH++L Sbjct: 1 MKKGLFITFEGNDGSGKTTISMLAYESLKAAGYPVIYTREPGGIDIAEQIRHIILDPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AA+R H+ + PAL + +I+LCDRFLDSS AYQG + + Sbjct: 61 AMDGRCEALLYAASRRQHLVEKVLPALEKKQIVLCDRFLDSSLAYQGVARGIGVDEVYGI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ MPD TI LD+ +++GL RV +R + LD +++ + H+ + + + Sbjct: 121 NEFAIEGCMPDATIYLDVSLEVGLARVASRGN------LDRMDQESMDFHQAVAKGYAIV 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R HIV++ + V + L ++ E+VQ Sbjct: 175 REKFAKRMHIVNADQEVEKVLADTLKVLEEIVQ 207 >gi|328478590|gb|EGF48257.1| thymidylate kinase [Lactobacillus rhamnosus MTCC 5462] Length = 226 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 4/217 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ L L+ + VH+TREPGG +E R V+L Sbjct: 13 TGTFITFEGPDGAGKTSVLNTLIPKLKACSVTSVHLTREPGGAKISETIRDVILDPKNTA 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL G I++CDRF+DSS AYQG + + Sbjct: 73 MDARTEALLYAASRRQHLVEVIQPALAHGDIVVCDRFVDSSVAYQGGGRQIGTQAVLQMN 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+PV +GL R+ R+ D +++ + HE+ ++ + Sbjct: 133 QFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQY---DRLDQESLAFHERVHAAYMKLV 189 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 + P R VD+ +V T + E + + Sbjct: 190 ADNPKRIVTVDATQPLAAVVTAAFMTITERFPELFAK 226 >gi|224824708|ref|ZP_03697815.1| dTMP kinase [Lutiella nitroferrum 2002] gi|224603201|gb|EEG09377.1| dTMP kinase [Lutiella nitroferrum 2002] Length = 208 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 7/215 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG++GAGK+T ++ ++ +L + D TREPGGT E R +LL+ + Sbjct: 1 MRRGTFITLEGVDGAGKSTQLAAVRDWLAEQGIDAVFTREPGGTVLGEKLRELLLAVDTE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++ AAR +H+ VI PAL G+ ++ DRF D+++AYQG +++L Sbjct: 61 -VTLETETLLMFAARQEHIARVIEPALAAGRWVVSDRFTDATFAYQGGGRGLPFARIEAL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ Q + PD T++ D+P+D+ +R+ LD FE++ H + R +L Sbjct: 120 EDWVQQGLQPDLTLLFDVPLDVAARRMAG-----GERVLDRFEQEAADFHARVRAAYLQR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A P R +VD+ S + V ++ + + ++R Sbjct: 175 ASANP-RIAVVDANRSPEQVRAEVMRRLDAVRERR 208 >gi|251794049|ref|YP_003008780.1| thymidylate kinase [Paenibacillus sp. JDR-2] gi|247541675|gb|ACS98693.1| thymidylate kinase [Paenibacillus sp. JDR-2] Length = 217 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G+FI+ EG EGAGKTT I L +Q++ V TREPGG P AE R V+L Sbjct: 1 MNKGIFITIEGGEGAGKTTLIEQLAHTMQQRGKTVITTREPGGIPIAEQIRSVILDRNHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA+++AA+R H+ + PAL +G+I++CDRF+DSS AYQG + S+ Sbjct: 61 GMDARTEALLYAASRRQHLVEKVMPALADGQIVICDRFVDSSLAYQGHARGLGMEEVWSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V MP TI +D+ ++GL R++ ++ + + + H+ R+ + + Sbjct: 121 NRFAVDGAMPQLTIYMDIDPEVGLARIRAAGE----REVNRLDLESLAFHQLVREGYQKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 P+R +D+ ++ +V ++ + Sbjct: 177 LEQFPERIVQIDAGNAANAVLEEVILTI 204 >gi|302388610|ref|YP_003824431.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646] gi|302199238|gb|ADL06808.1| thymidylate kinase [Thermosediminibacter oceani DSM 16646] Length = 211 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 106/211 (50%), Gaps = 8/211 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+ EG +GAGKTT + ++L+ K V TREPGGT E R VLL Sbjct: 5 LRKGKFITIEGPDGAGKTTQAEKIVQYLKSKGKRVISTREPGGTALGEQLRKVLLDPEGS 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA R +E ++ PAL EG ++CDRF+DSS AYQG + L Sbjct: 65 PVS-NAEALIYAACRAQLLERMVIPALREGFTVVCDRFVDSSLAYQGWARGIGINRILQL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI+LD+ + L R+ D E + + H+K R+ ++ + Sbjct: 124 NKWVIGSYWPDITILLDVDPAVSLGRL-------VGGRKDRLESEALEFHQKVREGYMKV 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 PDR I+D++ V I+ + + Sbjct: 177 REMFPDRIRIIDASQPADEVFRQIVAELEKA 207 >gi|259501361|ref|ZP_05744263.1| dTMP kinase [Lactobacillus iners DSM 13335] gi|315653112|ref|ZP_07906037.1| thymidylate kinase [Lactobacillus iners ATCC 55195] gi|259167214|gb|EEW51709.1| dTMP kinase [Lactobacillus iners DSM 13335] gi|315489477|gb|EFU79114.1| thymidylate kinase [Lactobacillus iners ATCC 55195] Length = 234 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 23 KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 82 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + + Sbjct: 83 MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 142 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ GL+R+Q E D E+++ + H+K + + Sbjct: 143 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 198 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ S V + + I+ E + Sbjct: 199 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 229 >gi|282889968|ref|ZP_06298503.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281500161|gb|EFB42445.1| hypothetical protein pah_c008o058 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 222 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 111/209 (53%), Gaps = 2/209 (0%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGA 64 FI+FEG EGAGKTT I ++ L++ YDV TREPGG+ R LL Sbjct: 12 FITFEGGEGAGKTTLIQQVEADLKQLGYDVVSTREPGGSSLGNTIRQWLLQQNTKTSISI 71 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F AAR H+E +I P+L +GKI+LCDRF DS+ AYQG + +L + Sbjct: 72 KAELLLFLAARAQHIEELILPSLTKGKIVLCDRFNDSTIAYQGVARGLGLEAVQNLCKFV 131 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQIFLDIARN 183 V+PD TI LD+ +GL R ++ +D E + + HE RQ F + Sbjct: 132 CGNVVPDLTIYLDIDPHVGLTRTRHAAKEDAPMGSIDRIESEKLEFHEHVRQGFFKLIHQ 191 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R H++D++ S + V + + L+ Sbjct: 192 NPSRYHVIDASMSPELVLRDARATIDRLL 220 >gi|254563522|ref|YP_003070617.1| thymidylate kinase [Methylobacterium extorquens DM4] gi|254270800|emb|CAX26805.1| thymidylate kinase [Methylobacterium extorquens DM4] Length = 244 Score = 254 bits (649), Expect = 8e-66, Method: Composition-based stats. Identities = 90/199 (45%), Positives = 125/199 (62%), Gaps = 4/199 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL Sbjct: 7 RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G AEA++FAAAR+DH+EN+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 67 YGPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++++ PD T+ILDLP + GL R + R + D FE + + HE+ R F IA Sbjct: 127 RVTLEDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRAAFRSIA 183 Query: 182 RNQPDRCHIVDSAHSFQSV 200 +P+RC ++D+ +V Sbjct: 184 EAEPERCRVIDADLGPDAV 202 >gi|87122703|ref|ZP_01078578.1| Thymidylate kinase [Marinomonas sp. MED121] gi|86162000|gb|EAQ63290.1| Thymidylate kinase [Marinomonas sp. MED121] Length = 208 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 118/211 (55%), Gaps = 7/211 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG+GK+T I +K +L+ +N + +TREPGGTP AE R+++LS + Sbjct: 1 MIKGKFITLEGGEGSGKSTCIKYIKAWLESQNIEYIITREPGGTPLAEEIRNMILSHREE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E E ++ AAR H++ I+PA+ GK ++ DRF+DSSY YQG +D L Sbjct: 61 KIHDETELLLMFAARTQHIKEKIKPAIDAGKWVISDRFVDSSYVYQGAARGGDLKKIDQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +Q PD T++ D+PVDIGL RV+ R D + + V+ H+ R FL Sbjct: 121 AEWVLQGCKPDKTLLFDVPVDIGLSRVEKRAQS------DRLDDEPVVFHQMVRDAFLAR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + ++D++ ++V + + +L Sbjct: 175 -EKTSNHYCLIDASQPIENVNLAVKQELEKL 204 >gi|163738563|ref|ZP_02145977.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107] gi|161387891|gb|EDQ12246.1| Thymidylate kinase [Phaeobacter gallaeciensis BS107] Length = 229 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 115/209 (55%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEGI+G+GK+T LL LQ + +V +TREPGG+ AE R ++L D + Sbjct: 18 GLFVTFEGIDGSGKSTQCRLLAEALQAQGIEVVLTREPGGSDGAEEIRRLVLEGDPDRWS 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L + Sbjct: 78 AETELLLFTAARRDHMERRILPALAAGKVVVCDRFADSTRMYQGLSRGDLRASVDQLHAL 137 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TI++D+ GL R + R E FE + + ++ R FL +A Sbjct: 138 MIGH-EPDLTILIDMNPSKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALAEE 191 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR ++D + VA ++L +V + Sbjct: 192 FADRFRVIDGDRPIELVAQDVLGVVSTAL 220 >gi|222152616|ref|YP_002561791.1| thymidylate kinase [Streptococcus uberis 0140J] gi|254808308|sp|B9DTV7|KTHY_STRU0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|222113427|emb|CAR41106.1| thymidylate kinase [Streptococcus uberis 0140J] Length = 211 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 115/211 (54%), Gaps = 5/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+ EG +GAGKT+ + L L++ N + TREPGG +E+ R+++L Sbjct: 1 MTKGKIITLEGPDGAGKTSVLEQLVLKLEKDNEQSIVTTREPGGVAISESIRNIILDVNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + E +++ AAR H+ + P+L GK++ DRF+DSS AYQGE ++ Sbjct: 61 TEMDFKTELLLYIAARRQHLVEKVLPSLSAGKLVFIDRFIDSSVAYQGEGRGLNKSDIEW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + + PD T++ D+P +IG+ R+ + ++ + + + +H+K RQ +L+ Sbjct: 121 LNDFATDGIKPDLTLLFDVPSEIGIARINQNVN----REINRLDLEKLEMHQKVRQGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A+ PDR ++D++ V ++ E Sbjct: 177 LAKANPDRIVLIDASKPLDDVVDEAYRVIKE 207 >gi|46576522|sp|Q83E35|KTHY_COXBU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 227 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 8/221 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGIEG GKTT ++ ++ L VTREPGGTP AEA R VLLS + Sbjct: 9 RGRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMM 68 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 69 CPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAG 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L +A Sbjct: 129 WVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALAN 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++ + +V I+ + L+ SPL +K Sbjct: 183 QEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 221 >gi|322411208|gb|EFY02116.1| thymidylate kinase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 211 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + + L+ + + ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+P +IGL R+ ++ ++ + + V +H++ R+ +L Sbjct: 121 LNRFATDGLEPDLTLYFDVPSEIGLARIAAN----KNREVNRLDLEAVDMHQRVREGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ QP+R +D++ + V L + L++ Sbjct: 177 LAQEQPNRIVTIDASKPLEDVVGVALAHILALME 210 >gi|293374639|ref|ZP_06620954.1| dTMP kinase [Turicibacter sanguinis PC909] gi|292646729|gb|EFF64724.1| dTMP kinase [Turicibacter sanguinis PC909] Length = 222 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 109/214 (50%), Gaps = 4/214 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG FI+ EG EGAGKTT + L + L + TREPGG AE R V+L Sbjct: 13 MMSGFFITLEGGEGAGKTTIANELIQKLSELGIETLYTREPGGIKIAEQIREVILDRENT 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + EA+++AAAR H+ ++PA+ GKI+LCDRF+DSS YQG + + Sbjct: 73 EMDSRTEALLYAAARRQHLVEKVKPAMDAGKIVLCDRFVDSSIVYQGYARGIGMDEVREI 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ MPD TI D+ + GL R+ ++ + + + H+ + + Sbjct: 133 NQFAIEGFMPDMTIFFDIKPEDGLARIAANS----GREVNRLDLEGLEFHQLVYEGYKIQ 188 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A +R VD+ S Q+V I ++ E + K Sbjct: 189 ANLFSERIVTVDATQSIQAVTNEICQLILEKLGK 222 >gi|320010005|gb|ADW04855.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331] Length = 1036 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F+ EG +GAGK+T + + +++ K ++V VTREPG TP + R +LL Sbjct: 506 NGFFLVLEGGDGAGKSTQVEAIAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLAPTEIARISR 625 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ +R + D E + H++ R FL +A Sbjct: 626 WATSGLVPHLTVLLDVDPQTARERF--------TEAPDRLESEPAEFHDRVRSGFLTLAA 677 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+ +++ T + + + L+ Sbjct: 678 ADPARYLVVDAGQEAEAITTVVRHRLDRLL 707 >gi|319407218|emb|CBI80857.1| Thymidylate kinase [Bartonella sp. 1-1C] Length = 213 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 137/210 (65%), Gaps = 2/210 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT AEA R++LLS V ++ Sbjct: 2 SGYFITFEGGEGVGKTTQISLLSQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E +F AAR DHV +I P+L GKI+LCDRF+DS+ YQG + L+ Sbjct: 62 GPFIETFLFTAARADHVSEIIIPSLQAGKIVLCDRFIDSTRVYQGINNKVDAHIFSILEH 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ + PD T +LD+P +G++RV R E +DYFE+ D+ I E+RRQ FL++A+ Sbjct: 122 IGMKGIKPDLTFLLDIPTKLGIERVNLRRKRIEK--IDYFEKDDLAIQEQRRQAFLELAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++P R ++D + + +A I +I +L+ Sbjct: 180 HEPHRFQVIDGTCAVEVIADQIKDICHQLL 209 >gi|70729185|ref|YP_258921.1| thymidylate kinase [Pseudomonas fluorescens Pf-5] gi|123656957|sp|Q4KFR2|KTHY_PSEF5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|68343484|gb|AAY91090.1| thymidylate kinase [Pseudomonas fluorescens Pf-5] Length = 210 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 123/212 (58%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ +V +TREPGGTP AE R VLL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAERLRAAGIEVLLTREPGGTPLAERIRDVLLTPVEEVM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G ++LCDRF DS+YAYQG + +L++ Sbjct: 62 NADTELLLVFAARAQHLATVIRPALERGAVVLCDRFTDSTYAYQGAGRGLSLARIAALED 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 E+ PD T++ DLPVD+GL R R LD FE++ +K R+ FL A Sbjct: 122 FVQGELRPDLTLVFDLPVDVGLARASAR------GRLDRFEQEGQAFFQKVREAFLARAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R +VD+A V ++ +++ +L+++ Sbjct: 176 AAPQRYVLVDAAQPLAQVQQSLDSLLPQLLER 207 >gi|283853941|ref|ZP_06371146.1| thymidylate kinase [Desulfovibrio sp. FW1012B] gi|283570672|gb|EFC18727.1| thymidylate kinase [Desulfovibrio sp. FW1012B] Length = 211 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 1/209 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEG+GK+T I LL L+R V VTREPGG + R +LLS + Sbjct: 1 MFITLEGIEGSGKSTQIGLLTTALERTGRTVRVTREPGGCGLGQTLRAILLSLETRNLDS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A R HV VIRPAL G+++LCDRF DS+ AYQG S L L +++ Sbjct: 61 RAELFLYLADRAQHVAEVIRPALAAGQVVLCDRFADSTIAYQGYGRSLDVALLQQLNDVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V P T++LD+ + GL+R R + + FE + + H + R + +A Sbjct: 121 VAGTWPQLTLLLDIDPEQGLRRALARNLQAGTTAAEGRFEAEHLDFHGRVRDGYRTLASL 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R VD+ +VA + ++V + + Sbjct: 181 HPRRFVTVDATPDAATVAARVWDVVSQRL 209 >gi|313124284|ref|YP_004034543.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280847|gb|ADQ61566.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|325685698|gb|EGD27777.1| thymidylate kinase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 212 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 113/208 (54%), Gaps = 5/208 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG +GAGKTT I+ + + +Q + ++ VTREPGG+ AE R ++L E Sbjct: 2 QGYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AA+R HV +I PAL G +++ DRF+DSS AYQG+ + + Sbjct: 62 MNAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQGRGLGIDEVAQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL GL R+ S D E++ ++ HE+ + + + Sbjct: 122 AFATGHLEPDLTIFLDLDPAQGLARIAK----VRSGSEDRLEQEKLVFHEEVYRGYQKVN 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 + PDR +VD++ V + +V Sbjct: 178 QAHPDRVKVVDASQDLPQVVAASVKLVK 205 >gi|312864169|ref|ZP_07724403.1| dTMP kinase [Streptococcus vestibularis F0396] gi|322517269|ref|ZP_08070148.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124] gi|311100170|gb|EFQ58379.1| dTMP kinase [Streptococcus vestibularis F0396] gi|322124175|gb|EFX95709.1| thymidylate kinase [Streptococcus vestibularis ATCC 49124] Length = 209 Score = 253 bits (648), Expect = 1e-65, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 110/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKTT + L L+ V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTTVLEALLPRLREAYPAKVVTTREPGGVAIAEQIREVILDVNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L EG +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVERVLPELEEGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GL R+ ++ + + + +H++ RQ +LD Sbjct: 121 LNAYATDGYKPDVTLLFDVDSETGLARIAANGE----REVNRLDLEKLDLHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ +P+R I+D++ +F+ V ++ + Sbjct: 177 LAQAEPERIKIIDASQAFEDVVEEAWKVIKGYL 209 >gi|78188893|ref|YP_379231.1| thymidylate kinase [Chlorobium chlorochromatii CaD3] gi|123579949|sp|Q3AS37|KTHY_CHLCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78171092|gb|ABB28188.1| thymidylate kinase [Chlorobium chlorochromatii CaD3] Length = 222 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 123/223 (55%), Gaps = 6/223 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T ++ L +L++++ + REPGGTP AE+ R +LL Sbjct: 1 MLITFEGIDGAGKSTQVAKLVAYLKQQSTPLLSLREPGGTPTAESIRSLLLDNR-KSITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F+A+R + VE +IRPAL EGK ++ DRF DS+ AYQG L S+ +S Sbjct: 60 IAELLLFSASRAELVETLIRPALAEGKTVILDRFFDSTTAYQGHGRGISLEQLHSIIALS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKRRQIFLD 179 +++PD T LDL + L+R +R L +S D E+ + + K R +L Sbjct: 120 TGDLLPDVTFYLDLEPEEALRRAFSRSGLPLDFAAQSNESDRMEQAGIAFYHKVRNGYLT 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 + + P R +D+ ++ +I+ V ++ +SPL + Sbjct: 180 LMQQHPSRFVALDATQPPDTLHQHIIAEVETRLKLHISPLVAP 222 >gi|315612950|ref|ZP_07887861.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296] gi|315315060|gb|EFU63101.1| thymidylate kinase [Streptococcus sanguinis ATCC 49296] Length = 212 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 108/212 (50%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ++ + + + +H+K R+ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDMEGLDLHKKVRKGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRMVKIDASLPLEQVVDATKAVLFDRM 208 >gi|161831009|ref|YP_001596429.1| thymidylate kinase [Coxiella burnetii RSA 331] gi|164686003|ref|ZP_01946518.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177'] gi|165919105|ref|ZP_02219191.1| thymidylate kinase [Coxiella burnetii RSA 334] gi|161762876|gb|ABX78518.1| thymidylate kinase [Coxiella burnetii RSA 331] gi|164601531|gb|EAX32890.2| thymidylate kinase [Coxiella burnetii 'MSU Goat Q177'] gi|165917174|gb|EDR35778.1| thymidylate kinase [Coxiella burnetii RSA 334] Length = 223 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 8/221 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGIEG GKTT ++ ++ L VTREPGGTP AEA R VLLS + Sbjct: 5 RGRFISFEGIEGVGKTTALNWVREQLDAARIPYVVTREPGGTPIAEAIRDVLLSHSDEMM 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 65 CPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAG 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L +A Sbjct: 125 WVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALAN 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++ + +V I+ + L+ SPL +K Sbjct: 179 QEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217 >gi|282863636|ref|ZP_06272694.1| thymidylate kinase [Streptomyces sp. ACTE] gi|282561337|gb|EFB66881.1| thymidylate kinase [Streptomyces sp. ACTE] Length = 1023 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EG +GAGK+T + L +++ K ++V VTREPG TP + R +LL Sbjct: 506 TGFFLAVEGGDGAGKSTQVEALAEWIRAKGHEVVVTREPGATPIGKRLRSILLDVSSAGL 565 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R +HV++V+RPAL G I++ DR++DSS AYQG + + Sbjct: 566 SNRAEALLYAADRAEHVDSVVRPALERGAIVISDRYIDSSVAYQGAGRDLSPTEIARISR 625 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P T++LD+ + +R + D E + H + R FL +A Sbjct: 626 WATSGLVPHLTVLLDVDPETARERF--------TEAPDRLESEPPEFHNRVRSGFLTLAA 677 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+A +++ T + + + L+ Sbjct: 678 AAPLRYLVVDAAQEPEAITTVVRHRLDHLL 707 >gi|170017863|ref|YP_001728782.1| thymidylate kinase [Leuconostoc citreum KM20] gi|238688934|sp|B1MVT4|KTHY_LEUCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169804720|gb|ACA83338.1| Thymidylate kinase [Leuconostoc citreum KM20] Length = 214 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 5/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M LFI+FEG EGAGKT+ + L L+ + TREPGG P +EA R +L Sbjct: 1 MTRPLFITFEGPEGAGKTSVLEALVSELKPILGDQLVTTREPGGNPISEAIRQILQPEDD 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA+++AAAR H+ I PAL GK+L+ DR++DSS AYQG + Sbjct: 61 NGMDDRTEALLYAAARRQHIVETILPALSAGKVLISDRYVDSSLAYQGGGRDLGVDNIWQ 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ ++PD TI D+P ++GL RV +D +++ + H++ R +L+ Sbjct: 121 INQFAIDGLLPDLTIYFDVPSELGLSRVMAN----RQGKIDRLDKESLSFHQRVRTTYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + DR I+D+ V ++ ++ E + R Sbjct: 177 LQHDFSDRIKIIDATQPLTDVISDTRALLQEALNSR 212 >gi|284050175|ref|ZP_06380385.1| thymidylate kinase [Arthrospira platensis str. Paraca] gi|291571445|dbj|BAI93717.1| thymidylate kinase [Arthrospira platensis NIES-39] Length = 231 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 112/223 (50%), Gaps = 19/223 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50 +G I FEGIEG GKTT I ++ +L + V VTREPGGT + Sbjct: 2 AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSPGGKLHQPGVQVTREPGGTQLGQHL 61 Query: 51 RHVLLSCG-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 R +LL + +E +++AA R H+E +I+P L +G ++LCDRF DS+ AYQG Sbjct: 62 RDLLLHHEINEPLSDRSELLLYAADRAQHIETLIKPLLDQGTMILCDRFTDSTLAYQGYG 121 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + +I+ ++PD T+ L++PV+ GL R++ R D E+ D+ Sbjct: 122 RGLDLQQIHQINQIATGGLVPDLTLWLNVPVEAGLTRIKARKKA------DRIEQADLEF 175 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 H + + F +A+ P R +D V I NI+ + + Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKL 218 >gi|209527775|ref|ZP_03276269.1| dTMP kinase [Arthrospira maxima CS-328] gi|209491808|gb|EDZ92169.1| dTMP kinase [Arthrospira maxima CS-328] Length = 231 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 19/223 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK------------NYDVHVTREPGGTPAAEAA 50 +G I FEGIEG GKTT I ++ +L + V VTREPGGT + Sbjct: 2 AGKLIVFEGIEGCGKTTQIQQIQPWLADRLSLNHSSGGKLHQRGVQVTREPGGTQLGQHL 61 Query: 51 RHVLLSCGV-DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 R +LL + + +E +++AA R H+E +I+P L +G I+LCDRF DS+ AYQG Sbjct: 62 RDLLLHHDIREPLSDRSELLLYAADRAQHIETLIKPLLDQGTIILCDRFTDSTLAYQGYG 121 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + +I+ V+PD T+ L++PV+ GL R++ R + D E+ D+ Sbjct: 122 RGLDLQQIHQINQIATGGVVPDLTLWLNVPVEAGLTRIKARKKV------DRIEQADLEF 175 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 H + + F +A+ P R +D V I NI+ + + Sbjct: 176 HYRVAEGFATLAKMYPQRIVPIDGNGDRDRVTQQIQNILNQKL 218 >gi|90962199|ref|YP_536115.1| thymidylate kinase [Lactobacillus salivarius UCC118] gi|227891204|ref|ZP_04009009.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741] gi|122448751|sp|Q1WSU7|KTHY_LACS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|90821393|gb|ABE00032.1| Thymidylate kinase [Lactobacillus salivarius UCC118] gi|227867078|gb|EEJ74499.1| thymidylate kinase [Lactobacillus salivarius ATCC 11741] Length = 208 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 5/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+G+GKT+ + + L K D TREPGG +EA R ++L+ E Sbjct: 3 GKFITFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + + PAL EGK++LCDRF+DSS YQG + L E Sbjct: 63 DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVIKLNE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + PD T+ D+ +I LKR+ N +D +++ + + K RQ +L +A Sbjct: 123 FATENLKPDLTLYYDVEPEISLKRISNN----RQNQVDRLDKESMDFYHKVRQAYLSLAE 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R ++D++ + V + L+I+ + Sbjct: 179 SNKERIKVIDASQNLDKVIDDTLSILNNFM 208 >gi|225867971|ref|YP_002743919.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus] gi|259494281|sp|C0MGT8|KTHY_STRS7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225701247|emb|CAW98209.1| thymidylate kinase [Streptococcus equi subsp. zooepidemicus] Length = 211 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 5/202 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+FEG +GAGKTT + L LQ + TREPGG AE R ++L Sbjct: 1 MTRGKLITFEGPDGAGKTTVLERLVPLLQAALGQTIVTTREPGGVAIAEKIRQLILDVSH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I PAL G ++L DRF+DSS AYQG + Sbjct: 61 TTMDDKTELLLYIAARRQHLVEKIMPALEAGHLVLVDRFIDSSVAYQGAGRGLDKQAIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + V PD T+ D+P ++GL R+ ++ + + + +H++ R+ +L+ Sbjct: 121 LNHFATDGVDPDLTLYFDVPSELGLARIAQNTE----REVNRLDLEQLDLHQRVRKGYLE 176 Query: 180 IARNQPDRCHIVDSAHSFQSVA 201 +A P R +D++ +SV Sbjct: 177 LALENPQRIVKIDASQDLESVV 198 >gi|322392107|ref|ZP_08065569.1| thymidylate kinase [Streptococcus peroris ATCC 700780] gi|321145007|gb|EFX40406.1| thymidylate kinase [Streptococcus peroris ATCC 700780] Length = 212 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + + L+ KN +V TREPGG E R V+L Sbjct: 1 MSKGFLVSIEGPEGAGKTSVLEAILPVLEEKNIEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL+R+ + ++ + + + +H K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAANSN----REVNRLDLEGLDLHRKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ V N ++++ + Sbjct: 177 LEKEGERIVKIDASLPLDQVVENTKQVLFDRM 208 >gi|313668856|ref|YP_004049140.1| thymidylate kinase [Neisseria lactamica ST-640] gi|313006318|emb|CBN87781.1| putative thymidylate kinase [Neisseria lactamica 020-06] Length = 208 Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPATKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P ++ + R+ + D FE+++ ++ RQ++L A QP Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ------TREKDRFEQEEAGFFKRVRQVYLQRAGRQP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D + S ++V I Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196 >gi|269925799|ref|YP_003322422.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798] gi|269789459|gb|ACZ41600.1| thymidylate kinase [Thermobaculum terrenum ATCC BAA-798] Length = 216 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 118/213 (55%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG+GKTT +L L+ V +TREPGGT E R +LL + Sbjct: 1 MFITFEGPEGSGKTTQARMLATALETLQCKVVLTREPGGTLVGEEIRKILLGPLGKDLDP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + ++F+AAR V ++I+PA+ GKI++CDR+ DS+ AYQ D ++ ++ Sbjct: 61 KCILLLFSAARAQLVRHIIKPAIDSGKIVICDRYADSTRAYQWGGDGIPRDEVERAIQLG 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD T LDL + GL+R + + + + + +++ H++ R+ +L +A+ Sbjct: 121 TEGLEPDITFYLDLSPEEGLRRRRTDSARGAESGWNSMDARELEFHQRVREAYLSLAKEY 180 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +++D+A + + I+ IV + +Q R+ Sbjct: 181 SSRFYVIDAAGRIEDIHRTIIEIVNKKLQSRIG 213 >gi|295094265|emb|CBK83356.1| thymidylate kinase [Coprococcus sp. ART55/1] Length = 207 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+ EG +GAGKTT LLK +L++K YDV +TR+PGG P +EA R V+L+ E Sbjct: 2 RGIFITIEGPDGAGKTTQRELLKEYLEKKGYDVLITRDPGGNPISEAIREVILNKDFTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E +++A+AR V+ I+PAL G+ ++ DRF+DSS YQG + + E Sbjct: 62 GYMTELLLYASARAQLVKENIKPALDAGQAVIADRFVDSSAVYQGIGRGLGVDTVYKVNE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++Q +MPD T ++DL G+ R +N A LD E + + H+K + +A Sbjct: 122 FALQGIMPDMTFLMDLDAQEGISRKKN------QAELDRMENEKMEFHQKVVDGYRMLAD 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +D+ + I+ V + + Sbjct: 176 MHTERIVKIDATLPIDEIHGIIVGYVEKKLN 206 >gi|281356872|ref|ZP_06243362.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548] gi|281316430|gb|EFB00454.1| thymidylate kinase [Victivallis vadensis ATCC BAA-548] Length = 219 Score = 253 bits (647), Expect = 2e-65, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 3/213 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVD 60 + G I+FEG EGAGK+T + LL +L+ K ++V TREPGGTP AE R V+ + G + Sbjct: 9 HPGRLITFEGPEGAGKSTQLKLLAGYLEEKGFEVIATREPGGTPLAERLRAVIKAFEGEE 68 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR HV VIRPAL GKI+LCDR+ DS+ AYQG +D+L Sbjct: 69 KLHNTTELLLIEAARSQHVREVIRPALAAGKIVLCDRYFDSTTAYQGGARGFDAEAIDAL 128 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ E PD T++ DL + G R + R D FE + + H + R+ +L I Sbjct: 129 NDLAIAECAPDLTLLFDLTPEAGFARTRTRTET--QGEHDRFEEEKLEFHRQVRESYLTI 186 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A +P+R +V + Q + T + +V EL++ Sbjct: 187 AAREPERVRVVAADRPAQEIQTEVRKLVDELIR 219 >gi|289167781|ref|YP_003446050.1| thymidylate kinase [Streptococcus mitis B6] gi|288907348|emb|CBJ22185.1| thymidylate kinase [Streptococcus mitis B6] Length = 212 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSLAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LEKEGNRIVKIDASFPLEQVVETTKAVLFDRM 208 >gi|268318943|ref|YP_003292599.1| hypothetical protein FI9785_450 [Lactobacillus johnsonii FI9785] gi|262397318|emb|CAX66332.1| tmk [Lactobacillus johnsonii FI9785] Length = 213 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ + + L + + VTREPGG+ +E R ++L E Sbjct: 2 RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG + + + Sbjct: 62 MDDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQGVGRNLGIEEVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL +GL R++ + D E++ + H K + ++ Sbjct: 122 DFGTGGLEPDLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR VD+ + VA N + I+ + + Sbjct: 178 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 208 >gi|104774437|ref|YP_619417.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514536|ref|YP_813442.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122274732|sp|Q048W8|KTHY_LACDB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123378380|sp|Q1G923|KTHY_LACDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|103423518|emb|CAI98420.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116093851|gb|ABJ59004.1| thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126247|gb|ADY85577.1| Thymidylate kinase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 212 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 5/208 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG +GAGKTT I+ + + +Q + ++ VTREPGG+ AE R ++L E Sbjct: 2 QGYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AA+R HV +I PAL G +++ DRF+DSS AYQG+ + + Sbjct: 62 MNAKTEALLYAASRSQHVSEIINPALKRGDLVMSDRFVDSSLAYQGQGRGLGIDEVAQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL GL R+ S D E++ + HE+ + + + Sbjct: 122 AFATGHLEPDLTIFLDLDPAQGLARIAK----VRSGSEDRLEQEKLAFHEEVYRGYQKVN 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 + PDR +VD++ V + +V Sbjct: 178 QAHPDRVKVVDASQDLPQVVAASVKLVK 205 >gi|320526760|ref|ZP_08027950.1| thymidylate kinase [Solobacterium moorei F0204] gi|320132728|gb|EFW25268.1| thymidylate kinase [Solobacterium moorei F0204] Length = 211 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+FEG +G+GKTT + + L+ Y V TREPGG+ AE RHV+L Sbjct: 1 MKTGLFITFEGPDGSGKTTVSTAVTNMLEADGYQVRYTREPGGSNIAEQIRHVILDPKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A EA+++AA+R H+ + + P L +G ++ DRF+DSS AYQG + + Sbjct: 61 EMDARTEALLYAASRRQHLIDKVLPVLEQGVHVISDRFVDSSLAYQGCGREIGMDEVYEI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ MPD TI L + + GLKR+ LD +++ V H++ + + + Sbjct: 121 NQFAIENHMPDKTIFLQIDAETGLKRIHK-----GREVLDRLDQESVEFHQRVHEGYQKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 DR IVD+ +V IV L+ + Sbjct: 176 IEKYADRMIIVDATADVDTVIQKSYEIVKGLLDAQ 210 >gi|154706615|ref|YP_001424915.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111] gi|154355901|gb|ABS77363.1| thymidylate kinase [Coxiella burnetii Dugway 5J108-111] Length = 223 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 8/221 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGIEG GKTT ++ ++ L VTREPGGTP AEA R VLLS + Sbjct: 5 RGRFISFEGIEGVGKTTALNWVREQLDATRIPYVVTREPGGTPIAEAIRDVLLSHSDEMM 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 65 CPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEELAG 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L +A Sbjct: 125 WVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLALAN 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +P R ++ + +V I+ + L+ SPL +K Sbjct: 179 QEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 217 >gi|138893702|ref|YP_001124155.1| thymidylate kinase [Geobacillus thermodenitrificans NG80-2] gi|196250745|ref|ZP_03149432.1| dTMP kinase [Geobacillus sp. G11MC16] gi|166221745|sp|A4IJA6|KTHY_GEOTN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|134265215|gb|ABO65410.1| Thymidylate kinase [Geobacillus thermodenitrificans NG80-2] gi|196209695|gb|EDY04467.1| dTMP kinase [Geobacillus sp. G11MC16] Length = 225 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 117/211 (55%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F SFEG EGAGKTT I L+ FL+ + +DV VTREPGG AEA R ++L+ E Sbjct: 2 NGYFFSFEGPEGAGKTTMIGKLESFLRERGFDVMVTREPGGVRIAEAIRALILNREYTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ I PAL G+++LCDRF+DSS AYQG + + E Sbjct: 62 DGRTEALLYAAARRQHLLEKIVPALEAGRVVLCDRFVDSSLAYQGFARGLGVEEVWKINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ MP T+ D+ IGL+R++ ++ + + + H+K R+ + +A+ Sbjct: 122 FAIDGYMPSLTVYFDIDPQIGLERIRQNRE----REVNRLDLETLSFHDKVREGYRKLAK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R ++D++ V + + V ++ Sbjct: 178 RFAERIVVIDASRPLDDVFSETVATVLSRLE 208 >gi|147676397|ref|YP_001210612.1| thymidylate kinase [Pelotomaculum thermopropionicum SI] gi|189030835|sp|A5D690|KTHY_PELTS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146272494|dbj|BAF58243.1| thymidylate kinase [Pelotomaculum thermopropionicum SI] Length = 216 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 77/210 (36%), Positives = 112/210 (53%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG++G+GKTT I LL L+ V TREPGGT E R +LL+ E Sbjct: 2 KGKFIVFEGVDGSGKTTQIKLLGEKLESMGCPVVYTREPGGTRVGERIREILLNPLYGEL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AAAR HV VI PAL EGK++LCDRF DSS AYQG L+ + Sbjct: 62 VPWAEALLYAAARAQHVAQVILPALREGKVVLCDRFTDSSLAYQGYGRGVDIEMLEQVNR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+PD ++LD + +R+ R D ER+ + + R +L +A Sbjct: 122 PAAAGVVPDLVLVLDFDREGQTERMA-----RSGRSADRIEREAQEFYRRVRSGYLALAA 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D++ + + V ++L E++ Sbjct: 177 RAPRRYRVIDASRAEKLVHLDVLKAAEEVL 206 >gi|304315605|ref|YP_003850750.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777107|gb|ADL67666.1| thymidylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 205 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+FEGI+G+GKTT I+LLK +L D+ V REPGGT E R++LL Sbjct: 1 MYKGKLITFEGIDGSGKTTQINLLKEYLLNIGRDIVVLREPGGTSVGEKIRNILLDKKN- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AEA+++AA+R + V+ VI P+L GKI++ DRF+DSS YQG ++ + Sbjct: 60 KIVPTAEALLYAASRAELVKEVIIPSLNNGKIVILDRFVDSSIVYQGYARGIGVKAVEEI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I++ ++PD TI LD+ +KR+ R D E +D+ HEK + + + Sbjct: 120 NNIAIAGLVPDLTIYLDIKPKDTIKRIDRRKDK------DRLEMEDLEFHEKVYEGYKQL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++PDR ++D+ H + +I+ + +++ Sbjct: 174 IKSRPDRYLVIDATHDIDYIQKSIVKEISKII 205 >gi|218283200|ref|ZP_03489270.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989] gi|218216018|gb|EEC89556.1| hypothetical protein EUBIFOR_01858 [Eubacterium biforme DSM 3989] Length = 212 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 6/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+FEG +G+GKTT ++ L + YD TREPGG+ AE+ R++LL Sbjct: 3 MKQGVFITFEGNDGSGKTTVCKAVQEELIKMGYDCIYTREPGGSKIAESIRNILLDVNNT 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R H++ V+ PAL KI+LCDRF+DSS AYQG + + Sbjct: 63 EMDDRTEALLYAASRRQHLKEVVLPALENKKIVLCDRFIDSSLAYQGIARGIGLKEVWDI 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ MP+ T+ L + V+ G KR+ R L+ ++++ H+ RQ + + Sbjct: 123 NQFAIDGCMPEKTLFLSVSVETGKKRMNLRGD------LNRLDQEESSFHKAVRQGYETL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R ++D+ + V + + V +++++ Sbjct: 177 VSMYPERIEVIDAEPCKEEVLKSAMECVLKVIKEH 211 >gi|227888765|ref|ZP_04006570.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200] gi|227850602|gb|EEJ60688.1| thymidylate kinase [Lactobacillus johnsonii ATCC 33200] Length = 217 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ + + L + + +TREPGG+ +E R ++L E Sbjct: 6 RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLITREPGGSKISENIRTIILDPENKE 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG + + + Sbjct: 66 MDDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQGVGRNLGIEEVKQIN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL +GL R++ + D E++ + H K + ++ Sbjct: 126 DFGTGGLEPDLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELL 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR VD+ + VA N + I+ + + Sbjct: 182 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 212 >gi|126739768|ref|ZP_01755459.1| thymidylate kinase [Roseobacter sp. SK209-2-6] gi|126719000|gb|EBA15711.1| thymidylate kinase [Roseobacter sp. SK209-2-6] Length = 221 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 6/212 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEGI+G+GK+T LL L+ +V +TREPGG+P AE R ++L D++ Sbjct: 11 GLFLTFEGIDGSGKSTQCKLLAEALRFAGKEVVLTREPGGSPGAEEIRRIVLEGDPDKWS 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L ++ Sbjct: 71 AETEILLFTAARRDHLERTILPALKAGKVVICDRFADSTRMYQGLSRGDLRQTVDQLHDL 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +Q PD T+++D+ + GL R + R E FE + + ++ R FL +A+ Sbjct: 131 MIQR-EPDLTLLIDMDPETGLSRAKGRQGREE-----RFEDFGLGLQQQMRAGFLSLAQE 184 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R ++D VA +L + + + R Sbjct: 185 FNKRFRVIDGTQPIDKVAAKVLAVAQDELSIR 216 >gi|291455870|ref|ZP_06595260.1| dTMP kinase [Bifidobacterium breve DSM 20213] gi|291382279|gb|EFE89797.1| dTMP kinase [Bifidobacterium breve DSM 20213] Length = 206 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 115/212 (54%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 SGLF+SFEG++G GKTT + L+ +L+ + V VTREPGGT +A R +LL G Sbjct: 2 SGLFVSFEGVDGVGKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAVRQLLLHGVNEGA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV IRPAL G++++ DR+LDSS AYQ + S Sbjct: 62 ADIAPRAEALLFAADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTSEEIRS 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++PD T +LD+ + R+++ D E + RQ FLD Sbjct: 122 LSMWATNNLLPDRTYLLDMDPTLSHNRLEH--------AEDRMESAGDDFQSRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +A +P+R ++D++ S + V I + EL Sbjct: 174 LAAVEPNRFRVIDASQSIEQVWAAIEADIKEL 205 >gi|256822417|ref|YP_003146380.1| thymidylate kinase [Kangiella koreensis DSM 16069] gi|256795956|gb|ACV26612.1| thymidylate kinase [Kangiella koreensis DSM 16069] Length = 216 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 86/216 (39%), Positives = 129/216 (59%), Gaps = 6/216 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+ EG EG GK+T+I+ +K + + KN + TREPGGTP AE R +LLS ++ Sbjct: 5 SRGKFITIEGTEGVGKSTNIAFIKAWFEAKNISLLHTREPGGTPFAEEIRELLLSQREEQ 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A++E ++ AAR HV I+PAL + + +LCDRF D+S+AYQG + L L Sbjct: 65 VDAKSELLLMYAARAQHVSQKIKPALEQRQWVLCDRFSDASFAYQGAGRALGLNKLSELD 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ PD TI+LDLPV++GL R Q R +D FE + V E+ RQ +L IA Sbjct: 125 QWVLEGFKPDLTILLDLPVEVGLSRAQER------GPIDRFEEEKVEFFEQVRQGYLQIA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +P+R IVD+ S + V I ++ Q++V+ Sbjct: 179 QQEPERMKIVDARGSLEKVQQQIEQVLIHFYQQQVT 214 >gi|39935842|ref|NP_948118.1| thymidylate kinase [Rhodopseudomonas palustris CGA009] gi|81562489|sp|Q6N643|KTHY_RHOPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|39649696|emb|CAE28217.1| thymidylate kinase [Rhodopseudomonas palustris CGA009] Length = 230 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 131/211 (62%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T I LL + L++ VTREPGG+P AEA R LL+ Sbjct: 12 RGRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLAGIGKLI 71 Query: 63 G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G A+AEA++FAAAR DHV +I PAL G+ +LCDRF DS+ AYQG+ + L++LQ Sbjct: 72 GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ ++ PD T+ILD+PV+IGL R R R S D FE + + H R++F IA Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RC ++D+ + VA I V + Sbjct: 189 AQEPERCVLIDANAEPEEVADRIWQAVRLRL 219 >gi|89101171|ref|ZP_01174003.1| thymidylate kinase [Bacillus sp. NRRL B-14911] gi|89084106|gb|EAR63275.1| thymidylate kinase [Bacillus sp. NRRL B-14911] Length = 212 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 114/215 (53%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFI+ EG EGAGKTT I++L L + Y V TREPGG AE R V+L Sbjct: 2 MDKGLFITAEGPEGAGKTTIINMLASGLADEGYKVMQTREPGGIEIAEQIRAVILDTKNT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H+ ++PAL EG I+LCDRF+DSS AYQG + S+ Sbjct: 62 AMDPRTEALLYAAARRQHLAEKVQPALDEGYIVLCDRFIDSSLAYQGYARGLGIDEVYSI 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ +MP+ T+ D+ GL+R+ R RE ++ + + + H K R+ + + Sbjct: 122 NHFAIEGMMPELTLYFDIDPASGLQRI-GRNQGRE---VNRLDLESLEFHTKVREGYEIL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 PDR +D++ + V + L + Sbjct: 178 LAKFPDRISRIDASLPVEEVYQLASARLKSLFADK 212 >gi|167042818|gb|ABZ07536.1| putative thymidylate kinase [uncultured marine microorganism HF4000_ANIW137I15] Length = 247 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 114/218 (52%), Gaps = 7/218 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ I+FEGIEG+GKTT SLL L+ + V TREPGGT E R ++L G + Sbjct: 24 AGILITFEGIEGSGKTTQASLLADRLREQGLSVFPTREPGGTHLGEGIRRLVLEPGQEAI 83 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + AAR HV IRPAL GK++LCDRF DS+ YQG ++ + Sbjct: 84 DPVAELFLMEAARAQHVAAKIRPALDAGKVVLCDRFTDSTLVYQGLARGLAWKTIEDVNL 143 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS-------LRESACLDYFERKDVMIHEKRRQ 175 ++ + + P TI+LDL + GL R + R E+ + F+ +D HE R Sbjct: 144 LAAKGIRPHTTILLDLDISAGLARTRTRADSAVQADGSIETGETNRFDLEDREFHEIVRS 203 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 FL +A+ P R +V +A S + V + + + ++ Sbjct: 204 GFLRLAKEDPGRVKVVRAAGSAEEVHEEVWRALEKTLE 241 >gi|172056067|ref|YP_001812527.1| dTMP kinase [Exiguobacterium sibiricum 255-15] gi|229621736|sp|B1YGD3|KTHY_EXIS2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|171988588|gb|ACB59510.1| dTMP kinase [Exiguobacterium sibiricum 255-15] Length = 212 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +GAGKTT + LL L + Y++ +TREPGGT R ++L+ E Sbjct: 2 TGTFITVEGPDGAGKTTQLQLLADRLTAEGYEIVMTREPGGTRIGNEIRSLILNPDFQEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++AA+R HV +IRPAL GKI+LCDRF+D+S AYQG + S+ + Sbjct: 62 DEMTEILLYAASRAQHVNELIRPALAAGKIVLCDRFIDASIAYQGYGLGYTIEQVRSINQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T + DL V +R+ +R LD E++D ++ F+ +A Sbjct: 122 QATNHLTPDRTYLFDLTVSESKQRMMDR------GALDRIEQRDDAFRQRVYDGFMTLAV 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R +VD+ S +S+ T + V ++KR Sbjct: 176 QEPERIQLVDANQSIESLQTELCKDVLTYLKKR 208 >gi|317123732|ref|YP_004097844.1| thymidylate kinase [Intrasporangium calvum DSM 43043] gi|315587820|gb|ADU47117.1| thymidylate kinase [Intrasporangium calvum DSM 43043] Length = 223 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 110/208 (52%), Gaps = 10/208 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF+ FEG +GAGK+T + LL L+R V VTR+PGGTP R ++L D Sbjct: 22 LFVCFEGGDGAGKSTQVRLLAAALERAGRQVLVTRQPGGTPLGAQIRELVLHG--DHVSP 79 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AEA++FAA + HV+ +IRPAL G++++ DR+ DSS AYQG + LQ + Sbjct: 80 RAEALLFAADKAHHVDELIRPALAGGRVVITDRYTDSSIAYQGAGRDLGADEIRQLQHWA 139 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V + PD T++LD+ D+G R D E + H RQ FLD+A + Sbjct: 140 VGGLFPDLTVLLDVSPDVGRSR--------RGEVHDRLESEADDFHAAVRQGFLDLAARE 191 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR +VD+ + +L + ++ Sbjct: 192 PDRYLVVDAGLPADQIHRRVLARLGPIL 219 >gi|309378939|emb|CBX22392.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 208 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 115/199 (57%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPATKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P ++ + R+ D FE+++ ++ RQ++L A QP Sbjct: 124 GGLKPDLTLLLDVPPEVSMARIGQ------MREKDRFEQEEAGFFKRVRQVYLQRAGRQP 177 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D + S ++V I Sbjct: 178 ERYAVIDGSRSPEAVGHQI 196 >gi|304385465|ref|ZP_07367810.1| thymidylate kinase [Pediococcus acidilactici DSM 20284] gi|304328672|gb|EFL95893.1| thymidylate kinase [Pediococcus acidilactici DSM 20284] Length = 209 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 123/214 (57%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN G FISFEG +GAGKTT + + + + D + VTREPGG P +EA R ++L Sbjct: 1 MN-GHFISFEGPDGAGKTTILEAMVEHYRTRLADRLTVTREPGGNPISEAIRAIILDKNN 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E A EA+++AAAR H+ I PAL G+++ CDR++DSS AYQG + Sbjct: 60 TEMDARTEALLYAAARRQHLTETILPALARGQVVFCDRYVDSSIAYQGAGREIGPEAVYQ 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + +P+ TI LD+ ++GLKR+ + +D + + + HE+ R +L Sbjct: 120 MNLFATEGCLPEKTIYLDVSAEVGLKRIM----THRTDDVDRLDLEQLDFHERVRDAYLA 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ P+R ++D++ S V ++N++ ++++ Sbjct: 176 LAKRYPERIVVIDASQSIGDVKKAVINVLDQILK 209 >gi|170744323|ref|YP_001772978.1| dTMP kinase [Methylobacterium sp. 4-46] gi|168198597|gb|ACA20544.1| dTMP kinase [Methylobacterium sp. 4-46] Length = 226 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 84/197 (42%), Positives = 121/197 (61%), Gaps = 1/197 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+ EG EGAGK+T ++ L +L+R + +V TREPGG+P AE R LL+ + Sbjct: 6 RPGLFITLEGGEGAGKSTQVARLAEWLRRSDREVVTTREPGGSPRAEQIRTALLAGAAKD 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G AEA++F+AARLDH+ ++IRPAL G +++CDRF DS+ AYQG + +L+ Sbjct: 66 HGPFAEALLFSAARLDHLASLIRPALARGAVVVCDRFADSTRAYQGVAGGIDPECVAALE 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T+ILDLP +IGL R + R + D FE + + H++ R+ F IA Sbjct: 126 RVVVGATRPDLTLILDLPPEIGLARARGRERGL-ARGPDRFEAEALAFHQRLREAFRGIA 184 Query: 182 RNQPDRCHIVDSAHSFQ 198 +P RC +VD+A Sbjct: 185 AREPARCALVDAAGEPD 201 >gi|309800190|ref|ZP_07694374.1| thymidylate kinase [Streptococcus infantis SK1302] gi|308116178|gb|EFO53670.1| thymidylate kinase [Streptococcus infantis SK1302] Length = 212 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 4/215 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + + L+ + +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEAIIPILEDRGIEVLSTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 EMDPKTELLLYIASRRQHLVEKVLPALAAGKLVIMDRFIDSSVAYQGFGRGLDKKAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + PD T+ D+ V+ GL R+ ++ + + + +H K RQ +L + Sbjct: 121 NEFATDGLKPDLTLYFDIEVEEGLARIAANSD----REINRLDMEGLDLHRKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + DR +D++ V N ++++ + R Sbjct: 177 LEKEADRIVKIDASLPLDQVIANTQQLLFDRMGLR 211 >gi|269214814|ref|ZP_06158844.1| dTMP kinase [Neisseria lactamica ATCC 23970] gi|269208972|gb|EEZ75427.1| dTMP kinase [Neisseria lactamica ATCC 23970] Length = 210 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 116/199 (58%), Gaps = 7/199 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ G Sbjct: 7 FITLDGIDGAGKSTNLAAIKVWFERRGLPVLFTREPGGTALGEALREILLNPATKA-GLR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 66 AETMMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P ++ + R+ + D FE+++ ++ RQ++L A QP Sbjct: 126 GGLKPDLTLLLDVPPEVSMARIGQ------TREKDRFEQEEAGFFKRVRQVYLQRAGRQP 179 Query: 186 DRCHIVDSAHSFQSVATNI 204 +R ++D + S ++V I Sbjct: 180 ERYAVIDGSRSPEAVGHQI 198 >gi|301801780|emb|CBW34491.1| thymidylate kinase [Streptococcus pneumoniae INV200] Length = 212 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ + ++ + + +++H+K R+ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLVLHKKVRKGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFDRM 208 >gi|309803553|ref|ZP_07697646.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d] gi|312870920|ref|ZP_07731025.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a] gi|308164437|gb|EFO66691.1| dTMP kinase [Lactobacillus iners LactinV 11V1-d] gi|311093610|gb|EFQ51949.1| dTMP kinase [Lactobacillus iners LEAF 3008A-a] Length = 213 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 114/211 (54%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R+++L E Sbjct: 2 KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + + Sbjct: 62 MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ GL+R+Q E D E+++ + H+K + + Sbjct: 122 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ S VA+ + I+ E + Sbjct: 178 SAYPERIKRVDAELSIAEVASQSVKILEEYM 208 >gi|298530498|ref|ZP_07017900.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1] gi|298509872|gb|EFI33776.1| thymidylate kinase [Desulfonatronospira thiodismutans ASO3-1] Length = 223 Score = 252 bits (645), Expect = 3e-65, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 116/210 (55%), Gaps = 1/210 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGIEG GK+T L+ +L+ Y V VT EPGG+ R +LLS D+ Sbjct: 1 MFITFEGIEGCGKSTQTEFLRDYLEGLGYSVLVTLEPGGSRLGVELRRMLLSLESDDLTR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ A R HV VIRPAL G+I++ DRF S+ AYQG L + ++ Sbjct: 61 EAELFLYLADRAQHVHQVIRPALEAGRIVISDRFTHSTLAYQGYGREMGVDALQEMNIMA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 V +PD T +LDLP + GL+R R + + FE + + H + RQ +L++A Sbjct: 121 VDGTVPDITFLLDLPPETGLRRALGRNMEKNLTSSEGRFEAEALEFHVRVRQGYLELASR 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++ ++D+ ++V ++ V E+++ Sbjct: 181 KKEKIVVLDAQALPETVFQGVVGKVNEIMK 210 >gi|256384283|gb|ACU78853.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385116|gb|ACU79685.1| dTMP kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455961|gb|ADH22196.1| dTMP kinase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 213 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEAIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG + + +Q+I Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVSEVQQIV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ D+ KR+Q R + + +++ +K Q +L++ +N Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----SSKNRLDKEKSDFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+ V + I+ E +++ Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKE 206 >gi|304405877|ref|ZP_07387535.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9] gi|304345120|gb|EFM10956.1| thymidylate kinase [Paenibacillus curdlanolyticus YK9] Length = 211 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 7/217 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EGAGKTT IS L L V +TREPGG P AE R V+L Sbjct: 1 MEQGVFITIEGGEGAGKTTIISRLAAELSALGDTVTITREPGGIPIAEQIRAVILDRNHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H+ + PAL +G ++LCDRF+DSS AYQG + ++ Sbjct: 61 GMDGRTEALLYAAARRQHLVEKVVPALEKGHVVLCDRFIDSSLAYQGHARGIGMEAVLAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +MP T+ LD+ ++GL+R+Q E ++ + + + HE+ R+ FL + Sbjct: 121 NAFAIDGMMPKLTLYLDVRPEVGLRRIQE----AEVREINRIDLEAITFHEQVREGFLQL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A+ DR ++D+ S +V ++I+ +++R Sbjct: 177 AQMYSDRIVVIDAEQSADAVFEQCMSII---LKRRAG 210 >gi|330891466|gb|EGH24127.1| thymidylate kinase [Pseudomonas syringae pv. mori str. 301020] Length = 189 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 78/194 (40%), Positives = 111/194 (57%), Gaps = 6/194 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG + L+E Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTDATYAYQGGGRGLSQQRIAVLEE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DLPV+IGL R R LD FE++ + R +L A+ Sbjct: 122 FVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRAFFDAVRSTYLQRAK 175 Query: 183 NQPDRCHIVDSAHS 196 P R +VD+A Sbjct: 176 ADPARYRLVDAAQP 189 >gi|316934063|ref|YP_004109045.1| thymidylate kinase [Rhodopseudomonas palustris DX-1] gi|315601777|gb|ADU44312.1| thymidylate kinase [Rhodopseudomonas palustris DX-1] Length = 230 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 132/211 (62%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T I LL + L++ VTREPGG+P AEA R LL+ Sbjct: 12 RGRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLAGIGKLI 71 Query: 63 G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G A+AEA++FAAAR DHV +I PAL G+ +LCDRF DS+ AYQG+ + + L++LQ Sbjct: 72 GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVRLELLEALQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ ++ PD T+ILD+PV+IGL R R R S D FE + + H R++F IA Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RC ++D+ + VA + V + Sbjct: 189 AQEPERCVLIDANAEPEEVADRVWQAVRLRL 219 >gi|323126677|gb|ADX23974.1| thymidylate kinase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 211 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 61/214 (28%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + + L+ + + ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQVVPLLKERLSQEIVTTREPGGVAISEHIRELILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLSKTDIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + P+ T+ D+P +IGL R+ ++ ++ + + V +H++ R+ +L Sbjct: 121 LNRFATDGLEPNLTLYFDVPSEIGLARIAAN----KNREVNRLDLEAVDMHQRVREGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ QP+R +D++ + V L + L++ Sbjct: 177 LAQEQPNRIVTIDASKPLEDVVDVALAHILALME 210 >gi|307704911|ref|ZP_07641802.1| thymidylate kinase [Streptococcus mitis SK597] gi|307621525|gb|EFO00571.1| thymidylate kinase [Streptococcus mitis SK597] Length = 212 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIRQVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALETGKLVIMDRFIDSSLAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ + ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIVANSN----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +D++ + V ++++ + Sbjct: 177 LDKEGSRIVKIDASLPLEQVVETTKAVLFDRM 208 >gi|300811154|ref|ZP_07091666.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497858|gb|EFK32868.1| dTMP kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 212 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 5/208 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG +GAGKTT I+ + + +Q + ++ VTREPGG+ AE R ++L E Sbjct: 2 QGYFITFEGPDGAGKTTVINEVVKAIQGQCKREILVTREPGGSKIAEKIRDIILDPANTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ EA+++AA+R HV +I PAL G +++ DRF+DSS AYQG+ + + Sbjct: 62 MNAKTEALLYAASRSQHVSEIINPALKRGDLVISDRFVDSSLAYQGQGRGLGIDEVAQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL GL R+ S D E++ + HE+ + + + Sbjct: 122 AFATGYLEPDLTIFLDLDPAQGLARIAK----VRSGSEDRLEQEKLSFHEEVYRGYQKVN 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 + PDR +VD++ V + ++ Sbjct: 178 QAHPDRVKVVDASQDLPQVVAASVKLMK 205 >gi|257879313|ref|ZP_05658966.1| thymidylate kinase [Enterococcus faecium 1,230,933] gi|257881871|ref|ZP_05661524.1| thymidylate kinase [Enterococcus faecium 1,231,502] gi|257885061|ref|ZP_05664714.1| thymidylate kinase [Enterococcus faecium 1,231,501] gi|257890139|ref|ZP_05669792.1| thymidylate kinase [Enterococcus faecium 1,231,410] gi|257893467|ref|ZP_05673120.1| thymidylate kinase [Enterococcus faecium 1,231,408] gi|258615719|ref|ZP_05713489.1| thymidylate kinase [Enterococcus faecium DO] gi|260558755|ref|ZP_05830944.1| thymidylate kinase [Enterococcus faecium C68] gi|261207350|ref|ZP_05922037.1| thymidylate kinase [Enterococcus faecium TC 6] gi|289566857|ref|ZP_06447266.1| thymidylate kinase [Enterococcus faecium D344SRF] gi|293559585|ref|ZP_06676119.1| thymidylate kinase [Enterococcus faecium E1162] gi|293567580|ref|ZP_06678924.1| thymidylate kinase [Enterococcus faecium E1071] gi|294615743|ref|ZP_06695593.1| thymidylate kinase [Enterococcus faecium E1636] gi|294617668|ref|ZP_06697295.1| thymidylate kinase [Enterococcus faecium E1679] gi|294621756|ref|ZP_06700916.1| thymidylate kinase [Enterococcus faecium U0317] gi|257813541|gb|EEV42299.1| thymidylate kinase [Enterococcus faecium 1,230,933] gi|257817529|gb|EEV44857.1| thymidylate kinase [Enterococcus faecium 1,231,502] gi|257820913|gb|EEV48047.1| thymidylate kinase [Enterococcus faecium 1,231,501] gi|257826499|gb|EEV53125.1| thymidylate kinase [Enterococcus faecium 1,231,410] gi|257829846|gb|EEV56453.1| thymidylate kinase [Enterococcus faecium 1,231,408] gi|260075214|gb|EEW63527.1| thymidylate kinase [Enterococcus faecium C68] gi|260078410|gb|EEW66114.1| thymidylate kinase [Enterococcus faecium TC 6] gi|289161345|gb|EFD09236.1| thymidylate kinase [Enterococcus faecium D344SRF] gi|291589681|gb|EFF21485.1| thymidylate kinase [Enterococcus faecium E1071] gi|291591394|gb|EFF23053.1| thymidylate kinase [Enterococcus faecium E1636] gi|291596075|gb|EFF27341.1| thymidylate kinase [Enterococcus faecium E1679] gi|291598643|gb|EFF29700.1| thymidylate kinase [Enterococcus faecium U0317] gi|291606461|gb|EFF35861.1| thymidylate kinase [Enterococcus faecium E1162] Length = 214 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 2 NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 62 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R++ +D + + + H++ R +L +A Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R H VD+ SF+ V + + E Sbjct: 178 EENPERIHKVDARKSFEEVLQTSYHTIIE 206 >gi|56697578|ref|YP_167947.1| thymidylate kinase [Ruegeria pomeroyi DSS-3] gi|81558404|sp|Q5LPV9|KTHY_SILPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56679315|gb|AAV95981.1| thymidylate kinase [Ruegeria pomeroyi DSS-3] Length = 211 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEGI+G+GK+T LL L+ +DV +TREPGG+P AE R ++L D + Sbjct: 4 TGLFLTFEGIDGSGKSTQARLLAETLRAAGHDVVLTREPGGSPGAEEIRRLVLEGDPDRW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL G++++CDRF DS+ YQG +D L Sbjct: 64 SAETEILLFTAARRDHLERTIEPALAAGRVVICDRFADSTRMYQGLSRGDLRQLVDQLHA 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+++D+ + GL R + R E FE + ++ R FLD+AR Sbjct: 124 LMI-GREPDLTLLVDMDPETGLSRAKGRQGSEE-----RFEDFGPELQQRMRAGFLDLAR 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R I+D SVA ++ IV + + Sbjct: 178 EYAHRFRIIDGNRDMDSVAADVTEIVLTHLNR 209 >gi|42518522|ref|NP_964452.1| thymidylate kinase [Lactobacillus johnsonii NCC 533] gi|59798356|sp|Q74KZ7|KTHY_LACJO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|41582807|gb|AAS08418.1| thymidylate kinase [Lactobacillus johnsonii NCC 533] Length = 213 Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ + + L + + VTREPGG+ +E R ++L E Sbjct: 2 RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPENKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG + + + Sbjct: 62 MDDRTEALLYAAQRSQHVSEVIRPALATGKVVLSDRFIDSSLAYQGVGRNLGIEEVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LDL +GL R++ + D E++ + H K + ++ Sbjct: 122 DFGTGGLEPDLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELF 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR VD+ + VA N + I+ + + Sbjct: 178 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 208 >gi|325912933|ref|ZP_08175307.1| dTMP kinase [Lactobacillus iners UPII 60-B] gi|325477747|gb|EGC80885.1| dTMP kinase [Lactobacillus iners UPII 60-B] Length = 213 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 2 KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + + Sbjct: 62 MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD TI D+ GL+R+Q E D E+++ + H+K + + Sbjct: 122 EFATRHITPDLTIFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ S V + + I+ E + Sbjct: 178 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 208 >gi|308388855|gb|ADO31175.1| putative thymidylate kinase [Neisseria meningitidis alpha710] gi|325129800|gb|EGC52608.1| thymidylate kinase [Neisseria meningitidis OX99.30304] gi|325135738|gb|EGC58350.1| thymidylate kinase [Neisseria meningitidis M0579] gi|325197890|gb|ADY93346.1| thymidylate kinase [Neisseria meningitidis G2136] gi|325202534|gb|ADY97988.1| thymidylate kinase [Neisseria meningitidis M01-240149] gi|325207716|gb|ADZ03168.1| thymidylate kinase [Neisseria meningitidis NZ-05/33] Length = 206 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 71/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ S D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------SREKDRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R I+DS S V NI ++ Sbjct: 178 ERYAIIDSNRSLDEVRNNIEKVL 200 >gi|307708576|ref|ZP_07645040.1| thymidylate kinase [Streptococcus mitis NCTC 12261] gi|307615325|gb|EFN94534.1| thymidylate kinase [Streptococcus mitis NCTC 12261] Length = 212 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLETLLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLNIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ + ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSN----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +D++ + V ++++ + Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFDRM 208 >gi|170747926|ref|YP_001754186.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831] gi|170654448|gb|ACB23503.1| dTMP kinase [Methylobacterium radiotolerans JCM 2831] Length = 240 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 85/197 (43%), Positives = 118/197 (59%), Gaps = 2/197 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG EGAGK+T I+ L L+ + V VTREPGG+P AE R LL Sbjct: 13 GGTFITFEGGEGAGKSTQIARLAATLRARSGRPVCVTREPGGSPRAEEIRAALLDGVAKP 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G AEA++F+AAR+DH++ +IRPAL G+ +LCDRF+DS+ AYQG +D+L+ Sbjct: 73 YGPFAEALLFSAARIDHLDRLIRPALRRGETVLCDRFIDSTRAYQGAAGGLDPGIVDALE 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T+ILDL + GL R R R D FE + + H + R+ FL IA Sbjct: 133 RVVVGPTRPDLTLILDLAPESGLARAAGRG-ARTGQGADRFEAEALDFHVRLREAFLAIA 191 Query: 182 RNQPDRCHIVDSAHSFQ 198 +PDRC ++D++ Sbjct: 192 GAEPDRCAVIDASRDPD 208 >gi|311695098|gb|ADP97971.1| thymidylate kinase [marine bacterium HP15] Length = 213 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 115/212 (54%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EG GK+T ++ L D VTREPGGTP AEA R +LL+ + Sbjct: 4 RGQFITFEGTEGVGKSTQLTNAADTLAGLGVDYIVTREPGGTPMAEAVRELLLAPRDEPV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR H+ I PAL +G+ +LCDRF D+++AYQG + L+ Sbjct: 64 NEITELLLMFAARAQHLHTRILPALEQGQWVLCDRFTDATFAYQGGGRGVPEERIALLET 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ PD I+LD PVD G+ R + R LD FE++D+ ++ R+ +L A Sbjct: 124 LVQGDIRPDHVIVLDAPVDTGMARARKRGD------LDRFEQEDLEFFQRIRETYLARAM 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 QP R H++D+A V+ + ++ + + Sbjct: 178 AQPSRYHVIDAARPLAEVSGQVSELLNHWLSR 209 >gi|288554635|ref|YP_003426570.1| thymidylate kinase [Bacillus pseudofirmus OF4] gi|288545795|gb|ADC49678.1| thymidylate kinase [Bacillus pseudofirmus OF4] Length = 213 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 124/214 (57%), Gaps = 4/214 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+ EG EGAGKTT + +++ L+ +N V TREPGG AE R V+L Sbjct: 1 MKTGLFITVEGGEGAGKTTIVDKIEQDLRARNISVVRTREPGGIRIAERIREVILDVDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A EA+++AAAR H+ + PAL EG +++CDRF+DSS AYQG + ++ Sbjct: 61 EMDARTEALLYAAARRQHLIEKVLPALEEGNVVICDRFIDSSLAYQGHARGIGFNDVLAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ PD T+ ++ ++GL R++ R RE ++ +++ HEK ++ + + Sbjct: 121 NEFAIEGNYPDLTLFFNIEPEVGLARIK-RSGTRE---VNRLDQEVFDFHEKVKEGYEKV 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PDR ++++ +V ++ + ++ + ++K Sbjct: 177 IAQYPDRMAVINADQEVDAVFSDAMAVINDFLKK 210 >gi|254445325|ref|ZP_05058801.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235] gi|198259633|gb|EDY83941.1| thymidylate kinase [Verrucomicrobiae bacterium DG1235] Length = 214 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61 +G F +FEG EG+GK+T I LL L ++V VTREPGGT E RH+L+ + Sbjct: 8 TGKFFTFEGSEGSGKSTQIELLAEELAGMGHEVVVTREPGGTSIGEEIRHLLIHSSAGKD 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EAE ++FAAAR V +I P L +G I+LCDRFLDS+ YQG S + + Sbjct: 68 MTPEAELLLFAAARAQLVRELILPELEKGSIVLCDRFLDSTTVYQGAARSIASDPVSYIN 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +V + P T ILD+P + ++RV+ R S D E+++ ++K R +L +A Sbjct: 128 QFAVGPLSPTLTFILDVPAEESIRRVKRRV----SDLPDRMEQENNDFYKKVRDGYLLLA 183 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++ P+R H+VD S IL V + Sbjct: 184 KSMPERFHVVDGTRSLAVNREEILKTVLD 212 >gi|309806674|ref|ZP_07700670.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b] gi|308166979|gb|EFO69162.1| dTMP kinase [Lactobacillus iners LactinV 03V1-b] Length = 213 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R+++L E Sbjct: 2 KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRNIILDPKNKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + + Sbjct: 62 MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ GL+R+Q E D E+++ + H+K + + Sbjct: 122 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ S V + + I+ E + Sbjct: 178 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 208 >gi|152980260|ref|YP_001353676.1| thymidylate kinase [Janthinobacterium sp. Marseille] gi|166221747|sp|A6SZH9|KTHY_JANMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|151280337|gb|ABR88747.1| thymidylate kinase (dTMP kinase) [Janthinobacterium sp. Marseille] Length = 204 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEGI+GAGK+TH+S + L + V VTREPGGT E R +LL + Sbjct: 1 MTTGKFITFEGIDGAGKSTHLSFVAELLCERKKTVVVTREPGGTSLGEELREILLH---E 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG L++L Sbjct: 58 KMHLETEALLMFAARREHIAQVIAPALERGDWVISDRFTDATFAYQGGGRKLDRAKLNAL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + P T++ D+P+D+ R+ + LD FE++ R +L Sbjct: 118 EQWVHPHLQPHLTLLFDVPLDVARARLDA------TRTLDKFEQEKAEFFAATRAEYLRR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R H++DS S ++ + IV Sbjct: 172 AAEFPQRFHVIDSTRSIAAIQEQLRAIV 199 >gi|254475335|ref|ZP_05088721.1| thymidylate kinase [Ruegeria sp. R11] gi|214029578|gb|EEB70413.1| thymidylate kinase [Ruegeria sp. R11] Length = 227 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 117/214 (54%), Gaps = 6/214 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++FEGI+G+GK+T +L L+ + DV +TREPGG+ AE R ++L D Sbjct: 14 RGGLFVTFEGIDGSGKSTQCRMLADTLRARGLDVVLTREPGGSDGAEEIRRLVLEGDPDR 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE E ++F AAR DH+E I PAL G++++CDRF DS+ YQG +D L Sbjct: 74 WSAETELLLFTAARRDHLERRILPALAAGQVVVCDRFADSTRMYQGLSRGDLRASVDQLH 133 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI++D+ GL R + R E FE + + ++ R FL +A Sbjct: 134 RLMIGH-EPDLTILIDMDPAKGLARAKGRQGSEE-----RFEDFGLDLQQRMRAGFLALA 187 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +R ++D VA ++L+IV + + Sbjct: 188 QEFANRFRVIDGDRPMDVVAQDVLDIVAAALPEH 221 >gi|88705148|ref|ZP_01102860.1| Thymidylate kinase [Congregibacter litoralis KT71] gi|88700843|gb|EAQ97950.1| Thymidylate kinase [Congregibacter litoralis KT71] Length = 209 Score = 251 bits (643), Expect = 4e-65, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I +G GAGKTT I ++ LQ N + TREPGGTP E R +LLS Sbjct: 1 MKKGRMIVVDGSNGAGKTTVIEAIRDHLQHVNRETVFTREPGGTPIGEKIREILLSPEAG 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++FAAAR HV I PA+ GK+++ DRF ++ ++Q + +L Sbjct: 61 EMADVTELMLFAAARAQHVREKIMPAVEAGKVVVSDRFDSATVSFQHYARGLPLELITTL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 EI+V + PD TIILDL + GL RV +R LD E++ + K R +L Sbjct: 121 NEIAVDGLKPDMTIILDLDPEAGLVRVGSRGDD-----LDRLEKEKLDFLHKARDGYLGQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ PD ++D++ S +V + +L++V ++++ Sbjct: 176 AKASPDNFVVIDASQSLDNVISEVLSVVDQVIE 208 >gi|319898926|ref|YP_004159019.1| Thymidylate kinase [Bartonella clarridgeiae 73] gi|319402890|emb|CBI76441.1| Thymidylate kinase [Bartonella clarridgeiae 73] Length = 210 Score = 251 bits (643), Expect = 5e-65, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT ISLL + L K YDV +TREPGGT AEA R++LLS V ++ Sbjct: 2 SGYFITFEGGEGAGKTTQISLLAQHLGSKGYDVIITREPGGTVGAEAIRYILLSGSVAQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E ++F AAR DHV +I+P+L GKI+LCDRF+DS+ YQG + L L+ Sbjct: 62 GPFIETVLFTAARADHVAEIIKPSLQAGKIVLCDRFIDSTRVYQGINNKVDTHILSILEY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ + PD T +LD+P G++R+ R ++YFE+ D+ I E+RRQ FL++A+ Sbjct: 122 IGMKGIKPDLTFLLDIPAKFGIERINLRRK-----KINYFEKDDLDIQEQRRQAFLELAK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++P R ++D + + +A I +I ++ Sbjct: 177 HEPHRFQVIDGTCAVEVIADQIKDICHRVI 206 >gi|302379541|ref|ZP_07268026.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3] gi|303234538|ref|ZP_07321175.1| dTMP kinase [Finegoldia magna BVS033A4] gi|302312448|gb|EFK94444.1| dTMP kinase [Finegoldia magna ACS-171-V-Col3] gi|302494372|gb|EFL54141.1| dTMP kinase [Finegoldia magna BVS033A4] Length = 203 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 70/206 (33%), Positives = 111/206 (53%), Gaps = 7/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GK+T I + +L NYDV TREPGG+P AE R+++L + G Sbjct: 1 MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I PAL E KI+LCDRFL SS AYQG + ++ E + Sbjct: 61 RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD + D+ LKR + D E++ HE+ + +I ++ Sbjct: 121 INGIFPDFVLFFDVDPITTLKRKSS------LDTADRLEKEGNNFHERVYNGYKEILNSE 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 + I+D+ S + V + + ++ Sbjct: 175 KN-IEIIDATQSVEDVFSQCIEVLKR 199 >gi|228478159|ref|ZP_04062767.1| thymidylate kinase [Streptococcus salivarius SK126] gi|228249838|gb|EEK09108.1| thymidylate kinase [Streptococcus salivarius SK126] Length = 209 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKTT + L L+ V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTTVLEALLPRLREVYPAQVVTTREPGGVAIAEQIREVILDVNN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L +G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGTGRGLNQDEIAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L PD T++ D+ + GL R+ ++ + + + +H++ RQ +LD Sbjct: 121 LNAYVTDGYKPDVTLLFDVDSETGLARIAASGE----REVNRLDLEKLDLHQRVRQGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ +P+R ++D++ +F+ V ++ + Sbjct: 177 LAKAEPERIKLIDASQAFEDVVEQAWKVIEGYL 209 >gi|329666793|gb|AEB92741.1| thymidylate kinase [Lactobacillus johnsonii DPC 6026] Length = 213 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+FEG +GAGKTT I+ + + L + + VTREPGG+ +E R ++L E Sbjct: 2 RGYLITFEGPDGAGKTTVINEIIKQLPQSLQERTLVTREPGGSKISENIRTIILDPKNKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV VIRPAL GK++L DRF+DSS AYQG + + + Sbjct: 62 MDDRTEALLYAAQRSQHVSEVIRPALAAGKVVLSDRFIDSSLAYQGVGRNLGVEEVKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + P+ TI LDL +GL R++ + D E++ + H K + ++ Sbjct: 122 DFGTGGLEPNLTIFLDLDPAVGLARIEK----ERAGQEDRLEQEKIDFHNKVYAGYRELL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR VD+ + VA N + I+ + + Sbjct: 178 ERYPDRIKKVDANLPIKDVAANSVKIIRKQL 208 >gi|154248245|ref|YP_001419203.1| dTMP kinase [Xanthobacter autotrophicus Py2] gi|154162330|gb|ABS69546.1| dTMP kinase [Xanthobacter autotrophicus Py2] Length = 217 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 90/212 (42%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T L L+ + V TREPGG+P AEA RHVLLS + Sbjct: 1 MTQGRFITLEGGEGTGKSTQARRLAAHLRTLGHTVVETREPGGSPGAEAVRHVLLSGAAE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G AEA++FAAAR DHV+ +IRPAL G I++CDRF+DS+ YQG LD+L Sbjct: 61 PLGPVAEALLFAAARTDHVQTLIRPALAAGTIVICDRFIDSTRVYQGAVGQVAPPLLDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E++ PD T+ILD+P + GL R R + D FE++ H R+ F+ Sbjct: 121 EEMATGGTRPDLTLILDVPPETGLARAAARGN----GDPDRFEKEGAAYHAAVREAFVAR 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P RC +VD+ +VA I IV + Sbjct: 177 AAAAPARCVLVDATPDPDAVAAQIAGIVAARL 208 >gi|300214869|gb|ADJ79285.1| Thymidylate kinase (dTMP kinase) [Lactobacillus salivarius CECT 5713] Length = 208 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 118/210 (56%), Gaps = 5/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++FEGI+G+GKT+ + + L K D TREPGG +EA R ++L+ E Sbjct: 3 GKFVTFEGIDGSGKTSVLKGVIEHLNDKRIDNYIWTREPGGNRISEAIRKIILNVEYTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + + PAL EGK++LCDRF+DSS YQG + L E Sbjct: 63 DARTEALLYAAARRQHLVDTVLPALNEGKLVLCDRFVDSSVVYQGVARDIGVEPVIKLNE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + PD T+ D+ +I LKR+ N +D +++ + + K RQ +L +A Sbjct: 123 FATENLKPDLTLYYDVEPEISLKRISNN----RQNQVDRLDKESMDFYHKVRQAYLSLAE 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R ++D++ + V + L+I+ + Sbjct: 179 SNKERIKVIDASQNLDKVIDDTLSILNNFM 208 >gi|254517430|ref|ZP_05129486.1| dTMP kinase [Clostridium sp. 7_2_43FAA] gi|226911179|gb|EEH96380.1| dTMP kinase [Clostridium sp. 7_2_43FAA] Length = 209 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 111/213 (52%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G FI FEG +G+GK+T + ++ +L N + TREPGG +E R V+L Sbjct: 1 MDKGKFIVFEGGDGSGKSTILDMVYDYLIENNIECIKTREPGGIKISEDIREVILDTKNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + EA+++AAAR H+ + P + G I+LCDRF+ SS AYQG + + + Sbjct: 61 KMDSRTEALLYAAARRQHLVEKVIPEIDRGAIVLCDRFIYSSLAYQGYARNIGIDEIYQI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +V E MPD I+ DL +IGL+R+ ++ + + + H K R +L + Sbjct: 121 NKFAVGEYMPDLNILFDLSPEIGLERINKNKE----REINRLDLEKIDFHNKVRDGYLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ +++ S + V + I+ + ++ Sbjct: 177 YEENKEKFVKINAEKSIEEVFNVVKEIITDFIK 209 >gi|59800692|ref|YP_207404.1| thymidylate kinase [Neisseria gonorrhoeae FA 1090] gi|194097952|ref|YP_002000998.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945] gi|240013551|ref|ZP_04720464.1| thymidylate kinase [Neisseria gonorrhoeae DGI18] gi|240015990|ref|ZP_04722530.1| thymidylate kinase [Neisseria gonorrhoeae FA6140] gi|240080130|ref|ZP_04724673.1| thymidylate kinase [Neisseria gonorrhoeae FA19] gi|240112344|ref|ZP_04726834.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|240115084|ref|ZP_04729146.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|240117368|ref|ZP_04731430.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|240120623|ref|ZP_04733585.1| thymidylate kinase [Neisseria gonorrhoeae PID24-1] gi|240122923|ref|ZP_04735879.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|240125177|ref|ZP_04738063.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|240127632|ref|ZP_04740293.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|254493144|ref|ZP_05106315.1| thymidylate kinase [Neisseria gonorrhoeae 1291] gi|260441100|ref|ZP_05794916.1| thymidylate kinase [Neisseria gonorrhoeae DGI2] gi|268596281|ref|ZP_06130448.1| thymidylate kinase [Neisseria gonorrhoeae FA19] gi|268598402|ref|ZP_06132569.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|268600757|ref|ZP_06134924.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|268603063|ref|ZP_06137230.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|268681542|ref|ZP_06148404.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|268683771|ref|ZP_06150633.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|268686011|ref|ZP_06152873.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|291044433|ref|ZP_06570142.1| thymidylate kinase [Neisseria gonorrhoeae DGI2] gi|293399613|ref|ZP_06643766.1| thymidylate kinase [Neisseria gonorrhoeae F62] gi|73920825|sp|Q5F9Z5|KTHY_NEIG1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621733|sp|B4RJR3|KTHY_NEIG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59717587|gb|AAW88992.1| putative thymidylate kinase [Neisseria gonorrhoeae FA 1090] gi|193933242|gb|ACF29066.1| thymidylate kinase [Neisseria gonorrhoeae NCCP11945] gi|226512184|gb|EEH61529.1| thymidylate kinase [Neisseria gonorrhoeae 1291] gi|268550069|gb|EEZ45088.1| thymidylate kinase [Neisseria gonorrhoeae FA19] gi|268582533|gb|EEZ47209.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|268584888|gb|EEZ49564.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|268587194|gb|EEZ51870.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|268621826|gb|EEZ54226.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|268624055|gb|EEZ56455.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|268626295|gb|EEZ58695.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|291011327|gb|EFE03323.1| thymidylate kinase [Neisseria gonorrhoeae DGI2] gi|291610182|gb|EFF39304.1| thymidylate kinase [Neisseria gonorrhoeae F62] Length = 206 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------AREKDRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS S V +I ++ Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200 >gi|313664899|ref|YP_004046770.1| dTMP kinase [Mycoplasma leachii PG50] gi|312949571|gb|ADR24167.1| dTMP kinase [Mycoplasma leachii PG50] Length = 213 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 119/210 (56%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKNMDV 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG + ++ +Q+I Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ D+ KR+Q R + + + ++ +K Q +L++ +N Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQLRGE----SSKNRLDEEENNFKQKVYQGYLELIKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ V + I+ E +++ Sbjct: 177 PERIKVIDANKDIDQVYNQAIKIILEKLKE 206 >gi|254448227|ref|ZP_05061689.1| thymidylate kinase [gamma proteobacterium HTCC5015] gi|198262094|gb|EDY86377.1| thymidylate kinase [gamma proteobacterium HTCC5015] Length = 213 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 6/214 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG EG GK+T++ ++++L + +V TREPGGTP EA R VLL + Sbjct: 2 KGRFITLEGGEGVGKSTNLRYVQQWLTGQGLNVVQTREPGGTPLGEALRGVLLGDQAEGI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA+AE + AAR +H++ VI PAL G +LCDRF D+SYAYQG + +L+ Sbjct: 62 GAKAELLTVFAARQEHLDKVIVPALERGDWVLCDRFTDASYAYQGGGRGLAFDTIAALEN 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++LD P+++G+ R R D FER+ E + + A Sbjct: 122 WVQGDLRPDLTLLLDAPLEVGMARAAER------GQADRFEREPRAFFEAVSEAYRRRAS 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + +R ++D+A SV I ++ E + + Sbjct: 176 TEAERYAVIDAAQDLASVQAQIDRVLSERLAPWL 209 >gi|78044441|ref|YP_358922.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901] gi|123577218|sp|Q3AG12|KTHY_CARHZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77996556|gb|ABB15455.1| thymidylate kinase [Carboxydothermus hydrogenoformans Z-2901] Length = 203 Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 110/209 (52%), Gaps = 9/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG+EG+GKTT I + R+L KN +TREPGGT + R +LL+ Sbjct: 2 RGKFITIEGVEGSGKTTQIQYIARYLTEKNIPHIITREPGGTALGKKIRELLLNPSY-PV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE +++ A R HV I P L +G ++ DR+ DS+ AYQG L S Sbjct: 61 VPEAEILLYLADRAQHVGEKIIPHLDKGVWVISDRYFDSTLAYQGYGRGFDLTLLKSFIA 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + ++PD T+++DLP ++GL RV+ R D ER+ + H++ R+ FL +AR Sbjct: 121 FATKGLIPDLTVLIDLPPEVGLSRVKGR------GEYDRLERETLEFHQRVREGFLQLAR 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + R +VD + + I + L Sbjct: 175 D--QRFRVVDGRKKPEEIFWEIKGFLEGL 201 >gi|331703062|ref|YP_004399749.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801617|emb|CBW53770.1| Thymidylate kinase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 213 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 120/210 (57%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K+ L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKKELERLNYQVLITREPGGEAIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG + + +Q+I Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVSEVQQIV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ D+ KR+Q R + + +++ +K Q +L++ +N Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----SSKNRLDKEKSDFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+ V + I+ E +++ Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKE 206 >gi|302190918|ref|ZP_07267172.1| thymidylate kinase [Lactobacillus iners AB-1] gi|309808247|ref|ZP_07702156.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a] gi|309810090|ref|ZP_07703936.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D] gi|312873623|ref|ZP_07733670.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d] gi|312875715|ref|ZP_07735710.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b] gi|325911589|ref|ZP_08173997.1| dTMP kinase [Lactobacillus iners UPII 143-D] gi|308168535|gb|EFO70644.1| dTMP kinase [Lactobacillus iners LactinV 01V1-a] gi|308169589|gb|EFO71636.1| dTMP kinase [Lactobacillus iners SPIN 2503V10-D] gi|311088707|gb|EFQ47156.1| dTMP kinase [Lactobacillus iners LEAF 2053A-b] gi|311090876|gb|EFQ49273.1| dTMP kinase [Lactobacillus iners LEAF 2052A-d] gi|325476575|gb|EGC79733.1| dTMP kinase [Lactobacillus iners UPII 143-D] Length = 213 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 5/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKTT I+ L + L K + VTREPGG+ +E R ++L E Sbjct: 2 KGYFISFEGPDGAGKTTIINELVQQLSSKTIAPILVTREPGGSKISENIRKIILDPKNKE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE EA+++AAAR HV I PAL GKI+ DRF+DSS AYQG + + Sbjct: 62 MNAETEALLYAAARSQHVIETIIPALNAGKIVFSDRFIDSSLAYQGIGRDLGIDEIKQIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T+ D+ GL+R+Q E D E+++ + H+K + + Sbjct: 122 EFATRHITPDLTLFFDIDPLKGLQRIQKVRPENE----DRLEQENNLFHQKVYTGYKQLL 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ S V + + I+ E + Sbjct: 178 SAYPERIKRVDAELSIAEVVSQSVKILEEYM 208 >gi|192291490|ref|YP_001992095.1| thymidylate kinase [Rhodopseudomonas palustris TIE-1] gi|238692602|sp|B3QKH1|KTHY_RHOPT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|192285239|gb|ACF01620.1| dTMP kinase [Rhodopseudomonas palustris TIE-1] Length = 230 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 93/211 (44%), Positives = 131/211 (62%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T I LL + L++ VTREPGG+P AEA R LL+ Sbjct: 12 RGRFITFEGGEGAGKSTQIRLLAKRLEKARLRTLVTREPGGSPGAEAIRSALLAGIGKLI 71 Query: 63 G-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G A+AEA++FAAAR DHV +I PAL G+ +LCDRF DS+ AYQG+ + L++LQ Sbjct: 72 GGADAEALLFAAARDDHVRTLIEPALARGEWVLCDRFYDSTRAYQGKLGAVSLDLLNALQ 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ ++ PD T+ILD+PV+IGL R R R S D FE + + H R++F IA Sbjct: 132 QVTIGDMKPDLTVILDIPVEIGLARAAVR---RGSETPDRFESEAIDFHRGLREVFRQIA 188 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RC ++D+ + VA I V + Sbjct: 189 AQEPERCALIDANAEPEEVADRIWQAVRLRL 219 >gi|120554780|ref|YP_959131.1| dTMP kinase [Marinobacter aquaeolei VT8] gi|120324629|gb|ABM18944.1| thymidylate kinase [Marinobacter aquaeolei VT8] Length = 214 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T + + L+R D VTREPGGTP AE+ R +LL+ + Sbjct: 3 LARGRFITFEGTEGVGKSTQLDNAAKTLERLGIDYIVTREPGGTPMAESIRELLLAPREE 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ AAR H+ N I PAL GK +LCDRF D+++AYQG + L Sbjct: 63 SVHETTELLLMFAARAQHLHNRILPALSAGKWVLCDRFTDATFAYQGGGRGVSRERIALL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + E+ PD I+LD PV+ G+ R + R LD FER+ ++ R+ +L+ Sbjct: 123 EALVQGEMRPDHVILLDAPVETGMARARKR------GELDRFEREAQAFFQRIRETYLER 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A P R H+V++A + V+ ++ ++ L + Sbjct: 177 ATEMPGRYHVVNAALPLEQVSESVSALLTALAK 209 >gi|46446707|ref|YP_008072.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia amoebophila UWE25] gi|59798299|sp|Q6MCA2|KTHY_PARUW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46400348|emb|CAF23797.1| putative thymidylate kinase, tmk [Candidatus Protochlamydia amoebophila UWE25] Length = 225 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 2/210 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-E 61 G FI+ EG EG+GK+T ++ L + + K ++V TREPGGT E+ RH+LL+ Sbjct: 7 KGYFITIEGGEGSGKSTLLNQLGDYFRNKGFEVIQTREPGGTKLGESIRHLLLNHEDSIS 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G +AE ++F AAR H+E +I+PAL GKI+LCDRF DS+ AYQG + Sbjct: 67 IGHQAELLLFLAARAQHIEELIQPALKAGKIVLCDRFNDSTIAYQGAARGLNAKKIQEFC 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQIFLDI 180 ++ E++P+ T+ LD+ +IGL R Q + LD E + + HE+ RQ FL + Sbjct: 127 QLVCAEILPNWTLFLDVSPEIGLARTQKIQKVHAQMGQLDRIESEKIEFHERVRQAFLSL 186 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +P R + +D+ S V L + E Sbjct: 187 VQQEPQRIYRIDANESQSKVLQKALEFLEE 216 >gi|15612605|ref|NP_240908.1| thymidylate kinase [Bacillus halodurans C-125] gi|14285517|sp|Q9KGL9|KTHY_BACHD RecName: Full=Thymidylate kinase gi|10172654|dbj|BAB03761.1| thymidylate kinase [Bacillus halodurans C-125] Length = 210 Score = 251 bits (642), Expect = 6e-65, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKT+ + ++ L+ V TREPGG P AE R ++L Sbjct: 1 MTKGCFITVEGGEGAGKTSALDAIEEMLRENGLSVVRTREPGGIPIAEQIRSIILDVDHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AAAR H+ + PAL G ++LCDRF+DSS AYQG + ++ Sbjct: 61 RMDPRTEALLYAAARRQHLVEKVLPALEAGHVVLCDRFIDSSLAYQGYARGIGFEDILAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ PD T++ + D+GL R+ +R RE + +++ + H+K ++ + I Sbjct: 121 NEFAIEGRYPDLTLLFRVDPDVGLSRI-HRDQSREQ---NRLDQEALTFHQKVKEGYERI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +D+ SF V + + ++ + + Sbjct: 177 VETYPERVVEIDANQSFDQVVADAVRMIKQRL 208 >gi|218532450|ref|YP_002423266.1| dTMP kinase [Methylobacterium chloromethanicum CM4] gi|218524753|gb|ACK85338.1| dTMP kinase [Methylobacterium chloromethanicum CM4] Length = 244 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 90/199 (45%), Positives = 124/199 (62%), Gaps = 4/199 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG EGAGK+T I+ L L+R +V TREPGGT AEA R LL Sbjct: 7 RGVFITFEGGEGAGKSTQIARLAETLRRVSGREVVTTREPGGTERAEALRAALLRGVAKP 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G AEA++FAAAR+DH+EN+IRPAL G I+LCDRF DS+ AYQG +DSL+ Sbjct: 67 YGPFAEALMFAAARIDHIENLIRPALDRGAIVLCDRFSDSTRAYQGAAGGLDPALIDSLE 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ ++ PD T+ILDLP + GL R + R + D FE + + HE+ R F IA Sbjct: 127 RVTLVDLRPDLTLILDLPPEAGLARARRRGA---GEPADRFEAEGMRFHERLRTAFRSIA 183 Query: 182 RNQPDRCHIVDSAHSFQSV 200 +P+RC ++D+ +V Sbjct: 184 EAEPERCRVIDADLGPDAV 202 >gi|171780208|ref|ZP_02921112.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281556|gb|EDT46991.1| hypothetical protein STRINF_01996 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 208 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ I+FEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIITFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKEIIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + S PD T+ D+ +IGL R+ ++ + + + +H++ RQ +LD+ Sbjct: 121 NDFSTDGRKPDLTLYFDVESEIGLARIAKNAD----REVNRLDLEKLDMHKRVRQGYLDL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A+ + +R +D++ + V +++ E + Sbjct: 177 AQTE-ERIVTIDASRELEQVVAEATHVILEKL 207 >gi|312866475|ref|ZP_07726693.1| dTMP kinase [Streptococcus downei F0415] gi|311098169|gb|EFQ56395.1| dTMP kinase [Streptococcus downei F0415] Length = 206 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 119/208 (57%), Gaps = 4/208 (1%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ EG +GAGKT+ + L L+ + + V TREPGG AE+ R V+L + Sbjct: 2 ITLEGPDGAGKTSVLERLVPLLEAQGHQVVTTREPGGVAIAESIREVILDVKNTAMDEKT 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E +++ AAR H + P L +GK++L DRF+DSS AYQG +D L + +++ Sbjct: 62 ELLLYIAARRQHFVEKVLPDLAQGKLVLVDRFIDSSVAYQGYGRGLSVTDIDWLNDYAIE 121 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 + PD T++ DLP ++GL R++ E ++ + + + +H++ RQ +L++A++QP+ Sbjct: 122 DTKPDLTLLFDLPSELGLARIEQ----AEVREVNRLDLEKLDMHQRVRQGYLELAKSQPE 177 Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214 R ++D+A + V + L+ + + K Sbjct: 178 RIKVIDAAQELEKVVADALSTIQLALAK 205 >gi|300114110|ref|YP_003760685.1| thymidylate kinase [Nitrosococcus watsonii C-113] gi|299540047|gb|ADJ28364.1| thymidylate kinase [Nitrosococcus watsonii C-113] Length = 210 Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 119/208 (57%), Gaps = 5/208 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EGIEGAGK+T ++ +++ LQ +V VTREPGGT E R +LLS ++ A+ Sbjct: 3 FIALEGIEGAGKSTQLTFIQQLLQSAGKNVVVTREPGGTLLGEQIRELLLSPRLESMSAD 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR++HV+ VI PAL GK +LCDRF +SYAYQG + +L+ ++ Sbjct: 63 TELLLMFAARVEHVQQVILPALAAGKWILCDRFTSASYAYQGGGRKLPLSRIATLESWAL 122 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD ++ D+P +GL+R R LD FE++ + ++ R +L +A+ P Sbjct: 123 NGLRPDLILLFDVPARLGLQRAATRCQ-----QLDRFEQEKIDFFDRVRMTYLSLAKRYP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++DS+ V I ++ ++ Sbjct: 178 AQYCLIDSSLPLLKVQEAIQKVMIAFLE 205 >gi|256848132|ref|ZP_05553576.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN] gi|256715192|gb|EEU30169.1| thymidylate kinase [Lactobacillus coleohominis 101-4-CHN] Length = 212 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 120/217 (55%), Gaps = 10/217 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVD 60 G FISFEG +GAGKT+ IS ++ +L +K V +TREPGG +E R +L Sbjct: 2 QGRFISFEGPDGAGKTSVISAIQEWLTQKYGKQAVLLTREPGGNRISEQIRQILFDDHNT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA++FAAAR H+ I PAL GK +L DR++DSS AYQG + L Sbjct: 62 NMDARTEALLFAAARRQHIVEDIEPALQAGKFVLSDRYVDSSVAYQGGGRHLGADDIWEL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ ++PD TI LD+P ++GL+R+ ++ +R+ + H+ R +L + Sbjct: 122 NQFAIHGLLPDLTIYLDIPSELGLERISK----HRQNQVNRLDREKLRFHQDVRNAYLTL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A+ R ++D++ +V +N+V E++Q R + Sbjct: 178 AQRHQKRIQLIDASQPLPTV----INMVQEMIQNRFN 210 >gi|91775853|ref|YP_545609.1| thymidylate kinase [Methylobacillus flagellatus KT] gi|123078858|sp|Q1H169|KTHY_METFK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91709840|gb|ABE49768.1| thymidylate kinase [Methylobacillus flagellatus KT] Length = 203 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 9/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG++GAGK++HI + L+ + +V TREPGGTP E R +LL + Sbjct: 2 RGRFITLEGMDGAGKSSHIESIVSVLEGRGLEVVSTREPGGTPLGEKLRELLLH---ERM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR +H+ VI PAL G ++ DRF D+S+AYQ +++L+ Sbjct: 59 HVETETLLMFAARREHIAEVIEPALARGAWVVSDRFTDASFAYQCGGRGVPCEKVEALEA 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ D+PV+I + R+ + D FER+ + R +L A Sbjct: 119 WVHPDLQPDLTLLFDVPVEISVARLAA------ARTPDKFERESAEFFRRIRNGYLARAE 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 QP R ++D +V +L+I+ E Sbjct: 173 AQPQRFRLIDGNRPMDTVRKEVLDIMREF 201 >gi|169824826|ref|YP_001692437.1| thymidylate kinase [Finegoldia magna ATCC 29328] gi|238687760|sp|B0S2F7|KTHY_FINM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|167831631|dbj|BAG08547.1| thymidylate kinase [Finegoldia magna ATCC 29328] Length = 203 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 7/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GK+T I + +L NYDV TREPGG+P AE R+++L + G Sbjct: 1 MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENIKMGY 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I PAL E KI+LCDRFL SS AYQG + ++ E + Sbjct: 61 RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRGLGIENVRNINEFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V PD + D+ LKR + D E++ HE+ + +I ++ Sbjct: 121 INGVFPDFVLFFDVDPITTLKRKSS------LDTADRLEKEGNNFHERVYNGYKEILNSE 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 + I+D+ S + V + + ++ Sbjct: 175 KN-IEIIDATQSVEDVFSQCIEVLKR 199 >gi|94987963|ref|YP_596064.1| thymidylate kinase [Streptococcus pyogenes MGAS9429] gi|94991847|ref|YP_599946.1| thymidylate kinase [Streptococcus pyogenes MGAS2096] gi|94541471|gb|ABF31520.1| thymidylate kinase [Streptococcus pyogenes MGAS9429] gi|94545355|gb|ABF35402.1| Thymidylate kinase [Streptococcus pyogenes MGAS2096] Length = 237 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 27 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 86 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 87 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 146 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 147 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 202 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 203 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 235 >gi|254479299|ref|ZP_05092640.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653] gi|214034774|gb|EEB75507.1| thymidylate kinase [Carboxydibrachium pacificum DSM 12653] Length = 208 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT + LL+ L+++ YD+ V REPGGT E R +LL + Sbjct: 2 RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLD-RENLI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PAL +G++++ DRF+DSSY YQG + + E Sbjct: 61 FPVTEMLLYASSRAQLVEEKILPALSKGQMVIVDRFVDSSYVYQGYARGLGLEKVKIVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + + PD T+ +D+ + +KR R+ D E +D H+K R+ +L + + Sbjct: 121 IATKGLFPDITVYIDITPEEAIKR-------RQGKKADRLEGEDYEFHKKVREGYLRLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P+R ++D +V ++ V E ++ Sbjct: 174 DFPERFVLIDGMQEVLAVHKMVVKAVEEYLK 204 >gi|197119572|ref|YP_002139999.1| thymidylate kinase [Geobacter bemidjiensis Bem] gi|229621737|sp|B5E9M9|KTHY_GEOBB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|197088932|gb|ACH40203.1| thymidylate kinase [Geobacter bemidjiensis Bem] Length = 225 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 4/217 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT + LLK L+ V VTREPGG P A+ R +LL Sbjct: 2 GFFITFEGIEGCGKTTQLRLLKERLEAAGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV+ VI PAL G+ +LCDRF D++ AYQG ++ L + Sbjct: 62 PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLTVIEELNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V P T+++D PV++GL R R A + FER+ ++ H+K R +L +A Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRNGYLTLAAA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 P+R +VD + +V E +++R+ L Sbjct: 182 FPERFVVVDGSGDV----RQTGLLVAEALRQRMQSLG 214 >gi|296315027|ref|ZP_06864968.1| dTMP kinase [Neisseria polysaccharea ATCC 43768] gi|296838232|gb|EFH22170.1| dTMP kinase [Neisseria polysaccharea ATCC 43768] Length = 206 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ S D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------SREKDRFEQEQEDFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS S V NI ++ Sbjct: 178 ERYAVIDSNRSLDEVRNNIERVL 200 >gi|297622813|ref|YP_003704247.1| thymidylate kinase [Truepera radiovictrix DSM 17093] gi|297163993|gb|ADI13704.1| thymidylate kinase [Truepera radiovictrix DSM 17093] Length = 217 Score = 251 bits (641), Expect = 7e-65, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 113/216 (52%), Gaps = 8/216 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG EG+GKTT + L L+ T+EPGGT E R ++L + Sbjct: 7 TRGVFIAFEGPEGSGKTTQLGRLAARLEALGQVPLTTKEPGGTAVGERLRALVLDPAL-R 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +++AA+R + V +V++PAL G+++LCDRF ++ AYQGE ++ L Sbjct: 66 MHPETELLLYAASRAELVASVLKPALAAGRVVLCDRFTGATVAYQGEGRGLPKDWIGVLN 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + P T++ DLP ++GL RV R D E+ HE+ R+ FL A Sbjct: 126 ARVTGGLKPHLTLLFDLPPEVGLARVARR------GARDRLEQAAFAFHERVRRGFLQQA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P H++D++ + VA + +V L++ R + Sbjct: 180 EQDPS-WHVLDASRPEEEVAGAVWRLVAPLLRDRGA 214 >gi|74317561|ref|YP_315301.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259] gi|123611774|sp|Q3SIM9|KTHY_THIDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|74057056|gb|AAZ97496.1| thymidylate kinase [Thiobacillus denitrificans ATCC 25259] Length = 204 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 113/208 (54%), Gaps = 9/208 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+TH+ + +L+ + +V VTREPGGT E R +LL E Sbjct: 5 GKFITLEGVDGAGKSTHVGFVAEWLRGQGREVIVTREPGGTALGETLRELLLH---REMA 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+ E ++ AAR H+ +I PAL G ++ DRF D+SYAYQ + +L++ Sbjct: 62 ADTELLLMFAARQQHLAELILPALARGAWVVSDRFTDASYAYQCGGRRIAAERIAALEDW 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T++ D+P + +R R S+R D FE++ + R +L AR Sbjct: 122 VQRGFAPDLTLLFDVPPAVAEER---RSSVR---AADRFEQEAGSFFARVRDAYLVRARA 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P R H++D+ + +V I ++ +L Sbjct: 176 EPHRIHVLDARQTIDAVQAEIARLLQDL 203 >gi|322388016|ref|ZP_08061623.1| thymidylate kinase [Streptococcus infantis ATCC 700779] gi|321141289|gb|EFX36787.1| thymidylate kinase [Streptococcus infantis ATCC 700779] Length = 212 Score = 251 bits (641), Expect = 8e-65, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + + L+ KN + TREPGG E R V+L Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEAILPLLEEKNIEFLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDPKTELLLYIASRRQHLVEKVLPALATGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL+R+ ++ + + + +H K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEKGLERIAANSD----REVNRLDLEGLDLHRKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ V N ++++ + Sbjct: 177 LEKEGERIVKIDASLPLNQVVENTKQVLFDRM 208 >gi|296128436|ref|YP_003635686.1| thymidylate kinase [Cellulomonas flavigena DSM 20109] gi|296020251|gb|ADG73487.1| thymidylate kinase [Cellulomonas flavigena DSM 20109] Length = 224 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 10/210 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+F+SFEG +G GK+T ++LL L +V VTREPGGTP R +L DE Sbjct: 15 AGVFVSFEGGDGVGKSTQVALLGHHLAALGREVVVTREPGGTPLGIELRRAVLHG--DEL 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA R HV +++RPAL G ++L DR+LDSS AYQG ++ L Sbjct: 73 DPRTEALLYAADRAHHVASLVRPALARGAVVLTDRYLDSSVAYQGSGRGLGADEVERLSL 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +V E++P T++LDL +GL R+ + D E H + R+ FL A Sbjct: 133 WAVDELLPHLTVLLDLDPVVGLARL--------TGDPDRLESAGDEFHRRTREAFLARAA 184 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D++ + VA + + L+ Sbjct: 185 ADPARWLVLDASQPAEDVAAQVRERLAPLL 214 >gi|319404208|emb|CBI77801.1| Thymidylate kinase [Bartonella rochalimae ATCC BAA-1498] Length = 217 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 96/214 (44%), Positives = 136/214 (63%), Gaps = 6/214 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG GKTT ISLL ++L RK YDV +TREPGGT AEA R++LLS V ++ Sbjct: 2 SGYFITFEGGEGVGKTTQISLLAQYLGRKGYDVIITREPGGTAGAEAIRYILLSGSVAQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS----QHLFLD 118 G E +F AAR DHV +I P+L GKI+LCDRF+DS+ YQG Sbjct: 62 GPFIETFLFTAARADHVSEIIMPSLQAGKIVLCDRFIDSTRVYQGINKGINNRVDAHIFS 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ I ++ + PD T +LD+P +G++RV R E +DYFE+ D+ I E+RRQ FL Sbjct: 122 ILEHIGMKGIKPDLTFLLDIPAKLGIERVNLRRKKIEK--IDYFEKDDLAIQEQRRQAFL 179 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++A+++P R ++D + + +A I +I +L+ Sbjct: 180 ELAKHEPYRFQVIDGTCAVEVIADQIKDICHQLL 213 >gi|212637874|ref|YP_002314394.1| Thymidylate kinase [Anoxybacillus flavithermus WK1] gi|226732650|sp|B7GFF9|KTHY_ANOFW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|212559354|gb|ACJ32409.1| Thymidylate kinase [Anoxybacillus flavithermus WK1] Length = 209 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 118/210 (56%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF SFEG EGAGKTT + +LK +L ++ DV TREPGG AE R V+L + A Sbjct: 4 LFFSFEGPEGAGKTTIVRMLKDYLSEQHVDVVATREPGGIDIAEQIRAVILHPNNERMDA 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AAAR H+ + PAL +GK++LCDRF+DSS AYQG + ++ + Sbjct: 64 RTEALLYAAARRQHLVEKVIPALKDGKVVLCDRFIDSSLAYQGVARGLGIDEILAINAFA 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ MP TI D+ +GL R++ S ++ + +++ HE+ R+ ++ + Sbjct: 124 IENWMPILTIYFDIDPSLGLARIRENG----SREVNRLDLEELSFHEQVRKGYMVLLDRF 179 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R VD+ V ++ ++ L++K Sbjct: 180 PNRIKKVDATQPITKVFEDVWALIEPLIRK 209 >gi|260905520|ref|ZP_05913842.1| thymidylate kinase [Brevibacterium linens BL2] Length = 904 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 115/214 (53%), Gaps = 8/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG +G+GK+T I + + L + Y V TREPGGT R VL + Sbjct: 411 AGFFIAIEGGDGSGKSTQIKRVSQILADEGYSVEATREPGGTELGRQIRSVLFDS--EPP 468 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++FAA R HV +++ P+L G I++ DR++DS+ AYQ + + +L + Sbjct: 469 SPRTEALLFAADRAHHVASLVDPSLDSGNIVITDRYIDSTIAYQAAGRNFDPKTILALSK 528 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + Q ++P TI+LD+ ++ R+ R +Y + ++ H++ RQ +L A Sbjct: 529 WATQGLVPHLTIVLDIDPEVSATRMGKRGEN------NYLDEENQQFHQRVRQTYLTRAH 582 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +PDR ++D++ S + + IL + + +++ Sbjct: 583 KEPDRYIVLDASVSEEDLTAEILTAIRTRLPRQM 616 >gi|15676568|ref|NP_273712.1| thymidylate kinase [Neisseria meningitidis MC58] gi|14285516|sp|Q9K0D9|KTHY_NEIMB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|7225896|gb|AAF41088.1| thymidylate kinase [Neisseria meningitidis MC58] gi|316983637|gb|EFV62618.1| thymidylate kinase [Neisseria meningitidis H44/76] gi|325139881|gb|EGC62412.1| thymidylate kinase [Neisseria meningitidis CU385] gi|325200644|gb|ADY96099.1| thymidylate kinase [Neisseria meningitidis H44/76] Length = 206 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++LD A P Sbjct: 124 GGLKPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS + V +I ++ Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200 >gi|261392957|emb|CAX50542.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis 8013] gi|325141921|gb|EGC64362.1| thymidylate kinase [Neisseria meningitidis 961-5945] Length = 206 Score = 250 bits (640), Expect = 8e-65, Method: Composition-based stats. Identities = 69/203 (33%), Positives = 118/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R I+DS S V +I ++ Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200 >gi|313900951|ref|ZP_07834441.1| dTMP kinase [Clostridium sp. HGF2] gi|312954371|gb|EFR36049.1| dTMP kinase [Clostridium sp. HGF2] Length = 210 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 6/216 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLFI+FEG +G+GKTT L L+ Y V TREPGG AE R ++L Sbjct: 1 MNKGLFITFEGNDGSGKTTISKLAYEKLKEMGYPVLYTREPGGIDIAEQIRSIILDPANT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AA+R H+ + PAL EGKI+LCDRF+DSS YQG + ++ Sbjct: 61 AMDERCEALLYAASRRQHLIEKVLPALKEGKIVLCDRFVDSSLVYQGIARGIGVEEVFAI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ +PD T+ L + + GL RV +R + D + + + H+ Q + I Sbjct: 121 NQFAIEGHLPDATVFLSVDFETGLSRVTSRGNK------DRLDNESMEFHKLVAQGYELI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +R HIVD+ +V N + + E+++ V Sbjct: 175 KDKFKERMHIVDANPDVDTVLNNTVACLMEIIKNHV 210 >gi|156743649|ref|YP_001433778.1| dTMP kinase [Roseiflexus castenholzii DSM 13941] gi|189030839|sp|A7NQB4|KTHY_ROSCS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|156234977|gb|ABU59760.1| dTMP kinase [Roseiflexus castenholzii DSM 13941] Length = 229 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 112/215 (52%), Gaps = 7/215 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG EG+GK+T LL L + Y V +TREPGGT + R ++L E Sbjct: 3 LFVTFEGPEGSGKSTQARLLYESLYARRYPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+AAR V VIRP L +G I+LCDR+ DS+YAYQG L ++ + Sbjct: 63 TTETLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTYAYQGYGLGRDLAELRTITAAA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY---SLRESACLD----YFERKDVMIHEKRRQIF 177 + PD T LD+ + GL+R + ++ L +D + +++ H++ + Sbjct: 123 TGGLRPDITFYLDISAEDGLERKRRKHPGARLMGQRGVDQEWNRLDARELEYHQRVEAGY 182 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P+R ++D+ S +++A I IV + Sbjct: 183 RALIAQDPERWRVLDARQSIEALAEQIAAIVEPYL 217 >gi|24380041|ref|NP_721996.1| thymidylate kinase [Streptococcus mutans UA159] gi|290579980|ref|YP_003484372.1| putative thymidylate kinase [Streptococcus mutans NN2025] gi|46576564|sp|Q8DSU6|KTHY_STRMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|24378032|gb|AAN59302.1|AE014996_5 putative thymidylate kinase [Streptococcus mutans UA159] gi|254996879|dbj|BAH87480.1| putative thymidylate kinase [Streptococcus mutans NN2025] Length = 212 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 110/211 (52%), Gaps = 5/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M G+FISFEG +GAGKTT + + L++ +V TREPGG AE+ R ++L Sbjct: 1 MTKGIFISFEGPDGAGKTTVLEAILPQLKKLVAKEVITTREPGGVAIAESIRDLILDVNH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ I P L +G ++L DRF+DSS AYQG + Sbjct: 61 TNMDDKTELLLYIAARRQHLVERILPELKKGNLVLVDRFIDSSVAYQGYGRGLDADAVTW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD T+ D+ IGL R++ ++ + + + +H + R +L Sbjct: 121 LNNFATDGLQPDLTLYFDVDSQIGLTRIEKNKE----REVNRLDLEQLDMHRRVRSGYLK 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A+ PDR +D+A + V T+ L I+ + Sbjct: 177 LAQENPDRIVTIDAARPLEEVITDALFIIKQ 207 >gi|94989835|ref|YP_597935.1| thymidylate kinase [Streptococcus pyogenes MGAS10270] gi|94543343|gb|ABF33391.1| Thymidylate kinase [Streptococcus pyogenes MGAS10270] Length = 253 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|254415334|ref|ZP_05029095.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420] gi|196177809|gb|EDX72812.1| thymidylate kinase [Microcoleus chthonoplastes PCC 7420] Length = 213 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 17/219 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-----------DVHVTREPGGTPAAEAARHV 53 + I FEG+EG+GKTT I + + V +TREPGGT R + Sbjct: 1 MLIVFEGVEGSGKTTQIQRSRDWFLSSGILDTLGNYHKPPPVIITREPGGTALGIKLRQL 60 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 LL E +++AA R HVE +++P L G I+LCDR+ DS+ AYQG Sbjct: 61 LLQEQSSSLQHRTELLLYAADRSQHVEELLQPQLDAGAIILCDRYTDSTIAYQGYGRGID 120 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++ + I+ + D T+ LD+ V IGL+R + R D E+ ++ H++ Sbjct: 121 LALIEQINHIATGGLESDLTLWLDVDVTIGLQRARER------GVADRMEQAELTFHQRV 174 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +Q F +A P R +D+ S ++V +I ++ + + Sbjct: 175 QQGFAQLASQHPQRIVRIDANQSPEAVQRDIQAVLRQRI 213 >gi|50902776|gb|AAT86491.1| Thymidylate kinase [Streptococcus pyogenes MGAS10394] Length = 253 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|71802080|gb|AAX71433.1| thymidylate kinase [Streptococcus pyogenes MGAS6180] Length = 253 Score = 250 bits (640), Expect = 9e-65, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|83954240|ref|ZP_00962960.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1] gi|83841277|gb|EAP80447.1| thymidylate kinase [Sulfitobacter sp. NAS-14.1] Length = 212 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFISFEGI+G+GK+T LLK L+ + V +TREPGG+P AE R ++L D + Sbjct: 6 KGLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSPGAEEIRALVLQGDPDRW 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A E ++F AAR DH+E I PAL GKI++CDRF DS+ YQG +D L Sbjct: 66 SARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHS 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + V PD T+++D+ GL R +R ++ E FE + R FL +A Sbjct: 126 LMI-GVEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 PDR ++ A S +VA +++ V + R Sbjct: 180 EFPDRFVTINGAQSIDAVAADVIAQVRPRLDAR 212 >gi|227533730|ref|ZP_03963779.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227188714|gb|EEI68781.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 238 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 113/211 (53%), Gaps = 4/211 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI+FEG +GAGKT+ + L L++ +H+TREPGG +E R V+L Sbjct: 24 MVKGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPAN 83 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AA+R H+ VI+PAL +G I++CDRF+DSS AYQG + Sbjct: 84 TAMDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLK 143 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + P T+ LD+PV +GL R+++ + R+ D +++ + HE+ ++ Sbjct: 144 MNQFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQY---DRLDQESLAFHERVHDAYMT 200 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + P R +D+ + V + Sbjct: 201 LIVDNPQRIVSIDATEPLEKVVAACFQTITR 231 >gi|309792153|ref|ZP_07686625.1| dTMP kinase [Oscillochloris trichoides DG6] gi|308225694|gb|EFO79450.1| dTMP kinase [Oscillochloris trichoides DG6] Length = 230 Score = 250 bits (640), Expect = 1e-64, Method: Composition-based stats. Identities = 78/226 (34%), Positives = 114/226 (50%), Gaps = 11/226 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG+GK+T LL LQ Y V +TREPGGT +E R +++ E Sbjct: 3 LFITFEGSEGSGKSTQARLLYERLQAVGYPVILTREPGGTRISELIRRIVMDLRHTEMAP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+AAR V +IRP L G I+LCDR+ DS++AYQG L ++ ++ Sbjct: 63 TTETLLFSAARAQLVSELIRPYLGTGGIVLCDRYADSTFAYQGYGLGRDLEELQAITTVA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------DYFERKDVMIHEKRR 174 + PD T LDLPV+ GL+R E + + +D+ H++ Sbjct: 123 TGGLQPDLTFYLDLPVEEGLRRKHLAKERAEQNAPGTTLSTPVEWNRLDARDLAYHQRVA 182 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 F D+ R +P R I+ + +A I V L+ KRV+ L Sbjct: 183 AGFADLIRKEPQRWRIIPAEQPIPILAEQIAQEVAPLL-KRVARLG 227 >gi|34499178|ref|NP_903393.1| thymidylate kinase [Chromobacterium violaceum ATCC 12472] gi|46576426|sp|Q7NRQ7|KTHY_CHRVO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|34105029|gb|AAQ61385.1| dTMP kinase [Chromobacterium violaceum ATCC 12472] Length = 212 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 116/213 (54%), Gaps = 7/213 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EGI+GAGK+TH+S ++ +L R D TREPGGTP +E R +LL G Sbjct: 6 RRGRFITLEGIDGAGKSTHLSFIRDWLARHGVDAAFTREPGGTPLSEKIRDLLLDPGTVA 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AEA++ AAR H+ VI PAL G+ L+ DRF DS+YA+QG + +L+ Sbjct: 66 -SLDAEALLAFAARQQHIAEVIEPALAAGRWLVSDRFTDSTYAFQGGGRGVPFERIRALE 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T++ DLP ++ R+ + D FE++ H + R +L A Sbjct: 125 DWVQRGLQPDLTLLFDLPTEVAAGRMAG------TRVPDRFEQEAADFHRRVRAAYLRRA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D++ + +I+ + L+++ Sbjct: 179 EEAPQRIAVLDASRGIADIQADIVLHLERLLER 211 >gi|320547322|ref|ZP_08041613.1| dTMP kinase [Streptococcus equinus ATCC 9812] gi|320448020|gb|EFW88772.1| dTMP kinase [Streptococcus equinus ATCC 9812] Length = 210 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 114/214 (53%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEKVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVKHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSVAYQGAGRGLDKDSIAKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + S PD T+ D+ ++GL R+ ++ + + + +H++ RQ +LD+ Sbjct: 121 NDFSTDGREPDLTLYFDVESEVGLDRIAKNAD----REVNRLDLEKLDMHKRVRQGYLDL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A+ + +R +D++ + V + ++ E + K Sbjct: 177 AQTE-NRIVTIDASRELEQVVADATQVILERLAK 209 >gi|254252184|ref|ZP_04945502.1| Thymidylate kinase [Burkholderia dolosa AUO158] gi|124894793|gb|EAY68673.1| Thymidylate kinase [Burkholderia dolosa AUO158] Length = 206 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ L++ L V VTREPGGT E R ++L+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLNWFCERLQQKLAAAGRHVVVTREPGGTQLGETLRDIVLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---APDKFESESDAFFARTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFVIVDATQSIAEIRQQLERVLAAL 206 >gi|83319417|ref|YP_424009.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|123536025|sp|Q2STA4|KTHY_MYCCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|83283303|gb|ABC01235.1| thymidylate kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 213 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 120/210 (57%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG + + +Q+I Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVSEVQQIV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ D+ KR+Q R + + ++++ +K Q +L++ +N Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----SSKNRLDKEENNFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+ V + I+ E +++ Sbjct: 177 PKRIKVIDANKDIDQVYNQAIKIILEKLKE 206 >gi|118586633|ref|ZP_01544073.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163] gi|118432948|gb|EAV39674.1| thymidylate kinase [Oenococcus oeni ATCC BAA-1163] Length = 213 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 5/217 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI+ EG +GAGKT+ + L L+ ++ TREPGG +EA R ++L Sbjct: 1 MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA++FAAAR H+ I PAL +GKI+L DRF+DSS AYQG + Sbjct: 61 PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQGGGRELGIEAVSE 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + P+ T++LDLP ++G+ R+ S ++ ++ ++ H+K RQ +L Sbjct: 121 INNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQTYLQ 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +A++QP+R ++D+ S + +A N L ++ E ++ + Sbjct: 177 LAKDQPNRIKVLDATQSPEKIAINALQLIQESLKGWI 213 >gi|325962187|ref|YP_004240093.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3] gi|323468274|gb|ADX71959.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3] Length = 231 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 115/211 (54%), Gaps = 5/211 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLFI+FEG +GAGK+T +LL L+ + V TREPGGTP E R ++L G Sbjct: 5 RSGLFIAFEGGDGAGKSTQAALLAETLEARGLAVLRTREPGGTPIGEKLRSLVLDHGHGL 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAA+R H VIRPAL G+++L DR++DSS AYQG + + SL Sbjct: 65 IDAHTEALIFAASRAAHASQVIRPALERGEVVLTDRYIDSSVAYQGAGRALGEDAVRSLN 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + P T++LD+ +G R A D E + H + R FLD+A Sbjct: 125 EWATSGLQPHLTVLLDVDPAVGRSR-----RTAGDAAEDRMESEADEFHARIRDAFLDLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +P+ ++ + H +++ IL V L+ Sbjct: 180 RRRPESYLVLPAHHPVSELSSRILARVDALL 210 >gi|307709124|ref|ZP_07645583.1| thymidylate kinase [Streptococcus mitis SK564] gi|307620070|gb|EFN99187.1| thymidylate kinase [Streptococcus mitis SK564] Length = 212 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K +V TREPGG E R V+L Sbjct: 1 MSIGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIDAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NHFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +R +D++ + V ++++ + Sbjct: 177 LDKEGNRIVKIDASLPLEQVVETTKAVLFDRM 208 >gi|297587209|ref|ZP_06945854.1| thymidylate kinase [Finegoldia magna ATCC 53516] gi|297575190|gb|EFH93909.1| thymidylate kinase [Finegoldia magna ATCC 53516] Length = 203 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 7/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GK+T I + +L NYDV TREPGG+P AE R+++L + G Sbjct: 1 MFITFEGPDGSGKSTIIQKVYDYLIENNYDVIKTREPGGSPIAEKIRNLILDTENTKMGY 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I PAL E KI+LCDRFL SS AYQG + + E + Sbjct: 61 RTEALLYAASRAQHVEETILPALNENKIVLCDRFLISSLAYQGVGRDLGIENVRKINEFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V PD + D+ LKR + D E++ HE+ + +I ++ Sbjct: 121 INGVYPDFVLFFDVDPITTLKRKSS------LDTADRLEKEGNNFHERVYNGYKEILNSE 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 + I+D+ S + V + + ++ Sbjct: 175 KN-IEIIDATQSVEDVFSQCIKVLKR 199 >gi|126736701|ref|ZP_01752440.1| thymidylate kinase [Roseobacter sp. CCS2] gi|126713816|gb|EBA10688.1| thymidylate kinase [Roseobacter sp. CCS2] Length = 202 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 75/206 (36%), Positives = 108/206 (52%), Gaps = 6/206 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+FEGI+G+GK+T L+ + DV +TREPGG+P AE R ++L+ D Sbjct: 1 MNKPRFITFEGIDGSGKSTQSRRFADHLRAQGGDVVLTREPGGSPGAEEIRQLVLTGDPD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E E ++F A+R DH+E I PAL GK ++ DRF DS+ YQG +DSL Sbjct: 61 RWSPETEILLFTASRRDHLEKTIEPALTAGKTVISDRFADSTRVYQGATRGDLRAMVDSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T I+D+ L+R R S D FE + E R FL + Sbjct: 121 HRLMI-AREPDLTFIIDMDPATALERGLARKS-----GEDRFEDFGLGFQETLRHGFLAL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 A + P RC ++D + +A+ I Sbjct: 175 AHDHPKRCVLIDGNRTPDQIASEIAA 200 >gi|42560606|ref|NP_975057.1| thymidylate kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|59798304|sp|Q6MUI5|KTHY_MYCMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|42492102|emb|CAE76699.1| THYMIDYLATE KINASE [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320609|gb|ADK69252.1| dTMP kinase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 213 Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 118/210 (56%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTTLLKVKEELERLNYQVLITREPGGEAIAEQIRQIILDNKNRDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F A+R H++ VI+PAL + I++ DRF+DS+ AYQG + ++ +Q+I Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ D+ KR+Q R + + + +K Q +L++ +N Sbjct: 121 LKNCLPDLTLFFDVSFSEAEKRMQIRGE----NSKNRLDEEKSDFKQKVYQGYLELVKNN 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D+ V + I+ E +++ Sbjct: 177 PKRIKVIDANQDIDQVYNQAIKIILEKLKE 206 >gi|254670330|emb|CBA05726.1| Thymidylate kinase [Neisseria meningitidis alpha153] Length = 206 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 70/203 (34%), Positives = 118/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R I+DS S V +I ++ Sbjct: 178 ERYAIIDSNRSLDEVRNSIEKVL 200 >gi|169351616|ref|ZP_02868554.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552] gi|169291838|gb|EDS73971.1| hypothetical protein CLOSPI_02396 [Clostridium spiroforme DSM 1552] Length = 206 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 114/210 (54%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +G+GKTT ++ L + Y V +TREPGG AE R ++L Sbjct: 2 RGKFITLEGPDGSGKTTISKIVFDQLMAEGYKVLLTREPGGIDIAEQIRAIILDKKNIAM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ I PAL +G +++CDRF+DSS YQG + + + Sbjct: 62 EARTEALLYAAARRQHLIEKIEPALNDGYLVICDRFIDSSLVYQGVARNIGIDEVYQINL 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +V PD TI D+P +IGL+R+ + D + + H+K + ++ I Sbjct: 122 FAIGDVFPDTTIFFDIPYEIGLERINKNH-----RDTDRLDLESNDFHKKVYEGYMSICE 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +D++ S VA+ +++I+ +++ Sbjct: 177 KYADRITKIDASKSIDEVASQVIDIIKKII 206 >gi|13470654|ref|NP_102223.1| thymidylate kinase [Mesorhizobium loti MAFF303099] gi|23821805|sp|Q98MV4|KTHY_RHILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|14021396|dbj|BAB48009.1| thymidylate kinase [Mesorhizobium loti MAFF303099] Length = 224 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 101/215 (46%), Positives = 136/215 (63%), Gaps = 2/215 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EGAGK+T I L R + K YDV +TREPGG+P AEA RHVLLS + Sbjct: 1 MARGFFITFEGGEGAGKSTQIERLARKMHAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG + EA++FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+ +L Sbjct: 61 PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++I++ +MPD T+I D+ GL+R R A D FE++ + IH+ RR FL I Sbjct: 121 EQIAINGMMPDMTLIFDIDPAEGLRRATLRRGSD--AGADRFEKETLAIHQARRAAFLAI 178 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A +P+RC +VD++ +V + V+ ++ R Sbjct: 179 AAAEPERCIVVDASADPNTVEDVVTAAVFAALEAR 213 >gi|227550403|ref|ZP_03980452.1| thymidylate kinase [Enterococcus faecium TX1330] gi|257888432|ref|ZP_05668085.1| thymidylate kinase [Enterococcus faecium 1,141,733] gi|257897193|ref|ZP_05676846.1| thymidylate kinase [Enterococcus faecium Com12] gi|257899191|ref|ZP_05678844.1| thymidylate kinase [Enterococcus faecium Com15] gi|293379610|ref|ZP_06625747.1| dTMP kinase [Enterococcus faecium PC4.1] gi|293572059|ref|ZP_06683070.1| thymidylate kinase [Enterococcus faecium E980] gi|227180462|gb|EEI61434.1| thymidylate kinase [Enterococcus faecium TX1330] gi|257824486|gb|EEV51418.1| thymidylate kinase [Enterococcus faecium 1,141,733] gi|257833758|gb|EEV60179.1| thymidylate kinase [Enterococcus faecium Com12] gi|257837103|gb|EEV62177.1| thymidylate kinase [Enterococcus faecium Com15] gi|291607844|gb|EFF37155.1| thymidylate kinase [Enterococcus faecium E980] gi|292641759|gb|EFF59932.1| dTMP kinase [Enterococcus faecium PC4.1] Length = 214 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 2 NGLFITIEGPDGAGKTSILNELFPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 62 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R++ +D + + + H++ R +L +A Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R H VD+ SF+ V + + E Sbjct: 178 EENPERIHKVDARKSFEEVLQTSYHTIIE 206 >gi|94993722|ref|YP_601820.1| thymidylate kinase [Streptococcus pyogenes MGAS10750] gi|94547230|gb|ABF37276.1| Thymidylate kinase [Streptococcus pyogenes MGAS10750] Length = 253 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 43 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 102 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 103 TTMDPKTELLLYIAARRQHLVEKVLPALEAGRLVFIDRFIDSSVAYQGAGRGLIKADIQW 162 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 163 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 218 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 219 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 251 >gi|293550622|ref|ZP_06673290.1| thymidylate kinase [Enterococcus faecium E1039] gi|291603243|gb|EFF33427.1| thymidylate kinase [Enterococcus faecium E1039] Length = 214 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ ++ L L+ ++ TREPGG P AE R V+L D Sbjct: 2 NGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GKI+LCDRF+DSS AYQG + L Sbjct: 62 MDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R++ +D + + + H++ R +L +A Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIKKN----RQNQIDRLDSEGLEFHQRVRHAYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R H VD+ F+ V + + E Sbjct: 178 EENPERIHKVDARKGFEEVLQTSYHTIIE 206 >gi|294791185|ref|ZP_06756342.1| dTMP kinase [Scardovia inopinata F0304] gi|294457656|gb|EFG26010.1| dTMP kinase [Scardovia inopinata F0304] Length = 216 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 108/212 (50%), Gaps = 10/212 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEG++G GKTT + LK +L + V +TREPGGT E R +LL + Sbjct: 13 GLFVTFEGVDGVGKTTQATRLKNYLIHQGRQVLITREPGGTHLGEQIRQLLLHGDDEA-- 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AA+R V IRPAL GK+++ DR++DSS AYQ + L E Sbjct: 71 PRTEALLYAASRAQLVFQEIRPALNMGKVVISDRYIDSSLAYQAGGRELTMEQIRQLNEW 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P T +LD+ + R+ S D E + RQ FLD+A Sbjct: 131 ATNGLWPQRTYLLDMDFEQAQARL--------SGPKDRLESSGADFFNRTRQAFLDLAGQ 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +PDR I++++ S V + + L+ +R Sbjct: 183 EPDRFVILNASLSVDQVWDAVKADIDSLLARR 214 >gi|220906428|ref|YP_002481739.1| dTMP kinase [Cyanothece sp. PCC 7425] gi|254808287|sp|B8HXT9|KTHY_CYAP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219863039|gb|ACL43378.1| dTMP kinase [Cyanothece sp. PCC 7425] Length = 234 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 15/224 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-------------YDVHVTREPGGTPAAEA 49 G I FEG EG+GKTT + +++L+ + VTREPGGT Sbjct: 2 KGKLIVFEGGEGSGKTTQLQRSRQWLESSGWLARLQQTLPTLAKPLLVTREPGGTALGIK 61 Query: 50 ARHVLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 R +LL+ ++ + E ++FAA R HV ++P L G ++LCDRF DS+ AYQG Sbjct: 62 LRQLLLNSDPEDVIQSRTELLLFAADRAQHVATRLQPHLEAGGLILCDRFTDSTVAYQGY 121 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +D L +I+ + D T+ LDL V++GL+R + R + LD ER ++ Sbjct: 122 GRGLSLALIDQLNQIATDGLTSDLTLWLDLDVEMGLERSRQRLQ-QSGGGLDRIERGEIA 180 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 H++ +Q F +++ P+R +D++ VA I I+ E + Sbjct: 181 FHQRVQQGFRALSQAAPERIVTIDASQPEAMVADKIQRILEEKL 224 >gi|121594087|ref|YP_985983.1| thymidylate kinase [Acidovorax sp. JS42] gi|171769451|sp|A1W6N2|KTHY_ACISJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120606167|gb|ABM41907.1| thymidylate kinase [Acidovorax sp. JS42] Length = 217 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 115/216 (53%), Gaps = 17/216 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEGI+GAGK++HI L + L+ + V +TREPGGTP AE R +LL D Sbjct: 1 MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVALTREPGGTPLAEKLREMLLH---D 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA++ AAR DH+ VI PAL G+++LCDRF D+++AYQG L + Sbjct: 58 SMDALTEALLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117 Query: 121 QEISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ V PD T+ D+P ++ +R+ + D FE + V + Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQRLSA------ARAPDRFESQPVEFFTR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + D A P R +DS+ + VA + +V Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207 >gi|28811733|dbj|BAC64665.1| putative thymidylate kinase [Streptococcus pyogenes SSI-1] Length = 232 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 22 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 81 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 82 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 197 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230 >gi|228476228|ref|ZP_04060931.1| dTMP kinase [Staphylococcus hominis SK119] gi|228269713|gb|EEK11212.1| dTMP kinase [Staphylococcus hominis SK119] Length = 205 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT ++ + + L +NY+V TREPGG E R++LL + Sbjct: 4 FITFEGPEGSGKTTVLNQINKLL-SENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL K++LCDR++DSS AYQG + + E ++ Sbjct: 61 TEALLFAASRREHLVEKVIPALKNNKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++ + H+K + + + + P Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +VD+ S +SV +N I+ ++ Sbjct: 176 ERFKVVDATQSIESVISNTYEIILSYLK 203 >gi|306827929|ref|ZP_07461196.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782] gi|304429848|gb|EFM32890.1| thymidylate kinase [Streptococcus pyogenes ATCC 10782] Length = 232 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 22 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 81 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 82 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 141 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 142 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 197 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 198 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 230 >gi|148244374|ref|YP_001219068.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA] gi|166223127|sp|A5CXH6|KTHY_VESOH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146326201|dbj|BAF61344.1| thymidylate kinase [Candidatus Vesicomyosocius okutanii HA] Length = 205 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ +G+EGAGK+T I + +L +KN +V +TREPGGT E R +LLS Sbjct: 1 MQRGKFITIDGVEGAGKSTQIDFICSYLAKKNINVVLTREPGGTKLGEKIRALLLSIDTQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR +H++ I PAL G +L DRF D+SYAYQG + L Sbjct: 61 LMDNDTELLLIFAARNEHIKTKIIPALNRGDWVLSDRFTDASYAYQGGGRGLSIERIALL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +Q+ PD T++LD+PV +G+ R+++R D E + + R ++ Sbjct: 121 EQWVLQDFSPDVTLLLDVPVALGMLRIKSRSRK------DRIELETNDFFNRVRDSYIKR 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P+R ++D++ + + I I+ L Sbjct: 175 SKQFPERIKLIDASQTLKETTQQIKVILQAL 205 >gi|239998426|ref|ZP_04718350.1| thymidylate kinase [Neisseria gonorrhoeae 35/02] gi|268594287|ref|ZP_06128454.1| thymidylate kinase [Neisseria gonorrhoeae 35/02] gi|268547676|gb|EEZ43094.1| thymidylate kinase [Neisseria gonorrhoeae 35/02] gi|317163711|gb|ADV07252.1| thymidylate kinase [Neisseria gonorrhoeae TCDC-NG08107] Length = 206 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 116/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+G GK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGVGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------AREKDRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS S V +I ++ Sbjct: 178 ERYAVIDSNRSLDEVRNSIEKVL 200 >gi|167747824|ref|ZP_02419951.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662] gi|317473408|ref|ZP_07932702.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA] gi|167653186|gb|EDR97315.1| hypothetical protein ANACAC_02546 [Anaerostipes caccae DSM 14662] gi|316899058|gb|EFV21078.1| thymidylate kinase [Anaerostipes sp. 3_2_56FAA] Length = 216 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 6/211 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EG +GAGK+T I LL+ +L +K YD+ V REPGGT +EA R V+L+ G Sbjct: 7 GIFITMEGPDGAGKSTQIDLLRVYLLQKGYDIIVCREPGGTVISEAIREVILNRDYKNMG 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++AAAR VE VI+PAL +GK+++CDRF++SS YQG + + Sbjct: 67 HMTELLLYAAARAQLVEEVIQPALDQGKVVICDRFIESSAVYQGIARGLGVDLVYEVNRF 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V MPD T++LD+ + G+ R + A LD E + + H K + + +A Sbjct: 127 AVGNTMPDITLLLDVDAETGIGRKKQ------QAELDRMESEKLEFHRKVVEGYRLLAER 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R +D +S + + I V + + + Sbjct: 181 DKNRMVKIDGRNSIEEIHRQIKVAVDDALTR 211 >gi|116491390|ref|YP_810934.1| thymidylate kinase [Oenococcus oeni PSU-1] gi|290890956|ref|ZP_06554020.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429] gi|122276428|sp|Q04E53|KTHY_OENOB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116092115|gb|ABJ57269.1| thymidylate kinase [Oenococcus oeni PSU-1] gi|290479355|gb|EFD88015.1| hypothetical protein AWRIB429_1410 [Oenococcus oeni AWRIB429] Length = 213 Score = 249 bits (638), Expect = 2e-64, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 5/217 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI+ EG +GAGKT+ + L L+ ++ TREPGG +EA R ++L Sbjct: 1 MKKGFFITIEGPDGAGKTSLLDNLMPALRDIFGDNLIETREPGGVRISEAIRKIVLGLKY 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA++FAAAR H+ I PAL +GKI+L DRF+DSS AYQG + Sbjct: 61 PEMNRRTEALLFAAARAQHMVEKIEPALADGKIVLSDRFVDSSIAYQGGGRELGIEAVGE 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + P+ T++LDLP ++G+ R+ S ++ ++ ++ H+K RQ +L Sbjct: 121 INNFATNGLQPNLTLLLDLPSEVGIARIMK----HRSDEVNRLDKDRLVFHKKVRQTYLQ 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +A++QP+R ++D+ S + +A N L ++ E ++ + Sbjct: 177 LAKDQPNRIKVLDATQSPEKIAINALQLIQESLKGWI 213 >gi|148255489|ref|YP_001240074.1| thymidylate kinase [Bradyrhizobium sp. BTAi1] gi|166221722|sp|A5EJ24|KTHY_BRASB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146407662|gb|ABQ36168.1| thymidylate kinase [Bradyrhizobium sp. BTAi1] Length = 226 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 89/210 (42%), Positives = 129/210 (61%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++FEG EGAGK+T I +L L+ + V +TREPGG+P AE RH++LS Sbjct: 12 RGRFVTFEGGEGAGKSTQIKMLAARLESEGMRVVLTREPGGSPGAEIMRHLVLSGMGKLL 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GAEAE ++FAAAR DHV NVI PAL +G +LCDRF DS+ AYQG L+++Q Sbjct: 72 GAEAETLLFAAARDDHVRNVILPALSQGSWVLCDRFFDSTRAYQGSLGKVAPDVLNAMQR 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ ++ PD T+ILD+PV++GLK + R + D FE +D+ H+ R F IA Sbjct: 132 VTIGDLKPDLTLILDVPVEVGLK---RAAARRGAGAPDRFEAEDIKFHKGLRDAFHKIAD 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P RC ++D+ V+ + + V E + Sbjct: 189 DDPKRCVLIDATAGPDPVSLLVWDAVRERL 218 >gi|223939277|ref|ZP_03631158.1| dTMP kinase [bacterium Ellin514] gi|223892109|gb|EEF58589.1| dTMP kinase [bacterium Ellin514] Length = 213 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 114/213 (53%), Gaps = 2/213 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GV 59 M GL ISFEG EG GK+T ISLL L+ + + + REPGGTP E R+ L Sbjct: 1 MKKGLLISFEGTEGCGKSTQISLLTERLRALGHVIRMVREPGGTPIGEEIRYTLKHSVKN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +EAE ++ A+R V V+RPAL G+I++CDR+ DS+ AYQG + + Sbjct: 61 HAMTSEAELLLMNASRAQLVREVLRPALEAGEIIVCDRYYDSTTAYQGYGRGLDLKLVQA 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +V + PD T++L +P ++ R+ +R + D E D + Q + Sbjct: 121 VIDFAVGDTRPDLTLLLRVPPEVSAARLASRQATLPFIR-DRIEEADQSFFNRVSQGYEA 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A P+R +D++ S Q+V+ +I + V L+ Sbjct: 180 LATAHPERIQTIDASSSVQNVSDSIWSRVKPLL 212 >gi|222111179|ref|YP_002553443.1| thymidylate kinase [Acidovorax ebreus TPSY] gi|221730623|gb|ACM33443.1| thymidylate kinase [Acidovorax ebreus TPSY] Length = 217 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 17/216 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+FEGI+GAGK++HI L + L+ + V +TREPGGTP AE R +LL D Sbjct: 1 MTNGAFITFEGIDGAGKSSHIDALAQALRAAGHTVTLTREPGGTPLAEKLREMLLH---D 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E ++ AAR DH+ VI PAL G+++LCDRF D+++AYQG L + Sbjct: 58 SMDALTETLLVFAARRDHLRCVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLEVLSYM 117 Query: 121 QEISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ V PD T+ D+P ++ +R+ + D FE + V + Sbjct: 118 ERLAQTGVGLQPDLMRNPDLTLWFDVPPEVAAQRLSA------ARAPDRFESQPVEFFTR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + D A P R +DS+ + VA + +V Sbjct: 172 VARGYADRAAGAPQRFARIDSSQPREQVAAQLRAVV 207 >gi|163746821|ref|ZP_02154178.1| thymidylate kinase [Oceanibulbus indolifex HEL-45] gi|161379935|gb|EDQ04347.1| thymidylate kinase [Oceanibulbus indolifex HEL-45] Length = 214 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 121/211 (57%), Gaps = 6/211 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLF++FEGI+G+GK+T LL L + +DV +TREPGG+P AE R ++L D Sbjct: 9 RSGLFVTFEGIDGSGKSTQARLLADHLTAQGHDVVLTREPGGSPGAEEIRALVLQGDPDR 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A+ E ++F AAR DH+E IRPAL GKI++CDRF DS+ YQG +D L Sbjct: 69 WSAQTEILLFTAARRDHLERTIRPALDAGKIVICDRFADSTRMYQGLSRGDLRQMVDDLH 128 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD T+++D+ GL+R +R + E FE V + + R FL++A Sbjct: 129 ALMI-GVEPDLTVLIDMDPANGLERALSRQTAEE-----RFEDFGVELQAQMRAGFLNLA 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + DR H++D +VA ++ V + Sbjct: 183 KEFSDRFHVIDGGREIDTVARDVTATVAARL 213 >gi|56808246|ref|ZP_00366017.1| COG0125: Thymidylate kinase [Streptococcus pyogenes M49 591] gi|209558885|ref|YP_002285357.1| thymidylate kinase [Streptococcus pyogenes NZ131] gi|229621844|sp|B5XK00|KTHY_STRPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|209540086|gb|ACI60662.1| Thymidylate kinase [Streptococcus pyogenes NZ131] Length = 211 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLTKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREINRLDLETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|298491750|ref|YP_003721927.1| thymidylate kinase ['Nostoc azollae' 0708] gi|298233668|gb|ADI64804.1| thymidylate kinase ['Nostoc azollae' 0708] Length = 209 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGVDE 61 SG I FEG+EG GKTT + L ++L+ + +T EPGGT R +LL + Sbjct: 2 SGKLIVFEGVEGCGKTTQMHLCSQWLRDLSVSFSLTCEPGGTELGTHLRQLLLENSEDKP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +++ A R H+E ++P L +GK +LCDR+ DS+ AYQG ++ L Sbjct: 62 ISEITELLLYGADRAQHIEQELKPNLADGKYILCDRYTDSTIAYQGYGRGLSMSIINQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ + D TI LD+ V++GL R R+ A LD E++ + H + +Q + ++A Sbjct: 122 YIATGGLESDLTIWLDIDVEVGLARK------RDQATLDRIEQETIAFHRRVQQGYTELA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R VD + S ++V I I+ + Sbjct: 176 ATHPSRIFRVDGSLSKETVQQRIQEILNAHL 206 >gi|209517025|ref|ZP_03265873.1| dTMP kinase [Burkholderia sp. H160] gi|209502556|gb|EEA02564.1| dTMP kinase [Burkholderia sp. H160] Length = 206 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 105/212 (49%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ + L+ K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRAVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DLP + +R + D FE + E+ R Sbjct: 118 LEALERWVQGGFQPDLTVLFDLPPAVANERRSA------ARNPDRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ A P R I+DS+ S + + ++ Sbjct: 172 YMRRAEEAPHRFAIIDSSQSIARIQKQLDELI 203 >gi|319936704|ref|ZP_08011117.1| thymidylate kinase [Coprobacillus sp. 29_1] gi|319808261|gb|EFW04826.1| thymidylate kinase [Coprobacillus sp. 29_1] Length = 207 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 117/210 (55%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EG+GKTT +++K L ++ Y V +TREPGG AE R ++ Sbjct: 2 SGKFITFEGGEGSGKTTIAAMVKEVLDKEGYRVTLTREPGGVEIAEKIRDIIHDVKYTNM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AA+R H+ + PAL +G+I++CDRF+DSS YQG + ++ Sbjct: 62 DRKTEALLYAASRRQHLVEKVIPALEKGEIVICDRFVDSSMVYQGLARGIGIDEVYNMNL 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + ++P+ T+ D+ ++GL+RV ++ + +++ HE+ + +L I Sbjct: 122 FATENILPNRTVFFDIKPEVGLQRVYANKE----REVNRLDLENIDFHERVYEGYLTICN 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD++ + V +L + E++ Sbjct: 178 RFPERIVKVDASQDIEDVLFQVLEKIREIL 207 >gi|328956615|ref|YP_004374001.1| thymidylate kinase [Carnobacterium sp. 17-4] gi|328672939|gb|AEB28985.1| thymidylate kinase [Carnobacterium sp. 17-4] Length = 211 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 113/212 (53%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG +GAGKT+ I L L + D+ TREPGG+ AE R ++L+ E Sbjct: 2 KGTFITIEGPDGAGKTSVIKKLIPMLVKAVQQDIVATREPGGSRIAEEIRELILNPTNTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R H+ I PAL GK+++CDRF+DSS AYQG + + Sbjct: 62 MDIRTEALLYAAGRRQHLVEKIIPALKAGKVVVCDRFVDSSLAYQGVARGIGISEVAEIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + + PD T+ LD+ GL+R+ +E+ D +++ + HEK R +L IA Sbjct: 122 QFATENLSPDLTLYLDIEAHAGLERIN---LNKENRQFDRLDQETLEFHEKVRSAYLKIA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +D++ ++V ++ E ++ Sbjct: 179 NEHTERIVQIDASQDLETVVEQCYQVIIEKLR 210 >gi|298369193|ref|ZP_06980511.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314] gi|298283196|gb|EFI24683.1| dTMP kinase [Neisseria sp. oral taxon 014 str. F0314] Length = 211 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 8/209 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ +GI+GAGK+T+++++K++ + + V TREPGGTP EA R +LL+ Sbjct: 1 MNP-RFITLDGIDGAGKSTNLAVMKQWFEARRLPVLFTREPGGTPTGEALREILLNPETK 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G E ++ AAR H+E+VI PAL G ++ DRF D+++AYQG +++L Sbjct: 60 A-GLRTETLLMFAARQQHLEDVILPALKNGIHVVSDRFTDATFAYQGGGRGVPLQDIETL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T++LD+P+++ L+R+ D FER+ + R + Sbjct: 119 ENWVQGSFRPDLTLLLDVPLEVSLERIG------RVREKDRFEREQADFFTRVRNAYFSR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 A P+R ++D S ++V T+I + Sbjct: 173 AAANPERYAVIDGNRSPEAVRTSIEAALE 201 >gi|288958657|ref|YP_003448998.1| dTMP kinase [Azospirillum sp. B510] gi|288910965|dbj|BAI72454.1| dTMP kinase [Azospirillum sp. B510] Length = 229 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 120/214 (56%), Gaps = 9/214 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLK----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 G I+ EG EGAGK+T + L L+ + + TREPGG+P AE R +L++ Sbjct: 10 RGRLITLEGGEGAGKSTQLRRLAGRLRETLRARGAGLVTTREPGGSPGAEEIRALLVTGE 69 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + EA++ +AAR DH+E + PAL G +LCDRFLDS+ AYQG ++ Sbjct: 70 TGRWSPVTEALLHSAARRDHLERTVWPALETGDWVLCDRFLDSTMAYQGYGLGLGRALVE 129 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++Q ++ + PD T+ILD+ V+ GL+R R+ D +ER D+ H++ R FL Sbjct: 130 TVQRAALGDFRPDLTLILDIEVEKGLRRAVARH-----GGEDRYERMDIGFHQRLRDGFL 184 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DIAR +PDRC +VD+ +V + + V + Sbjct: 185 DIARREPDRCAVVDADADPDTVQARVWDAVSGRL 218 >gi|256826256|ref|YP_003150216.1| thymidylate kinase [Kytococcus sedentarius DSM 20547] gi|256689649|gb|ACV07451.1| thymidylate kinase [Kytococcus sedentarius DSM 20547] Length = 213 Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++ EG +GAGK+T I LL L Q +V VTREPGGT R +LL D Sbjct: 7 GLFVALEGGDGAGKSTQIRLLVEHLAGQHAGREVVVTREPGGTDLGRRIRELLLHG--DH 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA++FAA R HVE+++RPAL G +++ DR++DSS AYQG + + S+ Sbjct: 65 VAPRAEALLFAADRAHHVESLVRPALDRGAVVVGDRYVDSSIAYQGAGRDLDAVEVASIS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++PD T++LD+ G R A D E + HE+ RQ FLD+A Sbjct: 125 RWATEGLVPDLTVLLDVDPATGRSR--------RGAEHDRLEAEPTAFHERVRQHFLDLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R ++D++ Q + + V L++ Sbjct: 177 AAAPQRYLVLDASRPPQELGAEVARAVDGLLE 208 >gi|254804548|ref|YP_003082769.1| Thymidylate kinase [Neisseria meningitidis alpha14] gi|254668090|emb|CBA04608.1| Thymidylate kinase [Neisseria meningitidis alpha14] gi|325127822|gb|EGC50730.1| thymidylate kinase [Neisseria meningitidis N1568] Length = 206 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 118/203 (58%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS + V +I ++ Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200 >gi|50085662|ref|YP_047172.1| thymidylate kinase [Acinetobacter sp. ADP1] gi|59798252|sp|Q6F9B5|KTHY_ACIAD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49531638|emb|CAG69350.1| thymidylate kinase [Acinetobacter sp. ADP1] Length = 202 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I L + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKLYEHFEASGKQVVLTREPGGTPLAEQIRSLLLAVNHDEPMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ E ++ AAR H++ VI PAL + K++L DRF D+SYAYQ L++L + Sbjct: 61 SDTELLLMYAARAQHLQQVIVPALADEKLVLSDRFTDASYAYQCVGRGLSKDKLNTLNQT 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T LD P+++G+ R + R LD FE++ V ++ RQ + + Sbjct: 121 FV-SHMPDITFWLDAPIELGMSRARER------GALDRFEQEKVEFFQRVRQGYQQLHEL 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +D+ + + V L + LV Sbjct: 174 YPERIKRLDATQAPEIVFQEALEHIQALV 202 >gi|20806623|ref|NP_621794.1| thymidylate kinase [Thermoanaerobacter tengcongensis MB4] gi|23821773|sp|Q8RDE6|KTHY_THETN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|20515069|gb|AAM23398.1| Thymidylate kinase [Thermoanaerobacter tengcongensis MB4] Length = 208 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 117/211 (55%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G GKTT + LL+ L+++ YD+ V REPGGT E R +LL + Sbjct: 2 RGKFISFEGIDGCGKTTQVKLLEEHLKKEGYDLLVLREPGGTRVGEKVREILLD-RENLI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++A++R VE I PAL +G++++ DRF+DSSY YQG + + E Sbjct: 61 FPVTEMLLYASSRAQLVEEKILPALSKGQMVIVDRFIDSSYVYQGYARGLGLEKVKIVNE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + + PD T+ +D+ + +KR R+ D E +D H+K R+ +L + + Sbjct: 121 IATKGLFPDITVYIDITPEEAIKR-------RQGKKADRLEGEDYEFHKKVREGYLRLVK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P+R ++D +V ++ V E ++ Sbjct: 174 DFPERFILIDGMQEVLAVHKMVVKAVEEYLK 204 >gi|238027001|ref|YP_002911232.1| thymidylate kinase [Burkholderia glumae BGR1] gi|237876195|gb|ACR28528.1| Thymidylate kinase [Burkholderia glumae BGR1] Length = 206 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ L+ K V TREPGGT EA R +LL Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFCEHLRAKIAPAGRQVVQTREPGGTVLGEALRALLL- 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 60 --EQPMDLETEALLMFAGRREHLARVIEPALTRGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+P ++ +R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPEVASER---RGAVR---APDKFESESEAFFLRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFLIVDATQSIPQIQRQLEGVLAAL 206 >gi|307706440|ref|ZP_07643249.1| thymidylate kinase [Streptococcus mitis SK321] gi|307618150|gb|EFN97308.1| thymidylate kinase [Streptococcus mitis SK321] Length = 212 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 109/212 (51%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G +S EG EGAGKT+ + L L+ K V TREPGG E R V+L+ Sbjct: 1 MSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVVVLRTREPGGVLIGEKIREVILNPSHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E +++ A+R H+ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 61 QMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ D+ V+ GL R+ ++ + + + +H+K RQ +L + Sbjct: 121 NQFATDGLKPDLTLYFDIEVEEGLARIAANSD----REVNRLDLEGLDLHKKVRQGYLSL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +D++ + V ++++ + Sbjct: 177 LDKEGSRIVKIDASFPLEQVVETTKAVLFDRM 208 >gi|186475808|ref|YP_001857278.1| thymidylate kinase [Burkholderia phymatum STM815] gi|229487611|sp|B2JGP7|KTHY_BURP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|184192267|gb|ACC70232.1| dTMP kinase [Burkholderia phymatum STM815] Length = 206 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ + L++K V +TREPGGT E+ R +LL Sbjct: 1 MARGKFITFEGIDGAGKTTHLGWFRDRLEQKVAPAGRSVVMTREPGGTKLGESLRDILLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ AAR +H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 ---EAMDLETEALLMFAARREHLAQVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+P D +R + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPDTASERRSA------ARAPDRFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R I+DS S + + +++ L Sbjct: 172 YLRRAEEAPYRFAIIDSTRSIADIQKQLEDLIASL 206 >gi|237746052|ref|ZP_04576532.1| thymidylate kinase [Oxalobacter formigenes HOxBLS] gi|229377403|gb|EEO27494.1| thymidylate kinase [Oxalobacter formigenes HOxBLS] Length = 210 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 9/208 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+GAGK+THI + L+ KN V +TREPGGT E R +LL D+ Sbjct: 11 GRFITFEGIDGAGKSTHIDYVTGLLKAKNRQVVLTREPGGTGLGEKLREILLH---DKMT 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E EA++ AAR +H+ ++I PAL G+ +L DRF D+S+AYQG L L+ Sbjct: 68 PETEALLMFAARREHLADIIEPALRRGEWVLSDRFTDASFAYQGGGRGLAREKLRQLETW 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T + D+ DI R++ + D FER+ + R +L A+ Sbjct: 128 VHPHLQPDLTFLFDVSPDIAQTRLEA------ARSPDKFEREKADFFNRVRGEYLRRAKE 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R I+DS+ ++ + ++ +L Sbjct: 182 FPERFRIIDSSRPIAAIRETLKTLIGKL 209 >gi|322372419|ref|ZP_08046955.1| dTMP kinase [Streptococcus sp. C150] gi|321277461|gb|EFX54530.1| dTMP kinase [Streptococcus sp. C150] Length = 209 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GL IS EG +GAGKT+ + L L+ V TREPGG AE R V+L Sbjct: 1 MSKGLLISIEGPDGAGKTSVLEALLPRLKEVYPGQVITTREPGGVAIAEQIREVILDVDN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A+ E +++ AAR H+ + P L +G +++ DRF+DSS AYQG + Sbjct: 61 TAMDAKTELLLYIAARRQHLVEKVLPELEKGNMVIMDRFIDSSVAYQGAGRGLDQTEIAW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD T++ D+ + GLKR+ ++ + + + +H++ R+ +LD Sbjct: 121 LNAYATDGHKPDVTLLFDVDSETGLKRIAANGE----REVNRLDLEKLDMHQRVRKGYLD 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A +P+R ++D++ F V + I+ + Sbjct: 177 LAMVEPERIKLIDASQPFDKVIEDAWQIIKSYL 209 >gi|99078562|ref|YP_611820.1| thymidylate kinase [Ruegeria sp. TM1040] gi|99035700|gb|ABF62558.1| thymidylate kinase [Ruegeria sp. TM1040] Length = 214 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 6/214 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGLF++FEGI+G+GK++ LL L+ +V +TREPGG+ AE R ++L D + Sbjct: 7 SGLFLTFEGIDGSGKSSQCRLLAEHLRGLGREVVLTREPGGSEGAEEIRRLVLEGDPDRW 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L Sbjct: 67 SAETEILLFTAARRDHLERTILPALSAGKVVICDRFADSTRMYQGLSRGDLRATVDELHA 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI++D+ + GL R + R E FE + + EK R FL +A Sbjct: 127 LMIGR-EPDVTILIDMDPETGLARAKGRQGTEE-----RFEDFGLALQEKMRAGFLALAD 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 DR IVD A +VA ++ IV +++RV Sbjct: 181 EFADRFRIVDGARDMDAVAADVARIVEAELEQRV 214 >gi|253699689|ref|YP_003020878.1| thymidylate kinase [Geobacter sp. M21] gi|259494271|sp|C6E2H4|KTHY_GEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|251774539|gb|ACT17120.1| thymidylate kinase [Geobacter sp. M21] Length = 225 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 82/217 (37%), Positives = 118/217 (54%), Gaps = 4/217 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIEG GKTT + LLK L V VTREPGG P A+ R +LL Sbjct: 2 GFFITFEGIEGCGKTTQLRLLKERLVALGEKVTVTREPGGCPVADQMRAILLDAKNSAIT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV+ VI PAL G+ +LCDRF D++ AYQG ++ L + Sbjct: 62 PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRGLDLSVIEELNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V P T+++D PV++GL R R A + FER+ ++ H+K R +L +A Sbjct: 122 ATGRVQPALTVLIDCPVEVGLSRALARIEATSGAKEERFERESLLFHQKVRDGYLALAAA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 P+R +VD + +V E +++R+ L Sbjct: 182 FPERFVVVDGSGDV----QQTGLLVEEALRRRMQSLG 214 >gi|288941602|ref|YP_003443842.1| thymidylate kinase [Allochromatium vinosum DSM 180] gi|288896974|gb|ADC62810.1| thymidylate kinase [Allochromatium vinosum DSM 180] Length = 215 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 115/209 (55%), Gaps = 5/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EGIEGAGK+T I+ L L+ + +V TREPGG+ AE R +LL Sbjct: 5 GRFITLEGIEGAGKSTQIAPLAELLRARGLNVLTTREPGGSALAERLRALLLDPDNQGMS 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR DH++ IRPAL G +LCDRF D++YAYQG + L+++ Sbjct: 65 ETTELLLMFAARADHLDRCIRPALAAGGWVLCDRFTDATYAYQGGGRGIDPARIALLEDL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T++ DLP ++GL R ++R + D FE + E R ++L+ AR Sbjct: 125 VQGDLRPDLTLVFDLPPELGLGRAKSR-----AGQTDRFESETRRFFETARAVYLERARA 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R ++D+ S ++V + + V Sbjct: 180 NPERYRVIDATASLEAVTRAVAAELNAFV 208 >gi|302336221|ref|YP_003801428.1| thymidylate kinase [Olsenella uli DSM 7084] gi|301320061|gb|ADK68548.1| thymidylate kinase [Olsenella uli DSM 7084] Length = 231 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 7/212 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G ++ EGI+G GK+T +LL L+ ++V REPGGT +E R +LL DE Sbjct: 27 RRGRLVTLEGIDGCGKSTQAALLADHLEASGHEVVCLREPGGTAVSEKIRQLLLDPVNDE 86 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +++ A+R V VI PAL G +++CDR+ DS+YAYQ ++ Sbjct: 87 MADECELLLYEASRAQLVRQVIEPALERGAVVVCDRYFDSTYAYQHGGRGLDRTLVERCN 146 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E+ PD T++ DL + R D E + E+ R +LD+A Sbjct: 147 ELGSCGRRPDVTLVFDLDPTVAFARATQ-------GGRDRLEGAGLRFQERVRASYLDLA 199 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R ++D+ S V L ++ ++++ Sbjct: 200 AKEPARVRVIDATGSADEVGRRALLVLADVLR 231 >gi|315499862|ref|YP_004088665.1| thymidylate kinase [Asticcacaulis excentricus CB 48] gi|315417874|gb|ADU14514.1| thymidylate kinase [Asticcacaulis excentricus CB 48] Length = 212 Score = 249 bits (636), Expect = 3e-64, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 5/206 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG EGAGK+T + L L+ +V TREPGG+ AEA R +L++ + Sbjct: 2 TGRFITFEGGEGAGKSTQVKALVAHLRELALEVVQTREPGGSSGAEALRDLLVTGEAGRW 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ AAR +H+E VIRPAL G ++CDRF DS+ AYQG ++S+ Sbjct: 62 SPMSETLMMYAARANHLEQVIRPALERGAWIVCDRFSDSTRAYQGAGGGVTPELIESIDA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + PD I++D+P + GLKR R + FE K + HE+ R+ F A Sbjct: 122 AVVADTQPDLVIVMDMPPEAGLKRALARGDAE-----NRFESKGLAFHERLREGFRRRAA 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++D+ S + + ++ +V Sbjct: 177 AHPERYRLIDADRSIEDIKADVWRVV 202 >gi|23097491|ref|NP_690957.1| thymidylate kinase [Oceanobacillus iheyensis HTE831] gi|46576586|sp|Q8EU53|KTHY_OCEIH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|22775714|dbj|BAC11992.1| thymidylate kinase [Oceanobacillus iheyensis HTE831] Length = 225 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 4/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+FEG EGAGKTT I + + L + DV TREPGG +E R ++ E Sbjct: 2 AGLFITFEGGEGAGKTTVIQHIFQKLIAQGIDVIQTREPGGIKISEKIRSIIHDPEHLEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AAAR H+ + PAL +GK++LCDRF+DSS AYQG + ++ Sbjct: 62 EERTEALLYAAARRQHLVEKVFPALEQGKVVLCDRFVDSSLAYQGYARGLGIDEVYAINH 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +Q+ MPD T+ D+ GL+R+ + + + +++ HE + + + Sbjct: 122 FVIQDCMPDLTLFFDIEPKKGLERIAANKNRER----NRLDLENMQFHEAVYEGYQKVIA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R + + + ++V + + I+ + ++ Sbjct: 178 RFPERIKTIQAEQALEAVEQDTMEIISSFLNEK 210 >gi|325203757|gb|ADY99210.1| thymidylate kinase [Neisseria meningitidis M01-240355] Length = 206 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP E R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRGVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS + V +I ++ Sbjct: 178 ERYAVIDSNRNLDEVRNSIEKVL 200 >gi|254512028|ref|ZP_05124095.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11] gi|221535739|gb|EEE38727.1| thymidylate kinase [Rhodobacteraceae bacterium KLH11] Length = 203 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 119/209 (56%), Gaps = 6/209 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEGI+G+GK+T LL L+R+ ++V +TREPGG+ AE R+++L D + A Sbjct: 1 MFLTFEGIDGSGKSTQARLLAEHLRREGHEVILTREPGGSDGAEEIRNLVLQGDPDRWSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L + Sbjct: 61 ETEILLFTAARRDHLERTIEPALAAGKVVICDRFADSTRMYQGLSRGDLRGLVDQLHNLM 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T+++D+ GL R + R E FE + + ++ R FL +A+ Sbjct: 121 I-GREPDLTLLIDMDPGTGLSRAKGRQGAEE-----RFEDFGLDLQQQMRAGFLALAQEF 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 DR +VD + SVA ++ +V ++ Sbjct: 175 SDRFRVVDGNRNMDSVAQDVTKVVMMALR 203 >gi|229816418|ref|ZP_04446719.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM 13280] gi|229807960|gb|EEP43761.1| hypothetical protein COLINT_03471 [Collinsella intestinalis DSM 13280] Length = 226 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 106/210 (50%), Gaps = 6/210 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+ EGI+G GK+T L+ L+ +DV REPGG +E R +LL E Sbjct: 3 SRGLFITVEGIDGCGKSTQARLIAAALEAAGHDVLRLREPGGVKISEQIREILLDPANVE 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G E +++ AAR V VIRPAL GK ++CDRF DS+ AYQ D + Sbjct: 63 MGDVCELLLYEAARAQLVHQVIRPALAAGKTVVCDRFYDSTTAYQAFADGLDRNMVSQAN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E++V PD T++ DLPV+ L+R R D E K + E+ F +A Sbjct: 123 ELAVDGCRPDLTLVFDLPVEDALRRRSGR------EAEDRLELKGLEFQERVAAGFRAVA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++PDR ++D+ S V + + + Sbjct: 177 VDEPDRVKLIDAGGSIAEVFSGVAAELRSA 206 >gi|295395540|ref|ZP_06805734.1| integral membrane protein with kinase activity [Brevibacterium mcbrellneri ATCC 49030] gi|294971559|gb|EFG47440.1| integral membrane protein with kinase activity [Brevibacterium mcbrellneri ATCC 49030] Length = 824 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 118/212 (55%), Gaps = 9/212 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVD 60 ++GLFI+ EG +GAGKTT I L L+ + +D V TREPGGTP ++ R VLL + Sbjct: 472 STGLFIAIEGGDGAGKTTQIRKLVEHLESRGFDPVIATREPGGTPVGKSIRSVLLDG--E 529 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++EA+++AA R HV ++ P+L + ++ DR++DSS AYQ + +L Sbjct: 530 AVSKKSEALLYAADRAHHVATLVAPSLEQDGAVVTDRYIDSSLAYQAGGRELSEDDVLAL 589 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++P+ T++LD+ + +R+ NR ++ +++ + ++ R FL + Sbjct: 590 SRWATSGLVPNLTLVLDIDPRVAAERMGNREDA------NHLDKQSLEFKDRVRAGFLRL 643 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +PDR ++ + S VA +I +V ++ Sbjct: 644 AEAEPDRYAVIPAGRSVNEVAEHIQRVVDAII 675 >gi|314937311|ref|ZP_07844653.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80] gi|313654607|gb|EFS18357.1| dTMP kinase [Staphylococcus hominis subsp. hominis C80] Length = 205 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 118/208 (56%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT ++ + + L +NY+V TREPGG E R++LL + Sbjct: 4 FITFEGPEGSGKTTVLNQINKLL-SENYNVISTREPGGVSTGEEIRNILLDG--ENIDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL K++LCDR++DSS AYQG + + E ++ Sbjct: 61 TEALLFAASRREHLVEKVIPALKNDKVVLCDRYIDSSLAYQGYARGIGIEEVKKINEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++ + H+K + + + + P Sbjct: 121 NGLYPDLTIYLDIDAEVGRERI-----LKNQRSQNRLDKETLTFHQKVIEGYKTLIKTNP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +VD+ S +SV ++ I+ ++ Sbjct: 176 ERFKVVDATQSIESVISDTYEIILSYLK 203 >gi|159897030|ref|YP_001543277.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779] gi|229621739|sp|A9AV71|KTHY_HERA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|159890069|gb|ABX03149.1| dTMP kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 236 Score = 248 bits (635), Expect = 3e-64, Method: Composition-based stats. Identities = 77/227 (33%), Positives = 116/227 (51%), Gaps = 19/227 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG+GK+T LK +LQ+ Y V +TREPGGTP ++A R ++L Sbjct: 3 LFITFEGPEGSGKSTQARYLKDYLQQAGYPVILTREPGGTPISDAVRRLVLDGQWTAMEP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++FAAAR V VI P L G I+LCDR+ DS++A+QG L + + Sbjct: 63 TTETLLFAAARAQLVGEVILPYLKLGGIVLCDRYADSTFAHQGYGLGRNLTELREITRFA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACL------------------DYFERK 165 + PD T LDLPV+ GL+R + R RES+ L + + + Sbjct: 123 TGGLQPDLTFFLDLPVEQGLQRKRKQRDDFRESSQLALPLPHLPQPSPSQNEHWNRLDAR 182 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ HE+ R +L++ P R + D+ +S+ +L V + Sbjct: 183 EIAYHERVRSGYLEMIAADPQRWQVFDAGIERESLTEQLLLAVQPHL 229 >gi|188996346|ref|YP_001930597.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|229621845|sp|B2V7X0|KTHY_SULSY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|188931413|gb|ACD66043.1| dTMP kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 204 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 8/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIE +GKTT I+LL +L+ +V TREPGGT + R +LLS ++F Sbjct: 2 GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ + R H++++++P+L G I+L DR++DS+ AYQ + + L + Sbjct: 62 YIAELLLYESDRNIHIQSIVKPSLDAGYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P+ T ++D+PV+I LKR+ S D E +D+ H+K R+ FL IA N Sbjct: 122 ATDGLKPNLTFLIDIPVEISLKRL--------SESKDRIESEDIEFHKKLREGFLKIAEN 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 + R ++D + I++ + + Sbjct: 174 EKGRFVVIDGTMDIMEIHKIIVDSLKQ 200 >gi|1246361|gb|AAA93511.1| thymidine:thymidylate kinase:zeocin resistance fusion protein [Cloning vector pZEO-SG3] Length = 560 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 11/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 215 MARSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 274 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 275 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 334 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 335 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 388 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 389 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 425 >gi|1246364|gb|AAA93513.1| thymidylate:zeocin resistance protein:NDP kinase fusion protein [Cloning vector pZEO-SG4] Length = 494 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 111/218 (50%), Gaps = 11/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MARSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 61 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 121 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 175 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 211 >gi|260426355|ref|ZP_05780334.1| thymidylate kinase [Citreicella sp. SE45] gi|260420847|gb|EEX14098.1| thymidylate kinase [Citreicella sp. SE45] Length = 208 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 81/207 (39%), Positives = 118/207 (57%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFISFEGI+G+GK+T LL L+ ++V +TREPGG+P AE R ++L D + Sbjct: 5 TGLFISFEGIDGSGKSTQARLLAEQLRGDGHEVVLTREPGGSPGAEEIRALVLQGDPDRW 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I+PAL G ++CDRF DS+ YQG +D+L E Sbjct: 65 SAETELLLFTAARRDHLERTIQPALARGATVICDRFADSTRMYQGLSRGDLRAAVDALHE 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V PD TI++D+ L R + R + E FE + + EK R FL +A Sbjct: 125 RMI-GVEPDLTILIDMDPAAALPRAKARATAEE-----RFEDFGLPLQEKMRAGFLALAA 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 PDR I+D + ++VA ++ + Sbjct: 179 EFPDRFRIIDGNRAPEAVARDVRAALQ 205 >gi|86136161|ref|ZP_01054740.1| thymidylate kinase [Roseobacter sp. MED193] gi|85827035|gb|EAQ47231.1| thymidylate kinase [Roseobacter sp. MED193] Length = 218 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 115/215 (53%), Gaps = 6/215 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++FEGI+G+GK+T L L+ YDV +TREPGG+ AE R ++L D++ Sbjct: 6 TGLFLTFEGIDGSGKSTQCKRLAETLRLAGYDVVLTREPGGSEGAEEIRRMVLEGDPDKW 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L Sbjct: 66 SAETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRTTVDQLHT 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+++D+ GL R + R E FE + + EK R FL +A Sbjct: 126 LMIGR-EPDLTLLIDMDPATGLSRAKGRQGTEE-----RFEDFGLGLQEKMRAGFLSLAE 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +VD A +VA ++L + R Sbjct: 180 EFSTRFRVVDGAQDIDTVAADVLRHTKLALASRTG 214 >gi|261364212|ref|ZP_05977095.1| dTMP kinase [Neisseria mucosa ATCC 25996] gi|288567825|gb|EFC89385.1| dTMP kinase [Neisseria mucosa ATCC 25996] Length = 208 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 116/206 (56%), Gaps = 7/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ +GI+GAGK+T++++++++ + + V TREPGGTP EA R +LL+ Sbjct: 2 KPKFITLDGIDGAGKSTNLAVIRQWFESHHLPVLFTREPGGTPVGEALREILLNPETKA- 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AE ++ AAR H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 61 GLRAETLMMFAARQQHLEDVILPALADGVHVVSDRFTDATFAYQGGGRGVPLQDIEMLEN 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD T++LD+P+++ + R+ + D FE++ + R ++L+ A Sbjct: 121 WVQGGFGPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFTRVRAVYLERAA 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P+R ++DS S + V +I + Sbjct: 175 AHPERYALIDSNRSLEEVRADIEYAL 200 >gi|32034665|ref|ZP_00134803.1| COG0125: Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209279|ref|YP_001054504.1| thymidylate kinase [Actinobacillus pleuropneumoniae L20] gi|165977254|ref|YP_001652847.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|190151172|ref|YP_001969697.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252694|ref|ZP_07338856.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307246746|ref|ZP_07528815.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307248888|ref|ZP_07530899.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307255731|ref|ZP_07537534.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257916|ref|ZP_07539670.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307260183|ref|ZP_07541892.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262310|ref|ZP_07543958.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307264521|ref|ZP_07546105.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|229487547|sp|A3N3B3|KTHY_ACTP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687523|sp|B0BSY9|KTHY_ACTPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238692362|sp|B3GZ69|KTHY_ACTP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|126098071|gb|ABN74899.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|165877355|gb|ABY70403.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|189916303|gb|ACE62555.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648433|gb|EFL78627.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306852352|gb|EFM84588.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306854583|gb|EFM86775.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306861291|gb|EFM93282.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306863563|gb|EFM95492.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306865728|gb|EFM97607.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306867973|gb|EFM99801.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306870120|gb|EFN01880.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 208 Score = 248 bits (635), Expect = 4e-64, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGKTT ++ L++ +V TREPGGTP AE RH++ + Sbjct: 2 RGKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQTREPGGTPLAEKLRHLIKHETEEAV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQG L++L+E Sbjct: 62 SDKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHLLETLKE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD TI LD+ +GL R + R LD E++ + + RQ +L++ + Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGR------GELDRIEQQSLDFFYRTRQRYLELTQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 N ++ I+++ S + VA +I V ++ Sbjct: 176 NN-EKAVIINAEQSIEQVAADIQQAVENFLK 205 >gi|87199958|ref|YP_497215.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444] gi|87135639|gb|ABD26381.1| thymidylate kinase [Novosphingobium aromaticivorans DSM 12444] Length = 209 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G F++FEG EG GK+T LL L+ + +V TREPGGT AEA R +LLS + Sbjct: 1 MSRGRFVAFEGGEGVGKSTQGRLLAESLRARGLEVVTTREPGGTAGAEAIRTMLLSTEGE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +GA AEA++FAAAR DHVE +IRP++ G ++CDRF+DSS AYQG + L Sbjct: 61 GWGARAEALLFAAARADHVEKLIRPSVARGAWVVCDRFVDSSRAYQGGGSGLSDADVMQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I ++PD TI+L + +I R+ R + D + H + F Sbjct: 121 HRIGSAGLLPDVTILLTVRPEISAARLAMR----DGNAADRIGGRGEEYHGRVAAAFRRF 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +PDR +VD+ S + V + + + + Sbjct: 177 AEQEPDRFAVVDAEGSPEEVHARVTAAIDKAL 208 >gi|330817241|ref|YP_004360946.1| Thymidylate kinase [Burkholderia gladioli BSR3] gi|327369634|gb|AEA60990.1| Thymidylate kinase [Burkholderia gladioli BSR3] Length = 206 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ L+ + V TREPGGT E+ R VLL Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFCEQLRAQVAASGRQVVQTREPGGTTLGESLRAVLL- 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A+R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 60 --EQAMDLETEALLMFASRREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD TI+ D+P ++ +R + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTILFDVPPEVASERRGA------ARAPDKFEAESDAFFLRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD++ S + + ++ L Sbjct: 172 YLRRAEEAPYRFLIVDASQSIAQIQRQLEGVLASL 206 >gi|323526017|ref|YP_004228170.1| thymidylate kinase [Burkholderia sp. CCGE1001] gi|323383019|gb|ADX55110.1| thymidylate kinase [Burkholderia sp. CCGE1001] Length = 206 Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R + D FE + E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R I+DS+ S + + ++ L Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIARIQKQLEELIVNL 206 >gi|150015005|ref|YP_001307259.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052] gi|189028831|sp|A6LPM3|KTHY_CLOB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|149901470|gb|ABR32303.1| dTMP kinase [Clostridium beijerinckii NCIMB 8052] Length = 213 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI FEG EG GKTT I + ++ N++ TREPGG +E R V+LS Sbjct: 1 MKKGLFIVFEGGEGTGKTTAIDAIYDWITENNFECIKTREPGGIKISEQIRQVILSKDNK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A+ EA+++AAAR H+ + PAL +G I+LCDRF+DSS AYQG + + S+ Sbjct: 61 EMDAKTEALLYAAARRQHLVEKVIPALNQGVIVLCDRFIDSSLAYQGYARNLGIEEVLSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ E MPD +++ DL IGL R+ N + ++ + + + HE+ R+ + + Sbjct: 121 NKFAIGEYMPDISVLFDLDPKIGLARIANN----DCREVNRLDIEKLEFHERVREGYDIV 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +N R +D+ ++ ++V I NI+ + Sbjct: 177 YKNNNHRIVKIDANNTKENVINQIKNILRPKI 208 >gi|325978913|ref|YP_004288629.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325178841|emb|CBZ48885.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 210 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ +IGL R+ ++ + + + +H++ R+ +L + Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVREGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A + R +D++ V + L I+ E + K+ Sbjct: 177 AEQEK-RIVTIDASRELADVVSETLQIILEQLAKK 210 >gi|116493219|ref|YP_804954.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745] gi|122265317|sp|Q03E60|KTHY_PEDPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116103369|gb|ABJ68512.1| thymidylate kinase [Pediococcus pentosaceus ATCC 25745] Length = 209 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 122/214 (57%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN G FISFEG +GAGKTT + + Q++ D + VTREPGG P +EA R ++L Sbjct: 1 MN-GHFISFEGPDGAGKTTVLQAMVEHYQQRLKDQLTVTREPGGNPISEAIRTIILDKNN 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA+++AAAR H+ I PAL + ++ CDRF+DSS AYQG + Sbjct: 60 TEMDERTEALLYAAARRQHLVETILPALKKNHVVFCDRFVDSSIAYQGAGRKIGTDAVYQ 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + +P+ TI LD+P ++GLKR+ + +D + + + H++ R +LD Sbjct: 120 MNLFATEGALPEKTIYLDVPSELGLKRIM----THRTEDVDRLDLEQLDFHQRVRSAYLD 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ PDR ++D++ V +++ ++ +++ Sbjct: 176 LAKKFPDRIVVIDASQELDDVKRDVIEVLDQILN 209 >gi|323359121|ref|YP_004225517.1| thymidylate kinase [Microbacterium testaceum StLB037] gi|323275492|dbj|BAJ75637.1| thymidylate kinase [Microbacterium testaceum StLB037] Length = 224 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEG +GAGKTT +LL+ +L+ +V TREPGGT R ++L D Sbjct: 21 GLFVTFEGGDGAGKTTQAALLEAWLRENGREVVRTREPGGTEVGVLVRDIVLHHRGD-IA 79 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R H+E V+RPA+ G +++ DR+LDSS AYQG + L Sbjct: 80 PRAEALLYAADRAHHIETVVRPAISRGDVVIQDRYLDSSVAYQGAGRVLDADDIRDLSLW 139 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD T++LDL R+ + D E + H + R FL +A Sbjct: 140 ATGGLLPDLTVLLDLDPAAARSRLDA-----DEKPFDRLEAEKGEFHTRVRDGFLALAAA 194 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R ++D+ +A + V + Sbjct: 195 EPERFIVLDARQPVPELADRVREAVASRL 223 >gi|319408563|emb|CBI82216.1| Thymidylate kinase [Bartonella schoenbuchensis R1] Length = 214 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 102/210 (48%), Positives = 142/210 (67%), Gaps = 2/210 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+FEG EGAGKTT ISLL ++L+ KNYDV +TREPGGT AEA R+VLLS +++ Sbjct: 2 SGYFITFEGGEGAGKTTQISLLAQYLRSKNYDVVITREPGGTAGAEAMRYVLLSGNTEQY 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA EA++F AAR+DHV VI P+L GKI+LCDRF+DS YQG + L L Sbjct: 62 GAFIEAVLFTAARVDHVSEVILPSLQAGKIILCDRFIDSMRVYQGLNNKVNSHLLSVLGR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I + VMP+ T +LD+P G++R R +E +DYFE+ + I E+RRQ FL +AR Sbjct: 122 IGLGTVMPNLTFLLDIPATFGMERTDLR--RKEIGKIDYFEKDQLNIQEQRRQAFLQLAR 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 N+P R ++D+ + +++A+ I +I +L+ Sbjct: 180 NEPFRFRVIDATCAVETIASQIKDICHQLI 209 >gi|295676547|ref|YP_003605071.1| thymidylate kinase [Burkholderia sp. CCGE1002] gi|295436390|gb|ADG15560.1| thymidylate kinase [Burkholderia sp. CCGE1002] Length = 206 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ + L+ K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLGWFRERLEAKLAPSGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ +VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---QMDLETEALLMFALRRQHLADVIEPALTRGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DLP + +R + D FE + E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLPPAVANERRSA------ARNPDRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ A P R I+DS+ S + + ++ L Sbjct: 172 YMRRAEEAPYRFAIIDSSQSVARIQKQLEELIATL 206 >gi|126668139|ref|ZP_01739101.1| thymidylate kinase [Marinobacter sp. ELB17] gi|126627409|gb|EAZ98044.1| thymidylate kinase [Marinobacter sp. ELB17] Length = 209 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG EG GK+T ++ L+ +V VTREPGGTP AEA R +LL+ + Sbjct: 3 QRGRFITFEGTEGMGKSTQLATAAASLRAVGINVLVTREPGGTPMAEAIRELLLAPRDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++ AAR H+ I PAL G+ +LCDRF D+++AYQG + + L+ Sbjct: 63 VHELTELLLMFAARAQHLHTRILPALTAGQWVLCDRFTDATFAYQGGGRGTPAERIGLLE 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + E+ PD ++LD PV+ G+ R + R LD FE++ V + R +L A Sbjct: 123 TLVQGELRPDHIVLLDAPVETGMARARKR------GELDRFEQETVEFFARIRATYLQRA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R+ P R HIVD+ V+ ++ + E+V Sbjct: 177 RHDPQRYHIVDAGQPLARVSADVKRLFQEIV 207 >gi|21909825|ref|NP_664093.1| thymidylate kinase [Streptococcus pyogenes MGAS315] gi|161486344|ref|NP_802832.2| thymidylate kinase [Streptococcus pyogenes SSI-1] gi|25453083|sp|Q8K8H4|KTHY_STRP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21904011|gb|AAM78896.1| putative thymidylate kinase [Streptococcus pyogenes MGAS315] Length = 211 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLTLL 209 >gi|237808932|ref|YP_002893372.1| thymidylate kinase [Tolumonas auensis DSM 9187] gi|237501193|gb|ACQ93786.1| thymidylate kinase [Tolumonas auensis DSM 9187] Length = 209 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FI EG+EGAGK+T +S + +L++ + TREPGGTP AE R ++ + Sbjct: 2 SGKFIVIEGLEGAGKSTAVSYVLDWLRQHGITRIETTREPGGTPLAEKMRSIVKEVHDEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VEN I+PAL G ++ DR SS AYQG + + ++ Sbjct: 62 LTVQAELLLMYAARVQLVENRIKPALQSGYWVVGDRHDLSSQAYQGGGRGIDPVLISQIK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ IGL R + R LD E++ + ++ R +L++A Sbjct: 122 QAVLGDFAPDLTLYLDIDPAIGLHRARQR------GELDRIEQEALAFFQRTRARYLELA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R P R I+D++ + + V I + + + Sbjct: 176 RQDP-RISIIDASQTPEQVQAAINAALEQAL 205 >gi|162139412|ref|YP_279788.2| thymidylate kinase [Streptococcus pyogenes MGAS6180] Length = 211 Score = 248 bits (634), Expect = 5e-64, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|121634466|ref|YP_974711.1| thymidylate kinase [Neisseria meningitidis FAM18] gi|166221758|sp|A1KST1|KTHY_NEIMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120866172|emb|CAM09912.1| putative thymidylate kinase [Neisseria meningitidis FAM18] gi|325131877|gb|EGC54577.1| thymidylate kinase [Neisseria meningitidis M6190] Length = 206 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 67/203 (33%), Positives = 117/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200 >gi|328758423|gb|EGF72039.1| thymidylate kinase [Propionibacterium acnes HL020PA1] Length = 214 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|50841735|ref|YP_054962.1| putative thymidylate kinase [Propionibacterium acnes KPA171202] gi|50839337|gb|AAT82004.1| putative thymidylate kinase [Propionibacterium acnes KPA171202] Length = 228 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 26 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 85 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 86 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 145 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 146 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 196 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 197 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 228 >gi|15674539|ref|NP_268713.1| thymidylate kinase [Streptococcus pyogenes M1 GAS] gi|71910144|ref|YP_281694.1| thymidylate kinase [Streptococcus pyogenes MGAS5005] gi|23821808|sp|Q9A190|KTHY_STRP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|13621644|gb|AAK33434.1| putative thymidylate kinase [Streptococcus pyogenes M1 GAS] gi|71852926|gb|AAZ50949.1| thymidylate kinase [Streptococcus pyogenes MGAS5005] Length = 211 Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K D+ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQDILTTREPGGVAISEHIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|225849733|ref|YP_002729967.1| thymidylate kinase [Persephonella marina EX-H1] gi|225646361|gb|ACO04547.1| thymidylate kinase [Persephonella marina EX-H1] Length = 216 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 72/208 (34%), Positives = 116/208 (55%), Gaps = 6/208 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGIEGAGK+T +L +L + + +TREPGGT + R +LL+ + F Sbjct: 11 RGFFITFEGIEGAGKSTQSKMLYEYLIKNGKNAVLTREPGGTDLGKKIREILLNPSKEIF 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++ A R HV N+I+P L G ++ DRF DS+ AYQG ++ L + Sbjct: 71 PPVAELMLYEADRNIHVHNIIKPYLNRGFYVISDRFTDSTLAYQGYARGIDIELVERLND 130 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + + PD T I+D+PV+ G+KR+ D E++ V H++ R+ FL IA+ Sbjct: 131 IASEGIKPDITFIIDIPVEEGMKRIH------RYREKDRIEQEGVDFHKRLREGFLRIAQ 184 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +R ++D + + IL I+ + Sbjct: 185 KERERVVLLDGRKDKEIIFNEILEILRK 212 >gi|161761322|ref|YP_059674.2| thymidylate kinase [Streptococcus pyogenes MGAS10394] gi|59798144|sp|Q5XDM2|KTHY_STRP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 211 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPLLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TAMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|91783552|ref|YP_558758.1| thymidylate kinase [Burkholderia xenovorans LB400] gi|123062899|sp|Q13YY3|KTHY_BURXL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91687506|gb|ABE30706.1| thymidylate kinase [Burkholderia xenovorans LB400] Length = 206 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 106/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+S + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL ++ +R + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEVASERRSA------ARDPDRFESESEAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DSA S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIAQIQRRLEELI 203 >gi|255065851|ref|ZP_05317706.1| dTMP kinase [Neisseria sicca ATCC 29256] gi|255049762|gb|EET45226.1| dTMP kinase [Neisseria sicca ATCC 29256] Length = 208 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 116/208 (55%), Gaps = 7/208 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ +GI+GAGK+T++++++R+ + + V TREPGGTP EA R +LL+ Sbjct: 2 KPKFITLDGIDGAGKSTNLAVIRRWFESHDLPVLFTREPGGTPVGEALREILLNPETKA- 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AE ++ AAR H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 61 GLRAETLMMFAARQQHLEDVILPALADGIHVVSDRFTDATFAYQGGGRGVPLQDIEMLEN 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD T++LD+P+++ + R+ + D FE++ + R ++L+ A Sbjct: 121 WVQGGFGPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFTRVRAVYLERAA 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R ++D S + V +I + + Sbjct: 175 AHPERYALIDGNRSLEEVRADIEHALAR 202 >gi|229083343|ref|ZP_04215702.1| Thymidylate kinase [Bacillus cereus Rock3-44] gi|228699968|gb|EEL52594.1| Thymidylate kinase [Bacillus cereus Rock3-44] Length = 208 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 60/210 (28%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GK+T I+ L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIREILHKQEHTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALERNYLVLCDRFIDSSLAYQGYARGLGVDKVYEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP+ TI LD+ ++GL R++ + ++ + + + H++ R+ +L + Sbjct: 122 FATEDCMPNLTIYLDIEPEVGLARIEK----DANREVNRLDMESIKFHKRVREGYLQLVD 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +R +V++ + + ++ ++ + + Sbjct: 178 RFANRIVVVNADQPMEEIMEEVIQLIEDKL 207 >gi|261338416|ref|ZP_05966300.1| dTMP kinase [Bifidobacterium gallicum DSM 20093] gi|270276387|gb|EFA22241.1| dTMP kinase [Bifidobacterium gallicum DSM 20093] Length = 200 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 10/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 +FI+FEGI+GAGKTT + LL + LQ V VTREPGGT + R +LL D Sbjct: 1 MFITFEGIDGAGKTTQVKLLAQALQEAGRSVEVTREPGGTALGASLRRLLLEGVADGSAI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA++FAA R HV VIRPA+ G ++CDR++DSS AYQG + +L Sbjct: 61 DEHAEALMFAADRAQHVAQVIRPAMQRGDDVICDRYIDSSVAYQGGGRDIGADQIRALSM 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD TI+LDL + R+ + D E + R+ FL +A Sbjct: 121 WATGGLVPDLTIVLDLDPALSAARL--------NRPADRMESAGDEFARRTREAFLAMAA 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 +P+R ++D++ + +A ++ V Sbjct: 173 AEPERFRVIDASLPVERIAADVRAAV 198 >gi|260575561|ref|ZP_05843559.1| thymidylate kinase [Rhodobacter sp. SW2] gi|259022204|gb|EEW25502.1| thymidylate kinase [Rhodobacter sp. SW2] Length = 209 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 6/205 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FISFEGI+G+GK+T LL L++ + V TREPGG+P AE R ++L D Sbjct: 1 MALGRFISFEGIDGSGKSTQSRLLAESLRKLGHSVCQTREPGGSPGAEEIRRLVLEGDPD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E IRPAL G++++ DRF DS+ YQG ++ L Sbjct: 61 RWSAETEILLFTAARRDHLEKTIRPALARGEVVITDRFADSTRMYQGISRGDLGPLVNRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + V PD T+++DL +GL R R + FE + + K R FL + Sbjct: 121 HDLMI-GVEPDLTLLIDLDPALGLNRAVARAGAEQ-----RFEDMGLALQIKMRAGFLAL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL 205 A P+R ++D ++VA ++L Sbjct: 175 AAAHPERFRVIDGNRPPEAVAADVL 199 >gi|269796533|ref|YP_003315988.1| thymidylate kinase [Sanguibacter keddieii DSM 10542] gi|269098718|gb|ACZ23154.1| thymidylate kinase [Sanguibacter keddieii DSM 10542] Length = 215 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 110/212 (51%), Gaps = 11/212 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 SG FISFEG +GAGK+T LL +L++ V TREPGGT R +L D Sbjct: 6 QSGYFISFEGGDGAGKSTQSRLLGEWLEQVTGRRVVWTREPGGTELGLVLRQAVLHG--D 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++A R HV +++RPAL G +++ DR+LDSS AYQ + ++ L Sbjct: 64 HVDPRTEALLYATDRAHHVASLVRPALERGDVVITDRYLDSSIAYQAGGRTLPVEEIEQL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + ++P T++LD+ +G +R+ A D ER H + RQ +L+ Sbjct: 124 STWATEGLLPHATVLLDIDPLVGTRRL--------DAAPDRLERAGDEFHRRTRQAYLER 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P R +VD++ + ++ I + V E + Sbjct: 176 AAQDPARWVVVDASGTVDAIHREIRSAVAERL 207 >gi|59798224|sp|Q6AB62|KTHY_PROAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 204 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 2 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 62 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 122 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 173 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 204 >gi|325137927|gb|EGC60502.1| thymidylate kinase [Neisseria meningitidis ES14902] Length = 206 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 116/203 (57%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP E R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGETLREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVL 200 >gi|332141143|ref|YP_004426881.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype'] gi|238693284|sp|B4S1N2|KTHY_ALTMD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|327551165|gb|AEA97883.1| thymidylate kinase [Alteromonas macleodii str. 'Deep ecotype'] Length = 222 Score = 248 bits (633), Expect = 6e-64, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 108/214 (50%), Gaps = 7/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ I L+ + L V TREPGGTP AEA R + + Sbjct: 2 RGKFIVVEGLEGAGKSSVIGLIVKALTDAGMRVEQTREPGGTPMAEAIRECVKHDWDETV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR+ + N I P+L G ++ DR SS AYQG + ++ + Sbjct: 62 SEETELLLMYAARVQLLTNKIYPSLNAGAWVVGDRHDLSSQAYQGGGRGVSEKTMTAISD 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ PD T+ LD+ +GL+R + R LD E+ + E+ R +L +A Sbjct: 122 IALNGFKPDLTLYLDVDPAVGLERARGR------GELDRIEQAGLGFFERTRARYLSLAE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 N + +V++ + V ++++I+ V + + Sbjct: 176 ND-ESIIVVNAMQPMEQVHQDVISIIANYVSQHI 208 >gi|183602882|ref|ZP_02964242.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019] gi|219682707|ref|YP_002469090.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011] gi|241190283|ref|YP_002967677.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04] gi|241195689|ref|YP_002969244.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183217883|gb|EDT88534.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis HN019] gi|219620357|gb|ACL28514.1| thymidylate kinase [Bifidobacterium animalis subsp. lactis AD011] gi|240248675|gb|ACS45615.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250243|gb|ACS47182.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289178000|gb|ADC85246.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis BB-12] gi|295793270|gb|ADG32805.1| Thymidylate kinase [Bifidobacterium animalis subsp. lactis V9] Length = 206 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 9/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-V 59 M +GLFISFEG++GAGKTT ++LL +L+ +V VTREPGGT R +LL+ Sbjct: 1 MGAGLFISFEGVDGAGKTTQVNLLADYLRALGREVVVTREPGGTALGTQIRAMLLTTNPD 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E EA++FAA R HV VIRPAL G +++ DR+LDSS AYQ + + Sbjct: 61 EEISPRTEALLFAADRAQHVSEVIRPALERGAVVITDRYLDSSLAYQSGGRELTADDIRT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++P T +LD+ R+++ D E ++ R FL+ Sbjct: 121 LSMWATNNLLPARTYLLDIDPRASHTRLEH--------AEDRMESAGDDFQQRTRTAFLE 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A QP R ++D+ S +A I + V L++ Sbjct: 173 LAAVQPQRFCVIDAQQSVGEIAALICDDVANLLE 206 >gi|289424286|ref|ZP_06426069.1| dTMP kinase [Propionibacterium acnes SK187] gi|289428912|ref|ZP_06430592.1| dTMP kinase [Propionibacterium acnes J165] gi|295129812|ref|YP_003580475.1| dTMP kinase [Propionibacterium acnes SK137] gi|289154983|gb|EFD03665.1| dTMP kinase [Propionibacterium acnes SK187] gi|289157913|gb|EFD06136.1| dTMP kinase [Propionibacterium acnes J165] gi|291375883|gb|ADD99737.1| dTMP kinase [Propionibacterium acnes SK137] gi|313765300|gb|EFS36664.1| thymidylate kinase [Propionibacterium acnes HL013PA1] gi|313772784|gb|EFS38750.1| thymidylate kinase [Propionibacterium acnes HL074PA1] gi|313793193|gb|EFS41260.1| thymidylate kinase [Propionibacterium acnes HL110PA1] gi|313802718|gb|EFS43936.1| thymidylate kinase [Propionibacterium acnes HL110PA2] gi|313806376|gb|EFS44883.1| thymidylate kinase [Propionibacterium acnes HL087PA2] gi|313810924|gb|EFS48638.1| thymidylate kinase [Propionibacterium acnes HL083PA1] gi|313814577|gb|EFS52291.1| thymidylate kinase [Propionibacterium acnes HL025PA1] gi|313815332|gb|EFS53046.1| thymidylate kinase [Propionibacterium acnes HL059PA1] gi|313817530|gb|EFS55244.1| thymidylate kinase [Propionibacterium acnes HL046PA2] gi|313822009|gb|EFS59723.1| thymidylate kinase [Propionibacterium acnes HL036PA1] gi|313824095|gb|EFS61809.1| thymidylate kinase [Propionibacterium acnes HL036PA2] gi|313826462|gb|EFS64176.1| thymidylate kinase [Propionibacterium acnes HL063PA1] gi|313828770|gb|EFS66484.1| thymidylate kinase [Propionibacterium acnes HL063PA2] gi|313831689|gb|EFS69403.1| thymidylate kinase [Propionibacterium acnes HL007PA1] gi|313834429|gb|EFS72143.1| thymidylate kinase [Propionibacterium acnes HL056PA1] gi|313840380|gb|EFS78094.1| thymidylate kinase [Propionibacterium acnes HL086PA1] gi|314916047|gb|EFS79878.1| thymidylate kinase [Propionibacterium acnes HL005PA4] gi|314917199|gb|EFS81030.1| thymidylate kinase [Propionibacterium acnes HL050PA1] gi|314926586|gb|EFS90417.1| thymidylate kinase [Propionibacterium acnes HL036PA3] gi|314931095|gb|EFS94926.1| thymidylate kinase [Propionibacterium acnes HL067PA1] gi|314955036|gb|EFS99442.1| thymidylate kinase [Propionibacterium acnes HL027PA1] gi|314959075|gb|EFT03177.1| thymidylate kinase [Propionibacterium acnes HL002PA1] gi|314961349|gb|EFT05450.1| thymidylate kinase [Propionibacterium acnes HL002PA2] gi|314964605|gb|EFT08705.1| thymidylate kinase [Propionibacterium acnes HL082PA1] gi|314969704|gb|EFT13802.1| thymidylate kinase [Propionibacterium acnes HL037PA1] gi|314974770|gb|EFT18865.1| thymidylate kinase [Propionibacterium acnes HL053PA1] gi|314977031|gb|EFT21126.1| thymidylate kinase [Propionibacterium acnes HL045PA1] gi|314980307|gb|EFT24401.1| thymidylate kinase [Propionibacterium acnes HL072PA2] gi|314985483|gb|EFT29575.1| thymidylate kinase [Propionibacterium acnes HL005PA1] gi|314987392|gb|EFT31483.1| thymidylate kinase [Propionibacterium acnes HL005PA2] gi|314989067|gb|EFT33158.1| thymidylate kinase [Propionibacterium acnes HL005PA3] gi|315078377|gb|EFT50408.1| thymidylate kinase [Propionibacterium acnes HL053PA2] gi|315082155|gb|EFT54131.1| thymidylate kinase [Propionibacterium acnes HL078PA1] gi|315082702|gb|EFT54678.1| thymidylate kinase [Propionibacterium acnes HL027PA2] gi|315086061|gb|EFT58037.1| thymidylate kinase [Propionibacterium acnes HL002PA3] gi|315087646|gb|EFT59622.1| thymidylate kinase [Propionibacterium acnes HL072PA1] gi|315097318|gb|EFT69294.1| thymidylate kinase [Propionibacterium acnes HL038PA1] gi|315099505|gb|EFT71481.1| thymidylate kinase [Propionibacterium acnes HL059PA2] gi|315101988|gb|EFT73964.1| thymidylate kinase [Propionibacterium acnes HL046PA1] gi|315106312|gb|EFT78288.1| thymidylate kinase [Propionibacterium acnes HL030PA1] gi|315110089|gb|EFT82065.1| thymidylate kinase [Propionibacterium acnes HL030PA2] gi|327331312|gb|EGE73051.1| dTMP kinase [Propionibacterium acnes HL096PA2] gi|327333300|gb|EGE75020.1| dTMP kinase [Propionibacterium acnes HL096PA3] gi|327445223|gb|EGE91877.1| thymidylate kinase [Propionibacterium acnes HL013PA2] gi|327447308|gb|EGE93962.1| thymidylate kinase [Propionibacterium acnes HL043PA1] gi|327450246|gb|EGE96900.1| thymidylate kinase [Propionibacterium acnes HL043PA2] gi|327454514|gb|EGF01169.1| thymidylate kinase [Propionibacterium acnes HL087PA3] gi|327456584|gb|EGF03239.1| thymidylate kinase [Propionibacterium acnes HL083PA2] gi|327457142|gb|EGF03797.1| thymidylate kinase [Propionibacterium acnes HL092PA1] gi|328755566|gb|EGF69182.1| thymidylate kinase [Propionibacterium acnes HL087PA1] gi|328756894|gb|EGF70510.1| thymidylate kinase [Propionibacterium acnes HL025PA2] gi|328761125|gb|EGF74669.1| dTMP kinase [Propionibacterium acnes HL099PA1] Length = 214 Score = 248 bits (633), Expect = 7e-64, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|303251157|ref|ZP_07337341.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307251422|ref|ZP_07533336.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307253501|ref|ZP_07535371.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|302650008|gb|EFL80180.1| thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306856506|gb|EFM88648.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859002|gb|EFM91045.1| Thymidylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 208 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGKTT ++ L++ V TREPGGTP AE RH++ + Sbjct: 2 RGKFIVLEGLEGAGKTTAHQVILAQLEKAGKSVVQTREPGGTPLAEKLRHLIKHETEEAV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQG L++L+E Sbjct: 62 SDKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHLLETLKE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD TI LD+ +GL R + R LD E++ + + RQ +L++ + Sbjct: 122 TVLGNFEPDLTIYLDIDPAVGLARARGR------GELDRIEQQSLDFFYRTRQRYLELTQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 N ++ I+++ S + VA +I V + Sbjct: 176 NN-EKAVIINAEQSIEQVAADIQQAVENFLN 205 >gi|189350690|ref|YP_001946318.1| thymidylate kinase [Burkholderia multivorans ATCC 17616] gi|189334712|dbj|BAG43782.1| dTMP kinase [Burkholderia multivorans ATCC 17616] Length = 207 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 2 MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 62 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVLAAL 207 >gi|169830255|ref|YP_001716237.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C] gi|226732654|sp|B1I165|KTHY_DESAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169637099|gb|ACA58605.1| dTMP kinase [Candidatus Desulforudis audaxviator MP104C] Length = 221 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 87/214 (40%), Positives = 119/214 (55%), Gaps = 8/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG+FI FEGI+GAGKTT ++ L L +N+ V VTREPGGT EA R VLL G E Sbjct: 2 SGVFIVFEGIDGAGKTTQLAYLHEALLSMRNHRVLVTREPGGTRIGEAVRRVLLDTGNSE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA+++AAAR V+RPAL G+I+L DRFLDSS AYQG + L + Sbjct: 62 MTGETEALLYAAARSQFTAEVVRPALARGEIVLSDRFLDSSLAYQGFGRGLELHRLRQVN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD T++LDLPV + R+ + D ER+ V E+ R+ +L++A Sbjct: 122 FLATGGLRPDLTVLLDLPVAAAVARM-------DPDRRDRLEREGVDFFERVRRGYLELA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P IV++ A+ I V L+Q R Sbjct: 175 SADPGHYLIVNAEREAGVCASAIWARVRALLQDR 208 >gi|149914153|ref|ZP_01902684.1| thymidylate kinase [Roseobacter sp. AzwK-3b] gi|149811672|gb|EDM71505.1| thymidylate kinase [Roseobacter sp. AzwK-3b] Length = 208 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEGI+G+GK+T LL L+ DV +TREPGG+P AE R ++L D + Sbjct: 4 GGYFISFEGIDGSGKSTQARLLADHLRGTGRDVVLTREPGGSPGAEEIRALVLEGDGDRW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++F AAR DH+E I PAL G+I++CDRF DS+ YQG + +D L Sbjct: 64 SPETELLLFTAARRDHLERTIAPALEAGQIVICDRFADSTRLYQGLARADLRGLVDQLHS 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI++D+ GL R R + E FE + +K RQ FLD+A+ Sbjct: 124 LMI-GREPDLTILIDMDPATGLGRALARGTGEE-----RFESFGDSMQQKIRQGFLDLAQ 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R VD +VA +I I + Sbjct: 178 EFSARFVTVDGNRQLDAVAADIRQIAEGWL 207 >gi|299769149|ref|YP_003731175.1| thymidylate kinase [Acinetobacter sp. DR1] gi|298699237|gb|ADI89802.1| thymidylate kinase [Acinetobacter sp. DR1] Length = 199 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCTGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S V L + Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198 >gi|221198166|ref|ZP_03571212.1| thymidylate kinase [Burkholderia multivorans CGD2M] gi|221208343|ref|ZP_03581346.1| thymidylate kinase [Burkholderia multivorans CGD2] gi|221215091|ref|ZP_03588058.1| thymidylate kinase [Burkholderia multivorans CGD1] gi|221165027|gb|EED97506.1| thymidylate kinase [Burkholderia multivorans CGD1] gi|221171756|gb|EEE04200.1| thymidylate kinase [Burkholderia multivorans CGD2] gi|221182098|gb|EEE14499.1| thymidylate kinase [Burkholderia multivorans CGD2M] Length = 207 Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 2 MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 61 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 62 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 118 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 119 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFARTRGE 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 173 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVLAAL 207 >gi|314921698|gb|EFS85529.1| thymidylate kinase [Propionibacterium acnes HL050PA3] Length = 214 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|94499607|ref|ZP_01306144.1| thymidylate kinase [Oceanobacter sp. RED65] gi|94428361|gb|EAT13334.1| thymidylate kinase [Oceanobacter sp. RED65] Length = 206 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 80/211 (37%), Positives = 120/211 (56%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+ EG+EG GKTT+I +K +LQ + D VTREPGGT E+ R++LL D Sbjct: 1 MQAGLFITVEGVEGVGKTTNIEYIKNWLQHQGIDYVVTREPGGTDLGESLRNLLLHG--D 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +AE ++ AAR H+E VI+PAL G+ +LCDRF DS++AYQG ++ L Sbjct: 59 DVSDKAELLMMFAARSQHIEKVIKPALAAGRWVLCDRFTDSTFAYQGGGRQLNPEWIRQL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +E+ PD T +LD PV+IG + D E +D++ + R FL Sbjct: 119 ETLVQEELQPDVTFLLDCPVEIGR------ARAAARSASDRIESQDLVFFNRVRDAFLHR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A DR ++D++ V I +++ EL Sbjct: 173 ASLY-DRFRVIDASQDLLQVQQQIESVLVEL 202 >gi|161524554|ref|YP_001579566.1| thymidylate kinase [Burkholderia multivorans ATCC 17616] gi|160341983|gb|ABX15069.1| dTMP kinase [Burkholderia multivorans ATCC 17616] Length = 206 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQHKLAGAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPHVASER---RGAVR---MPDKFESESDAFFTRTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATQSIDEIRQQLERVLAAL 206 >gi|119503325|ref|ZP_01625409.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080] gi|119460971|gb|EAW42062.1| Thymidylate kinase [marine gamma proteobacterium HTCC2080] Length = 215 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 6/216 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++ FI+ EG EG GKTT + L++ L+ + VTREPGGT E R +LL Sbjct: 6 HTAKFITVEGGEGVGKTTQLRLIEARLREAGIPLLVTREPGGTELGEQLRQLLLQKEGLA 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR HV+ VI PAL G+ +LCDRF D+S+AYQG + L Sbjct: 66 PTPMAELLMVFAARAQHVDTVIAPALQRGEWVLCDRFTDASFAYQGFGRGLPLGAIQQLA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E++ + P+ +I+LD+ ++GL+R + R LD FE + + E R +L Sbjct: 126 ELAHPHINPNLSILLDVDPEVGLERARAR------GELDRFELETIPFFEAVRNGYLQRV 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +P R ++D+ + + V + + + E + +S Sbjct: 180 KLEPHRWRVIDAGVALEQVEQQLGDCLKEWIADAIS 215 >gi|163732222|ref|ZP_02139668.1| thymidylate kinase [Roseobacter litoralis Och 149] gi|161394520|gb|EDQ18843.1| thymidylate kinase [Roseobacter litoralis Och 149] Length = 212 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 121/210 (57%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFISFEGI+G+GK+T L L+ + ++V TREPGG+P AE R ++L D + Sbjct: 8 NGLFISFEGIDGSGKSTQSKRLAEHLRVRGHEVVETREPGGSPGAEEIRALVLQGDPDRW 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+ YQG +D+L + Sbjct: 68 SAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLHD 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+++D+ IGL R +R + E FE + K R FL +A+ Sbjct: 128 LMI-GREPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQAKMRAGFLALAQ 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +VD SV +++N+V + + Sbjct: 182 EFKARFRLVDGGRDADSVTQDVINVVDQAL 211 >gi|83943051|ref|ZP_00955511.1| thymidylate kinase [Sulfitobacter sp. EE-36] gi|83846059|gb|EAP83936.1| thymidylate kinase [Sulfitobacter sp. EE-36] Length = 212 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 115/213 (53%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFISFEGI+G+GK+T LLK L+ + V +TREPGG+ AE R ++L D + Sbjct: 6 KGLFISFEGIDGSGKSTQTKLLKDRLEADGHQVVLTREPGGSAGAEEIRALVLQGDPDRW 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A E ++F AAR DH+E I PAL GKI++CDRF DS+ YQG +D L Sbjct: 66 SARTEILLFTAARRDHLERTILPALEAGKIVICDRFADSTRMYQGLSRGDLRGAVDQLHS 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + V PD T+++D+ GL R +R ++ E FE + R FL +A Sbjct: 126 LMI-GVEPDVTVLIDMDPGEGLSRALSRNTVEE-----RFEDFGESLQVAMRAGFLSLAA 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 PDR ++ A S +VA ++ V + R Sbjct: 180 EFPDRFVTINGAQSIDAVAADVFAQVRPRLDAR 212 >gi|325133815|gb|EGC56471.1| thymidylate kinase [Neisseria meningitidis M13399] gi|325143942|gb|EGC66252.1| thymidylate kinase [Neisseria meningitidis M01-240013] gi|325206485|gb|ADZ01938.1| thymidylate kinase [Neisseria meningitidis M04-240196] Length = 206 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++LD A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLDRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIVWE 210 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVLDR 202 >gi|260752471|ref|YP_003225364.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551834|gb|ACV74780.1| thymidylate kinase [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 216 Score = 247 bits (632), Expect = 8e-64, Method: Composition-based stats. Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FIS EG EG GK+T I LL L+ K V TREPGG +A RH+LL + + Sbjct: 10 GYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDLHRW 69 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++FAAAR +HV VI+PAL +GK ++CDRF+DSS AYQG+ + L Sbjct: 70 TNATEALLFAAARAEHVARVIKPALEKGKWVVCDRFIDSSLAYQGDAGGLTQEDIRCLHR 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I Q ++PD T +L LP G++R Q R + + FE++ + H+K FL +A Sbjct: 130 IGSQGILPDRTFLLTLPEGEGIRRAQER----DKNKGNRFEQRTIDYHKKVNDSFLQLAA 185 Query: 183 NQPDRCHIVDSAHSFQSVATN 203 +P+R ++D++ + + V + Sbjct: 186 KEPERFRVIDASGNPEEVHRH 206 >gi|294787793|ref|ZP_06753037.1| dTMP kinase [Simonsiella muelleri ATCC 29453] gi|294484086|gb|EFG31769.1| dTMP kinase [Simonsiella muelleri ATCC 29453] Length = 207 Score = 247 bits (632), Expect = 9e-64, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 8/211 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ FIS +GI+GAGKTT ++++K++ +++N V TREPGGTP E R +LL+ Sbjct: 1 MNA-KFISLDGIDGAGKTTQLNVIKQWFEKQNLPVQFTREPGGTPLGEKLRDILLNP-TS 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR H++++I P L + ++ DRF D+++AYQG + L Sbjct: 59 QINLRTETLLMFAARQQHLDDIILPTLNQNISIVSDRFTDATFAYQGGGRGLPESDIAQL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI+LD+P++I ++R++N S D FER++ + R +L+ Sbjct: 119 ENWVQGSLRPDLTILLDVPLEIAIQRIEN------SREKDRFERENSTFFNQVRTAYLNR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R I+DS+H +S I + + +L Sbjct: 173 AAANPKRYAIIDSSHDKESTKAQIEHALNQL 203 >gi|239501058|ref|ZP_04660368.1| thymidylate kinase [Acinetobacter baumannii AB900] Length = 199 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S V L + Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198 >gi|218767791|ref|YP_002342303.1| thymidylate kinase [Neisseria meningitidis Z2491] gi|304388080|ref|ZP_07370209.1| thymidylate kinase [Neisseria meningitidis ATCC 13091] gi|14285515|sp|Q9JVE7|KTHY_NEIMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|121051799|emb|CAM08105.1| putative thymidylate kinase [Neisseria meningitidis Z2491] gi|304337937|gb|EFM04077.1| thymidylate kinase [Neisseria meningitidis ATCC 13091] gi|319410042|emb|CBY90376.1| thymidylate kinase (dTMP kinase) [Neisseria meningitidis WUE 2594] Length = 206 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 117/205 (57%), Gaps = 7/205 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++++K + +R+ V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTPVGEALREILLNPETKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR+ H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++L+ A P Sbjct: 124 GGLRPDLTLLLDVPLEVSMARIGQ------TREKDRFEQEQADFFMRVRSVYLNRAAACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIVWE 210 +R ++DS V +I ++ Sbjct: 178 ERYAVIDSNLGLDEVRNSIEKVLDR 202 >gi|304391675|ref|ZP_07373617.1| thymidylate kinase [Ahrensia sp. R2A130] gi|303295904|gb|EFL90262.1| thymidylate kinase [Ahrensia sp. R2A130] Length = 215 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 3/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T I L + L+ ++V VTREPGGT AEA RHV+LS F Sbjct: 2 RGHFITFEGGEGAGKSTQIKRLAKKLEDDGHEVVVTREPGGTTGAEAVRHVVLSGAAQPF 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E EA++FAAAR D+V +I+PAL G I+LCDRF+DSS YQG +D L+ Sbjct: 62 GTELEAVLFAAARADNVRELIKPALARGAIVLCDRFMDSSRVYQGASGGVSSNMMDMLER 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T++ DL + GLKR + + D +E + + RR +L IA+ Sbjct: 122 AVTEDARPDLTLLFDLSPEEGLKRAA---DVWKDDGPDRYESEALAQQHIRRDAYLAIAK 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +PDRC I+D++ + ++V+ + ++ + Sbjct: 179 AEPDRCKIIDASKTLRTVSKQVDRVIDNFFAAQ 211 >gi|110680630|ref|YP_683637.1| thymidylate kinase [Roseobacter denitrificans OCh 114] gi|109456746|gb|ABG32951.1| thymidylate kinase [Roseobacter denitrificans OCh 114] Length = 212 Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 118/210 (56%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEGI+G+GK+T L L+ ++V TREPGG+P AE R ++L D + Sbjct: 8 TGFFITFEGIDGSGKSTQSKRLAAHLRASGHEVVETREPGGSPGAEEIRALVLQGDPDRW 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E +I PAL +GKI++CDRF DS+ YQG +D+L E Sbjct: 68 SAETEILLFTAARRDHMERLILPALADGKIVICDRFADSTRMYQGLSRGDLRQVVDTLHE 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+++D+ IGL R +R + E FE + + R FL +A+ Sbjct: 128 LMI-GREPDLTVLIDMDPAIGLSRALSRQTADE-----RFEAFGEDLQTRMRAGFLALAQ 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +VD SVA ++ IV + + Sbjct: 182 EFKARFRLVDGGRDADSVAAEVIKIVDQAL 211 >gi|300311913|ref|YP_003776005.1| thymidylate kinase [Herbaspirillum seropedicae SmR1] gi|300074698|gb|ADJ64097.1| thymidylate kinase protein [Herbaspirillum seropedicae SmR1] Length = 202 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG FI+FEGI+GAGK+THI + + L+ + V TREPGGT E R ++L Sbjct: 1 MASGKFITFEGIDGAGKSTHIPFVTQLLRDRGLTVVATREPGGTELGERLRELVLH---H 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ A+R +H+ VI PAL G ++ DRF D+++AYQG LD L Sbjct: 58 KMHLETEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQGGGRKLALDKLDRL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++ D+P+++ R+ LD FE++ R +L Sbjct: 118 EQWVHPHLQPDLTLLFDVPLEVARARLDA------ERTLDKFEQEKADFFANTRAEYLRR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R ++DS + ++ IV L Sbjct: 172 AAQFPHRFRLIDSTRPIAVIQEDLRAIVAAL 202 >gi|325123060|gb|ADY82583.1| thymidylate kinase [Acinetobacter calcoaceticus PHEA-2] Length = 199 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S V L + Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198 >gi|259047401|ref|ZP_05737802.1| dTMP kinase [Granulicatella adiacens ATCC 49175] gi|259035592|gb|EEW36847.1| dTMP kinase [Granulicatella adiacens ATCC 49175] Length = 215 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 111/208 (53%), Gaps = 4/208 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+ EG +GAGKTT I+ L LQ+ D+ TREPGG+ AE R V+L E Sbjct: 3 GLFITMEGPDGAGKTTVINQLIPLLQKHALVDIVSTREPGGSRIAEDIRKVILDVNNTEM 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAI++AA R H+++ I P L +G I+ CDRF+DSS YQG + L Sbjct: 63 DERTEAILYAAGRRQHLKDRILPNLEKGNIVFCDRFVDSSLVYQGVARGIGVEEVAELNR 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T+ LD+P ++GL+R+ R + D +++ + H R+ +L++ + Sbjct: 123 FATDGLSPSTTLYLDVPAEVGLERIHK---ARGNRQFDRLDQEGLSFHTMVREGYLELLK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R +D+ + + V ++ E Sbjct: 180 KYPERMVSIDATQTIEEVVNECFKVLVE 207 >gi|196233920|ref|ZP_03132757.1| dTMP kinase [Chthoniobacter flavus Ellin428] gi|196221969|gb|EDY16502.1| dTMP kinase [Chthoniobacter flavus Ellin428] Length = 218 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 7/224 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59 M G+F+SFEG EG GK+T I LL L+ + V +TREPGGT E RH+L S Sbjct: 1 MPRGIFVSFEGSEGCGKSTQIRLLADRLKALGHQVILTREPGGTEIGEQLRHLLQFSKAG 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E E ++FAA+R V VI PAL G I+L DRFLDS+ YQG + + Sbjct: 61 HAMASETELLLFAASRAQLVREVIAPALEAGAIVLADRFLDSTTVYQGVARKLDPAEVAA 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +V + +PD T + DL + I +R+++R + + D E + E R +L Sbjct: 121 INRFAVGDTLPDITFVFDLDLAIARERMRHRPAP--AGAPDRMESQPAAFFEAVRAGYLA 178 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +AR R ++D+A + + ++ I W+ + R+SPL K Sbjct: 179 LARENTTRVRLLDAAGTVEDLSNRI----WQELAPRLSPLPVTK 218 >gi|170703706|ref|ZP_02894432.1| dTMP kinase [Burkholderia ambifaria IOP40-10] gi|171319768|ref|ZP_02908855.1| dTMP kinase [Burkholderia ambifaria MEX-5] gi|170131388|gb|EDS99989.1| dTMP kinase [Burkholderia ambifaria IOP40-10] gi|171095004|gb|EDT40029.1| dTMP kinase [Burkholderia ambifaria MEX-5] Length = 206 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAASGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVLAAL 206 >gi|325520827|gb|EGC99827.1| thymidylate kinase [Burkholderia sp. TJI49] Length = 206 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGRLASAGKQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFTRTRSE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVLAAL 206 >gi|260459470|ref|ZP_05807725.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075] gi|259035024|gb|EEW36280.1| thymidylate kinase [Mesorhizobium opportunistum WSM2075] Length = 248 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 99/215 (46%), Positives = 138/215 (64%), Gaps = 2/215 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EGAGK+T I L R ++ K YDV +TREPGG+P AEA RHVLLS + Sbjct: 25 LARGFFITFEGGEGAGKSTQIERLARKMRAKKYDVLLTREPGGSPGAEAVRHVLLSGAAE 84 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 FG + EA++FAAAR DHVE VIRPA+ G I+LCDRFLDSS YQG F+ +L Sbjct: 85 PFGPKMEALLFAAARSDHVEQVIRPAVERGSIVLCDRFLDSSRVYQGVTGGIDPAFMATL 144 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++++ +MPD T+I D+ GL+R R + A D FE++ + IH+ RR FL I Sbjct: 145 EQVAINGMMPDMTLIFDIDPAEGLRRATLRRGSDDGA--DRFEKETLAIHQARRAAFLAI 202 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A +P+RC +VD++ +V + V+ ++ R Sbjct: 203 AAAEPERCIVVDASAKPDTVEDVVTAAVFAALEAR 237 >gi|315633633|ref|ZP_07888923.1| dTMP kinase [Aggregatibacter segnis ATCC 33393] gi|315477675|gb|EFU68417.1| dTMP kinase [Aggregatibacter segnis ATCC 33393] Length = 210 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI EG+EGAGK+T + L+ DV TREPGGTP AE RH++ + Sbjct: 2 AGKFIVIEGLEGAGKSTAHQCVVDTLKELGVNDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG FL L+ Sbjct: 62 VTDKAELLMLYAARIQLVDNVIKPALAKGKWVVGDRHDMSSQAYQGGGRQLGAAFLTHLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +I + + PD T+ LD+ +GL R + R LD E++ + + R +L++ Sbjct: 122 QIVLGDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQHLDFFHRTRARYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 176 KDNP-KAVMINAEQSIEQVQADIKSAVKNW 204 >gi|49475610|ref|YP_033651.1| thymidylate kinase [Bartonella henselae str. Houston-1] gi|59798266|sp|Q6G5D6|KTHY_BARHE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49238417|emb|CAF27644.1| Thymidylate kinase [Bartonella henselae str. Houston-1] Length = 215 Score = 247 bits (631), Expect = 1e-63, Method: Composition-based stats. Identities = 93/215 (43%), Positives = 134/215 (62%), Gaps = 3/215 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 SG FI+FEG EG GKTT I LL + L K YDV TREPGGT AE RH+LLS V + Sbjct: 2 SGYFITFEGGEGVGKTTQIFLLAQHLYGKGYDVLTTREPGGTAGAEVIRHILLSGQVQQH 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +G EAI+F AAR+DHV VI P+L +GK++LCDRF+DS+ YQG D L L+ Sbjct: 62 YGPLIEAILFTAARIDHVSEVIMPSLQKGKVVLCDRFIDSTRVYQGLNDKVSSSTLAVLE 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ ++ P T +LD+P +KR R E +DYFE+ ++ I E+RRQ FL +A Sbjct: 122 CLALNKIKPQITFLLDIPARCSMKRANLRREKAE--TIDYFEKDELKIQEQRRQAFLQLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + +P R ++D + + +A I +I +++ ++ Sbjct: 180 KQEPHRFRVIDGTDTVEVIAQQIRDICDQVMLDQL 214 >gi|282853298|ref|ZP_06262635.1| dTMP kinase [Propionibacterium acnes J139] gi|282582751|gb|EFB88131.1| dTMP kinase [Propionibacterium acnes J139] gi|314922387|gb|EFS86218.1| thymidylate kinase [Propionibacterium acnes HL001PA1] gi|314965424|gb|EFT09523.1| thymidylate kinase [Propionibacterium acnes HL082PA2] gi|314982835|gb|EFT26927.1| thymidylate kinase [Propionibacterium acnes HL110PA3] gi|315091154|gb|EFT63130.1| thymidylate kinase [Propionibacterium acnes HL110PA4] gi|315104893|gb|EFT76869.1| thymidylate kinase [Propionibacterium acnes HL050PA2] gi|327329219|gb|EGE70979.1| dTMP kinase [Propionibacterium acnes HL103PA1] Length = 214 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R ++++ S + ++ I V L+ Sbjct: 183 AHPQRYLVLNARKSRKEISEAICQRVTGLLN 213 >gi|115351881|ref|YP_773720.1| thymidylate kinase [Burkholderia ambifaria AMMD] gi|172060851|ref|YP_001808503.1| thymidylate kinase [Burkholderia ambifaria MC40-6] gi|122323022|sp|Q0BEN7|KTHY_BURCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487583|sp|B1YRL3|KTHY_BURA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|115281869|gb|ABI87386.1| thymidylate kinase [Burkholderia ambifaria AMMD] gi|171993368|gb|ACB64287.1| dTMP kinase [Burkholderia ambifaria MC40-6] Length = 206 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATQSIPEIRQQLERVLAAL 206 >gi|293399977|ref|ZP_06644123.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306377|gb|EFE47620.1| dTMP kinase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 211 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 6/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+FEG +G+GKTT + L Y V TREPGG AE RHV+L Sbjct: 2 MKKGLFITFEGNDGSGKTTISKMAYEKLLDMGYPVVYTREPGGIDIAEQIRHVILDPKNT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA+++AA+R H+ + PAL + +I+LCDRF+DSS YQG + + Sbjct: 62 AMDARCEALLYAASRRQHLVEKVLPALAKHQIVLCDRFVDSSLVYQGIARGIGIEEVYKI 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E +++ +PD TI L + + GL R++ R D + + + H+ + + I Sbjct: 122 NEFAIEGHLPDATIFLHVDLHTGLSRIETR------GEKDRLDNESMKFHQMVSEGYDTI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R H++D+ S + V + + E++ Sbjct: 176 REMFHERMHVIDATKSIEDVLKATIECLLEIIN 208 >gi|254417944|ref|ZP_05031668.1| thymidylate kinase [Brevundimonas sp. BAL3] gi|196184121|gb|EDX79097.1| thymidylate kinase [Brevundimonas sp. BAL3] Length = 210 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 7/214 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G FISFEG EG+GK+T + L LQ V TREPGG+ AE R+++++ Sbjct: 1 MTRGKFISFEGGEGSGKSTQVGRLVERLQPVLGERTVVRTREPGGSKGAEVIRNLVVATE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + A E ++ A+R DH+E IRPAL G ++CDRF DSS AYQG F++ Sbjct: 61 AEPWSAMTETLLMYASRSDHLERTIRPALAAGDWVVCDRFADSSRAYQGAGGGVAQSFIE 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + V + PD T++ DLPV++GL+R R FE K + H++ R+ FL Sbjct: 121 QIDAGVVGDDQPDLTLVFDLPVEVGLERAFGRGLFET-----RFESKGLAFHKRLREGFL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I P+RC ++D+ S V + V + + Sbjct: 176 RIVEAHPERCVLIDAVGSLDEVEARVWQAVQDRL 209 >gi|296157859|ref|ZP_06840693.1| thymidylate kinase [Burkholderia sp. Ch1-1] gi|295892105|gb|EFG71889.1| thymidylate kinase [Burkholderia sp. Ch1-1] Length = 206 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+S + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLDPEIASERRSA------ARDPDRFESESEAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DSA S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSAQSITQIQRRLEELI 203 >gi|147669348|ref|YP_001214166.1| thymidylate kinase [Dehalococcoides sp. BAV1] gi|189028832|sp|A5FR84|KTHY_DEHSB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146270296|gb|ABQ17288.1| thymidylate kinase [Dehalococcoides sp. BAV1] Length = 208 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 7/208 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++K +T EPGG+ + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKKGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A+R ++NVI+PAL +GKI++CDR+ DS+ AYQG + + ++ Sbjct: 63 LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQGYGRGLDLDTVKCVNSLA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD TI LD+ L R + D FE ++ H++ R F I + Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIYATE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR +D++ + + I V L+ Sbjct: 176 PDRFLKLDASLPQSEIFSRIKQRVTILL 203 >gi|315094240|gb|EFT66216.1| thymidylate kinase [Propionibacterium acnes HL060PA1] Length = 214 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT + LL ++L + +TREPG + + R ++LS Sbjct: 12 GGVFVVFEGGDGAGKTTQVRLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPDSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + L Sbjct: 72 SSRAEALLYNADKAQHVDEVVIPALREGKVVVCDRYVDSTIAYQGAGRVLDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R ++++ S + ++ I V L+ Sbjct: 183 AHPQRYLVLNARKSRKEISEAICQRVTGLLN 213 >gi|116495711|ref|YP_807445.1| thymidylate kinase [Lactobacillus casei ATCC 334] gi|191639199|ref|YP_001988365.1| thymidylate kinase [Lactobacillus casei BL23] gi|122262887|sp|Q035W9|KTHY_LACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238693006|sp|B3W9Y8|KTHY_LACCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116105861|gb|ABJ71003.1| thymidylate kinase [Lactobacillus casei ATCC 334] gi|190713501|emb|CAQ67507.1| Thymidylate kinase (dTMP kinase) [Lactobacillus casei BL23] gi|327383275|gb|AEA54751.1| Thymidylate kinase [Lactobacillus casei LC2W] gi|327386459|gb|AEA57933.1| Thymidylate kinase [Lactobacillus casei BD-II] Length = 214 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 4/209 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ + L L++ +H+TREPGG +E R V+L Sbjct: 2 TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL +G I++CDRF+DSS AYQG + + Sbjct: 62 MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P T+ LD+PV +GL R+++ + R+ D +++ + HE+ ++ + Sbjct: 122 QFATAGLEPALTLYLDVPVQVGLDRIKSHQNERQY---DRLDQESLAFHERVHDAYMTLI 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P R +D+ + V + Sbjct: 179 VDNPQRIVSIDATEPLEKVVAACFQTITR 207 >gi|293609834|ref|ZP_06692136.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828286|gb|EFF86649.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 199 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 108/205 (52%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEHGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEANKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S V L + Sbjct: 174 EPERIKRIDATQSPDQVFEQALQYL 198 >gi|189499981|ref|YP_001959451.1| dTMP kinase [Chlorobium phaeobacteroides BS1] gi|189495422|gb|ACE03970.1| dTMP kinase [Chlorobium phaeobacteroides BS1] Length = 217 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 109/207 (52%), Gaps = 4/207 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T + LK++L K +V REPGGT AE R +LL D Sbjct: 1 MLITFEGIDGAGKSTQVKKLKKYLVEKGREVLTLREPGGTVVAEKIRELLLESKHD-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V+ VI P L + K+++ DRF DS+ AYQG L + +IS Sbjct: 60 MGELLLFSASRAELVQQVILPELEKSKVIILDRFFDSTTAYQGYGRGLDLNMLQKINDIS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + SL E+ +D E + +++ R+ +L +A Sbjct: 120 TFGLQPDLTFFLDISPEDALIRKFSEKSLPLAFENNEMDRMESSGLSFYQRVREGYLKLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + R + D+ S+ I+ V Sbjct: 180 IAEKKRFVLFDACADPDSIHAQIIQKV 206 >gi|19745549|ref|NP_606685.1| thymidylate kinase [Streptococcus pyogenes MGAS8232] gi|139474335|ref|YP_001129051.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo] gi|23821763|sp|Q8P2B1|KTHY_STRP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223120|sp|A2RG70|KTHY_STRPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|19747670|gb|AAL97184.1| putative thymidylate kinase [Streptococcus pyogenes MGAS8232] gi|134272582|emb|CAM30849.1| thymidylate kinase [Streptococcus pyogenes str. Manfredo] Length = 211 Score = 246 bits (630), Expect = 1e-63, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G I+ EG +GAGKTT + L L++K ++ TREPGG +E R ++L Sbjct: 1 MITGKLITVEGPDGAGKTTVLEQLIPPLKQKVAQEILTTREPGGVAISEYIRELILDINH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PAL G+++ DRF+DSS AYQG + Sbjct: 61 TTMDPKTELLLYIAARRQHLVEKVLPALEAGQLVFIDRFIDSSVAYQGAGRGLIKADIQW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E + + PD T+ D+P +IGL R+ ++ + + + IH++ R+ +L Sbjct: 121 LNEFATDGLEPDLTLYFDVPSEIGLARINANQ----QREVNRLDLETIEIHQRVRKGYLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ P R +D+ + V + L V L+ Sbjct: 177 LAKEHPKRIVTIDATKPLKEVVSVALEHVLALL 209 >gi|329117616|ref|ZP_08246333.1| dTMP kinase [Streptococcus parauberis NCFD 2020] gi|326908021|gb|EGE54935.1| dTMP kinase [Streptococcus parauberis NCFD 2020] Length = 218 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 ++ GL I+FEG +GAGKT+ + L L+ + + ++ TREPGG AE R V+L Sbjct: 8 LSKGLIITFEGPDGAGKTSVLEALLPLLKAEFDKELITTREPGGVAIAEEIREVILDVNN 67 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +++ AAR H+ + PA GKI+L DRF+DSS AYQG + Sbjct: 68 TAMDYKTELLLYIAARRQHLVEKVLPAKEAGKIVLMDRFIDSSVAYQGSGRGLDKADIQW 127 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + V PD T+ D+P +GL R+ + ++ + + + +H+ R +L+ Sbjct: 128 LNDFATDGVDPDLTLYFDVPSSVGLARIAKNRTHE----VNRLDLEKLEMHQAVRNGYLE 183 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ P+R +D+++ + V ++ N + + Sbjct: 184 LAKENPNRIVTIDASNVLEQVISDAFNAIKAKLN 217 >gi|257869781|ref|ZP_05649434.1| thymidylate kinase [Enterococcus gallinarum EG2] gi|257803945|gb|EEV32767.1| thymidylate kinase [Enterococcus gallinarum EG2] Length = 215 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 112/210 (53%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLFI+ EG +GAGKT+ + L LQ D+ TREPGG AE R ++L E Sbjct: 2 SGLFITIEGPDGAGKTSVLEELYPRLQLEAKRDIVKTREPGGVKIAEKIRRIILDPKNSE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ VI PAL EGKI++CDRF+DSS AYQG + + Sbjct: 62 MDERTEALLYAAARRQHLIQVILPALNEGKIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R+Q + LD + + + H++ R +L +A Sbjct: 122 EFATEGTEPDFTLYLDVDSDTGLRRIQE----HRAHQLDRLDAEGLEFHQRVRHAYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P R H VD+ Q V + + E Sbjct: 178 EENPVRIHKVDARMGLQDVVETSFSAIVEA 207 >gi|239618400|ref|YP_002941722.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1] gi|259494274|sp|C5CHP2|KTHY_KOSOT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|239507231|gb|ACR80718.1| thymidylate kinase [Kosmotoga olearia TBF 19.5.1] Length = 208 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 116/210 (55%), Gaps = 7/210 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEGI+G+GK+T ++L + +L+R + + REPGGT A E R +LL F Sbjct: 1 MFISFEGIDGSGKSTQVALFREYLERNSMEYVFIREPGGTQAGEDIREILLHNEYKLF-P 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++F A+R V VI PAL + K++L DRFLDSS AYQG + +L E S Sbjct: 60 ETELLLFMASRAQIVREVIIPALKKKKLVLADRFLDSSVAYQGYGRGLSIQMVTTLNEFS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V P T+ +D+PVD+ +KR+ R D E + + ++ RQ +L++A+ Sbjct: 120 TGGVTPHLTLFIDVPVDVAVKRM------RREMKHDKIEMESLDFFKRVRQGYLELAKRD 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D S + + ++ ++K Sbjct: 174 PKRILVIDGTMSVEKIHEQVVKEFLLCLKK 203 >gi|227495669|ref|ZP_03925985.1| thymidylate kinase [Actinomyces coleocanis DSM 15436] gi|226830901|gb|EEH63284.1| thymidylate kinase [Actinomyces coleocanis DSM 15436] Length = 243 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 115/216 (53%), Gaps = 9/216 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL+I+FEG E GKTT I L + +L+ Y + V+REPGGT + R+++L G + Sbjct: 21 GLYITFEGGEACGKTTQIELTQNWLRDLGYQLTVSREPGGTELGQQLRNLILH-GPKDID 79 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +++ A R HV IRPAL G++++ DR+ DS+ AYQG + L Sbjct: 80 PRCEVLLYLADRAYHVATKIRPALEAGQVVVQDRYFDSAVAYQGAARKLGVSEVRDLNLW 139 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V+ ++P+ T +LD+ + ++R + D E + H K R+ +L +A Sbjct: 140 AVEGLIPEITFLLDIDPRVSMQR--------RAGATDRIEEEPSAFHIKVREQYLALAAA 191 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 +P R H+++++ S + + I ++ ++K+ L Sbjct: 192 EPQRFHVLNASDSIEELQAQIREVLLGALEKKTGLL 227 >gi|327334819|gb|EGE76530.1| dTMP kinase [Propionibacterium acnes HL097PA1] Length = 214 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ FEG +GAGKTT LL ++L + +TREPG + + R ++LS G Sbjct: 12 GGVFVVFEGGDGAGKTTQARLLDQWLTTEGIPHLMTREPGDSWLGQRIRELVLSPGSGPI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EGK+++CDR++DS+ AYQG + + L Sbjct: 72 SSRAEALLYNADKAQHVDGVVIPALREGKVVVCDRYVDSTIAYQGAGRALDPGEVGQLAC 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FLD+A Sbjct: 132 WATTGLVPDVTVLLDVDPCEGAGKIAAK---------DRLEAAGDEFHLRVRQHFLDLAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ S + ++ I V L+ + Sbjct: 183 AHPQRYLVLNARKSRKEISEAIRQRVTGLLNR 214 >gi|261822056|ref|YP_003260162.1| thymidylate kinase [Pectobacterium wasabiae WPP163] gi|261606069|gb|ACX88555.1| thymidylate kinase [Pectobacterium wasabiae WPP163] Length = 219 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 120/217 (55%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT +++ L+ +V TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R + R LD E++ + ++ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRFRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A D +D+A S +V+ +I + + +Q++ Sbjct: 174 ELAAED-DSILTIDAAQSIDAVSADIQAALQQWLQRQ 209 >gi|325266947|ref|ZP_08133618.1| dTMP kinase [Kingella denitrificans ATCC 33394] gi|324981688|gb|EGC17329.1| dTMP kinase [Kingella denitrificans ATCC 33394] Length = 218 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 7/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+G+GKTT +++++ + + V TREPGGTP E R +LL Sbjct: 7 FITLDGIDGSGKTTQLNVIREWFAARKMPVVFTREPGGTPLGEKLRELLLDPQT-RVSLR 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E+V+ PAL +G ++ DRF D+++AYQG ++ L++ Sbjct: 66 TETLLMFAARRQHLEDVVLPALAQGIHVVSDRFTDATFAYQGGGRGLPTAEVEVLEDWVQ 125 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI+LD+P+++ + R++ S D FER+D + R +L A P Sbjct: 126 GSLRPDLTILLDVPLEVSVARIEG------SRDKDRFEREDSAFFARVRAAYLQRAAQSP 179 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 R +++S V +I ++ L + Sbjct: 180 QRYAVINSHRDKAEVKQDIEAVLNRLFR 207 >gi|114704619|ref|ZP_01437527.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506] gi|114539404|gb|EAU42524.1| THYMIDYLATE KINASE [Fulvimarina pelagi HTCC2506] Length = 226 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 93/210 (44%), Positives = 135/210 (64%), Gaps = 3/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEG +G+GKTT + L + L+ +DV TREPGGTP A+A RHV+LS +F Sbjct: 2 AGKFITFEGGDGSGKTTQVLRLAKMLREYGFDVVTTREPGGTPGADAIRHVVLSGAARDF 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DH++ VIRPAL EG I++CDRF DS+ YQ FLD L+ Sbjct: 62 GPNIEAVLFAAARADHLDKVIRPALEEGAIVICDRFHDSTRVYQAATKDLDLAFLDRLET 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ V PD TIILD+P ++G +R + R S E+ D FE + +H +RR+ FL IA Sbjct: 122 ATLDGVAPDLTIILDVPAELGYERAKARRSEAEA---DRFESDALDVHAERRERFLAIAE 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++PDRC ++D + +A +I+ + + + Sbjct: 179 DEPDRCVVIDGRGEEEEIAEDIVAALEDRL 208 >gi|229159205|ref|ZP_04287230.1| Thymidylate kinase [Bacillus cereus R309803] gi|228624220|gb|EEK81021.1| Thymidylate kinase [Bacillus cereus R309803] Length = 208 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ E + Sbjct: 178 RFSDRIVVVNADQPMEQLIEEVVQIIEEKL 207 >gi|170692442|ref|ZP_02883605.1| dTMP kinase [Burkholderia graminis C4D1M] gi|170142872|gb|EDT11037.1| dTMP kinase [Burkholderia graminis C4D1M] Length = 206 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R + D FE + E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFESESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R I+DS+ S + + ++ L Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEELIASL 206 >gi|170718663|ref|YP_001783858.1| thymidylate kinase [Haemophilus somnus 2336] gi|189028835|sp|B0URV9|KTHY_HAES2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|168826792|gb|ACA32163.1| dTMP kinase [Haemophilus somnus 2336] Length = 210 Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 117/217 (53%), Gaps = 8/217 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EG+EGAGK++ ++ L ++V TREPGGTP AE R+++ Sbjct: 1 MKTGKFIVIEGLEGAGKSSTHQVVVNTLTEFGIHEVVFTREPGGTPLAEKLRYLIKHEAE 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+AE ++ AAR+ VENVI+PAL GK ++ DR SS AYQG + + Sbjct: 61 ELVTAKAELLMLYAARVQLVENVIKPALARGKWVVGDRHDLSSQAYQGGGRGLDRHLMTT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ + + PD T+ LD+ +IGL R + R LD E++++ + R+ +L Sbjct: 121 LKNAVLGDFKPDFTLYLDIEPEIGLARAKGR------GELDRIEQQNLDFFHRTRERYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + + P+ ++++ + V +I V + +++ V Sbjct: 175 LVQQDPN-AVLINAGQPIELVQQDIRKAVQKFIEENV 210 >gi|220911618|ref|YP_002486927.1| dTMP kinase [Arthrobacter chlorophenolicus A6] gi|219858496|gb|ACL38838.1| dTMP kinase [Arthrobacter chlorophenolicus A6] Length = 232 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 114/216 (52%), Gaps = 8/216 (3%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN GLFI+FEG +GAGK+T + L L+ + V TREPGGTP E R ++L Sbjct: 1 MNKHSAGLFIAFEGGDGAGKSTQAARLAEALESRGLTVLRTREPGGTPIGEKLRSLVLDH 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G A EA++FAA+R H VIRPAL G I+L DR++DSS AYQG + Sbjct: 61 GHGHIDAHTEALIFAASRAAHAGQVIRPALERGDIVLTDRYIDSSVAYQGAGRDLGMDAV 120 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL E + + P T++LD+ ++G R A D E + H + R+ F Sbjct: 121 RSLNEWATSGLQPHLTVLLDVEPEVGRTR-----RTAGDATEDRLESEADEFHARIREAF 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 LD+A +P ++ + +A IL+ V+ L++ Sbjct: 176 LDLAAARPASYLVLPARLPVNDLAAMILDRVFGLLE 211 >gi|227486758|ref|ZP_03917074.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172] gi|227235228|gb|EEI85243.1| possible dTMP kinase [Anaerococcus lactolyticus ATCC 51172] Length = 207 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 7/214 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G FI FEG +G+GKTT I +K L+ K+Y + REPGGT +E R +++ Sbjct: 1 MN-GKFIVFEGPDGSGKTTIIKKVKELLENKDYSISYYREPGGTSISEKIRSIIIDNDNY 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ EA++FA++R V I P L EGKI++CDRF+ SS YQG + + ++ Sbjct: 60 MMDAKTEALLFASSRAQLVAEKITPDLKEGKIVICDRFVMSSLLYQGLGRALGVDNIKTI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ ++ L+R + +S D E +D H+ ++ + Sbjct: 120 NDFATGGLKPDLTLFFNIDYKTALERKRANFS------PDRLENEDFSFHKTIFDGYMKM 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A D VD+ S + + +++NI+++L++ Sbjct: 174 ADLYKDEIKKVDARKSIEDLTEDVINIIYQLLED 207 >gi|269955162|ref|YP_003324951.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894] gi|269303843|gb|ACZ29393.1| thymidylate kinase [Xylanimonas cellulosilytica DSM 15894] Length = 281 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 11/211 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+SFEG +G GKTT LL +L +V VTREPGGT R ++L ++ Sbjct: 4 RGYFVSFEGGDGGGKTTQARLLGDWLGTALGREVVVTREPGGTALGATLRQLILHG--ED 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R HV +++RPAL G +++ DR+LDSS AYQ ++ L Sbjct: 62 MDPRTEALLYAADRAHHVASLVRPALERGAVVITDRYLDSSVAYQSGGRELSEQEVEDLS 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +V+ ++PD TI+LD+ + R+ S LD ER D ++ R + A Sbjct: 122 LWAVRGLLPDVTILLDVDLATSGARM--------SGDLDRLERVDDAFRQRTRDAYHRRA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +VD+A + + V + V E + Sbjct: 174 AADPARWVVVDAAGTVEEVHAQVRAAVAERL 204 >gi|298244278|ref|ZP_06968084.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] gi|297551759|gb|EFH85624.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] Length = 217 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 113/213 (53%), Gaps = 1/213 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+ ISFEG++GAGKTT ++LL+ +LQ + TREPGG+P R +LL+ Sbjct: 1 MERGVLISFEGLDGAGKTTQMNLLEAWLQSQGVSYLRTREPGGSPLGVEIRRLLLNRPDL 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA++F A R H VI PAL EGK+++ DR DSS AYQG ++ L Sbjct: 61 HISPLAEALLFQADRAQHFAEVILPALDEGKVIVSDRCFDSSIAYQGAARGVGEQLVEDL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179 ++ Q PD TI+LDLP + +R + +F+R+ H R+ FL Sbjct: 121 SLLATQGHQPDLTIMLDLPPEKVQQRTNLAVDQGGTRTEQSHFDRETETFHRTLREAFLT 180 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +AR P R ++D++ + + + I V L+ Sbjct: 181 LARRHPQRIKVLDASRTPEVIQREIQGHVERLL 213 >gi|259415239|ref|ZP_05739161.1| thymidylate kinase [Silicibacter sp. TrichCH4B] gi|259349149|gb|EEW60903.1| thymidylate kinase [Silicibacter sp. TrichCH4B] Length = 214 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEGI+G+GK++ LL L+ +V TREPGG+ AE R ++L D + Sbjct: 8 GLFLTFEGIDGSGKSSQCRLLADHLRGLGREVVQTREPGGSAGAEEIRSLVLEGDPDRWS 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +DSL ++ Sbjct: 68 AETEILLFTAARRDHLERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRATVDSLHKL 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TI++D+ + GL R + R E FE + + EK R FL +A Sbjct: 128 MI-GREPDVTILIDMDPETGLARAKGRQGTEE-----RFEDFGLALQEKMRAGFLSLADE 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 DR IVD A +VA +I I + +R Sbjct: 182 FADRFRIVDGAQDMNAVAADIARIAEAELDQR 213 >gi|260551489|ref|ZP_05825673.1| thymidylate kinase [Acinetobacter sp. RUH2624] gi|260405483|gb|EEW98976.1| thymidylate kinase [Acinetobacter sp. RUH2624] Length = 199 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 111/205 (54%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALASNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + ++ Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKS 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S + V L + Sbjct: 174 EPERIKRLDATQSPEQVFEQALQYL 198 >gi|169795088|ref|YP_001712881.1| thymidylate kinase [Acinetobacter baumannii AYE] gi|213158250|ref|YP_002320301.1| thymidylate kinase [Acinetobacter baumannii AB0057] gi|215482638|ref|YP_002324830.1| thymidylate kinase [Acinetobacter baumannii AB307-0294] gi|294836647|ref|ZP_06781330.1| thymidylate kinase [Acinetobacter sp. 6013113] gi|294860782|ref|ZP_06798551.1| thymidylate kinase [Acinetobacter sp. 6013150] gi|301345832|ref|ZP_07226573.1| thymidylate kinase [Acinetobacter baumannii AB056] gi|301512395|ref|ZP_07237632.1| thymidylate kinase [Acinetobacter baumannii AB058] gi|301594756|ref|ZP_07239764.1| thymidylate kinase [Acinetobacter baumannii AB059] gi|226732648|sp|B7GYE0|KTHY_ACIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732649|sp|B7I585|KTHY_ACIB5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487546|sp|B0VCV4|KTHY_ACIBY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169148015|emb|CAM85878.1| thymidylate kinase [Acinetobacter baumannii AYE] gi|213057410|gb|ACJ42312.1| thymidylate kinase [Acinetobacter baumannii AB0057] gi|213987116|gb|ACJ57415.1| thymidylate kinase [Acinetobacter baumannii AB307-0294] Length = 199 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHNENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQN 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 121 FVSS-MPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S V L + Sbjct: 174 EPERIKRLDATQSPDQVFEQALQYL 198 >gi|307729688|ref|YP_003906912.1| thymidylate kinase [Burkholderia sp. CCGE1003] gi|307584223|gb|ADN57621.1| thymidylate kinase [Burkholderia sp. CCGE1003] Length = 206 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH++ + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLAWFRERLEQKVAATGRAVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R + D FER+ E+ R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFERESAAFFERTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R I+DS+ S + + +++ +L Sbjct: 172 YLRRAEEAPYRFAIIDSSQSIVRIQKQLEDLLAKL 206 >gi|56551986|ref|YP_162825.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4] gi|56543560|gb|AAV89714.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ZM4] Length = 216 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FIS EG EG GK+T I LL L+ K V TREPGG +A RH+LL + + Sbjct: 10 GYFISLEGGEGVGKSTQIRLLAAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDLHRW 69 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++FAAAR +HV VI+PAL EGK ++CDRF+DSS AYQG+ + L Sbjct: 70 TNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQGDIRCLHR 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I Q ++PD T +L LP G++R Q R + + FE++ + H+K FL +A Sbjct: 130 IGSQGILPDRTFLLTLPEGEGIRRAQER----DKNKGNRFEQRTIDYHKKVNDSFLQLAA 185 Query: 183 NQPDRCHIVDSAHSFQSVATN 203 +P+R ++D++ + + V + Sbjct: 186 KEPERFRVIDASGNPEEVHRH 206 >gi|237756554|ref|ZP_04585078.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691282|gb|EEP60366.1| thymidylate kinase [Sulfurihydrogenibium yellowstonense SS-5] Length = 204 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 114/207 (55%), Gaps = 8/207 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGIE +GKTT I+LL +L+ +V TREPGGT + R +LLS ++F Sbjct: 2 GFFITFEGIEASGKTTQINLLYDYLKSIGKNVIKTREPGGTKIGQKIREILLSKWDEKFP 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ A R H+ N+I+P+L I+L DR++DS+ AYQ + + L + Sbjct: 62 YIAELLLYEADRNIHIHNIIKPSLEADYIVLSDRYIDSTTAYQHYARGIDYEIVSYLNTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P+ T ++D+P I LKR+ D E +D+ H+K R+ FL IA N Sbjct: 122 ATDRLKPNLTFLIDIPAQISLKRLSK--------TKDRIESEDIEFHKKLREGFLKIAEN 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 + DR ++D + I++ + + Sbjct: 174 EKDRFVVIDGTMDIMEIHKIIVDTLKQ 200 >gi|73541128|ref|YP_295648.1| thymidylate kinase [Ralstonia eutropha JMP134] gi|123625155|sp|Q471X9|KTHY_RALEJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72118541|gb|AAZ60804.1| thymidylate kinase [Ralstonia eutropha JMP134] Length = 203 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 11/211 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60 G FI+FEGI+GAGK+THI + L+ + V TREPGGTP E R +LL Sbjct: 2 RGKFITFEGIDGAGKSTHIGAVAARLRERKDIPAVVTTREPGGTPLGEDLRQILLH---R 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG L++L Sbjct: 59 KMHLETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQGGGRGLATSRLETL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T++ D+P++ +R+ + D FE + E+ R +L Sbjct: 119 ETWVQDGLQPDLTLLFDVPLETASERLAG------AREPDKFEAESRAFFERTRAEYLRR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P+R ++D+ S +++ + I+ L Sbjct: 173 AAQAPERFRVIDATQSIEAIRVELEKIISTL 203 >gi|227510683|ref|ZP_03940732.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227189804|gb|EEI69871.1| thymidylate kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 216 Score = 246 bits (628), Expect = 3e-63, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 117/210 (55%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ + Q++ + VTREPGG +E R V+L E Sbjct: 2 TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL K++LCDR++DSS AYQG + + Sbjct: 62 MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++++P TI D+PV++GL R+ R+S+ +D + + H++ Q ++ + Sbjct: 122 EFATEKILPYKTIYFDIPVEVGLNRIAK---HRDSSKIDRLDVETTAFHKRVHQGYMKLI 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 DR I+D+ + V + +++ ++ Sbjct: 179 GEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208 >gi|224475615|ref|YP_002633221.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420222|emb|CAL27036.1| thymidylate kinase [Staphylococcus carnosus subsp. carnosus TM300] Length = 204 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT + + L ++YDV TREPGG PAAE R +LL + Sbjct: 4 FITFEGPEGSGKTTVLQRVAERL-SQDYDVLKTREPGGVPAAEQIREILLDG--EAVDDR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL E K++LCDR++DSS AYQG + ++ E ++ Sbjct: 61 TEALLFAASRREHLVEKVLPALKEDKVVLCDRYIDSSLAYQGFARGIGVEEVRAINEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ + G +R++N ++ + + + H++ + + D+ +P Sbjct: 121 NGLYPDLTIYLDITAETGRERIEN-----NDRNMNRLDHESIAFHQRVIKGYHDLIDKEP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R ++D+ ++V + + + K Sbjct: 176 ERFKVIDANQELEAVVEDTYTAIKMFLGK 204 >gi|330446410|ref|ZP_08310062.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490601|dbj|GAA04559.1| thymidylate kinase [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 209 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 119/214 (55%), Gaps = 9/214 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE- 61 G FI EG+EGAGK+T I+ + L + D TREPGGTP AE R ++ DE Sbjct: 3 GKFIVIEGLEGAGKSTAINQVMDTLAQHGINDPVSTREPGGTPLAEQMRALVKEGHPDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG +++L+ Sbjct: 63 LTDMAELLLLYAARIQLVDNVIKPALNQGKWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI +D+ ++GL+R + R LD E+ ++ + R FL+++ Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRVRARFLELS 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 NQP+ I+D++ + + V + + + ++++ Sbjct: 177 ENQPN-VIIIDASQTLEQVTAALRSALNTWLEQQ 209 >gi|148657338|ref|YP_001277543.1| dTMP kinase [Roseiflexus sp. RS-1] gi|166223113|sp|A5UY90|KTHY_ROSS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148569448|gb|ABQ91593.1| thymidylate kinase [Roseiflexus sp. RS-1] Length = 226 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 112/214 (52%), Gaps = 6/214 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG EG+GK+T LL L + + V +TREPGGT + R ++L E Sbjct: 3 LFVTFEGPEGSGKSTQARLLYESLHARRFPVILTREPGGTRIGDLIRRIVLDLQHTEMAP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F+AAR V VIRP L +G I+LCDR+ DS++AYQG L + + Sbjct: 63 TAEMLLFSAARAQLVSEVIRPYLEQGGIVLCDRYADSTFAYQGYGLGRDLAELRVITAAA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLD---YFERKDVMIHEKRRQIFL 178 + PD T LD+ GL+R + R + + A D + +++ H++ + Sbjct: 123 TGGLRPDITFYLDISAAEGLERKRRKGARSTGQRGANNDEWNRLDARELEYHQRVEAGYR 182 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ P+R ++D+ S +++A I IV + Sbjct: 183 ELIAADPERWRVLDARQSIEALAEQIGAIVEPYL 216 >gi|306831966|ref|ZP_07465121.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425892|gb|EFM29009.1| thymidylate kinase [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 211 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 110/214 (51%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T+ D+ +IGL R+ ++ + + + +H++ R+ +L + Sbjct: 121 NDFVTDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVREGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A + R +D++ V + L+ + E + K Sbjct: 177 AEQEK-RIVTIDASRELADVVSETLHTILEQLAK 209 >gi|83719414|ref|YP_442675.1| thymidylate kinase [Burkholderia thailandensis E264] gi|167581613|ref|ZP_02374487.1| thymidylate kinase [Burkholderia thailandensis TXDOH] gi|167619729|ref|ZP_02388360.1| thymidylate kinase [Burkholderia thailandensis Bt4] gi|257138888|ref|ZP_05587150.1| thymidylate kinase [Burkholderia thailandensis E264] gi|123536877|sp|Q2SWM4|KTHY_BURTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|83653239|gb|ABC37302.1| thymidylate kinase [Burkholderia thailandensis E264] Length = 206 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPAGRHVVVTREPGGTRLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+P I R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVPPQIASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A+ P R IVDS+ + + ++ L Sbjct: 172 YLRRAQEAPHRFVIVDSSEPIAQIRKQLEGVLAAL 206 >gi|154249383|ref|YP_001410208.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1] gi|171769338|sp|A7HKW8|KTHY_FERNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|154153319|gb|ABS60551.1| dTMP kinase [Fervidobacterium nodosum Rt17-B1] Length = 197 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 11/208 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+SFEGI+G GK+T ++LL +L+ K REPGGT E R +L+ E A Sbjct: 1 MFVSFEGIDGCGKSTQVNLLVNYLEEKGIPYIKVREPGGTHLGEKIRELLI---TQEMCA 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE+VI+PAL GKI++ DRF SS AYQG + L + + Sbjct: 58 RSELLLFLASRAQLVESVIKPALKNGKIVIADRFAHSSVAYQGCGRELGPETVKILNDFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +D+PV++ ++R++N++ D E++ E R +L +A+ Sbjct: 118 TDKTYPDIVFYIDVPVNVAMERMKNQHK-------DRIEKEGKEFWESIRNCYLKMAKEN 170 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 + I+D + + + I+ + + Sbjct: 171 -ENFVIIDGTRTIEEIHREIVKVFNAYL 197 >gi|302873019|ref|YP_003841652.1| thymidylate kinase [Clostridium cellulovorans 743B] gi|307688812|ref|ZP_07631258.1| thymidylate kinase [Clostridium cellulovorans 743B] gi|302575876|gb|ADL49888.1| thymidylate kinase [Clostridium cellulovorans 743B] Length = 212 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 7/210 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G I+ EG +G+GK+T I LLK++ + Y+V TREPGGT +E R ++L +E Sbjct: 8 NRGYLITIEGPDGSGKSTQIELLKKYFNDRGYEVVTTREPGGTKISEKIRELILDNDNEE 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA+R VE V++PA+ EGKI+LCDRF+ SS YQG + ++ Sbjct: 68 MNGICEALLYAASRAQLVEQVLKPAIYEGKIVLCDRFVHSSLVYQGYARELGVNQVLNIN 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E ++ + D TI++D+P ++G++R + + LD E H K + I Sbjct: 128 EFALNGLKADLTIMIDIPYELGIERKRKQKK------LDRLENGGDEFHNKVFNGYQQIV 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + I+D + + + +I+ + EL Sbjct: 182 KTMKN-VVIIDGTKAVEEIHKDIVKTIAEL 210 >gi|229015433|ref|ZP_04172435.1| Thymidylate kinase [Bacillus cereus AH1273] gi|229021638|ref|ZP_04178225.1| Thymidylate kinase [Bacillus cereus AH1272] gi|228739641|gb|EEL90050.1| Thymidylate kinase [Bacillus cereus AH1272] gi|228745852|gb|EEL95852.1| Thymidylate kinase [Bacillus cereus AH1273] Length = 208 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDIAFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +VD+ + + ++ IV + + Sbjct: 178 RFSDRIVVVDADQPMEKLIEEVIQIVEDKL 207 >gi|194468114|ref|ZP_03074100.1| dTMP kinase [Lactobacillus reuteri 100-23] gi|194452967|gb|EDX41865.1| dTMP kinase [Lactobacillus reuteri 100-23] Length = 213 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 114/209 (54%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ I ++R L+ + V TREPGG +E R VL + Sbjct: 3 GKFISFEGPDGAGKTSVIQQIQRELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDRF+DSS AYQG + + Sbjct: 63 MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ +MP TI LD+ +IGLKR+ S ++ + + + H RQ +L + Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRIAE----HRSNQVNRLDEEKLEFHRTVRQSYLKLY 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +N P+R ++D++ + V ++ + + Sbjct: 179 QNYPERIKLIDASQPLKKVIEDVKATIHD 207 >gi|29377238|ref|NP_816392.1| thymidylate kinase [Enterococcus faecalis V583] gi|227554247|ref|ZP_03984294.1| thymidylate kinase [Enterococcus faecalis HH22] gi|229549121|ref|ZP_04437846.1| thymidylate kinase [Enterococcus faecalis ATCC 29200] gi|255971839|ref|ZP_05422425.1| thymidylate kinase [Enterococcus faecalis T1] gi|255974836|ref|ZP_05425422.1| thymidylate kinase [Enterococcus faecalis T2] gi|256763385|ref|ZP_05503965.1| thymidylate kinase [Enterococcus faecalis T3] gi|256854059|ref|ZP_05559424.1| thymidylate kinase [Enterococcus faecalis T8] gi|256957990|ref|ZP_05562161.1| thymidylate kinase [Enterococcus faecalis DS5] gi|256960991|ref|ZP_05565162.1| thymidylate kinase [Enterococcus faecalis Merz96] gi|256963867|ref|ZP_05568038.1| thymidylate kinase [Enterococcus faecalis HIP11704] gi|257079927|ref|ZP_05574288.1| thymidylate kinase [Enterococcus faecalis JH1] gi|257081675|ref|ZP_05576036.1| thymidylate kinase [Enterococcus faecalis E1Sol] gi|257084272|ref|ZP_05578633.1| thymidylate kinase [Enterococcus faecalis Fly1] gi|257087729|ref|ZP_05582090.1| thymidylate kinase [Enterococcus faecalis D6] gi|257416932|ref|ZP_05593926.1| thymidylate kinase [Enterococcus faecalis AR01/DG] gi|257420151|ref|ZP_05597145.1| thymidylate kinase [Enterococcus faecalis T11] gi|257421627|ref|ZP_05598617.1| thymidylate kinase [Enterococcus faecalis X98] gi|293384623|ref|ZP_06630488.1| dTMP kinase [Enterococcus faecalis R712] gi|293386762|ref|ZP_06631333.1| dTMP kinase [Enterococcus faecalis S613] gi|294779714|ref|ZP_06745102.1| dTMP kinase [Enterococcus faecalis PC1.1] gi|300860317|ref|ZP_07106404.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11] gi|307269207|ref|ZP_07550561.1| thymidylate kinase [Enterococcus faecalis TX4248] gi|307271815|ref|ZP_07553086.1| thymidylate kinase [Enterococcus faecalis TX0855] gi|307277000|ref|ZP_07558110.1| thymidylate kinase [Enterococcus faecalis TX2134] gi|307278693|ref|ZP_07559761.1| thymidylate kinase [Enterococcus faecalis TX0860] gi|307290232|ref|ZP_07570148.1| thymidylate kinase [Enterococcus faecalis TX0411] gi|312900123|ref|ZP_07759439.1| thymidylate kinase [Enterococcus faecalis TX0470] gi|312906447|ref|ZP_07765455.1| thymidylate kinase [Enterococcus faecalis DAPTO 512] gi|312951938|ref|ZP_07770826.1| thymidylate kinase [Enterococcus faecalis TX0102] gi|312979395|ref|ZP_07791083.1| thymidylate kinase [Enterococcus faecalis DAPTO 516] gi|46576515|sp|Q830L6|KTHY_ENTFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|29344704|gb|AAO82462.1| thymidylate kinase [Enterococcus faecalis V583] gi|227176607|gb|EEI57579.1| thymidylate kinase [Enterococcus faecalis HH22] gi|229305746|gb|EEN71742.1| thymidylate kinase [Enterococcus faecalis ATCC 29200] gi|255962857|gb|EET95333.1| thymidylate kinase [Enterococcus faecalis T1] gi|255967708|gb|EET98330.1| thymidylate kinase [Enterococcus faecalis T2] gi|256684636|gb|EEU24331.1| thymidylate kinase [Enterococcus faecalis T3] gi|256711002|gb|EEU26045.1| thymidylate kinase [Enterococcus faecalis T8] gi|256948486|gb|EEU65118.1| thymidylate kinase [Enterococcus faecalis DS5] gi|256951487|gb|EEU68119.1| thymidylate kinase [Enterococcus faecalis Merz96] gi|256954363|gb|EEU70995.1| thymidylate kinase [Enterococcus faecalis HIP11704] gi|256987957|gb|EEU75259.1| thymidylate kinase [Enterococcus faecalis JH1] gi|256989705|gb|EEU77007.1| thymidylate kinase [Enterococcus faecalis E1Sol] gi|256992302|gb|EEU79604.1| thymidylate kinase [Enterococcus faecalis Fly1] gi|256995759|gb|EEU83061.1| thymidylate kinase [Enterococcus faecalis D6] gi|257158760|gb|EEU88720.1| thymidylate kinase [Enterococcus faecalis ARO1/DG] gi|257161979|gb|EEU91939.1| thymidylate kinase [Enterococcus faecalis T11] gi|257163451|gb|EEU93411.1| thymidylate kinase [Enterococcus faecalis X98] gi|291078081|gb|EFE15445.1| dTMP kinase [Enterococcus faecalis R712] gi|291083765|gb|EFE20728.1| dTMP kinase [Enterococcus faecalis S613] gi|294453205|gb|EFG21619.1| dTMP kinase [Enterococcus faecalis PC1.1] gi|300849356|gb|EFK77106.1| dTMP kinase [Enterococcus faecalis TUSoD Ef11] gi|306498653|gb|EFM68154.1| thymidylate kinase [Enterococcus faecalis TX0411] gi|306504633|gb|EFM73835.1| thymidylate kinase [Enterococcus faecalis TX0860] gi|306506423|gb|EFM75583.1| thymidylate kinase [Enterococcus faecalis TX2134] gi|306511693|gb|EFM80692.1| thymidylate kinase [Enterococcus faecalis TX0855] gi|306514426|gb|EFM82987.1| thymidylate kinase [Enterococcus faecalis TX4248] gi|310627601|gb|EFQ10884.1| thymidylate kinase [Enterococcus faecalis DAPTO 512] gi|310630127|gb|EFQ13410.1| thymidylate kinase [Enterococcus faecalis TX0102] gi|311287766|gb|EFQ66322.1| thymidylate kinase [Enterococcus faecalis DAPTO 516] gi|311292758|gb|EFQ71314.1| thymidylate kinase [Enterococcus faecalis TX0470] gi|315025470|gb|EFT37402.1| thymidylate kinase [Enterococcus faecalis TX2137] gi|315030416|gb|EFT42348.1| thymidylate kinase [Enterococcus faecalis TX4000] gi|315035135|gb|EFT47067.1| thymidylate kinase [Enterococcus faecalis TX0027] gi|315148725|gb|EFT92741.1| thymidylate kinase [Enterococcus faecalis TX4244] gi|315151798|gb|EFT95814.1| thymidylate kinase [Enterococcus faecalis TX0012] gi|315154273|gb|EFT98289.1| thymidylate kinase [Enterococcus faecalis TX0031] gi|315155624|gb|EFT99640.1| thymidylate kinase [Enterococcus faecalis TX0043] gi|315159635|gb|EFU03652.1| thymidylate kinase [Enterococcus faecalis TX0312] gi|315168745|gb|EFU12762.1| thymidylate kinase [Enterococcus faecalis TX1341] gi|315170439|gb|EFU14456.1| thymidylate kinase [Enterococcus faecalis TX1342] gi|315173504|gb|EFU17521.1| thymidylate kinase [Enterococcus faecalis TX1346] gi|315573802|gb|EFU85993.1| thymidylate kinase [Enterococcus faecalis TX0309B] gi|315580314|gb|EFU92505.1| thymidylate kinase [Enterococcus faecalis TX0309A] gi|323481685|gb|ADX81124.1| thymidylate kinase [Enterococcus faecalis 62] gi|327535978|gb|AEA94812.1| thymidylate kinase [Enterococcus faecalis OG1RF] gi|329572901|gb|EGG54522.1| dTMP kinase [Enterococcus faecalis TX1467] Length = 212 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG +GAGKT+ + + L + + TREPGG P AE R V+L D Sbjct: 2 QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 62 MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q + +D + + + H++ R +L +A Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|254247997|ref|ZP_04941318.1| Thymidylate kinase [Burkholderia cenocepacia PC184] gi|124872773|gb|EAY64489.1| Thymidylate kinase [Burkholderia cenocepacia PC184] Length = 206 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVLAAL 206 >gi|241761931|ref|ZP_04760016.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373611|gb|EER63183.1| dTMP kinase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 216 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 5/201 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FIS EG EG GK+T I LL L+ K V TREPGG +A RH+LL + + Sbjct: 10 GYFISLEGGEGVGKSTQIRLLVAALEEKLQKSVIATREPGGCSGGDAIRHLLLEGDLHRW 69 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++FAAAR +HV VI+PAL EGK ++CDRF+DSS AYQG+ + L Sbjct: 70 TNATEALLFAAARAEHVARVIKPALKEGKWVVCDRFIDSSLAYQGDTGGLTQEDIRCLHR 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I Q ++PD T +L LP G++R Q R + + FE++ + H+K FL +A Sbjct: 130 IGSQGILPDRTFLLTLPEGEGIRRAQER----DKNKGNRFEQRTIDYHKKVNDSFLQLAA 185 Query: 183 NQPDRCHIVDSAHSFQSVATN 203 +P+R ++D++ + + V + Sbjct: 186 KEPERFRVIDASGNPEEVHRH 206 >gi|152964459|ref|YP_001360243.1| dTMP kinase [Kineococcus radiotolerans SRS30216] gi|151358976|gb|ABS01979.1| dTMP kinase [Kineococcus radiotolerans SRS30216] Length = 662 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 8/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVD 60 G F++ EG +G+GKTT +LL +L+ + ++V VTREPGGT R VLL+ Sbjct: 446 GGCFVALEGGDGSGKTTQATLLAEWLRERGHEVVVTREPGGTATGRELREVLLNHRGEEQ 505 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA++FAA R HV V+RP L G ++L DR++DSS AYQG +++L Sbjct: 506 PLSPRAEALLFAADRAQHVAEVVRPGLDRGAVVLTDRYVDSSLAYQGAGRDLPAAEVETL 565 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q ++PD T++LD+ A D E + H + R+ FL + Sbjct: 566 STWATQGLLPDLTVVLDVDPAT------AARRRAGRAADDRMEAESQAFHARVREQFLLL 619 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P R ++D++ S + V + + + Sbjct: 620 AARDPARYLVLDASTSPEVVQQRLREHLAPRL 651 >gi|107028928|ref|YP_626023.1| thymidylate kinase [Burkholderia cenocepacia AU 1054] gi|116689914|ref|YP_835537.1| thymidylate kinase [Burkholderia cenocepacia HI2424] gi|170733252|ref|YP_001765199.1| thymidylate kinase [Burkholderia cenocepacia MC0-3] gi|123070937|sp|Q1BH55|KTHY_BURCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221725|sp|A0K817|KTHY_BURCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487584|sp|B1JTS0|KTHY_BURCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|105898092|gb|ABF81050.1| thymidylate kinase [Burkholderia cenocepacia AU 1054] gi|116648003|gb|ABK08644.1| thymidylate kinase [Burkholderia cenocepacia HI2424] gi|169816494|gb|ACA91077.1| dTMP kinase [Burkholderia cenocepacia MC0-3] Length = 206 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R R ++R D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASER---RGAVR---MPDKFESESDAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVLAAL 206 >gi|256616735|ref|ZP_05473581.1| thymidylate kinase [Enterococcus faecalis ATCC 4200] gi|256596262|gb|EEU15438.1| thymidylate kinase [Enterococcus faecalis ATCC 4200] gi|315032614|gb|EFT44546.1| thymidylate kinase [Enterococcus faecalis TX0017] gi|315143843|gb|EFT87859.1| thymidylate kinase [Enterococcus faecalis TX2141] Length = 212 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG +GAGKT+ + + L + + TREPGG P AE R V+L D Sbjct: 2 QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 62 MDERTEALLYAAARRQHLVEKIFPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q + +D + + + H++ R +L +A Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|220926669|ref|YP_002501971.1| thymidylate kinase [Methylobacterium nodulans ORS 2060] gi|219951276|gb|ACL61668.1| thymidylate kinase [Methylobacterium nodulans ORS 2060] Length = 225 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 3/188 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+ EG EGAGK+T I+ L L+ + +V TREPGG+P AE R LL+ + G Sbjct: 8 GVFITVEGGEGAGKSTQIARLAERLRAGDREVITTREPGGSPRAEQIRTALLAGAAKDHG 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++F+AARLDH+ +IRPAL G ++LCDRF DS+ AYQG + +L+ + Sbjct: 68 PFAEALLFSAARLDHLNTLIRPALARGAVVLCDRFADSTRAYQGAAGGIDPQEVAALERV 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V PD T+ILDLP ++GL R + R S S D FE + + H++ R+ F IA Sbjct: 128 VVGPTRPDLTLILDLPPELGLARARRRAS---SPGPDRFEAETLSFHQRLREAFRAIAAQ 184 Query: 184 QPDRCHIV 191 +P+RC ++ Sbjct: 185 EPERCVLI 192 >gi|94310766|ref|YP_583976.1| thymidylate kinase [Cupriavidus metallidurans CH34] gi|254808302|sp|Q1LMB9|KTHY_RALME RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|93354618|gb|ABF08707.1| thymidylate kinase (dTMP kinase) [Cupriavidus metallidurans CH34] Length = 200 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+GAGK+THI + L+ + +V TREPGGTP E R +LL + Sbjct: 2 RGKFITFEGIDGAGKSTHIEWVAERLRAR-ANVVTTREPGGTPLGEDLRQLLLH---RKM 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG L +L++ Sbjct: 58 HLETEALLMFAARREHIAEVIEPALARGDWVISDRFTDATFAYQGGGRGLALDRLATLEQ 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++ D+P++ R+ + D FE + E+ R +L A Sbjct: 118 WVQSGLQPDLTLLFDVPLETASARLAG------AREPDKFEAESRAFFERTRTEYLRRAA 171 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P R ++D+ S + + I+ L Sbjct: 172 EAPQRFRVIDATRSIDEIRVALEEIIATL 200 >gi|307288618|ref|ZP_07568599.1| thymidylate kinase [Enterococcus faecalis TX0109] gi|306500372|gb|EFM69708.1| thymidylate kinase [Enterococcus faecalis TX0109] gi|315165331|gb|EFU09348.1| thymidylate kinase [Enterococcus faecalis TX1302] Length = 212 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 108/209 (51%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG +GAGKT+ + + L + + TREPGG P AE R V+L D Sbjct: 2 QGIFITFEGPDGAGKTSVLKEVAERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL G ++LCDRF DSS AYQG + S+ Sbjct: 62 MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFADSSLAYQGAGRRIGIAPIASIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q + +D + + + H++ R +L +A Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|12722080|gb|AAK03757.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 243 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 8/216 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EGIEGAGKTT + R L +D+ TREPGGTP AE R ++ Sbjct: 35 MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 94 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L + Sbjct: 95 EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHLLHT 154 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L++ + E PD T+ LD+ +GL R + R LD E++++ + RQ + + Sbjct: 155 LKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQE 208 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R+ P + +D++ + VA ++ + + + R Sbjct: 209 LVRHNP-KAVTIDASQTMSKVAEDVESAIETWLTTR 243 >gi|84516820|ref|ZP_01004178.1| thymidylate kinase [Loktanella vestfoldensis SKA53] gi|84509288|gb|EAQ05747.1| thymidylate kinase [Loktanella vestfoldensis SKA53] Length = 202 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 112/208 (53%), Gaps = 6/208 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+FEGI+G+GK+T L ++L + +DV +TREPGG+ AE R +LL+ D Sbjct: 1 MTRPRFITFEGIDGSGKSTQARRLAQWLGDQGHDVILTREPGGSQGAEEIRQLLLTGDTD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E I PAL GK ++ DRF DS+ YQG +D+L Sbjct: 61 RWSAETEILLFTAARRDHLEKTILPALAAGKTVVSDRFADSTRVYQGATRGDLRAKVDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T ++D+ L+R R S D FE + E R FL + Sbjct: 121 HALMI-GREPDLTFVIDMDPATALERGLARRS-----GEDRFEDFGLPFQETLRHGFLAL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 AR + RC ++D + +A+++ + Sbjct: 175 ARAEAQRCVLIDGNRTPDQIASDVAAHL 202 >gi|257091001|ref|ZP_05585362.1| thymidylate kinase [Enterococcus faecalis CH188] gi|312902587|ref|ZP_07761793.1| thymidylate kinase [Enterococcus faecalis TX0635] gi|256999813|gb|EEU86333.1| thymidylate kinase [Enterococcus faecalis CH188] gi|310634257|gb|EFQ17540.1| thymidylate kinase [Enterococcus faecalis TX0635] gi|315162072|gb|EFU06089.1| thymidylate kinase [Enterococcus faecalis TX0645] gi|315579603|gb|EFU91794.1| thymidylate kinase [Enterococcus faecalis TX0630] Length = 212 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG +GAGKT+ + + L + + TREPGG P AE R V+L D Sbjct: 2 QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + + S+ Sbjct: 62 MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIVPIASIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q + +D + + + H++ R +L +A Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAIIE 206 >gi|294340171|emb|CAZ88543.1| putative thymidylate kinase [Thiomonas sp. 3As] Length = 215 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 9/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFIS EGI+GAGK+T + + L+ N V +TREPGGT E R +LL + Sbjct: 8 RPGLFISLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLH---ET 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++ AAR +HV VI PAL+ G ++CDRF ++ AYQG L++L Sbjct: 65 MRPATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALA 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PDC I++D+P ++ +R++ + D FE++ V + R +L A Sbjct: 125 RWVHPGLCPDCIILIDVPPEVAAQRLEQ------TRQRDRFEQESVDFFARVRANYLQQA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P++ ++D + ++V I + +++Q+ Sbjct: 179 ASSPEKWRVIDGTQTPEAVQKTITGYLNKVLQE 211 >gi|75675656|ref|YP_318077.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255] gi|123613520|sp|Q3SSL6|KTHY_NITWN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|74420526|gb|ABA04725.1| thymidylate kinase [Nitrobacter winogradskyi Nb-255] Length = 230 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 84/190 (44%), Positives = 120/190 (63%), Gaps = 3/190 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEG EG+GK+T I +L LQ VTREPGG+P AE RH++LS Sbjct: 11 QRGRFITFEGGEGSGKSTQIRILAERLQAAKLRAIVTREPGGSPGAEIIRHLVLSGVGKL 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 GA+AE ++FAAAR DHV VI+PAL +G +LCDRF DS+ YQG+ + L++++ Sbjct: 71 LGADAETLLFAAARDDHVHTVIKPALEQGIWVLCDRFADSTRVYQGQLGNVLPGVLNAME 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ ++ PD T+ILD+PV++GL+R R R S D FE +D+ H K R + IA Sbjct: 131 RVTIGDLKPDLTVILDVPVEVGLQRAAAR---RGSGAPDRFEAEDIAFHRKLRDAYRAIA 187 Query: 182 RNQPDRCHIV 191 + P RC ++ Sbjct: 188 ASDPQRCVVI 197 >gi|257867902|ref|ZP_05647555.1| thymidylate kinase [Enterococcus casseliflavus EC30] gi|257874231|ref|ZP_05653884.1| thymidylate kinase [Enterococcus casseliflavus EC10] gi|257876795|ref|ZP_05656448.1| thymidylate kinase [Enterococcus casseliflavus EC20] gi|257801985|gb|EEV30888.1| thymidylate kinase [Enterococcus casseliflavus EC30] gi|257808395|gb|EEV37217.1| thymidylate kinase [Enterococcus casseliflavus EC10] gi|257810961|gb|EEV39781.1| thymidylate kinase [Enterococcus casseliflavus EC20] Length = 215 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ I L LQ + TREPGG AE R ++L +E Sbjct: 2 NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G I++CDRF+DSS AYQG + + Sbjct: 62 MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R+Q + D + + + H++ R +L +A Sbjct: 122 EFATEGTTPDFTLYLDVDSDTGLRRIQEN----RAHQYDRLDSEGLEFHQRVRHAYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R H +D+ Q V + + + E Sbjct: 178 EENPVRIHKIDARMGLQEVVESSYSAIVE 206 >gi|169632744|ref|YP_001706480.1| thymidylate kinase [Acinetobacter baumannii SDF] gi|184159124|ref|YP_001847463.1| thymidylate kinase [Acinetobacter baumannii ACICU] gi|260556574|ref|ZP_05828792.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606] gi|294841418|ref|ZP_06786101.1| thymidylate kinase [Acinetobacter sp. 6014059] gi|229487548|sp|B2HWQ7|KTHY_ACIBC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229487549|sp|B0VTL6|KTHY_ACIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169151536|emb|CAP00303.1| thymidylate kinase [Acinetobacter baumannii] gi|183210718|gb|ACC58116.1| Thymidylate kinase [Acinetobacter baumannii ACICU] gi|260409833|gb|EEX03133.1| thymidylate kinase [Acinetobacter baumannii ATCC 19606] gi|322509038|gb|ADX04492.1| tmk [Acinetobacter baumannii 1656-2] gi|323519020|gb|ADX93401.1| thymidylate kinase [Acinetobacter baumannii TCDC-AB0715] Length = 199 Score = 245 bits (627), Expect = 3e-63, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S V L + Sbjct: 174 EPERIKRLDATQSPDQVFEQALQYL 198 >gi|118602262|ref|YP_903477.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166223114|sp|A1AVP9|KTHY_RUTMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118567201|gb|ABL02006.1| thymidylate kinase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 205 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ +G+EG+GK+T I + +L K +V +TREPGGT E R +LLS + Sbjct: 1 MQRGKFITIDGVEGSGKSTQIDFICDYLVTKKINVILTREPGGTELGEKIRTLLLSTDIQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ AAR +H+ I P+L +G +L DRF D+SYAYQG + L Sbjct: 61 SIHGDTELLLLFAARNEHIRTKIIPSLEKGDWVLSDRFTDASYAYQGGGRGLSIERITQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +Q+ PD T++LD+ V +G+ RV++R D E + ++ R +++ Sbjct: 121 EKWVLQDFTPDVTLLLDVSVALGMSRVESR------GRKDRIELETNDFFKRVRNSYIER 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ P R ++D++ + + A I I+ +++ Sbjct: 175 SKQFPKRIKLIDASKTLEQTAQQI-KIILQVL 205 >gi|206560328|ref|YP_002231092.1| thymidylate kinase [Burkholderia cenocepacia J2315] gi|229487614|sp|B4EBJ2|KTHY_BURCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|198036369|emb|CAR52265.1| putative thymidylate kinase [Burkholderia cenocepacia J2315] Length = 206 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ L+ L V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLAWFCERLQGRLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFSRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ S + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATRSIPEIRQQLERVLAAL 206 >gi|73748588|ref|YP_307827.1| thymidylate kinase [Dehalococcoides sp. CBDB1] gi|289432614|ref|YP_003462487.1| thymidylate kinase [Dehalococcoides sp. GT] gi|123619641|sp|Q3ZXD8|KTHY_DEHSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73660304|emb|CAI82911.1| thymidylate kinase [Dehalococcoides sp. CBDB1] gi|288946334|gb|ADC74031.1| thymidylate kinase [Dehalococcoides sp. GT] Length = 208 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 105/208 (50%), Gaps = 7/208 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++ +T EPGG+ + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A+R ++NVI+PAL +GKI++CDR+ DS+ AYQG + + ++ Sbjct: 63 LTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQGYGRGLDLDTVKCVNSLA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD TI LD+ L R + D FE ++ H++ R F I + Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGELPPDRFESENNGFHQRVRNGFGAIYATE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR +D++ + + I V L+ Sbjct: 176 PDRFLKLDASLPQSEIFSRIKQRVTILL 203 >gi|83949598|ref|ZP_00958331.1| thymidylate kinase [Roseovarius nubinhibens ISM] gi|83837497|gb|EAP76793.1| thymidylate kinase [Roseovarius nubinhibens ISM] Length = 210 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 79/211 (37%), Positives = 118/211 (55%), Gaps = 6/211 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+FISFEGI+G+GK+T + L LQ + V +TREPGG+P AE R ++L D Sbjct: 5 RAGVFISFEGIDGSGKSTQVRRLADHLQARGLRVRLTREPGGSPGAEDIRKLVLEGAGDR 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E E ++F AAR DH+E VI PAL G++++CDRF DS+ YQG + +D L Sbjct: 65 WSPETEILLFTAARRDHMERVILPALAAGEVVICDRFADSTRMYQGLASAEMRALVDQLH 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD T+++D+ ++GL R R E FE + + + R FLD+A Sbjct: 125 DLMIGR-EPDLTLLIDMDPEVGLARALARQGGEE-----RFEGRGIEWQRRMRAGFLDLA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR +VD A +VA I + + Sbjct: 179 EAHPDRIRVVDGAGEIDAVAGQIATLTDAAL 209 >gi|309810854|ref|ZP_07704655.1| dTMP kinase [Dermacoccus sp. Ellin185] gi|308435160|gb|EFP58991.1| dTMP kinase [Dermacoccus sp. Ellin185] Length = 268 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 8/210 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++FEG +GAGKTT I +L+ +V +TREPGGTP R +LL D+ Sbjct: 56 GLFVTFEGGDGAGKTTQIERAAAWLRELGREVVITREPGGTPLGVEIRRLLLHG--DDVA 113 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AEA+++AA R HVE ++RPAL G ++L DR++DSS AYQG + ++S+ Sbjct: 114 SRAEALLYAADRAHHVETLVRPALARGAVVLQDRYIDSSIAYQGAGRALAADDVESISRW 173 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + PD T+++D+ ++ +R R D ER+ H + R+ FL +A Sbjct: 174 ATRGLTPDVTVLIDVSPEVARERRGAR------GAEDRLEREADDFHTRVREHFLRLAAR 227 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R ++D+ S + + + +L++ Sbjct: 228 DEARYLVLDAGRSRDDLTAAVRTRLEQLLE 257 >gi|113461628|ref|YP_719697.1| thymidylate kinase [Haemophilus somnus 129PT] gi|123031486|sp|Q0I5J0|KTHY_HAES1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|112823671|gb|ABI25760.1| thymidylate kinase [Haemophilus somnus 129PT] Length = 210 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 119/217 (54%), Gaps = 8/217 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EG+EGAGK++ ++ L+ ++V TREPGGTP AE R+++ Sbjct: 1 MKTGKFIVIEGLEGAGKSSTHQVVVNTLKEFGIHEVVFTREPGGTPLAEKLRYLIKHEVE 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG + + Sbjct: 61 ELVTAKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDLSSQAYQGGGRGLDQHLMTT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ + + PD T+ LD+ +IGL RV+ R LD E++++ + R +L Sbjct: 121 LKNAVLGDFKPDFTLYLDIEPEIGLARVRGR------GELDRIEQQNLDFFHRTRARYLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + + P+ ++++ + V +I V + +++ V Sbjct: 175 LVQQDPN-AVLINADQPIELVQQDIRKAVQKFIEENV 210 >gi|224541623|ref|ZP_03682162.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM 15897] gi|224525461|gb|EEF94566.1| hypothetical protein CATMIT_00794 [Catenibacterium mitsuokai DSM 15897] Length = 211 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 6/208 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG+GKTT +L + + Y++ +REPGG AE R V+ + A Sbjct: 10 LFITFEGGEGSGKTTIAKMLHKQFIEEGYNITFSREPGGVDIAEQIRDVITDVNNTKMDA 69 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R H+ + P L E I++CDRF+DSS YQG + ++ + Sbjct: 70 RTEALLYAASRRQHLVEKVLPVLKEDGIVICDRFIDSSLVYQGIGRGIGVDNIYNMNLFA 129 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD TI D+ ++ LKR+ ++ + + + H K + + I Sbjct: 130 TDGILPDLTIFFDVKPEVALKRITG------DREVNRLDLESLDFHHKVYEGYQMICDKF 183 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR VD++ + V + IV + + Sbjct: 184 PDRIVKVDASLPVEEVYRQVYEIVKDRL 211 >gi|284028576|ref|YP_003378507.1| thymidylate kinase [Kribbella flavida DSM 17836] gi|283807869|gb|ADB29708.1| thymidylate kinase [Kribbella flavida DSM 17836] Length = 661 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 119/213 (55%), Gaps = 9/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+FEG EGAGK+T +LL ++L+ + V +TREPG T + R ++L + Sbjct: 456 TTGLFIAFEGGEGAGKSTQSALLVKWLEERGQHVLLTREPGATDLGKTLRQIVLDPATGD 515 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA + +HV++VI+PAL G +++ DR++DS+ AYQG ++ + Sbjct: 516 ISHRAEALIYAADKAEHVDSVIKPALKAGTVVITDRYVDSALAYQGSGRDLDLADVERVN 575 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ P+ TI+LDLP GL R + R D E + HE+ R FL++A Sbjct: 576 RWATDDLRPNLTILLDLPPKSGLGRFEER---------DRIEAQSADFHERVRAAFLELA 626 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P ++D+ + +A I + ++ K Sbjct: 627 AAEPQHYLVLDATQDREQLAAQIQARLLPMLPK 659 >gi|226952159|ref|ZP_03822623.1| thymidylate kinase [Acinetobacter sp. ATCC 27244] gi|226837095|gb|EEH69478.1| thymidylate kinase [Acinetobacter sp. ATCC 27244] Length = 201 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ +++ +V +TREPGGTP AE R +LL+ +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GKI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALEAGKIVLSDRFTDASFAYQCSGRGLSQEKLQLLNQT 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MP+ T LD P+++G+ R + R LD FE++ + K R + + + Sbjct: 121 FV-AKMPNITFWLDAPIELGMTRARER------GALDRFEQEKLSFFAKVRAGYETLWQA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P+R +++ + V LN + +L Sbjct: 174 EPERIKRLNATQNADLVFEEALNYIKQL 201 >gi|163789941|ref|ZP_02184377.1| thymidylate kinase [Carnobacterium sp. AT7] gi|159874881|gb|EDP68949.1| thymidylate kinase [Carnobacterium sp. AT7] Length = 211 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+ EG +GAGKT+ I L L + ++ TREPGG+ AE R ++L+ E Sbjct: 2 RGIFITIEGPDGAGKTSVIKKLIPMLVETIQQEIVATREPGGSRIAEEIRELILNPENIE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R H+ I PAL GK+++CDRF+DSS AYQG + + Sbjct: 62 MDIRTEALLYAAGRRQHLVEKIIPALETGKVVICDRFVDSSLAYQGVARGIGISEVAEIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ +GL+R+ R D +++ + HEK R +L IA Sbjct: 122 QFATDNLSPDLTLYLDIEAHLGLERINQNKDNR---QFDRLDQETLEFHEKVRSAYLAIA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + Q +R +D++ + V + + + ++ Sbjct: 179 KEQSERIVQIDASQELEKVVADCYETIIKRIR 210 >gi|255320788|ref|ZP_05361963.1| thymidylate kinase [Acinetobacter radioresistens SK82] gi|255302165|gb|EET81407.1| thymidylate kinase [Acinetobacter radioresistens SK82] Length = 202 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 8/208 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++K ++ +TREPGGTP AE R +LLS DE Sbjct: 1 MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTPLAEQIRALLLSVSHDEKMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GK +LCDRF D+S+AYQ L L + Sbjct: 61 DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLAVLNQS 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T+ LD PV++G+ R + R LD FE++ V EK R + + + Sbjct: 121 FV-SRMPDITLWLDAPVELGMSRARER------GALDRFEQEKVSFFEKVRAGYTRLWQQ 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R +D+ + + V L + +L Sbjct: 174 HPERIKRLDATQAPEKVLEQALEQIGKL 201 >gi|327438112|dbj|BAK14477.1| thymidylate kinase [Solibacillus silvestris StLB046] Length = 209 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI+FEG EGAGKT+ + + L+ + + +TREPGG AE R ++L Sbjct: 1 MQRNLFITFEGGEGAGKTSVLKAIGERLKEERIEALLTREPGGIEIAEKIRTIILDPAHT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AAAR H I PAL EGK +LCDRF+DSS AYQG + S+ Sbjct: 61 EMHERTEALLYAAARAQHFYEKIVPALEEGKHVLCDRFIDSSLAYQGYAREIGVDDVLSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ + +PD TI ++ + GL R+ S ++ + + + H+K + + + Sbjct: 121 NEFAIGKRLPDVTIFFNIAPERGLARIHA----TRSDEINRLDAEGLAFHQKVYEGYEEA 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R P+R +V++ + + V + I+ L+ Sbjct: 177 IRRYPERFKMVNADQALEQVIEEVWGILNPLL 208 >gi|1074411|pir||A64153 dTMP kinase (EC 2.7.4.9) - Haemophilus influenzae (strain Rd KW20) Length = 237 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 29 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 88 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 89 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 148 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 149 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 202 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 203 KDNP-KAVVINAEQSIELVQADIESAVKNW 231 >gi|323706279|ref|ZP_08117845.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11] gi|323534331|gb|EGB24116.1| thymidylate kinase [Thermoanaerobacterium xylanolyticum LX-11] Length = 205 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 120/212 (56%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+FEGI+G+GKTT I+LLK++L D+ V REPGGT E R +LL + Sbjct: 1 MYKGKLITFEGIDGSGKTTQINLLKKYLLEIGRDIVVLREPGGTAIGEKIREILLDKKNN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++AA+R + V+ VI P+L +GKI++ DRF+DSS YQG ++ + Sbjct: 61 -IVPSAEALLYAASRAELVKEVIIPSLNDGKIVILDRFVDSSIVYQGYARGLGVEVVEEI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I++ ++PD T+ LD+ L R+ R D E +D HEK + ++ + Sbjct: 120 NSIAIDGLVPDLTVYLDIKPKDTLMRIDRRKDK------DRLEIEDAEFHEKVYEGYMKL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++P R IVD+ H + I++ V +++ Sbjct: 174 IKSKPGRYFIVDATHDIYYIQKVIIDEVSKII 205 >gi|227519453|ref|ZP_03949502.1| thymidylate kinase [Enterococcus faecalis TX0104] gi|227073065|gb|EEI11028.1| thymidylate kinase [Enterococcus faecalis TX0104] Length = 212 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 108/207 (52%), Gaps = 5/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG +GAGKT+ + + L + + TREPGG P AE R V+L D Sbjct: 2 QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 62 MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q + +D + + + H++ R +L +A Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P R +D+ S + V + Sbjct: 178 EENPQRIKKIDARMSLELVVEATYQAI 204 >gi|78066662|ref|YP_369431.1| thymidylate kinase [Burkholderia sp. 383] gi|123568272|sp|Q39FH9|KTHY_BURS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77967407|gb|ABB08787.1| thymidylate kinase [Burkholderia sp. 383] Length = 206 Score = 245 bits (626), Expect = 4e-63, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLS 56 M SG FI+FEGI+GAGKTTH+ LQ V VTREPGGT E R +LL+ Sbjct: 1 MASGKFITFEGIDGAGKTTHLQWFCERLQGKLAAAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R + D FE + + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFSRTRSE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVD+ + + + ++ L Sbjct: 172 YLRRAEEAPHRFAIVDATQTIPEIRHQLERVLAAL 206 >gi|113867580|ref|YP_726069.1| thymidylate kinase [Ralstonia eutropha H16] gi|122946913|sp|Q0KBC0|KTHY_RALEH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|113526356|emb|CAJ92701.1| thymidylate kinase (dTMP kinase) [Ralstonia eutropha H16] Length = 203 Score = 244 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 11/208 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 G FI+FEGI+GAGK+THI + L+ + V TREPGGT E R +LL Sbjct: 2 RGKFITFEGIDGAGKSTHIDWVADRLRARSDIAGVVTTREPGGTSLGEDLRQILLH---R 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ AAR +H+ VI PAL GK ++ DRF D+++AYQG L+ L Sbjct: 59 KMHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++ D+P++ +R+ + D FE + ++ R +L Sbjct: 119 EDWVQGGLQPDLTLLFDVPLETASERLAG------ARAPDRFESESRAFFQRTRDEYLRR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R ++D+ S + + I+ Sbjct: 173 AAQSPQRFRVIDATRSIADIRDELEKII 200 >gi|295099397|emb|CBK88486.1| thymidylate kinase [Eubacterium cylindroides T2-87] Length = 210 Score = 244 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+F++FEG +G+GKTT + L++ YDV TREPGG+ AE+ R++LL Sbjct: 1 MKQGVFLTFEGNDGSGKTTVCKAICEELKKLGYDVVYTREPGGSKIAESIRNILLDVENT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA+++AA+R H+++ + PAL I+LCDRF+DSS AYQG + + Sbjct: 61 GMDPRTEALLYAASRRQHLKDRVLPALKNKSIVLCDRFVDSSLAYQGYARDLGMQEVYDI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ MP T L + ++ G KR+ R + + + H+K R+ + + Sbjct: 121 NQFAIDGCMPIKTFFLSVSIETGQKRMDLRGDK------NRLDLEQSDFHKKVREGYAKL 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D+ + V N LN V +++ + Sbjct: 175 IEMYPERICVIDAEPELKVVVKNTLNEVMKVIHE 208 >gi|270308091|ref|YP_003330149.1| thymidylate kinase [Dehalococcoides sp. VS] gi|270153983|gb|ACZ61821.1| thymidylate kinase [Dehalococcoides sp. VS] Length = 207 Score = 244 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 7/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++ + +T EPGGT + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKLGLECVLTHEPGGTRSGDKITRLLKWSKEENISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A+R ++NVI+PAL +G I++CDR+ DS+ AYQG + + + ++ Sbjct: 63 LTELLLFNASRSILIDNVIKPALQDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD TI LD+ L R + D FE ++ H++ R F IA + Sbjct: 123 NGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +D++ +A I V L++ Sbjct: 176 PNRFLKLDASLPQSELARCIRQRVNVLLK 204 >gi|239994633|ref|ZP_04715157.1| thymidylate kinase [Alteromonas macleodii ATCC 27126] Length = 216 Score = 244 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK++ I L+ + L+ V TREPGGTP AEA R + + Sbjct: 2 RGKFIVVEGLEGAGKSSVIGLIVQALKGAGKRVEQTREPGGTPMAEAIRECVKHDWDETV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR+ + N I P+L G ++ DR SS AYQG + ++ + Sbjct: 62 SEETELLLMYAARVQLLTNKILPSLDAGAWVVGDRHDLSSQAYQGGGRGVSGKTMSAISD 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+++ PD T+ LD+ +GL+R + R LD E+ + E+ R +L +A+ Sbjct: 122 IALKGFKPDLTLYLDVEPAVGLERARGR------GELDRIEQAGLAFFERTRAKYLSLAK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +V + + V +++ I+ + V Sbjct: 176 QD-ESIVVVSAMQPMEKVHQDVIAIINDYV 204 >gi|134094620|ref|YP_001099695.1| thymidylate kinase [Herminiimonas arsenicoxydans] gi|166221746|sp|A4G4Y1|KTHY_HERAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|133738523|emb|CAL61568.1| thymidylate kinase (dTMP kinase) [Herminiimonas arsenicoxydans] Length = 204 Score = 244 bits (625), Expect = 4e-63, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 112/211 (53%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+FEGI+GAGK+TH+S + L+ +V VTREPGGT EA R +LL + Sbjct: 1 MTKAKFITFEGIDGAGKSTHLSFVADLLRASKKNVVVTREPGGTSLGEALRTILLH---E 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ AAR +H+ +I PAL G ++ DRF D+++AYQG L L Sbjct: 58 KMHLETEALLMFAARREHIAQLIEPALARGDWVISDRFTDATFAYQGGGRKLDRQKLSVL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PD T++ D+P+D+ R+ + LD FE++ R +L Sbjct: 118 EQWVHPHLQPDLTLLFDVPLDVARARLDA------TRTLDKFEQEQADFFAATRAEYLRR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R I+DS + ++ + +I+ L Sbjct: 172 AAEFPQRFRIIDSTQAIATIQEQLRDIIAGL 202 >gi|187923929|ref|YP_001895571.1| thymidylate kinase [Burkholderia phytofirmans PsJN] gi|229470188|sp|B2T436|KTHY_BURPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187715123|gb|ACD16347.1| dTMP kinase [Burkholderia phytofirmans PsJN] Length = 206 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 13/212 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+S + L++K V +TREPGGTP E R ++L Sbjct: 1 MARGKFITFEGIDGAGKTTHLSWFRERLEQKVASTGRSVVMTREPGGTPLGEQIREIVLH 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E EA++ A R H+ VI PAL G +L DRF D+++AYQG Sbjct: 61 Q---KMDLETEALLMFALRRQHLAEVIEPALARGDWVLSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ DL +I +R + D FE + V + R Sbjct: 118 LETLERWVQGGFQPDLTVLFDLAPEIANERRSA------ARDPDRFESESVAFFNRTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L A P R I+DSA S + + ++ Sbjct: 172 YLRRAEEAPYRFAIIDSAQSIVQIQRKLEELI 203 >gi|17232200|ref|NP_488748.1| thymidylate kinase [Nostoc sp. PCC 7120] gi|23821788|sp|Q8YN62|KTHY_ANASP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|17133845|dbj|BAB76407.1| thymidylate kinase [Nostoc sp. PCC 7120] Length = 211 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 6/215 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG+EG GKT+ + L +LQ V +TREPGGT R +LL D+ Sbjct: 2 GGRFIVFEGVEGCGKTSQMQLCAEWLQSLGISVVLTREPGGTELGLDLRRLLLQKAEDKP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E +++AA R HV ++P L +GK +LCDR++DS+ AYQG + + L Sbjct: 62 IAEVTELLLYAADRAQHVAQELKPKLAQGKYILCDRYVDSTIAYQGYGRNLDMNLIHQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +I+ + D TI LD+ V++GL R + ++ LD E++ + H + +Q + D+A Sbjct: 122 DIATGGLTSDITIWLDVDVEVGLARKRG-----DNVGLDRIEQETIAFHRRVQQGYADLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P R VD S ++V I I+ +++ + Sbjct: 177 ASSPKRIIRVDGQLSKETVHKTIQEILSVHLKQWL 211 >gi|134295921|ref|YP_001119656.1| thymidylate kinase [Burkholderia vietnamiensis G4] gi|166221731|sp|A4JEW8|KTHY_BURVG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|134139078|gb|ABO54821.1| thymidylate kinase [Burkholderia vietnamiensis G4] Length = 206 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 107/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ K + V VTREPGGTP EA R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCERLQAKLAAGDRQVVVTREPGGTPLGEALREMLLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLARVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASERRGA------ARAPDKFESETDAFFTRTRDE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A+ P R IVD+ + + + ++ L Sbjct: 172 YLRRAQEAPHRFTIVDATQTIPEIRGRLERVLAAL 206 >gi|312869713|ref|ZP_07729860.1| dTMP kinase [Lactobacillus oris PB013-T2-3] gi|311094762|gb|EFQ53059.1| dTMP kinase [Lactobacillus oris PB013-T2-3] Length = 218 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLSCGVD 60 G FISFEG +GAGKT+ + +++ L + D V TREPGG +E R VL S Sbjct: 6 QGKFISFEGPDGAGKTSVLRAIQQQLVDQLGADRVMYTREPGGNHISEQIRQVLFSPENT 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++FAAAR H+ + I P L GK++LCDR++DSS AYQG + + Sbjct: 66 DMDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRHLGEQVIWQM 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ ++PD TI LD+ ++GL+R+ + ++ + + + H+ R +L + Sbjct: 126 NQFAIDGLLPDLTIYLDVESEVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRL 181 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + PDR ++D+ V + + + Sbjct: 182 YQAHPDRIKLIDAGQPLDQVIAAVAQTIHQ 211 >gi|328906772|gb|EGG26544.1| dTMP kinase [Propionibacterium sp. P08] Length = 209 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ EG +GAGKTT LL ++L + +TREPG + + R ++LS Sbjct: 7 GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EG++++CDR++DS+ AYQG + L Sbjct: 67 CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FL +A Sbjct: 127 WATVGLVPDVTVLLDVDPCEGTAKIAAK---------DRLEAAGDEFHLRVRQHFLSLAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ + + ++ I + V L+ + Sbjct: 178 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 209 >gi|88810823|ref|ZP_01126080.1| thymidylate kinase [Nitrococcus mobilis Nb-231] gi|88792453|gb|EAR23563.1| thymidylate kinase [Nitrococcus mobilis Nb-231] Length = 222 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 6/210 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EGIEGAGKT+ + L + L+ + + +TREPGGT EA R +LL Sbjct: 14 RFITVEGIEGAGKTSCLDYLAKLLRNQAIEAVLTREPGGTSLGEAVRALLLDHRFRGMAG 73 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++ AAR H+ VIRPAL G+ ++CDRF D++YAYQG + + L+ + Sbjct: 74 DAETLLVFAARAQHLAEVIRPALAAGQWVVCDRFTDATYAYQGGGRALGATRVGLLEHWA 133 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 E+ PD T+ LD+PV +GL R+ +R + LD FE + E+ R ++L+ R + Sbjct: 134 QSELRPDRTLYLDVPVTVGLGRIASRGN------LDRFESERQAFFERVRCVYLERCRAE 187 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R +++ S ++V T I + +L+ Sbjct: 188 PQRMRRIEADGSREAVHTQIAAALADLLND 217 >gi|313835739|gb|EFS73453.1| thymidylate kinase [Propionibacterium acnes HL037PA2] gi|314928412|gb|EFS92243.1| thymidylate kinase [Propionibacterium acnes HL044PA1] gi|314970109|gb|EFT14207.1| thymidylate kinase [Propionibacterium acnes HL037PA3] Length = 215 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F+ EG +GAGKTT LL ++L + +TREPG + + R ++LS Sbjct: 13 GGVFVVLEGGDGAGKTTQSRLLDQWLTAEGVPHLMTREPGDSWLGQRIRELVLSPDSGPI 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AEA+++ A + HV+ V+ PAL EG++++CDR++DS+ AYQG + L Sbjct: 73 CSRAEALLYNADKAQHVDEVVIPALREGRVVVCDRYVDSTIAYQGAGRVLDPNEVAQLAS 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++PD T++LD+ G ++ + D E H + RQ FL +A Sbjct: 133 WATVGLVPDVTVLLDVDPCEGTAKIAAK---------DRLEAAGDEFHLRVRQHFLSLAA 183 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++++ + + ++ I + V L+ + Sbjct: 184 AHPQRYLVLNARKTREEISEAICHRVAGLLNR 215 >gi|239630116|ref|ZP_04673147.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301067265|ref|YP_003789288.1| thymidylate kinase [Lactobacillus casei str. Zhang] gi|239527728|gb|EEQ66729.1| thymidylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439672|gb|ADK19438.1| Thymidylate kinase [Lactobacillus casei str. Zhang] Length = 214 Score = 244 bits (625), Expect = 5e-63, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 113/209 (54%), Gaps = 4/209 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ + L L++ +H+TREPGG +E R V+L Sbjct: 2 TGTFITFEGPDGAGKTSVLKTLIPQLEQHVRVPLHLTREPGGAKISETIREVILDPANTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA+++AA+R H+ VI+PAL +G I++CDRF+DSS AYQG + + Sbjct: 62 MDARTEALLYAASRRQHLVEVIQPALAQGDIVVCDRFVDSSVAYQGGGREIGPDAVLKMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P T+ LD+PV +GL R+++ + R+ D +++ + HE+ ++ + Sbjct: 122 QFATAGLEPALTLYLDVPVQMGLDRIKSHQNERQY---DRLDQESLAFHERVHDAYMTLI 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P R +D+ + V + Sbjct: 179 VDNPQRIVSIDATEPLEKVVAACFQTITR 207 >gi|184154763|ref|YP_001843103.1| thymidylate kinase [Lactobacillus fermentum IFO 3956] gi|227514030|ref|ZP_03944079.1| dTMP kinase [Lactobacillus fermentum ATCC 14931] gi|260663208|ref|ZP_05864100.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN] gi|238692945|sp|B2GAE1|KTHY_LACF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|183226107|dbj|BAG26623.1| thymidylate kinase [Lactobacillus fermentum IFO 3956] gi|227087616|gb|EEI22928.1| dTMP kinase [Lactobacillus fermentum ATCC 14931] gi|260552400|gb|EEX25451.1| thymidylate kinase [Lactobacillus fermentum 28-3-CHN] Length = 214 Score = 244 bits (625), Expect = 6e-63, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 5/208 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FISFEG +GAGKT+ ++ ++ L + V TREPGG P AE R VLL Sbjct: 2 SGRFISFEGPDGAGKTSVLTAIRTGLVNQLGDQVVYTREPGGNPIAEQVRAVLLDKQNGA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA+R HV ++PAL GK++LCDR+LDSS AYQG + L Sbjct: 62 MDDWTEALLYAASRRQHVVETLKPALEAGKLILCDRYLDSSIAYQGGGRELGIDRIWELN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ ++PD TI LDLPV+ GL R++ + ++ + + H + RQ +L +A Sbjct: 122 QYAIDGLLPDLTIFLDLPVETGLARIEK----GRAETINRLDEQTTNFHRRVRQAYLTLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 P+R V++ V ++ + + Sbjct: 178 ERFPERIVKVNADQELARVIEDVRSAIH 205 >gi|268315735|ref|YP_003289454.1| thymidylate kinase [Rhodothermus marinus DSM 4252] gi|262333269|gb|ACY47066.1| thymidylate kinase [Rhodothermus marinus DSM 4252] Length = 220 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ISFEGI+G GK+T LL + L+ Y + REPGGT +E R +LL +D Sbjct: 1 MLISFEGIDGCGKSTQARLLAQRLETAGYRTLLVREPGGTELSERIRGLLLDPALD-IDP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEI 123 AE ++F+AAR V IRPAL G I+LCDRF DS+ AYQG + +L Sbjct: 60 FAELLLFSAARRQLVVERIRPALQAGYIVLCDRFYDSTTAYQGGGRGVVELAWLRDFNRR 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++PD T LD+P+++ L R ++ D ER D E+ R + +A Sbjct: 120 VTDGLVPDRTYWLDVPLEVALAR------RDQAGDPDRMERADPAFFERVRATYAQLATE 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +PDR +D+ S +++ I N V L+ Sbjct: 174 EPDRILRLDATASIETLHETIWNDVQRLL 202 >gi|189485350|ref|YP_001956291.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287309|dbj|BAG13830.1| thymidylate kinase [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 211 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 1/212 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI+FEG EG+GKTTH LLK++L+++ Y+V +TREPGGT AEA R +LL+ + Sbjct: 1 MKKNLFITFEGGEGSGKTTHSLLLKKYLEKRGYEVLLTREPGGTILAEAVRRILLNPDSN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E ++ AAR HVE + PAL GK ++CDRF D++ AYQG +DSL Sbjct: 61 -IVPLSELFLYEAARAQHVEEFVFPALNAGKAVICDRFTDATVAYQGYGRKLNLQLIDSL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + P TI LD+ GL R + L D ER+ + HE R+ +L Sbjct: 120 NSTTSFGLTPVLTIYLDILPSEGLSRAKRAKKLNRKIYSDKIERESLQFHESVREGYLSQ 179 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P+R +V + + + I I+ ++ Sbjct: 180 AEKYPERIKVVKTQETVEKTEVCIREIIDLVL 211 >gi|227496773|ref|ZP_03927046.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434] gi|226833726|gb|EEH66109.1| thymidylate kinase [Actinomyces urogenitalis DSM 15434] Length = 265 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 82/219 (37%), Positives = 111/219 (50%), Gaps = 8/219 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+SFEG +G GKTT I L L+ D VTREPGGT R +LL G E Sbjct: 19 GLFLSFEGGDGVGKTTQIHRLSGLLEAAGVDCLVTREPGGTELGAEIRRLLLHGG--EVS 76 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AEA+++AA R HV+ +RPAL G +++ DR+LDSS AYQG S + L Sbjct: 77 ARAEALLYAADRAHHVQTRVRPALARGGVVITDRYLDSSVAYQGAARSLGSQEVRDLSLW 136 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q ++PD TI+LD I E A LD ER+ H R+ FL +A Sbjct: 137 ATQGLLPDLTILLDAEPGI------AARRAGERAALDRLEREPSSFHVALREEFLALAAA 190 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 +P R ++D+ + VA + V L++ R Sbjct: 191 EPGRFVVIDADRGVEEVAEQVTAAVVRLIRSRTESPGGH 229 >gi|330686068|gb|EGG97690.1| dTMP kinase [Staphylococcus epidermidis VCU121] Length = 203 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT + + L ++YDV TREPGG P E R V+L ++ Sbjct: 4 FITFEGPEGSGKTTVLKAVAEKL-AQHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL +I+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L + +++D+ HEK + + + N+P Sbjct: 121 NGLYPDLTIYLDVSAEVGRERI-----LSNQRDQNRLDQEDIDFHEKVIEGYHQVIHNEP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +D+ S + V + + ++ Sbjct: 176 ERFVQIDADQSIEEVVLATYQSIIKYLK 203 >gi|293391495|ref|ZP_06635829.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952029|gb|EFE02148.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D7S-1] Length = 210 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T + L+ +V TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRHLIKHENEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L SL++ Sbjct: 63 TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ +GL R + R LD E+++ + R +L++ + Sbjct: 123 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + P + I+D+A + V +I + V Sbjct: 177 DNP-KAVIIDAAQPVEQVRADIQSAVKNW 204 >gi|254483666|ref|ZP_05096886.1| thymidylate kinase [marine gamma proteobacterium HTCC2148] gi|214036077|gb|EEB76764.1| thymidylate kinase [marine gamma proteobacterium HTCC2148] Length = 215 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+ EG EG GK+T+++ +++ L D+ VTREPGGT E R +LL + Sbjct: 3 SRGLFITVEGGEGVGKSTNMAYMQQHLTDLGIDLLVTREPGGTALGEDIRELLLRPRQES 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE ++ AAR H+E V+ PAL G+ +LCDRF D++YAYQG + L+ Sbjct: 63 MASGAELLLIFAARAQHLEQVVEPALANGRWVLCDRFTDATYAYQGGGRGLAVTMIRELE 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ E+ PD T++LD PV +G+ R + R LD FE + E+ R +L +A Sbjct: 123 QLVQGELRPDYTLLLDAPVAVGMSRARER------GELDRFELEQTAFFERVRASYLQLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R +VD++ V + I EL Sbjct: 177 SESSGRYRVVDASKELVEVEQQLQEICSEL 206 >gi|325570727|ref|ZP_08146453.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755] gi|325156573|gb|EGC68753.1| thymidylate kinase [Enterococcus casseliflavus ATCC 12755] Length = 220 Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GLFI+ EG +GAGKT+ I L LQ + TREPGG AE R ++L +E Sbjct: 7 NGLFITIEGPDGAGKTSVIEELYPRLQLEATRKIVKTREPGGVKIAEKIRKIILDPRNEE 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ V+ PAL G I++CDRF+DSS AYQG + + Sbjct: 67 MDERTEALLYAAARRQHLIEVVLPALNAGHIVICDRFVDSSLAYQGAGRRIGIPEIARIN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T+ LD+ D GL+R+Q + D + + + H++ R +L +A Sbjct: 127 EFATEGTTPDFTLYLDVDSDTGLRRIQEN----RAHQYDRLDSEGLEFHQRVRHAYLKLA 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R H +D+ Q V + + + E Sbjct: 183 EENPVRIHKIDARMGLQEVVESSYSAIVE 211 >gi|90417679|ref|ZP_01225591.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1] gi|90337351|gb|EAS51002.1| thymidylate kinase [Aurantimonas manganoxydans SI85-9A1] Length = 222 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 134/205 (65%), Gaps = 3/205 (1%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 +FEG EG+GKTT I+ L L+ + +DV TREPGG+P A+A RHV+LS + G E E Sbjct: 2 TFEGGEGSGKTTQIARLAGHLRSEGHDVVTTREPGGSPGADALRHVILSGAAEGLGVEVE 61 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A++FAAAR DHV+ +IRPAL GKI+LCDRF DS+ YQ + D+++ ++ + Sbjct: 62 AMLFAAARADHVDTLIRPALDAGKIVLCDRFHDSTRVYQFLDSELDQDYRDAMERAALGD 121 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 ++P+ TIILD+P +G++R + R R D FE++D +HE+RRQ F +A ++P+R Sbjct: 122 LLPNLTIILDVPASVGVERARQR---RADHSPDRFEKEDEALHERRRQAFRKLAEDEPER 178 Query: 188 CHIVDSAHSFQSVATNILNIVWELV 212 C IVD + VA I +++ + + Sbjct: 179 CVIVDGTQAEDKVAAEIRDLIDDRL 203 >gi|242371688|ref|ZP_04817262.1| dTMP kinase [Staphylococcus epidermidis M23864:W1] gi|242350637|gb|EES42238.1| dTMP kinase [Staphylococcus epidermidis M23864:W1] Length = 208 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 9/214 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI+FEG EGAGKT+ I+ + + L +++DV TREPGG P E R V+L Sbjct: 1 MNKMSAFITFEGPEGAGKTSVITKVSQKL-AEDFDVITTREPGGVPTGEEIRRVVLDG-- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EA++FAA+R +H+ + PAL +GKI+LCDR++DSS AYQG + + Sbjct: 58 DNMDIRTEAMLFAASRREHLVEKVIPALKDGKIVLCDRYIDSSLAYQGYARGIGIEEVQT 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E ++ + PD TI LD+ ++G +R+ L+ + + +++D HEK + + Sbjct: 118 LNEFAINGLYPDLTIYLDVSAEVGRQRI-----LKNNRDQNRLDQEDKAFHEKVIEGYHK 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P+R V++ + ++V + + ++ Sbjct: 173 VIEGNPERFVKVNANQNLENVVEEAYQSIIKYLK 206 >gi|227545157|ref|ZP_03975206.1| dTMP kinase [Lactobacillus reuteri CF48-3A] gi|300909170|ref|ZP_07126631.1| thymidylate kinase [Lactobacillus reuteri SD2112] gi|227184889|gb|EEI64960.1| dTMP kinase [Lactobacillus reuteri CF48-3A] gi|300893035|gb|EFK86394.1| thymidylate kinase [Lactobacillus reuteri SD2112] Length = 213 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ I +++ L+ + V TREPGG +E R VL + Sbjct: 3 GKFISFEGPDGAGKTSVIQQIQQQLEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDRF+DSS AYQG + + Sbjct: 63 MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ +MP TI LD+ +IGL+R+ S ++ +++ + H+ RQ +L + Sbjct: 123 QFAIDGLMPSLTIYLDIESEIGLRRIAE----HRSNQINRLDKEKLAFHQTVRQSYLKLY 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +N P+R ++D++ + V ++ + + Sbjct: 179 KNYPERIKLIDASQPLEKVIEDVKATIHD 207 >gi|229818395|ref|ZP_04448676.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM 20098] gi|229784265|gb|EEP20379.1| hypothetical protein BIFANG_03700 [Bifidobacterium angulatum DSM 20098] Length = 215 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 17/221 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M+ G+FISFEG++G GKTT ++ L+ L+ +V VTREPGGT A R +LL Sbjct: 3 MHQGIFISFEGVDGVGKTTQVNRLRDELEAMGREVVVTREPGGTALGTAIRRLLLHGVPV 62 Query: 58 ------GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + EA++FAA R HV VIRPAL G +++ DR+ DSS AYQ Sbjct: 63 ESADGEACADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYCDSSLAYQAGGRE 122 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + SL + ++P T +LD+ + R+ + D E Sbjct: 123 LTAAEIRSLSMWATDGLLPVRTYLLDMDPALSHTRLDH--------DEDRMEAAGSAFQR 174 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + RQ FLD+A +P+R ++D++ + + V I L+ Sbjct: 175 RTRQAFLDLAAREPNRFRVIDASGTVEEVWQAIREDFVGLL 215 >gi|229544854|ref|ZP_04433579.1| thymidylate kinase [Enterococcus faecalis TX1322] gi|229310022|gb|EEN76009.1| thymidylate kinase [Enterococcus faecalis TX1322] Length = 212 Score = 244 bits (624), Expect = 7e-63, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 5/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+FEG +GAGKT+ + + L + + TREPGG P AE R V+L D Sbjct: 2 QGIFITFEGPDGAGKTSVLKEVSERLAKESKRKIVTTREPGGIPIAEKIRTVILDPRNDR 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL G ++LCDRF+DSS AYQG + S+ Sbjct: 62 MDERTEALLYAAARRQHLVEKILPALEAGHLVLCDRFVDSSLAYQGAGRRIGIAPIASIN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + V PD TI LD+ D GL+R+Q + +D + + + H++ R +L +A Sbjct: 122 AFATEGVSPDFTIYLDVDSDTGLRRIQENRTQ----QIDRLDSEGLEFHQRVRHEYLKLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R +D+ S + V + E Sbjct: 178 EENPQRIKKIDARMSLELVVEVTYQAIIE 206 >gi|30995377|ref|NP_438617.2| thymidylate kinase [Haemophilus influenzae Rd KW20] gi|260580481|ref|ZP_05848309.1| thymidylate kinase [Haemophilus influenzae RdAW] gi|260092823|gb|EEW76758.1| thymidylate kinase [Haemophilus influenzae RdAW] Length = 219 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 131 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213 >gi|124267049|ref|YP_001021053.1| thymidylate kinase / thymidylate synthase [Methylibium petroleiphilum PM1] gi|124259824|gb|ABM94818.1| thymidylate kinase / thymidylate synthase [Methylibium petroleiphilum PM1] Length = 215 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 13/212 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FISFEGI+GAGK++H+ + QR+ +V TREPGGTP AE R ++L G Sbjct: 10 SGRFISFEGIDGAGKSSHLDAVAERWQRRGLEVVRTREPGGTPLAETLRDLVLHQG---M 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++ AAR +H++ I PAL G ++LCDRF D+++AYQG L +L+ Sbjct: 67 DALTEALLIFAARRNHLQQCIAPALERGAVVLCDRFTDATFAYQGAGRGFDLAVLTTLES 126 Query: 123 ISVQEV----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + PD T+ DL + +R+ + D FER+D + R + Sbjct: 127 WVQRGPGGLRQPDLTLWFDLDPAVAAQRLVA------ARTPDRFERQDEAFFHRVRDGYR 180 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 QP+R +D++ S VA I ++ E Sbjct: 181 ARFEAQPERFVRIDASQSRDQVAVQIAAMLAE 212 >gi|306834090|ref|ZP_07467210.1| thymidylate kinase [Streptococcus bovis ATCC 700338] gi|304423663|gb|EFM26809.1| thymidylate kinase [Streptococcus bovis ATCC 700338] Length = 211 Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIITTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDNKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIIRRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ +IGL R+ ++ + + + +H++ R+ +L + Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVREGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + R +D++ V + L+ + E + K Sbjct: 177 TEQEK-RIVTIDASRELAEVVSETLHTILEQLAK 209 >gi|259502695|ref|ZP_05745597.1| dTMP kinase [Lactobacillus antri DSM 16041] gi|259169340|gb|EEW53835.1| dTMP kinase [Lactobacillus antri DSM 16041] Length = 218 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 6/216 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLSCGVD 60 G FISFEG +GAGKT+ + +++ L + D V TREPGG +E R VL S Sbjct: 6 RGKFISFEGPDGAGKTSVLRAIQKRLVDQLGADRVMYTREPGGNHISEQIRRVLFSPENT 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++FAAAR H+ + I P L GK++LCDR++DSS AYQG + + Sbjct: 66 DMDGRTEALLFAAARRQHIVSEIVPGLRAGKVILCDRYVDSSIAYQGAGRQLGEEAIWQM 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ ++PD TI LD+ +GL+R+ + ++ + + + H+ R +L + Sbjct: 126 NQFAIDGLLPDLTIYLDVESAVGLRRIAE----HRADQVNRLDEEKLAFHQTVRAAYLRL 181 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R PDR ++D++ V ++ + + R Sbjct: 182 YRAHPDRIKLIDASQPLDQVIADVAQTIEQRFPDRF 217 >gi|57234426|ref|YP_181510.1| thymidylate kinase [Dehalococcoides ethenogenes 195] gi|123618736|sp|Q3Z8D9|KTHY_DEHE1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|57224874|gb|AAW39931.1| thymidylate kinase [Dehalococcoides ethenogenes 195] Length = 207 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 108/209 (51%), Gaps = 7/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+FEG EG GK+T L R+L++ +T EPGGT + + +L + Sbjct: 3 LFITFEGGEGCGKSTQSKALYRYLKKLGLGCVLTHEPGGTRSGDKITRLLKWSEEENISP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A+R ++NVI+PAL++G I++CDR+ DS+ AYQG + + + ++ Sbjct: 63 LAELFLFNASRSILIDNVIKPALLDGNIVICDRYTDSTLAYQGYGRGLELDTVKCINSLA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD TI LD+ L R + D FE ++ H++ R F IA + Sbjct: 123 SGGLVPDLTIWLDMDDKAALLR-------KGKLPPDRFESENNGFHQRVRDGFGVIAAAE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R +D++ S + I V L++ Sbjct: 176 PNRFLKLDASLSQSELTKCIKQRVNALLK 204 >gi|88859588|ref|ZP_01134228.1| thymidylate kinase [Pseudoalteromonas tunicata D2] gi|88818605|gb|EAR28420.1| thymidylate kinase [Pseudoalteromonas tunicata D2] Length = 209 Score = 244 bits (623), Expect = 9e-63, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 7/211 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG+EGAGK+T I+L + L+ + TREPGGTP AE+ R+++ + + A Sbjct: 4 KFIVIEGLEGAGKSTAIALCQEILKAHQVNFVNTREPGGTPLAESLRNLVKATHQEIMSA 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ AAR + NVIRPAL G+ +L DR SS AYQG L++L I Sbjct: 64 EAELLIMYAARAQLLTNVIRPALANGQWVLGDRHNLSSLAYQGGGRELDSSTLNALSNIV 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ + PD TI LD+ +GL R R LD E++ + E+ R +L IA + Sbjct: 124 LKGLKPDLTIYLDIDPAVGLARAAGR------GALDRIEQEQLSFFERTRAQYLAIAASD 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P +V + +V +I ++ + ++ Sbjct: 178 PS-IKVVQAGQEISAVHQDIRAVLTAFLVEQ 207 >gi|297582371|ref|YP_003698151.1| thymidylate kinase [Bacillus selenitireducens MLS10] gi|297140828|gb|ADH97585.1| thymidylate kinase [Bacillus selenitireducens MLS10] Length = 210 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 4/202 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EG EGAGKT+ + L + L + +DV +TREPGG+ AE R V+L E Sbjct: 6 RFITVEGGEGAGKTSVLKDLHQALILEGHDVLMTREPGGSVIAEKIRDVILDPAHKEMDD 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AAAR H+ + P L +G ++LCDR++DSS YQG + L + Sbjct: 66 RTEALLYAAARRQHLTEKVLPHLEKGGVVLCDRYVDSSLVYQGGARGIGIEEVRELNHFA 125 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P T D+ ++GL R+ + + + + + HE+ R +L +A+ + Sbjct: 126 TEAFYPGKTFYFDVSPEVGLGRIAAN----KGREFNRLDGESLAFHEQVRATYLTLAKEE 181 Query: 185 PDRCHIVDSAHSFQSVATNILN 206 P R ++D+ + V ++L Sbjct: 182 PARITVIDAERTQDEVLRDVLQ 203 >gi|119897886|ref|YP_933099.1| thymidylate kinase [Azoarcus sp. BH72] gi|119670299|emb|CAL94212.1| dTMP kinase [Azoarcus sp. BH72] Length = 206 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 8/210 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGI+GAGK++ I+ + L+ + V +REPGGTP E R + Sbjct: 1 MQHGRFITFEGIDGAGKSSQIAAVVDILRARGCTVEQSREPGGTPLGERLRE---LLLHE 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA++ AAR +H+ I PAL G ++CDRF D++YAYQ D+L Sbjct: 58 PMNLETEALLMFAARREHLAARIVPALQAGNWVVCDRFSDATYAYQVGGRGLAREKFDAL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T++ DLP +I RV + A D FER+ E+ R +L+ Sbjct: 118 EAWVHPGLQPDLTLVFDLPPEIAAARV-----VSSGAQPDRFEREQRDFFERVRNAYLER 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ P R ++D+ + + I +V E Sbjct: 173 AQAAPQRIRVIDANRPPEVIRAEIEQLVVE 202 >gi|193212981|ref|YP_001998934.1| dTMP kinase [Chlorobaculum parvum NCIB 8327] gi|238692645|sp|B3QP81|KTHY_CHLP8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|193086458|gb|ACF11734.1| dTMP kinase [Chlorobaculum parvum NCIB 8327] Length = 217 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T + LKR LQ + +V REPGGTP AE R +LL D + Sbjct: 1 MLITFEGIDGAGKSTQVVKLKRHLQERGREVLTLREPGGTPVAEQIRELLLESHND-ITS 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F+A+R + +E +I PAL +G ++ DRF DS+ AYQG L + I+ Sbjct: 60 IAELLLFSASRAELMEKIIVPALEDGCDVILDRFFDSTTAYQGYGRGLNLDMLAEINRIA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LDL + L R + SL ES LD E + +++ R + I Sbjct: 120 SHGIRPDITFYLDLTPEDALLRKFSEKSLPLAFESEELDRMENSGLEFYQRVRAGYHAIL 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +P R ++D+ + Q + IL+ + L Sbjct: 180 EAEPQRIIMIDALLTPQEIHRKILSALQAL 209 >gi|262278188|ref|ZP_06055973.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202] gi|262258539|gb|EEY77272.1| thymidylate kinase [Acinetobacter calcoaceticus RUH2202] Length = 199 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 +P+R +D+ S V L + Sbjct: 174 EPERIKRLDATRSPDQVFEQALQYLR 199 >gi|296135948|ref|YP_003643190.1| thymidylate kinase [Thiomonas intermedia K12] gi|295796070|gb|ADG30860.1| thymidylate kinase [Thiomonas intermedia K12] Length = 215 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 113/213 (53%), Gaps = 9/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF+S EGI+GAGK+T + + L+ N V +TREPGGT E R +LL Sbjct: 8 RPGLFVSLEGIDGAGKSTQLQTVVDVLRAANRQVMLTREPGGTEIGEKIRELLLHQ---T 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++ AAR +HV VI PAL+ G ++CDRF ++ AYQG L++L Sbjct: 65 MRPATEALLMFAARQEHVLRVIEPALLGGTDVVCDRFTAATLAYQGGGKGIPTERLEALA 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PDC I++D+P ++ +R+ + D FE++ V + R +L A Sbjct: 125 RWVHPGLCPDCIILIDVPPEVAAQRLAQ------TRQRDRFEQESVDFFARVRANYLQQA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P++ ++D + ++V I + + +++Q+ Sbjct: 179 ASAPEKWRVIDGTQTPEAVQKTITDYLKKVLQE 211 >gi|262373085|ref|ZP_06066364.1| thymidylate kinase [Acinetobacter junii SH205] gi|262313110|gb|EEY94195.1| thymidylate kinase [Acinetobacter junii SH205] Length = 199 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 8/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ +++ +V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRTLLLAVNHDELMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GKI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQCAGRGLSQEKLQLLNQT 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MP+ T LD P+++G+ R + R LD FE++ + K R + + + Sbjct: 121 FV-AKMPNITFWLDAPIELGMTRARER------GALDRFEQEKLSFFAKVRAGYKTLWQA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 +P+R +D+ + V L + Sbjct: 174 EPERIKRLDATQNADVVFEEALQYLK 199 >gi|261377929|ref|ZP_05982502.1| dTMP kinase [Neisseria cinerea ATCC 14685] gi|269145789|gb|EEZ72207.1| dTMP kinase [Neisseria cinerea ATCC 14685] Length = 206 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 65/203 (32%), Positives = 115/203 (56%), Gaps = 7/203 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGK+T+++ +K + +R+ V TREPGGT EA R +LL+ G Sbjct: 5 FITLDGIDGAGKSTNLAAIKAWFERRRLPVLFTREPGGTALGEALREILLNPATKA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ A+R+ H+E VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 AETLMMFASRMQHIEEVILPALSDGIHVVSDRFTDATFAYQGGGRGMPSEDIEILEHWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T++LD+P+++ + R+ + D FE++ + R ++L+ A P Sbjct: 124 GSLKPDLTLLLDVPLEVSMARIGQ------AREKDRFEQEQADFFMRVRGVYLNRATACP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 +R ++D S + V +I ++ Sbjct: 178 ERYAVIDGNRSVEEVRNSIEKVL 200 >gi|152973878|ref|YP_001373395.1| thymidylate kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189028827|sp|A7GJU2|KTHY_BACCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|152022630|gb|ABS20400.1| dTMP kinase [Bacillus cytotoxicus NVH 391-98] Length = 208 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GK+T I+ L + + K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKSTLITKLLPYFENKGQKVIATREPGGIAISEEIRTILHKKEYTTM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL +++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEADQLVLCDRFIDSSLAYQGYARGLGIDKVYEMNR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ + ++ + + + H R+ +L I Sbjct: 122 FATEDCMPSLTIYLDIAPEVGLARIEK----DAAREVNRLDMESIAFHRLVREGYLQIVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ ++V ++ ++ + Sbjct: 178 RFKDRIVVVNADQPMENVVEEVIQLIESKL 207 >gi|269217490|ref|ZP_06161344.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332] gi|269213111|gb|EEZ79451.1| dTMP kinase [Actinomyces sp. oral taxon 848 str. F0332] Length = 210 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 10/209 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG +G+GKTT + LL +L+ + +DV TR+PGGT R +LL G + Sbjct: 1 MFITFEGGDGSGKTTQMQLLAEWLRGRGFDVVTTRDPGGTELGRHIRKLLLHGG--DVSP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AEA+++AA R +V V+RPAL G I+L DR++DSS AYQG + + L Sbjct: 59 RAEALLYAADRAHNVATVVRPALERGAIVLADRYIDSSAAYQGAGRTLGEDEVRGLSLWG 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + +MPD T+ LDLP + R+ D E HE R+ +L A + Sbjct: 119 TEGLMPDLTVFLDLPAEALASRL--------GGSFDRIEAAGARFHEDVRRAYLRFAAAE 170 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R VD+ + +A + V E ++ Sbjct: 171 PERWFTVDATVPRERIAETVRARVAEALE 199 >gi|239637468|ref|ZP_04678442.1| thymidylate kinase [Staphylococcus warneri L37603] gi|239596913|gb|EEQ79436.1| thymidylate kinase [Staphylococcus warneri L37603] Length = 203 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT + + L ++YDV TREPGG P E R V+L ++ Sbjct: 4 FITFEGPEGSGKTTVLKAVAEKL-AQHYDVISTREPGGVPTGEEIRKVVLEG--NQMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL +I+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVMPALRNNQIVLCDRYIDSSLAYQGYARGIGIEEVKALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L + +++D+ HEK + + + N+P Sbjct: 121 NGLYPDLTIYLDVSAEVGRERI-----LSNQRDQNRLDQEDIDFHEKVIEGYHRVIHNEP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +D+ S V + + ++ Sbjct: 176 ERFVQIDADQSIDKVVLAAYQSIIKYLK 203 >gi|288905947|ref|YP_003431169.1| thymidylate kinase [Streptococcus gallolyticus UCN34] gi|288732673|emb|CBI14245.1| thymidylate kinase [Streptococcus gallolyticus UCN34] Length = 211 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 110/214 (51%), Gaps = 5/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ ISFEG +GAGKTT + + LQ K YD+ TREPGG AE R V+L Sbjct: 1 MKNGIIISFEGPDGAGKTTVLEQVLPVLQEKGYDIVTTREPGGVEIAERIRDVILDVNHV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ E +++ AAR H + PAL GK++L DRF+DSS AYQG + L Sbjct: 61 AMDSKTELLLYMAARRQHYVEKVLPALEAGKVVLIDRFIDSSIAYQGAGRGLDKDIITRL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ +IGL R+ ++ + + + +H++ R+ +L + Sbjct: 121 NDFATDGRKPDLTLYFDVESEIGLARIAKNAE----REVNRLDLEKLDMHKRVRKGYLAL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A + R +D++ V L+ + E + K Sbjct: 177 AEQEK-RIVTIDASRELADVVLETLHTILEQLAK 209 >gi|126726755|ref|ZP_01742595.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150] gi|126704084|gb|EBA03177.1| Thymidylate kinase [Rhodobacterales bacterium HTCC2150] Length = 209 Score = 243 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 78/204 (38%), Positives = 110/204 (53%), Gaps = 6/204 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEGI+G+GK+T L L +DV TREPGG+ AE R +L+ D + AE Sbjct: 12 FITFEGIDGSGKSTQAKRLVAHLTSLGHDVIHTREPGGSAGAEEIRRLLVEGDPDRWSAE 71 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++F AAR DH+E I PAL GK ++ DRF DS+ YQG +D+L + Sbjct: 72 TEILLFTAARRDHLEKTIIPALAAGKWVVSDRFADSTRVYQGATRGDLRGIVDALHAQMI 131 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 V PD T I+D+ L R R S D FE + E+ RQ FLD+A++ P Sbjct: 132 -GVEPDMTFIIDMDPVAALSRGLARKS-----GEDRFEDFGLDFQERLRQGFLDLAKDYP 185 Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209 DRC ++D + +V+ +I + Sbjct: 186 DRCRLIDGSRGIDAVSADITAVFE 209 >gi|229487554|sp|A3M7Q1|KTHY_ACIBT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|193078024|gb|ABO12945.2| thymidylate kinase [Acinetobacter baumannii ATCC 17978] Length = 199 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 8/205 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + + + V +TREPGGTP AE R +LL+ DE Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQ- 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + MP+ T LD P+++G+ R + R LD FE++ + K R+ + + + Sbjct: 120 NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFTKVREGYETLWKV 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R +D+ S V L + Sbjct: 174 EPERIKRLDATQSPDQVFEQALQYL 198 >gi|257094047|ref|YP_003167688.1| thymidylate kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046571|gb|ACV35759.1| dTMP kinase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 211 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 76/207 (36%), Positives = 117/207 (56%), Gaps = 8/207 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEGI+GAGK++HI+ + FL+R+ V TREPGGTP EA R +LL + Sbjct: 8 RRGKFITFEGIDGAGKSSHIAGVAAFLRRRGLQVLTTREPGGTPLGEALRELLLH---EA 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ AAR +H+ VI PAL G ++CDRF D++YAYQ + L+ Sbjct: 65 MHLETEALLMFAARREHLARVIEPALERGDWVVCDRFSDATYAYQSGGRGLERKKFAQLE 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD T++ DL I R+ + ++ LD FE++ HE+ R+ +L+ A Sbjct: 125 EWVHSHLQPDLTLLFDLSSSIASGRI-----VAQARELDRFEQERSDFHERVRRAYLERA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P R I+D+ + +++ I +I+ Sbjct: 180 IAAPQRIQIIDAEQAPEAIKKMIEDII 206 >gi|254486634|ref|ZP_05099839.1| thymidylate kinase [Roseobacter sp. GAI101] gi|214043503|gb|EEB84141.1| thymidylate kinase [Roseobacter sp. GAI101] Length = 210 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 7/216 (3%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M S G FISFEGI+G+GK+T +LK L+ YDV +TREPGG+P AE R ++L Sbjct: 1 MKSQGFFISFEGIDGSGKSTQTKILKESLEALGYDVILTREPGGSPGAEEIRALVLQGDP 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D + A+ E ++F AAR DH+E I+PAL GK+++CDRF DS+ YQG +D Sbjct: 61 DRWSAQTEILLFTAARRDHLERTIQPALDAGKVVICDRFADSTRMYQGLSRGDLRDAVDQ 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + + PD T+++D+ GL R +R ++ E FE + R+ FL Sbjct: 121 LHALMI-GIEPDLTVLIDMDPAEGLSRALSRNTVEE-----RFEDFGESLQVAMRKGFLA 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A DR ++D A VA ++L + R Sbjct: 175 LAEEFDDRFVVIDGARQIDQVAADVLAQTRARLDAR 210 >gi|330428264|gb|AEC19598.1| Thymidylate kinase [Pusillimonas sp. T7-7] Length = 216 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 5/215 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GL I +G GAGK T + ++ FL +V +TREPGGT E R +LL Sbjct: 1 MNKGLMIVVDGGNGAGKGTCLHDIEAFLSGLGLEVVMTREPGGTAIGEQIREILLDKSAV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++FAAAR HV I PA+ GK+++ DRF ++ ++Q ++SL Sbjct: 61 EMCDVTELMLFAAARAQHVRQKIVPAINAGKVVVSDRFDSATISFQHYARGLDLELINSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+V + PD TIILDL +GL+RV +R S D E++++ E+ RQ ++ Sbjct: 121 NDIAVAGLRPDFTIILDLDPAVGLQRVASRGSD-----FDRLEKENLSFLERARQGYIKQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A P R VD++ SF V +L +V +++ + Sbjct: 176 ALADPQRFATVDASQSFDQVRHEVLQLVEQVIARH 210 >gi|300769770|ref|ZP_07079652.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300492678|gb|EFK27864.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 225 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 5/225 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G ++FEG +GAGKT+ ++ + LQ + + VTREPGG +EA R ++L Sbjct: 5 MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EA+++AAAR H+ I+PAL +++LCDR++DSS AYQG + Sbjct: 65 TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 124 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + D T+ D+ +GL R+Q ++ + + + H + + +L Sbjct: 125 MNQFATAGLTADLTLYFDVDAAVGLNRIQQ----HRQNEINRLDVEALSFHHRVQAAYLR 180 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + + PDR VD++ V T L I+ + V+ + Sbjct: 181 LLADHPDRIKRVDASQPLDQVVTQALEIMASQLPAYVASKGGEDQ 225 >gi|148543567|ref|YP_001270937.1| thymidylate kinase [Lactobacillus reuteri DSM 20016] gi|184152974|ref|YP_001841315.1| thymidylate kinase [Lactobacillus reuteri JCM 1112] gi|227363473|ref|ZP_03847595.1| thymidylate kinase [Lactobacillus reuteri MM2-3] gi|325681917|ref|ZP_08161435.1| thymidylate kinase [Lactobacillus reuteri MM4-1A] gi|166987704|sp|A5VIC6|KTHY_LACRD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621731|sp|B2G5V3|KTHY_LACRJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148530601|gb|ABQ82600.1| thymidylate kinase [Lactobacillus reuteri DSM 20016] gi|183224318|dbj|BAG24835.1| thymidylate kinase [Lactobacillus reuteri JCM 1112] gi|227071487|gb|EEI09788.1| thymidylate kinase [Lactobacillus reuteri MM2-3] gi|324978561|gb|EGC15510.1| thymidylate kinase [Lactobacillus reuteri MM4-1A] Length = 213 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 6/209 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG +GAGKT+ I ++ L+ + V TREPGG +E R VL + Sbjct: 3 GKFISFEGPDGAGKTSVIQQIQLELEDQLGTEKVMYTREPGGNKISEQIRQVLFDGQNTD 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H+ + I P L GK++LCDRF+DSS AYQG + + Sbjct: 63 MDGRTEALLFAAARRQHIVSEIIPGLKAGKVILCDRFVDSSIAYQGAGRGLGEKEIWQIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ +MP TI LD+ +IGLKR+ S ++ + + + H RQ +L + Sbjct: 123 QFAIDGLMPALTIYLDIESEIGLKRIAE----HRSNQVNRLDEEKLEFHRTVRQSYLKLY 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +N P+R ++D++ + V ++ + + Sbjct: 179 QNYPERIELIDASQPLEKVIEDVKATIHD 207 >gi|297538533|ref|YP_003674302.1| thymidylate kinase [Methylotenera sp. 301] gi|297257880|gb|ADI29725.1| thymidylate kinase [Methylotenera sp. 301] Length = 212 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 114/217 (52%), Gaps = 5/217 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I +G GAGK+T + ++ L+ K YD +TREPGGT E R VLL Sbjct: 1 MNKGCMIVCDGGNGAGKSTVLRAIEEHLKTKQYDYVMTREPGGTVIGEKIREVLLCSDTP 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++FAAAR HV I P++ GK+++ DRF ++Y++Q + L Sbjct: 61 EMCDVTELMLFAAARAQHVREKIIPSINAGKVVVSDRFDSATYSFQHYGRGLSLALIQQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I++ D TI+LD+ GL+RV +R S LD E ++ K R +L+ Sbjct: 121 NNIALDGFKADVTIVLDIDPVKGLERVISRGSD-----LDRMEMANIEFLHKARNGYLEQ 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A+ P+R ++D++ S V ++ + +V ++ +++ Sbjct: 176 AKADPERFAVIDASQSLDVVISDAVKVVERVIARKLG 212 >gi|206972586|ref|ZP_03233529.1| thymidylate kinase [Bacillus cereus AH1134] gi|228950579|ref|ZP_04112714.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229067795|ref|ZP_04201113.1| Thymidylate kinase [Bacillus cereus F65185] gi|229077306|ref|ZP_04209987.1| Thymidylate kinase [Bacillus cereus Rock4-2] gi|229176631|ref|ZP_04304036.1| Thymidylate kinase [Bacillus cereus 172560W] gi|229188316|ref|ZP_04315365.1| Thymidylate kinase [Bacillus cereus ATCC 10876] gi|206732488|gb|EDZ49667.1| thymidylate kinase [Bacillus cereus AH1134] gi|228595115|gb|EEK52885.1| Thymidylate kinase [Bacillus cereus ATCC 10876] gi|228606798|gb|EEK64214.1| Thymidylate kinase [Bacillus cereus 172560W] gi|228705997|gb|EEL58304.1| Thymidylate kinase [Bacillus cereus Rock4-2] gi|228715279|gb|EEL67137.1| Thymidylate kinase [Bacillus cereus F65185] gi|228809054|gb|EEM55538.1| Thymidylate kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 208 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEKKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|297242601|ref|ZP_06926540.1| thymidylate kinase [Gardnerella vaginalis AMD] gi|296889410|gb|EFH28143.1| thymidylate kinase [Gardnerella vaginalis AMD] Length = 239 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 10/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFISFEGI+G GKTT + LK +LQ +V VTREPGGT + R +LL Sbjct: 33 NKGLFISFEGIDGVGKTTQVEALKDYLQSSGREVVVTREPGGTQLGKTLREILLHG--TS 90 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAA R HV VIRPAL G +++ DR++DSS AYQ + +L Sbjct: 91 VSARTEALLFAADRAQHVAQVIRPALNRGAVVITDRYIDSSLAYQAGGRELTMDDVRTLS 150 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + P+ T +LD+ + KR+ D E + + R+ FLD+A Sbjct: 151 EWATDSLWPNRTYLLDMQPEDAFKRLH--------REQDRMESAGIDFARRTREAFLDLA 202 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + DR ++D+ S +S++ I+ V L+++ Sbjct: 203 QESADRYRVLDATFSAKSLSELIVQDVHNLIEE 235 >gi|262379436|ref|ZP_06072592.1| thymidylate kinase [Acinetobacter radioresistens SH164] gi|262298893|gb|EEY86806.1| thymidylate kinase [Acinetobacter radioresistens SH164] Length = 202 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 113/208 (54%), Gaps = 8/208 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++K ++ +TREPGGT AE R +LLS DE Sbjct: 1 MFISFEGTEGVGKTTLIREIYAHYEQKGAEIILTREPGGTSLAEQIRALLLSVSHDEKMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GK +LCDRF D+S+AYQ L L + Sbjct: 61 DDTELLLMYAARAQHLQQVILPALQAGKTVLCDRFTDASFAYQCAGRGLNENKLALLNQS 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T+ LD PV++G+ R + R LD FE++ V EK R + + + Sbjct: 121 FV-SRMPDITLWLDAPVELGMSRARER------GALDRFEQEKVSFFEKVRAGYTRLWQQ 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R +D+ + + V L + +L Sbjct: 174 HPERIKRLDATQAPEKVLEQALEQIGKL 201 >gi|301051766|ref|YP_003789977.1| thymidylate kinase [Bacillus anthracis CI] gi|300373935|gb|ADK02839.1| thymidylate kinase [Bacillus cereus biovar anthracis str. CI] Length = 208 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP+ TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPNLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|295694727|ref|YP_003587965.1| thymidylate kinase [Bacillus tusciae DSM 2912] gi|295410329|gb|ADG04821.1| thymidylate kinase [Bacillus tusciae DSM 2912] Length = 209 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 4/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+FI+FEG +GAGK+T ++LL LQ+ TREPGGT ++ R +LL E Sbjct: 2 TGVFITFEGPDGAGKSTQVALLASRLQKACIRCITTREPGGTTISDKIRGILLDPHHREM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA+R V IRP L G +++CDR++D+S AYQG L L Sbjct: 62 TPRTEALLYAASRAQLVGEFIRPHLERGDVVICDRYVDASLAYQGA-LGLDRKELARLNH 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P T ++D+P D+GL RV+ R+S+ +D E + + HE R+ FL A+ Sbjct: 121 WATDGLEPLRTYLIDVPADVGLDRVRTRHSM--YGVMDRIEERSIEYHEAVRRWFLGQAQ 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R ++D + V+ I V L+ Sbjct: 179 TSP-RYRVIDGTMPPEMVSEAIWRDVKSLLN 208 >gi|84499967|ref|ZP_00998233.1| thymidylate kinase [Oceanicola batsensis HTCC2597] gi|84391901|gb|EAQ04169.1| thymidylate kinase [Oceanicola batsensis HTCC2597] Length = 217 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 6/213 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF+SFEGI+G+GK+T +L L+ + DV +TREPGG+P AE R ++L D Sbjct: 7 RRGLFLSFEGIDGSGKSTQARMLAEALRAEGRDVVLTREPGGSPGAEEIRALVLQGDPDR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A E ++F AAR DH+E IRPAL G +++CDRF DS+ YQG +D L Sbjct: 67 WSAATEILLFTAARRDHLERTIRPALDRGAVVICDRFADSTRMYQGLSRGDLRRTVDDLH 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+++D+ ++GL R + R + E FE + + R FLD+A Sbjct: 127 ALMI-GIEPDLTLLIDMDPEVGLSRAKGRQGIEE-----RFEDFGAGLQARMRTGFLDLA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R P R ++D A +VA ++L + + Sbjct: 181 REFPARFRVIDGARPEGTVAADVLTAARTALSE 213 >gi|161723306|ref|NP_246612.2| thymidylate kinase [Pasteurella multocida subsp. multocida str. Pm70] gi|14285512|sp|Q9CKE9|KTHY_PASMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 209 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 116/216 (53%), Gaps = 8/216 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EGIEGAGKTT + R L +D+ TREPGGTP AE R ++ Sbjct: 1 MTTGKFIVLEGIEGAGKTTARDSIVRALHAHGIHDIVFTREPGGTPLAEKLRQLIKHETE 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L + Sbjct: 61 EPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDMSSQAYQGGGRQLDQHLLHT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L++ + E PD T+ LD+ +GL R + R LD E++++ + RQ + + Sbjct: 121 LKQTILGEFEPDLTLYLDIDPVLGLSRAKGR------GALDRIEQQNLDFFHRTRQRYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R+ P + +D++ + VA ++ + + + R Sbjct: 175 LVRHNP-KAVTIDASQTMSKVAEDVESAIETWLTTR 209 >gi|290475848|ref|YP_003468740.1| thymidylate kinase [Xenorhabdus bovienii SS-2004] gi|289175173|emb|CBJ81976.1| thymidylate kinase [Xenorhabdus bovienii SS-2004] Length = 213 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT I + L++ D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTAIRTVVETLKQYGISDLIFTREPGGTPLAEKLRQLIKQGVE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GESLTNKAEVLMLYAARVQLVENVIKPALEKGTWVVGDRHDLSSQAYQGGGRGIDQKLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+E ++ + PD TI LDLP ++GL+R + R LD E++ + + R+ +L Sbjct: 120 SLRESALGDFYPDLTIYLDLPPEVGLQRARER------GELDRIEKESLDFFHRTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ D +D+ + V I + + ++++ Sbjct: 174 ELVAQD-DTIKKIDATQPLEKVQGAIRQTLLQWLKQQ 209 >gi|251793227|ref|YP_003007955.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700] gi|247534622|gb|ACS97868.1| thymidylate kinase [Aggregatibacter aphrophilus NJ8700] Length = 210 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T + L+ D V TREPGGTP AE RH++ + Sbjct: 3 GKFIVIEGLEGAGKSTAHQCVVDALKELGIDDVVFTREPGGTPLAEKLRHLIKHETEEPV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L SL+E Sbjct: 63 TDKAELLMLYAARIQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLDQRLLQSLKE 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ +GL R + R LD E++++ + R +L + + Sbjct: 123 TILGDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNLDFFHRTRARYLALVK 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + P + I+++ + V T+I + V Sbjct: 177 DNP-KAVIINAEQPVEQVKTDIQSAVKNW 204 >gi|75762825|ref|ZP_00742646.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218895166|ref|YP_002443577.1| thymidylate kinase [Bacillus cereus G9842] gi|228898784|ref|ZP_04063067.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] gi|228956472|ref|ZP_04118269.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228963128|ref|ZP_04124298.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|229039935|ref|ZP_04189700.1| Thymidylate kinase [Bacillus cereus AH676] gi|229148440|ref|ZP_04276697.1| Thymidylate kinase [Bacillus cereus m1550] gi|226732651|sp|B7ISU0|KTHY_BACC2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|74489692|gb|EAO53087.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218540819|gb|ACK93213.1| thymidylate kinase [Bacillus cereus G9842] gi|228634982|gb|EEK91554.1| Thymidylate kinase [Bacillus cereus m1550] gi|228727394|gb|EEL78586.1| Thymidylate kinase [Bacillus cereus AH676] gi|228796513|gb|EEM43951.1| Thymidylate kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228803162|gb|EEM49983.1| Thymidylate kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228860809|gb|EEN05186.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] Length = 208 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|241889540|ref|ZP_04776839.1| thymidylate kinase [Gemella haemolysans ATCC 10379] gi|241863847|gb|EER68230.1| thymidylate kinase [Gemella haemolysans ATCC 10379] Length = 208 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 116/214 (54%), Gaps = 7/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +G+GKT+ I+ +L+ K Y V TREPGGT +E R +L D Sbjct: 2 KGKFITVEGSDGSGKTSFINFATEYLKEKGYKVITTREPGGTEFSEKVRELLFDSSND-I 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E+++F A+R DH+ I P + +G I++CDRF+DSS AYQ + ++ Sbjct: 61 DAKTESLLFCASRRDHIVKKILPHVNDGYIVICDRFVDSSVAYQSYGRGLSKQDILNINS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ + V++GL R +NR + +++ + ++ ++ + D++R Sbjct: 121 YATDNLEPDLTLYFCVDVEVGLARTKNRDDN------NRMDQESLDFYKNVKRGYDDLSR 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +R ++D++ ++++V L I+ + + Sbjct: 175 ENTERIKVIDASDTYENVQKKALAILEGFLNNEL 208 >gi|313201192|ref|YP_004039850.1| thymidylate kinase [Methylovorus sp. MP688] gi|312440508|gb|ADQ84614.1| thymidylate kinase [Methylovorus sp. MP688] Length = 201 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 9/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG++GAGK+THI + LQ + +V TREPGGT E R VLL Sbjct: 2 RGKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLH---TPM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E+++ AAR +H+ +I PAL G +L DRF D+S+AYQ + L++ Sbjct: 59 AAETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLASERIAQLEQ 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 Q + PD T++ D+PV++ ++R+ + D FER+ + R+ +LD A+ Sbjct: 119 WVQQGLQPDLTLLFDVPVEVSVQRLAA------ARTPDKFERESADFFRRIRRAYLDRAQ 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R I+DS + V + + L Sbjct: 173 QFPERFRIIDSNQPLEQVKLAVRAALSAL 201 >gi|294651029|ref|ZP_06728369.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194] gi|292823130|gb|EFF81993.1| thymidylate kinase [Acinetobacter haemolyticus ATCC 19194] Length = 199 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 8/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + ++ +++ +V +TREPGGTP AE R +LL+ +E Sbjct: 1 MFISFEGTEGVGKTTLIRKIHQYFEQQGKEVVLTREPGGTPLAEQIRSLLLAVNHEEQMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VI PAL GKI+L DRF D+S+AYQ L L + Sbjct: 61 HDTELLLIYAARAQHLQQVILPALAAGKIVLSDRFTDASFAYQCSGRGLSQEKLQLLNQT 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MP+ T LD P+++G+ R + R LD FE++ + K R + + + Sbjct: 121 FV-AKMPNITFWLDAPIELGMTRARER------GALDRFEQEKLSFFAKVRAGYETLWQA 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 +P+R +D+ + V L + Sbjct: 174 EPERIKRLDATQNADVVFGEALQYLK 199 >gi|228937333|ref|ZP_04099980.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970219|ref|ZP_04130879.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976789|ref|ZP_04137202.1| Thymidylate kinase [Bacillus thuringiensis Bt407] gi|228782885|gb|EEM31050.1| Thymidylate kinase [Bacillus thuringiensis Bt407] gi|228789454|gb|EEM37373.1| Thymidylate kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822291|gb|EEM68272.1| Thymidylate kinase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937822|gb|AEA13718.1| thymidylate kinase [Bacillus thuringiensis serovar chinensis CT-43] Length = 208 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +R +V++ + + ++ I+ + + Sbjct: 178 RFSERIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|116669282|ref|YP_830215.1| thymidylate kinase [Arthrobacter sp. FB24] gi|116609391|gb|ABK02115.1| thymidylate kinase [Arthrobacter sp. FB24] Length = 226 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 111/214 (51%), Gaps = 5/214 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFI+FEG +GAGK+T + L L + V TREPGGTP E R ++L G Sbjct: 5 NPGLFIAFEGGDGAGKSTQAAALAGALDSRGIRVLRTREPGGTPIGEKLRSLVLDHGHGH 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAA+R H + VI PAL G+I+L DR++DSS AYQG + L Sbjct: 65 IDARTEALIFAASRAAHADQVILPALERGEIVLTDRYIDSSVAYQGAGRDLGTAAVRDLN 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD T++LD+ +G R A D E + H K R FLD+A Sbjct: 125 EWATSGLQPDLTVLLDVDPAVGRLR-----RTAGDAAEDRMESEADEFHAKIRTAFLDLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++P+ ++ + +A IL V L+ R Sbjct: 180 ADRPEHYLVLPAHLPVAELAGLILARVDSLIGSR 213 >gi|78187170|ref|YP_375213.1| thymidylate kinase [Chlorobium luteolum DSM 273] gi|123582911|sp|Q3B3B1|KTHY_PELLD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78167072|gb|ABB24170.1| thymidylate kinase [Chlorobium luteolum DSM 273] Length = 214 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 78/214 (36%), Positives = 116/214 (54%), Gaps = 4/214 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L +L+++ +V REPGGT AE RH+LL D Sbjct: 1 MLITFEGIDGAGKSTQIQKLAAYLKQEGREVLTLREPGGTEVAEKIRHILLESRHD-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V V+RPAL EGK ++ DRF DS+ AYQG L +L IS Sbjct: 60 VGELLLFSASRAELVSEVVRPALAEGKTVILDRFFDSTTAYQGYGRGLDLNMLRTLIAIS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + SL E+ LD ER + + RQ +LDI Sbjct: 120 TGALTPDITFYLDILPEEALIRKFSEKSLPLAFENEELDRMERSGLEFYRNVRQGYLDII 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P R +++ H Q + I+ + E +++ Sbjct: 180 EAEPGRFKSINARHGVQEIHAIIVKTLNERFKEQ 213 >gi|221639987|ref|YP_002526249.1| Thymidylate kinase [Rhodobacter sphaeroides KD131] gi|254808303|sp|B9KKV1|KTHY_RHOSK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221160768|gb|ACM01748.1| Thymidylate kinase [Rhodobacter sphaeroides KD131] Length = 217 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++ EGI+G+GK+ + L L + DV VTREPGGTP EA R ++L+ + + Sbjct: 4 QGFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR+ HV VI PAL +G++++ DR+ S+ AYQG F+ +L Sbjct: 64 DPMAELLLMTAARVQHVRRVIAPALAQGQVVISDRYAGSTLAYQGTGRGLSEAFIRTLHA 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ PD T++LDL IGL R + R + E+ FE D+ HE+ R FL A Sbjct: 124 EATGDLWPDLTLVLDLEAGIGLARSRRRLTG-ETLDEGRFESLDLAFHERIRAAFLAQAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D++ + + V + + + Sbjct: 183 RDPGRHAVIDASGTPEEVQARACAALTPFLAQ 214 >gi|125623282|ref|YP_001031765.1| thymidylate kinase [Lactococcus lactis subsp. cremoris MG1363] gi|166221749|sp|A2RIC4|KTHY_LACLM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12483716|gb|AAG53731.1|AF178425_1 TcsCorf1 [Lactococcus lactis subsp. cremoris MG1363] gi|124492090|emb|CAL97019.1| Tmk protein [Lactococcus lactis subsp. cremoris MG1363] gi|300070033|gb|ADJ59433.1| thymidylate kinase [Lactococcus lactis subsp. cremoris NZ9000] Length = 211 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ +V TREPGG AE R ++L E Sbjct: 2 NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++FAAAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFAAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ D+ D+ L+R+ + ++ + + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P R +D++ S + V + L ++ + Sbjct: 178 KEPGRFVKIDASQSLEKVVADTLEVLKK 205 >gi|253999090|ref|YP_003051153.1| thymidylate kinase [Methylovorus sp. SIP3-4] gi|253985769|gb|ACT50626.1| thymidylate kinase [Methylovorus sp. SIP3-4] Length = 201 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 9/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG++GAGK+THI + LQ + +V TREPGGT E R VLL Sbjct: 2 RGKFITLEGMDGAGKSTHIPDILAQLQTRGVEVISTREPGGTALGEQLREVLLH---TPM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E+++ AAR +H+ +I PAL G +L DRF D+S+AYQ + L++ Sbjct: 59 AAETESLLMFAARQEHLSTLILPALERGAYVLSDRFTDASFAYQHGGRGLAAERIAQLEQ 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 Q + PD T++ D+PV++ ++R+ + D FER+ + R+ +LD A+ Sbjct: 119 WVQQGLQPDLTLLFDVPVEVSVQRLAA------ARTPDKFERESADFFRRIRRAYLDRAQ 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R I+DS + V + + L Sbjct: 173 QFPERFRIIDSNQPLEQVKLAVRAALSTL 201 >gi|188584675|ref|YP_001916220.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179349362|gb|ACB83632.1| dTMP kinase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 206 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 116/211 (54%), Gaps = 10/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEGI+G GK+T + + L++ ++V TREPGGT +A R +LL+ Sbjct: 3 KRGKFITFEGIDGCGKSTQLKKVTSKLKKLGFNVVSTREPGGTSVGDAIREILLAPKHYN 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA+++AA+R+ H+E I P L E I+LCDRF+DSS AYQG + H + + Sbjct: 63 MTIETEALLYAASRVQHIEEFIIPNLAEDNIVLCDRFVDSSVAYQGIK--LSHEEVIRVN 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + +V PD T ++D+ + KR+ D E + V + R+ +L +A Sbjct: 121 QPAYDKVTPDITFLIDITPERAAKRL--------GIEKDRIENRGVNYQSQVRENYLFLA 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +PDR I++ S + V + N++ +++ Sbjct: 173 EEEPDRIVIINGDQSEEKVFEELWNVLEDIL 203 >gi|28377570|ref|NP_784462.1| thymidylate kinase [Lactobacillus plantarum WCFS1] gi|254555748|ref|YP_003062165.1| thymidylate kinase [Lactobacillus plantarum JDM1] gi|308179722|ref|YP_003923850.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ST-III] gi|38258053|sp|Q88YP6|KTHY_LACPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28270402|emb|CAD63305.1| thymidylate kinase [Lactobacillus plantarum WCFS1] gi|254044675|gb|ACT61468.1| thymidylate kinase [Lactobacillus plantarum JDM1] gi|308045213|gb|ADN97756.1| thymidylate kinase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 221 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 109/213 (51%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M +G ++FEG +GAGKT+ ++ + LQ + + VTREPGG +EA R ++L Sbjct: 1 MLTGKLVTFEGPDGAGKTSALNAIVAKLQPQLGDRLVVTREPGGNQISEAIRKIILDRHN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EA+++AAAR H+ I+PAL +++LCDR++DSS AYQG + Sbjct: 61 TAMDDRTEALLYAAARRQHIVQTIQPALQNDQLVLCDRYIDSSVAYQGAGRGIGEQAVYD 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + D T+ D+ +GL R+Q ++ + + + H + + +L Sbjct: 121 MNQFATAGLTADLTLYFDVDAAVGLNRIQQ----HRQNEINRLDVEALSFHHRVQAAYLR 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + PDR VD++ V T L I+ + Sbjct: 177 LLADHPDRIKRVDASQPLDQVVTQALEIMASQL 209 >gi|227513699|ref|ZP_03943748.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577] gi|227522511|ref|ZP_03952560.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290] gi|227083018|gb|EEI18330.1| thymidylate kinase [Lactobacillus buchneri ATCC 11577] gi|227090333|gb|EEI25645.1| thymidylate kinase [Lactobacillus hilgardii ATCC 8290] Length = 216 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 117/210 (55%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+FEG +GAGKT+ ++ + Q++ + VTREPGG +E R V+L E Sbjct: 2 TGKFITFEGPDGAGKTSVMNEVVNQFQKQLGDHLIVTREPGGNKISEQIRRVILDRKNTE 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL K++LCDR++DSS AYQG + + Sbjct: 62 MDYRTEALLYAAARRQHLVETILPALQADKLVLCDRYVDSSVAYQGAGREIGMQAVARMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++++P TI ++PV++GL R+ R+S+ +D + + H++ Q ++ + Sbjct: 122 EFATEKILPYKTIYFEIPVEVGLNRIAK---HRDSSKIDRLDVETTAFHKRVHQGYMKLI 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 DR I+D+ + V + +++ ++ Sbjct: 179 DEYNDRFIIIDATQPIEKVIQDTTDVIHQI 208 >gi|1730073|sp|P44719|KTHY_HAEIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1573430|gb|AAC22114.1| thymidylate kinase [Haemophilus influenzae Rd KW20] Length = 210 Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 122 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAVKNW 204 >gi|323490969|ref|ZP_08096163.1| thymidylate kinase [Planococcus donghaensis MPA1U2] gi|323395325|gb|EGA88177.1| thymidylate kinase [Planococcus donghaensis MPA1U2] Length = 216 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 4/214 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG EG+GK+T + +L L K + V TREPGG AE R V+L+ Sbjct: 2 GYLINLEGGEGSGKSTVLKMLAEALTEKGFSVVCTREPGGIDIAEQIREVILNRENTAMD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++AAAR H+ I PAL G I+LCDR++DSS AYQG + ++ + Sbjct: 62 ARTEALLYAAARRQHLVEKIIPALETGSIVLCDRYIDSSLAYQGYARGLGMEEIFAINKF 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ E MPD T+ D+ +GL R++ ++ + + + H K R+ +L + Sbjct: 122 AIDEYMPDLTLYFDVNPKVGLARIEK----DAGREVNRLDVESMKFHYKVREGYLLLLSK 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P+R +V++ + V T+ L +++R S Sbjct: 178 NPERIRLVNAENELPIVFTDALETAVRFIEERQS 211 >gi|145638629|ref|ZP_01794238.1| thymidylate kinase [Haemophilus influenzae PittII] gi|145272224|gb|EDK12132.1| thymidylate kinase [Haemophilus influenzae PittII] gi|309750128|gb|ADO80112.1| Thymidylate kinase [Haemophilus influenzae R2866] Length = 219 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + + L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKYETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTAKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213 >gi|258591911|emb|CBE68216.1| thymidylate kinase [NC10 bacterium 'Dutch sediment'] Length = 243 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 110/211 (52%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F++FEG EG+GKTT + LL ++ +V T +PGGT + R +LL G Sbjct: 19 RGIFVTFEGGEGSGKTTQLKLLANRIRASGKEVIETHDPGGTAIGKEIRTLLLDPGSAPI 78 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +++ A+R V +I P L +G ++LCDRF DS+ AYQG S + L Sbjct: 79 ASTTELLLYEASRAQLVRELIAPTLRQGVVVLCDRFTDSTLAYQGFGRSLDLDLIQRLNR 138 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-------ESACLDYFERKDVMIHEKRRQ 175 + V+PD TI+ DL +IGL R + SL E AC D E + + H + R+ Sbjct: 139 CATDGVVPDLTILFDLDPEIGLTRCRRDTSLDAVTGSGAEPACWDRIEAEPLEFHRRIRE 198 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 +L +AR DR ++D+ + T + N Sbjct: 199 GYLALARENRDRMIVIDAGVGVTEIETIVWN 229 >gi|289435959|ref|YP_003465831.1| hypothetical protein lse_2598 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172203|emb|CBH28749.1| tmk [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 208 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT ++L + ++ D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + I Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREINRLDKEDISYHEKVQAGYEKI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R VD+ + + + IL + + Sbjct: 176 MAMFPERYMRVDATKTPEEITDVILADILNNLN 208 >gi|313631628|gb|EFR98875.1| thymidylate kinase [Listeria seeligeri FSL N1-067] Length = 208 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT ++L + ++ D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + I Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDISYHEKVQAGYEKI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 PDR VD+ + + + IL + + Sbjct: 176 MAMFPDRYMRVDATKTPEEITDVILADILNNLN 208 >gi|322515570|ref|ZP_08068551.1| dTMP kinase [Actinobacillus ureae ATCC 25976] gi|322118373|gb|EFX90639.1| dTMP kinase [Actinobacillus ureae ATCC 25976] Length = 208 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGKTT ++ L++ +V REPGGTP AE RH++ + Sbjct: 2 RGKFIVLEGLEGAGKTTAHQVILAQLEKAGKNVVQIREPGGTPLAEKLRHLIKHETEEAV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQG L++L+E Sbjct: 62 SDKAELLMLYAARIQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQIDRHLLETLKE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI LD+ IGL R R LD E++ + + RQ +L++ + Sbjct: 122 TVLGKFEPDLTIYLDIDPAIGLARAIGR------GELDRIEQQSLDFFYRTRQRYLELTQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 N ++ I+++ S + VA +I V + Sbjct: 176 NN-EKAVIINAEQSIEQVAADIQQAVENFLN 205 >gi|313636002|gb|EFS01921.1| thymidylate kinase [Listeria seeligeri FSL S4-171] Length = 208 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT ++L + ++ D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTMLTKKMEEAGVDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALEAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + I Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDISYHEKVQAGYEKI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R VD+ + + + IL + + Sbjct: 176 MAMFPERYMRVDATKTPEEITDVILADILNNLN 208 >gi|326772517|ref|ZP_08231801.1| dTMP kinase [Actinomyces viscosus C505] gi|326637149|gb|EGE38051.1| dTMP kinase [Actinomyces viscosus C505] Length = 269 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 76/217 (35%), Positives = 112/217 (51%), Gaps = 8/217 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEG +G GKTT I +L L + D +TREPGGT R +LL G Sbjct: 28 GLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTELGVEIRRLLLHGGH--VA 85 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R H+ +RPAL G ++L DR+LDSS AYQG S + L Sbjct: 86 PRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLSLW 145 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + ++PD T++LD D+ +R R D E++ R+ FL +A Sbjct: 146 ATEGLLPDLTVLLDGDPDLAERRTTGR------GAKDRLEQEGDAFRVALREQFLTLAEG 199 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 +P+R +VD+ VA +++ V V++ L+ Sbjct: 200 EPERFVVVDADRPVDQVADDVIEAVVAAVRRHGVRLA 236 >gi|73663583|ref|YP_302364.1| thymidylate kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|123641634|sp|Q49UZ1|KTHY_STAS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72496098|dbj|BAE19419.1| thymidylate kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 205 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 117/209 (55%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I + + L+ + Y V +TREPGG E R VLL D+ Sbjct: 4 FITFEGPEGSGKTTVIQQVAQKLENQ-YSVVLTREPGGVKTGEQIREVLLEG--DDMDDR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + P+L GK++LCDR++DSS AYQG + S+ E ++ Sbjct: 61 TEALLFAASRREHLVGKVIPSLENGKLVLCDRYIDSSLAYQGYARGIGIEEVKSINEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ V +G +R+ L+ + +++DV HEK + + I N+ Sbjct: 121 NGLYPDITIYLDVSVAVGRERI-----LKNQRNQNRLDQEDVKFHEKVVEGYKKIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R ++++ S V + + ++K Sbjct: 176 ERFIVIEADRSIDEVVNATYESISKYLEK 204 >gi|283455190|ref|YP_003359754.1| thymidylate kinase [Bifidobacterium dentium Bd1] gi|283101824|gb|ADB08930.1| thymidylate kinase [Bifidobacterium dentium Bd1] Length = 252 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 27/221 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 11 QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 70 Query: 57 -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + EA++FAA R HV VIRPAL G +++ DR+LDSS Sbjct: 71 AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 130 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 AYQ + L + ++P+ T +LD+ R+++ D E Sbjct: 131 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 182 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + R FL++AR +P+R ++D++ S + V I Sbjct: 183 SAGDDFQNRTRNAFLELARAEPERFRVIDASQSIEEVWQRI 223 >gi|119478164|ref|ZP_01618220.1| thymidylate kinase [marine gamma proteobacterium HTCC2143] gi|119448673|gb|EAW29917.1| thymidylate kinase [marine gamma proteobacterium HTCC2143] Length = 211 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 109/207 (52%), Gaps = 6/207 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG EG GK+T+I+ + L N VTREPGGTP AE R +LLS + Sbjct: 1 MFITIEGGEGVGKSTNIAYIADQLSDANITCIVTREPGGTPLAEDIRQLLLSDRDEAIAD 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ A+R H+ VI PAL G ++CDRF D++YAYQG + +L++ Sbjct: 61 NTELLLMFASRAQHIAGVIEPALARGDWVICDRFTDATYAYQGGGRGLSEAKIANLEQWV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +++ PD TI+ D P+ +G+ R R LD ER+ E R +L +A Sbjct: 121 QEDLRPDITILFDAPITVGMSRAGQR------GELDRIERERAAFFENVRNCYLMLAERH 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 DR VD++ + V ++ I+ E+ Sbjct: 175 SDRFRTVDASETLGRVQASLQPIIAEM 201 >gi|228905827|ref|ZP_04069725.1| Thymidylate kinase [Bacillus thuringiensis IBL 200] gi|228853767|gb|EEM98526.1| Thymidylate kinase [Bacillus thuringiensis IBL 200] Length = 208 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + +++ V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQRAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|300723625|ref|YP_003712930.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061] gi|297630147|emb|CBJ90784.1| thymidylate kinase [Xenorhabdus nematophila ATCC 19061] Length = 209 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 117/217 (53%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT I + L++ D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTAIQTVAETLKQYGISDLIFTREPGGTPLAEKLRQLIKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GERLTDKAEVLMIYAARVQLVENVIKPALSKGTWVVGDRHDLSSQAYQGGGRGIDQNLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ PD TI LDLP ++GL+R + R LD E++ + + R +L Sbjct: 120 SLRDSALGCFYPDLTIYLDLPPEVGLERARER------GELDRIEKESLDFFHRTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ D +D+ S + V +I + + + +Q++ Sbjct: 174 ELVAAN-DSIKKIDATQSLEKVRADIRHTLLQWLQEQ 209 >gi|329910241|ref|ZP_08275259.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480] gi|327546227|gb|EGF31265.1| Thymidylate kinase [Oxalobacteraceae bacterium IMCC9480] Length = 205 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 108/210 (51%), Gaps = 9/210 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + FI+FEGI+GAGK++H+S + L + V TREPGGTP E R VLL + Sbjct: 5 SKPKFITFEGIDGAGKSSHLSFVADLLVARGIRVTSTREPGGTPLGEQLRSVLLHQ---K 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ A+R +H+ VI PAL G ++ DRF D+++AYQG L+ L+ Sbjct: 62 MHLETEALLMFASRREHLAQVIEPALARGDWVISDRFTDATFAYQGGGRHLPVAKLEQLE 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T++ D+P+D+ R+ + LD FE++ R +L A Sbjct: 122 QWVHPHLQPDLTLLFDVPLDVARARLDA------TRSLDKFEQEQSDFFAGVRGEYLRRA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P R IVDS S V + I+ L Sbjct: 176 AQFPARFRIVDSTQSMAQVRAALTAIMASL 205 >gi|209885250|ref|YP_002289107.1| thymidylate kinase [Oligotropha carboxidovorans OM5] gi|229621734|sp|B6JEC6|KTHY_OLICO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|209873446|gb|ACI93242.1| thymidylate kinase [Oligotropha carboxidovorans OM5] Length = 228 Score = 242 bits (619), Expect = 3e-62, Method: Composition-based stats. Identities = 90/214 (42%), Positives = 126/214 (58%), Gaps = 3/214 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EG+GK+T I LL L+ + + VTREPGG+P AE RH+LLS Sbjct: 12 RGRFITFEGGEGSGKSTQIQLLAERLKGQGIETLVTREPGGSPGAEIVRHLLLSGVGKLL 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA+AE ++FAAAR DHV VI PAL +G +LCDRF DS+ AYQG F+++L Sbjct: 72 GADAETLLFAAARDDHVHQVIEPALKKGVWVLCDRFTDSTAAYQGAAGKVDAAFIEALTH 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++ PD T+ILD+PV +GL R R R A D FE++ + HE R + IA Sbjct: 132 ATIGDLEPDLTLILDVPVAVGLHRAIKR---RGKAVADRFEQESLSFHESLRDAYRKIAA 188 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P RC +VD+ +V+ I + + + Sbjct: 189 DNPKRCAVVDANADAATVSERIWETMQHRLASAL 222 >gi|88856427|ref|ZP_01131085.1| thymidylate kinase [marine actinobacterium PHSC20C1] gi|88814294|gb|EAR24158.1| thymidylate kinase [marine actinobacterium PHSC20C1] Length = 209 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 6/211 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +GAGKTT LL +L+ + V VTREPGGT R ++L D Sbjct: 3 GLFITLEGGDGAGKTTQSKLLVHWLEEAGHTVVVTREPGGTDLGVELREIVLHRRGD-MD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA R H+ V+RPAL G I++ DR++DSS AYQG + L Sbjct: 62 PRAEALIYAADRAHHIATVVRPALERGDIVVQDRYIDSSEAYQGAGRVLGAEEVRDLSLW 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q ++PD T++LDL G KR+ + + D E + H + R FL+ A Sbjct: 122 ATQSLLPDVTVLLDLDPTDGRKRLDSART-----RYDRLEAEKQEFHTRVRDAFLERAAK 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +PDR +VD+A +A I + + + Sbjct: 177 EPDRILVVDAARDVAEIAAAIRERIQNHLTQ 207 >gi|182420064|ref|ZP_02951298.1| thymidylate kinase [Clostridium butyricum 5521] gi|237666856|ref|ZP_04526841.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376101|gb|EDT73688.1| thymidylate kinase [Clostridium butyricum 5521] gi|237658055|gb|EEP55610.1| dTMP kinase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 211 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 4/209 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI FEG EG GKTT I + ++Q K+ TREPGG +E R V+L Sbjct: 1 MKKGLFIVFEGGEGTGKTTAIESIYDWIQEKDLKCIKTREPGGIKISEEIRQVILDKDNT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA+++AAAR H+ + PAL EG ++LCDRF+DSS AYQG + S+ Sbjct: 61 KMDGRTEALLYAAARRQHLVEKVIPALNEGYVVLCDRFIDSSLAYQGFARGLGIDEVMSI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ E MPD +I+ DL IGL+R+ S ++ + + + HEK R+ + + Sbjct: 121 NKFAIGEYMPDLSILFDLEPKIGLERI----STSGEREINRLDLEKIDFHEKVREGYNKV 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 R DR +++ S + V I I+ Sbjct: 177 YRENRDRIVRINAEQSKEGVLKEIKKILE 205 >gi|167836304|ref|ZP_02463187.1| thymidylate kinase [Burkholderia thailandensis MSMB43] Length = 206 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQEKLGPAGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASARRGA------ARMPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A+ P R IVDS+ + + ++ L Sbjct: 172 YLRRAQEAPHRFVIVDSSEPIPQIRKQLEGVLAAL 206 >gi|46199545|ref|YP_005212.1| thymidylate kinase [Thermus thermophilus HB27] gi|55981576|ref|YP_144873.1| thymidylate kinase [Thermus thermophilus HB8] gi|59798322|sp|Q72I89|KTHY_THET2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920831|sp|Q5SHX3|KTHY_THET8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46197171|gb|AAS81585.1| probable thymidylate kinase [Thermus thermophilus HB27] gi|55772989|dbj|BAD71430.1| probable thymidylate kinase (TMP kinase) [Thermus thermophilus HB8] Length = 198 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 109/209 (52%), Gaps = 14/209 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EG++G+GKTT L FL+ + V +TREPGG R +LL E Sbjct: 3 GLFLTLEGLDGSGKTTQARRLAAFLEAQGRPVLLTREPGGG--LPEVRSLLL---TQELS 57 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++F+A R +HV VI P L GK+++ DR+LDSS AYQG +L + Sbjct: 58 PEAEYLLFSADRAEHVRKVILPGLAAGKVVISDRYLDSSLAYQGYGRGLPLPWLREVARE 117 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + P T +LDLP + L+RV+ D E + + R+ +L +AR Sbjct: 118 ATRGLKPRLTFLLDLPPEAALRRVR---------RPDRLEGLGLEFFRRVREGYLALARA 168 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R ++D+ + +A I + L+ Sbjct: 169 EPGRFVVLDATLPEEEIARAIQAHLRPLL 197 >gi|16801901|ref|NP_472169.1| thymidylate kinase [Listeria innocua Clip11262] gi|23821794|sp|Q927E8|KTHY_LISIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|16415376|emb|CAC98067.1| lin2841 [Listeria innocua Clip11262] Length = 208 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + ++ D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + I Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQNGYEKI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + PDR VD+ + + + T IL + + + Sbjct: 176 IQMFPDRFMRVDATKTPEEITTIILADILKQL 207 >gi|301169177|emb|CBW28774.1| thymidylate kinase [Haemophilus influenzae 10810] Length = 219 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 131 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEKMDLDFFHRTRASYLELV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213 >gi|188583893|ref|YP_001927338.1| dTMP kinase [Methylobacterium populi BJ001] gi|179347391|gb|ACB82803.1| dTMP kinase [Methylobacterium populi BJ001] Length = 236 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 88/203 (43%), Positives = 121/203 (59%), Gaps = 10/203 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARHVLL 55 G+FI+FEG EGAGK+T I+ L L+ + + TREPGGTP AEA R LL Sbjct: 7 RGVFITFEGGEGAGKSTQIARLAATLRDEGGGREGRGREIVTTREPGGTPRAEALRAALL 66 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 +G AEA++FAAAR+DH+EN IRPAL G I+LCDRF DS+ AYQG + Sbjct: 67 RGVAKPYGPFAEALMFAAARIDHIENRIRPALARGAIVLCDRFSDSTRAYQGAAGGLEPE 126 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + SL+ +++ ++ PD T+ILDLP + GL R Q+R D FE + + H++ R Sbjct: 127 LIASLERVTLGDLRPDLTLILDLPPEAGLARAQSRGG---GEPADRFEAEGMRFHQRLRT 183 Query: 176 IFLDIARNQPDRCHIVDSAHSFQ 198 F IA +P+RC I+D+ Sbjct: 184 AFRAIAEAEPERCRIIDADLGPD 206 >gi|319891435|ref|YP_004148310.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03] gi|317161131|gb|ADV04674.1| Thymidylate kinase [Staphylococcus pseudintermedius HKU10-03] gi|323465395|gb|ADX77548.1| thymidylate kinase [Staphylococcus pseudintermedius ED99] Length = 205 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 119/211 (56%), Gaps = 8/211 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ EG EG+GKTT + + L ++YDV TREPGG AEA R +LL + A Sbjct: 3 LFITIEGPEGSGKTTVVQAVSEQL-AQHYDVMTTREPGGVQTAEAIRQILLDG--ETMDA 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA+R +H+ + PAL +G++++CDRF+DSS AYQG + ++ + + Sbjct: 60 RTEALLFAASRREHLVAKVLPALSQGRLVICDRFIDSSLAYQGYARKIGVKEVQAINDFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD TI LD+P ++G R+++ + +++ V HE+ + + + Sbjct: 120 IEGRYPDLTIYLDIPAEVGRTRIES-----NRRAQNRLDKESVAFHERVVEGYQQLIAQD 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R ++++ S + V T L ++ + + + Sbjct: 175 PKRFAVINANQSIEQVVTAALQVILQKIDAQ 205 >gi|145628830|ref|ZP_01784630.1| thymidylate kinase [Haemophilus influenzae 22.1-21] gi|144979300|gb|EDJ88986.1| thymidylate kinase [Haemophilus influenzae 22.1-21] Length = 210 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 122 ETVLGNFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAVKNW 204 >gi|228918981|ref|ZP_04082361.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840630|gb|EEM85891.1| Thymidylate kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 208 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQLIEDKL 207 >gi|205372020|ref|ZP_03224838.1| thymidylate kinase [Bacillus coahuilensis m4-4] Length = 210 Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 4/212 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FI+ EG EGAGKTT + L LQ ++ D TREPGG AE R ++L+ Sbjct: 3 KSGYFITVEGPEGAGKTTVVKRLLERLQEESIDAVATREPGGIAIAEDIRSIILNPENTS 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ + PAL +GK+++CDRFLDSS AYQG + ++ Sbjct: 63 MDPRTEALLYAAARRQHLVEKVLPALEDGKVIICDRFLDSSLAYQGYARGLGVDEVLNIN 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E ++ MP T+ D+ + GL+R+ R RE ++ + + + H K + + + Sbjct: 123 EFAIDGCMPSLTLFFDISPEAGLERI-ARNKGRE---INRLDLEGIEFHHKVYEGYKKVI 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R +V++ V L I+ ++ Sbjct: 179 SRNKNRVQLVNADQDVHQVVEEALQIILHHIK 210 >gi|317126771|ref|YP_004093053.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522] gi|315471719|gb|ADU28322.1| thymidylate kinase [Bacillus cellulosilyticus DSM 2522] Length = 213 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 116/213 (54%), Gaps = 4/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+FI+FEG EGAGKTT + +K L+ + V +TREPGG+ AE R V+L+ E Sbjct: 2 SGVFITFEGGEGAGKTTVLKEIKDRLEASDEKVVMTREPGGSIIAEKIRDVILNPDHTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + P L +G I+LCDRF+DSS YQG + ++ Sbjct: 62 DARTEALLYAAARRQHLVEKVFPYLDKGYIVLCDRFIDSSLVYQGVARKIGIEEVLNINL 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + MP T+ D+ IGL+R+ + + +R+ + H R+ + ++ Sbjct: 122 FATGGFMPSKTLFFDIDPKIGLERIAK----HGNREFNRLDREALDFHYIVRKAYHELQG 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +PDR +VD++ S V V+++VQ + Sbjct: 178 REPDRIEMVDASLSLTEVIEAAWTKVFDIVQAK 210 >gi|254293993|ref|YP_003060016.1| thymidylate kinase [Hirschia baltica ATCC 49814] gi|254042524|gb|ACT59319.1| thymidylate kinase [Hirschia baltica ATCC 49814] Length = 211 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 82/218 (37%), Positives = 126/218 (57%), Gaps = 10/218 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GV 59 MN G F++ EG EG GK+T S L++ L + +TREPGG+ EA R+++L+ Sbjct: 1 MNLGRFVTLEGGEGVGKSTLASNLQKKLLELDIKCLLTREPGGSLGGEAIRNIVLNPPHH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ + ++F AAR DH+ENVI+PAL+ G+ ++CDRF DS+ AYQ + + Sbjct: 61 QDWSPLTQTLLFFAARCDHLENVIKPALLRGEWVICDRFTDSTRAYQAVAGGVDDHVVST 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L ++ V E PD T++LD+P+++ KR R + D FE+ HE RQ FL+ Sbjct: 121 LDQLVVNEQQPDLTLLLDMPLEVSAKRRIER-----NGPQDAFEKLPQSFHENVRQAFLE 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 IA DRC+++D+++S V L EL+ KR S Sbjct: 176 IADRYKDRCYVLDASNSVDQVTAEAL----ELICKRFS 209 >gi|281490940|ref|YP_003352920.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147] gi|281374698|gb|ADA64218.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147] Length = 211 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 114/208 (54%), Gaps = 4/208 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ ++ TREPGG AE R ++L E Sbjct: 2 NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++FAAAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ D+ D+ L+R+ + ++ + + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVV 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R +D++ + V + L+++ + Sbjct: 178 KEPERFVKIDASQPLEKVVADTLSVLKK 205 >gi|326328861|ref|ZP_08195195.1| dTMP kinase [Nocardioidaceae bacterium Broad-1] gi|325953346|gb|EGD45352.1| dTMP kinase [Nocardioidaceae bacterium Broad-1] Length = 216 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 9/214 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F+ FEG EG+GK+T LL L + + V +T EPG T + R ++LS + Sbjct: 11 GVFVCFEGGEGSGKSTQSRLLHEALTARGHRVLLTFEPGDTAVGKDVRRIVLSPETGDLD 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA + +H+E+++RPAL G++++ DR++DS AYQG L+ + Sbjct: 71 DRTEALLFAADKAEHIESMVRPALERGEVVITDRYVDSMLAYQGAGRVLDAAQLEEVARW 130 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ P T++LDL G R + R D E++ HE+ R F+ +A Sbjct: 131 ATADLRPHLTVLLDLDPTAGFTRFEER---------DRMEQESQQFHERVRSAFVALAER 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 PD ++D+ + + +L + L+ + V+ Sbjct: 182 NPDHYLVLDARAPVEEIHAAVLARLEPLLDQAVT 215 >gi|283783708|ref|YP_003374462.1| dTMP kinase [Gardnerella vaginalis 409-05] gi|283441867|gb|ADB14333.1| dTMP kinase [Gardnerella vaginalis 409-05] Length = 234 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 114/213 (53%), Gaps = 10/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFISFEGI+G GKTT + LK +LQ +V VTREPGGT + R +LL Sbjct: 28 NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAA R HV VIRPAL G +++ DR++DSS AYQ + +L Sbjct: 86 VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQAGGRELTMDDVRTLS 145 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + P+ T +LD+ + KR+ D E + + R+ FLD+A Sbjct: 146 EWATDSLWPNRTYLLDMQPEDAFKRLH--------REQDRMESAGIDFARRTREAFLDLA 197 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + DR ++D+ S +S+ I+ V L+++ Sbjct: 198 QESADRYRVLDATFSAKSLFELIVQDVHNLIKE 230 >gi|197284751|ref|YP_002150623.1| thymidylate kinase [Proteus mirabilis HI4320] gi|227357756|ref|ZP_03842105.1| thymidylate kinase [Proteus mirabilis ATCC 29906] gi|194682238|emb|CAR41959.1| thymidylate kinase [Proteus mirabilis HI4320] gi|227162085|gb|EEI47099.1| thymidylate kinase [Proteus mirabilis ATCC 29906] Length = 214 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 116/221 (52%), Gaps = 9/221 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M + FI EG+EGAGKT+ I + L+++ D+ TREPGGTP AE R ++ Sbjct: 1 MKNSKFIVIEGLEGAGKTSAIQTVVDTLKQQGITDLAFTREPGGTPLAEKLRELIKQGIE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG + Sbjct: 61 GEKVTDKAELLMLYAARVQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRGIDKALMK 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDL +GL R + R LD E++ + + R+ + Sbjct: 121 SLRDTVLADFKPDLTLYLDLDPAVGLARARAR------GELDRIEKESMDFFYRTRERYQ 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 +A+ +D++ V +I +++ + + + S L Sbjct: 175 ALAKEDAS-IITIDASQDIDKVQADIRDVLNQWLTQENSAL 214 >gi|298252464|ref|ZP_06976259.1| thymidylate kinase [Gardnerella vaginalis 5-1] gi|297533354|gb|EFH72237.1| thymidylate kinase [Gardnerella vaginalis 5-1] Length = 234 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 114/213 (53%), Gaps = 10/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFISFEGI+G GKTT + LK +LQ +V VTREPGGT + R +LL Sbjct: 28 NKGLFISFEGIDGVGKTTQVEALKDYLQSLGREVVVTREPGGTQLGKTLREILLHG--TS 85 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAA R HV VIRPAL G +++ DR++DSS AYQ + +L Sbjct: 86 VSARTEALLFAADRAQHVAQVIRPALSRGAVVITDRYIDSSLAYQAGGRELTKDDVRTLS 145 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + P+ T +LD+ + KR+ D E + + R+ FLD+A Sbjct: 146 EWATDSLWPNRTYLLDMQPEDAFKRLH--------REQDRMESAGIDFARRTREAFLDLA 197 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + DR ++D+ S +S+ I+ V L+++ Sbjct: 198 QESADRYRVLDATFSAKSLFELIVQDVHNLIKE 230 >gi|229094752|ref|ZP_04225758.1| Thymidylate kinase [Bacillus cereus Rock3-29] gi|229113705|ref|ZP_04243141.1| Thymidylate kinase [Bacillus cereus Rock1-3] gi|228669702|gb|EEL25108.1| Thymidylate kinase [Bacillus cereus Rock1-3] gi|228688620|gb|EEL42492.1| Thymidylate kinase [Bacillus cereus Rock3-29] Length = 208 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ +IGL R++ ++ + +D+ H++ R+ +L++ Sbjct: 122 FATEDCMPSVTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLEVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|77464120|ref|YP_353624.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1] gi|126462963|ref|YP_001044077.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17029] gi|123591351|sp|Q3J0G1|KTHY_RHOS4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223108|sp|A3PLT9|KTHY_RHOS1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|77388538|gb|ABA79723.1| thymidylate kinase [Rhodobacter sphaeroides 2.4.1] gi|126104627|gb|ABN77305.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17029] Length = 217 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++ EGI+G+GK+ + L L + DV VTREPGGTP EA R ++L+ + + Sbjct: 4 QGFFLAVEGIDGSGKSGIVRSLAAHLGAEGRDVLVTREPGGTPEGEAIRGLVLAGADEAW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR+ HV VI PAL +G++++ DR+ S+ AYQG F+ +L Sbjct: 64 DPMAELLLMTAARVQHVRRVIAPALAQGRVVISDRYAGSTLAYQGTGRGLSEAFIRTLHA 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ PD T++LDL IGL R + R + E+ FE D+ HE+ R FL A Sbjct: 124 EATGDLWPDLTLVLDLEAGIGLARSRRRLTG-ETLDEGRFESLDLAFHERIRAAFLAQAA 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R ++D++ + + V + + + Sbjct: 183 RDPGRHAVIDASGTPEEVQARACAALAPFLAQ 214 >gi|229027878|ref|ZP_04184033.1| Thymidylate kinase [Bacillus cereus AH1271] gi|228733392|gb|EEL84219.1| Thymidylate kinase [Bacillus cereus AH1271] Length = 208 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ +IGL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +VD+ + + ++ I+ + + Sbjct: 178 RFSDRIVLVDADQPMEKLIEEVVQIIEDKL 207 >gi|30018302|ref|NP_829933.1| thymidylate kinase [Bacillus cereus ATCC 14579] gi|229125548|ref|ZP_04254581.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4] gi|229142836|ref|ZP_04271279.1| Thymidylate kinase [Bacillus cereus BDRD-ST24] gi|296500863|ref|YP_003662563.1| thymidylate kinase [Bacillus thuringiensis BMB171] gi|46576501|sp|Q81JB5|KTHY_BACCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|29893842|gb|AAP07134.1| Thymidylate kinase [Bacillus cereus ATCC 14579] gi|228640599|gb|EEK96986.1| Thymidylate kinase [Bacillus cereus BDRD-ST24] gi|228657865|gb|EEL13670.1| Thymidylate kinase [Bacillus cereus BDRD-Cer4] gi|296321915|gb|ADH04843.1| thymidylate kinase [Bacillus thuringiensis BMB171] Length = 208 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKIFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|218231073|ref|YP_002364880.1| thymidylate kinase [Bacillus cereus B4264] gi|226732652|sp|B7HIJ8|KTHY_BACC4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218159030|gb|ACK59022.1| dTMP kinase [Bacillus cereus B4264] Length = 208 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEKYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|322420736|ref|YP_004199959.1| thymidylate kinase [Geobacter sp. M18] gi|320127123|gb|ADW14683.1| thymidylate kinase [Geobacter sp. M18] Length = 223 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 4/213 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG+EG GKTT + LLK L+ V TREPGG P A+ R +LL Sbjct: 2 GFFITFEGVEGCGKTTQLRLLKERLESAGEQVVATREPGGCPIADQMRAILLDAKNSAIT 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++AAAR HV+ VI PAL G+ +LCDRF D++ AYQG + L + Sbjct: 62 PLAELLLYAAARAQHVQEVIVPALERGETVLCDRFTDATVAYQGHGRELDLDVIRQLNAL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V P T+++D PV+IGL R +R A + FE + V HE+ R +L +A+ Sbjct: 122 ATGGVEPAVTVLIDCPVEIGLSRALSRIEATSGAREERFELESVRFHERVRAGYLSLAKA 181 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 P R +VD + +V ++ R+ Sbjct: 182 FPRRFVVVDGSGDV----AKTEKLVTAALKDRL 210 >gi|116874058|ref|YP_850839.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458754|sp|A0AM28|KTHY_LISW6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116742936|emb|CAK22060.1| thymidylate kinase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 208 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 118/212 (55%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + ++ D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMEEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + I Sbjct: 120 NLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDISYHEKVQAGYEKI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + PDR VD+ + + IL + + + Sbjct: 176 IKMFPDRFMRVDATMQPEEITEVILADILQQL 207 >gi|255023366|ref|ZP_05295352.1| thymidylate kinase [Listeria monocytogenes FSL J1-208] Length = 208 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + I Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ + + + IL + + Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207 >gi|304312953|ref|YP_003812551.1| Thymidylate kinase [gamma proteobacterium HdN1] gi|301798686|emb|CBL46918.1| Thymidylate kinase [gamma proteobacterium HdN1] Length = 216 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I+ EG EG GK+T++ ++ L + TREPGGTP AE R +LL+ + Sbjct: 1 MKPGLLITLEGTEGVGKSTNLQFIRDTLSEQKIPFICTREPGGTPLAETLRELLLAPRDE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AE ++ AAR H+ +VIRPAL G ++CDRF D+++AYQG + L Sbjct: 61 PFDPLAELLIMFAARAQHIAHVIRPALERGLWVICDRFTDATFAYQGGGRGVPMNIIAQL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +E+ PD I+LD+ +GL+R R A D FER+ E+ R ++L+ Sbjct: 121 EALVQRELRPDAVILLDISPQLGLERAGQR------AAPDRFERERCEFFERVRSVYLER 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R + VD++ V + +I+ + Sbjct: 175 ADADPARYYRVDASRPLVDVQQELKDILARI 205 >gi|116511255|ref|YP_808471.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11] gi|122940342|sp|Q031S3|KTHY_LACLS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116106909|gb|ABJ72049.1| thymidylate kinase [Lactococcus lactis subsp. cremoris SK11] Length = 211 Score = 241 bits (617), Expect = 4e-62, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 113/208 (54%), Gaps = 4/208 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ +V TREPGG AE R ++L E Sbjct: 2 NGILISLEGPDGAGKTTVLQEILPEIQKMKREVVPTREPGGVRVAEEIRQIILDPKNTEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++F AAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFEAARRLHMQEKMLPALRAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ D+ D+ L+R+ + ++ + + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDIDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R +D++ S + V + L ++ + Sbjct: 178 KEPERFVKIDASQSLEKVVADTLEVLKK 205 >gi|294636822|ref|ZP_06715157.1| dTMP kinase [Edwardsiella tarda ATCC 23685] gi|291089965|gb|EFE22526.1| dTMP kinase [Edwardsiella tarda ATCC 23685] Length = 213 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 10/219 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M S FI EG+EGAGKTT ++ L+R +V TREPGGTP AE R ++ Sbjct: 1 MKS-KFIVIEGLEGAGKTTARDVVVEELRRHGVQEVVFTREPGGTPLAEQLRQLVKEGCA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG L Sbjct: 60 GETLTDRAEVLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGIDPQLLQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + PD T+ LD+P + GL R ++R LD ER+ + E+ R +L Sbjct: 120 TLRDTVLGSFKPDLTLYLDIPPEQGLARARSR------GELDRIERESLAFFERTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A +R +D++ V+ I + + ++ + Sbjct: 174 ALASQD-ERIVTLDASQPLAQVSDAIRQALQAWLARQEA 211 >gi|253989189|ref|YP_003040545.1| thymidylate kinase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780639|emb|CAQ83801.1| thymidylate kinase [Photorhabdus asymbiotica] Length = 212 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKT+ + + L++ D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTSAMKTVVELLKQHGIQDLVFTREPGGTPLAEKLRELIKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 DEPLTDKAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDKNLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+ + PD TI LDLP IGL R R LD E++ + ++ R +L Sbjct: 120 SLRNTVLGSFRPDLTIYLDLPPQIGLLRACQR------GELDRIEKESMDFFDRTRSCYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + A VD++ V +I ++ + ++++ Sbjct: 174 EFASQDKS-IVTVDASQPIDRVQADICQVLEQWLKQQ 209 >gi|15672380|ref|NP_266554.1| thymidylate kinase [Lactococcus lactis subsp. lactis Il1403] gi|14285511|sp|Q9CIG4|KTHY_LACLA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12723271|gb|AAK04496.1|AE006276_11 thymidylate kinase [Lactococcus lactis subsp. lactis Il1403] gi|326405974|gb|ADZ63045.1| thymidylate kinase [Lactococcus lactis subsp. lactis CV56] Length = 211 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 114/208 (54%), Gaps = 4/208 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ IS EG +GAGKTT + + +Q+ ++ TREPGG AE R ++L + Sbjct: 2 NGILISLEGPDGAGKTTVLKEILPEIQKMKREIVPTREPGGVRVAEEIRQIILDPKNTDI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ E ++FAAAR H++ + PAL GK+++ DRF+DSS AYQG +D L Sbjct: 62 DSKTELMLFAAARRLHMQEKMLPALQAGKVVIVDRFIDSSVAYQGYGRDLGVEVVDWLNY 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ D+ D+ L+R+ + ++ + + +H K R+ +L+I Sbjct: 122 FATDGLKPDLTLYFDVDTDVALERIMKN----RADEVNRLDLERAEMHRKVREGYLEIVV 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+R +D++ + V + L+++ + Sbjct: 178 KEPERFVKIDASQPLEKVVADTLSVLKK 205 >gi|163856816|ref|YP_001631114.1| thymidylate kinase [Bordetella petrii DSM 12804] gi|229487582|sp|A9INL0|KTHY_BORPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|163260544|emb|CAP42846.1| tmk [Bordetella petrii] Length = 207 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 109/211 (51%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG++GAGK+TH + L L+ V TREPGGTP E R ++LS + Sbjct: 4 RGRFITLEGVDGAGKSTHAAWLADALRDMGRTVVATREPGGTPLGETLRGLVLS---ESM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ AAR +H+ VI PAL G ++CDR+ D++YAYQG + L++ Sbjct: 61 TLDTETLLMFAARCEHLTQVIEPALARGDWVVCDRYTDATYAYQGGGRQLGADRIAVLEQ 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T + D+P+++ R+ ++ D FER++ E+ R +L A+ Sbjct: 121 WMRPALQPDRTWLFDVPLELARARLA------DARLPDRFEREEAAFFERTRAAYLARAQ 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P R IVDS+ V + + L + Sbjct: 175 AHPGRIRIVDSSRPVTEVRAQLHAELQALAE 205 >gi|186686536|ref|YP_001869732.1| thymidylate kinase [Nostoc punctiforme PCC 73102] gi|238691253|sp|B2IZE7|KTHY_NOSP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|186468988|gb|ACC84789.1| thymidylate kinase [Nostoc punctiforme PCC 73102] Length = 211 Score = 241 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 113/212 (53%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I FEG+EG GKT+ + L ++L+ V VTREPGGT R +LL D+ Sbjct: 2 GGKLIVFEGVEGCGKTSQMQLCSQWLESLGVSVVVTREPGGTELGLHLRRLLLEKAEDKP 61 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE E +++AA R HVE ++P L GK +LCDR+ DS+ AYQG ++ L Sbjct: 62 VAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTIAYQGYGRGLNMSLINQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ + D TI LD+ V++GL R + + LD E++ + H + +Q + ++A Sbjct: 122 YIATAGLESDLTIWLDIDVEVGLTRKRG-----DGIALDRIEQETIAFHRRVQQGYAELA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P R VD + S ++V I I+ ++ Sbjct: 177 ASYPSRIVRVDGSLSKEAVQQVIQEILRVHLK 208 >gi|227824456|ref|ZP_03989288.1| thymidylate kinase [Acidaminococcus sp. D21] gi|226904955|gb|EEH90873.1| thymidylate kinase [Acidaminococcus sp. D21] Length = 205 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 113/212 (53%), Gaps = 7/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+ EG +G+GKTT LK +L+ K +V +TREPGGT AE R + LS + Sbjct: 1 MKKGLFITLEGPDGSGKTTQAKRLKAYLETKGREVVLTREPGGTGLAETLRSLALSPEIT 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+++ AAR DHV+ VIRPAL GK+++CDRF DS+ YQG L+ L Sbjct: 61 -MSKRVESLLHVAARADHVDKVIRPALEAGKVVICDRFSDSTLIYQGILGGMDLDELERL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T ++D + L R + R D FE + ++ EK RQ +L + Sbjct: 120 SLFGSKGLSPDVTFLIDGNPRVLLSRREAR------GVTDKFEAQGLLFQEKIRQGYLTL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R ++D + SV ++ V + + Sbjct: 174 LDRYPERMILIDGEGTPDSVTDALIKKVEKFL 205 >gi|262276042|ref|ZP_06053851.1| thymidylate kinase [Grimontia hollisae CIP 101886] gi|262219850|gb|EEY71166.1| thymidylate kinase [Grimontia hollisae CIP 101886] Length = 211 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EG+EGAGKTT I + L+ + + TREPGGTP AE R ++ Sbjct: 1 MKNGKFIVVEGLEGAGKTTAIRNVIDILKAQGIAHIETTREPGGTPLAEQMRTLVKEGHP 60 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE AE ++ AAR+ V+NVI+PAL +G ++ DR SS AYQG + Sbjct: 61 DEPLTDMAELLLLYAARIQLVDNVIKPALAKGAYVVGDRHDMSSQAYQGGGRGFDKALMQ 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + + PD T+ LDL IGL+R + R LD E+ ++ + R +L Sbjct: 121 NLRDTVLGDFRPDFTLYLDLDPAIGLERARAR------GELDRIEQMELDFFHRTRARYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++A N+ + I+D++ S ++V+ +I + + Sbjct: 175 ELA-NEDENVVIIDASQSIENVSADIRKALEHWLN 208 >gi|194334267|ref|YP_002016127.1| dTMP kinase [Prosthecochloris aestuarii DSM 271] gi|238693337|sp|B4S8U3|KTHY_PROA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|194312085|gb|ACF46480.1| dTMP kinase [Prosthecochloris aestuarii DSM 271] Length = 223 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 8/218 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+GAGK+T + +L++ L K +V REPGGT +E+ R +LL D Sbjct: 1 MFITFEGIDGAGKSTQVKMLRKLLISKGLEVLTLREPGGTDISESIRDILLEVKND-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++FAA+R + V+ VI+PAL + +L DRF DS+ AYQG L + I+ Sbjct: 60 IGELLLFAASRAELVQKVIKPALSDHATVLLDRFYDSTSAYQGYGRGLDLALLHQINRIA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LDL + + R + SL E LD ER + + + R + IA Sbjct: 120 SCSLEPDITFYLDLSPEDAMIRKFSEKSLPLAFEDEELDRMERSGLEFYTRVRNGYQTIA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW----ELVQKR 215 +QP R +D+ ++ I + L+QK+ Sbjct: 180 ASQPRRVVTIDATLEPDAIHRKITETIMSRRGSLLQKK 217 >gi|269976291|ref|ZP_06183287.1| thymidylate kinase [Mobiluncus mulieris 28-1] gi|269935620|gb|EEZ92158.1| thymidylate kinase [Mobiluncus mulieris 28-1] Length = 246 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 29 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 88 Query: 61 ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ Sbjct: 89 VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 148 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L + + P+ T++LDL +I +R + + D E + + K R Sbjct: 149 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMEGEGLEFQRKVRAR 205 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F +A + +VD++ + + +A + + ++ Sbjct: 206 FRRLAEEN-ETWMVVDASLTPEEIAAQVRLRLASVL 240 >gi|226941613|ref|YP_002796687.1| thymidylate kinase [Laribacter hongkongensis HLHK9] gi|226716540|gb|ACO75678.1| KthY [Laribacter hongkongensis HLHK9] Length = 214 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 7/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EGI+GAGK+TH+ ++ +L + ++ VTREPGGTP E+ R +LL + Sbjct: 8 GLFLTLEGIDGAGKSTHVGFVRDYLTARGINLVVTREPGGTPVGESLRSLLLDVQ-SQVS 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H++ VIRPAL G +L DRF D++YA+QG + +L+ Sbjct: 67 LDTETLLMFAARQAHLDAVIRPALARGDWVLSDRFTDATYAFQGGGRGVPFARIATLENW 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 Q + PDCT + D+P+ R+Q LD FE++ H + R +L A + Sbjct: 127 VQQGLQPDCTFLFDVPLATAQARMQG------VRQLDRFEQEASDFHARVRDAYLRRAAD 180 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R ++D+ S ++ + + +L+ Sbjct: 181 EPQRFCLLDARQSIGALQALLAQELDQLL 209 >gi|325576842|ref|ZP_08147457.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392] gi|325161048|gb|EGC73166.1| dTMP kinase [Haemophilus parainfluenzae ATCC 33392] Length = 210 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK+T + + L+ D+ TREPGGTP AE RH++ + Sbjct: 2 QGKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PAL EGKI+L DR SS AYQG + +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD + LD+ GL R + R LD E++ + + RQ +L++ Sbjct: 122 NMVLGDFEPDFVLYLDIDPAEGLARARGR------GELDRIEQQGLDFFHRTRQRYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +N P + I+++ V +I + V Sbjct: 176 QNNP-KAAIINAGQPLAQVQADIQSAVKNW 204 >gi|254455158|ref|ZP_05068593.1| thymidylate kinase [Octadecabacter antarcticus 238] gi|198263568|gb|EDY87840.1| thymidylate kinase [Octadecabacter antarcticus 238] Length = 215 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 115/209 (55%), Gaps = 10/209 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEGI+G+GK+T LLK L D +TREPGG+ AE R +LL+ D + Sbjct: 14 GLFISFEGIDGSGKSTQTKLLKDRLP----DAVLTREPGGSAGAEEIRALLLTGDPDRWS 69 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E IRPAL GK ++CDRF DS+ YQG + +D+L ++ Sbjct: 70 AETEILLFTAARRDHLEKTIRPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHDV 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T I+D+ + L R R S D FE + E R FL +A+ Sbjct: 130 MI-GREPDLTFIIDMDPAVALSRGLARGS-----GEDRFEDMGLAFQETLRHGFLALAKA 183 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDRC ++D +VA I V + + Sbjct: 184 NPDRCVLIDGNRDPVAVAAEITVHVADRM 212 >gi|294083926|ref|YP_003550683.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663498|gb|ADE38599.1| thymidylate kinase [Candidatus Puniceispirillum marinum IMCC1322] Length = 214 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 120/212 (56%), Gaps = 7/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 SG+ I+FEG EG+GKTT I L ++L+ + N ++ VTREPGGT AE R +L+ D Sbjct: 2 SGILITFEGGEGSGKTTQIQSLVKWLESEFSNTELVVTREPGGTEGAELIRDLLVRGASD 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ +A+R +H++NVI PAL + KI++ DRF DS+ YQG + +L Sbjct: 62 RWQPITEALLMSASRHEHIKNVIEPALAQNKIVISDRFFDSTTIYQGIVGGVDAQAVATL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ V+PD T ++D+ +GL R NR FE K + H+K R FL + Sbjct: 122 TKLACGNVIPDLTFLMDMDAKVGLARAGNRDDDET-----RFEEKGLSFHQKVRDAFLKL 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +R IVD+ + +A I N V LV Sbjct: 177 AHMNENRFVIVDATKTTSEIADIIRNKVATLV 208 >gi|119963206|ref|YP_946682.1| thymidylate kinase [Arthrobacter aurescens TC1] gi|119950065|gb|ABM08976.1| thymidylate kinase [Arthrobacter aurescens TC1] Length = 229 Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 113/216 (52%), Gaps = 5/216 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+FEG +GAGK+T + L L+ + V TREPGGTP E R ++L G Sbjct: 5 SPGLFIAFEGGDGAGKSTQAARLSDALESQGLSVLRTREPGGTPIGEKLRSLVLDHGNGT 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H VIRPAL G +++ DR++DSS AYQG + SL Sbjct: 65 IDPRTEALMFAAARAAHASQVIRPALAGGTVVITDRYIDSSVAYQGAGRGLGAEGVLSLN 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + + PD T++LD+ G +R A D E + H R FLD+A Sbjct: 125 EWATEGLHPDLTVLLDVDPSDGRQR-----RTAGDATEDRLESEPDHFHSAIRHAFLDLA 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P ++ ++ +++A IL V L+ R+S Sbjct: 180 AAAPSSYLVLAASADIETLAAQILERVETLLGDRIS 215 >gi|257784894|ref|YP_003180111.1| thymidylate kinase [Atopobium parvulum DSM 20469] gi|257473401|gb|ACV51520.1| thymidylate kinase [Atopobium parvulum DSM 20469] Length = 219 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 7/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+ EG++G GK+T SLL+ L+ N+DV REPGGT +E R V+L+ Sbjct: 8 SQGLFITLEGVDGCGKSTQASLLREDLKALNFDVVFVREPGGTAISEQIRDVVLNPKNGA 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +++ A+R VE VIRPAL GK++LCDRF DS+YAYQ + Sbjct: 68 MCDECELLLYEASRAQLVEEVIRPALASGKVVLCDRFYDSTYAYQAAGRGLDTDLVHHAN 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T++ L + R D E + V E+ + + Sbjct: 128 RLGSCGVSPDRTLVFMLEPTVAHARATQ-------NDTDRLEAEGVAFQERVFAGYKQLL 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++P+R +D+ S V T ++ +L+ Sbjct: 181 QDEPERVKAIDADGSIDEVRTRTRQLLADLI 211 >gi|290891876|ref|ZP_06554873.1| thymidylate kinase [Listeria monocytogenes FSL J2-071] gi|290558470|gb|EFD91987.1| thymidylate kinase [Listeria monocytogenes FSL J2-071] Length = 208 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + + Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ + + + IL + + Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207 >gi|329766836|ref|ZP_08258365.1| thymidylate kinase [Gemella haemolysans M341] gi|328838562|gb|EGF88168.1| thymidylate kinase [Gemella haemolysans M341] Length = 208 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 116/214 (54%), Gaps = 7/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +G+GKT+ I+ +L RK Y V TREPGGT +E R +L D Sbjct: 2 KGKFITVEGSDGSGKTSFINFATEYLTRKGYKVITTREPGGTDFSEKVRELLFDSSND-I 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E+++F A+R DH+ I P + EG I++CDRF+DSS AYQ + + Sbjct: 61 DAKTESLLFCASRRDHIVKKILPHVNEGYIVICDRFVDSSVAYQSYGRGLSKQDILDINA 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ + V++GL R +NR + +++ + ++ ++ + D+++ Sbjct: 121 YATDNLEPDLTLYFSVDVEVGLARTKNRDDN------NRMDQESLDFYKNVKRGYDDLSK 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +R ++D++ ++++V L+I+ + + Sbjct: 175 ENTERIKVIDASDTYENVQKQALSILEGFLDNEL 208 >gi|222152173|ref|YP_002561333.1| putative thymidylate kinase homolog [Macrococcus caseolyticus JCSC5402] gi|222121302|dbj|BAH18637.1| putative thymidylate kinase homolog [Macrococcus caseolyticus JCSC5402] Length = 204 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 114/208 (54%), Gaps = 7/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG EG+GKTT I + L + +DV TREPGG +E R +LL + Sbjct: 4 FITIEGPEGSGKTTVIKAIADHLIAR-FDVVCTREPGGIKISEDIRKILLD-EANVMDYR 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R H+ + PAL +G+I++CDRF+DSS AYQG + S+ E ++ Sbjct: 62 TEALLFAASRRQHLIEKVLPALQKGEIVICDRFIDSSLAYQGYARGIGMDEIRSINEFAI 121 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T+ L + +IGL R++ S + +++ + HE+ + + +A P Sbjct: 122 EGKYPDLTLYLKVSAEIGLNRIK-----DNSRETNRLDKEAIDFHEQVVEGYDILAAQYP 176 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R I+D+ S + V + + + +L+ Sbjct: 177 ERIRIIDAEQSPEQVVSESMKWINQLLN 204 >gi|167586965|ref|ZP_02379353.1| dTMP kinase [Burkholderia ubonensis Bu] Length = 201 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 100/208 (48%), Gaps = 13/208 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ K V VTREPGGT E R +LL+ Sbjct: 1 MARGRFITFEGIDGAGKTTHLEWFCERLQDKLAGAGRQVVVTREPGGTQLGEKLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ AAR +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAARREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + +R + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVAPQVASERRGA------ARMPDKFESESDAFFARTRGE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNI 204 +L A P R IVD+ S + + Sbjct: 172 YLRRAAEAPHRFAIVDATQSIPEIRRQL 199 >gi|170023932|ref|YP_001720437.1| thymidylate kinase [Yersinia pseudotuberculosis YPIII] gi|238688405|sp|B1JI38|KTHY_YERPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169750466|gb|ACA67984.1| dTMP kinase [Yersinia pseudotuberculosis YPIII] Length = 212 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + E PD T+ LDLP +GL R + R LD E++ + E+ R +L Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A + +D++ + V+ +I + + + + Sbjct: 174 ELAASDAS-IKTIDASQPIEQVSASISQALAQWLTNQ 209 >gi|212712810|ref|ZP_03320938.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM 30120] gi|212684502|gb|EEB44030.1| hypothetical protein PROVALCAL_03907 [Providencia alcalifaciens DSM 30120] Length = 208 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58 M + FI EG+EGAGKTT I+ + L + +D+ TREPGGTP AE R ++ Sbjct: 1 MKN-QFIVIEGLEGAGKTTAINTVVETLTQAGVHDMVFTREPGGTPLAEKLRELIKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ +AE ++ AAR+ V+ VI+PAL EGK ++ DR SS AYQG + Sbjct: 60 GDKVTDKAELLMLYAARVQLVDTVIKPALAEGKWVIGDRHDLSSQAYQGGGREIDRQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+++ + P T+ LDLP ++GL+R ++R LD E++ + E+ R +L Sbjct: 120 SLRDLVLGGFKPALTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + +D++ + + V +I + + K Sbjct: 174 ELAAAD-ESILTIDASQNIEQVQADIRKTLLAWLAK 208 >gi|293605096|ref|ZP_06687488.1| dTMP kinase [Achromobacter piechaudii ATCC 43553] gi|292816499|gb|EFF75588.1| dTMP kinase [Achromobacter piechaudii ATCC 43553] Length = 207 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 10/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+ EG++GAGK+TH + FL+ +V TREPGGTP E R ++L D+ Sbjct: 3 SRGRFITLEGVDGAGKSTHTDWIADFLRSNGREVVSTREPGGTPLGEKLRALVL---TDQ 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + E ++ AAR +HV VI PAL G ++CDR+ D++YAYQG + L+ Sbjct: 60 MGLDTETLLMFAARCEHVRQVIEPALARGAWVVCDRYTDATYAYQGGGRELGAERVAVLE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD T + D+P+++ R+ ++ D FER+ E+ R + A Sbjct: 120 RWMHAG-QPDRTWLFDVPLEVARARLA------DAREPDRFEREGAAFFERTRTAYHARA 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P R HI+DS S + T + + L+ Sbjct: 173 KADPGRIHIIDSTQSIAQIRTELEAGLRALLAD 205 >gi|329925532|ref|ZP_08280406.1| dTMP kinase [Paenibacillus sp. HGF5] gi|328939815|gb|EGG36155.1| dTMP kinase [Paenibacillus sp. HGF5] Length = 234 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 114/222 (51%), Gaps = 12/222 (5%) Query: 1 MNSG--------LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52 M +G LFI+ EG +G+GKTT + L F+Q + +TREPGG AE R Sbjct: 15 MKAGYAMNNRRPLFITVEGGDGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRS 74 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 ++L A EA+++AAAR H+ + PAL +G +LCDRF+DSS YQG Sbjct: 75 IILDPEHTSMDARTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGL 134 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + S+ + ++ MPD T++ D+ IGL R+ + + +++ HEK Sbjct: 135 GMEEVWSINQFAIDTRMPDLTLLFDIEPRIGLSRIAANAE----REWNRLDMENLTFHEK 190 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R+ +L +A PDR IVD++ + V + + + + K Sbjct: 191 VREGYLLVAERNPDRIRIVDASKTPAQVEREMNRHLEDAILK 232 >gi|119509052|ref|ZP_01628203.1| Thymidylate kinase [Nodularia spumigena CCY9414] gi|119466218|gb|EAW47104.1| Thymidylate kinase [Nodularia spumigena CCY9414] Length = 207 Score = 241 bits (616), Expect = 6e-62, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 8/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDE 61 +G FI FEG+EG GKT+ + L ++LQ V VTREPGGT R +LL Sbjct: 2 AGKFIVFEGVEGCGKTSQMQLCCQWLQNLGISVVVTREPGGTELGLHLRRLLLEKVENQP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +++AA R HVE ++P L GK +LCDR+ DS+ AYQG + ++ L Sbjct: 62 IAEVTELLLYAADRSQHVEQELKPNLAAGKYILCDRYTDSTTAYQGYGRALNMSLINQLN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ + D TI LD+ V++GL R Q D E++ + H + +Q + ++A Sbjct: 122 YIATAGLESDLTIWLDVDVEVGLARKQ-------GDKFDRIEQETIDFHRRVQQGYSELA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P R VD + S +V I I+ E ++ Sbjct: 175 ASYPSRIIRVDGSLSQAAVQEIIQEILREKLE 206 >gi|194289604|ref|YP_002005511.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424] gi|254808286|sp|B3R181|KTHY_CUPTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|193223439|emb|CAQ69444.1| thymidylate kinase [Cupriavidus taiwanensis LMG 19424] Length = 203 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 11/208 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 G FI+FEGI+GAGK+THI + L+ + V TREPGGT E R +LL Sbjct: 2 RGKFITFEGIDGAGKSTHIDWVADRLRARADIAGVVTTREPGGTSLGEDLRQILLH---R 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E EA++ AAR +H+ VI PAL GK ++ DRF D+++AYQG L+ L Sbjct: 59 KMHLETEALLMFAARREHIAEVIAPALERGKWVISDRFTDATFAYQGGGRGLATERLEVL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T++ D+P++ R+ + D FE + ++ R +L Sbjct: 119 ENWVQGSLQPDLTLLFDVPLETASARLAA------ARTPDKFEAESRAFFQRTRDEYLRR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R ++D+ S + + I+ Sbjct: 173 AAQSPHRFRVIDATRSIADIRDELEKIL 200 >gi|217077269|ref|YP_002334987.1| tmk thymidylate kinase [Thermosipho africanus TCF52B] gi|226732664|sp|B7IHT2|KTHY_THEAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|217037124|gb|ACJ75646.1| tmk thymidylate kinase [Thermosipho africanus TCF52B] Length = 201 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 9/209 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T ++LL ++L+ K V REPGGT E R +LL ++ Sbjct: 1 MFIAFEGIDGSGKSTQLNLLSQYLKSKGKKVLNIREPGGTILGEKIREILLDNNLN-INK 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE VI+P L G +L DRF DSS AYQG + + +L + + Sbjct: 60 RSELLLFLASRAQLVEEVIKPHLKRGFFVLADRFSDSSIAYQGGARNIGVETVSTLNDFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +D+P I ++R++++ LD E++ + EK R +L +++ + Sbjct: 120 TDNIYPDIVFYIDIPTKIAMERLKDKN-------LDRLEKEGQIFLEKVRNTYLKLSKLR 172 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 D I+D S +V I +IV + +Q Sbjct: 173 -DNFFIIDGTKSIDNVFAEIKSIVEKHLQ 200 >gi|228989239|ref|ZP_04149232.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442] gi|228995422|ref|ZP_04155092.1| Thymidylate kinase [Bacillus mycoides Rock3-17] gi|229003036|ref|ZP_04160893.1| Thymidylate kinase [Bacillus mycoides Rock1-4] gi|228758194|gb|EEM07382.1| Thymidylate kinase [Bacillus mycoides Rock1-4] gi|228764283|gb|EEM13160.1| Thymidylate kinase [Bacillus mycoides Rock3-17] gi|228770449|gb|EEM19020.1| Thymidylate kinase [Bacillus pseudomycoides DSM 12442] Length = 208 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GK+T I+ L + ++K V TREPGG +E R +L + Sbjct: 2 KGLFVTIEGPEGSGKSTLITKLLPYFEKKEQKVIATREPGGIAISEEIRAILHNQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL + ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEKNYLVLCDRFIDSSLAYQGYARGLGIDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP+ TI LD+ + GL R++ + ++ + + + H+ R +L + Sbjct: 122 FATEDCMPNLTIYLDIEPEAGLARIEK----DANREVNRLDMESIEFHKCVRDGYLQVVD 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFLDRIVVVNADQPIEKIVEEVIQLIEDKL 207 >gi|222093800|ref|YP_002527849.1| thymidylate kinase [Bacillus cereus Q1] gi|254808278|sp|B9IZB3|KTHY_BACCQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|221237847|gb|ACM10557.1| thymidylate kinase [Bacillus cereus Q1] Length = 208 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL + ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNKDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|77165137|ref|YP_343662.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707] gi|76883451|gb|ABA58132.1| thymidylate kinase [Nitrosococcus oceani ATCC 19707] Length = 206 Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 5/206 (2%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EGIEGAGK+T + +++ LQ +V VTREPGGT E R +LLS ++ A+ E Sbjct: 2 LEGIEGAGKSTQLKFIQQLLQSTEKNVIVTREPGGTFLGEQIRELLLSPRLEGMSADTEL 61 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 ++ AAR++HV+ VI PAL GK +LCDRF +SYAYQG + L+ ++ + Sbjct: 62 LLMFAARVEHVQQVIFPALAAGKWVLCDRFTSASYAYQGGGRELPLSRIAKLESWALNCL 121 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD ++ D+PV +GL+R R LD FE++ + ++ R I+L +A+ PD+ Sbjct: 122 RPDLILLFDVPVRLGLQRATTRCQ-----QLDRFEQEKIDFFDRARTIYLSLAKKYPDQY 176 Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214 ++DS+ V I ++ +++ Sbjct: 177 RLIDSSLPLTRVQEAIQKVIMAFLEE 202 >gi|30260220|ref|NP_842597.1| thymidylate kinase [Bacillus anthracis str. Ames] gi|47525283|ref|YP_016632.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor'] gi|49183064|ref|YP_026316.1| thymidylate kinase [Bacillus anthracis str. Sterne] gi|49480017|ref|YP_034384.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52145185|ref|YP_081643.1| thymidylate kinase [Bacillus cereus E33L] gi|65317490|ref|ZP_00390449.1| COG0125: Thymidylate kinase [Bacillus anthracis str. A2012] gi|165872581|ref|ZP_02217213.1| thymidylate kinase [Bacillus anthracis str. A0488] gi|167635117|ref|ZP_02393434.1| thymidylate kinase [Bacillus anthracis str. A0442] gi|167641523|ref|ZP_02399771.1| thymidylate kinase [Bacillus anthracis str. A0193] gi|170688929|ref|ZP_02880131.1| thymidylate kinase [Bacillus anthracis str. A0465] gi|170707594|ref|ZP_02898047.1| thymidylate kinase [Bacillus anthracis str. A0389] gi|177655343|ref|ZP_02936872.1| thymidylate kinase [Bacillus anthracis str. A0174] gi|190568957|ref|ZP_03021858.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I] gi|196036358|ref|ZP_03103755.1| thymidylate kinase [Bacillus cereus W] gi|196041790|ref|ZP_03109080.1| dTMP kinase [Bacillus cereus NVH0597-99] gi|218901231|ref|YP_002449065.1| thymidylate kinase [Bacillus cereus AH820] gi|227812703|ref|YP_002812712.1| thymidylate kinase [Bacillus anthracis str. CDC 684] gi|228912770|ref|ZP_04076418.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925284|ref|ZP_04088381.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931533|ref|ZP_04094440.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943837|ref|ZP_04106223.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089163|ref|ZP_04220445.1| Thymidylate kinase [Bacillus cereus Rock3-42] gi|229119693|ref|ZP_04248955.1| Thymidylate kinase [Bacillus cereus 95/8201] gi|229603011|ref|YP_002864681.1| dTMP kinase [Bacillus anthracis str. A0248] gi|254682343|ref|ZP_05146204.1| thymidylate kinase [Bacillus anthracis str. CNEVA-9066] gi|254724171|ref|ZP_05185956.1| thymidylate kinase [Bacillus anthracis str. A1055] gi|254733566|ref|ZP_05191287.1| thymidylate kinase [Bacillus anthracis str. Western North America USA6153] gi|254744666|ref|ZP_05202345.1| thymidylate kinase [Bacillus anthracis str. Kruger B] gi|254756371|ref|ZP_05208400.1| thymidylate kinase [Bacillus anthracis str. Vollum] gi|254762427|ref|ZP_05214269.1| thymidylate kinase [Bacillus anthracis str. Australia 94] gi|300119126|ref|ZP_07056827.1| thymidylate kinase [Bacillus cereus SJ1] gi|46576505|sp|Q81W11|KTHY_BACAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59798175|sp|Q63HH8|KTHY_BACCZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59798283|sp|Q6HPY6|KTHY_BACHK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808275|sp|C3P9H5|KTHY_BACAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808276|sp|C3LJ02|KTHY_BACAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|30253541|gb|AAP24083.1| dTMP kinase [Bacillus anthracis str. Ames] gi|47500431|gb|AAT29107.1| thymidylate kinase [Bacillus anthracis str. 'Ames Ancestor'] gi|49176991|gb|AAT52367.1| thymidylate kinase [Bacillus anthracis str. Sterne] gi|49331573|gb|AAT62219.1| thymidylate kinase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51978654|gb|AAU20204.1| thymidylate kinase [Bacillus cereus E33L] gi|164711709|gb|EDR17254.1| thymidylate kinase [Bacillus anthracis str. A0488] gi|167510508|gb|EDR85906.1| thymidylate kinase [Bacillus anthracis str. A0193] gi|167529591|gb|EDR92341.1| thymidylate kinase [Bacillus anthracis str. A0442] gi|170127590|gb|EDS96464.1| thymidylate kinase [Bacillus anthracis str. A0389] gi|170667153|gb|EDT17914.1| thymidylate kinase [Bacillus anthracis str. A0465] gi|172080184|gb|EDT65277.1| thymidylate kinase [Bacillus anthracis str. A0174] gi|190559881|gb|EDV13865.1| thymidylate kinase [Bacillus anthracis Tsiankovskii-I] gi|195990988|gb|EDX54959.1| thymidylate kinase [Bacillus cereus W] gi|196027410|gb|EDX66027.1| dTMP kinase [Bacillus cereus NVH0597-99] gi|218540056|gb|ACK92454.1| thymidylate kinase [Bacillus cereus AH820] gi|227003623|gb|ACP13366.1| dTMP kinase [Bacillus anthracis str. CDC 684] gi|228663718|gb|EEL19296.1| Thymidylate kinase [Bacillus cereus 95/8201] gi|228694126|gb|EEL47807.1| Thymidylate kinase [Bacillus cereus Rock3-42] gi|228815794|gb|EEM62029.1| Thymidylate kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828085|gb|EEM73812.1| Thymidylate kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834331|gb|EEM79871.1| Thymidylate kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846830|gb|EEM91834.1| Thymidylate kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267419|gb|ACQ49056.1| dTMP kinase [Bacillus anthracis str. A0248] gi|298723448|gb|EFI64189.1| thymidylate kinase [Bacillus cereus SJ1] Length = 208 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|229170881|ref|ZP_04298484.1| Thymidylate kinase [Bacillus cereus MM3] gi|228612547|gb|EEK69766.1| Thymidylate kinase [Bacillus cereus MM3] Length = 208 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 112/210 (53%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 NGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ +IGL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|145640425|ref|ZP_01796009.1| thymidylate kinase [Haemophilus influenzae R3021] gi|145275011|gb|EDK14873.1| thymidylate kinase [Haemophilus influenzae 22.4-21] Length = 210 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 122 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 176 KDNP-KAVVINAEQSIELVQADIESAVKNW 204 >gi|229107717|ref|ZP_04237354.1| Thymidylate kinase [Bacillus cereus Rock1-15] gi|228675690|gb|EEL30897.1| Thymidylate kinase [Bacillus cereus Rock1-15] Length = 208 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKAQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R++ ++ + +D+ H+ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIEK----DAGREVNRLDMEDISFHKSVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|46908871|ref|YP_015260.1| thymidylate kinase [Listeria monocytogenes str. 4b F2365] gi|47092313|ref|ZP_00230104.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858] gi|47095500|ref|ZP_00233109.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854] gi|224499368|ref|ZP_03667717.1| thymidylate kinase [Listeria monocytogenes Finland 1988] gi|226225244|ref|YP_002759351.1| thymidylate kinase [Listeria monocytogenes Clip81459] gi|254824945|ref|ZP_05229946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194] gi|254830871|ref|ZP_05235526.1| thymidylate kinase [Listeria monocytogenes 10403S] gi|254852005|ref|ZP_05241353.1| thymidylate kinase [Listeria monocytogenes FSL R2-503] gi|254899850|ref|ZP_05259774.1| thymidylate kinase [Listeria monocytogenes J0161] gi|254912944|ref|ZP_05262956.1| thymidylate kinase [Listeria monocytogenes J2818] gi|254931036|ref|ZP_05264395.1| thymidylate kinase [Listeria monocytogenes HPB2262] gi|254937325|ref|ZP_05269022.1| thymidylate kinase [Listeria monocytogenes F6900] gi|254991884|ref|ZP_05274074.1| thymidylate kinase [Listeria monocytogenes FSL J2-064] gi|255025775|ref|ZP_05297761.1| thymidylate kinase [Listeria monocytogenes FSL J2-003] gi|255519688|ref|ZP_05386925.1| thymidylate kinase [Listeria monocytogenes FSL J1-175] gi|300763550|ref|ZP_07073548.1| thymidylate kinase [Listeria monocytogenes FSL N1-017] gi|59798313|sp|Q71W79|KTHY_LISMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|259494275|sp|C1KZP7|KTHY_LISMC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46882144|gb|AAT05437.1| thymidylate kinase [Listeria monocytogenes serotype 4b str. F2365] gi|47016110|gb|EAL07034.1| thymidylate kinase [Listeria monocytogenes str. 1/2a F6854] gi|47019292|gb|EAL10034.1| thymidylate kinase [Listeria monocytogenes str. 4b H7858] gi|225877706|emb|CAS06420.1| Putative thymidylate kinase [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605303|gb|EEW17911.1| thymidylate kinase [Listeria monocytogenes FSL R2-503] gi|258609931|gb|EEW22539.1| thymidylate kinase [Listeria monocytogenes F6900] gi|293582582|gb|EFF94614.1| thymidylate kinase [Listeria monocytogenes HPB2262] gi|293590945|gb|EFF99279.1| thymidylate kinase [Listeria monocytogenes J2818] gi|293594185|gb|EFG01946.1| thymidylate kinase [Listeria monocytogenes FSL J1-194] gi|300515827|gb|EFK42876.1| thymidylate kinase [Listeria monocytogenes FSL N1-017] gi|328468175|gb|EGF39181.1| thymidylate kinase [Listeria monocytogenes 1816] gi|328469553|gb|EGF40494.1| thymidylate kinase [Listeria monocytogenes 220] Length = 208 Score = 241 bits (615), Expect = 7e-62, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + + Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ + + + IL + + Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207 >gi|146277283|ref|YP_001167442.1| dTMP kinase [Rhodobacter sphaeroides ATCC 17025] gi|145555524|gb|ABP70137.1| thymidylate kinase [Rhodobacter sphaeroides ATCC 17025] Length = 217 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 112/211 (53%), Gaps = 1/211 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++ EGI+G+GK+ + L L+ +V VTREPGGTP EA R ++L+ + Sbjct: 4 QGGLFLAVEGIDGSGKSGIVQHLAARLRAHGREVVVTREPGGTPEGEAIRGLVLAGADEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE ++ AAR+ HV VI PAL G ++L DR+ S+ AYQG F+ +L Sbjct: 64 WDPMAELLLMTAARVQHVRRVIAPALEAGSVVLSDRYAGSTLAYQGTGRGLSESFIRALH 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ PD T+ILDL GL R + R + FE D+ HE+ RQ F A Sbjct: 124 AEATGDLWPDLTLILDLDAATGLARSRRRLTGSAIDEG-RFESLDLAFHERIRQSFRAQA 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D++ + + V L + ++ Sbjct: 183 ARDPARHAVIDASGTPEQVQARALAALEPVL 213 >gi|262375534|ref|ZP_06068767.1| thymidylate kinase [Acinetobacter lwoffii SH145] gi|262309788|gb|EEY90918.1| thymidylate kinase [Acinetobacter lwoffii SH145] Length = 199 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 110/206 (53%), Gaps = 8/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 +FISFEG EG GKTT I + + DV +TREPGGTP AE R +LL+ +E Sbjct: 1 MFISFEGTEGVGKTTLIRSIYEDFIAQGKDVILTREPGGTPMAEQIRSLLLAVNHEEAMA 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR H+ VI PAL GKI+LCDRF D+S+AYQ L L + Sbjct: 61 HDTELLLMYAARAQHLAQVILPALEAGKIVLCDRFSDASFAYQCAGRGLSETKLQLLNDH 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V MPD T L+ P+++G+ R + R LD FE++ V EK R + + + Sbjct: 121 FV-ARMPDITFWLEAPIELGMNRARER------GALDRFEQEKVTFFEKVRAGYETLWQR 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 P+R +D+ + + V L+ + Sbjct: 174 HPERIKRLDATQTPEQVFEQALSYLK 199 >gi|91977186|ref|YP_569845.1| thymidylate kinase [Rhodopseudomonas palustris BisB5] gi|91683642|gb|ABE39944.1| thymidylate kinase [Rhodopseudomonas palustris BisB5] Length = 252 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 94/213 (44%), Positives = 129/213 (60%), Gaps = 5/213 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G FI+FEG EG+GK+T I LL + L+ N VTREPGG+P AE RH+LL+ Sbjct: 11 MH-GRFITFEGGEGSGKSTQIKLLAKRLEGANLRTLVTREPGGSPGAEIVRHLLLAGVGR 69 Query: 61 EFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G AEAEA++FAAAR DHV +I+PAL G +LCDRF DS+ YQG L++ Sbjct: 70 LIGGAEAEALLFAAARDDHVRTLIQPALESGVWVLCDRFFDSTRVYQGRLGEVSPAMLNA 129 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 LQ++++ + PD T+ILD+PV+IGL R R R S D FE + + H + R + Sbjct: 130 LQDVTIGAMKPDLTVILDVPVEIGLARAAVR---RGSEAPDRFESESIDFHRRLRDAYRQ 186 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 IA +P+RC ++D+ VA I V E + Sbjct: 187 IAAAEPERCVVIDANAEPHVVAARIWLTVQERL 219 >gi|238020860|ref|ZP_04601286.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147] gi|237867840|gb|EEP68846.1| hypothetical protein GCWU000324_00755 [Kingella oralis ATCC 51147] Length = 210 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 111/204 (54%), Gaps = 7/204 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ +GI+GAGKTT +++++ + + V TREPGGTP EA R +LL+ + Sbjct: 4 KFITLDGIDGAGKTTQLNVIRDWFAAQALPVLFTREPGGTPLGEALRALLLNPAT-QVSL 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++ AAR H+E+VI PAL G ++ DRF D+++AYQG ++ L+ Sbjct: 63 HTETLLMFAARRQHLEDVILPALARGVSVVSDRFTDATFAYQGGGRGLPDGQIEILENWV 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD TI+LD+P+ + L+R++ S D FE+++ + R+ +L A Sbjct: 123 QGSLKPDLTILLDVPLAVSLQRIE------RSREKDRFEQEEADFFTRVREAYLRRAAAA 176 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 P+R +VDS V I ++ Sbjct: 177 PERYAVVDSNRDKAVVRGEIEGVL 200 >gi|159043474|ref|YP_001532268.1| dTMP kinase [Dinoroseobacter shibae DFL 12] gi|254808289|sp|A8LRW0|KTHY_DINSH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157911234|gb|ABV92667.1| dTMP kinase [Dinoroseobacter shibae DFL 12] Length = 207 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 76/205 (37%), Positives = 110/205 (53%), Gaps = 6/205 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G ISFEGI+G+GK+T L L+ D +TREPGG+P AE R +L+ D + Sbjct: 5 GRLISFEGIDGSGKSTQARRLAEHLRDTGRDPLLTREPGGSPGAEDIRRLLVEGDPDRWS 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E ++F AAR DH+E +I+PAL EG+ ++ DRF DS+ YQG +D L + Sbjct: 65 PETELLLFTAARRDHLERLIQPALAEGRDVITDRFADSTRVYQGATRGDLRALVDQLHSL 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T ++D+P ++ L R R S D FE + R FLD+AR Sbjct: 125 MI-GREPDLTFVIDMPPELALTRGLARAS-----GEDRFEEFGLPFQTALRAGFLDLARA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 PDRC ++D VA +++ + Sbjct: 179 NPDRCVVIDGNRPEAEVAADVIAHL 203 >gi|171741466|ref|ZP_02917273.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC 27678] gi|171277080|gb|EDT44741.1| hypothetical protein BIFDEN_00551 [Bifidobacterium dentium ATCC 27678] Length = 245 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 105/221 (47%), Gaps = 27/221 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 4 QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 63 Query: 57 -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + EA++FAA R HV VIRPAL G +++ DR+LDSS Sbjct: 64 AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 123 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 AYQ + L + ++P+ T +LD+ R+++ D E Sbjct: 124 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 175 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + R FL++AR +P+R ++D++ S + V I Sbjct: 176 SAGDDFQNRTRNAFLELARAEPERFRVIDASQSIEEVWQRI 216 >gi|260582278|ref|ZP_05850071.1| thymidylate kinase [Haemophilus influenzae NT127] gi|260094646|gb|EEW78541.1| thymidylate kinase [Haemophilus influenzae NT127] Length = 219 Score = 241 bits (615), Expect = 8e-62, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + + L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGDFEPDLTIYLDIDPSVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I V Sbjct: 185 KDNP-KAVMINAEQSIELVQADIERAVKNW 213 >gi|257069727|ref|YP_003155982.1| thymidylate kinase [Brachybacterium faecium DSM 4810] gi|256560545|gb|ACU86392.1| thymidylate kinase [Brachybacterium faecium DSM 4810] Length = 243 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 13/215 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYD--VHVTREPGGTPAAEAARHVLLSC 57 G+FISFEG +GAGK+T + LL L +R + + TREPGGT E+ R +LL Sbjct: 19 RRGVFISFEGGDGAGKSTQMQLLHDHLVTERSVAEDLILTTREPGGTALGESIRELLLHG 78 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++ AEA+++AA R HV V+RP L G ++L DR+LDSS AYQG + Sbjct: 79 --EDVDVRAEALLYAADRAHHVSTVVRPHLARGGLVLGDRYLDSSVAYQGAGRELDAEEI 136 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +L +V ++P TI+LD+P +R R SA D E + HE R+ F Sbjct: 137 TTLSLWAVDGLLPHRTILLDVPPQTLDER-------RGSAGRDRLESAGLEFHEAVRREF 189 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 LD+A+ P+R ++D + V +L V E++ Sbjct: 190 LDLAQADPERYAVIDGTLPPEEVHDQVLAAVGEVL 224 >gi|251789239|ref|YP_003003960.1| thymidylate kinase [Dickeya zeae Ech1591] gi|247537860|gb|ACT06481.1| thymidylate kinase [Dickeya zeae Ech1591] Length = 215 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 114/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58 MN+ FI EG+EGAGKT+ +++ L+ +DV TREPGGTP AE R ++ Sbjct: 1 MNNSKFIVIEGLEGAGKTSAHAVVVETLRSFGIHDVVFTREPGGTPLAEKLRTLIKQGVA 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVIRPAL G ++ DR SS AYQG + Sbjct: 61 GETLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDPHLMT 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LD+P ++GLKR + R LD E++ + E+ R + Sbjct: 121 SLRDTVLGDFRPDLTLYLDIPPELGLKRARQR------GELDRIEQESLAFFERTRARYQ 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A +D++ V +I + + +Q++ Sbjct: 175 QLAAADAA-IVTIDASRELAQVNADIRQALSDWLQRQ 210 >gi|307701598|ref|ZP_07638615.1| dTMP kinase [Mobiluncus mulieris FB024-16] gi|307613277|gb|EFN92529.1| dTMP kinase [Mobiluncus mulieris FB024-16] Length = 238 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 21 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 80 Query: 61 ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ Sbjct: 81 VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 140 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L + + P+ T++LDL +I +R + + D E + + K R Sbjct: 141 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMESEGLEFQRKVRAR 197 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F +A + +VD++ + + +A + + ++ Sbjct: 198 FRRLAEEN-ETWMVVDASLAPEEIAAQVRLRLASVL 232 >gi|297207416|ref|ZP_06923855.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300910375|ref|ZP_07127828.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70] gi|296887979|gb|EFH26873.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300888364|gb|EFK83551.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH70] Length = 208 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L Sbjct: 1 MNKMSAFITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + + Sbjct: 58 NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E ++ + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + + Sbjct: 118 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I N+ R V++ ++V + + + ++K Sbjct: 173 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 207 >gi|118475802|ref|YP_892953.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam] gi|196047361|ref|ZP_03114574.1| thymidylate kinase [Bacillus cereus 03BB108] gi|225862082|ref|YP_002747460.1| thymidylate kinase [Bacillus cereus 03BB102] gi|229182425|ref|ZP_04309677.1| Thymidylate kinase [Bacillus cereus BGSC 6E1] gi|166221719|sp|A0R8A3|KTHY_BACAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808277|sp|C1ES32|KTHY_BACC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118415027|gb|ABK83446.1| thymidylate kinase [Bacillus thuringiensis str. Al Hakam] gi|196021763|gb|EDX60457.1| thymidylate kinase [Bacillus cereus 03BB108] gi|225787947|gb|ACO28164.1| dTMP kinase [Bacillus cereus 03BB102] gi|228601005|gb|EEK58573.1| Thymidylate kinase [Bacillus cereus BGSC 6E1] Length = 208 Score = 240 bits (614), Expect = 8e-62, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL + ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNDDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|281413072|ref|YP_003347151.1| thymidylate kinase [Thermotoga naphthophila RKU-10] gi|281374175|gb|ADA67737.1| thymidylate kinase [Thermotoga naphthophila RKU-10] Length = 197 Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 15/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL R+L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R V I+ L EG ++L DR+ DSS AYQG + ++ L + + Sbjct: 58 KAELFLFLASRNLLVME-IKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ L R L+ FE++ E+ R+ +L +A+ Sbjct: 117 TDGLVPDLTFYIDVDVETALNR---------KGELNRFEKR--EFLERVREGYLVLAKEH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P+R ++D S + + +++ V Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVER 191 >gi|312115143|ref|YP_004012739.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100] gi|311220272|gb|ADP71640.1| thymidylate kinase [Rhodomicrobium vannielii ATCC 17100] Length = 249 Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 93/247 (37%), Positives = 126/247 (51%), Gaps = 36/247 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG EGAGKTT +L L+RK +V +TREPGGTP AEA R VLLS F Sbjct: 2 RGRFITLEGGEGAGKTTQAKVLAERLRRKGINVLLTREPGGTPRAEAIREVLLSGKAKRF 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA EA++F AAR H+E IRPAL G ++CDRF DS+ AYQG ++++ + Sbjct: 62 GALGEAVLFYAARESHLELGIRPALERGTWVICDRFSDSTRAYQGAAGGLPLSVIETIDK 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS------------------------------ 152 V + PD T+I DLP ++GLKR R Sbjct: 122 AVVGDTRPDLTLIFDLPPELGLKRAAERLRGGVVSAAVGGERAEPAAAAGGSPGAAAGSD 181 Query: 153 ------LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 L ++ D FE ++ H R FL IA+ +PDRC +VD++ + V + + Sbjct: 182 VIAPAPLVDAPASDRFETMNLTFHRSLRAEFLAIAKAEPDRCAVVDASDTPNRVEDKVWS 241 Query: 207 IVWELVQ 213 IV + Q Sbjct: 242 IVRDRFQ 248 >gi|206900865|ref|YP_002250503.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12] gi|206739968|gb|ACI19026.1| thymidylate kinase [Dictyoglomus thermophilum H-6-12] Length = 205 Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + LFI+FEGI+G+GKTT LLK +L+ K + V++TREPGGT R +LLS Sbjct: 1 MKNSLFITFEGIDGSGKTTQAILLKDYLESKGFKVYLTREPGGTEVGSKIREILLSPDFS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ A+R+++ V++ L E I++C+R+ DS+ AYQG + L + Sbjct: 61 -INPWTEVFLYLASRVENTI-VVKKKLEENYIVICERYADSTIAYQGYGRNLPLNILAEM 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ + PD T+++DL ++ L+R + D E + + + R+ +L+I Sbjct: 119 NDIATSGLKPDLTVLIDLDPELALRRKK---------TFDRIEMEGKDFYYRVREGYLEI 169 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ + +R I+ + S + + I+ + E Sbjct: 170 AKREQERFIIIPGSLSKEEIFERIVKRIKE 199 >gi|254439317|ref|ZP_05052811.1| thymidylate kinase [Octadecabacter antarcticus 307] gi|198254763|gb|EDY79077.1| thymidylate kinase [Octadecabacter antarcticus 307] Length = 223 Score = 240 bits (614), Expect = 9e-62, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 113/209 (54%), Gaps = 10/209 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEGI+G+GK+T LLK D +TREPGG+ AE R +LL+ D + Sbjct: 22 GLFISFEGIDGSGKSTQTKLLKDRFP----DAVLTREPGGSAGAEEIRALLLTGDPDRWS 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL GK ++CDRF DS+ YQG + +D+L ++ Sbjct: 78 AETEILLFTAARRDHLEKTILPALAAGKTVICDRFADSTRVYQGATRGALRGAVDTLHDV 137 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T I+D+ I L R R S D FE + E R FL +A+ Sbjct: 138 MIGR-EPDLTFIIDMDPGIALSRGLARGS-----GEDRFEDMGLAFQETLRHGFLALAKA 191 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDRC ++D +VA I V + V Sbjct: 192 NPDRCVLIDGNRDPVAVAAEIAVHVTDRV 220 >gi|329769793|ref|ZP_08261194.1| thymidylate kinase [Gemella sanguinis M325] gi|328838155|gb|EGF87773.1| thymidylate kinase [Gemella sanguinis M325] Length = 208 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 114/214 (53%), Gaps = 7/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +G+GKTT I+ L ++L+ K Y V TREPGGT +E R +L E Sbjct: 2 RGKFITVEGSDGSGKTTFINFLTQYLKDKGYKVITTREPGGTEFSEKVRELLFD-KTYEI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E+++F +R DH+ I P + +G I++CDRF+DSS AYQ + + + Sbjct: 61 DAKTESLLFCVSRRDHIIKKIIPYVEDGYIVICDRFVDSSIAYQSYGRGLSKQDIIDINK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ + V++GL R + R + + +D+ ++ + + +++ Sbjct: 121 YATDGLEPDLTLYFKVDVEVGLSRTKGRDEN------NRMDHEDLSFYKSVKHGYDELSE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +R +VD+ +++V + L IV ++ + Sbjct: 175 EYSNRIKVVDANQKYENVEKDALEIVEGFLKNEL 208 >gi|119025180|ref|YP_909025.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703] gi|154486549|ref|ZP_02027956.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis L2-32] gi|166221721|sp|A0ZZR0|KTHY_BIFAA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118764764|dbj|BAF38943.1| thymidylate kinase [Bifidobacterium adolescentis ATCC 15703] gi|154084412|gb|EDN83457.1| hypothetical protein BIFADO_00364 [Bifidobacterium adolescentis L2-32] Length = 217 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 105/211 (49%), Gaps = 15/211 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----- 57 G FISFEG++G GKTT + L+ +++ + + VTREPGGT A R +LL Sbjct: 2 QGTFISFEGVDGVGKTTQVERLRAYVESQGRECVVTREPGGTALGVAIRKMLLHGVDTGD 61 Query: 58 --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + EA++FAA R HV VI PAL G +++ DR+LDSS AYQ Sbjct: 62 ENDCADIAPRTEALLFAADRAQHVAEVILPALQRGAVVITDRYLDSSLAYQAGGRELTAA 121 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + +L + ++P+ T +LD+ R+Q+ D E + R Sbjct: 122 EIRNLSMWATNGLLPERTYLLDMDPAQSHARLQH--------AEDRMEAAGNDFQRRTRV 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 FLD+A +P+R H++D++ S + V I Sbjct: 174 AFLDLAEREPERFHVIDASQSIEDVWARIKA 204 >gi|33592905|ref|NP_880549.1| thymidylate kinase [Bordetella pertussis Tohama I] gi|33596203|ref|NP_883846.1| thymidylate kinase [Bordetella parapertussis 12822] gi|33601614|ref|NP_889174.1| thymidylate kinase [Bordetella bronchiseptica RB50] gi|46576478|sp|Q7VXD2|KTHY_BORPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576488|sp|Q7WA31|KTHY_BORPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576494|sp|Q7WJ63|KTHY_BORBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33572553|emb|CAE42133.1| thymidylate kinase [Bordetella pertussis Tohama I] gi|33573206|emb|CAE36861.1| thymidylate kinase [Bordetella parapertussis] gi|33576051|emb|CAE33130.1| thymidylate kinase [Bordetella bronchiseptica RB50] Length = 208 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 117/212 (55%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG++GAGK+TH + + + L+ V TREPGGTP E R +LLS + Sbjct: 4 RGRFITLEGVDGAGKSTHTAWMVQALRDLGLTVLATREPGGTPVGEKLRELLLS---EPM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR +HV VI PAL G+ ++CDRF D+SYAYQG + +L++ Sbjct: 61 ALETETLLMFAARCEHVREVIAPALARGEWVVCDRFTDASYAYQGGGRQLGAARVAALEQ 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ PD T + D+P+D+ R+ S LD FER++ E+ R + + AR Sbjct: 121 WVHPDLQPDRTWLFDVPLDVARARLA------RSRQLDRFEREEDAFFERTRAAYHERAR 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + R I+DS+ + V + + V ELV + Sbjct: 175 SSDGRIRIIDSSRPLEVVRAQLDSEVRELVAQ 206 >gi|217957606|ref|YP_002336148.1| thymidylate kinase [Bacillus cereus AH187] gi|228983286|ref|ZP_04143500.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229136875|ref|ZP_04265503.1| Thymidylate kinase [Bacillus cereus BDRD-ST26] gi|229153810|ref|ZP_04281941.1| Thymidylate kinase [Bacillus cereus ATCC 4342] gi|229194421|ref|ZP_04321225.1| Thymidylate kinase [Bacillus cereus m1293] gi|226732653|sp|B7HPU1|KTHY_BACC7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|217067456|gb|ACJ81706.1| thymidylate kinase [Bacillus cereus AH187] gi|228589011|gb|EEK47025.1| Thymidylate kinase [Bacillus cereus m1293] gi|228629614|gb|EEK86310.1| Thymidylate kinase [Bacillus cereus ATCC 4342] gi|228646540|gb|EEL02746.1| Thymidylate kinase [Bacillus cereus BDRD-ST26] gi|228776400|gb|EEM24752.1| Thymidylate kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 208 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|254361189|ref|ZP_04977333.1| dTMP kinase [Mannheimia haemolytica PHL213] gi|261492947|ref|ZP_05989492.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495090|ref|ZP_05991556.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE] gi|153092680|gb|EDN73729.1| dTMP kinase [Mannheimia haemolytica PHL213] gi|261309256|gb|EEY10493.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261311399|gb|EEY12557.1| dTMP kinase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 206 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 118/212 (55%), Gaps = 8/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGKTT ++ + L++ DV +TREPGGTP AE RH++ + Sbjct: 2 RGKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGTPLAEKLRHLIKHETEEA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQG L++L+ Sbjct: 62 INDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRKLDRHLLETLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LDL IGL+R + R LD E++ + + R+ +L++ Sbjct: 122 ESVLGTFEPDLTIYLDLDPVIGLERARGR------GELDRIEQQSLDFFYRTRERYLELT 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ D+ I+++ + V +I ++ ++ Sbjct: 176 QHN-DKAVIINAEQPIEQVTADIQQVIRNWLK 206 >gi|229009541|ref|ZP_04166768.1| Thymidylate kinase [Bacillus mycoides DSM 2048] gi|228751685|gb|EEM01484.1| Thymidylate kinase [Bacillus mycoides DSM 2048] Length = 208 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKKEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIGK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +R +V++ + + ++ I+ + + Sbjct: 178 RFSNRIVLVNADQPMKKLIEEVVQIIEDKL 207 >gi|319775618|ref|YP_004138106.1| thymidylate kinase [Haemophilus influenzae F3047] gi|329122334|ref|ZP_08250922.1| dTMP kinase [Haemophilus aegyptius ATCC 11116] gi|317450209|emb|CBY86425.1| thymidylate kinase [Haemophilus influenzae F3047] gi|327473895|gb|EGF19312.1| dTMP kinase [Haemophilus aegyptius ATCC 11116] Length = 219 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTAKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 185 KDNP-KAVVINAEQSIELVQADIESAVKNW 213 >gi|240950250|ref|ZP_04754530.1| thymidylate kinase [Actinobacillus minor NM305] gi|257465436|ref|ZP_05629807.1| thymidylate kinase [Actinobacillus minor 202] gi|240295251|gb|EER46050.1| thymidylate kinase [Actinobacillus minor NM305] gi|257451096|gb|EEV25139.1| thymidylate kinase [Actinobacillus minor 202] Length = 209 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 115/212 (54%), Gaps = 8/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGKTT + L+ + + TREPGGTP AE RH++ + Sbjct: 2 RGKFIVLEGLEGAGKTTAHQAILAQLEAAGIHHIVQTREPGGTPLAEKLRHLIKHDLEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PAL EGK +L DR SS AYQG L++L+ Sbjct: 62 VNDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSSQAYQGGGRQLDRQLLETLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI LD+ IGL+R + R LD E++ + + RQ +L++ Sbjct: 122 QTILGDFEPDLTIYLDIDPAIGLERARGR------GELDRIEQQSLDFFYRTRQRYLELT 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +N D+ I+++ + VA +I V ++ Sbjct: 176 QNN-DKAVIINAEQPIEKVAADIQQAVENFLK 206 >gi|68249058|ref|YP_248170.1| thymidylate kinase [Haemophilus influenzae 86-028NP] gi|68057257|gb|AAX87510.1| thymidylate kinase [Haemophilus influenzae 86-028NP] Length = 219 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + + L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+N+I+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + P + ++++ S + V +I V Sbjct: 185 KENP-KAVVINAEQSIELVQADIERAVKNW 213 >gi|329946277|ref|ZP_08293871.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386] gi|328527569|gb|EGF54564.1| dTMP kinase [Actinomyces sp. oral taxon 170 str. F0386] Length = 253 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 8/214 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFISFEG +G GKTT I +L L + D +TREPGGT R +LL G Sbjct: 10 HPGLFISFEGGDGVGKTTQIRILADLLTAADVDHVLTREPGGTGLGLEIRRLLLHGGY-- 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R H+ +RPAL G ++L DR+LDSS AYQG S + L Sbjct: 68 VAPRAEALLYAADRAHHIATRVRPALERGAVVLADRYLDSSVAYQGAARSLGPQEVRDLS 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++PD TI+LD D+ +R R D E++ R+ FL +A Sbjct: 128 LWATEGLLPDLTILLDGDPDLAEQRATGR------GAKDRLEQEGGTFRTSLRRQFLALA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P R ++D+ S VA +++ E V++ Sbjct: 182 EAEPGRFVVIDADRSVDQVADDVIGAAVEAVRRH 215 >gi|282915799|ref|ZP_06323567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139] gi|283768917|ref|ZP_06341826.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19] gi|282320290|gb|EFB50632.1| thymidylate kinase [Staphylococcus aureus subsp. aureus D139] gi|283461098|gb|EFC08184.1| dTMP kinase [Staphylococcus aureus subsp. aureus H19] Length = 210 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L Sbjct: 3 MNKMSAFITFEGPEGSGKTTVINEVYHRL-AKDYDVIMTREPGGVPTGEEIRKIVLEG-- 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + + Sbjct: 60 NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E ++ + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + + Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I N+ R V++ ++V + + + ++K Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|225026353|ref|ZP_03715545.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353] gi|224956363|gb|EEG37572.1| hypothetical protein EUBHAL_00595 [Eubacterium hallii DSM 3353] Length = 209 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 110/213 (51%), Gaps = 7/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI EG +G+GKTT I+LLK +L+ Y+ +TREPGGT E R ++L+ E Sbjct: 2 KGLFIVMEGPDGSGKTTQINLLKEYLEEAGYECLITREPGGTVIGEEIRQLILNPEHKEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++AA+R V VI PAL EGKI++ DRF+DSS YQG + ++ Sbjct: 62 SPVTEMLLYAASRAQLVHEVIGPALEEGKIVISDRFVDSSIVYQGIARKLGISTVSAVNA 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD +DL GL+R + E LD E++ + H + + + Sbjct: 122 PGIGIYRPDGIFFIDLSEAEGLRRKK------EQKNLDRMEQEGIDFHHMVSEGYRKVLS 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+ +D S ++ I N V EL++K+ Sbjct: 176 GRPEVMK-IDGGRSIDTIQKKIRNHVDELLKKK 207 >gi|18978102|ref|NP_579459.1| thymidylate kinase [Pyrococcus furiosus DSM 3638] gi|23821777|sp|Q8U071|KTHY_PYRFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|18893897|gb|AAL81854.1| thymidylate kinase (tmk) [Pyrococcus furiosus DSM 3638] Length = 210 Score = 240 bits (614), Expect = 1e-61, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 116/214 (54%), Gaps = 15/214 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M GLFI EGI+G+GKTT LL R+ + + V +T+EP T + R ++L Sbjct: 1 MKRGLFIVLEGIDGSGKTTQARLLARWFEDNGFKVVLTKEPTDTEFGKIIRKLVLEGSII 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 EAEA++FAA R +HV+ +I PAL EGK+++ DR+ SS AYQ R L L Sbjct: 61 DGGRISLEAEALLFAADRAEHVKKIIEPALREGKVVISDRYFYSSLAYQWARG----LNL 116 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L EI+ PD I+LD+P G+KR++ R S E L + EK R+ + Sbjct: 117 EWLIEINKFAPHPDIAILLDIPPREGIKRIKKRSSQTEFDKL-------FKLQEKVRENY 169 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +A+ + I+D+ S + V I++ + E+ Sbjct: 170 IKLAKMFDE-IKIIDATKSVEEVHREIISSIKEI 202 >gi|51596788|ref|YP_070979.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953] gi|153946978|ref|YP_001400560.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758] gi|186895859|ref|YP_001872971.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+] gi|59798199|sp|Q669L8|KTHY_YERPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166987710|sp|A7FH32|KTHY_YERP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238691421|sp|B2K751|KTHY_YERPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|51590070|emb|CAH21704.1| thymidylate kinase [Yersinia pseudotuberculosis IP 32953] gi|152958473|gb|ABS45934.1| thymidylate kinase [Yersinia pseudotuberculosis IP 31758] gi|186698885|gb|ACC89514.1| thymidylate kinase [Yersinia pseudotuberculosis PB1/+] Length = 212 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDTVVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + E PD T+ LDLP +GL R + R LD E++ + E+ R +L Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A + +D++ + V+ +I + + + + Sbjct: 174 ELAASDAS-IKTIDASQPIEQVSASISQALAQWLTNQ 209 >gi|163938038|ref|YP_001642922.1| thymidylate kinase [Bacillus weihenstephanensis KBAB4] gi|229131038|ref|ZP_04259951.1| Thymidylate kinase [Bacillus cereus BDRD-ST196] gi|229165020|ref|ZP_04292816.1| Thymidylate kinase [Bacillus cereus AH621] gi|229487581|sp|A9VN43|KTHY_BACWK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|163860235|gb|ABY41294.1| dTMP kinase [Bacillus weihenstephanensis KBAB4] gi|228618405|gb|EEK75434.1| Thymidylate kinase [Bacillus cereus AH621] gi|228652375|gb|EEL08299.1| Thymidylate kinase [Bacillus cereus BDRD-ST196] Length = 208 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIGK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +R +V++ + + ++ I+ + + Sbjct: 178 RFSNRIVLVNADQPMKKLIEEVVQIIEDKL 207 >gi|283784887|ref|YP_003364752.1| Thymidylate kinase [Citrobacter rodentium ICC168] gi|282948341|emb|CBG87926.1| Thymidylate kinase [Citrobacter rodentium ICC168] Length = 213 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 12/221 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ LQ+ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLQQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VIRPAL G ++ DR S+ AYQG Sbjct: 60 VGDEIICDKAEVLMFYAARVQLVETVIRPALANGAWVIGDRHDLSTQAYQGGGRGIDRHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +L++A P +D+ +V +I +V E V+++ + Sbjct: 174 YLELAAQDPG-IRTIDATQPLDAVMHSIRTVVSEWVKEQGA 213 >gi|297621242|ref|YP_003709379.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044] gi|297376543|gb|ADI38373.1| Thymidylate kinase [Waddlia chondrophila WSU 86-1044] Length = 199 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 110/206 (53%), Gaps = 9/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63 +FIS EG EG+GKTT I L +L+ K V +TREPGGT E+ R VLL F Sbjct: 2 MFISVEGGEGSGKTTLIRNLAEYLESKGDQVLITREPGGTRFGESLRKVLLDPEFPAAFN 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AE ++F AAR+ H+E VI+PAL +GK ++CDRF DS+ AYQG + ++ L Sbjct: 62 ARAEMLLFLAARVQHIEEVIQPALRKGKTVICDRFNDSTIAYQGGGRELGVVRVEQLCFE 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 PD T +LD+ + +R+ + D E++ H K R F + Sbjct: 122 VCDGFQPDKTFVLDINPETAFQRL--------NRSKDRMEKESFDFHNKVRSAFYALKDK 173 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 P+R H++++ S + V ++L + Sbjct: 174 HPNRIHLINADQSKEKVLADVLKYLQ 199 >gi|84686498|ref|ZP_01014391.1| thymidylate kinase [Maritimibacter alkaliphilus HTCC2654] gi|84665411|gb|EAQ11888.1| thymidylate kinase [Rhodobacterales bacterium HTCC2654] Length = 207 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 75/196 (38%), Positives = 110/196 (56%), Gaps = 6/196 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+FEGI+G+GK+T LL L+ + DV TREPGG+P AE R ++L D + Sbjct: 2 TGHFITFEGIDGSGKSTQARLLAEALKAEGRDVVATREPGGSPGAEEIRRLVLEGDPDRW 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E +I P+L GKI++CDRF DS+ YQG R +D L Sbjct: 62 SAETEILLFTAARRDHLERLIDPSLAAGKIVICDRFADSTRMYQGLRGPGLRKVVDDLHR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T I+D+ G R + R E FE + + R+ FL +A+ Sbjct: 122 LMIGR-EPDLTFIIDMDPTTGHARAKGRNGTEE-----RFEDFGADLQVQMREGFLALAK 175 Query: 183 NQPDRCHIVDSAHSFQ 198 +P RC ++D + + Sbjct: 176 AEPGRCVVIDGDGTPE 191 >gi|145630365|ref|ZP_01786146.1| thymidylate kinase [Haemophilus influenzae R3021] gi|144984100|gb|EDJ91537.1| thymidylate kinase [Haemophilus influenzae R3021] Length = 219 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + + L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVQVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRASYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 185 KDNP-KAVMINAEQSIELVQADIESAVKNW 213 >gi|309801867|ref|ZP_07695984.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022] gi|308221519|gb|EFO77814.1| dTMP kinase [Bifidobacterium dentium JCVIHMP022] Length = 246 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 27/221 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 5 QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 64 Query: 57 -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + EA++FAA R HV VIRPAL G +++ DR+LDSS Sbjct: 65 AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 124 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 AYQ + L + ++P+ T +LD+ R+++ D E Sbjct: 125 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 176 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + R FL++AR++P+R ++D++ S + V I Sbjct: 177 SAGDDFQNRTRNAFLELARDEPERFRVIDASQSIEEVWQRI 217 >gi|229074092|ref|ZP_04207139.1| Thymidylate kinase [Bacillus cereus Rock4-18] gi|228708986|gb|EEL61112.1| Thymidylate kinase [Bacillus cereus Rock4-18] Length = 208 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKKLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINL 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ +IGL R++ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSVTIYLDIEPEIGLARIEK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ I+ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVVQIIEDKL 207 >gi|310816869|ref|YP_003964833.1| thymidylate kinase [Ketogulonicigenium vulgare Y25] gi|308755604|gb|ADO43533.1| thymidylate kinase [Ketogulonicigenium vulgare Y25] Length = 205 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 82/207 (39%), Positives = 118/207 (57%), Gaps = 6/207 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFISFEGI+G+GK+T +L L+ + +DV +TREPGG+P AE R ++L+ D Sbjct: 1 MTCGLFISFEGIDGSGKSTQARVLADALRGRGHDVVLTREPGGSPGAEEIRRLVLTGATD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E I PAL G+I++ DRF DS+ AYQG +D+L Sbjct: 61 RWSAETETLLFTAARRDHLEKTILPALAAGQIVITDRFADSTRAYQGATRGDLRGIVDAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T ++D L R R + FE + + +K R ++LDI Sbjct: 121 HALMIGR-EPDLTFVIDADPAASLTRGLARSTDEL-----RFEEFGLPLQQKMRAVYLDI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 A QP RC ++D A + +VA IL Sbjct: 175 AHAQPQRCIVIDGAGTIDAVAARILTA 201 >gi|284048006|ref|YP_003398345.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731] gi|283952227|gb|ADB47030.1| thymidylate kinase [Acidaminococcus fermentans DSM 20731] Length = 206 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 115/213 (53%), Gaps = 8/213 (3%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GLFI+ EG +G GKTT L R+ + + +TREPGGT AE+ R ++L + Sbjct: 1 MKQKGLFITLEGPDGGGKTTQAQQLARWFRLYGRETVITREPGGTATAESIRELVLDPAL 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D E E ++ AAR DHV+ VIRPAL GK+++CDRF DS+ YQG L Sbjct: 61 D-LSPETETLLQLAARADHVDQVIRPALEAGKVVICDRFTDSTMVYQGILRDMDLAQLRK 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + + + PD T++LD +KR +NR +D FE + + ++ R +L Sbjct: 120 LNDFATRGLRPDVTLLLDGDPRELVKRRENR------GTVDKFELQGLAYQDRIRAGYLR 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A+ +P+R +VD+ + V I+ + V Sbjct: 174 LAQEEPERILVVDALREPEVVTEEIICSLERFV 206 >gi|306823747|ref|ZP_07457121.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679] gi|304552745|gb|EFM40658.1| thymidylate kinase [Bifidobacterium dentium ATCC 27679] Length = 245 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 27/221 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS------ 56 G+FISFEG++G GKTT + L+ ++ + + VTREPGGT A R +LL Sbjct: 4 QGMFISFEGVDGVGKTTQVERLRAHIEAQGRECVVTREPGGTALGVAIRGMLLHGVAAAD 63 Query: 57 -------------CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + EA++FAA R HV VIRPAL G +++ DR+LDSS Sbjct: 64 AGVPANKADGGRQPEPADIAPRTEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSL 123 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 AYQ + L + ++P+ T +LD+ R+++ D E Sbjct: 124 AYQAGGRELTLKEIRDLSLWATNGLLPERTYLLDMDPAASHARLRH--------SEDRME 175 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + R FL++AR++P+R ++D++ S + V I Sbjct: 176 SAGDDFQNRTRNAFLELARDEPERFRVIDASQSIEEVWQRI 216 >gi|261866745|ref|YP_003254667.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412077|gb|ACX81448.1| thymidylate kinase [Aggregatibacter actinomycetemcomitans D11S-1] Length = 209 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 9/209 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EG+EGAGK+T + L+ +V TREPGGTP AE RH++ +E Sbjct: 3 GKFIVIEGLEGAGKSTAHQCVVDTLKTLGIGEVISTREPGGTPLAEKLRHLIKH-ENEEP 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L SL++ Sbjct: 62 TDKAELLMLYAARVQLVENVIKPALAQGKWVVGDRHDMSSQAYQGGGRQLGKDLLSSLKQ 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ +GL R + R LD E+++ + R +L++ + Sbjct: 122 TVLSDFEPDLTLYLDIDPAVGLARARGR------GELDRIEQQNPDFFHRTRARYLELVK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + P + I+D+A + V +I + V Sbjct: 176 DNP-KAVIIDAAQPVEQVRADIQSAVKNW 203 >gi|315644344|ref|ZP_07897484.1| thymidylate kinase [Paenibacillus vortex V453] gi|315280221|gb|EFU43513.1| thymidylate kinase [Paenibacillus vortex V453] Length = 214 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 6/216 (2%) Query: 1 MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 MN LFI+ EG EG+GKTT + L F+Q + +TREPGG AE R ++L Sbjct: 1 MNNRRPLFITLEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIEIAEKIRSIILDPE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 A EA+++AAAR H+ + PAL +G +LCDRF+DSS YQG + Sbjct: 61 HTAMDARTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVW 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 S+ + ++ MPD T++ D+ IGL R+ + + +++ HEK R+ +L Sbjct: 121 SINQFAIDTRMPDLTLLFDIEPKIGLSRIAANAE----REWNRLDMENLTFHEKVREGYL 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A PDR IVD++ + V + + + + K Sbjct: 177 LVAERNPDRIRIVDASKTPAQVEREMNRHLEDAILK 212 >gi|123441946|ref|YP_001005929.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166223129|sp|A1JN89|KTHY_YERE8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122088907|emb|CAL11714.1| thymidylate kinase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 212 Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 114/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + E PD T+ LDLP IGL R + R LD E++ + E+ R+ +L Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A +D++ + V+ +I ++ + + R Sbjct: 174 ELAATDSS-IKTIDASQPLEQVSESISQVLKQWLTSR 209 >gi|152979524|ref|YP_001345153.1| thymidylate kinase [Actinobacillus succinogenes 130Z] gi|254808270|sp|A6VQH1|KTHY_ACTSZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150841247|gb|ABR75218.1| dTMP kinase [Actinobacillus succinogenes 130Z] Length = 210 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 8/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGKTT + + L+ D+ TREPGGTP AE R ++ + Sbjct: 2 KGKFIVLEGLEGAGKTTALHTVVEQLRSLGITDLVFTREPGGTPLAEKLRQLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PAL GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALAAGKWVIGDRHDLSSQAYQGGGRGLDRHFMQTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ LD+ GL R + R LD E+ + + R +L++ Sbjct: 122 DSVLGGFEPDFTLYLDIEPAEGLARARGR------GELDRIEQAGLDFFNRTRTRYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R+ P + ++++ + + V +I + V + V+ + Sbjct: 176 RDNP-KAVVINARQNIERVTADIQSAVKKFVESQ 208 >gi|93004986|ref|YP_579423.1| thymidylate kinase [Psychrobacter cryohalolentis K5] gi|92392664|gb|ABE73939.1| thymidylate kinase [Psychrobacter cryohalolentis K5] Length = 225 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 110/216 (50%), Gaps = 14/216 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEG EG GKTT I L LQ D TREPGG+P AE R +LL Sbjct: 17 TQGRFISFEGTEGVGKTTAIEQLCARLQAHGIDYLRTREPGGSPFAERLREILLDP-NTA 75 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119 + E ++ AAR DH++ VI PAL G ++CDRF DS+ AYQG + + + Sbjct: 76 INDDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDAIVRAKI 135 Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++ +Q +P+ T+ LDLPV G+ R R + D FE++ + Q Sbjct: 136 DMLIEQFVMQ--LPELTLWLDLPVLEGMARANKR------SAADRFEQQATEFFTRVHQG 187 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F +A QP+R +D++ S V+ I + E + Sbjct: 188 FSVLASEQPERIQRIDASGSANEVSARIWQTIEEKL 223 >gi|84495036|ref|ZP_00994155.1| thymidylate kinase [Janibacter sp. HTCC2649] gi|84384529|gb|EAQ00409.1| thymidylate kinase [Janibacter sp. HTCC2649] Length = 210 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLFI+FEG +GAGK+T + LL L+ +V VTR+PGGTP R ++L D Sbjct: 1 MTQGLFIAFEGGDGAGKSTQVRLLAAALESLGREVVVTRQPGGTPLGAQIRDLVLHG--D 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA++FAA + HV+ +IRPA+ G +++ DR+ DS+ AYQG + L Sbjct: 59 HVSPRAEALLFAADKAHHVDQLIRPAMDRGSVVITDRYTDSAVAYQGAGRDLGASEVHEL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q +V ++PD T+I+D+ G +R D E + H+ R FL + Sbjct: 119 QMWAVGSLVPDLTVIVDVTAQEGRRR--------RGEVHDRLESEADAFHDAIRHHFLAM 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 A+ P+R +VD + ++ + Sbjct: 171 AQGSPERYLVVDGTTPPDEIHAAVMGRLE 199 >gi|22125658|ref|NP_669081.1| thymidylate kinase [Yersinia pestis KIM 10] gi|45442039|ref|NP_993578.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001] gi|108807915|ref|YP_651831.1| thymidylate kinase [Yersinia pestis Antiqua] gi|108812186|ref|YP_647953.1| thymidylate kinase [Yersinia pestis Nepal516] gi|145599124|ref|YP_001163200.1| thymidylate kinase [Yersinia pestis Pestoides F] gi|149366521|ref|ZP_01888555.1| thymidylate kinase [Yersinia pestis CA88-4125] gi|162421207|ref|YP_001607823.1| thymidylate kinase [Yersinia pestis Angola] gi|165925614|ref|ZP_02221446.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. F1991016] gi|165940160|ref|ZP_02228692.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275] gi|166008626|ref|ZP_02229524.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001] gi|166210903|ref|ZP_02236938.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004] gi|167401793|ref|ZP_02307284.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167421799|ref|ZP_02313552.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167427086|ref|ZP_02318839.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470268|ref|ZP_02334972.1| thymidylate kinase [Yersinia pestis FV-1] gi|218928741|ref|YP_002346616.1| thymidylate kinase [Yersinia pestis CO92] gi|229841590|ref|ZP_04461748.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843706|ref|ZP_04463849.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India 195] gi|229894450|ref|ZP_04509632.1| thymidylate kinase [Yersinia pestis Pestoides A] gi|229902510|ref|ZP_04517629.1| thymidylate kinase [Yersinia pestis Nepal516] gi|270490312|ref|ZP_06207386.1| dTMP kinase [Yersinia pestis KIM D27] gi|294504194|ref|YP_003568256.1| thymidylate kinase [Yersinia pestis Z176003] gi|6016463|sp|O69169|KTHY_YERPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123072761|sp|Q1C6N6|KTHY_YERPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123073357|sp|Q1CI27|KTHY_YERPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223130|sp|A4TLR5|KTHY_YERPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687291|sp|A9R3P0|KTHY_YERPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21958570|gb|AAM85332.1|AE013779_6 thymidylate kinase [Yersinia pestis KIM 10] gi|3176887|gb|AAC18855.1| thymidylate kinase [Yersinia pestis] gi|45436902|gb|AAS62455.1| thymidylate kinase [Yersinia pestis biovar Microtus str. 91001] gi|108775834|gb|ABG18353.1| thymidylate kinase [Yersinia pestis Nepal516] gi|108779828|gb|ABG13886.1| thymidylate kinase [Yersinia pestis Antiqua] gi|115347352|emb|CAL20250.1| thymidylate kinase [Yersinia pestis CO92] gi|145210820|gb|ABP40227.1| thymidylate kinase [Yersinia pestis Pestoides F] gi|149290895|gb|EDM40970.1| thymidylate kinase [Yersinia pestis CA88-4125] gi|162354022|gb|ABX87970.1| thymidylate kinase [Yersinia pestis Angola] gi|165911906|gb|EDR30551.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. IP275] gi|165922723|gb|EDR39874.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. F1991016] gi|165993008|gb|EDR45309.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. E1979001] gi|166208083|gb|EDR52563.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. B42003004] gi|166960284|gb|EDR56305.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048898|gb|EDR60306.1| thymidylate kinase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167053930|gb|EDR63762.1| thymidylate kinase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680556|gb|EEO76653.1| thymidylate kinase [Yersinia pestis Nepal516] gi|229689314|gb|EEO81377.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. India 195] gi|229694053|gb|EEO84101.1| thymidylate kinase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703469|gb|EEO90486.1| thymidylate kinase [Yersinia pestis Pestoides A] gi|262362311|gb|ACY59032.1| thymidylate kinase [Yersinia pestis D106004] gi|270338816|gb|EFA49593.1| dTMP kinase [Yersinia pestis KIM D27] gi|294354653|gb|ADE64994.1| thymidylate kinase [Yersinia pestis Z176003] gi|320014746|gb|ADV98317.1| thymidylate kinase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 212 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTTRDTVVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + E PD T+ LDLP +GL R + R LD E++ + E+ R +L Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPAVGLARARAR------GELDRIEQESLAFFERTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A + +D++ + V+ +I + + + + Sbjct: 174 ELAASDAS-IKTIDASQPIEQVSASISQALAQWLTNQ 209 >gi|229053878|ref|ZP_04195313.1| Thymidylate kinase [Bacillus cereus AH603] gi|228721419|gb|EEL72939.1| Thymidylate kinase [Bacillus cereus AH603] Length = 208 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIKSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALEENYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIGK----DVGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +R +V++ + + ++ I+ + + Sbjct: 178 RFSNRIVLVNADQPMKKLIEEVVQIIEDKL 207 >gi|289208432|ref|YP_003460498.1| thymidylate kinase [Thioalkalivibrio sp. K90mix] gi|288944063|gb|ADC71762.1| thymidylate kinase [Thioalkalivibrio sp. K90mix] Length = 219 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 6/207 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ EGIEG+GK+T ++ + L+ + TREPGGT E R +LL + Sbjct: 10 RFVVLEGIEGSGKSTQLATVVESLRATGIEPECTREPGGTALGERLRGLLLDPDLPGMCP 69 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++ AAR H+ +VIRPAL G+ ++ DRF D+S+AYQG + L++ Sbjct: 70 EAELLLMFAARAQHLASVIRPALAAGRWVVSDRFTDASFAYQGAGRGLGAERVARLEDWV 129 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD ++LD+ GL+R R D ER+ + + R+ +L+ AR Sbjct: 130 QGDLRPDLVLLLDIDPATGLERAVQRGRR------DRIEREALEFFARVREAYLERARAY 183 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P+ ++D + + VA ++ + E Sbjct: 184 PEHYRVIDGHGTPEQVADSVRRALDEW 210 >gi|126729338|ref|ZP_01745152.1| thymidylate kinase [Sagittula stellata E-37] gi|126710328|gb|EBA09380.1| thymidylate kinase [Sagittula stellata E-37] Length = 212 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 116/214 (54%), Gaps = 8/214 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SGLF+SFEGI+G+GK+T +L L +TREPGG+P AE R ++L D Sbjct: 6 HSGLFLSFEGIDGSGKSTQARMLAERLSADGMTALLTREPGGSPGAEEIRALVLQGDPDR 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E E ++F AAR DH+E IRPAL G++++CDRF DS+ YQG +D L Sbjct: 66 WSPETELLLFTAARRDHMERTIRPALTRGEVVICDRFADSTRLYQG--RQGLRDTVDKLH 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TIILD+ + GL R + R + E FE + + + R FL ++ Sbjct: 124 NLMI-GMEPDLTIILDMDPEAGLSRAKARATAEE-----RFEDFGIALQLQMRAGFLALS 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P R ++D + VA +I V E + R Sbjct: 178 EEFPARIRVIDGNRRPEYVAADIHATVMEALDAR 211 >gi|114770996|ref|ZP_01448436.1| thymidylate kinase [alpha proteobacterium HTCC2255] gi|114548278|gb|EAU51164.1| thymidylate kinase [alpha proteobacterium HTCC2255] Length = 209 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 6/210 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEGI+G+GK+T LL L V TREPGG+ AE R +L+S D + Sbjct: 6 GLFITFEGIDGSGKSTQSQLLYDALNDLGISVIQTREPGGSIGAEIIRSLLVSGDTDRWS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I+PAL + +I++CDRF+DS+ YQG + +D L I Sbjct: 66 AETEILLFTAARRDHLEKTIQPALTKNQIVICDRFVDSTRVYQGVARADLRQTVDELHSI 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ PD T I+D + L R R S D FE + +K R F ++++ Sbjct: 126 IIKK-EPDITFIIDTDPEKSLTRGLARNS-----GEDRFEEFGLEFQKKLRNGFSELSKT 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + RCH+++ S + V+ +ILNIV + + Sbjct: 180 EKSRCHLINGMRSKEEVSNDILNIVKDYAK 209 >gi|93279032|pdb|2CCG|A Chain A, Crystal Structure Of His-Tagged S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) gi|93279033|pdb|2CCG|B Chain B, Crystal Structure Of His-Tagged S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) Length = 225 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 24 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 80 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 81 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 140 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 141 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 195 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 196 QRFKSVNADQPLENVVEDTYQTIIKYLEK 224 >gi|227876763|ref|ZP_03994872.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|227842660|gb|EEJ52860.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] Length = 246 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 29 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 88 Query: 61 ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ Sbjct: 89 VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 148 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L + + P+ T++LDL +I +R + + D E + + K R Sbjct: 149 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMEGEGLEFQRKVRAR 205 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F +A + +VD++ + + +A + + ++ Sbjct: 206 FRRLAEEN-ETWMVVDASLAPEEIAAQVRLRLASVL 240 >gi|157146204|ref|YP_001453523.1| thymidylate kinase [Citrobacter koseri ATCC BAA-895] gi|166221737|sp|A8AHX4|KTHY_CITK8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157083409|gb|ABV13087.1| hypothetical protein CKO_01960 [Citrobacter koseri ATCC BAA-895] Length = 213 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 116/216 (53%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT +++ L++ +D+ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKSVGDET 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ ++GLKR + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESLDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +D+ ++V +I V ++++ + Sbjct: 179 ASDAS-IRTIDATQPLEAVMNDIRTTVTAWIKEQGA 213 >gi|89898307|ref|YP_515417.1| thymidylate kinase [Chlamydophila felis Fe/C-56] gi|123483364|sp|Q254L6|KTHY_CHLFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|89331679|dbj|BAE81272.1| thymidylate kinase [Chlamydophila felis Fe/C-56] Length = 207 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + V TREPGG+P E R+ +L+ + Sbjct: 1 MFIVIEGCEGSGKSSLTELLKNRLITEGKSVIATREPGGSPLGEQVRNWILNPSLPGISP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F A+R H+ I PAL GKI++CDRF DS+ YQG + ++ +L Sbjct: 61 YTELFLFLASRAQHITEKIIPALESGKIVICDRFHDSTIVYQGIAEGLGKEYVTNLCHHV 120 Query: 125 VQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + +PD T +LD+PVD G+KR Q + S LD FE K ++ H K R+ FL +A Sbjct: 121 VGEKKFLPDLTCLLDIPVDTGIKRKQQQKS------LDKFEDKPLVYHNKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+ I+D ++ ++ EL Sbjct: 175 ANPENYLILDGRQPLEASLNKVMTAYTEL 203 >gi|227529519|ref|ZP_03959568.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540] gi|227350604|gb|EEJ40895.1| dTMP kinase [Lactobacillus vaginalis ATCC 49540] Length = 213 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 6/209 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +G FISFEG +GAGKT+ I+ ++ L+++ V TREPGG +E R VL Sbjct: 2 AGKFISFEGPDGAGKTSVITAIQAELEQQLGKEKVMYTREPGGNHISEQVRRVLFDEHNT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++FAAAR H+ + I PAL +GK++LCDR++DSS AYQ + + Sbjct: 62 DMDGRTEALLFAAARRQHIVSEILPALKDGKVILCDRYVDSSIAYQVAGRHLGEQKIWQI 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ ++PD TI LD+ +GL+R+ + ++ + + + H+ R+ FL + Sbjct: 122 NQYAIDGLLPDLTIYLDIESKLGLQRIAE----HRADQVNRLDEEQLSFHKTVREAFLRL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 R P+R ++D++ S V +++ + Sbjct: 178 QRENPERIKLIDASQSLPKVISDVKQTIH 206 >gi|134277826|ref|ZP_01764541.1| thymidylate kinase [Burkholderia pseudomallei 305] gi|167823760|ref|ZP_02455231.1| thymidylate kinase [Burkholderia pseudomallei 9] gi|217421693|ref|ZP_03453197.1| dTMP kinase [Burkholderia pseudomallei 576] gi|226197216|ref|ZP_03792793.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9] gi|237812640|ref|YP_002897091.1| dTMP kinase [Burkholderia pseudomallei MSHR346] gi|134251476|gb|EBA51555.1| thymidylate kinase [Burkholderia pseudomallei 305] gi|217395435|gb|EEC35453.1| dTMP kinase [Burkholderia pseudomallei 576] gi|225930595|gb|EEH26605.1| dTMP kinase [Burkholderia pseudomallei Pakistan 9] gi|237504430|gb|ACQ96748.1| dTMP kinase [Burkholderia pseudomallei MSHR346] Length = 206 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASARRGA------ARMPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVDS+ S + + ++ L Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKQLEGVLAAL 206 >gi|37526718|ref|NP_930062.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1] gi|46576411|sp|Q7N391|KTHY_PHOLL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|36786150|emb|CAE15202.1| thymidylate kinase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 212 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKT+ + + LQ+ ++ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTSAMKTIVEMLQQHGIQNLIFTREPGGTPLAEKLRGLIKQGVE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEPLTDKAEVLMLYAARVQLVENVIKPALARGTWVVGDRHDLSSQAYQGGGRGIDKNLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD TI LDLP IGL R + R LD E++ + ++ R +L Sbjct: 120 SLRDTVLGDFRPDLTIYLDLPPQIGLLRARER------GELDRIEKESMDFFDRTRSRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + A VD+A + V +I ++ + ++++ Sbjct: 174 EFAAQDKS-IVTVDAAQPIEQVQADIYQVLEQWLKQQ 209 >gi|53723614|ref|YP_103080.1| thymidylate kinase [Burkholderia mallei ATCC 23344] gi|67640223|ref|ZP_00439038.1| dTMP kinase [Burkholderia mallei GB8 horse 4] gi|121601290|ref|YP_993235.1| thymidylate kinase [Burkholderia mallei SAVP1] gi|124386529|ref|YP_001029320.1| thymidylate kinase [Burkholderia mallei NCTC 10229] gi|126440272|ref|YP_001059316.1| thymidylate kinase [Burkholderia pseudomallei 668] gi|126448046|ref|YP_001080743.1| thymidylate kinase [Burkholderia mallei NCTC 10247] gi|166998743|ref|ZP_02264597.1| dTMP kinase [Burkholderia mallei PRL-20] gi|167719162|ref|ZP_02402398.1| thymidylate kinase [Burkholderia pseudomallei DM98] gi|254178271|ref|ZP_04884926.1| thymidylate kinase [Burkholderia mallei ATCC 10399] gi|254200026|ref|ZP_04906392.1| thymidylate kinase [Burkholderia mallei FMH] gi|254206360|ref|ZP_04912712.1| thymidylate kinase [Burkholderia mallei JHU] gi|254358225|ref|ZP_04974498.1| thymidylate kinase [Burkholderia mallei 2002721280] gi|59798166|sp|Q62JN9|KTHY_BURMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221726|sp|A3MKF7|KTHY_BURM7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221727|sp|A2SBK1|KTHY_BURM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221728|sp|A1V4T2|KTHY_BURMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221730|sp|A3NAE5|KTHY_BURP6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52427037|gb|AAU47630.1| thymidylate kinase [Burkholderia mallei ATCC 23344] gi|121230100|gb|ABM52618.1| thymidylate kinase [Burkholderia mallei SAVP1] gi|124294549|gb|ABN03818.1| dTMP kinase [Burkholderia mallei NCTC 10229] gi|126219765|gb|ABN83271.1| dTMP kinase [Burkholderia pseudomallei 668] gi|126240916|gb|ABO04009.1| dTMP kinase [Burkholderia mallei NCTC 10247] gi|147749622|gb|EDK56696.1| thymidylate kinase [Burkholderia mallei FMH] gi|147753803|gb|EDK60868.1| thymidylate kinase [Burkholderia mallei JHU] gi|148027352|gb|EDK85373.1| thymidylate kinase [Burkholderia mallei 2002721280] gi|160699310|gb|EDP89280.1| thymidylate kinase [Burkholderia mallei ATCC 10399] gi|238520911|gb|EEP84367.1| dTMP kinase [Burkholderia mallei GB8 horse 4] gi|243065097|gb|EES47283.1| dTMP kinase [Burkholderia mallei PRL-20] Length = 206 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVDS+ S + + ++ L Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKQLEGVLAAL 206 >gi|16804730|ref|NP_466215.1| thymidylate kinase [Listeria monocytogenes EGD-e] gi|224502896|ref|ZP_03671203.1| thymidylate kinase [Listeria monocytogenes FSL R2-561] gi|255028105|ref|ZP_05300056.1| thymidylate kinase [Listeria monocytogenes LO28] gi|284800421|ref|YP_003412286.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578] gi|284993607|ref|YP_003415375.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923] gi|23821785|sp|Q8Y3Y6|KTHY_LISMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|16412193|emb|CAD00906.1| lmo2693 [Listeria monocytogenes EGD-e] gi|284055983|gb|ADB66924.1| hypothetical protein LM5578_0167 [Listeria monocytogenes 08-5578] gi|284059074|gb|ADB70013.1| hypothetical protein LM5923_0167 [Listeria monocytogenes 08-5923] Length = 208 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + + Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ + + + IL + + Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207 >gi|260597469|ref|YP_003210040.1| thymidylate kinase [Cronobacter turicensis z3032] gi|260216646|emb|CBA29964.1| Thymidylate kinase [Cronobacter turicensis z3032] Length = 212 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 116/219 (52%), Gaps = 12/219 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M+S +I EG+EGAGKTT +L+ L+ D+ TREPGGT AE R ++L Sbjct: 1 MSS-KYIVIEGLEGAGKTTARNLVVETLKSLGITDMTFTREPGGTVLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG Sbjct: 60 VGDEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDREL 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ IGL+R + R LD E++ + + R Sbjct: 120 LATLRQTVLGDFAPDLTLYLDVDPRIGLERARAR------GELDRIEQESLDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++A P R +D+ +V+ +I + + VQ++ Sbjct: 174 YLELAAADP-RIITIDACQPLDAVSRDIRSAIARWVQEQ 211 >gi|47570434|ref|ZP_00241070.1| thymidylate kinase [Bacillus cereus G9241] gi|47552892|gb|EAL11307.1| thymidylate kinase [Bacillus cereus G9241] Length = 208 Score = 239 bits (612), Expect = 2e-61, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 109/210 (51%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLIEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + + + H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEGISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|21282166|ref|NP_645254.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MW2] gi|49485346|ref|YP_042567.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MSSA476] gi|23821762|sp|Q8NY05|KTHY_STAAW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56748991|sp|Q6GC06|KTHY_STAAS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21203602|dbj|BAB94302.1| tmk [Staphylococcus aureus subsp. aureus MW2] gi|49243789|emb|CAG42214.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus MSSA476] Length = 205 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 4 FITFEGPEGSGKTTVINKVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204 >gi|311028959|ref|ZP_07707049.1| thymidylate kinase [Bacillus sp. m3-13] Length = 212 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 4/213 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+FEG EGAGKT+ I L L + + + +TREPGG AE R+V+L C E Sbjct: 2 KGLFITFEGPEGAGKTSVIQKLGAELTEQEFPILLTREPGGIAIAEQIRNVILDCDNTEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E KI+LCDRF+DSS AYQG + S+ E Sbjct: 62 DARTEALLYAAARRQHLVERVIPALKENKIVLCDRFIDSSLAYQGYARGIGVEDVLSINE 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +++MP TI D+ + GLKR+ + ++ +++ + H K ++ + + Sbjct: 122 FATEKMMPSLTIYFDIEPEAGLKRIAANNN----REINRLDQEKLDFHYKVKEGYDLVKE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +R +VD++ F+SV + ++ K Sbjct: 178 KYGERIRVVDASMDFESVCNQVREVLISYFSKH 210 >gi|256833407|ref|YP_003162134.1| thymidylate kinase [Jonesia denitrificans DSM 20603] gi|256686938|gb|ACV09831.1| thymidylate kinase [Jonesia denitrificans DSM 20603] Length = 221 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 115/217 (52%), Gaps = 11/217 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++GLF++FEG +G+GKTT L ++L +D +TREPGGT + R +LL D Sbjct: 8 HAGLFLTFEGGDGSGKTTQARLAAQWLSDTYAHDALLTREPGGTELGQHIRQLLLHG--D 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + G AEA+++AA R HV VIRPAL G+ ++CDR+ DSS AYQG + + L Sbjct: 66 DMGPRAEALLYAADRSHHVHTVIRPALSLGRTVVCDRYFDSSIAYQGGGRTLTPKTIRDL 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +V ++PD T+++D+P +G R D ER H+ + + Sbjct: 126 SLWAVDGLIPDLTVLIDVPARVGAAR--------REGEPDRLERAGDDFHDTTHATYRHL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 A +P+R IVD + VA + + + + RV+ Sbjct: 178 AEQEPERWVIVDGIGTIDEVAGRVRAALVDRLGARVT 214 >gi|298291754|ref|YP_003693693.1| thymidylate kinase [Starkeya novella DSM 506] gi|296928265|gb|ADH89074.1| thymidylate kinase [Starkeya novella DSM 506] Length = 243 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 4/209 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T + L+ L + TREPGG+ AE RH++LS G Sbjct: 28 GRFITFEGGEGAGKSTQVRRLREKLAELGIEAVATREPGGSTGAEIMRHLILSGAAKPLG 87 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA +FAAAR DH++ IRPAL G ++CDRF DS+ AYQG + + +L+E+ Sbjct: 88 PLAEAALFAAARADHLDATIRPALARGAWVVCDRFADSTRAYQGVLGNIDPRLIAALEEV 147 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V + PD T+ILD+P + GL R R + D FE + V H + R+ F +A N Sbjct: 148 TVGDTRPDLTLILDIPAEEGLSRASARSGV----AADRFESEGVGFHRRLREAFRALAEN 203 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P RC ++D+ +VA I V E + Sbjct: 204 EPQRCVLIDARPDADTVAEAIWTAVQERL 232 >gi|300691472|ref|YP_003752467.1| thymidylate kinase [Ralstonia solanacearum PSI07] gi|299078532|emb|CBJ51187.1| thymidylate kinase [Ralstonia solanacearum PSI07] Length = 205 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL +I R+ ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +P+R I+D+A + + ++ ++ L Sbjct: 173 RRAAAEPERFVIIDAARARDDIRKDLEKLLASL 205 >gi|156934415|ref|YP_001438331.1| thymidylate kinase [Cronobacter sakazakii ATCC BAA-894] gi|166221741|sp|A7MFR1|KTHY_ENTS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|156532669|gb|ABU77495.1| hypothetical protein ESA_02246 [Cronobacter sakazakii ATCC BAA-894] Length = 212 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 12/219 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M+S +I EG+EGAGKTT +L+ L+ D+ TREPGGT AE R ++L Sbjct: 1 MSS-KYIVIEGLEGAGKTTARNLVVETLKSLGVTDMTFTREPGGTVLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG Sbjct: 60 VGDEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRQL 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ IGL+R + R LD E++ + + R Sbjct: 120 LATLRQAVLGDFAPDLTLYLDVDPRIGLERARAR------GELDRIEQESLDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++A P R +D+ ++V+ +I V VQ++ Sbjct: 174 YLELAAADP-RIITIDACQPLEAVSHDIRATVTRWVQEQ 211 >gi|306817710|ref|ZP_07451452.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239] gi|304649524|gb|EFM46807.1| thymidylate kinase [Mobiluncus mulieris ATCC 35239] Length = 246 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 9/216 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60 G F++FEG +G GK+T I L +++ + ++V TREPGGT R +LL G Sbjct: 29 TRGAFVAFEGTDGVGKSTQIKLAADWVKTRGWEVVTTREPGGTNLGRQLRELLLEAGETT 88 Query: 61 ----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AEA++FAA R HV +I PAL GKI++ DRF+ SS AYQG+ Sbjct: 89 VCEGQVAPRAEALLFAADRAQHVAELIVPALNAGKIVISDRFMASSVAYQGQGRDLGPKE 148 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L + + P+ T++LDL +I +R + + D E + + K R Sbjct: 149 IRDLSLWATGGLTPNLTVLLDLDPEIAWER---QQNDETRVSPDRMEGEGLEFQRKVRAR 205 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F +A + +VD++ + + +A + + ++ Sbjct: 206 FRRLAEGN-ETWMVVDASLAPEEIAAQVRLRLASVL 240 >gi|295096208|emb|CBK85298.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 213 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 114/219 (52%), Gaps = 12/219 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVDTLTSLGVADMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL EGK ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALAEGKWVIGDRHDLSTQAYQGGGRGIDQAM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++A +D+ S + V +I V + +Q++ Sbjct: 174 YLELAGQDK-TIRTIDATQSLEDVTRDIQQTVTQWLQEQ 211 >gi|148270766|ref|YP_001245226.1| dTMP kinase [Thermotoga petrophila RKU-1] gi|166223125|sp|A5IN77|KTHY_THEP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147736310|gb|ABQ47650.1| thymidylate kinase [Thermotoga petrophila RKU-1] Length = 197 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 15/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL R+L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIKLLARYLEKRGKRVILKREPGGTETGEKIRKLLLK---EEMTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R V I+ L EG ++L DR+ DSS AYQG + ++ L + + Sbjct: 58 KAELFLFLASRNLLVME-IKRYLSEGYVVLLDRYTDSSVAYQGFGRNLGKEIVEKLNDFA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ L R L+ FE++ E+ R+ +L +A+ Sbjct: 117 TDSLVPDLTFYIDVDVETALNR---------KGELNRFEKR--EFLERVREGYLVLAKEH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P+R ++D S + + +++ V Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVER 191 >gi|167562453|ref|ZP_02355369.1| thymidylate kinase [Burkholderia oklahomensis EO147] gi|167569636|ref|ZP_02362510.1| thymidylate kinase [Burkholderia oklahomensis C6786] Length = 206 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 106/215 (49%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHIS----LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ L+ L + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGKSGKHVVVTREPGGTRLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A+ P R IVDS+ + + ++ L Sbjct: 172 YLRRAQEAPHRFAIVDSSEPIPQIRKKLEGVLAAL 206 >gi|17546503|ref|NP_519905.1| thymidylate kinase [Ralstonia solanacearum GMI1000] gi|23821784|sp|Q8XYH4|KTHY_RALSO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|17428801|emb|CAD15486.1| probable thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum GMI1000] Length = 205 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 114/213 (53%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL ++ R+ ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +P R ++D+A + + ++ ++ L Sbjct: 173 RRAAAEPGRFVVIDAARARDDIRKDLEKLLASL 205 >gi|161503708|ref|YP_001570820.1| thymidylate kinase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|189030840|sp|A9MGB6|KTHY_SALAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|160865055|gb|ABX21678.1| hypothetical protein SARI_01792 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 213 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P R +D+ +V +I V VQ + + Sbjct: 179 AQDP-RIRTIDATQPLDAVMRDIRATVTTWVQGQAA 213 >gi|217966109|ref|YP_002351787.1| thymidylate kinase [Listeria monocytogenes HCC23] gi|254808300|sp|B8DAU8|KTHY_LISMH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|217335379|gb|ACK41173.1| thymidylate kinase [Listeria monocytogenes HCC23] gi|307572281|emb|CAR85460.1| tmk [Listeria monocytogenes L99] Length = 208 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAVGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + + Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ + + + IL + + Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207 >gi|161508727|ref|YP_001574386.1| thymidylate kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253735215|ref|ZP_04869380.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130] gi|297591609|ref|ZP_06950246.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8] gi|304380498|ref|ZP_07363175.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|160367536|gb|ABX28507.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726775|gb|EES95504.1| dTMP kinase [Staphylococcus aureus subsp. aureus TCH130] gi|297575478|gb|EFH94195.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MN8] gi|304340943|gb|EFM06866.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312436430|gb|ADQ75501.1| thymidylate kinase [Staphylococcus aureus subsp. aureus TCH60] gi|320139433|gb|EFW31311.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA131] gi|320144210|gb|EFW35978.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA177] Length = 208 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L Sbjct: 1 MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + + Sbjct: 58 NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E ++ + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + + Sbjct: 118 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I N+ R V++ ++V + + + ++K Sbjct: 173 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 207 >gi|114570004|ref|YP_756684.1| thymidylate kinase [Maricaulis maris MCS10] gi|114340466|gb|ABI65746.1| thymidylate kinase [Maricaulis maris MCS10] Length = 211 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 88/196 (44%), Positives = 114/196 (58%), Gaps = 5/196 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT I L L ++ DV VTREPGGTP AE R +LL+ V+ Sbjct: 1 MKHGKFITLEGGEGAGKTTLIQGLTHALADRDIDVVVTREPGGTPGAELLRDLLLNGEVE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + EA++ AAR+DHVE I+PAL G +LCDRF DS+ AYQG + L L Sbjct: 61 RWSSRTEALLMYAARVDHVERRIKPALSRGAWVLCDRFADSTRAYQGVAGGLEPAELADL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q ++ + D T+I+DL +IGLKR R FE+ D H + RQ FLDI Sbjct: 121 QRFALGDFSADMTLIVDLDPEIGLKRTLQRGEKIT-----RFEKFDTSYHRRLRQAFLDI 175 Query: 181 ARNQPDRCHIVDSAHS 196 A P+RC ++D S Sbjct: 176 ASEDPERCVVLDGTQS 191 >gi|210630412|ref|ZP_03296447.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279] gi|210160494|gb|EEA91465.1| hypothetical protein COLSTE_00331 [Collinsella stercoris DSM 13279] Length = 225 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 6/211 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EGI+G GK+T +L++ L YDV REPGG +E R VLL D Sbjct: 1 MTKGHFITVEGIDGVGKSTQAALMEVLLDSAGYDVLRLREPGGVSISEQIRAVLLDPAND 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E G E +++ AAR V VIRPAL GK ++CDRF DS+ AYQ D + Sbjct: 61 EMGDMCELLLYEAARAQLVHQVIRPALTAGKTVICDRFYDSTTAYQSFADGLDRDMVFQA 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++V PD T++ DLPV+ +R +R + D E K ++ + F + Sbjct: 121 NELAVDGCRPDLTLVFDLPVEDAHRRRSDR------SAEDRLELKGRDFQQRVSEGFRAV 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A ++PDR +VD+ S V + +++ + Sbjct: 175 AADEPDRVRLVDAGGSIAEVFSIVVDELRAA 205 >gi|326802968|ref|YP_004320786.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a] gi|326650724|gb|AEA00907.1| dTMP kinase [Aerococcus urinae ACS-120-V-Col10a] Length = 226 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 10/224 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FISFEG +G+GKTT I LK L Q +REPGG AE R ++LS E Sbjct: 3 GVFISFEGPDGSGKTTLIKGLKARLDQDLKQAPIFSREPGGDRIAEEIRDIILSPVNTEL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A +EA+++AA+R H+ IRPAL G ++LCDR++DSS AYQG + + Sbjct: 63 DARSEALLYAASRAQHLAQKIRPALAAGNMVLCDRYVDSSIAYQGYGRKLGGQAVQLINA 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ ++PD T+ D+ + G+ R++ + ++ +++ + H + Q + D+ + Sbjct: 123 FAIDGLLPDLTLYCDISAEEGIARIEA----GRTNEINRLDQESIAFHRRVVQGYQDLLK 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE-----LVQKRVSPLSS 221 PDR +D++ +++ ++ + + ++ SP + Sbjct: 179 ENPDRIVPIDASQPAEAMQAAAYELIRQRFPQFFLSRKDSPNDA 222 >gi|71064726|ref|YP_263453.1| thymidylate kinase [Psychrobacter arcticus 273-4] gi|71037711|gb|AAZ18019.1| thymidylate kinase [Psychrobacter arcticus 273-4] Length = 225 Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 105/213 (49%), Gaps = 14/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG EG GKTT I L LQ D TREPGG+P AE R +LL Sbjct: 18 QGHFISFEGTEGVGKTTAIEQLCARLQANGIDYLRTREPGGSPFAERLREILLDP-NTAI 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---- 118 + E ++ AAR DH++ VI PAL G ++CDRF DS+ AYQG + + Sbjct: 77 NDDTELLLMFAARCDHMQQVILPALQRGTWVICDRFTDSTVAYQGFGRADGDATVRGKID 136 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ Q +P+ T+ LDLPV G+ R R + D FE++ + + F Sbjct: 137 TLIEQFVTQ--LPELTLWLDLPVLEGMARANKR------SAADRFEQQATDFFTRVHKGF 188 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A P R +D++ S V+ I V E Sbjct: 189 RTLADEYPKRIQRIDASGSADEVSARIWQKVEE 221 >gi|332042231|gb|EGI78557.1| thymidylate kinase [Hylemonella gracilis ATCC 19624] Length = 211 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 114/213 (53%), Gaps = 15/213 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG F+SFEGI+GAGK+THI L + L+ + + V +TREPGGTP AE R ++L ++ Sbjct: 2 SGFFVSFEGIDGAGKSTHIERLAQVLREQGHMVTLTREPGGTPLAERLRALVL---AEKM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++ AAR DH++ VI PAL G +LCDR+ D+SYAYQG L +L+ Sbjct: 59 DALTEALLVFAARRDHLQTVIEPALARGDAVLCDRYTDASYAYQGGGRGLDVSVLATLER 118 Query: 123 I------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + PD T+ DL ++ +R+ + D FE + V + + Sbjct: 119 WVQAKPGAAGLRQPDLTLWFDLAPELAAERLSG------ARAPDKFEAEPVAFFRRVAEG 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + A P R +D+A S ++V +L +V Sbjct: 173 YARRAAEDPGRFARLDAAQSREAVWDELLRVVR 205 >gi|22299598|ref|NP_682845.1| thymidylate kinase [Thermosynechococcus elongatus BP-1] gi|46576557|sp|Q8DHA4|KTHY_THEEB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|22295782|dbj|BAC09607.1| thymidylate kinase [Thermosynechococcus elongatus BP-1] Length = 241 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 115/241 (47%), Gaps = 27/241 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----------DVHVTREPGGTPAAEAAR 51 +GLFI EG EGAGKTT + + +L+ + + +TREPGGTP + R Sbjct: 9 AGLFIVLEGGEGAGKTTQMGAIATWLENSGWLAKLRSCHVDPPLLLTREPGGTPLGQGLR 68 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 +LL + AE +++AA R HV IRP L G I+LCDR+ S+ AYQG Sbjct: 69 QLLLHSDL-AIDPLAELLLYAADRAQHVAMGIRPQLQRGGIVLCDRYTASTVAYQGYGRG 127 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + + +++ + D + LDLPV +GL R Q R D E+ V HE Sbjct: 128 LDLQIIQHINQMATGGLGADLVLWLDLPVAVGLARTQQR------GRGDRLEQNAVAFHE 181 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-------ELVQKRVSPLSSKKD 224 + RQ FL +A+ DR +D+ V I + E +++R++ +D Sbjct: 182 RVRQGFLALAQQGSDRWQRIDADQPPDQVTQAIQECLAAHLHRWFETLKQRLT--GGDRD 239 Query: 225 I 225 + Sbjct: 240 L 240 >gi|304439671|ref|ZP_07399573.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371851|gb|EFM25455.1| thymidylate kinase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 202 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG +G GKTT + ++ + L+ Y V TREPGGT +E R ++L DE Sbjct: 2 KGKFITFEGPDGCGKTTVVDMIYKKLESLGYRVIKTREPGGTDISEKIRDLILDVNNDEM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA+R H E I P L +G I+LC+R++ SSYAYQG + ++ + Sbjct: 62 SPRCEALLYAASRAQHTEEKIVPYLNKGYIVLCERYILSSYAYQGYGRGLLEGVV-AIND 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI+L +GL+R + D E + H+K + + +IA+ Sbjct: 121 FATAGIRPDLTILLMGDYRVGLER-------KNEMGADRLELESTDFHKKVYKGYEEIAK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++D+ ++V N L + E+++ Sbjct: 174 YED--VTVIDANSELETVFNNTLEKILEMIE 202 >gi|70727528|ref|YP_254444.1| thymidylate kinase [Staphylococcus haemolyticus JCSC1435] gi|123659174|sp|Q4L3D9|KTHY_STAHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|68448254|dbj|BAE05838.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 203 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 110/208 (52%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT + + L ++Y + TREPGG P E R V+L Sbjct: 4 FITFEGPEGSGKTTVLQRVSEKL-AQDYQLIATREPGGVPTGEEIRKVVLEGAN--MDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + L + ++ Sbjct: 61 TEAMLFAASRREHLVEKVVPALNDNKIVLCDRYIDSSLAYQGYARGIGIEEVKQLNDFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G R+ L+ + +++D+ HEK + + I + P Sbjct: 121 NGLYPDLTIYLDITAEVGRDRI-----LKNQRDQNRLDKEDIAFHEKVIEGYRQIIQETP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 R +VD+ + V I+ ++ Sbjct: 176 QRFAVVDATRNIDDVVNETYEIILNFLK 203 >gi|83748622|ref|ZP_00945641.1| Thymidylate kinase [Ralstonia solanacearum UW551] gi|207723527|ref|YP_002253926.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum MolK2] gi|207743119|ref|YP_002259511.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum IPO1609] gi|83724746|gb|EAP71905.1| Thymidylate kinase [Ralstonia solanacearum UW551] gi|206588728|emb|CAQ35691.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum MolK2] gi|206594516|emb|CAQ61443.1| thymidylate kinase (dtmp kinase) protein [Ralstonia solanacearum IPO1609] Length = 205 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGRKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL +I R+ ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTKTLLFDLAPEIAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +P+R I+D+ + + ++ ++ L Sbjct: 173 RRAAAEPERFVIIDADRARDDIRKDLEQLLASL 205 >gi|206977923|ref|ZP_03238810.1| thymidylate kinase [Bacillus cereus H3081.97] gi|206743829|gb|EDZ55249.1| thymidylate kinase [Bacillus cereus H3081.97] gi|324324020|gb|ADY19280.1| thymidylate kinase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 208 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEEIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDITFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|85708666|ref|ZP_01039732.1| thymidylate kinase [Erythrobacter sp. NAP1] gi|85690200|gb|EAQ30203.1| thymidylate kinase [Erythrobacter sp. NAP1] Length = 216 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 4/213 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+FEG EG GK+T L L+ + V VTREPGGTP AEA R +LL D Sbjct: 5 TRGLFIAFEGGEGTGKSTQTLKLADALRARGKVVEVTREPGGTPGAEAIRQLLLHPPGDG 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +GA+AEA++FAAAR DHV I+P+L +G ++ DRF+DSS AYQG + +L Sbjct: 65 WGAQAEALLFAAARSDHVAQHIKPSLEKGVWVVTDRFVDSSRAYQGGAGGLGDEAITALH 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD TI+L++ D R+ R + R+ D + H F +A Sbjct: 125 AFGSDGLRPDLTILLEVDED----RLTQRLAERDGGTSDAIGGRSADYHRAVAARFRKLA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+ IVD + V +L+ + +L+ + Sbjct: 181 EADPNGFRIVDGTGTPDEVHNRVLDALADLLGQ 213 >gi|53719072|ref|YP_108058.1| thymidylate kinase [Burkholderia pseudomallei K96243] gi|76810598|ref|YP_333838.1| thymidylate kinase [Burkholderia pseudomallei 1710b] gi|126454444|ref|YP_001066584.1| thymidylate kinase [Burkholderia pseudomallei 1106a] gi|167845304|ref|ZP_02470812.1| thymidylate kinase [Burkholderia pseudomallei B7210] gi|242317737|ref|ZP_04816753.1| dTMP kinase [Burkholderia pseudomallei 1106b] gi|254189148|ref|ZP_04895659.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237] gi|254197999|ref|ZP_04904421.1| thymidylate kinase [Burkholderia pseudomallei S13] gi|254260912|ref|ZP_04951966.1| dTMP kinase [Burkholderia pseudomallei 1710a] gi|59798178|sp|Q63V08|KTHY_BURPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123598846|sp|Q3JRG5|KTHY_BURP1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221729|sp|A3NW63|KTHY_BURP0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52209486|emb|CAH35438.1| putative thymidylate kinase [Burkholderia pseudomallei K96243] gi|76580051|gb|ABA49526.1| thymidylate kinase [Burkholderia pseudomallei 1710b] gi|126228086|gb|ABN91626.1| thymidylate kinase [Burkholderia pseudomallei 1106a] gi|157936827|gb|EDO92497.1| thymidylate kinase [Burkholderia pseudomallei Pasteur 52237] gi|169654740|gb|EDS87433.1| thymidylate kinase [Burkholderia pseudomallei S13] gi|242140976|gb|EES27378.1| dTMP kinase [Burkholderia pseudomallei 1106b] gi|254219601|gb|EET08985.1| dTMP kinase [Burkholderia pseudomallei 1710a] Length = 206 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R R ++R D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASAR---RGAVR---MPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVDS+ S + + ++ L Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRRQLEGVLAAL 206 >gi|260913250|ref|ZP_05919732.1| dTMP kinase [Pasteurella dagmatis ATCC 43325] gi|260632837|gb|EEX51006.1| dTMP kinase [Pasteurella dagmatis ATCC 43325] Length = 215 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 117/213 (54%), Gaps = 8/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M +G FI EGIEGAGKTT + R L D+ TREPGGTP AE RH++ Sbjct: 5 MKTGKFIVLEGIEGAGKTTARDSIVRALNAYGIQDIVFTREPGGTPLAEKLRHLIKHETE 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +AE ++ AAR+ VENVI+PAL EGK ++ DR SS AYQG L + Sbjct: 65 EPVTDKAELLMLYAARIQLVENVIKPALAEGKWVIGDRHDMSSQAYQGGGRQLDKTLLLT 124 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+E + + PD T+ LD+ +GL R + R LD E++++ ++ RQ +L+ Sbjct: 125 LKETVLGDFEPDLTLYLDIDPVLGLTRARGR------GALDRIEQQNIDFFQRTRQRYLE 178 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++ P C +D++H V+ ++ + V + Sbjct: 179 LVQDNPKACC-IDASHEIDKVSADVQSAVENWL 210 >gi|160871899|ref|ZP_02062031.1| thymidylate kinase [Rickettsiella grylli] gi|159120698|gb|EDP46036.1| thymidylate kinase [Rickettsiella grylli] Length = 218 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 119/210 (56%), Gaps = 8/210 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62 FI+ EGIEG GK+T + + +LQ+ + + +TREPGGTP AEA R +LL + Sbjct: 7 RFITLEGIEGVGKSTQLKFVADYLQQAHIPLTITREPGGTPIAEAIRSLLLQSDFSPEML 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++F AAR H+ VI+PAL G +LCDRF ++SYAYQG F+ SL Sbjct: 67 IPETELLLFFAARAQHIHYVIKPALQRGDWVLCDRFTETSYAYQGGGRGIDVAFIRSLHL 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 Q++ + ++LD PVDI L+R+++R + D E + + R +L+ A+ Sbjct: 127 WVQQDLNVNVVLLLDAPVDIALRRMRHRKTA------DRIEAEKHDFFTRARASYLERAQ 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +PD ++D++ S + V I N++ L+ Sbjct: 181 QRPDVYQVIDASRSLKDVQKQIKNVLDRLL 210 >gi|258424483|ref|ZP_05687362.1| thymidylate kinase [Staphylococcus aureus A9635] gi|257845352|gb|EEV69387.1| thymidylate kinase [Staphylococcus aureus A9635] Length = 210 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 9/215 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L Sbjct: 3 MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA++FAA+R +H+ + PAL EGKI+LCDR++DSS AYQG + + Sbjct: 60 NDMDIRTEAMLFAASRREHLVLKVIPALKEGKIVLCDRYIDSSLAYQGYARGIGVEEVRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E ++ + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + + Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I N+ R V++ ++V + + + ++K Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|289449651|ref|YP_003475316.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184198|gb|ADC90623.1| dTMP kinase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 212 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 6/214 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+FEGI+G+GKTT ++LL +L+R+N V V REPGGT EA R +LLS Sbjct: 1 MRKGQLITFEGIDGSGKTTQLNLLADYLRRQNEAVVVLREPGGTELGEAVRSLLLSSKYK 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +E +F AAR VI PAL GK +LCDRF+DS+ AYQG L SL Sbjct: 61 KMSDRSELYLFLAARAQLCNEVIAPALSLGKFVLCDRFIDSTIAYQGYGRGLDPATLKSL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + P+ T L +PV ++R+ R LD E + + + + + Sbjct: 121 NSMATAGISPNITFYLRIPVATAVERMMVRDI-----ALDRMEAQADHFRQAVVKGYDVL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A +P R + + S +++ ILN V + K Sbjct: 176 AATEP-RFVTIKADQSIENIHEIILNEVRRFIYK 208 >gi|145219852|ref|YP_001130561.1| thymidylate kinase [Prosthecochloris vibrioformis DSM 265] gi|189030836|sp|A4SF00|KTHY_PROVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145206016|gb|ABP37059.1| thymidylate kinase [Chlorobium phaeovibrioides DSM 265] Length = 215 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 4/216 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L L+ + +V REPGGT AE R +LL D Sbjct: 1 MLITFEGIDGAGKSTQIRKLAAHLRSQGQEVLTLREPGGTEVAENIRLILLESRHD-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V VIRPAL EG ++ DRF DS+ AYQG L+S+ +S Sbjct: 60 VGELLLFSASRAELVNEVIRPALKEGTTVILDRFFDSTTAYQGYGRGIDLPTLNSIIALS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + S+ ++ LD ER + + K + + I Sbjct: 120 TGGLKPDITFYLDILPEEALIRKFSEKSIPLAFDNDELDRMERSGLDFYRKVYEGYRCIM 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +PDR +++ S Q + T + + E R S Sbjct: 180 QEEPDRFVSINARKSIQEIHTTVTKTLKEQRAGRQS 215 >gi|151220658|ref|YP_001331480.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. Newman] gi|257424593|ref|ZP_05601021.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427259|ref|ZP_05603660.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429895|ref|ZP_05606281.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397] gi|257432598|ref|ZP_05608960.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410] gi|257435503|ref|ZP_05611553.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876] gi|257794277|ref|ZP_05643256.1| thymidylate kinase [Staphylococcus aureus A9781] gi|258407206|ref|ZP_05680351.1| thymidylate kinase [Staphylococcus aureus A9763] gi|258420828|ref|ZP_05683764.1| thymidylate kinase [Staphylococcus aureus A9719] gi|258429598|ref|ZP_05688272.1| thymidylate kinase [Staphylococcus aureus A9299] gi|258446131|ref|ZP_05694292.1| thymidylate kinase [Staphylococcus aureus A6300] gi|258448039|ref|ZP_05696169.1| thymidylate kinase [Staphylococcus aureus A6224] gi|258452837|ref|ZP_05700832.1| thymidylate kinase [Staphylococcus aureus A5948] gi|258453814|ref|ZP_05701787.1| thymidylate kinase [Staphylococcus aureus A5937] gi|282895088|ref|ZP_06303308.1| thymidylate kinase [Staphylococcus aureus A8117] gi|282903066|ref|ZP_06310958.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160] gi|282904857|ref|ZP_06312717.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907803|ref|ZP_06315642.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910120|ref|ZP_06317926.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049] gi|282913308|ref|ZP_06321099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899] gi|282923013|ref|ZP_06330699.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101] gi|282925555|ref|ZP_06333208.1| thymidylate kinase [Staphylococcus aureus A9765] gi|283957270|ref|ZP_06374728.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97] gi|293500358|ref|ZP_06666210.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424] gi|293509296|ref|ZP_06668012.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809] gi|293515884|ref|ZP_06670574.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015] gi|150373458|dbj|BAF66718.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. Newman] gi|257272620|gb|EEV04740.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275910|gb|EEV07378.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279411|gb|EEV10006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 68-397] gi|257282463|gb|EEV12596.1| thymidylate kinase [Staphylococcus aureus subsp. aureus E1410] gi|257285140|gb|EEV15257.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M876] gi|257788249|gb|EEV26589.1| thymidylate kinase [Staphylococcus aureus A9781] gi|257841164|gb|EEV65613.1| thymidylate kinase [Staphylococcus aureus A9763] gi|257843220|gb|EEV67633.1| thymidylate kinase [Staphylococcus aureus A9719] gi|257849657|gb|EEV73624.1| thymidylate kinase [Staphylococcus aureus A9299] gi|257855108|gb|EEV78050.1| thymidylate kinase [Staphylococcus aureus A6300] gi|257858729|gb|EEV81602.1| thymidylate kinase [Staphylococcus aureus A6224] gi|257859523|gb|EEV82376.1| thymidylate kinase [Staphylococcus aureus A5948] gi|257863985|gb|EEV86740.1| thymidylate kinase [Staphylococcus aureus A5937] gi|282314532|gb|EFB44919.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C101] gi|282322779|gb|EFB53099.1| dTMP kinase [Staphylococcus aureus subsp. aureus M899] gi|282325968|gb|EFB56274.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WBG10049] gi|282328318|gb|EFB58592.1| thymidylate kinase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331974|gb|EFB61483.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Btn1260] gi|282592459|gb|EFB97471.1| thymidylate kinase [Staphylococcus aureus A9765] gi|282596492|gb|EFC01452.1| dTMP kinase [Staphylococcus aureus subsp. aureus C160] gi|282762506|gb|EFC02646.1| thymidylate kinase [Staphylococcus aureus A8117] gi|283791194|gb|EFC30004.1| dTMP kinase [Staphylococcus aureus subsp. aureus A017934/97] gi|290921292|gb|EFD98350.1| dTMP kinase [Staphylococcus aureus subsp. aureus M1015] gi|291096318|gb|EFE26578.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 58-424] gi|291467841|gb|EFF10351.1| thymidylate kinase [Staphylococcus aureus subsp. aureus M809] Length = 210 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L Sbjct: 3 MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + + Sbjct: 60 NDMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E ++ + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + + Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I N+ R V++ ++V + + + ++K Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|227326856|ref|ZP_03830880.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 219 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT +++ L+ DV TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGMA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ V+NVI+PAL G ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R + R LD E++ + ++ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRSRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A D +D++ S +V+ +I Sbjct: 174 ELAAED-DSILTIDASQSIDAVSADI 198 >gi|302332195|gb|ADL22388.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus JKD6159] Length = 205 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 4 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRTLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRNQNRLDQEDLKFHEKVIEGYQEIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204 >gi|300023248|ref|YP_003755859.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888] gi|299525069|gb|ADJ23538.1| thymidylate kinase [Hyphomicrobium denitrificans ATCC 51888] Length = 209 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 8/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG GK+T L L+R V +TREPGGTP E R ++ Sbjct: 1 MKRGKFITFEGGEGVGKSTQAKRLAERLERAGVPVIITREPGGTPVGEDVRDLI--MKDR 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++FAAAR +HV +VIRPAL +G ++ DRF+DS+ YQG+R + + L Sbjct: 59 PTDPMTELLLFAAARAEHVTSVIRPALDDGTWVISDRFIDSTRVYQGKRYGLEPELISLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +V PD T+ILDLP G++R QNR L ++ + + HE R+ FL+I Sbjct: 119 ERYTVSPDFPDLTLILDLPATEGVERAQNR------GTLSRYDAERIETHEVLRKGFLEI 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A ++P RC ++D++ SV T + V + Sbjct: 173 ATSEPKRCVLIDASLPVSSVETAVWQAVSAHL 204 >gi|148358930|ref|YP_001250137.1| thymidylate kinase [Legionella pneumophila str. Corby] gi|296106978|ref|YP_003618678.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy] gi|166221751|sp|A5IBP1|KTHY_LEGPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148280703|gb|ABQ54791.1| thymidylate kinase [Legionella pneumophila str. Corby] gi|295648879|gb|ADG24726.1| dTMP kinase [Legionella pneumophila 2300/99 Alcoy] Length = 212 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 8/215 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL EG+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNEGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+ LD+ ++G+ R ++R D E++ + + + + Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHILV 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P+ ++D+ + V ++I +++ E ++ + Sbjct: 179 KQNPE-IMMIDANRPLEDVQSSIQSVIEEFIEHNL 212 >gi|282918262|ref|ZP_06326002.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427] gi|282317828|gb|EFB48197.1| thymidylate kinase [Staphylococcus aureus subsp. aureus C427] Length = 210 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 124/215 (57%), Gaps = 9/215 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L Sbjct: 3 MNKMSAFITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG-- 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + + Sbjct: 60 NDMDIRTEAMLFAASRREHLVLKVVPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E ++ + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + + Sbjct: 120 LNEFAINGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I N+ R V++ ++V + + + ++K Sbjct: 175 IIHNESQRFKSVNADQPLENVVEDTYQTIIKYLEK 209 >gi|119714651|ref|YP_921616.1| thymidylate kinase [Nocardioides sp. JS614] gi|119535312|gb|ABL79929.1| thymidylate kinase [Nocardioides sp. JS614] Length = 222 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+F+ EG EG+GK+T LL+ +L+ + ++V +T EPG T R ++LS Sbjct: 16 TGVFVCLEGGEGSGKSTQSGLLRDWLETQGFEVLLTFEPGDTEVGRKLRAIVLSPETGAI 75 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA+++AA + +HV+ V++PAL G +++ DR++ S AYQG + ++ + Sbjct: 76 SDRTEALLYAADKAEHVDTVVQPALDRGAVVITDRYVASMLAYQGAGRALDVGEVEQVAR 135 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ P T++LDL + GL R + R D E + V H + R+ FL +A Sbjct: 136 WATHDLRPHLTVVLDLEPEHGLGRFEER---------DRIEGESVEFHRRVREGFLGMAA 186 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PD ++D+ + +A + + V L+ + Sbjct: 187 ADPDHYLVLDARGDREEIAGRVRDRVAPLLDR 218 >gi|145636277|ref|ZP_01791946.1| thymidylate kinase [Haemophilus influenzae PittHH] gi|145270442|gb|EDK10376.1| thymidylate kinase [Haemophilus influenzae PittHH] Length = 210 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE R ++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRDLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ IGL R + R LD E+ D+ + R +L + Sbjct: 122 ETVLGDFEPDLTIYLDIDPSIGLARARGR------GELDRIEQMDLDFFHRTRARYLALV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I + V Sbjct: 176 KDNP-KAVMINAEQSIELVQADIESAVKNW 204 >gi|313606342|gb|EFR83276.1| thymidylate kinase [Listeria monocytogenes FSL F2-208] Length = 208 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +P+ T LD+P ++GL R+ + ++ +++D+ HEK + + + Sbjct: 120 NLYAIEDTLPNRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ + + + IL + + Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207 >gi|300704091|ref|YP_003745693.1| thymidylate kinase [Ralstonia solanacearum CFBP2957] gi|299071754|emb|CBJ43078.1| thymidylate kinase [Ralstonia solanacearum CFBP2957] Length = 205 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 112/213 (52%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L+ Q + P T++ DL +I R+ ++ D FE + + R +L Sbjct: 119 ALEHWVQQGLQPTKTLLFDLAPEIAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P+R I+D+ + + ++ ++ L Sbjct: 173 RRAAADPERFVIIDADRARDDIRKDLEKLLASL 205 >gi|253688875|ref|YP_003018065.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259494276|sp|C6DKS8|KTHY_PECCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|251755453|gb|ACT13529.1| thymidylate kinase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 219 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 MNS FI EG+EGAGKTT ++ L+ +V TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARHIVVETLRSHGVKEVVFTREPGGTPLAEKLRELIKQGMT 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE +AE ++ AAR+ V+NVI+PAL G+ ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALANGQWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R + R LD E++ + E+ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQESLAFFERTRSRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A D +D++ S ++V+ +I Sbjct: 174 ELAAED-DSILTIDASQSIEAVSADI 198 >gi|152969650|ref|YP_001334759.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238894132|ref|YP_002918866.1| thymidylate kinase [Klebsiella pneumoniae NTUH-K2044] gi|329999483|ref|ZP_08303437.1| dTMP kinase [Klebsiella sp. MS 92-3] gi|166221748|sp|A6T7F8|KTHY_KLEP7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|150954499|gb|ABR76529.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238546448|dbj|BAH62799.1| thymidylate kinase [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328538309|gb|EGF64448.1| dTMP kinase [Klebsiella sp. MS 92-3] Length = 213 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT L+ LQ +D+ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTILAEKLRSLVLDIQSTGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L +L+ Sbjct: 65 INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ ++GL+R + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P VD+ +VA +I + + + ++ + Sbjct: 179 AADPS-IRTVDATQPLDAVARDIRATIAQWMAEQAA 213 >gi|42779109|ref|NP_976356.1| thymidylate kinase [Bacillus cereus ATCC 10987] gi|59798342|sp|Q73FH8|KTHY_BACC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|42735024|gb|AAS38964.1| thymidylate kinase [Bacillus cereus ATCC 10987] Length = 208 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 110/210 (52%), Gaps = 4/210 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQGLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALDEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDITFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR +V++ + + ++ ++ + + Sbjct: 178 RFSDRIVLVNADQPMEKLIEEVIQVIEDKL 207 >gi|299066795|emb|CBJ37989.1| thymidylate kinase [Ralstonia solanacearum CMR15] Length = 205 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 114/213 (53%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + L+ + V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLEARLAPQGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALERGDWVISDRFTDATFAYQGGGRGLAIERLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ Q + P T++ DL ++ R+ ++ D FE + + R +L Sbjct: 119 ALEQWVQQGLQPTRTLLFDLAPEVAAARLA------DARTPDKFEAESAQFFVRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +P R IVD+A + + ++ ++ L Sbjct: 173 RRAAAEPGRFVIVDAARARDDIRKDLEKLLASL 205 >gi|89074515|ref|ZP_01160987.1| putative thymidylate kinase [Photobacterium sp. SKA34] gi|89049619|gb|EAR55178.1| putative thymidylate kinase [Photobacterium sp. SKA34] Length = 209 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 117/214 (54%), Gaps = 9/214 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDE- 61 G FI EG+EGAGK+T I + L + TREPGGTP AE R ++ DE Sbjct: 3 GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHAPASTREPGGTPLAEQMRALVKEGHPDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR+ V+NVI+PAL +G ++ DR SS AYQG +++L+ Sbjct: 63 LTDMAELLLLYAARIQLVDNVIKPALNQGLWVVGDRHDMSSQAYQGGGRGFDRALMENLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI +D+ ++GL+R + R LD E+ ++ + R FL+++ Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNIDFFHRARARFLELS 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 NQP+ IVD++ S + V ++ + + ++++ Sbjct: 177 ENQPN-VIIVDASQSLEKVTEDLQSALNAWLEQQ 209 >gi|77360743|ref|YP_340318.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125] gi|123588315|sp|Q3IHC1|KTHY_PSEHT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|76875654|emb|CAI86875.1| thymidylate kinase [Pseudoalteromonas haloplanktis TAC125] Length = 208 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 113/213 (53%), Gaps = 7/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI EG+EGAGK+T I+L + FL K D REPGGTP AE+ R ++ + +E Sbjct: 2 KPKFIVIEGLEGAGKSTAIALCQSFLNSKKIDFINVREPGGTPLAESLRTLVKAQHDEEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR + NVI PAL +G+ +L DR SS AYQG L SL Sbjct: 62 AFETELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSS 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ + PD TI LD+ IGL+R + R LD E++ + ++ R +L++A Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELA- 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 N + VD+ S + V +I N++ ++ Sbjct: 175 NDDNSIKTVDANQSIEHVHRDITNVLRTFFAEQ 207 >gi|91210252|ref|YP_540238.1| thymidylate kinase [Escherichia coli UTI89] gi|117623283|ref|YP_852196.1| thymidylate kinase [Escherichia coli APEC O1] gi|218557979|ref|YP_002390892.1| thymidylate kinase [Escherichia coli S88] gi|237706917|ref|ZP_04537398.1| thymidylate kinase [Escherichia sp. 3_2_53FAA] gi|331657160|ref|ZP_08358122.1| dTMP kinase [Escherichia coli TA206] gi|122424166|sp|Q1RD57|KTHY_ECOUT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221740|sp|A1A9Z2|KTHY_ECOK1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732656|sp|B7MJ85|KTHY_ECO45 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91071826|gb|ABE06707.1| thymidylate kinase [Escherichia coli UTI89] gi|115512407|gb|ABJ00482.1| thymidylate kinase [Escherichia coli APEC O1] gi|218364748|emb|CAR02438.1| thymidylate kinase [Escherichia coli S88] gi|226898127|gb|EEH84386.1| thymidylate kinase [Escherichia sp. 3_2_53FAA] gi|294493330|gb|ADE92086.1| thymidylate kinase [Escherichia coli IHE3034] gi|307627432|gb|ADN71736.1| thymidylate kinase [Escherichia coli UM146] gi|315287441|gb|EFU46852.1| thymidylate kinase [Escherichia coli MS 110-3] gi|315296640|gb|EFU55935.1| thymidylate kinase [Escherichia coli MS 16-3] gi|323953216|gb|EGB49082.1| thymidylate kinase [Escherichia coli H252] gi|323957922|gb|EGB53634.1| thymidylate kinase [Escherichia coli H263] gi|331055408|gb|EGI27417.1| dTMP kinase [Escherichia coli TA206] Length = 213 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGGFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTNWVKE 210 >gi|332162101|ref|YP_004298678.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318606150|emb|CBY27648.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica Y11] gi|325666331|gb|ADZ42975.1| thymidylate kinase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 212 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 113/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDTVVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGID 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + E PD T+ LDLP IGL R + R LD E++ + E+ R+ +L Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPVIGLARARAR------GELDRIEQESLAFFERTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A +D++ + V+ +I ++ + + R Sbjct: 174 KLAATDSS-IKTIDASQPLEQVSESISRVLKQWLTSR 209 >gi|206579513|ref|YP_002239283.1| thymidylate kinase [Klebsiella pneumoniae 342] gi|288936138|ref|YP_003440197.1| thymidylate kinase [Klebsiella variicola At-22] gi|290510808|ref|ZP_06550178.1| thymidylate kinase [Klebsiella sp. 1_1_55] gi|238057701|sp|B5XXH2|KTHY_KLEP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|206568571|gb|ACI10347.1| thymidylate kinase [Klebsiella pneumoniae 342] gi|288890847|gb|ADC59165.1| thymidylate kinase [Klebsiella variicola At-22] gi|289777524|gb|EFD85522.1| thymidylate kinase [Klebsiella sp. 1_1_55] Length = 213 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 113/214 (52%), Gaps = 11/214 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT L+ LQ +D+ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARQLVVETLQSAGIHDMVFTREPGGTVLAEKLRSLVLDIQSTGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L +L+ Sbjct: 65 INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ ++GL+R + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P VD+ +VA +I + + + ++ Sbjct: 179 AADPS-IRTVDATQPLDAVARDIRATIAQWMAEQ 211 >gi|323144741|ref|ZP_08079318.1| dTMP kinase [Succinatimonas hippei YIT 12066] gi|322415492|gb|EFY06249.1| dTMP kinase [Succinatimonas hippei YIT 12066] Length = 205 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 123/211 (58%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 SGLFI+FEG EGAGK+T I ++R+L+ K D REPGGT AE R +L + +E Sbjct: 2 SGLFITFEGTEGAGKSTLIKEIERWLREKEIDFVSVREPGGTVLAEKMRAILKTPSPEEK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++E ++ AAR VE +I+PAL +GK ++CDR S+ AYQG +D+++ Sbjct: 62 LCDKSELLLMYAARAQLVETLIKPALAQGKCVICDRHDLSTVAYQGGGRGLPMDEIDAVR 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ + PD T++LD+ +G++R ++R LD FE + + E+ R+ +LD A Sbjct: 122 NVALGKFRPDLTLLLDIDPKLGMQRARSR------GVLDRFELEQLSFFERVRKAYLDAA 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P ++D++ + V ++ + +L+ Sbjct: 176 KRLP-YIKVIDASKNVDEVRLAAISALEDLL 205 >gi|15643856|ref|NP_228905.1| thymidylate kinase [Thermotoga maritima MSB8] gi|8134526|sp|Q9X0I3|KTHY_THEMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|160286313|pdb|2Z0H|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|160286314|pdb|2Z0H|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|238828331|pdb|3HJN|A Chain A, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|238828332|pdb|3HJN|B Chain B, Crystal Structure Of Thymidylate Kinase In Complex With Dtdp And Adp From Thermotoga Maritima gi|4981644|gb|AAD36175.1|AE001769_5 thymidylate kinase [Thermotoga maritima MSB8] Length = 197 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 15/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL ++L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILL---EEEVTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R V I+ L EG +L DR+ DSS AYQG + ++ L + + Sbjct: 58 KAELFLFLASRNLLVTE-IKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ LKR L+ FE++ E+ R+ +L +AR Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKR--EFLERVREGYLVLAREH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P+R ++D S + + +++ V Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVKR 191 >gi|52424624|ref|YP_087761.1| thymidylate kinase [Mannheimia succiniciproducens MBEL55E] gi|59798189|sp|Q65V34|KTHY_MANSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52306676|gb|AAU37176.1| Tmk protein [Mannheimia succiniciproducens MBEL55E] Length = 214 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 115/217 (52%), Gaps = 11/217 (5%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS 56 MN G FI EG+EGAGKTT + L D+ TREPGGTP AE R+++ Sbjct: 1 MNKNMNGKFIVLEGLEGAGKTTARQAVVEQLNALGITDLLFTREPGGTPLAEKLRNLIKY 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG Sbjct: 61 ETEEPVTDKAELLMLYAARIQLVENVIKPALAQGKWVIGDRHDLSSQAYQGGGRQIDSHL 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L++ + + PD T+ LDL IGL R + R LD E++++ ++ R Sbjct: 121 LETLKKTVLGDFEPDFTLYLDLSPAIGLARARGR------GELDRIEQQNLAFFDRTRTR 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +L++ ++ P + I+++ S + V +I V V Sbjct: 175 YLELVKDNP-KAVIINAEQSIERVTADIKTAVKNWVN 210 >gi|86749796|ref|YP_486292.1| thymidylate kinase [Rhodopseudomonas palustris HaA2] gi|86572824|gb|ABD07381.1| thymidylate kinase [Rhodopseudomonas palustris HaA2] Length = 246 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 4/210 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I LL + L++ + VTREPGG+P AE RH+LL+ G Sbjct: 13 GHFITFEGGEGAGKSTQIRLLAQRLEKAGLETLVTREPGGSPGAEIIRHLLLAGVGRAIG 72 Query: 64 -AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEAEA++FAAAR DHV +I+PAL G +LCDRF DS+ YQG L++LQ+ Sbjct: 73 GAEAEALLFAAARDDHVRTLIQPALDRGVWVLCDRFYDSTRVYQGRLGDVSPGMLNALQD 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ + PD T+ILD+PV+IGL R R R S D FE +++ H + R + IAR Sbjct: 133 VTIGTMKPDLTVILDVPVEIGLARAAVR---RGSDAPDRFESENIDFHRRLRDAYRQIAR 189 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+RC +VD+ + VA I V E + Sbjct: 190 AEPERCVLVDAHAEPKVVADRIWLTVQERL 219 >gi|294676800|ref|YP_003577415.1| thymidylate kinase [Rhodobacter capsulatus SB 1003] gi|294475620|gb|ADE85008.1| thymidylate kinase [Rhodobacter capsulatus SB 1003] Length = 206 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 112/211 (53%), Gaps = 6/211 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T LL L DV TREPGG+P AE R ++L D + A Sbjct: 1 MFITFEGIDGSGKSTQARLLAEALAGLGRDVIRTREPGGSPGAEEIRALVLQGDPDRWSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E ++F AAR DH+E I PAL G++++CDRF DS+ YQG +D L + Sbjct: 61 KTEILLFTAARRDHLERTIAPALAAGQVVICDRFADSTRMYQGLSRGDLRGLVDDLHRLM 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T ++D+ +GL R + R E FE + + + R FL +++ Sbjct: 121 IGR-EPDLTFLIDIDPAVGLARAKGRQGHEE-----RFEDMGLAMQVRMRAGFLALSQEF 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R +++ +VA +L++ ++ R Sbjct: 175 SSRFKVIEGDRRPDAVAAEVLDVTLAALRAR 205 >gi|262043203|ref|ZP_06016339.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039481|gb|EEW40616.1| dTMP kinase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 213 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT L+ LQ +D+ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARQLVVETLQSAGIHDLVFTREPGGTILAEKLRSLVLDIQSTGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G+ ++ DR S+ AYQG L +L+ Sbjct: 65 INDKAEVLMFYAARVQLVETVIKPALARGQWVIGDRHDLSTQAYQGGGRGIDRTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + P+ T+ LD+ ++GL+R + R LD E++ + + R +L++A Sbjct: 125 DAVLGDFRPNLTLYLDVTPEVGLQRARAR------GELDRIEQESMNFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P VD+ +VA +I + + + ++ + Sbjct: 179 AADPS-IRTVDATQPLDAVARDIRATIAQWMAEQAA 213 >gi|113475256|ref|YP_721317.1| thymidylate kinase [Trichodesmium erythraeum IMS101] gi|123352459|sp|Q115I0|KTHY_TRIEI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110166304|gb|ABG50844.1| thymidylate kinase [Trichodesmium erythraeum IMS101] Length = 225 Score = 238 bits (609), Expect = 4e-61, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 111/212 (52%), Gaps = 22/212 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN-------------YDVHVTREPGGTPAAEAA 50 G FI FEG+EG GKTT I LL+ +L +V +TREPGGT +A Sbjct: 3 GKFIVFEGVEGGGKTTQIELLQDWLLETGESRQILPKSIDLDLEVVITREPGGTKLGKAL 62 Query: 51 RHVLLSCG--VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 R +LLS ++ +E +++AA R H+E +I+P L G I+LCDRF+DS+ AYQG Sbjct: 63 RELLLSPDVLAEKIQETSELLLYAADRAQHIEALIKPCLERGTIVLCDRFIDSTIAYQGY 122 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + L I+ + D T LD+ V+IGL R ++R + D E+ ++ Sbjct: 123 GRGLDVELIKQLNYIATGGLKSDLTFWLDIDVEIGLARAKSRGNF------DRMEQANIE 176 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200 H + +Q + ++A+N +D+ + + V Sbjct: 177 FHRRVQQGYQELAKNNSL-IVRIDANLTREKV 207 >gi|295397256|ref|ZP_06807352.1| thymidylate kinase [Aerococcus viridans ATCC 11563] gi|294974503|gb|EFG50234.1| thymidylate kinase [Aerococcus viridans ATCC 11563] Length = 219 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 68/208 (32%), Positives = 113/208 (54%), Gaps = 4/208 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G FI+ EG +GAGKTT I L L+ K + +TREPGG P AE R V+LS Sbjct: 7 AGKFITVEGPDGAGKTTLIQGLTAKLEEKLAVPLKLTREPGGDPIAEQIREVILSPENVA 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA+R H+ + + PAL G ++LCDRF+DSS AYQG + ++ Sbjct: 67 LDPRAEALLYAASRRQHLVHTVLPALEAGHMVLCDRFVDSSIAYQGYGREIGEEGIIAIN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ LD+ + G++R+Q S E + + + + H++ + + + Sbjct: 127 QFATDGRQPDLTLYLDITAEEGIRRIQANRSQAEQ---NRLDVEAIDFHQRVHKGYGVLK 183 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 P+R ++D+ +S+ + L I+ Sbjct: 184 DRFPERIQVIDATQDPESMQRDALAILE 211 >gi|83858301|ref|ZP_00951823.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633] gi|83853124|gb|EAP90976.1| thymidylate kinase [Oceanicaulis alexandrii HTCC2633] Length = 211 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EGAGKTT L L+ + +TREPGGTP AEA R++L+ + Sbjct: 1 MTQGRFITLEGGEGAGKTTLAKALSESLESQGVRTLITREPGGTPNAEALRNLLVEGDTE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +E ++ AAR+DHVE +IRP+L +G ++CDRF DS+ AYQG +D + Sbjct: 61 RWSALSETLLLYAARVDHVERLIRPSLDQGIWVICDRFSDSTRAYQGAAGGMSTAQIDEI 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S+ PD T ++DL + GL+R + R FERK H R FLDI Sbjct: 121 DRASMHGFGPDLTFVVDLDPETGLERTRLR-----GEGATRFERKPAAFHHALRVAFLDI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 AR P+RC ++D A VAT+ I+ + + Sbjct: 176 ARAAPERCVVLDGAMPADQVATSAFEILTQRL 207 >gi|269102268|ref|ZP_06154965.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP 102761] gi|268162166|gb|EEZ40662.1| thymidylate kinase [Photobacterium damselae subsp. damselae CIP 102761] Length = 209 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 120/217 (55%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G FI EG+EGAGK+T IS + L +D TREPGGTP AE R ++ Sbjct: 1 MN-GKFIVIEGLEGAGKSTAISQVINVLAEHGIHDPVATREPGGTPLAEQMRALVKEGHP 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE AE ++ AAR+ V+NVI+PAL +G+ ++ DR SS AYQG + + Sbjct: 60 DEPLTDMAELLLLYAARIQLVDNVIKPALAQGRWVVGDRHDMSSQAYQGGGRGFEQQLMM 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L+ + + PD TI +D+ +GL+R + R LD E+ ++ + R FL Sbjct: 120 NLRNTVLGDFCPDFTIYMDIDPALGLQRARGR------GALDRIEQMNIDFFHRARARFL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +++ P+ I+D++ S ++V +I + + + ++++ Sbjct: 174 ELSEQDPNT-VIIDASQSLEAVTADISSALTQWLEQQ 209 >gi|261403890|ref|YP_003240131.1| thymidylate kinase [Paenibacillus sp. Y412MC10] gi|261280353|gb|ACX62324.1| thymidylate kinase [Paenibacillus sp. Y412MC10] Length = 214 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 6/216 (2%) Query: 1 MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 MN LFI+ EG EG+GKTT + L F+Q + +TREPGG AE R ++L Sbjct: 1 MNNRRPLFITVEGGEGSGKTTMMGRLAAFMQNHSIPYLITREPGGIDIAEKIRSIILDPE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 A EA+++AAAR H+ + PAL +G +LCDRF+DSS YQG + Sbjct: 61 HTAMDARTEALLYAAARRQHLVEKVEPALRQGLTVLCDRFVDSSLVYQGYARGLGMEEVW 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 S+ + ++ MPD T++ D+ IGL R+ + + +++ HEK R+ +L Sbjct: 121 SINQFAIDTRMPDLTLLFDIEPRIGLSRIAANAE----REWNRLDMENLTFHEKVREGYL 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A PDR IVD++ + V + + + + K Sbjct: 177 LVAERNPDRIRIVDASKTPAQVEREMNRHLEDAILK 212 >gi|167738165|ref|ZP_02410939.1| thymidylate kinase [Burkholderia pseudomallei 14] gi|167815351|ref|ZP_02447031.1| thymidylate kinase [Burkholderia pseudomallei 91] gi|167893848|ref|ZP_02481250.1| thymidylate kinase [Burkholderia pseudomallei 7894] gi|167902298|ref|ZP_02489503.1| thymidylate kinase [Burkholderia pseudomallei NCTC 13177] gi|167910539|ref|ZP_02497630.1| thymidylate kinase [Burkholderia pseudomallei 112] gi|167918566|ref|ZP_02505657.1| thymidylate kinase [Burkholderia pseudomallei BCC215] gi|254179465|ref|ZP_04886064.1| thymidylate kinase [Burkholderia pseudomallei 1655] gi|254297346|ref|ZP_04964799.1| thymidylate kinase [Burkholderia pseudomallei 406e] gi|157807497|gb|EDO84667.1| thymidylate kinase [Burkholderia pseudomallei 406e] gi|184210005|gb|EDU07048.1| thymidylate kinase [Burkholderia pseudomallei 1655] Length = 206 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 13/215 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLS 56 M G FI+FEGI+GAGKTTH+ LQ + V VTREPGGT E R +LL+ Sbjct: 1 MARGKFITFEGIDGAGKTTHLQWFCDRLQERLGPTGRHVVVTREPGGTQLGETLREILLN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA++ A R +H+ VI PAL G ++ DRF D+++AYQG Sbjct: 61 Q---PMDLETEALLMFAGRREHLALVIEPALARGDWVVSDRFTDATFAYQGGGRGLPRDK 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++L+ PD T++ D+ + R + D FE + + R Sbjct: 118 LEALERWVQGGFQPDLTVLFDVQPQVASARRGA------ARMPDKFESESDAFFARTRAE 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L A P R IVDS+ S + + ++ L Sbjct: 172 YLRRAHEAPHRFAIVDSSESIPQIRKRLEGVLAAL 206 >gi|162446997|ref|YP_001620129.1| thymidylate kinase [Acholeplasma laidlawii PG-8A] gi|189028826|sp|A9NEH3|KTHY_ACHLI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|161985104|gb|ABX80753.1| thymidylate kinase [Acholeplasma laidlawii PG-8A] Length = 201 Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats. Identities = 75/208 (36%), Positives = 116/208 (55%), Gaps = 7/208 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG+GKTT I LK L K YDV TREPGG+ AE R VLL E A Sbjct: 1 MFITFEGGEGSGKTTLIEKLKHTLLEKKYDVLTTREPGGSKVAEKIRSVLLDNKNTEITA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA+R H++ VI P L K++LCDR++DSSYAYQ + F+ S+ + Sbjct: 61 HTEALLFAASRAQHLDEVIIPNLD--KVILCDRYIDSSYAYQAFGRNLGMEFVQSINSYA 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ + PD T +DL G+ RV+ + D + + H+K R+ ++ I+ Sbjct: 119 LKYL-PDLTFYIDLDPKTGIDRVKKNRLHK----TDRLDMEVQTFHQKVREGYIRISEMF 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 +R ++D S ++ I++ + + + Sbjct: 174 KERIVVIDGNQSIDAIYQIIMDNILKRL 201 >gi|225351239|ref|ZP_03742262.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225158695|gb|EEG71937.1| hypothetical protein BIFPSEUDO_02831 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 219 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 12/215 (5%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---S 56 MN G+FISFEG++G GKTT + L+ +++ + + VTREPGGT A R +LL Sbjct: 1 MNMQGIFISFEGVDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLGGVE 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AEA++FAA R HV VIRPAL G +++ DR+LDSS AYQ Sbjct: 61 GSDADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQAGGRELTAGE 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L + E++P+ T +LDL R+Q+ D E + RQ Sbjct: 121 IRDLSMWATCELLPNRTYLLDLDPVQSHARLQH--------DEDRMESAGNDFQRRTRQA 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 FLD+A+ + R ++D++ S V ++I + ++ Sbjct: 173 FLDLAKAESQRFRVIDASQSIDEVWSHIQDDFAQI 207 >gi|217967176|ref|YP_002352682.1| dTMP kinase [Dictyoglomus turgidum DSM 6724] gi|217336275|gb|ACK42068.1| dTMP kinase [Dictyoglomus turgidum DSM 6724] Length = 207 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 115/210 (54%), Gaps = 11/210 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + LFI+FEGI+G+GKTT LLK + K Y VH+TREPGGT R +LL+ Sbjct: 1 MKNNLFITFEGIDGSGKTTQALLLKEHFESKGYKVHLTREPGGTDVGNKIREILLNPAFS 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA ++ A+R+++ N+I+ L E +++C+R+ DS+ AYQG + L + Sbjct: 61 -INYWTEAFLYLASRVENTINIIK-KLKENYVVICERYADSTLAYQGYGRNLPLELLVEM 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ + P+ TI++DL ++ L+R + D ER+++ + K R+ +L+I Sbjct: 119 NQIATFGLKPNLTILIDLDPELALRRKK---------SFDRIERENIEFYYKVRKGYLEI 169 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ + +R I+ S + I+ + Sbjct: 170 AKKEKERFIIIPGDLSKGEIFKRIVEEIER 199 >gi|255017566|ref|ZP_05289692.1| thymidylate kinase [Listeria monocytogenes FSL F2-515] Length = 208 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKNEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + + Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R VD+ + + + IL + + Sbjct: 176 INMFPERFMRVDATKTPEEITETILADILRQL 207 >gi|187928511|ref|YP_001898998.1| thymidylate kinase [Ralstonia pickettii 12J] gi|229470189|sp|B2UBZ3|KTHY_RALPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187725401|gb|ACD26566.1| dTMP kinase [Ralstonia pickettii 12J] Length = 205 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + LQ K V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A+R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFASRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L+ Q + P TI+ DL +I R+ ++ D FE + + R +L Sbjct: 119 ALEHWVQQGLQPTKTILFDLAPEIAAARLA------DARTPDKFEAESAQFFLRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +PDR ++++ + ++ N++ L Sbjct: 173 RRAAAEPDRFVVLNANRERSDIQKDLENLLATL 205 >gi|212716794|ref|ZP_03324922.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM 16992] gi|212660498|gb|EEB21073.1| hypothetical protein BIFCAT_01733 [Bifidobacterium catenulatum DSM 16992] Length = 217 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 11/212 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---SCGV 59 G+FISFEGI+G GKTT + L+ +++ + + VTREPGGT A R +LL Sbjct: 2 QGIFISFEGIDGVGKTTQVERLRAYVEAQGRECVVTREPGGTVLGVAIRKLLLGGVEGSD 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AEA++FAA R HV VIRPAL G +++ DR+LDSS AYQ + Sbjct: 62 ADIAPRAEALLFAADRAQHVAEVIRPALERGAVVITDRYLDSSLAYQAGGRELTAGEIRD 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + E++P+ T +LDL R+Q+ D E + RQ FLD Sbjct: 122 LSMWATCELLPNRTYLLDLDPVQSHARLQH--------DEDRMESAGNDFQRRTRQAFLD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +A+ + R ++D++ S V ++I + ++ Sbjct: 174 LAKAESQRFRVIDASQSIDEVWSHIQDDFAQI 205 >gi|328543898|ref|YP_004304007.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1] gi|326413642|gb|ADZ70705.1| Thymidylate kinase [Polymorphum gilvum SL003B-26A1] Length = 231 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 91/195 (46%), Positives = 121/195 (62%), Gaps = 2/195 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T I L L DV VTREPGG+P AE R +LLS G Sbjct: 2 QGRFITFEGGEGAGKSTQIRRLHDRLAALGIDVVVTREPGGSPGAEFIRDLLLSGGARGL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G EA++FAAAR DHV+ IRPAL GK +LCDRF DS+ YQGE L L+ Sbjct: 62 GPRGEAMLFAAARADHVDATIRPALEAGKWVLCDRFADSTRVYQGEA-GVDAHLLGLLET 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ PD T+++D+P D+GLKRV R + D FE + + +HE+RR +FL++A Sbjct: 121 AATLDLRPDLTVLIDVPADVGLKRVAARSRNAGADRGPDRFEDEALGVHERRRALFLELA 180 Query: 182 RNQPDRCHIVDSAHS 196 R++P+R IVD + Sbjct: 181 RDEPERIRIVDGSGD 195 >gi|54294285|ref|YP_126700.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens] gi|81601377|sp|Q5WWU9|KTHY_LEGPL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53754117|emb|CAH15590.1| hypothetical protein lpl1350 [Legionella pneumophila str. Lens] gi|307610103|emb|CBW99644.1| hypothetical protein LPW_14121 [Legionella pneumophila 130b] Length = 212 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 8/215 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL G+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+ LD+ ++G+ R ++R D E++ + + + + Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHILV 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P+ ++D+ S + V ++I +++ E ++ + Sbjct: 179 KQNPE-IMMIDANRSLEEVQSSIQSVIEEFIEHNL 212 >gi|15923472|ref|NP_371006.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50] gi|15926159|ref|NP_373692.1| thymidylate kinase [Staphylococcus aureus subsp. aureus N315] gi|49482709|ref|YP_039933.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA252] gi|57651363|ref|YP_185412.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL] gi|82750189|ref|YP_415930.1| thymidylate kinase [Staphylococcus aureus RF122] gi|87162349|ref|YP_493168.1| thymidylate kinase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194238|ref|YP_499030.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148266940|ref|YP_001245883.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH9] gi|150392986|ref|YP_001315661.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1] gi|156978810|ref|YP_001441069.1| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu3] gi|221142326|ref|ZP_03566819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|253315924|ref|ZP_04839137.1| thymidylate kinase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253730948|ref|ZP_04865113.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|255005275|ref|ZP_05143876.2| thymidylate kinase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|262049967|ref|ZP_06022826.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30] gi|262052513|ref|ZP_06024710.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3] gi|269202101|ref|YP_003281370.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98] gi|284023491|ref|ZP_06377889.1| thymidylate kinase [Staphylococcus aureus subsp. aureus 132] gi|294850341|ref|ZP_06791074.1| thymidylate kinase [Staphylococcus aureus A9754] gi|295407370|ref|ZP_06817167.1| thymidylate kinase [Staphylococcus aureus A8819] gi|295427016|ref|ZP_06819653.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16] gi|296276563|ref|ZP_06859070.1| thymidylate kinase [Staphylococcus aureus subsp. aureus MR1] gi|297246450|ref|ZP_06930290.1| thymidylate kinase [Staphylococcus aureus A8796] gi|54037703|sp|P65249|KTHY_STAAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|54041417|sp|P65248|KTHY_STAAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56749045|sp|Q6GJI9|KTHY_STAAR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920829|sp|Q5HIJ5|KTHY_STAAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122540513|sp|Q2G230|KTHY_STAA8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123487157|sp|Q2FJG0|KTHY_STAA3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123548600|sp|Q2YVW3|KTHY_STAAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166223118|sp|A7WYM2|KTHY_STAA1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030842|sp|A6TYV6|KTHY_STAA2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030843|sp|A5IQ34|KTHY_STAA9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|93279034|pdb|2CCJ|A Chain A, Crystal Structure Of S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate gi|93279035|pdb|2CCJ|B Chain B, Crystal Structure Of S. Aureus Thymidylate Kinase Complexed With Thymidine Monophosphate gi|93279036|pdb|2CCK|A Chain A, Crystal Structure Of Unliganded S. Aureus Thymidylate Kinase gi|93279037|pdb|2CCK|B Chain B, Crystal Structure Of Unliganded S. Aureus Thymidylate Kinase gi|13700372|dbj|BAB41670.1| tmk [Staphylococcus aureus subsp. aureus N315] gi|14246250|dbj|BAB56644.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus Mu50] gi|49240838|emb|CAG39505.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus MRSA252] gi|57285549|gb|AAW37643.1| thymidylate kinase [Staphylococcus aureus subsp. aureus COL] gi|82655720|emb|CAI80119.1| thymidylate kinase [Staphylococcus aureus RF122] gi|87128323|gb|ABD22837.1| thymidylate kinase [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201796|gb|ABD29606.1| thymidylate kinase [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147740009|gb|ABQ48307.1| thymidylate kinase [Staphylococcus aureus subsp. aureus JH9] gi|149945438|gb|ABR51374.1| dTMP kinase [Staphylococcus aureus subsp. aureus JH1] gi|156720945|dbj|BAF77362.1| thymidylate kinase homologue [Staphylococcus aureus subsp. aureus Mu3] gi|253725298|gb|EES94027.1| dTMP kinase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|259159560|gb|EEW44607.1| hypothetical protein SA930_1934 [Staphylococcus aureus 930918-3] gi|259161902|gb|EEW46485.1| hypothetical protein SAD30_0195 [Staphylococcus aureus D30] gi|262074391|gb|ACY10364.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED98] gi|269940053|emb|CBI48429.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus TW20] gi|283469774|emb|CAQ48985.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ST398] gi|285816181|gb|ADC36668.1| Thymidylate kinase [Staphylococcus aureus 04-02981] gi|294822765|gb|EFG39201.1| thymidylate kinase [Staphylococcus aureus A9754] gi|294967727|gb|EFG43759.1| thymidylate kinase [Staphylococcus aureus A8819] gi|295129019|gb|EFG58648.1| thymidylate kinase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297176637|gb|EFH35899.1| thymidylate kinase [Staphylococcus aureus A8796] gi|298693811|gb|ADI97033.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ED133] gi|302750372|gb|ADL64549.1| putative thymidylate kinase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|312828977|emb|CBX33819.1| thymidylate kinase [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128606|gb|EFT84609.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS03] gi|315193841|gb|EFU24235.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS00] gi|315196161|gb|EFU26517.1| thymidylate kinase [Staphylococcus aureus subsp. aureus CGS01] gi|323438403|gb|EGA96161.1| thymidylate kinase [Staphylococcus aureus O11] gi|323441265|gb|EGA98936.1| thymidylate kinase [Staphylococcus aureus O46] gi|329313200|gb|AEB87613.1| Thymidylate kinase [Staphylococcus aureus subsp. aureus T0131] gi|329725071|gb|EGG61566.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21172] gi|329729774|gb|EGG66171.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21189] gi|329731077|gb|EGG67449.1| dTMP kinase [Staphylococcus aureus subsp. aureus 21193] Length = 205 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I+ + L K+YDV +TREPGG P E R ++L ++ Sbjct: 4 FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL EGK++LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI L++ ++G +R+ ++ S + +++D+ HEK + + +I N+ Sbjct: 121 NGLYPDLTIYLNVSAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNES 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R V++ ++V + + + ++K Sbjct: 176 QRFKSVNADQPLENVVEDTYQTIIKYLEK 204 >gi|94970254|ref|YP_592302.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345] gi|94552304|gb|ABF42228.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345] Length = 217 Score = 238 bits (608), Expect = 5e-61, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 2/212 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++FEG++G GK+T + +L L+R DV TREPGGTP E R V+L Sbjct: 5 RGKFLTFEGLDGCGKSTQMEMLAEVLRRDGIDVVTTREPGGTPTGEKIRSVILDSKTRFL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + AAR H+ +++P+L G+ +LCDRF DSS AYQG + + + Sbjct: 65 HPMAELALMFAARAQHIAEIVQPSLEAGRWVLCDRFTDSSEAYQGGGRQMGSQLILDMHK 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDI 180 I ++ P+ TI++D + + R + R + +D FER+ + ++ R + I Sbjct: 125 IVCGDLWPEMTILMDSDPEASVARARRRNRANATDGVDENRFEREKIEFFQRVRDAYNAI 184 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +P R + VD+ S I+ V E + Sbjct: 185 ADREPQRVYKVDARRSKDVTHPEIVRAVRERM 216 >gi|237731030|ref|ZP_04561511.1| thymidylate kinase [Citrobacter sp. 30_2] gi|226906569|gb|EEH92487.1| thymidylate kinase [Citrobacter sp. 30_2] Length = 213 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAKGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +D+ ++V +I + + + V+++ + Sbjct: 179 AKDTS-IRTIDATQPLEAVMADIRHTITQWVKEQGA 213 >gi|116333253|ref|YP_794780.1| thymidylate kinase [Lactobacillus brevis ATCC 367] gi|122270059|sp|Q03SS3|KTHY_LACBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116098600|gb|ABJ63749.1| thymidylate kinase [Lactobacillus brevis ATCC 367] Length = 214 Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 4/212 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FISFEG +GAGKT+ + + ++ + +TREPGG P +E+ R ++L Sbjct: 2 SGTFISFEGPDGAGKTSALQAITTQIKPVLGDQLVITREPGGNPISESIRAIILDRANTA 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AAAR H+ I PAL K++LCDR++DSS AYQG + + Sbjct: 62 MDYRTEALLYAAARRQHLAQTILPALAADKLVLCDRYVDSSVAYQGAGRQIGEDAVAQMN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P T+ D+P +IGL+R+Q R+ +D + + H++ R +L + Sbjct: 122 TFATDGLLPAVTVYFDVPAEIGLRRIQA---HRDPQKVDRLDVEQAAFHDRVRAAYLRLQ 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 PDR ++D+ ++V T L ++ + Q Sbjct: 179 AAHPDRIKLIDATQKREAVVTTALTLIKQAAQ 210 >gi|255262414|ref|ZP_05341756.1| thymidylate kinase [Thalassiobium sp. R2A62] gi|255104749|gb|EET47423.1| thymidylate kinase [Thalassiobium sp. R2A62] Length = 208 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 9/209 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEGI+G+GK+T +L L +TREPGG+ AE R +LLS D + Sbjct: 5 GHFITFEGIDGSGKSTQARMLVDRL---GAQTLLTREPGGSEGAEEIRGLLLSGDTDRWS 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE E ++F AAR DH+E I PAL G ++ DRF DS+ YQG +D L + Sbjct: 62 AETEILLFTAARRDHLEKTIEPALAAGTTVISDRFADSTRVYQGATRGDLRATVDQLHTL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T I+D+ I LKR R + D FE + E R FL +AR+ Sbjct: 122 MI-GREPDLTFIIDMDPAIALKRGLARET-----GEDRFEDFGLAFQETLRHGFLALARD 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+RC ++D + + VA+ + + + Sbjct: 176 MPNRCVVIDGNRTPEQVASEVAAHAMDAL 204 >gi|52841629|ref|YP_095428.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|59798153|sp|Q5ZVP1|KTHY_LEGPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|52628740|gb|AAU27481.1| thymidylate kinase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 212 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 8/215 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTKIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL G+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMDMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+ LD+ ++G+ R ++R D E++ + + + + Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHILV 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P+ ++D+ S + V ++I +++ E ++ + Sbjct: 179 KQNPE-IIMIDANRSLEEVQSSIQSVIEEFIEHNL 212 >gi|227111684|ref|ZP_03825340.1| thymidylate kinase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 219 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 73/206 (35%), Positives = 111/206 (53%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT +++ L+ DV TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKDVVFTREPGGTPLAEKLRELIKQGIA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ V+NVI+PAL G ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALANGNWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R + R LD E++ + ++ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRSRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 ++A D +D++ +V+ +I Sbjct: 174 ELAAED-DSILTIDASQPIDAVSADI 198 >gi|26247240|ref|NP_753280.1| thymidylate kinase [Escherichia coli CFT073] gi|227886546|ref|ZP_04004351.1| thymidylate kinase [Escherichia coli 83972] gi|300974436|ref|ZP_07172613.1| thymidylate kinase [Escherichia coli MS 45-1] gi|301051116|ref|ZP_07197949.1| thymidylate kinase [Escherichia coli MS 185-1] gi|31563157|sp|Q8FIN9|KTHY_ECOL6 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|26107641|gb|AAN79840.1|AE016759_114 Thymidylate kinase [Escherichia coli CFT073] gi|227836750|gb|EEJ47216.1| thymidylate kinase [Escherichia coli 83972] gi|300297242|gb|EFJ53627.1| thymidylate kinase [Escherichia coli MS 185-1] gi|300410570|gb|EFJ94108.1| thymidylate kinase [Escherichia coli MS 45-1] gi|307553099|gb|ADN45874.1| thymidylate kinase [Escherichia coli ABU 83972] gi|315291041|gb|EFU50404.1| thymidylate kinase [Escherichia coli MS 153-1] Length = 213 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + V PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGGVRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTNWVKE 210 >gi|323340134|ref|ZP_08080398.1| dTMP kinase [Lactobacillus ruminis ATCC 25644] gi|323092325|gb|EFZ34933.1| dTMP kinase [Lactobacillus ruminis ATCC 25644] Length = 210 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 113/207 (54%), Gaps = 5/207 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +FI+FEG +G+GKT+ I + + L++ + +TREPGG +EA R+V+L E Sbjct: 1 MFITFEGTDGSGKTSVIKAIVKELEKNGKTEYVLTREPGGNRISEAIRNVILDERFVEMD 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA+++AAAR H+ I PAL GK++LCDRF+DSS YQG S + + Sbjct: 61 ERTEALLYAAARRQHIVETINPALSAGKLVLCDRFVDSSIVYQGAGRSIGTDRIAEMNRF 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI LD+ ++GL+R++ R E ++ + + + + +L++A Sbjct: 121 ATDGLTPDLTIFLDIEPELGLERIR-RNRQDE---VNRLDHEKMSFYRTVHDAYLELATK 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 R VD++ ++V + I+ + Sbjct: 177 DSKRIVEVDASQPLEAVIFEVREILKK 203 >gi|114565616|ref|YP_752770.1| dTMP kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114336551|gb|ABI67399.1| thymidylate kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 210 Score = 238 bits (607), Expect = 6e-61, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 9/214 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GLFIS EGI+G GKT+ L ++ + + V REPGGT +E R +LL E Sbjct: 3 NKGLFISLEGIDGCGKTSVKEGLLQYFSK--FPVLSIREPGGTLISEKIREILLDEKNQE 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA ++AAAR VE +IRPAL++GKI+L DR+LDS+ AYQG FL +L Sbjct: 61 ITARTEAFLYAAARSQLVEELIRPALLQGKIVLADRYLDSTIAYQGYGRGLDLGFLTTLN 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + P T++LD+ G +R + D E++ + + R+ +L IA Sbjct: 121 QLCTSGLKPHLTLLLDIDPAEGQRRKKK-------DIPDRLEKEGIEFQSRVREGYLKIA 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R + +R ++D+ F+ V + + ++ R Sbjct: 174 RQESERIKLLDAGKDFKEVLQEAIEYIEDIWPAR 207 >gi|170768049|ref|ZP_02902502.1| thymidylate kinase [Escherichia albertii TW07627] gi|170122815|gb|EDS91746.1| thymidylate kinase [Escherichia albertii TW07627] Length = 213 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ +D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIHDMIFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +L++A H +D+ +V I V V+++ + Sbjct: 174 YLELAAQD-RSIHTIDATQPLDAVMDAIRTTVTNWVKEQGA 213 >gi|50365491|ref|YP_053916.1| thymidylate kinase [Mesoplasma florum L1] gi|59798247|sp|Q6F0E1|KTHY_MESFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|50364047|gb|AAT76032.1| thymidylate kinase [Mesoplasma florum L1] Length = 211 Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 118/209 (56%), Gaps = 5/209 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG++G+GKTT + +K++L+ NY V +TREPGG P +E R ++L+ Sbjct: 1 MFITIEGMDGSGKTTALQRVKQYLEDLNYKVVMTREPGGLPLSEKIRELILNKDGVGMEP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++F AAR +H+E VI+P L +G I++ DRF+DS+ AYQG +L+ LQ+ Sbjct: 61 WTEALLFIAARKEHLEKVIKPYLKKGYIVISDRFMDSTTAYQGGARGLGVDYLNELQKNI 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ +PD T+ +L + KR+ R + + + + E + F ++ + Sbjct: 121 LEGFLPDLTLYFELSFEDAEKRLSARPEEK-----NRLDEEGRKFKEAVKLAFEELVVKE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R ++D++ S + V ++ E ++ Sbjct: 176 PNRITVIDASKSPEEVFEETKKVILEKIE 204 >gi|301155188|emb|CBW14652.1| thymidylate kinase [Haemophilus parainfluenzae T3T1] Length = 210 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK+T + + L+ D+ TREPGGTP AE RH++ + Sbjct: 2 QGKFIVIEGLEGAGKSTAMQTVVDTLKSLGVNDIVFTREPGGTPLAEKLRHLIKHETAEL 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PAL EGKI+L DR SS AYQG + +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALAEGKIVLGDRHDMSSQAYQGGGRQFDQTLMANLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD + LD+ GL R + R LD E++ + + RQ +L++ Sbjct: 122 NMVLGDFEPDFVLYLDIDPAEGLARARGR------GELDRIEQQGLDFFHRTRQRYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +N P + I+++ + V +I + V Sbjct: 176 QNNP-KAAIINAGQALAQVQADIQSAVKSW 204 >gi|296102884|ref|YP_003613030.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057343|gb|ADF62081.1| thymidylate kinase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 213 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 114/219 (52%), Gaps = 12/219 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L+ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVIETLKTLGVADMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL GK ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDQTM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESLDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++A +D+ S + V +I V +Q++ Sbjct: 174 YLELASQDSS-IRTIDATQSLEEVTRSIEETVKHWLQEQ 211 >gi|116747846|ref|YP_844533.1| dTMP kinase [Syntrophobacter fumaroxidans MPOB] gi|116696910|gb|ABK16098.1| thymidylate kinase [Syntrophobacter fumaroxidans MPOB] Length = 222 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 5/208 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F++FEGI+G GK+T I L +L R TREPGGT E R +LL Sbjct: 17 KFVTFEGIDGCGKSTLIDELASWLDRTRVPYVKTREPGGTSLGEKIRGLLLDPAHRGMNR 76 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E +++ A+R V +I PAL G +L DR++D++ AYQG L LQ + Sbjct: 77 QTEVLLYTASRAQLVAEIILPALKSGAWVLADRYIDATLAYQGYGRELDPDPLRRLQHWA 136 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q ++PD T++LD +D R+ R D E ++ HE+ + +LD+A Sbjct: 137 TQALVPDKTVLLDCGIDTAAARMSARNH-----RPDRIEMEERAFHERVKAGYLDLASLD 191 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D+ V + E+V Sbjct: 192 PGRFIVLDAEKPLPEVIADFRAAFREIV 219 >gi|6729847|pdb|4TMK|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate Inhibitor Tp5a gi|6729850|pdb|5TMP|A Chain A, Complex Of E. Coli Thymidylate Kinase With The Bisubstrate Inhibitor Aztp5a Length = 213 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R +LL Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|329942859|ref|ZP_08291638.1| thymidylate kinase [Chlamydophila psittaci Cal10] gi|313848031|emb|CBY17029.1| thymidylate kinase [Chlamydophila psittaci RD1] gi|325507234|gb|ADZ18872.1| thymidylate kinase [Chlamydophila psittaci 6BC] gi|328815119|gb|EGF85108.1| thymidylate kinase [Chlamydophila psittaci Cal10] gi|328914700|gb|AEB55533.1| thymidylate kinase [Chlamydophila psittaci 6BC] Length = 207 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 108/209 (51%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + +V TREPGG+ E R +L E Sbjct: 1 MFIVIEGCEGSGKSSLTQLLKDKLMAEGKEVVATREPGGSSLGERVRDWILDPSTTEISP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F AAR H+ I PAL GKI++CDRF DS+ YQG ++ +L Sbjct: 61 YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V E ++P+ T +LD+P D GLKR Q + S D FE K + H K R+ FL +A Sbjct: 121 VGEKKILPNLTCLLDIPADEGLKRKQQQKSF------DKFENKSLAYHTKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++PD ++D+ + ++ EL Sbjct: 175 SRPDSYLVLDARQPIEESLNKVMTAYTEL 203 >gi|268589221|ref|ZP_06123442.1| dTMP kinase [Providencia rettgeri DSM 1131] gi|291315477|gb|EFE55930.1| dTMP kinase [Providencia rettgeri DSM 1131] Length = 209 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 117/216 (54%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M + FI EG+EGAGKTT I+ + L + D+ TREPGGTP AE R ++ Sbjct: 1 MKN-QFIVIEGLEGAGKTTAINTVVETLNQAGITDIVFTREPGGTPLAEKLRELIKQGIA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ +AE ++ AAR+ V+ VI+PAL GK ++ DR SS AYQG + Sbjct: 60 GDKVTDKAELLMLYAARVQLVDTVIQPALAAGKWVVGDRHDLSSQAYQGGGREIDRHLMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+++ + + P T+ LDLP ++GL+R ++R LD E++ + E+ R +L Sbjct: 120 SLRDLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRSRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + +D++ + + V +I + + + + Sbjct: 174 ELAAGD-ETILTIDASQNIEQVQQDIRQTLTQWLAR 208 >gi|29840268|ref|NP_829374.1| thymidylate kinase [Chlamydophila caviae GPIC] gi|34222665|sp|Q823B7|KTHY_CHLCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|29834616|gb|AAP05252.1| thymidylate kinase [Chlamydophila caviae GPIC] Length = 207 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + V TREPGG+P E R ++L Sbjct: 1 MFIVIEGCEGSGKSSLTELLKDRLIAEGKAVVATREPGGSPLGERVRDLILEPSTPSISP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F AAR +H+ I PAL G I++CDRF DS+ YQG + ++ SL Sbjct: 61 YTELFLFLAARAEHITKKIFPALESGNIVICDRFHDSTIVYQGIAEGLGKEYVTSLCHHV 120 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V E +PD T +LD+P D GL+R Q + S LD FE K + H K R+ FL +A Sbjct: 121 VGEKKFLPDLTCLLDIPADEGLRRKQQQKS------LDKFEDKPLAYHTKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+ I+D + ++ EL Sbjct: 175 AHPNSYLILDGRQPLEESLNKVMTAYTEL 203 >gi|90579079|ref|ZP_01234889.1| putative thymidylate kinase [Vibrio angustum S14] gi|90439912|gb|EAS65093.1| putative thymidylate kinase [Vibrio angustum S14] Length = 209 Score = 237 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 117/212 (55%), Gaps = 9/212 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 G FI EG+EGAGK+T I + L + +D TREPGGTP AE R ++ DE Sbjct: 3 GKFIVIEGLEGAGKSTAIKQVIATLAQHGIHDPASTREPGGTPLAEQMRALVKEGHPDEP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++ AAR+ V+NVI+PAL +G+ ++ DR SS AYQG +++L+ Sbjct: 63 LTDMAELLLLYAARIQLVDNVIKPALNQGQWVVGDRHDMSSQAYQGGGRGFDKALMENLR 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI +D+ ++GL+R + R LD E+ +V + R FL+++ Sbjct: 123 DTVLGDFRPDLTIYMDIDPELGLQRARGR------GALDRIEQMNVDFFHRARARFLELS 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 NQP+ I+D++ S V ++ + + ++ Sbjct: 177 ENQPN-VIIIDASQSLDKVTEDLQSALNAWLE 207 >gi|329297193|ref|ZP_08254529.1| thymidylate kinase [Plautia stali symbiont] Length = 211 Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 111/219 (50%), Gaps = 10/219 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M S FI EG+EGAGKTT + L + DV TREPGGTP AE R ++ Sbjct: 1 MKS-KFIVIEGLEGAGKTTAREAVVAVLHEQGIEDVVFTREPGGTPLAEQLRVLVKQGID 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEKVSDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGCGRGLDTQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + + PD T+ LD+ +IGL+R + R LD E++ + + R+ + Sbjct: 120 TLRDAVLGDFRPDLTLYLDVTPEIGLQRARAR------GELDRIEQESLNFFTRTRERYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A P +D+ + V ++ ++ + + + + Sbjct: 174 ALAAADP-TIKTIDATQPIEDVTVSLKAVLRQWLAGQAA 211 >gi|254733599|ref|ZP_05191318.1| thymidylate kinase [Bacillus anthracis str. Western North America USA6153] Length = 207 Score = 237 bits (606), Expect = 9e-61, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 109/208 (52%), Gaps = 4/208 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++ EG EG+GKTT I L + ++K V TREPGG +E R +L Sbjct: 2 KGLFVTIEGPEGSGKTTLIQSLLPYFEQKEQKVMATREPGGIAISEDIRTILHKQEYTMM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AAAR H+ + PAL E ++LCDRF+DSS AYQG + + Sbjct: 62 EARTEALLYAAARRQHLVEKVMPALNEDYLVLCDRFIDSSLAYQGYARGLGMDKVFEINR 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ MP TI LD+ ++GL R+ ++ + +D+ H++ R+ +L + Sbjct: 122 FATEDCMPSLTIYLDIEPEVGLARIAK----DAGREVNRLDMEDISFHKRVREGYLQVVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 DR +V++ + + ++ ++ + Sbjct: 178 RFSDRIVLVNADPPMEKLIEEVIQVIED 205 >gi|317486321|ref|ZP_07945152.1| thymidylate kinase [Bilophila wadsworthia 3_1_6] gi|316922432|gb|EFV43687.1| thymidylate kinase [Bilophila wadsworthia 3_1_6] Length = 208 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 74/205 (36%), Positives = 108/205 (52%), Gaps = 2/205 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEG+GKTT I L + N++V VTREPGG R +LL+ + Sbjct: 1 MFITLEGIEGSGKTTLIENLADVFRTLNHEVLVTREPGGCALGRELRQMLLNPETE-ICP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE +F A R HV VIRPAL G+++LCDR+ DS+ YQG L SL +++ Sbjct: 60 EAELFLFLADRAQHVAEVIRPALKRGEVVLCDRYADSTVVYQGYGRGLDIEKLRSLNDVA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T +LD+ LKR + R L S FE + + H + R+ F A + Sbjct: 120 IGGLWPDRTFVLDMDPADALKRARRRNAELGLSEKEGRFEAEQMPFHTRIREGFKLWAAH 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 R ++D+A S + + L + Sbjct: 180 NTKRIVVLDAADSPEGLMHQALANI 204 >gi|311106019|ref|YP_003978872.1| thymidylate kinase [Achromobacter xylosoxidans A8] gi|310760708|gb|ADP16157.1| thymidylate kinase [Achromobacter xylosoxidans A8] Length = 207 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 10/199 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG++GAGK+TH + FL+ + DV TREPGGTP E R +LL D Sbjct: 3 TRGRFITLEGVDGAGKSTHTVWIADFLRAQGLDVVSTREPGGTPLGEKLRGLLL---TDP 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + E ++ AAR +H+ VI PAL G ++CDR+ D++YAYQG + +L+ Sbjct: 60 MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGASRVAALE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T + D+P+++ R+ ++ D FER+ E+ R+ + A Sbjct: 120 DWMQAG-QPDRTWLFDVPLEVARARLA------DAREPDRFEREGAAFFERTREAYHARA 172 Query: 182 RNQPDRCHIVDSAHSFQSV 200 R IVDS S + Sbjct: 173 ATDQKRIRIVDSTQSIAQI 191 >gi|110641274|ref|YP_669004.1| thymidylate kinase [Escherichia coli 536] gi|191174621|ref|ZP_03036109.1| thymidylate kinase [Escherichia coli F11] gi|215486309|ref|YP_002328740.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69] gi|218704509|ref|YP_002412028.1| thymidylate kinase [Escherichia coli UMN026] gi|293404386|ref|ZP_06648380.1| tmk [Escherichia coli FVEC1412] gi|293409463|ref|ZP_06653039.1| thymidylate kinase [Escherichia coli B354] gi|298380163|ref|ZP_06989768.1| dTMP kinase [Escherichia coli FVEC1302] gi|300896858|ref|ZP_07115350.1| thymidylate kinase [Escherichia coli MS 198-1] gi|300982521|ref|ZP_07176171.1| thymidylate kinase [Escherichia coli MS 200-1] gi|306814053|ref|ZP_07448226.1| thymidylate kinase [Escherichia coli NC101] gi|312968825|ref|ZP_07783032.1| thymidylate kinase [Escherichia coli 2362-75] gi|331646355|ref|ZP_08347458.1| dTMP kinase [Escherichia coli M605] gi|331662506|ref|ZP_08363429.1| dTMP kinase [Escherichia coli TA143] gi|331682603|ref|ZP_08383222.1| dTMP kinase [Escherichia coli H299] gi|122958415|sp|Q0TIX6|KTHY_ECOL5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732659|sp|B7NAX6|KTHY_ECOLU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808290|sp|B7UPB4|KTHY_ECO27 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|110342866|gb|ABG69103.1| thymidylate kinase [Escherichia coli 536] gi|190905100|gb|EDV64751.1| thymidylate kinase [Escherichia coli F11] gi|215264381|emb|CAS08738.1| thymidylate kinase [Escherichia coli O127:H6 str. E2348/69] gi|218431606|emb|CAR12485.1| thymidylate kinase [Escherichia coli UMN026] gi|222032851|emb|CAP75590.1| Thymidylate kinase [Escherichia coli LF82] gi|281178207|dbj|BAI54537.1| thymidylate kinase [Escherichia coli SE15] gi|284920923|emb|CBG33986.1| Thymidylate kinase [Escherichia coli 042] gi|291428972|gb|EFF01997.1| tmk [Escherichia coli FVEC1412] gi|291469931|gb|EFF12415.1| thymidylate kinase [Escherichia coli B354] gi|298279861|gb|EFI21369.1| dTMP kinase [Escherichia coli FVEC1302] gi|300307167|gb|EFJ61687.1| thymidylate kinase [Escherichia coli MS 200-1] gi|300359303|gb|EFJ75173.1| thymidylate kinase [Escherichia coli MS 198-1] gi|305852690|gb|EFM53138.1| thymidylate kinase [Escherichia coli NC101] gi|312286227|gb|EFR14140.1| thymidylate kinase [Escherichia coli 2362-75] gi|312945660|gb|ADR26487.1| thymidylate kinase [Escherichia coli O83:H1 str. NRG 857C] gi|320197575|gb|EFW72188.1| Thymidylate kinase [Escherichia coli WV_060327] gi|323190518|gb|EFZ75791.1| thymidylate kinase [Escherichia coli RN587/1] gi|324013268|gb|EGB82487.1| thymidylate kinase [Escherichia coli MS 60-1] gi|330910913|gb|EGH39423.1| thymidylate kinase [Escherichia coli AA86] gi|331045107|gb|EGI17234.1| dTMP kinase [Escherichia coli M605] gi|331060928|gb|EGI32892.1| dTMP kinase [Escherichia coli TA143] gi|331080234|gb|EGI51413.1| dTMP kinase [Escherichia coli H299] Length = 213 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTNWVKE 210 >gi|332109434|gb|EGJ10357.1| thymidylate kinase / thymidylate synthase [Rubrivivax benzoatilyticus JA2] Length = 205 Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 105/209 (50%), Gaps = 9/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G F+SFEGI+GAGK++HI L +L+ + +V VTREPGGT AE R ++L Sbjct: 1 MTAGRFLSFEGIDGAGKSSHIEWLAGWLRERGREVLVTREPGGTELAERLRELVLHQ--- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA++ AAR DH+ I PAL G ++LCDRF D+++AYQG L +L Sbjct: 58 PMDALTEALLVFAARRDHLATRIEPALAAGAVVLCDRFTDATFAYQGAGRGFDLGVLATL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q PD T+ DLP D FE +D E+ R + Sbjct: 118 ETWVQQGRQPDLTVWFDLPT------AVAAARRAAVRAPDRFESQDEAFFERVRSGYARR 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 A P R I+D+A + +V + + Sbjct: 172 AAADPGRFVILDAAATPDAVRAQLEAALE 200 >gi|188534149|ref|YP_001907946.1| thymidylate kinase [Erwinia tasmaniensis Et1/99] gi|238689725|sp|B2VDK3|KTHY_ERWT9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|188029191|emb|CAO97063.1| Thymidylate kinase (dTMP kinase) [Erwinia tasmaniensis Et1/99] Length = 210 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 111/217 (51%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + LQR D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTAREAVVSELQRHGINDIIFTREPGGTPLAEKLRELIKQGVE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG ++ Sbjct: 60 GERVTDSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDAGLMN 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LD+ IGL+R + R LD E++ + + R+ +L Sbjct: 120 SLKQAVLGDFAPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A R VD+ + V + + + +Q++ Sbjct: 174 ALASAD-SRIKTVDATRPLEQVTAALQQTLTQWLQEQ 209 >gi|289551719|ref|YP_003472623.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01] gi|315660351|ref|ZP_07913204.1| thymidylate kinase [Staphylococcus lugdunensis M23590] gi|289181250|gb|ADC88495.1| Thymidylate kinase [Staphylococcus lugdunensis HKU09-01] gi|315494640|gb|EFU82982.1| thymidylate kinase [Staphylococcus lugdunensis M23590] Length = 205 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 110/209 (52%), Gaps = 8/209 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EG+GKTT I + L +++DV TREPGG P E R V+L Sbjct: 4 FITFEGPEGSGKTTVIQAVAEKL-AQDFDVISTREPGGVPTGEEIRKVVLDGNH--MDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + L + ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALKQHKIVLCDRYIDSSLAYQGYARGIGIEEVRKLNDFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ +IG +R+ N + +++D+ H + + I N Sbjct: 121 NGLYPDLTIYLDISAEIGRQRIMN-----NQREQNRLDKEDLKFHNLVIEGYRQIMENGD 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 R VD++ + +V I+ ++K Sbjct: 176 KRFRKVDASQNIANVIEETYQIIINFLKK 204 >gi|283833607|ref|ZP_06353348.1| dTMP kinase [Citrobacter youngae ATCC 29220] gi|291071290|gb|EFE09399.1| dTMP kinase [Citrobacter youngae ATCC 29220] Length = 213 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKSVGDEI 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALARGAWVIGDRHDLSTQAYQGGGRGIDQNMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGDFRPDLTIYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +D+ ++V +I N + V+++ + Sbjct: 179 AKDAS-IRTIDATQPLEAVMADIRNTITRWVKEQGA 213 >gi|170679734|ref|YP_001744081.1| thymidylate kinase [Escherichia coli SMS-3-5] gi|218700399|ref|YP_002408028.1| thymidylate kinase [Escherichia coli IAI39] gi|300938665|ref|ZP_07153392.1| thymidylate kinase [Escherichia coli MS 21-1] gi|301023303|ref|ZP_07187098.1| thymidylate kinase [Escherichia coli MS 69-1] gi|226732657|sp|B7NKI2|KTHY_ECO7I RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732660|sp|B1LI47|KTHY_ECOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|170517452|gb|ACB15630.1| thymidylate kinase [Escherichia coli SMS-3-5] gi|218370385|emb|CAR18190.1| thymidylate kinase [Escherichia coli IAI39] gi|300397072|gb|EFJ80610.1| thymidylate kinase [Escherichia coli MS 69-1] gi|300456381|gb|EFK19874.1| thymidylate kinase [Escherichia coli MS 21-1] Length = 213 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ +SV I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLESVMDAIRTTVTNWVKE 210 >gi|314932704|ref|ZP_07840074.1| dTMP kinase [Staphylococcus caprae C87] gi|313654534|gb|EFS18286.1| dTMP kinase [Staphylococcus caprae C87] Length = 205 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 115/208 (55%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ IS + + L + DV TREPGG P E R V+L ++ Sbjct: 4 FITFEGPEGAGKTSVISKVSQKL-ATDMDVITTREPGGVPTGEEIRRVVLEG--NKMDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++D HEK + + I + P Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRIIDSDP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R V++ ++V + + ++ Sbjct: 176 ERFVKVNADQDLENVVEEAYQSIIKYLK 203 >gi|170780642|ref|YP_001708974.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus] gi|189028830|sp|B0RAE3|KTHY_CLAMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|169155210|emb|CAQ00311.1| thymidylate kinase [Clavibacter michiganensis subsp. sepedonicus] Length = 211 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+FI+ EG +G GK+T +LL+ +L+ + ++V VTREPGG+ + R ++L Sbjct: 2 TGVFITLEGGDGVGKSTQSALLREWLEEQGHEVVVTREPGGSDLGQEIREIVLHRRG-HI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R HVE V+RPAL G ++L DR+LDSS AYQG + L Sbjct: 61 APRAEALLYAADRAHHVETVVRPALERGAVVLQDRYLDSSVAYQGAGRVLDAAEIRDLSL 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + Q ++PD T++LDL R++ D E + HE+ RQ FL +A Sbjct: 121 WAAQGLLPDLTVLLDLD--QAAARIR---LDAARTRFDRLEAERADFHERVRQAFLGLAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +VD+ + +A I L+ Sbjct: 176 AEPERFLVVDAGWPREVIAAEIRARAHVLI 205 >gi|225024056|ref|ZP_03713248.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC 23834] gi|224943081|gb|EEG24290.1| hypothetical protein EIKCOROL_00923 [Eikenella corrodens ATCC 23834] Length = 205 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 114/206 (55%), Gaps = 7/206 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ +GI+GAGKTT +++++ + + V TREPGGTP EA R +LL+ G Sbjct: 5 FITLDGIDGAGKTTQLAVIREWFAAQERPVLFTREPGGTPLGEALRRLLLNPKTQA-GLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE ++ AAR H+E+VI PAL + ++ DRF D+++AYQG + L++ Sbjct: 64 AETLLMFAARAQHIESVILPALEDDVSVVSDRFTDATFAYQGGGRGLPEADIAQLEQWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P TI+LD+P+++ L R++ S D FE+++ + RQ +L+ A P Sbjct: 124 GNLRPSLTILLDVPLEVSLARIE------RSRNKDRFEQEEADFFTRVRQSYLERAAAAP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211 +R +++S V +I + +L Sbjct: 178 ERYTVINSNRGKTVVRRDIEAALEKL 203 >gi|50120735|ref|YP_049902.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043] gi|59798244|sp|Q6D683|KTHY_ERWCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|49611261|emb|CAG74707.1| thymidylate kinase [Pectobacterium atrosepticum SCRI1043] Length = 219 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 10/206 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT +++ L+ +V TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARNIVVETLRSHGVKEVLFTREPGGTPLAEKLRELIKQGMA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ V+NVI+PAL +GK ++ DR SS AYQG L Sbjct: 60 DEKVTDKAEVLMLYAARVQLVDNVIKPALADGKWVIGDRHDLSSQAYQGGGRGIDQQLLR 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + PD T+ LDLP IGL+R + R LD E++ + ++ R + Sbjct: 120 SLRDTVLGNFRPDLTLYLDLPPAIGLQRARQR------GELDRIEQESLAFFDRTRTRYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNI 204 +A D +D++ S +V+ +I Sbjct: 174 ALAAED-DSILTIDASQSIDAVSADI 198 >gi|223044432|ref|ZP_03614465.1| thymidylate kinase [Staphylococcus capitis SK14] gi|222442221|gb|EEE48333.1| thymidylate kinase [Staphylococcus capitis SK14] Length = 205 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ IS + + L + DV TREPGG P E R V+L Sbjct: 4 FITFEGPEGAGKTSVISKVSQKL-ATDMDVITTREPGGVPTGEEIRRVVLEGNN--MDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ + PAL + KI+LCDR++DSS AYQG + +L E ++ Sbjct: 61 TEAMLFAASRREHLVEKVIPALKKDKIVLCDRYIDSSLAYQGYARGIGIEEVKTLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ ++G +R+ L+ + +++D HEK + + + + P Sbjct: 121 NGLYPDLTIYLDVSAEVGHQRI-----LKNQRNQNRLDQEDKAFHEKVIEGYQRVIDSDP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 +R V++ ++V + + ++ Sbjct: 176 ERFVKVNADQDLENVVEEAYQSIIKYLK 203 >gi|94987202|ref|YP_595135.1| thymidylate kinase [Lawsonia intracellularis PHE/MN1-00] gi|166221750|sp|Q1MQB3|KTHY_LAWIP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|94731451|emb|CAJ54814.1| Thymidylate kinase [Lawsonia intracellularis PHE/MN1-00] Length = 208 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 2/209 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGIEG+GKTT I+ L + + DV VTREPGG R ++LS + A Sbjct: 1 MFITIEGIEGSGKTTLINRLSEYFSSRGEDVIVTREPGGCELGGLLRSLVLSSELG-LTA 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E+E +F A R HV I+PA+M GK + CDR+ DS+ YQG L E++ Sbjct: 60 ESELFLFLADRAQHVSECIQPAIMNGKTVFCDRYADSTIVYQGYGRGMNIGKLWEFNEVA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 ++ + P T++LD+ V+ L+R R ++ FE + + H + R FL A Sbjct: 120 IKGIWPQKTLLLDIDVEKALERACIRNEALGLNIVEGRFESEPMDFHNRIRDGFLHWAGR 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR I+++ + + + ++++ E+V Sbjct: 180 NPDRITILNADTTPEDLFQQSVSVLREIV 208 >gi|16760076|ref|NP_455693.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764555|ref|NP_460170.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29142153|ref|NP_805495.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|167553642|ref|ZP_02347390.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992017|ref|ZP_02573116.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168239102|ref|ZP_02664160.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194733912|ref|YP_002114205.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197261673|ref|ZP_03161747.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245346|ref|YP_002215938.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204930858|ref|ZP_03221731.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213053423|ref|ZP_03346301.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425024|ref|ZP_03357774.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213579917|ref|ZP_03361743.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612964|ref|ZP_03370790.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646378|ref|ZP_03376431.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|54037702|sp|P65247|KTHY_SALTI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|54041416|sp|P65246|KTHY_SALTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690322|sp|B5FKA7|KTHY_SALDC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238693684|sp|B4TTH0|KTHY_SALSV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|25288292|pir||AI0642 dTMP kinase (EC 2.7.4.9) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16419717|gb|AAL20129.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502370|emb|CAD08324.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137782|gb|AAO69344.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|194709414|gb|ACF88635.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197239928|gb|EDY22548.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288135|gb|EDY27522.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939862|gb|ACH77195.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|204320317|gb|EDZ05521.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205321974|gb|EDZ09813.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329725|gb|EDZ16489.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246412|emb|CBG24221.1| dTMP kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992975|gb|ACY87860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157741|emb|CBW17233.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912188|dbj|BAJ36162.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223815|gb|EFX48878.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129469|gb|ADX16899.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326623686|gb|EGE30031.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 213 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +D+ +V +I V + VQ++ + Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|54297309|ref|YP_123678.1| thymidylate kinase [Legionella pneumophila str. Paris] gi|59798140|sp|Q5X5G6|KTHY_LEGPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53751094|emb|CAH12505.1| hypothetical protein lpp1354 [Legionella pneumophila str. Paris] Length = 212 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 109/215 (50%), Gaps = 8/215 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T ++L+ L +K TREPGGT E R ++ + + Sbjct: 5 TGKLIVIEGLEGAGKSTAVNLVVELLSQKKISTITTREPGGTRIGEILRSIIKNPEYNNV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E ++ AAR+ +E VI+PAL G+ ++ DRF S+ AYQG ++ L Sbjct: 65 LDDRSELLLLYAARIQLIEQVIKPALNVGQWVIADRFELSTLAYQGGGRKMNMRVINELS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+ LD+ ++G+ R ++R D E++ + + + + Sbjct: 125 NFCLKGFKPDLTLYLDINPELGMIRAKSR------GKFDRIEQESIEFFHRIHDTYHVLV 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + P+ ++D+ S V ++I +++ E ++ + Sbjct: 179 KQNPE-IMMIDANRSLDEVQSSIQSVIEEFIEHNL 212 >gi|303233183|ref|ZP_07319856.1| dTMP kinase [Atopobium vaginae PB189-T1-4] gi|302480768|gb|EFL43855.1| dTMP kinase [Atopobium vaginae PB189-T1-4] Length = 207 Score = 237 bits (605), Expect = 1e-60, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 7/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G GKTT + L +R V REPGGT +EA R ++L+ + Sbjct: 1 MFITFEGIDGCGKTTQVKRLVSAFRRAGNKVVSLREPGGTTISEAIRSMVLNPAMSSMCN 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E +++ AAR V VI PAL +++CDR+ DS++AYQ + E+ Sbjct: 61 ETELLLYEAARAQLVREVIEPALARDVVVVCDRYADSTFAYQYAARGLDKELVCRANELG 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V+PD TI+LD+ VD +R + D E++ + R ++++AR Sbjct: 121 SCGVVPDITIVLDMDVDTAYRRATAQSC-------DRLEQEGREFQTRVRNGYIELARLY 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P+R H++ + Q+V I ++ E Sbjct: 174 PERVHLIGGDDTPQAVFNRICVVLGE 199 >gi|193216174|ref|YP_001997373.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110] gi|193089651|gb|ACF14926.1| dTMP kinase [Chloroherpeton thalassium ATCC 35110] Length = 226 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 111/211 (52%), Gaps = 6/211 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+FEGI+G+GK+T I LLK FLQ + ++V REPGG P AE R +LL + Sbjct: 7 GFLITFEGIDGSGKSTQIKLLKDFLQSRGFEVLSLREPGGVPVAEQIRAILLENKNE-IN 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++F+A+R V+ VI PAL + ++++ DRF DS+ AYQG + + EI Sbjct: 66 PIAELLLFSASRAALVQAVIIPALEQRQVVVLDRFYDSTVAYQGYGRGISLERIHQINEI 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKRRQIFL 178 + ++P+ T DL + L R + SL LD ER + ++ R + Sbjct: 126 ASFGLLPNLTFYFDLQPEDALLRKFSEKSLPLSFKDNEIPLDRMERAGLEFFQRVRTGYK 185 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 ++ + P+R + +D+ S + ++ + Sbjct: 186 ELVQTAPERFYEIDALCSISEIHQKVVERIK 216 >gi|332173841|gb|AEE23095.1| thymidylate kinase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 209 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 8/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59 ++ G FI EG+EGAGK+T +S++K +++ + + TREPGGT AEA R + Sbjct: 2 IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHRLICTREPGGTAMAEAIRECVKKDWQN 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EAE ++ AAR + NVI PAL GK +L DR SS AYQG + Sbjct: 62 ETVTTEAELLLMYAARAQLLHNVIHPALSSGKWVLGDRHDMSSQAYQGGGREIPQTLIQP 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L++I+++ +PD T+ LD+ +GL+R + R LD E+ D+ E+ R +L Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSVGLQRARGR------GELDRIEQLDISFFERTRARYLS 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A D C ++++ +SV +I + + + Sbjct: 176 LAEQD-DNCVVINTMQPIESVHHDIKLAIQQFL 207 >gi|285017427|ref|YP_003375138.1| thymidylate kinase (dtmp kinase) protein [Xanthomonas albilineans GPE PC73] gi|283472645|emb|CBA15150.1| probable thymidylate kinase (dtmp kinase) protein [Xanthomonas albilineans] Length = 223 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 75/197 (38%), Positives = 104/197 (52%), Gaps = 10/197 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVD 60 F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE R +LL + Sbjct: 10 RFVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDTAPSSSAE 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE E ++ AAR HV VIRPAL G ++ DRF DSSYAYQGE ++ L Sbjct: 70 PLSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWIADL 129 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +V + P T++LDL V IG R R D E + ++ R F Sbjct: 130 ERRAV-GLQPGLTLLLDLDVQIGRARTSGRDL-----WPDRIESEQDDFFQRVRAGFRQR 183 Query: 181 ARNQPDRCHIVDSAHSF 197 A P R ++D++ Sbjct: 184 ATQDPQRFRVIDASQPP 200 >gi|85374070|ref|YP_458132.1| thymidylate kinase [Erythrobacter litoralis HTCC2594] gi|84787153|gb|ABC63335.1| thymidylate kinase [Erythrobacter litoralis HTCC2594] Length = 212 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 106/212 (50%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T LL L + + VTREPGGT AEA R +LL D Sbjct: 1 MTRGRFIALEGGEGTGKSTQARLLAEALSTRGIECVVTREPGGTEGAEAIRRLLLDPPGD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +G AEA++FAAAR DHVE +I PAL G ++ DRFLDSS AYQG + +L Sbjct: 61 GWGPRAEALLFAAARSDHVEKLILPALERGAWVVSDRFLDSSRAYQGGAGGIGDQAVRTL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I + PD T+++++ +R+ +R R D + H F Sbjct: 121 HDIGSGGLRPDLTVLIEVEPATIAERLADRDGNRS----DAIGGRSAQYHADVAASFKRF 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P +VD + V + IL + L+ Sbjct: 177 AAEDPGGFAVVDGEGTPDEVHSRILEAIEPLI 208 >gi|16129061|ref|NP_415616.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655] gi|24112504|ref|NP_707014.1| thymidylate kinase [Shigella flexneri 2a str. 301] gi|30062632|ref|NP_836803.1| thymidylate kinase [Shigella flexneri 2a str. 2457T] gi|74311659|ref|YP_310078.1| thymidylate kinase [Shigella sonnei Ss046] gi|82544436|ref|YP_408383.1| thymidylate kinase [Shigella boydii Sb227] gi|82777289|ref|YP_403638.1| thymidylate kinase [Shigella dysenteriae Sd197] gi|89107944|ref|AP_001724.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110] gi|110805112|ref|YP_688632.1| thymidylate kinase [Shigella flexneri 5 str. 8401] gi|157157223|ref|YP_001462330.1| thymidylate kinase [Escherichia coli E24377A] gi|157160624|ref|YP_001457942.1| thymidylate kinase [Escherichia coli HS] gi|170020507|ref|YP_001725461.1| thymidylate kinase [Escherichia coli ATCC 8739] gi|170080749|ref|YP_001730069.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B] gi|187732338|ref|YP_001880732.1| thymidylate kinase [Shigella boydii CDC 3083-94] gi|188495742|ref|ZP_03003012.1| thymidylate kinase [Escherichia coli 53638] gi|194429813|ref|ZP_03062327.1| thymidylate kinase [Escherichia coli B171] gi|194433682|ref|ZP_03065958.1| thymidylate kinase [Shigella dysenteriae 1012] gi|209918353|ref|YP_002292437.1| thymidylate kinase [Escherichia coli SE11] gi|218553675|ref|YP_002386588.1| thymidylate kinase [Escherichia coli IAI1] gi|218694631|ref|YP_002402298.1| thymidylate kinase [Escherichia coli 55989] gi|238900352|ref|YP_002926148.1| thymidylate kinase [Escherichia coli BW2952] gi|253773879|ref|YP_003036710.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161204|ref|YP_003044312.1| thymidylate kinase [Escherichia coli B str. REL606] gi|256018646|ref|ZP_05432511.1| thymidylate kinase [Shigella sp. D9] gi|256023205|ref|ZP_05437070.1| thymidylate kinase [Escherichia sp. 4_1_40B] gi|260843338|ref|YP_003221116.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009] gi|260854581|ref|YP_003228472.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368] gi|260867461|ref|YP_003233863.1| thymidylate kinase [Escherichia coli O111:H- str. 11128] gi|293414391|ref|ZP_06657040.1| thymidylate kinase [Escherichia coli B185] gi|293433387|ref|ZP_06661815.1| thymidylate kinase [Escherichia coli B088] gi|297516810|ref|ZP_06935196.1| thymidylate kinase [Escherichia coli OP50] gi|300816798|ref|ZP_07097018.1| thymidylate kinase [Escherichia coli MS 107-1] gi|300821123|ref|ZP_07101272.1| thymidylate kinase [Escherichia coli MS 119-7] gi|300902489|ref|ZP_07120470.1| thymidylate kinase [Escherichia coli MS 84-1] gi|300918704|ref|ZP_07135282.1| thymidylate kinase [Escherichia coli MS 115-1] gi|300922624|ref|ZP_07138722.1| thymidylate kinase [Escherichia coli MS 182-1] gi|300928351|ref|ZP_07143885.1| thymidylate kinase [Escherichia coli MS 187-1] gi|300948684|ref|ZP_07162764.1| thymidylate kinase [Escherichia coli MS 116-1] gi|300956239|ref|ZP_07168549.1| thymidylate kinase [Escherichia coli MS 175-1] gi|301029599|ref|ZP_07192674.1| thymidylate kinase [Escherichia coli MS 196-1] gi|301328531|ref|ZP_07221595.1| thymidylate kinase [Escherichia coli MS 78-1] gi|301644512|ref|ZP_07244506.1| thymidylate kinase [Escherichia coli MS 146-1] gi|307137733|ref|ZP_07497089.1| thymidylate kinase [Escherichia coli H736] gi|307310125|ref|ZP_07589775.1| thymidylate kinase [Escherichia coli W] gi|309788170|ref|ZP_07682776.1| thymidylate kinase [Shigella dysenteriae 1617] gi|309796559|ref|ZP_07690966.1| thymidylate kinase [Escherichia coli MS 145-7] gi|331641641|ref|ZP_08342776.1| dTMP kinase [Escherichia coli H736] gi|331652150|ref|ZP_08353169.1| dTMP kinase [Escherichia coli M718] gi|331667498|ref|ZP_08368362.1| dTMP kinase [Escherichia coli TA271] gi|331676888|ref|ZP_08377584.1| dTMP kinase [Escherichia coli H591] gi|61227288|sp|P0A720|KTHY_ECOLI RecName: Full=Thymidylate kinase; AltName: Full=Thymidine monophosphate kinase; AltName: Full=dTMP kinase; Short=TMPK gi|61227291|sp|P0A721|KTHY_SHIFL RecName: Full=Thymidylate kinase; AltName: Full=Thymidine monophosphate kinase; AltName: Full=dTMP kinase; Short=TMPK gi|123342975|sp|Q0T5T8|KTHY_SHIF8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123559364|sp|Q31ZF3|KTHY_SHIBS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123562339|sp|Q32EV8|KTHY_SHIDS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123617461|sp|Q3Z319|KTHY_SHISS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166987701|sp|A7ZKK1|KTHY_ECO24 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166987702|sp|A7ZZ55|KTHY_ECOHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189028833|sp|B1IUG7|KTHY_ECOLC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|226732658|sp|B7LX32|KTHY_ECO8A RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621735|sp|B1XA08|KTHY_ECODH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238057698|sp|B6I9H5|KTHY_ECOSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238689520|sp|B2U523|KTHY_SHIB3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808291|sp|B7LG31|KTHY_ECO55 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|259494268|sp|C4ZS38|KTHY_ECOBW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1244710|gb|AAB06878.1| thymidylate kinase [Escherichia coli str. K-12 substr. W3110] gi|1787340|gb|AAC74182.1| thymidylate kinase [Escherichia coli str. K-12 substr. MG1655] gi|4062665|dbj|BAA35905.1| thymidylate kinase [Escherichia coli str. K12 substr. W3110] gi|24051393|gb|AAN42721.1| thymidylate kinase [Shigella flexneri 2a str. 301] gi|30040878|gb|AAP16609.1| thymidylate kinase [Shigella flexneri 2a str. 2457T] gi|73855136|gb|AAZ87843.1| thymidylate kinase [Shigella sonnei Ss046] gi|81241437|gb|ABB62147.1| thymidylate kinase [Shigella dysenteriae Sd197] gi|81245847|gb|ABB66555.1| thymidylate kinase [Shigella boydii Sb227] gi|110614660|gb|ABF03327.1| thymidylate kinase [Shigella flexneri 5 str. 8401] gi|157066304|gb|ABV05559.1| thymidylate kinase [Escherichia coli HS] gi|157079253|gb|ABV18961.1| thymidylate kinase [Escherichia coli E24377A] gi|169755435|gb|ACA78134.1| dTMP kinase [Escherichia coli ATCC 8739] gi|169888584|gb|ACB02291.1| thymidylate kinase [Escherichia coli str. K-12 substr. DH10B] gi|187429330|gb|ACD08604.1| thymidylate kinase [Shigella boydii CDC 3083-94] gi|188490941|gb|EDU66044.1| thymidylate kinase [Escherichia coli 53638] gi|194412160|gb|EDX28468.1| thymidylate kinase [Escherichia coli B171] gi|194418111|gb|EDX34204.1| thymidylate kinase [Shigella dysenteriae 1012] gi|209911612|dbj|BAG76686.1| thymidylate kinase [Escherichia coli SE11] gi|218351363|emb|CAU97069.1| thymidylate kinase [Escherichia coli 55989] gi|218360443|emb|CAQ97997.1| thymidylate kinase [Escherichia coli IAI1] gi|238863660|gb|ACR65658.1| thymidylate kinase [Escherichia coli BW2952] gi|242376901|emb|CAQ31619.1| dTMP kinase [Escherichia coli BL21(DE3)] gi|253324923|gb|ACT29525.1| thymidylate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973105|gb|ACT38776.1| thymidylate kinase [Escherichia coli B str. REL606] gi|253977319|gb|ACT42989.1| thymidylate kinase [Escherichia coli BL21(DE3)] gi|257753230|dbj|BAI24732.1| thymidylate kinase [Escherichia coli O26:H11 str. 11368] gi|257758485|dbj|BAI29982.1| thymidylate kinase [Escherichia coli O103:H2 str. 12009] gi|257763817|dbj|BAI35312.1| thymidylate kinase [Escherichia coli O111:H- str. 11128] gi|260449763|gb|ACX40185.1| dTMP kinase [Escherichia coli DH1] gi|281600514|gb|ADA73498.1| Thymidylate kinase [Shigella flexneri 2002017] gi|291324206|gb|EFE63628.1| thymidylate kinase [Escherichia coli B088] gi|291434449|gb|EFF07422.1| thymidylate kinase [Escherichia coli B185] gi|299877521|gb|EFI85732.1| thymidylate kinase [Escherichia coli MS 196-1] gi|300316932|gb|EFJ66716.1| thymidylate kinase [Escherichia coli MS 175-1] gi|300405425|gb|EFJ88963.1| thymidylate kinase [Escherichia coli MS 84-1] gi|300414139|gb|EFJ97449.1| thymidylate kinase [Escherichia coli MS 115-1] gi|300421032|gb|EFK04343.1| thymidylate kinase [Escherichia coli MS 182-1] gi|300451823|gb|EFK15443.1| thymidylate kinase [Escherichia coli MS 116-1] gi|300463609|gb|EFK27102.1| thymidylate kinase [Escherichia coli MS 187-1] gi|300526422|gb|EFK47491.1| thymidylate kinase [Escherichia coli MS 119-7] gi|300530572|gb|EFK51634.1| thymidylate kinase [Escherichia coli MS 107-1] gi|300845077|gb|EFK72837.1| thymidylate kinase [Escherichia coli MS 78-1] gi|301077144|gb|EFK91950.1| thymidylate kinase [Escherichia coli MS 146-1] gi|306909843|gb|EFN40337.1| thymidylate kinase [Escherichia coli W] gi|308119871|gb|EFO57133.1| thymidylate kinase [Escherichia coli MS 145-7] gi|308924022|gb|EFP69523.1| thymidylate kinase [Shigella dysenteriae 1617] gi|309701370|emb|CBJ00671.1| Thymidylate kinase [Escherichia coli ETEC H10407] gi|313650449|gb|EFS14856.1| thymidylate kinase [Shigella flexneri 2a str. 2457T] gi|315060375|gb|ADT74702.1| thymidylate kinase [Escherichia coli W] gi|315135730|dbj|BAJ42889.1| thymidylate kinase [Escherichia coli DH1] gi|315253898|gb|EFU33866.1| thymidylate kinase [Escherichia coli MS 85-1] gi|315618269|gb|EFU98859.1| thymidylate kinase [Escherichia coli 3431] gi|320174249|gb|EFW49410.1| Thymidylate kinase [Shigella dysenteriae CDC 74-1112] gi|320179203|gb|EFW54161.1| Thymidylate kinase [Shigella boydii ATCC 9905] gi|320186954|gb|EFW61667.1| Thymidylate kinase [Shigella flexneri CDC 796-83] gi|320200993|gb|EFW75577.1| Thymidylate kinase [Escherichia coli EC4100B] gi|323163640|gb|EFZ49462.1| thymidylate kinase [Escherichia coli E128010] gi|323165606|gb|EFZ51393.1| thymidylate kinase [Shigella sonnei 53G] gi|323175671|gb|EFZ61265.1| thymidylate kinase [Escherichia coli 1180] gi|323185779|gb|EFZ71140.1| thymidylate kinase [Escherichia coli 1357] gi|323379065|gb|ADX51333.1| thymidylate kinase [Escherichia coli KO11] gi|323937838|gb|EGB34102.1| thymidylate kinase [Escherichia coli E1520] gi|323942567|gb|EGB38734.1| thymidylate kinase [Escherichia coli E482] gi|323947599|gb|EGB43603.1| thymidylate kinase [Escherichia coli H120] gi|323962697|gb|EGB58275.1| thymidylate kinase [Escherichia coli H489] gi|323973313|gb|EGB68502.1| thymidylate kinase [Escherichia coli TA007] gi|324017491|gb|EGB86710.1| thymidylate kinase [Escherichia coli MS 117-3] gi|324117331|gb|EGC11238.1| thymidylate kinase [Escherichia coli E1167] gi|331038439|gb|EGI10659.1| dTMP kinase [Escherichia coli H736] gi|331050428|gb|EGI22486.1| dTMP kinase [Escherichia coli M718] gi|331065083|gb|EGI36978.1| dTMP kinase [Escherichia coli TA271] gi|331075577|gb|EGI46875.1| dTMP kinase [Escherichia coli H591] gi|332089300|gb|EGI94406.1| thymidylate kinase [Shigella boydii 5216-82] gi|332092925|gb|EGI97993.1| thymidylate kinase [Shigella dysenteriae 155-74] gi|332094408|gb|EGI99457.1| thymidylate kinase [Shigella boydii 3594-74] gi|332102067|gb|EGJ05413.1| thymidylate kinase [Shigella sp. D9] Length = 213 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|119486991|ref|ZP_01620863.1| Thymidylate kinase [Lyngbya sp. PCC 8106] gi|119455920|gb|EAW37054.1| Thymidylate kinase [Lyngbya sp. PCC 8106] Length = 219 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 12/226 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDV---HVTREPGGTPAAEAARHVLLS 56 MN G I FEG EG GKTT I ++L+ + V T+EPGGT + R++LL Sbjct: 1 MN-GKLIVFEGSEGGGKTTQIQQTDQWLRDQLGSSVPAIITTKEPGGTALGRSLRNILLD 59 Query: 57 CG-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + AE ++FA+ R HVE ++P L +G I+LCDRF DS+ AYQG Sbjct: 60 SRLEEPIAPTAELLLFASDRAQHVETFLKPHLKQGAIILCDRFTDSTIAYQGFGRGLDKN 119 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + L +I+ + D T+ D+ ++ GL R Q R +D E+ D+ H++ Q Sbjct: 120 LIKQLNQIATVGLESDLTLWFDIEIEKGLARTQTR------GEMDRMEKADLAFHQRVNQ 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 F ++A DR +D+ S Q V+T I I+ + + K L S Sbjct: 174 GFCELADQAGDRMIRIDANLSLQQVSTQIQTILTQYLLKWGFTLQS 219 >gi|56460444|ref|YP_155725.1| thymidylate kinase [Idiomarina loihiensis L2TR] gi|73920821|sp|Q5QZ32|KTHY_IDILO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56179454|gb|AAV82176.1| Thymidylate kinase [Idiomarina loihiensis L2TR] Length = 205 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 113/210 (53%), Gaps = 7/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI EG+EGAGK++ I+ + LQ K V REPGGTP AE+ R ++ ++ Sbjct: 2 SGKFIVIEGLEGAGKSSAIASVVTHLQAKGIQVETVREPGGTPLAESLRDLVKKKWEEKV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ A+R+ V+N+I+PAL + + ++ DR SS AYQG L +++ Sbjct: 62 SPTTELLLMYASRVQLVDNIIKPALSKNRWVIGDRHDLSSRAYQGGGRELGDELLQKIRK 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ PD T++LD+ GL+R + R LD E +D+ ++ RQ +L+IA Sbjct: 122 ITLGNFTPDLTLLLDVEEKKGLERARER------GELDRIEEEDLAFFQRTRQRYLNIAA 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P ++D+ S V +IL + E + Sbjct: 176 KDPS-IIVIDANQSMLDVHQSILRAIEEYL 204 >gi|297627199|ref|YP_003688962.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922964|emb|CBL57546.1| Thymidylate kinase (dTMP kinase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 212 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 9/208 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F+ FEG +G GK+T + LL L VTREPGGTP + R +LL + Sbjct: 8 GWFVVFEGGDGVGKSTQVELLADALADAGVSHLVTREPGGTPLGDNIRELLLDPASGDVA 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+++AA + H+ V+ PAL GK+++CDR+LDS AYQG + + + + Sbjct: 68 PRAEALLYAADKAQHLHEVVVPALAAGKVVVCDRYLDSMLAYQGAGRVLELREVADIADW 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + PD T++LDL D + D E+ V H + RQ FLD+A Sbjct: 128 ATRGLRPDLTVLLDLDPDEA---------VGMKEHKDRLEQAGVEFHRRVRQGFLDLANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R ++ + A + + L Sbjct: 179 DPERYLVLPGRQGREWAAGRVRERLRGL 206 >gi|218689050|ref|YP_002397262.1| thymidylate kinase [Escherichia coli ED1a] gi|254808292|sp|B7MTM8|KTHY_ECO81 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218426614|emb|CAR07442.1| thymidylate kinase [Escherichia coli ED1a] Length = 213 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMGAIRTTVTNWVKE 210 >gi|109898434|ref|YP_661689.1| thymidylate kinase [Pseudoalteromonas atlantica T6c] gi|109700715|gb|ABG40635.1| thymidylate kinase [Pseudoalteromonas atlantica T6c] Length = 209 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 114/213 (53%), Gaps = 8/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-SCGV 59 ++ G FI EG+EGAGK+T +S++K +++ + + TREPGGT AEA R + Sbjct: 2 IHPGKFIVIEGLEGAGKSTAVSIVKSCIEQAGHSLTCTREPGGTAMAEAIRECVKKDWPN 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EAE ++ AAR + NVI PAL G +L DR SS AYQG + Sbjct: 62 ETVTTEAELLLMYAARAQLLHNVIHPALTSGSWVLGDRHDMSSQAYQGGGREIPQTLIQP 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L++I+++ +PD T+ LD+ IGL R + R LD E+ D+ E+ R +L Sbjct: 122 LRDITLKGFVPDFTLYLDVEPSIGLARARGR------GELDRIEQLDISFFERTRARYLS 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A + C ++D+ S + V +I + + + + Sbjct: 176 LAEQD-ENCVVIDTMQSIEQVHHDIQHAMQQFL 207 >gi|291282118|ref|YP_003498936.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615] gi|209773158|gb|ACI84891.1| thymidylate kinase [Escherichia coli] gi|209773164|gb|ACI84894.1| thymidylate kinase [Escherichia coli] gi|290761991|gb|ADD55952.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615] gi|320637549|gb|EFX07349.1| thymidylate kinase [Escherichia coli O157:H7 str. G5101] gi|320643110|gb|EFX12311.1| thymidylate kinase [Escherichia coli O157:H- str. 493-89] gi|320648568|gb|EFX17223.1| thymidylate kinase [Escherichia coli O157:H- str. H 2687] gi|320653882|gb|EFX21956.1| thymidylate kinase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320659362|gb|EFX26931.1| thymidylate kinase [Escherichia coli O55:H7 str. USDA 5905] gi|320664497|gb|EFX31648.1| thymidylate kinase [Escherichia coli O157:H7 str. LSU-61] Length = 213 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTRWVKE 210 >gi|188026129|ref|ZP_02960979.2| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827] gi|188021733|gb|EDU59773.1| hypothetical protein PROSTU_02965 [Providencia stuartii ATCC 25827] Length = 212 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M + +I EG+EGAGKTT I + L + D+ TREPGGTP AE R ++ Sbjct: 5 MKN-AYIVIEGLEGAGKTTAIKTVVETLNQAGIQDIAFTREPGGTPLAEKLRELIKQGIS 63 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VENVI+PAL GK ++ DR SS AYQG + Sbjct: 64 GEKVTDKAELLMLYAARVQLVENVIKPALAAGKWVVGDRHDLSSQAYQGGGRGIDRQLMQ 123 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+++ + E P T+ LDLP +GL+R + R LD E++ + E+ R + Sbjct: 124 SLRDLVLGEFKPALTLYLDLPPALGLQRARAR------GELDRIEQESLAFFERTRARYR 177 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + + +D++ + + V +I + + + K Sbjct: 178 ELAASD-ETILTIDASQNIEQVQHDIRQALQQWLAK 212 >gi|261339399|ref|ZP_05967257.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316] gi|288318200|gb|EFC57138.1| dTMP kinase [Enterobacter cancerogenus ATCC 35316] Length = 213 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 111/219 (50%), Gaps = 12/219 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVDTLNTLGVADIVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL +GK ++ DR S+ AYQG Sbjct: 60 VGDEVINDKAEVLMFYAARVQLVETVIKPALADGKWVIGDRHDLSTQAYQGGGRGIDQTM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +L++A +D+ S V I V +Q++ Sbjct: 174 YLELAGQDK-TIRTIDATQSLDDVTRAIQQTVTTWLQEQ 211 >gi|56413814|ref|YP_150889.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179720|ref|YP_216137.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614574|ref|YP_001588539.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168233077|ref|ZP_02658135.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168244269|ref|ZP_02669201.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168264293|ref|ZP_02686266.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168467156|ref|ZP_02700998.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168822302|ref|ZP_02834302.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443726|ref|YP_002040454.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450656|ref|YP_002045199.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194472980|ref|ZP_03078964.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197251767|ref|YP_002146843.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197362737|ref|YP_002142374.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|200390972|ref|ZP_03217583.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205353065|ref|YP_002226866.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857293|ref|YP_002243944.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224584293|ref|YP_002638091.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238910980|ref|ZP_04654817.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|73920828|sp|Q5PGT4|KTHY_SALPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|75483993|sp|Q57QF5|KTHY_SALCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030841|sp|A9N5K6|KTHY_SALPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238689910|sp|B5BAH5|KTHY_SALPK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690068|sp|B5F907|KTHY_SALA4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690412|sp|B5QXD6|KTHY_SALEP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690500|sp|B5RBA2|KTHY_SALG2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238690636|sp|B4TFH5|KTHY_SALHS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238693599|sp|B4T332|KTHY_SALNS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808304|sp|C0Q792|KTHY_SALPC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56128071|gb|AAV77577.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127353|gb|AAX65056.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161363938|gb|ABX67706.1| hypothetical protein SPAB_02323 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402389|gb|ACF62611.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408960|gb|ACF69179.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194459344|gb|EDX48183.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|195630427|gb|EDX49053.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094214|emb|CAR59719.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215470|gb|ACH52867.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|199603417|gb|EDZ01963.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205272846|emb|CAR37773.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205332642|gb|EDZ19406.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336753|gb|EDZ23517.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341244|gb|EDZ28008.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347282|gb|EDZ33913.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709096|emb|CAR33429.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468820|gb|ACN46650.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|320086360|emb|CBY96133.1| Thymidylate kinase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322714190|gb|EFZ05761.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|326628144|gb|EGE34487.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 213 Score = 236 bits (604), Expect = 1e-60, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGIWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +D+ +V +I V + VQ++ + Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|322616575|gb|EFY13484.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619910|gb|EFY16784.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622478|gb|EFY19323.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322629405|gb|EFY26182.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633924|gb|EFY30662.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636854|gb|EFY33557.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641346|gb|EFY37985.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645110|gb|EFY41639.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322652275|gb|EFY48631.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655626|gb|EFY51928.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660931|gb|EFY57161.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665484|gb|EFY61672.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322667539|gb|EFY63700.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673666|gb|EFY69768.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677592|gb|EFY73656.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679743|gb|EFY75782.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687215|gb|EFY83187.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194002|gb|EFZ79203.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199411|gb|EFZ84504.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202426|gb|EFZ87468.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208861|gb|EFZ93799.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213786|gb|EFZ98566.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217835|gb|EGA02550.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221677|gb|EGA06089.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224737|gb|EGA09005.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229637|gb|EGA13760.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232862|gb|EGA16958.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240102|gb|EGA24146.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242911|gb|EGA26932.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323246826|gb|EGA30796.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252039|gb|EGA35901.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255540|gb|EGA39299.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323261608|gb|EGA45185.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266968|gb|EGA50453.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323272072|gb|EGA55486.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 213 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRAVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +D+ +V +I V + VQ++ + Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|261346039|ref|ZP_05973683.1| dTMP kinase [Providencia rustigianii DSM 4541] gi|282565926|gb|EFB71461.1| dTMP kinase [Providencia rustigianii DSM 4541] Length = 208 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M + FI EG+EGAGKTT I+ + L+ ++ TREPGGTP AE R ++ Sbjct: 1 MKN-QFIVIEGLEGAGKTTAINTVVETLKLAGINEMVFTREPGGTPLAEKLRELIKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D+ +AE ++ AAR+ V+ VI+PAL GK ++ DR SS AYQG + Sbjct: 60 GDKVTDKAELLMLYAARVQLVDTVIKPALAAGKWVIGDRHDLSSQAYQGGGREIDRHLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+ + + + P T+ LDLP ++GL+R ++R LD E++ + E+ R +L Sbjct: 120 SLRNLVLGDFKPSLTLYLDLPPELGLQRARSR------GELDRIEKESLAFFERTRHRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A D +D++ + V T+I + E + K Sbjct: 174 ELAAAD-DTILTIDASQDIEQVQTDIRRTLLEWLGK 208 >gi|323976529|gb|EGB71617.1| thymidylate kinase [Escherichia coli TW10509] Length = 213 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALTNGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ +SV I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLESVMDAIRTTVTNWVKE 210 >gi|259908791|ref|YP_002649147.1| thymidylate kinase [Erwinia pyrifoliae Ep1/96] gi|224964413|emb|CAX55922.1| Thymidylate kinase (DTMP kinase) [Erwinia pyrifoliae Ep1/96] gi|283478770|emb|CAY74686.1| tmk [Erwinia pyrifoliae DSM 12163] Length = 210 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 110/217 (50%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + LQR D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDAVVSELQRHGINDIVFTREPGGTPLAEKLRDLIKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG ++ Sbjct: 60 GERVTNSAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGMNSDLMN 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ + + PD T+ LD+ IGL+R + R LD E++ + + R+ +L Sbjct: 120 CLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A R +D+ + V + + + +Q++ Sbjct: 174 ALASAD-SRIKTIDATRPLEQVTAALQQTLNQWLQEQ 209 >gi|312971234|ref|ZP_07785412.1| thymidylate kinase [Escherichia coli 1827-70] gi|310336436|gb|EFQ01622.1| thymidylate kinase [Escherichia coli 1827-70] Length = 213 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAKDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|145632722|ref|ZP_01788456.1| thymidylate kinase [Haemophilus influenzae 3655] gi|145634547|ref|ZP_01790256.1| thymidylate kinase [Haemophilus influenzae PittAA] gi|229844384|ref|ZP_04464524.1| thymidylate kinase [Haemophilus influenzae 6P18H1] gi|144986917|gb|EDJ93469.1| thymidylate kinase [Haemophilus influenzae 3655] gi|145268092|gb|EDK08087.1| thymidylate kinase [Haemophilus influenzae PittAA] gi|229812633|gb|EEP48322.1| thymidylate kinase [Haemophilus influenzae 6P18H1] Length = 210 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 112/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+N+I+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVDNIIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I V Sbjct: 176 KDNP-KAVMINAEQSIELVQADIERAVKNW 204 >gi|15801215|ref|NP_287232.1| thymidylate kinase [Escherichia coli O157:H7 EDL933] gi|15830730|ref|NP_309503.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai] gi|195938857|ref|ZP_03084239.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4024] gi|208807792|ref|ZP_03250129.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206] gi|208815733|ref|ZP_03256912.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045] gi|208822400|ref|ZP_03262719.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042] gi|209400206|ref|YP_002269942.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115] gi|217328521|ref|ZP_03444603.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588] gi|254792480|ref|YP_003077317.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359] gi|261226998|ref|ZP_05941279.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK2000] gi|261256232|ref|ZP_05948765.1| thymidylate kinase [Escherichia coli O157:H7 str. FRIK966] gi|23821781|sp|Q8X8H6|KTHY_ECO57 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238057697|sp|B5YVW6|KTHY_ECO5E RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12514642|gb|AAG55844.1|AE005319_13 thymidylate kinase [Escherichia coli O157:H7 str. EDL933] gi|13360940|dbj|BAB34899.1| thymidylate kinase [Escherichia coli O157:H7 str. Sakai] gi|208727593|gb|EDZ77194.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4206] gi|208732381|gb|EDZ81069.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4045] gi|208737885|gb|EDZ85568.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4042] gi|209161606|gb|ACI39039.1| thymidylate kinase [Escherichia coli O157:H7 str. EC4115] gi|209773160|gb|ACI84892.1| thymidylate kinase [Escherichia coli] gi|209773162|gb|ACI84893.1| thymidylate kinase [Escherichia coli] gi|209773166|gb|ACI84895.1| thymidylate kinase [Escherichia coli] gi|217318948|gb|EEC27374.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14588] gi|254591880|gb|ACT71241.1| thymidylate kinase [Escherichia coli O157:H7 str. TW14359] gi|320188105|gb|EFW62770.1| Thymidylate kinase [Escherichia coli O157:H7 str. EC1212] gi|326339320|gb|EGD63134.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1125] gi|326340401|gb|EGD64204.1| Thymidylate kinase [Escherichia coli O157:H7 str. 1044] Length = 213 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEIITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMDAIRTTVTRWVKE 210 >gi|148827653|ref|YP_001292406.1| thymidylate kinase [Haemophilus influenzae PittGG] gi|254808296|sp|A5UGW7|KTHY_HAEIG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148718895|gb|ABR00023.1| thymidylate kinase [Haemophilus influenzae PittGG] Length = 210 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIKDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFRRTRARYLALV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I V Sbjct: 176 KDNP-KAVMINAEQSIELVQADIERAVKNW 204 >gi|33152912|ref|NP_874265.1| thymidylate kinase [Haemophilus ducreyi 35000HP] gi|46576466|sp|Q7VKH4|KTHY_HAEDU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33149137|gb|AAP96654.1| thymidylate kinase [Haemophilus ducreyi 35000HP] Length = 214 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGKTT ++ L++ + TREPGGTP AE R+++ + Sbjct: 7 RGKFIVLEGLEGAGKTTAHQIILTQLKQAGIQQIVQTREPGGTPLAEKLRYLIKHEFEEP 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR VENVI+PAL GK +L DR SS AYQG L+SL+ Sbjct: 67 ISPQAELLMLYAARAQLVENVIKPALSAGKWVLGDRHDMSSQAYQGGGRQLDVALLNSLK 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ IGL R LD E++ + + R+ +L + Sbjct: 127 ESVLGPFEPDLTIYLDIDPAIGLARASG------CGELDRIEQQSLDFFYRTRERYLALT 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ ++ I+++ + V +I V + + Sbjct: 181 QHN-EKAVIINAEQPLEKVTNDIQQAVQKFL 210 >gi|298345977|ref|YP_003718664.1| dTMP kinase [Mobiluncus curtisii ATCC 43063] gi|298236038|gb|ADI67170.1| dTMP kinase [Mobiluncus curtisii ATCC 43063] Length = 239 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++FEG +G GKTT I+ +++ + +DV TREPGGT A R +LL G + Sbjct: 30 QGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DV 87 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA++FAA R HV +I PA+ +GK+++ DR+L SS AYQG + L Sbjct: 88 SPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSL 147 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LDL ++ +R SL D ER + ++ R+ FL ++ Sbjct: 148 WATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSE 204 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q D +VD++ +AT + + +L+ Sbjct: 205 GQ-DTWLVVDASLPVAEIATQVRLRLAQLL 233 >gi|332035197|gb|EGI71706.1| thymidylate kinase [Pseudoalteromonas haloplanktis ANT/505] Length = 208 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 112/211 (53%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI EG+EGAGK+T ISL + FL ++ D REPGGTP AE+ R ++ + +E Sbjct: 2 KPKFIVIEGLEGAGKSTAISLCQDFLNKQKIDFINVREPGGTPLAESLRTLVKAEHEEEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR + NVI PAL +G+ +L DR SS AYQG L SL Sbjct: 62 AFETELLIMYAARSQLMHNVITPALDKGQWVLADRHDLSSQAYQGGGRGISSNTLASLSS 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ + PD TI LD+ IGL+R + R LD E++ + ++ R ++++A Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYVELA- 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 N + VD+ S V +I N++ + Sbjct: 175 NDDNTIKTVDANQSIDKVHRDITNVLHSFFE 205 >gi|21674136|ref|NP_662201.1| thymidylate kinase [Chlorobium tepidum TLS] gi|25453084|sp|Q8KCU7|KTHY_CHLTE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21647295|gb|AAM72543.1| thymidylate kinase [Chlorobium tepidum TLS] Length = 214 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 4/213 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ISFEGI+GAGK+T + LKR+LQ + +V REPGGTP AE R +LL D Sbjct: 1 MLISFEGIDGAGKSTQVMKLKRYLQERGREVLALREPGGTPVAEEIRELLLERRND-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++FAA+R + V+ VI+PAL ++ DRF DS+ AYQG L + I+ Sbjct: 60 VGELLLFAASRAELVQQVIQPALENDSDVILDRFFDSTTAYQGYGRGLDLDMLAEINRIA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 ++PD T LDL + L R + SL ES LD E + + + R+ + I Sbjct: 120 SCRLVPDVTFYLDLTPEDALMRKFSEKSLPLAFESEELDRMENSGLDFYRRVREGYHKIG 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R I+D+ S + I++ + L K Sbjct: 180 GENPNRIIIIDALLSPSEIHRKIISSIDALCTK 212 >gi|309782015|ref|ZP_07676745.1| dTMP kinase [Ralstonia sp. 5_7_47FAA] gi|308919081|gb|EFP64748.1| dTMP kinase [Ralstonia sp. 5_7_47FAA] Length = 205 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + LQ K V VTREPGGTP E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTPLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ Q + P TI+ DL +I R+ ++ D FE + + R +L Sbjct: 119 VLERWVQQGLQPTKTILFDLAPEIAAARLA------DARTPDKFEAESAQFFLRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +PDR ++++ + ++ N++ L Sbjct: 173 RRAAAEPDRFVVLNANRERADIQKDLENLLATL 205 >gi|331672613|ref|ZP_08373402.1| dTMP kinase [Escherichia coli TA280] gi|324007852|gb|EGB77071.1| thymidylate kinase [Escherichia coli MS 57-2] gi|331070256|gb|EGI41622.1| dTMP kinase [Escherichia coli TA280] Length = 213 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAQDKS-IHTIDATQPLEAVMGAIRTTVTHWVKE 210 >gi|297563869|ref|YP_003682842.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296848318|gb|ADH70336.1| thymidylate kinase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 707 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI EG EGAGK+T + L +L+ + ++V TR+PG T R +LL Sbjct: 480 AGAFIVVEGGEGAGKSTQVRELTVWLRDQGFEVIGTRQPGATKLGMRLRGLLLDRENSHI 539 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++AA + DHV+ I PAL G +++ DR++DS AYQG + + + Sbjct: 540 TPRAEVLLYAADKADHVQQEILPALRRGAVVISDRYVDSLLAYQGSGRDLSSDEIRRISD 599 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + Q ++PD T++LD+ + GL R+ D E + H++ R+ FL++AR Sbjct: 600 WATQGLVPDLTVLLDVRPEDGLSRL--------GGPADRIEGEPAEFHDRVRRGFLELAR 651 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R ++D+ + I V L+ Sbjct: 652 AAPERYLVLDAREPQDRITREIQRRVRSLL 681 >gi|149201816|ref|ZP_01878790.1| thymidylate kinase [Roseovarius sp. TM1035] gi|149144864|gb|EDM32893.1| thymidylate kinase [Roseovarius sp. TM1035] Length = 208 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF+SFEGI+G+GK+T L L+ K DV +TREPGG+P AE R ++L D + Sbjct: 4 QGLFLSFEGIDGSGKSTQARRLAETLRAKGRDVVLTREPGGSPGAEEIRRLVLEGDKDRW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E VI PAL G +++CDRF DS+ YQG + +D L Sbjct: 64 SAETEILLFTAARRDHLERVIAPALARGAVVICDRFADSTRMYQGLGRADLRGIVDQLHA 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+++D+ +GL R +R FE + + R FL +++ Sbjct: 124 LMI-GREPDLTVLIDIDPGVGLGRALSRGGDEA-----RFESFGEGMQARMRTGFLALSQ 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D A +VA ++ +V + Sbjct: 178 EFPARFTVIDGARDMDAVAEDVARVVQAHL 207 >gi|290560588|pdb|3LV8|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of A Thymidylate Kinase (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Tmp, Thymidine-5'-Diphosphate And Adp gi|297343231|pdb|3N2I|A Chain A, 2.25 Angstrom Resolution Crystal Structure Of A Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In C With Thymidine gi|297343232|pdb|3N2I|B Chain B, 2.25 Angstrom Resolution Crystal Structure Of A Thymidylate (Tmk) From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In C With Thymidine Length = 236 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ LQ+ D TREPGGT AE R ++ Sbjct: 25 MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 83 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 84 GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 143 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 144 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 197 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + D ++D+A S + V +I + + + + Sbjct: 198 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 232 >gi|238897674|ref|YP_002923353.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|259494273|sp|C4K3R2|KTHY_HAMD5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229465431|gb|ACQ67205.1| thymidylate kinase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 210 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 11/216 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLL--SCGV 59 G FI EG+EGAGK+T ++ +++FL+ K DV TREPGGT +E RH++ S Sbjct: 2 KGKFIVIEGLEGAGKSTAVNTVQQFLRHFKIQDVICTREPGGTALSEEIRHLIKKKSQNE 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +AE ++ AAR+ +EN+I+PAL G ++ DR SS AYQG + F+ S Sbjct: 62 EILTDKAELLLLYAARVQLLENIIKPALSSGTWVIGDRHDLSSQAYQGGGRGIKSEFIKS 121 Query: 120 LQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + ++ PD T+ LDLP ++GL+R + R LD E++ ++ E+ R +L Sbjct: 122 LADFTLGSSFRPDLTLYLDLPPELGLQRARKR------GHLDRIEQQSLVFFERIRARYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ + P R ++D++ + V +I N + L++K Sbjct: 176 ELTYDDP-RIKMIDASKPIKKVTVDIQNALLSLLEK 210 >gi|84393882|ref|ZP_00992625.1| thymidylate kinase [Vibrio splendidus 12B01] gi|84375479|gb|EAP92383.1| thymidylate kinase [Vibrio splendidus 12B01] Length = 210 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ D+ TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKAAGVADIVNTREPGGTVLAEKMRSLVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E ++ AAR+ VENVI+PAL GK +L DR SS AYQG ++ Sbjct: 61 GEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARTTME 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+E ++ PD T+ LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 SLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IA D ++++ + VA +I + + K+ Sbjct: 175 EIAGQD-DSVLVINAQQEIEQVAADIKVALSAWLNKQ 210 >gi|323140332|ref|ZP_08075264.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067] gi|322415190|gb|EFY05977.1| dTMP kinase [Phascolarctobacterium sp. YIT 12067] Length = 211 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 10/213 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+GAGKTT L + L+ + YDV +REPGGT AE R ++L + Sbjct: 2 RGFFITFEGIDGAGKTTQQHLAAQALREQGYDVLESREPGGTQLAEKVRALVLDPEL-PL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +++ AAR +HV+ ++RPAL GKI++CDRF DS+ YQG + L+ Sbjct: 61 TTATQTLLYLAARSEHVDKLLRPALEAGKIIICDRFNDSTLVYQGLAQGKAPEEIAQLRR 120 Query: 123 ---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + PD T++ D L R Q R D +E++ + ++ R FL Sbjct: 121 LGAFATGGLEPDLTLVFDADPAELLARRQQR------GVQDRYEQQGLEFQQRLRAGFLQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A +P R ++D+ + Q V +L ++ ++ Sbjct: 175 LAEAEPQRLQVIDALGTQQEVTAKVLQVIGRVI 207 >gi|114762660|ref|ZP_01442094.1| thymidylate kinase [Pelagibaca bermudensis HTCC2601] gi|114544570|gb|EAU47576.1| thymidylate kinase [Roseovarius sp. HTCC2601] Length = 208 Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats. Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 6/207 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFISFEGI+G+GK+T LL L+ +V +TREPGG+P AE R ++L + + Sbjct: 5 TGLFISFEGIDGSGKSTQARLLAEHLRSTGREVVLTREPGGSPGAEEIRALVLQGDPERW 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E IRPAL G ++CDRF DS+ YQG +D+L Sbjct: 65 SAETELLLFTAARRDHLERTIRPALARGATVICDRFADSTRMYQGLSRGDLRGAVDTLHA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + V PD T+++D+ + + + + FE + + +K R FL +A Sbjct: 125 LMI-GVEPDLTLLIDMDPE-----AALARAKARATAEERFEDFGLPLQQKMRAGFLALAA 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 R IVD + ++VA ++ + Sbjct: 179 EFSGRFRIVDGNRAPEAVAQDVRAALQ 205 >gi|218549175|ref|YP_002382966.1| thymidylate kinase [Escherichia fergusonii ATCC 35469] gi|226732661|sp|B7LT40|KTHY_ESCF3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|218356716|emb|CAQ89344.1| thymidylate kinase [Escherichia fergusonii ATCC 35469] gi|324113893|gb|EGC07867.1| thymidylate kinase [Escherichia fergusonii B253] gi|325497596|gb|EGC95455.1| thymidylate kinase [Escherichia fergusonii ECD227] Length = 213 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT +++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVETLEQLGIREMIFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITEKAEVLMFYAARVQLVETVIKPALAKGTWVIGDRHDLSTQAYQGGGRGVDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD T+ LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +D+ S + V +I V V+++ + Sbjct: 179 AQDAS-IRTIDATQSLECVMADIRQTVTTWVKEQGA 213 >gi|315283971|ref|ZP_07871975.1| thymidylate kinase [Listeria marthii FSL S4-120] gi|313612387|gb|EFR86525.1| thymidylate kinase [Listeria marthii FSL S4-120] Length = 208 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 116/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ G +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITXXGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + + Sbjct: 60 EMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMDMEQVLQV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + + Sbjct: 120 NLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQAGYEKV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + PDR VD+ + + + IL + + Sbjct: 176 IKMFPDRFMRVDATKTPEEITETILADILRQL 207 >gi|311065067|ref|YP_003971793.1| thymidylate kinase [Bifidobacterium bifidum PRL2010] gi|310867387|gb|ADP36756.1| Tmk Thymidylate kinase [Bifidobacterium bifidum PRL2010] Length = 250 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 15/209 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL------- 55 +GLFISFEG++G GKTT + L+ +L+ +V VTREPGGT + R +LL Sbjct: 8 TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLRELGDAA 67 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + AEA++FAA R HV V+RPAL G +++ DR+LDSS AYQ Sbjct: 68 EADGTDIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQAGGRELTAD 127 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + L + +MP T +LD+ +R+Q+ D E ++ RQ Sbjct: 128 DVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQH--------DADRMESAGDEFQQRTRQ 179 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204 FLD+A ++P R ++D+A ++V +I Sbjct: 180 AFLDLAGHEPGRFRVIDAAWPIEAVWEHI 208 >gi|323967039|gb|EGB62465.1| thymidylate kinase [Escherichia coli M863] gi|327253496|gb|EGE65134.1| thymidylate kinase [Escherichia coli STEC_7v] Length = 213 Score = 236 bits (602), Expect = 3e-60, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 111/218 (50%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + ++A H +D+ +SV I V V++ Sbjct: 174 YQELAAQDKS-IHTIDATQPLESVMDAIRTTVTNWVKE 210 >gi|257454679|ref|ZP_05619935.1| thymidylate kinase [Enhydrobacter aerosaccus SK60] gi|257447989|gb|EEV22976.1| thymidylate kinase [Enhydrobacter aerosaccus SK60] Length = 213 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 80/207 (38%), Positives = 109/207 (52%), Gaps = 10/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FISFEG EG GK+T I+ L +L + D TREPGG+P AE R +LL Sbjct: 12 KFISFEGTEGVGKSTLIANLAAYLTAQGIDFIQTREPGGSPFAEQLRAMLLDPATT-MTE 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEI 123 ++E ++ AAR DHV VI PAL +G+ +LCDRF DS+ AYQG L ++ + Sbjct: 71 DSELLLMFAARADHVAQVILPALAQGQWVLCDRFTDSTIAYQGFGRKQGDRAELSKIELL 130 Query: 124 SVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V MPD TI LDLPV G+ R +NR LD FE+ + E+ Q F A Sbjct: 131 IRHFVAKMPDMTIWLDLPVTEGMSRAKNR------GKLDRFEQNQLAFFERVHQGFAYQA 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +P R +D+ + V +L + Sbjct: 185 QQEPQRVKRIDAQGTPDEVLAKVLTQL 211 >gi|304390265|ref|ZP_07372219.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315657530|ref|ZP_07910412.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|304326747|gb|EFL93991.1| thymidylate kinase [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315492002|gb|EFU81611.1| thymidylate kinase [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 239 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF++FEG +G GKTT I+ +++ + +DV TREPGGT A R +LL G + Sbjct: 30 QGLFVAFEGCDGVGKTTQITRAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--DV 87 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA++FAA R HV +I PA+ +GK+++ DR+L SS AYQG + L Sbjct: 88 SPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGAREIRDLSL 147 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++P+ T++LDL ++ +R SL D ER + ++ R+ FL ++ Sbjct: 148 WATGGLVPNLTVLLDLDPEVAAERQAADASL---GGPDRMERAGIEFQKRVREDFLRMSE 204 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q D +VD++ +AT + + +L+ Sbjct: 205 GQ-DTWLVVDASLPVAEIATQVRLRLAQLL 233 >gi|224283541|ref|ZP_03646863.1| Thymidylate kinase [Bifidobacterium bifidum NCIMB 41171] gi|310288198|ref|YP_003939457.1| Thymidylate kinase [Bifidobacterium bifidum S17] gi|313140695|ref|ZP_07802888.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171] gi|309252135|gb|ADO53883.1| Thymidylate kinase [Bifidobacterium bifidum S17] gi|313133205|gb|EFR50822.1| thymidylate kinase [Bifidobacterium bifidum NCIMB 41171] Length = 244 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 111/209 (53%), Gaps = 15/209 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 +GLFISFEG++G GKTT + L+ +L+ +V VTREPGGT + R +LL D Sbjct: 2 TGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLREPGDAA 61 Query: 61 -----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + AEA++FAA R HV V+RPAL G +++ DR+LDSS AYQ Sbjct: 62 EADGADIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQAGGRELTAD 121 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + L + +MP T +LD+ +R+Q+ D E ++ RQ Sbjct: 122 DVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQH--------DADRMESAGDEFQQRTRQ 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNI 204 FLD+A ++P R ++D+A ++V +I Sbjct: 174 AFLDLAGHEPGRFRVIDAAWPIEAVWEHI 202 >gi|182678512|ref|YP_001832658.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039] gi|182634395|gb|ACB95169.1| dTMP kinase [Beijerinckia indica subsp. indica ATCC 9039] Length = 237 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 115/212 (54%), Gaps = 1/212 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG EG GK+T L + + TREPGG+P AE R +LLS + Sbjct: 20 TRGFFITLEGGEGTGKSTQARKLVARFEAQGLRAIATREPGGSPNAEILRDILLSGVIKP 79 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G AEA++F+AAR+DH++ VI+PAL G ++ DRF DS+ YQG + L L+ Sbjct: 80 LGPLAEALMFSAARIDHLDQVIKPALAAGTTVVSDRFADSTRVYQGVAGNLDPHRLTLLE 139 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI 180 + + +PD T++LDL + GL R R + +S D FE +D+ H + R+ F + Sbjct: 140 QAVLNGTVPDLTLVLDLAPETGLARAAARRANIDSGDGPDRFESEDLTYHRRLREAFRAL 199 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +P RC ++D+ S V + + + + Sbjct: 200 PKREPGRCLLIDADASADIVTERLWTAIQQRL 231 >gi|323175251|gb|EFZ60864.1| thymidylate kinase [Escherichia coli LT-68] Length = 213 Score = 235 bits (601), Expect = 3e-60, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 112/218 (51%), Gaps = 12/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ +E VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLIETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLKRARAR------GELDRIEQESFDFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +L++A H +D+ ++V I V V++ Sbjct: 174 YLELAAKDKS-IHTIDATQPLEAVMDAIRTTVTHWVKE 210 >gi|170289496|ref|YP_001739734.1| dTMP kinase [Thermotoga sp. RQ2] gi|238688806|sp|B1L821|KTHY_THESQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|170176999|gb|ACB10051.1| dTMP kinase [Thermotoga sp. RQ2] Length = 197 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 15/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T I LL ++L+++ V + REPGGT E R +LL +E Sbjct: 1 MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILL---EEEVTP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A+R V I+ L EG +L DR+ DSS AYQG + ++ L +++ Sbjct: 58 KAELFLFLASRNLLVTE-IKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDLA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T +D+ V+ LKR L+ FE++ E R+ +L +AR Sbjct: 117 TDGLIPDLTFYIDVDVETALKR---------KGELNRFEKR--EFLEHVREGYLVLAREH 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P+R ++D S + + +++ V Sbjct: 166 PERIVVLDGKRSIEEIHRDVVREVER 191 >gi|241663065|ref|YP_002981425.1| thymidylate kinase [Ralstonia pickettii 12D] gi|240865092|gb|ACS62753.1| thymidylate kinase [Ralstonia pickettii 12D] Length = 205 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 +G FI+FEGI+GAGK+TH++ + LQ K V VTREPGGT E R VLL Sbjct: 2 TGKFITFEGIDGAGKSTHLAWFAQQLQAKLAPLGKKVVVTREPGGTSLGERLREVLLH-- 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E EA++ A R +H+ VI+PAL G ++ DRF D+++AYQG L+ Sbjct: 60 -ERMHLETEALLMFAGRREHIAEVIQPALDAGDWVISDRFTDATFAYQGGGRGLAIDRLE 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ Q + P TI+ DL +I R+ ++ D FE + + R +L Sbjct: 119 VLERWVQQGLQPTKTILFDLAPEIAAARLA------DARTPDKFEAESAQFFLRTRAEYL 172 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +PDR ++++ + ++ N++ L Sbjct: 173 RRAAAEPDRFVVLNANRERADIQKDLENVLATL 205 >gi|148272108|ref|YP_001221669.1| hypothetical protein CMM_0928 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|166221738|sp|A5CPG8|KTHY_CLAM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147830038|emb|CAN00966.1| tmkA [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 211 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+FI+ EG +G GK+T +LL+ +L+ + ++V VTREPGG+ R ++L Sbjct: 2 TGVFITLEGGDGVGKSTQSALLRGWLEDEGHEVVVTREPGGSELGVEIREIVLHRRG-HI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA+++AA R HVE V+RPAL G ++L DR+LDSS AYQG + L Sbjct: 61 APRAEALLYAADRAHHVETVVRPALDRGAVVLQDRYLDSSVAYQGAGRVLDAGEIRELSL 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + Q ++PD T++LDL R+ + D E + HE+ RQ FL +A Sbjct: 121 WAAQGLLPDLTVLLDLDQAAARVRLDAART-----RFDRLESERADFHERVRQAFLGLAG 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +VD+A + +A I L+ Sbjct: 176 AEPERFLVVDAARPREEIAAAIRTRAQALI 205 >gi|319898025|ref|YP_004136222.1| thymidylate kinase [Haemophilus influenzae F3031] gi|317433531|emb|CBY81914.1| thymidylate kinase [Haemophilus influenzae F3031] Length = 219 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKYETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTAKAELLMLYAARVQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + PD TI LD+ +GL R + R LD E+ D+ + R +L + Sbjct: 131 ETVLGNFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLGFFHRTRARYLALV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ + V +I + V Sbjct: 185 KDNP-KAVVINAEQRIELVQADIESAVKNW 213 >gi|171463583|ref|YP_001797696.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193121|gb|ACB44082.1| dTMP kinase [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 211 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 79/208 (37%), Positives = 116/208 (55%), Gaps = 16/208 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGV 59 ++G FISFEGI+GAGK+THI + +Q + N +V +TREPGGT E R++LL Sbjct: 4 HTGYFISFEGIDGAGKSTHIDAFRNLIQERYPNIEVVMTREPGGTVLGEQLRNLLLD--- 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA++ AAR +H+ VI+PAL GKI++ DRF D+S+AYQG L+ Sbjct: 61 TPMNLETEALLMFAARREHLSQVIKPALTAGKIIISDRFTDASFAYQGGGRGLSLAKLND 120 Query: 120 LQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L+ + P+ TI+ DLP DI R D FE+ D+ E+ R Sbjct: 121 LERWVQGQPDGSILQPNLTILFDLPGDIAEARRSK------VHTPDKFEKMDLSFFERVR 174 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVAT 202 Q +L A++ PDR H+VD+ + +++ Sbjct: 175 QEYLRRAKDDPDRFHLVDATQTPEAIWN 202 >gi|139439946|ref|ZP_01773283.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC 25986] gi|133774712|gb|EBA38532.1| Hypothetical protein COLAER_02321 [Collinsella aerofaciens ATCC 25986] Length = 227 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 6/204 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG++GAGK+T LL R L+ Y V REPGGT +E R +LL G Sbjct: 10 FITLEGVDGAGKSTQARLLARALELAGYQVVSLREPGGTAISEKIRALLLDPANTAMGDT 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +++ AAR V VI PAL GK++LCDRF DS+ YQ D + ++V Sbjct: 70 CELLLYEAARAQLVHEVIAPALAAGKVVLCDRFYDSTTCYQAFADGLDRQMVRDANNLAV 129 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 P T++ + + R+ +R D E K + E+ Q F IA +P Sbjct: 130 AGTHPALTLVYHITPEQAALRMADR------GAADRMEAKGMAFQERVYQGFCAIAAEEP 183 Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209 +R ++D+ + + V + V Sbjct: 184 NRVKLIDATATIEEVFAKTVEQVR 207 >gi|264677746|ref|YP_003277652.1| thymidylate kinase [Comamonas testosteroni CNB-2] gi|262208258|gb|ACY32356.1| thymidylate kinase [Comamonas testosteroni CNB-2] Length = 229 Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats. Identities = 73/220 (33%), Positives = 111/220 (50%), Gaps = 21/220 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ GLFISFEGI+GAGK++HI L + + + V +TREPGGTP AE R ++L D Sbjct: 5 LSKGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLH---D 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA++ AAR DH+ VI PAL G++++ DRF D+++AYQG L +L Sbjct: 62 AMDPLTEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSLEQLSAL 121 Query: 121 QEISVQEV------------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + ++ PD T+ DLP ++ +R+ + D FE + Sbjct: 122 ERMAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAERLAT------ARVPDRFEAQPGE 175 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + Q + + AR P R +D+ S +V I V Sbjct: 176 FFARVAQGYAERARTAPQRFVRIDAHASRHAVWQQITQAV 215 >gi|85713264|ref|ZP_01044288.1| Thymidylate kinase [Idiomarina baltica OS145] gi|85692908|gb|EAQ30882.1| Thymidylate kinase [Idiomarina baltica OS145] Length = 205 Score = 234 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 7/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F+ EG+EGAGK++ ++ + LQ K REPGGTP AEA R ++ ++ Sbjct: 3 GKFVVIEGLEGAGKSSAMASVVSHLQAKGIRTETVREPGGTPMAEAIRSLVKQRWEEQVQ 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ A+R+ V+ VI PAL +G ++ DR SS AYQG L+ L++I Sbjct: 63 PATELLLMYASRVQLVKTVIEPALEQGAWVIGDRHDLSSQAYQGGGRELGAELLEKLKDI 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ +PD T+ LD+ + GL+R + R LD E +D+ + R +L++A+ Sbjct: 123 ALGSFVPDLTLYLDVDEETGLQRARGR------GELDRIEEEDIEFFRRTRTRYLELAKR 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+ I+++ +V IL + E + Sbjct: 177 DPN-IVIINANQEMLNVHQAILRALEEHL 204 >gi|315126343|ref|YP_004068346.1| thymidylate kinase [Pseudoalteromonas sp. SM9913] gi|315014857|gb|ADT68195.1| thymidylate kinase [Pseudoalteromonas sp. SM9913] Length = 208 Score = 234 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 110/209 (52%), Gaps = 7/209 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI EG+EGAGK+T I+L + FL + D REPGGTP AE+ R ++ + +E Sbjct: 2 KPKFIVIEGLEGAGKSTAIALCQDFLNHHHIDFINVREPGGTPLAESLRTLVKAEHQEEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR + NVI PAL +G+ +L DR SS AYQG L SL Sbjct: 62 AFETELLIMYAARSQLMHNVINPALEQGQWVLADRHDLSSQAYQGGGRGISANTLASLSS 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ + PD TI LD+ IGL+R + R LD E++ + ++ R ++++A Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYIELA- 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 N D VD+ S V +I N++ Sbjct: 175 NDDDSIKTVDANQSIDKVHRDITNVLRTF 203 >gi|149184555|ref|ZP_01862873.1| thymidylate kinase [Erythrobacter sp. SD-21] gi|148831875|gb|EDL50308.1| thymidylate kinase [Erythrobacter sp. SD-21] Length = 209 Score = 234 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG EG GK+T LL+ L+++ +V +TREPGGTP AEA R +LL + Sbjct: 1 MRKGKFIAFEGGEGMGKSTQARLLRDALEQRGIEVELTREPGGTPGAEAIREMLLHPPGE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +GA+AEA++FAAAR DHV +IRPA+ G+ ++CDRFLDSS AYQG + L Sbjct: 61 GWGAQAEALLFAAARADHVARLIRPAVEAGRWVVCDRFLDSSRAYQGSAGELGDEQVRKL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 EI ++PD TI++ D R++ R + D +D H + F Sbjct: 121 HEIGTGGLLPDLTIVIGAHSDEVSARLRAR----DGDTSDAIGGRDETYHRSVNKAFERF 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +P+R +D + S + V I+ + L+ Sbjct: 177 AEEEPNRFARIDGSGSIEDVHVRIMTALAGLL 208 >gi|57641338|ref|YP_183816.1| thymidylate kinase [Thermococcus kodakarensis KOD1] gi|73920827|sp|Q5JH21|KTHY_PYRKO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|57159662|dbj|BAD85592.1| thymidylate kinase [Thermococcus kodakarensis KOD1] Length = 205 Score = 234 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 119/216 (55%), Gaps = 18/216 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 +FI EGI+GAGK+T LL + + + Y+V +T+EP TP + R ++L+ G + Sbjct: 1 MFIVLEGIDGAGKSTQAKLLAEWFENRGYEVVLTKEPTDTPFGKLIRRLVLTGGKEGIID 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + EAEA++FAA R +HV+ +I+P+L GK+++ DR+ SS AYQ R L L+ Sbjct: 61 GAKISHEAEALLFAADRAEHVDKLIKPSLEAGKVVISDRYFYSSLAYQWARG----LDLE 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L +++ V PD +LDLPV + R+++R E + + K R+ +L Sbjct: 117 WLIDLNRFAVKPDIVFLLDLPVKESMNRIRSRKVKSEFDKI-------FELQRKVRENYL 169 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A P+ I+++ ++V I+ ++ L+ + Sbjct: 170 KLAEMFPE-MKIINAMEDVETVHNQIIALIETLLGE 204 >gi|300716239|ref|YP_003741042.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661] gi|299062075|emb|CAX59191.1| Thymidylate kinase (DTMP kinase) [Erwinia billingiae Eb661] Length = 210 Score = 234 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 113/213 (53%), Gaps = 9/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62 FI EG+EGAGKTT ++ L+ + D+ TREPGGTP AE R ++ + Sbjct: 4 KFIVIEGLEGAGKTTARDVVVATLREQGISDIVFTREPGGTPLAEKLRDLIKQGIDGERV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + L+ Sbjct: 64 TDQAELLMLYAARVQLVENVIKPALASGAWVVGDRHDLSSQAYQGGGRGMDIALMSQLKH 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + E PD TI LD+ +IGL+R + R LD E++ + + RQ +L++A Sbjct: 124 SVLGEFAPDMTIYLDVTPEIGLQRARAR------GELDRIEQESLNFFIRTRQRYLELAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R VD+ S + V+ +I ++ ++++ Sbjct: 178 SD-SRIQTVDATQSIEQVSASIRQVLVAWLKEQ 209 >gi|88705167|ref|ZP_01102879.1| Thymidylate kinase [Congregibacter litoralis KT71] gi|88700862|gb|EAQ97969.1| Thymidylate kinase [Congregibacter litoralis KT71] Length = 244 Score = 234 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 6/199 (3%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +S ++ L+ D+ TREPGGT E R LL+ AE ++ A Sbjct: 44 GAGKSTAMSYIEERLRDAGVDLICTREPGGTSLGEQLRETLLAPTEAGIAPLAELLMMFA 103 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 AR H+ I PAL G+ +LCDRF D++YAYQG + + L+E ++ PD T Sbjct: 104 ARAQHLSECILPALRRGQWVLCDRFTDATYAYQGAGRNMGEAPVALLEEFVQGDLRPDVT 163 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 ++LD+P D+GL R + R LD FE +D+ E+ RQ +L AR R I+D+ Sbjct: 164 LLLDVPADLGLSRARGR------GALDRFELEDLAFFERVRQSYLSRARRSSGRYQIIDA 217 Query: 194 AHSFQSVATNILNIVWELV 212 + V + +V +L+ Sbjct: 218 SAELADVERALQAVVKDLI 236 >gi|292487960|ref|YP_003530837.1| thymidylate kinase [Erwinia amylovora CFBP1430] gi|292899179|ref|YP_003538548.1| thymidylate kinase [Erwinia amylovora ATCC 49946] gi|291199027|emb|CBJ46138.1| thymidylate kinase [Erwinia amylovora ATCC 49946] gi|291553384|emb|CBA20429.1| Thymidylate kinase [Erwinia amylovora CFBP1430] Length = 210 Score = 234 bits (599), Expect = 5e-60, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 107/217 (49%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCG- 58 MN G FI EG+EGAGKTT + LQR D+ TREPGGTP AE R ++ Sbjct: 1 MN-GKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMV 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GERVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMS 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ + + P T+ LD+ ++GL+R + R LD E++ + + R +L Sbjct: 120 CLKQAVLGDFAPHLTLYLDVTPELGLQRARAR------GELDRIEQESLNFFTRTRDRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A R VD+ V + + + +Q++ Sbjct: 174 ALASAD-SRIKTVDATQPLAQVTAALQQTLNQWLQEQ 209 >gi|317047712|ref|YP_004115360.1| thymidylate kinase [Pantoea sp. At-9b] gi|316949329|gb|ADU68804.1| thymidylate kinase [Pantoea sp. At-9b] Length = 211 Score = 234 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 110/214 (51%), Gaps = 10/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58 M S FI EG+EGAGKTT + L+ + D + TREPGGTP AE R ++ Sbjct: 1 MKS-KFIVIEGLEGAGKTTARDAVVEVLREQGIDDLVFTREPGGTPLAEQLRVLVKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEQVTDKAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDTQLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + PDCT+ LD+ +IGL+R + R LD E++ + E+ R+ +L Sbjct: 120 TLRDAVLGAFRPDCTLYLDVTPEIGLQRARAR------GELDRIEQESLRFFERTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A P +D+ + V +I + + Sbjct: 174 ALAAADPS-IITIDATQTLPEVTASIKAAIHHWL 206 >gi|261253405|ref|ZP_05945978.1| thymidylate kinase [Vibrio orientalis CIP 102891] gi|260936796|gb|EEX92785.1| thymidylate kinase [Vibrio orientalis CIP 102891] Length = 209 Score = 234 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 M + FI EG+EGAGK++ I+ + L++ D TREPGGT AE R ++ Sbjct: 1 MTNAKFIVIEGLEGAGKSSAINAVLETLKQSGVDAITNTREPGGTALAEKLRTLVKQEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 61 GEQLQDMTELLLMYAARVQLVENVIKPALTSGTWVVGDRHDMSSQAYQGGGRKIPAATML 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD TI LD+ +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 ALKQTTLGDFKPDLTIYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A + +V++ VA +I N++ ++ Sbjct: 175 QLAEQD-ESVVVVNAEQDIDKVAADISNVLTSWMK 208 >gi|308235275|ref|ZP_07666012.1| thymidylate kinase [Gardnerella vaginalis ATCC 14018] gi|311114155|ref|YP_003985376.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019] gi|310945649|gb|ADP38353.1| thymidylate kinase [Gardnerella vaginalis ATCC 14019] Length = 233 Score = 234 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 10/212 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +N GLFISFEGI+G GKTT + L+ FLQ + +V VTREPGGTP E R++LL G Sbjct: 13 LNKGLFISFEGIDGVGKTTQVEALRDFLQARGLEVVVTREPGGTPLGEQLRNILLHGGA- 71 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA++FAA R H +I PAL G +++ DR++DSS AYQ + L Sbjct: 72 -ISARTEALLFAADRAQHAAQIIIPALRRGAVVITDRYIDSSLAYQSGGRELTMQDVRDL 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + + P+ T +LD+ R+ D E + + R+ FLD+ Sbjct: 131 SEWASNCLWPNRTYLLDMSEKDAAVRLH--------GQADRMESAGLDFARRTREAFLDL 182 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A+ R ++D+ ++ I + EL+ Sbjct: 183 AKQNAQRFCVLDATLPACDLSKLIAKDMCELM 214 >gi|37520247|ref|NP_923624.1| thymidylate kinase [Gloeobacter violaceus PCC 7421] gi|46576425|sp|Q7NMT7|KTHY_GLOVI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|35211240|dbj|BAC88619.1| thymidylate kinase [Gloeobacter violaceus PCC 7421] Length = 212 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 5/215 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG EG GKTT ++LL +L+++ + V TREPGGT + R +LL E Sbjct: 1 MFITFEGGEGCGKTTQLTLLGDWLEKRCHRVVRTREPGGTALGRSLRGLLLD-ARSEITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++A R +H+ V+RPAL G +LCDRF DS+ AYQG ++ L I+ Sbjct: 60 TAELLLYATDRAEHLARVVRPALASGAAVLCDRFSDSTVAYQGYGRGLDLGLIERLNAIA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++PD T L L GL R D E + + H++ F +A Sbjct: 120 TGGLLPDLTFWLKLDPQAGL----VRRLASNGNTPDRIEAETLAFHQRVHMGFAALANRY 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 P R VD+ S ++ A I + V + + S L Sbjct: 176 PGRIRPVDAGLSVEATAEQIRSAVDVFLNENQSKL 210 >gi|307298997|ref|ZP_07578799.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915422|gb|EFN45807.1| thymidylate kinase [Thermotogales bacterium mesG1.Ag.4.2] Length = 209 Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 7/211 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FIS EGI+G GKTT I LL +L + + + + REPGGT A E R +LL F Sbjct: 1 MFISVEGIDGCGKTTQIKLLAEYLSQLDVEFIIVREPGGTKAGEEIRDILLHKEYHLFS- 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E+E ++F AAR V VIRP L +GK ++ DRF+DSS AYQG + ++ + Sbjct: 60 ESELLLFMAARAQIVREVIRPELEKGKTVIADRFMDSSVAYQGVGRRLGREIVQAMNAFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V +PD T +D+P D+ + R++ D E ++ E+ R+ + + Sbjct: 120 VGGTVPDITFYIDVPTDVAISRMRKEKKN------DKIEMENFDFFERVREGYEKLMVEN 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +R +D S + V T+I + L K+ Sbjct: 174 RERFVRIDGKQSEEKVQTDIRKSLRVLFHKK 204 >gi|213864741|ref|ZP_03386860.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 213 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 112/216 (51%), Gaps = 11/216 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG L +L+ Sbjct: 65 ITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T+ LD+ ++GLKR + R LD E++ + R +L++A Sbjct: 125 DAVLGVFSPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +D+ +V +I V + VQ++ + Sbjct: 179 AQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 213 >gi|331701730|ref|YP_004398689.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929] gi|329129073|gb|AEB73626.1| Thymidylate kinase [Lactobacillus buchneri NRRL B-30929] Length = 216 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G FI+FEG +GAGKT+ ++ + ++ + VTREPGG +E R V+L Sbjct: 1 MN-GKFITFEGPDGAGKTSVMNRVIEVFNQEIGDQLLVTREPGGNKISEEIRKVILDREN 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E EA+++AAAR H+ I PAL + K++LCDR++DSS AYQG + Sbjct: 60 TEMDYRTEALLYAAARRQHLVETILPALKQNKLVLCDRYVDSSVAYQGAGRQIGMAQVAK 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E + ++++P TI D+PVD+GL R+ R+ + +D + + H++ + ++ Sbjct: 120 MNEFATEKLLPFKTIYFDIPVDVGLDRIA---EHRDRSKIDRLDVETNEFHKRVHEGYMK 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + DR +D+ V + + I+ ++ Sbjct: 177 VRDENADRFISIDATQPINRVVNDTIKIIHQI 208 >gi|271500137|ref|YP_003333162.1| thymidylate kinase [Dickeya dadantii Ech586] gi|270343692|gb|ACZ76457.1| thymidylate kinase [Dickeya dadantii Ech586] Length = 214 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 10/219 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKT+ +++ L+ D + TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTSAHAVVVETLREFGIDDIVFTREPGGTPLAEKLRTLIKQGVA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VENVIRPAL G ++ DR SS AYQG + Sbjct: 60 EEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGMDPQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ + PD T+ LD+P ++GLKR + R LD E++ + E+ R + Sbjct: 120 LLRDTVLGTFRPDLTLYLDIPPELGLKRARQR------GELDRIEQESLAFFERTRARYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +A + VD++ + V +I ++ + +Q+ + Sbjct: 174 QLAAAD-NSIVTVDASRGLEQVNADIRRVLRDWLQQLIG 211 >gi|311279996|ref|YP_003942227.1| thymidylate kinase [Enterobacter cloacae SCF1] gi|308749191|gb|ADO48943.1| thymidylate kinase [Enterobacter cloacae SCF1] Length = 213 Score = 234 bits (598), Expect = 7e-60, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 12/221 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M+S +I EG+EGAGKTT ++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MHS-KYIVIEGLEGAGKTTARDVVVETLEQMGIRDLLFTREPGGTILAEKLRSLVLDIRS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL GK ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALAAGKWVIGDRHDLSTQAYQGGGRGIDPQM 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +L++ + + PD T+ LD+ ++GL R + R LD E++ + + R Sbjct: 120 LATLRDAVLGDFRPDLTLYLDVTPEVGLGRARARGD------LDRIEQESLNFFNRTRAR 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +L++A H +D+ V I + V VQ++ + Sbjct: 174 YLELAAQDAS-IHTIDATQPLDDVMRAIRDTVTRWVQEQGA 213 >gi|86148586|ref|ZP_01066870.1| thymidylate kinase [Vibrio sp. MED222] gi|85833615|gb|EAQ51789.1| thymidylate kinase [Vibrio sp. MED222] Length = 210 Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ D+ TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E ++ AAR+ VENVI+PAL GK +L DR SS AYQG ++ Sbjct: 61 GEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARTTME 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+E ++ PD T+ LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 SLKETTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IA D ++++ + VA +I + + K+ Sbjct: 175 EIAGQD-DSVLVINAQQELEQVAADIKVALSAWLNKQ 210 >gi|218709023|ref|YP_002416644.1| thymidylate kinase [Vibrio splendidus LGP32] gi|218322042|emb|CAV18087.1| Thymidylate kinase [Vibrio splendidus LGP32] Length = 210 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 113/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ D+ TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKTAGVADIVNTREPGGTVLAEKMRSLVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E ++ AAR+ VENVI+PAL GK +L DR SS AYQG ++ Sbjct: 61 GEKLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARSTME 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+ ++ PD T+ LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 SLKATTLGGFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IA D ++++ + VA +I + + K+ Sbjct: 175 EIAGQD-DSVLVINAQQEIEQVAADIKVALSAWLNKQ 210 >gi|110598215|ref|ZP_01386491.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031] gi|110340130|gb|EAT58629.1| Thymidylate kinase [Chlorobium ferrooxidans DSM 13031] Length = 212 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 4/212 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L +L +V REPGGT AE R +LL + Sbjct: 1 MLITFEGIDGAGKSTQIKKLVSYLADSGREVLTLREPGGTEVAEKIRLILLESRHE-ISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + + VI+PAL E KI++ DRF DS+ AYQG L S+ IS Sbjct: 60 VGELLLFSASRAELIHEVIKPALAENKIVILDRFFDSTTAYQGYGRGIDLELLRSIIAIS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R ++ +S+ LD ER + ++ RQ +L+I Sbjct: 120 TCGITPDITFYLDIKPEEALSRKFSAKSIPLAFDSSELDRMERSGLQFYQNVRQGYLNIL 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + R +++ + + I+ ++ E +Q Sbjct: 180 KESNGRMFCLNALEKPEEIHRRIIALLHERLQ 211 >gi|260776328|ref|ZP_05885223.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450] gi|260607551|gb|EEX33816.1| thymidylate kinase [Vibrio coralliilyticus ATCC BAA-450] Length = 209 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 113/216 (52%), Gaps = 9/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLL-SCG 58 M FI EG+EGAGK+T I+ + L++ + + TREPGGT AE R ++ Sbjct: 1 MTQAKFIVIEGLEGAGKSTAINAVLETLKQAGIEQIKNTREPGGTALAEQLRTLVKQDHE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 61 GEELQDMTELLLMYAARVQLVENVIKPALNSGTWVVGDRHDMSSQAYQGGGRQISQHTMT 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD TI LDL IGL+R + R LD E+ D+ ++ R +L Sbjct: 121 ALKQTTLGDFKPDLTIYLDLDPRIGLERARGR------GELDRIEKMDMSFFDRTRARYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A+ ++++ + + VA +I + +++ Sbjct: 175 ELAQCDSS-VVVINAEQTIELVAQDIKQALRSWLEQ 209 >gi|310767311|gb|ADP12261.1| thymidylate kinase [Erwinia sp. Ejp617] Length = 210 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + LQR D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDAIVSELQRHGINDIVFTREPGGTPLAEKLRDLIKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG ++ Sbjct: 60 GERITDSAELLMLYAARVQLVENVIKPALARGSWVVGDRHDLSSLAYQGGGRGMNSDLMN 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ + + PD T+ LD+ IGL+R + R LD E++ + + R+ +L Sbjct: 120 CLKQAVLGDFSPDLTLYLDVTPQIGLQRARAR------GELDRIEQESLNFFTRTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A +D+ + V + + + +Q++ Sbjct: 174 ALASAD-SCIKTIDATRPLEQVTAALQQTLNQWLQEQ 209 >gi|56478513|ref|YP_160102.1| thymidylate kinase [Aromatoleum aromaticum EbN1] gi|56314556|emb|CAI09201.1| Thymidylate kinase [Aromatoleum aromaticum EbN1] Length = 210 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 103/206 (50%), Gaps = 8/206 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+FEGI+GAGK++ I+ + L+ + V TREPGGT E R + Sbjct: 9 RFITFEGIDGAGKSSQIAAVVALLEARGLCVEQTREPGGTALGERLRE---LLLHEPMHL 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E EA++ AAR +H+ I PAL G+ ++ DRF D++YAYQ +L+ Sbjct: 66 ETEALLMFAARREHLAARILPALAAGRWVVSDRFSDATYAYQVGGRGLDPAKFAALEAWV 125 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD T++ DLP ++ R+ A D FER+ E+ R +L+ AR Sbjct: 126 HPGFQPDLTLVFDLPPEVAAARLAK-----GGAEPDRFEREQRDFFERVRAAYLERARMA 180 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P R I+D+ + +S+ + IV E Sbjct: 181 PGRIRIIDAGGTAESIRAEVEAIVEE 206 >gi|309972387|gb|ADO95588.1| Thymidylate kinase [Haemophilus influenzae R2846] Length = 219 Score = 234 bits (597), Expect = 9e-60, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L + DV TREPGGTP AE RH++ + Sbjct: 11 KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 71 VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 131 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 184 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I V Sbjct: 185 KDNP-KAVMINAEQSIELVQADIERAVKNW 213 >gi|11991874|gb|AAG42374.1|AF294440_6 thymidylate kinase [Xanthomonas albilineans] Length = 226 Score = 234 bits (597), Expect = 1e-59, Method: Composition-based stats. Identities = 75/200 (37%), Positives = 104/200 (52%), Gaps = 13/200 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----- 59 F+S EG EGAGKTT I+ ++ +LQ + ++V +TREPGGTP AE R +LL Sbjct: 10 RFVSLEGGEGAGKTTAINAIRDWLQAQGHEVVLTREPGGTPLAERIRGLLLDMAPSSPET 69 Query: 60 --DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + AE E ++ AAR HV VIRPAL G ++ DRF DSSYAYQGE ++ Sbjct: 70 AVERLSAETELLLVFAARAQHVREVIRPALQRGAYVVSDRFTDSSYAYQGEGRGLDRAWI 129 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L+ +V + P T++LDL V IG R R D E + ++ R F Sbjct: 130 ADLERRAV-GLQPGLTLLLDLDVQIGRARTSGRDL-----WPDRIESEQDDFFQRVRAGF 183 Query: 178 LDIARNQPDRCHIVDSAHSF 197 A P R ++D++ Sbjct: 184 RQRATQDPQRFRVIDASQPP 203 >gi|304413841|ref|ZP_07395258.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus Regiella insecticola LSR1] gi|304283561|gb|EFL91956.1| putative aminodeoxychorismate lyase and dTMP kinase [Candidatus Regiella insecticola LSR1] Length = 603 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M +G FI EG+EGAGKTT + + L+ D+ REPGGTP AE R ++ Sbjct: 387 MITGKFIVIEGLEGAGKTTAGETVAQVLRANGINDIVQPREPGGTPVAEKLRELIKQRID 446 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D +AE ++ AAR+ +ENVI+PAL G ++ DR SS AYQG + Sbjct: 447 SDPLTDKAEVLMLYAARVQLIENVIKPALARGTWVVGDRHDLSSQAYQGGGRDVDSKLMT 506 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + PD T+ LD+ + GL RV+ R D E++ + + + +L Sbjct: 507 SLRDSLLGSFRPDLTLYLDISPEQGLARVRLR------GSPDRIEQESLAFFTRVHERYL 560 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + ++++A V+ I + + ++ Sbjct: 561 KLVAGDSN-IKMINAAQPLAQVSAEIRRELEKWLE 594 >gi|145589149|ref|YP_001155746.1| dTMP kinase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047555|gb|ABP34182.1| thymidylate kinase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 214 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 78/206 (37%), Positives = 114/206 (55%), Gaps = 16/206 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FISFEGI+GAGK+THI K+ +Q + + +V +TREPGGTP E R++LL Sbjct: 9 GFFISFEGIDGAGKSTHIESFKKLMQERYPDREVVMTREPGGTPLGEQLRNLLLDA---P 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E EA++ AAR +H+ +I PAL+ GKI++ DRF D+S+AYQG L+ L+ Sbjct: 66 MNLETEALLMFAARREHIAQIIEPALLAGKIVISDRFTDASFAYQGGGRGLSLAKLNDLE 125 Query: 122 EISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + P+ TI+ DLP +I R D FE+ D++ EK RQ Sbjct: 126 QWVQGRADGKLLQPNLTILFDLPGEIAQARRSK------VRTPDKFEKLDLVFFEKVRQE 179 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVAT 202 +L A P R H VD+ + +++ Sbjct: 180 YLRRALEDPSRFHKVDATQTPEAIWN 205 >gi|319787591|ref|YP_004147066.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1] gi|317466103|gb|ADV27835.1| thymidylate kinase [Pseudoxanthomonas suwonensis 11-1] Length = 223 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 12/218 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----- 59 +S EG EGAGK+T ++ ++ L + ++V TREPGGTP AE R +LL+ Sbjct: 10 RLVSLEGGEGAGKSTALAAVRELLAARGHEVVQTREPGGTPLAERIRELLLARSAPGQDV 69 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + E ++ AAR HV V+RPAL G ++ DRF DSSYAYQG ++ Sbjct: 70 AEPLHPQTELLLMFAARAQHVAEVVRPALERGAFVVSDRFTDSSYAYQGAGRGLDPRWIA 129 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ +V + P T++LDL V G R R D E + E+ R+ F Sbjct: 130 DLEQRTV-GMRPGLTLLLDLDVRQGRARTSGRDLF-----PDRIESEQDEFFERVRRGFR 183 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A+ +P+R ++D+A Q+V ++ V + ++V Sbjct: 184 QRAQAEPERFALIDAAQPPQAVGHDVAAAVAAWLDRQV 221 >gi|253996507|ref|YP_003048571.1| thymidylate kinase [Methylotenera mobilis JLW8] gi|253983186|gb|ACT48044.1| thymidylate kinase [Methylotenera mobilis JLW8] Length = 201 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 9/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EG++GAGK+THI+ + + L + +V TREPGGT E R D Sbjct: 4 KFITLEGMDGAGKSTHIADIIKALSARGVEVVSTREPGGTELGERLRE---LLLHDAMHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++ AAR +H+ NVI PAL G +L DRF D++YAYQ ++ L+ Sbjct: 61 ETETLLMFAARREHIANVIAPALARGAYVLSDRFTDATYAYQCGAKGVLASKIEQLELWV 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD T++ D+PV++ ++R+ + D FER+ + R +L A+ Sbjct: 121 QESLQPDLTLLFDVPVEVSMQRLSA------ARAPDKFERESADFFTRIRNAYLQRAQQN 174 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P R ++DS VA +++ + Sbjct: 175 PARFKVIDSNRPLDEVAQSVMQAIASF 201 >gi|312796386|ref|YP_004029308.1| Thymidylate kinase [Burkholderia rhizoxinica HKI 454] gi|312168161|emb|CBW75164.1| Thymidylate kinase (EC 2.7.4.9) [Burkholderia rhizoxinica HKI 454] Length = 218 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 13/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCG 58 G FI+FEGI+GAGKTTH++ L + V VTREPGGTP EA R +LL Sbjct: 15 RGKFITFEGIDGAGKTTHLTWFCDRLSERAARQGASVIVTREPGGTPLGEALRDILL--- 71 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E EA++ AAR +H+ VI P L G +L DRF D+++AYQG L Sbjct: 72 RQPMHLETEALLMFAARREHIAAVIEPTLARGDWVLSDRFTDATFAYQGGGRGLSIDKLQ 131 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ + PD T++ D+P + R R R D FE + + R +L Sbjct: 132 VLEQWVQAGLQPDRTVLFDVPTETASAR---RGGAR---APDKFESESDAFFARTRAEYL 185 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P R IVD+ S V + I+ L Sbjct: 186 RRTAQAPARFAIVDATCSIAEVREQLEAILLTL 218 >gi|310830718|ref|YP_003965819.1| Thymidylate kinase [Paenibacillus polymyxa SC2] gi|309250185|gb|ADO59751.1| Thymidylate kinase [Paenibacillus polymyxa SC2] Length = 210 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 4/201 (1%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 S EG EGAGK+ I +K +TREPGG AE R ++L E Sbjct: 2 SLEGGEGAGKSLVIQAIKDHFAESGKPYLITREPGGIEIAEKIRTIILEPSHTSMDGRTE 61 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A+++AAAR H+ + PA+ +G ++CDRF+DSS YQG + L + +++ Sbjct: 62 ALLYAAARRQHLVEKVFPAINQGTTVICDRFIDSSLVYQGYARGLGFETILELNQFAIEG 121 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 MPD TI LD+ +GL+R+ +R + RE ++ + + V HEK + + P+R Sbjct: 122 CMPDVTIWLDVDPKVGLERI-SRNNERE---VNRLDLESVRFHEKVHMGYQILHAMYPER 177 Query: 188 CHIVDSAHSFQSVATNILNIV 208 H +D+ + + V +++ ++ Sbjct: 178 IHKIDANQTPEDVVKDVIKVI 198 >gi|148980539|ref|ZP_01816112.1| thymidylate kinase [Vibrionales bacterium SWAT-3] gi|145961192|gb|EDK26507.1| thymidylate kinase [Vibrionales bacterium SWAT-3] Length = 210 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN FI EG+EGAGK+T I+ + L+ + + TREPGGT AE R ++ Sbjct: 1 MNQSKFIVVEGLEGAGKSTAINAIVETLKASGVEELVNTREPGGTVLAEKMRSLVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E ++ AAR+ VENVI+PAL GK +L DR SS AYQG ++ Sbjct: 61 GEQLQDMTELLLMYAARVQLVENVIKPALDSGKWVLGDRHDMSSQAYQGGGRQIARTTME 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+ ++ + PD T+ LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 SLKATTLGDFKPDLTLYLDLDPRVGLERARGR------GELDRIEKMDISFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IA D ++++ + VA +I + + ++ Sbjct: 175 EIAAQD-DSVLVINAEQEIEQVAADIKQALSTWLDQQ 210 >gi|85059043|ref|YP_454745.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans'] gi|123519602|sp|Q2NU35|KTHY_SODGM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|84779563|dbj|BAE74340.1| thymidylate kinase [Sodalis glossinidius str. 'morsitans'] Length = 213 Score = 233 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EG+GKT+ I+ + L+ + DV TREPGGTP AEA R ++ G Sbjct: 1 MNS-KFIVIEGLEGSGKTSAIAQVVDVLREQGIRDVVFTREPGGTPLAEALRTLIKDGVG 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG L Sbjct: 60 EEPVTDRAELLMLYAARVQLVEGVIKPALARGAWVVGDRHDLSSQAYQGGGRGMDARLLQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + + PD T+ LD+P +GL R + R LD E + + ++ R + Sbjct: 120 TLRDAVLGDFRPDLTLYLDIPPALGLARARAR------GELDRIEVESLAFFDRTRARYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A DR +D++ +V+ + + + + ++ + Sbjct: 174 ALAAAD-DRMVTLDASQPLAAVSAALRHQLTQWLRAQ 209 >gi|257066619|ref|YP_003152875.1| thymidylate kinase [Anaerococcus prevotii DSM 20548] gi|256798499|gb|ACV29154.1| thymidylate kinase [Anaerococcus prevotii DSM 20548] Length = 209 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 109/212 (51%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I FEG +G+GKTT I+ +K+ L++ + REPGGTP +E R +++ ++ Sbjct: 2 TGKLIVFEGPDGSGKTTVINEVKKRLKKDQIEYLDFREPGGTPISEKIREIIIDNDNEDM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++FAA+R +E IRPAL +GK+++CDRF+ SS YQG + + + Sbjct: 62 TSRCECLLFAASRAQLIEEKIRPALEKGKLVICDRFVLSSLLYQGVGRGLGIEKVKVIND 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + D TI D+ L R + +S D E +D H K +LDI Sbjct: 122 FATENTKADLTIFFDIDYKTALVRKRANFSA------DRLESEDFDFHRKIFDAYLDITE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D VD+ S V ++ ++++ +++ Sbjct: 176 RYKDEIKRVDATKSIDEVTDQVMELIYKSLEE 207 >gi|317495399|ref|ZP_07953768.1| thymidylate kinase [Gemella moribillum M424] gi|316914458|gb|EFV35935.1| thymidylate kinase [Gemella moribillum M424] Length = 208 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 7/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EG +G+GKTT I+ +L +K Y V TREPGGT +E R +L + Sbjct: 2 KGKFITVEGSDGSGKTTFINSATEYLIKKGYKVITTREPGGTVFSEKVRELLFDSSNE-I 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E+++F +R DH+ I P + EG I++CDRF+DSS AYQ + + + Sbjct: 61 DAKTESLLFCVSRRDHIIKKIIPYVEEGYIVICDRFVDSSIAYQSYGRGLNKQDIIDINK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ ++ V+IGL R + R + + + + ++ ++ + +++ Sbjct: 121 YTTDGLEPDLTLYFNVDVEIGLSRTKGRDEN------NRMDNESLKFYKDVKRGYDELSN 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + R ++D+ ++ V + I+ + Sbjct: 175 DYKKRIKVIDANQDYEKVEKDAFKILEGFLN 205 >gi|304397225|ref|ZP_07379104.1| thymidylate kinase [Pantoea sp. aB] gi|304355374|gb|EFM19742.1| thymidylate kinase [Pantoea sp. aB] Length = 210 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + L+ + D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDAIVATLRARGINDLVFTREPGGTPLAEQLRTLVKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 60 GEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSELMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + + PD T+ LD+ DIGL+R + R LD E++ + E+ R +L Sbjct: 120 TLRDAVLGDFRPDLTLYLDVTPDIGLQRARAR------GELDRIEQESLRFFERTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A + P +D+ S + V ++ + + ++ Sbjct: 174 TLAADDP-TILTIDATQSLEEVTASLKATLDSWLAEQ 209 >gi|27469219|ref|NP_765856.1| dTMP kinase [Staphylococcus epidermidis ATCC 12228] gi|57866011|ref|YP_187716.1| thymidylate kinase [Staphylococcus epidermidis RP62A] gi|251809790|ref|ZP_04824263.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060] gi|282875412|ref|ZP_06284284.1| dTMP kinase [Staphylococcus epidermidis SK135] gi|293366124|ref|ZP_06612811.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)] gi|38258101|sp|Q8CQT7|KTHY_STAES RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920830|sp|Q5HRS3|KTHY_STAEQ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|27316768|gb|AAO05943.1|AE016751_238 dTMP kinase [Staphylococcus epidermidis ATCC 12228] gi|57636669|gb|AAW53457.1| thymidylate kinase [Staphylococcus epidermidis RP62A] gi|251806658|gb|EES59315.1| dTMP kinase [Staphylococcus epidermidis BCM-HMP0060] gi|281295769|gb|EFA88291.1| dTMP kinase [Staphylococcus epidermidis SK135] gi|291319718|gb|EFE60077.1| thymidylate kinase [Staphylococcus epidermidis M23864:W2(grey)] gi|329723942|gb|EGG60467.1| dTMP kinase [Staphylococcus epidermidis VCU144] gi|329733036|gb|EGG69375.1| dTMP kinase [Staphylococcus epidermidis VCU028] gi|329737878|gb|EGG74106.1| dTMP kinase [Staphylococcus epidermidis VCU045] Length = 203 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 113/208 (54%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ I + L ++ YD+ TREPGG +E R ++L D Sbjct: 4 FITFEGPEGAGKTSVIKKVSERLAKE-YDIVTTREPGGVLTSEEIRRIVLDG--DSIDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ I P+L GKI+LCDR++DSS AYQG + L E ++ Sbjct: 61 TEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ +IG +R+ L+ + + ++++ HEK + + + + P Sbjct: 121 NGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEEKAFHEKVIEGYQKVISDNP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 R V++ HS V + + ++ Sbjct: 176 HRFIKVNANHSLDKVVEETYQSIIKYLK 203 >gi|300867280|ref|ZP_07111940.1| Thymidylate kinase [Oscillatoria sp. PCC 6506] gi|300334757|emb|CBN57106.1| Thymidylate kinase [Oscillatoria sp. PCC 6506] Length = 217 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 11/216 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-----NYDVHVTREPGGTPAAEAARHVLLSCG 58 G I FEG+EG+GKTT I + +L K + VTREPGGT + R +LL G Sbjct: 3 GKLIVFEGVEGSGKTTQIERSRLWLLSKENHCKVPQIVVTREPGGTDLGKGLRGLLLESG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE +++AA R HVE V++P L +G I+LCDRF DS+ AYQG ++ Sbjct: 63 GENICDRAELLLYAADRAQHVEAVLKPELAKGSIVLCDRFTDSTIAYQGYGRGLSLSLIN 122 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L EI+ + D T+ LDL V++GL+RV+ R D E+ D+ H + +Q F Sbjct: 123 QLNEIATLGLQSDLTLWLDLEVEVGLRRVKRR------GVSDRIEQADLEFHRRVQQGFA 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D+A DR VD+ S + V+ I +I ++ Sbjct: 177 DLATANRDRIIRVDANRSEEEVSEEIHHIFTRKLKD 212 >gi|297579520|ref|ZP_06941448.1| thymidylate kinase [Vibrio cholerae RC385] gi|297537114|gb|EFH75947.1| thymidylate kinase [Vibrio cholerae RC385] Length = 212 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ LQ+ D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 60 GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD T+ LD+ +GL+R + R LD E+ + E+ R+ +L Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMGISFFERARERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + D ++D+A S + V +I + + + + Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208 >gi|146311269|ref|YP_001176343.1| thymidylate kinase [Enterobacter sp. 638] gi|166987703|sp|A4W9B2|KTHY_ENT38 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145318145|gb|ABP60292.1| thymidylate kinase [Enterobacter sp. 638] Length = 213 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 113/214 (52%), Gaps = 11/214 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT +++ L+ + + TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARNVVVDTLKELGIEQMVFTREPGGTQLAEKLRSLVLDIKSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F AAR+ VE VI+PAL EG+ ++ DR S+ AYQG L +L+ Sbjct: 65 IDVKAEVLMFYAARVQLVETVIKPALAEGQWVIGDRHDLSTQAYQGGGRGIDQQMLATLR 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + P+ T+ LD+ ++GLKR + R LD E++ + + R +L++A Sbjct: 125 NAVLGDFRPNLTLYLDVTPEVGLKRARAR------GELDRIEQESLDFFNRTRARYLELA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D +D+ S + V +I + +Q++ Sbjct: 179 AQD-DSIRTIDATQSLEGVTRSIRETITAWLQEQ 211 >gi|229819159|ref|YP_002880685.1| thymidylate kinase [Beutenbergia cavernae DSM 12333] gi|229565072|gb|ACQ78923.1| thymidylate kinase [Beutenbergia cavernae DSM 12333] Length = 210 Score = 233 bits (595), Expect = 2e-59, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 112/211 (53%), Gaps = 10/211 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F+SFEG +GAGKTT + LL ++++ +V TREPGGT R ++L ++ Sbjct: 7 GVFVSFEGGDGAGKTTQLELLATWIEQAGREVVRTREPGGTAIGRTLRDLVLHG--EDVD 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A EA+++A R HV +++RPAL G ++L DR++DSS AYQ + L Sbjct: 65 ARTEALLYATDRAHHVASLVRPALARGAVVLTDRYVDSSLAYQAGGRELAADDVRRLSMW 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +V +MPD TI+LDL R+ +A D ER H + R+ +L +A Sbjct: 125 AVDGLMPDVTILLDLDPAHLPARL--------TAAPDRLERAGSAFHVRTREAYLGLAAR 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P+R ++D+A +A + V + + Sbjct: 177 EPERWLVLDAALGRAELAAQVRARVAPRLGR 207 >gi|15642018|ref|NP_231650.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590849|ref|ZP_01678174.1| thymidylate kinase [Vibrio cholerae 2740-80] gi|121728860|ref|ZP_01681870.1| thymidylate kinase [Vibrio cholerae V52] gi|147673617|ref|YP_001217543.1| thymidylate kinase [Vibrio cholerae O395] gi|153216421|ref|ZP_01950456.1| thymidylate kinase [Vibrio cholerae 1587] gi|153819691|ref|ZP_01972358.1| thymidylate kinase [Vibrio cholerae NCTC 8457] gi|153822936|ref|ZP_01975603.1| thymidylate kinase [Vibrio cholerae B33] gi|153827018|ref|ZP_01979685.1| thymidylate kinase [Vibrio cholerae MZO-2] gi|153830262|ref|ZP_01982929.1| thymidylate kinase [Vibrio cholerae 623-39] gi|227082143|ref|YP_002810694.1| thymidylate kinase [Vibrio cholerae M66-2] gi|229507895|ref|ZP_04397400.1| thymidylate kinase [Vibrio cholerae BX 330286] gi|229511870|ref|ZP_04401349.1| thymidylate kinase [Vibrio cholerae B33] gi|229519006|ref|ZP_04408449.1| thymidylate kinase [Vibrio cholerae RC9] gi|229521928|ref|ZP_04411345.1| thymidylate kinase [Vibrio cholerae TM 11079-80] gi|229524026|ref|ZP_04413431.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426] gi|229607440|ref|YP_002878088.1| thymidylate kinase [Vibrio cholerae MJ-1236] gi|254849103|ref|ZP_05238453.1| thymidylate kinase [Vibrio cholerae MO10] gi|255745235|ref|ZP_05419184.1| thymidylate kinase [Vibrio cholera CIRS 101] gi|262148995|ref|ZP_06028141.1| thymidylate kinase [Vibrio cholerae INDRE 91/1] gi|262167963|ref|ZP_06035663.1| thymidylate kinase [Vibrio cholerae RC27] gi|298497954|ref|ZP_07007761.1| thymidylate kinase [Vibrio cholerae MAK 757] gi|14285518|sp|Q9KQI2|KTHY_VIBCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|172047643|sp|A5F6P9|KTHY_VIBC3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|254808314|sp|C3LNW7|KTHY_VIBCM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|9656560|gb|AAF95164.1| thymidylate kinase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547300|gb|EAX57420.1| thymidylate kinase [Vibrio cholerae 2740-80] gi|121628868|gb|EAX61326.1| thymidylate kinase [Vibrio cholerae V52] gi|124114280|gb|EAY33100.1| thymidylate kinase [Vibrio cholerae 1587] gi|126509757|gb|EAZ72351.1| thymidylate kinase [Vibrio cholerae NCTC 8457] gi|126519547|gb|EAZ76770.1| thymidylate kinase [Vibrio cholerae B33] gi|146315500|gb|ABQ20039.1| thymidylate kinase [Vibrio cholerae O395] gi|148874275|gb|EDL72410.1| thymidylate kinase [Vibrio cholerae 623-39] gi|149739137|gb|EDM53426.1| thymidylate kinase [Vibrio cholerae MZO-2] gi|227010031|gb|ACP06243.1| thymidylate kinase [Vibrio cholerae M66-2] gi|227013913|gb|ACP10123.1| thymidylate kinase [Vibrio cholerae O395] gi|229337607|gb|EEO02624.1| thymidylate kinase [Vibrio cholerae bv. albensis VL426] gi|229340853|gb|EEO05858.1| thymidylate kinase [Vibrio cholerae TM 11079-80] gi|229343695|gb|EEO08670.1| thymidylate kinase [Vibrio cholerae RC9] gi|229351835|gb|EEO16776.1| thymidylate kinase [Vibrio cholerae B33] gi|229355400|gb|EEO20321.1| thymidylate kinase [Vibrio cholerae BX 330286] gi|229370095|gb|ACQ60518.1| thymidylate kinase [Vibrio cholerae MJ-1236] gi|254844808|gb|EET23222.1| thymidylate kinase [Vibrio cholerae MO10] gi|255737065|gb|EET92461.1| thymidylate kinase [Vibrio cholera CIRS 101] gi|262023690|gb|EEY42391.1| thymidylate kinase [Vibrio cholerae RC27] gi|262031227|gb|EEY49845.1| thymidylate kinase [Vibrio cholerae INDRE 91/1] gi|297542287|gb|EFH78337.1| thymidylate kinase [Vibrio cholerae MAK 757] gi|327484551|gb|AEA78958.1| Thymidylate kinase [Vibrio cholerae LMA3894-4] Length = 212 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ LQ+ D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 60 GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + D ++D+A S + V +I + + + + Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208 >gi|319793761|ref|YP_004155401.1| thymidylate kinase [Variovorax paradoxus EPS] gi|315596224|gb|ADU37290.1| thymidylate kinase [Variovorax paradoxus EPS] Length = 218 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 106/213 (49%), Gaps = 14/213 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLF++ EGI+GAGK++H+ ++ + + V TREPGGTP AE R ++L Sbjct: 1 MSEGLFLTLEGIDGAGKSSHLDAMEALFKAQGRTVVRTREPGGTPLAETLRGLIL---EQ 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+++ AAR DH+ VI PAL G ++LCDRF D+++AYQG L +L Sbjct: 58 PMDPLTESLLVFAARRDHIVQVIEPALARGDLVLCDRFTDATFAYQGAGRGFDAAVLSTL 117 Query: 121 QEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + + P T+ DL +I +R+ + D FE + V + Q Sbjct: 118 EQWAQGGRAEGLLQPHITLWFDLAPEIAAQRLAG------ARVPDKFEAQPVEFFRRVAQ 171 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + D A R +D++ + V I + Sbjct: 172 GYADRADADAQRFIRIDASQARDQVWQQIETAL 204 >gi|254292084|ref|ZP_04962859.1| thymidylate kinase [Vibrio cholerae AM-19226] gi|150421990|gb|EDN13962.1| thymidylate kinase [Vibrio cholerae AM-19226] Length = 212 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ LQ+ D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 60 GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + D ++D+A S + V +I + + + + Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208 >gi|260584572|ref|ZP_05852318.1| dTMP kinase [Granulicatella elegans ATCC 700633] gi|260157595|gb|EEW92665.1| dTMP kinase [Granulicatella elegans ATCC 700633] Length = 211 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 69/202 (34%), Positives = 106/202 (52%), Gaps = 4/202 (1%) Query: 10 EGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG +GAGKTT I L L+ + N + TREPGG+ AE R ++L E EA Sbjct: 2 EGPDGAGKTTVIEKLIPLLEERTNVTITSTREPGGSRIAEDIRQIILDVQNVEMDVRTEA 61 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 I++AAAR H+ + I P L +G I+ CDRF+DSS YQG + L + + Sbjct: 62 ILYAAARRQHLTDRILPNLEKGGIVFCDRFVDSSLVYQGVARGIGIEEVYQLNQFATAGK 121 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD T+ LD+P +IGL+R+ + + + D +++ + H+ RQ +LDI P+R Sbjct: 122 TPDVTLYLDVPAEIGLERI---HLAKGNRQFDRLDQEGLQFHKMVRQGYLDIIPTDPERF 178 Query: 189 HIVDSAHSFQSVATNILNIVWE 210 +D+ + V L + + Sbjct: 179 IQIDATKTVDEVVQECLTALVD 200 >gi|153802880|ref|ZP_01957466.1| thymidylate kinase [Vibrio cholerae MZO-3] gi|124121598|gb|EAY40341.1| thymidylate kinase [Vibrio cholerae MZO-3] Length = 212 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ LQ+ D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 60 GEELKDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + D ++D+A S + V +I + + + + Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208 >gi|229528965|ref|ZP_04418355.1| thymidylate kinase [Vibrio cholerae 12129(1)] gi|229332739|gb|EEN98225.1| thymidylate kinase [Vibrio cholerae 12129(1)] Length = 212 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ LQ+ D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 60 GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTALGAFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + D ++D+A S + V +I + + + + Sbjct: 174 ELANSD-DSVVMIDAAQSIEQVTADIRRALQDWLSQ 208 >gi|254468768|ref|ZP_05082174.1| thymidylate kinase [beta proteobacterium KB13] gi|207087578|gb|EDZ64861.1| thymidylate kinase [beta proteobacterium KB13] Length = 201 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 10/208 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EGI+GAGK+TH+ ++ +L +KN +TREPGGT E R +LL D+ Sbjct: 4 FITVEGIDGAGKSTHLEFIQSYLNKKNIQNKLTREPGGTEIGEKLRQLLLH---DDMDVG 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR +H+ VI+PAL ++CDRF D+SYAYQ F+ SL+E+ Sbjct: 61 TETMMMFAARHEHLITVIQPALQSNISIICDRFTDASYAYQQGGKGIDKSFVKSLEELVH 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD T + DL D R+ N LD FE++ R+++L++A+ Sbjct: 121 PNLTPDLTFLFDLDPDTAHSRISN------ERNLDKFEKQSSTFFNGVRKVYLELAKAH- 173 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 R H++DS+ + + I + ELV+ Sbjct: 174 SRFHVIDSSQTIDQIQQVISKKLDELVK 201 >gi|121604849|ref|YP_982178.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2] gi|120593818|gb|ABM37257.1| thymidylate kinase [Polaromonas naphthalenivorans CJ2] Length = 260 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 74/239 (30%), Positives = 114/239 (47%), Gaps = 31/239 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFISFEGI+GAGK+THI+ L Q + V +TREPGGT AE R+++L D Sbjct: 31 SQGLFISFEGIDGAGKSTHIAGLADAFQSEGRAVTLTREPGGTLLAEKLRNMVLD---DA 87 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E+++ AAR DH+ VI PAL+ G ++LCDRF D+++AYQG L +L+ Sbjct: 88 MDPLTESLLIFAARRDHLVRVIAPALLRGDVVLCDRFTDATFAYQGAGRGFDVKVLATLE 147 Query: 122 EISVQE--------------------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + P T+ DLP + R+ +S D Sbjct: 148 RWVQSGEGLLGDPAGNQPMKPEVETVIEPHLTVWFDLPPEEAALRLA------DSRVPDR 201 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE--LVQKRVSP 218 FE + V + + + + P+R +D++ + ++V I + E +Q P Sbjct: 202 FESQPVEFFRRVARGYAERQLGHPERFARIDASQNREAVWQGIRQVFVEKGWLQAAALP 260 >gi|50954227|ref|YP_061515.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07] gi|59798229|sp|Q6AGT5|KTHY_LEIXX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|50950709|gb|AAT88410.1| thymidylate kinase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 210 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 106/204 (51%), Gaps = 7/204 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+ EG +G GK+T +LL+R+L V TREPGGT R ++L D Sbjct: 7 RPGLFITLEGGDGVGKSTQAALLERWLLGLGRAVVRTREPGGTDLGAEIREIVLHRRGD- 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA+++AA R HV V+RPAL G+++L DR+LDSS AYQG + L Sbjct: 66 IAPRAEALLYAADRAHHVATVVRPALERGEVVLQDRYLDSSVAYQGAGRVLDAGEVRELS 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + ++PD TI+LDL R+ + + D E + H + R +L +A Sbjct: 126 LWAAEGLLPDLTILLDLDETTARARLGSART-----RYDRLEAERSEFHARVRAAYLALA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL 205 +P R +VD++ + +A I Sbjct: 181 A-EPQRFLVVDASRPVEEIAAEIR 203 >gi|119469414|ref|ZP_01612353.1| thymidylate kinase [Alteromonadales bacterium TW-7] gi|119447278|gb|EAW28547.1| thymidylate kinase [Alteromonadales bacterium TW-7] Length = 208 Score = 232 bits (594), Expect = 2e-59, Method: Composition-based stats. Identities = 74/212 (34%), Positives = 112/212 (52%), Gaps = 7/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI EG+EGAGK+T ISL + FL +K + REPGGTP AE+ R ++ + +E Sbjct: 2 KPKFIVVEGLEGAGKSTAISLCQDFLNKKQIEYINVREPGGTPLAESLRTLVKAEHKEEI 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E ++ AAR + NVI PAL +GK +L DR SS AYQG L SL Sbjct: 62 AFETELLIMYAARSQLMHNVINPALEQGKWILADRHDLSSQAYQGGGRGISSNTLASLSS 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ + PD TI LD+ IGL+R + R LD E++ + ++ R +L++A Sbjct: 122 MVLKGLKPDLTIYLDIDPVIGLERAKGR------GELDRIEQEAIEFFQRTRMRYLELAS 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + VD+ V +I N++ ++ Sbjct: 176 DD-NSIKTVDANQEIDKVHRDITNVLRTFFEE 206 >gi|221068068|ref|ZP_03544173.1| dTMP kinase [Comamonas testosteroni KF-1] gi|220713091|gb|EED68459.1| dTMP kinase [Comamonas testosteroni KF-1] Length = 229 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 108/218 (49%), Gaps = 21/218 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFISFEGI+GAGK++HI L + + + V +TREPGGTP AE R ++L D Sbjct: 7 KGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTPLAEKLRALMLH---DAM 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++ AAR DH+ VI PAL G++++ DRF D+++AYQG L L+ Sbjct: 64 DPLTEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSVLER 123 Query: 123 ISVQEV------------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++ PD T+ DLP ++ +R+ + D FE + Sbjct: 124 MAQTGTALQAESSPDFMREPDMTLWFDLPAEVAAERLTT------ARVPDRFEAQPGEFF 177 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + Q + + AR P R +D+ S +V I + Sbjct: 178 ARVAQGYAERARTAPQRFVRIDAHASRHAVWQQITQAL 215 >gi|315229969|ref|YP_004070405.1| thymidylate kinase [Thermococcus barophilus MP] gi|315182997|gb|ADT83182.1| thymidylate kinase [Thermococcus barophilus MP] Length = 209 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 122/219 (55%), Gaps = 19/219 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+FI EGI+GAGK+T LL ++ +++ Y+V +T+EP T + R ++L+ G + Sbjct: 2 GIFIVIEGIDGAGKSTQAKLLAKWFEKRGYNVVLTKEPTDTAFGKLIRKLVLTGGREGII 61 Query: 61 ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + EAEA++FAA R +HV+ +I P+L GK+++ DR+ SS AYQ R L L Sbjct: 62 DGAKISHEAEALLFAADRAEHVKKLIEPSLRTGKVVISDRYFYSSLAYQWARG----LDL 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L ++ + PD I+LDLPV +KR+ R E D + +K R+ + Sbjct: 118 EWLINLNKFAIRPDLVILLDLPVKESMKRINGRQLKSE---FDRI----AELQKKVRENY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQKR 215 L + P+ IV++ S + + +I+ +V E++ K+ Sbjct: 171 LKLVEMFPE-MKIVNALASIEDIHNDIVALVEHEILNKK 208 >gi|114327739|ref|YP_744896.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1] gi|114315913|gb|ABI61973.1| thymidylate kinase [Granulibacter bethesdensis CGDNIH1] Length = 250 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 113/221 (51%), Gaps = 7/221 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG FI+ EG EGAGK+T L L+ VTREPGGT AE R +LL + Sbjct: 34 SSGRFITLEGGEGAGKSTQTRALAEALESLGIRTLVTREPGGTEGAEQLRSLLLYGP--D 91 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AE ++ AAR HV IRPAL +G +LCDR+ DS+ AYQG + + +L Sbjct: 92 WDGLAETLLHFAARAQHVARTIRPALEQGIWVLCDRYYDSTMAYQGYCQGADRQRIAALS 151 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + P+ T++LD PV+ ++R+ R A D +ER E+ R FLDIA Sbjct: 152 AW--LGLDPEVTLVLDAPVEASVQRLATRSGTLTVA--DRYERLGKPFFEQVRAAFLDIA 207 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLSS 221 + P RC ++D V L + E + R++P + Sbjct: 208 ASSPQRCVVLDGIRPPAEVTRMALAALAEKLGDPRLAPAAG 248 >gi|148825264|ref|YP_001290017.1| thymidylate kinase [Haemophilus influenzae PittEE] gi|229846542|ref|ZP_04466650.1| thymidylate kinase [Haemophilus influenzae 7P49H1] gi|254808295|sp|A5UA33|KTHY_HAEIE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148715424|gb|ABQ97634.1| thymidylate kinase [Haemophilus influenzae PittEE] gi|229810635|gb|EEP46353.1| thymidylate kinase [Haemophilus influenzae 7P49H1] Length = 210 Score = 232 bits (593), Expect = 3e-59, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 113/210 (53%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L + DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELAIQDVVFTREPGGTPLAEKLRHLIKHETEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ V+NVI+PALM+GK ++ DR SS AYQG F+ +L+ Sbjct: 62 VTHKAELLMLYAARIQLVDNVIKPALMQGKWVVGDRHDMSSQAYQGGGRQLDPHFMLTLK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI LD+ +GL R + R LD E+ D+ + R +L++ Sbjct: 122 ETVLGDFEPDLTIYLDIDPIVGLARARGR------GELDRIEQMDLDFFHRTRARYLELV 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ P + ++++ S + V +I V Sbjct: 176 KDNP-KAVMINAEQSIELVQADIERAVKNW 204 >gi|254785815|ref|YP_003073244.1| dTMP kinase [Teredinibacter turnerae T7901] gi|259494282|sp|C5BU64|KTHY_TERTT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|237685419|gb|ACR12683.1| dTMP kinase [Teredinibacter turnerae T7901] Length = 205 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 114/210 (54%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI+ EG EG GK+T+++ ++ FL+ + DV TREPGGTP AE R +LL+ + Sbjct: 2 TGRFITVEGTEGVGKSTNLAFIEGFLRSRAIDVITTREPGGTPLAEELRELLLAKREEPV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A AE ++ AAR H+ ++ PAL G+ +LCDRF D++YAYQG + L+ Sbjct: 62 DACAELLMVFAARAQHLNQLVAPALARGQWVLCDRFTDATYAYQGAGRGLSLETISKLEF 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ V +GL+R + R LD FE +DV E+ R + A Sbjct: 122 LVQGSLQPDITVWLDIDVRLGLERARARAD------LDRFEEEDVSFFERVRAGYRARAE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R +++ V T+I + + Sbjct: 176 EAPARFCRINAGQPLAQVQTDIQRALEAFL 205 >gi|86742981|ref|YP_483381.1| thymidylate kinase [Frankia sp. CcI3] gi|86569843|gb|ABD13652.1| thymidylate kinase [Frankia sp. CcI3] Length = 730 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 9/219 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EGI+GAGK+T + LL+ +L +V VT E GGT R +LL Sbjct: 505 GLFIAIEGIDGAGKSTQVELLRTWLASSGREVVVTSESGGTALGTGLRELLLDP-TVRLH 563 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++ AA R +HV VI PAL G I++ DR++DS A+Q + L L + Sbjct: 564 PRTEALLTAADRAEHVAQVIEPALARGAIVITDRYVDSFIAFQSVSQALSTDELSVLTQW 623 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQ--------NRYSLRESACLDYFERKDVMIHEKRRQ 175 + ++PD T++LDLP +I L+R + + + + + R Sbjct: 624 ATHALLPDVTVLLDLPAEIVLRRARMTAYPDPPPGPPGPPDGPAEADDAGKLTFQGRVRD 683 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 F +A+ +PDR +D+ S + + I + + + + Sbjct: 684 TFRRLAQKEPDRYLPLDATRSPEEIHAEIRSFMASRIDR 722 >gi|238920255|ref|YP_002933770.1| thymidylate kinase [Edwardsiella ictaluri 93-146] gi|259494269|sp|C5B8G5|KTHY_EDWI9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238869824|gb|ACR69535.1| thymidylate kinase, putative [Edwardsiella ictaluri 93-146] Length = 213 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 108/215 (50%), Gaps = 9/215 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62 FI EG+EGAGKTT ++ L+R +V TREPGGTP AE R ++ + Sbjct: 4 KFIVIEGLEGAGKTTARDVVVDELRRHGIPEVVFTREPGGTPLAEHLRTLVKEGVDGETL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 TDRAEVLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHLMQTLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+P GL+R ++R LD ER+ + E+ R +L +A Sbjct: 124 TVLGDFKPDLTLYLDIPPQQGLERARSR------GELDRIERESLAFFERTRARYLALAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +D+ + V+ I + + + + Sbjct: 178 VD-ETIVTLDAGQPLEQVSAAIRQALRAWLASQEA 211 >gi|85706301|ref|ZP_01037395.1| thymidylate kinase [Roseovarius sp. 217] gi|85669074|gb|EAQ23941.1| thymidylate kinase [Roseovarius sp. 217] Length = 208 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 113/210 (53%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLF+SFEGI+G+GK+T L L+ DV +TREPGG+P AE R ++L D + Sbjct: 4 QGLFLSFEGIDGSGKSTQARRLAEALRGVGRDVVLTREPGGSPGAEEIRRLVLEGDKDRW 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E VI PAL G +++CDRF DS+ YQG S +D L Sbjct: 64 SAETEILLFTAARRDHLERVIAPALDRGAVVICDRFADSTRMYQGLGRSDLRGLVDQLHG 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+++D+ +GL R +R FE + + R FL +A+ Sbjct: 124 LMI-GREPDLTVLIDIDPGVGLGRALSRGGAEA-----RFESFGEGMQARMRAGFLALAQ 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R ++D A +VA ++ +V + Sbjct: 178 EFAPRFAVIDGAGDLDAVAEDVARVVQAHL 207 >gi|317492364|ref|ZP_07950793.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919703|gb|EFV41033.1| thymidylate kinase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 213 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 9/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62 FI EG+EGAGKTT + L+++ D+ TREPGGTP AE R ++ ++ Sbjct: 4 KFIVIEGLEGAGKTTARDTVVDVLRQQGIQDIVFTREPGGTPLAEKLRDLVKQGVENEKL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ V+NVI+PAL G ++ DR SS AYQG + SL++ Sbjct: 64 TDKAEVLMLYAARVQLVDNVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDSRLMQSLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LDLP IGL+R ++R LD E++ + E+ R +L++A Sbjct: 124 TVLGDFKPDLTLYLDLPPAIGLERARSR------GALDRIEKESLAFFERTRTRYLELAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 VD++ + V I + +++ Sbjct: 178 QDAS-IITVDASQTLPEVTAAIRLALESWFKQQ 209 >gi|313680451|ref|YP_004058190.1| thymidylate kinase [Oceanithermus profundus DSM 14977] gi|313153166|gb|ADR37017.1| thymidylate kinase [Oceanithermus profundus DSM 14977] Length = 209 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 10/204 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FISFEG EG+GK+T + L L+ + +T EPGGT R LL G Sbjct: 6 RFISFEGPEGSGKSTQAARLAARLRARGVSTVLTHEPGGTELGREVRRWLLHQGA-AMSP 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE ++++A R +HV V+ PAL G ++CDRF+DSSYAYQG +L S+ + Sbjct: 65 EAEFLLYSADRAEHVRTVLEPALAAGSFVICDRFVDSSYAYQGYGRGLDLAWLRSVSDGI 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ V P T +LDLP + GL R+ R D E + + H + R+ + +A+++ Sbjct: 125 LRGVRPSLTFLLDLPPERGLARLAGR---------DRLEGESLTFHRRVREGYRSLAQSE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 P+R ++D+ + I V Sbjct: 176 PERFVVLDAELPEDELEARIAREV 199 >gi|242241567|ref|ZP_04796012.1| dTMP kinase [Staphylococcus epidermidis W23144] gi|242234948|gb|EES37259.1| dTMP kinase [Staphylococcus epidermidis W23144] Length = 203 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 114/208 (54%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ I + L ++ YD+ TREPGG +E R ++L + Sbjct: 4 FITFEGPEGAGKTSVIKEVSERLAKE-YDIVTTREPGGVLTSEEIRRIVLDG--ESIDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ I P+L GKI+LCDR++DSS AYQG + L E ++ Sbjct: 61 TEAMLFAASRREHLVEKIIPSLQAGKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ +IG +R+ L+ + + +++D + HEK + + + + P Sbjct: 121 NGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISDNP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 R V++ HS V + + ++ Sbjct: 176 HRFIKVNANHSLDKVVEETYQSIIKCLK 203 >gi|119384876|ref|YP_915932.1| dTMP kinase [Paracoccus denitrificans PD1222] gi|119374643|gb|ABL70236.1| thymidylate kinase [Paracoccus denitrificans PD1222] Length = 199 Score = 231 bits (591), Expect = 4e-59, Method: Composition-based stats. Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 6/195 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEGI+G+GK+T L + L + +V +TREPGG+ AE R +L+ + + Sbjct: 1 MFISFEGIDGSGKSTQARRLVQALTAQGTEVLLTREPGGSEGAEEIRRLLVEGCGERWSP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++F AAR DHVE +I+PAL G ++ DRF DSS YQG + ++ L ++ Sbjct: 61 ETELLLFTAARRDHVERLIQPALARGAWVVTDRFADSSRVYQGLARAELRQLVEELHRLT 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD T I+D+ + L R Q R + D FE + K R+ FL +A Sbjct: 121 I-GIEPDRTFIIDIDPAVALARGQARGGVE-----DRFETLGLGFQRKLREGFLALAAEA 174 Query: 185 PDRCHIVDSAHSFQS 199 P R ++D S Sbjct: 175 PGRIRVIDGNGSEDE 189 >gi|157412486|ref|YP_001483352.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9215] gi|166987706|sp|A8G2D5|KTHY_PROM2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157387061|gb|ABV49766.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9215] Length = 212 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSC 57 G FI EGI+G GKTT I L ++L +K + TREPGG+ + R ++L Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPSSGLIKKGSKLITTREPGGSHLGKRLRGLILDN 61 Query: 58 G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ AE ++++A R +HV +I PAL ++ DRF DS+ AYQG + Sbjct: 62 NQNNKPSPLAELLLYSADRAEHVYKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +++ I Q PD T L++ + + R R++ D E + + EK + Sbjct: 122 IKNIESIVCQGESPDLTFFLEISPEESIFR-------RKNQIPDRIESEGIEFLEKVNKG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 F IA+ ++ ++ + ++++ I V Sbjct: 175 FKIIAKE--KNWTVISASQNIKTISNQIKETV 204 >gi|89053768|ref|YP_509219.1| thymidylate kinase [Jannaschia sp. CCS1] gi|122499181|sp|Q28SW8|KTHY_JANSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|88863317|gb|ABD54194.1| thymidylate kinase [Jannaschia sp. CCS1] Length = 208 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 118/210 (56%), Gaps = 6/210 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFIS EGI+G+GK+T + L +L+ + D TREPGG+ AE R +L+ D + A Sbjct: 4 LFISLEGIDGSGKSTQTARLVDWLRVRGRDPLQTREPGGSEGAEEIRRLLVEGDPDRWSA 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E ++F AAR DH+E IRPAL G+ ++ DRF DS+ YQG + +D + + Sbjct: 64 ETEILLFTAARRDHLERTIRPALASGRDVVTDRFADSTRVYQGATRGALRGLVDRIHAEA 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ PD T+ILD+ ++ L R R S D FE + +K R F +AR Sbjct: 124 IEA-EPDLTLILDMDPELALSRGLARDS-----GEDRFEDFGLPFQQKLRAGFQALAREY 177 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 PDRCHIVD++ ++A I IV + + + Sbjct: 178 PDRCHIVDASADPDAIAHTIQTIVGQRLAE 207 >gi|262170995|ref|ZP_06038673.1| thymidylate kinase [Vibrio mimicus MB-451] gi|261892071|gb|EEY38057.1| thymidylate kinase [Vibrio mimicus MB-451] Length = 212 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58 MN+ FI EG+EGAGK+T I ++ L + D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + + ++D+A S + V+ +I + + + Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTALEHWLSR 208 >gi|299529315|ref|ZP_07042754.1| thymidylate kinase [Comamonas testosteroni S44] gi|298722693|gb|EFI63611.1| thymidylate kinase [Comamonas testosteroni S44] Length = 229 Score = 231 bits (591), Expect = 5e-59, Method: Composition-based stats. Identities = 71/218 (32%), Positives = 108/218 (49%), Gaps = 21/218 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFISFEGI+GAGK++HI L + + + V +TREPGGT AE R ++L D Sbjct: 7 KGLFISFEGIDGAGKSSHIEALAQAFRDQGRVVTLTREPGGTSLAEKLRALMLH---DAM 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++ AAR DH+ VI PAL G++++ DRF D+++AYQG L +L+ Sbjct: 64 DPLTEALIAFAARRDHLVQVIEPALARGEVVISDRFTDATFAYQGAGRGFSWEQLSALER 123 Query: 123 ISVQEV------------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++ PD T+ DLP ++ +R+ + D FE + Sbjct: 124 MAQTGTALHAGPDSDFMREPDMTLWFDLPAEVAAERLAT------ARVPDRFEAQPGEFF 177 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + + AR P R +D+ S +V I V Sbjct: 178 ARVAKGYAERARTAPGRFVRIDAHASRHAVWQQITQAV 215 >gi|242239032|ref|YP_002987213.1| thymidylate kinase [Dickeya dadantii Ech703] gi|242131089|gb|ACS85391.1| thymidylate kinase [Dickeya dadantii Ech703] Length = 217 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 112/214 (52%), Gaps = 10/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKT+ +++ L DV TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTSARTVVVDGLAAFGIRDVVFTREPGGTPVAEKLRELIKQGVD 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG L Sbjct: 60 GEPLTDKAELLMLYAARVQLVENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDARLLS 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++I + + PD T+ LDLP +GL+R + R LD E++ + E+ R + Sbjct: 120 SLRDIVLGDFRPDLTLYLDLPPALGLQRARQR------GELDRIEQESLTFFERTRARYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A + + +D++ + V+ +I + + Sbjct: 174 QLAASD-NSIVTIDASRAIDQVSMSIHQALGNWL 206 >gi|260773142|ref|ZP_05882058.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14] gi|260612281|gb|EEX37484.1| thymidylate kinase [Vibrio metschnikovii CIP 69.14] Length = 211 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 113/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58 MN+ FI EG+EGAGK+T I ++ LQ + TREPGGT AE R ++ Sbjct: 1 MNA-KFIVVEGLEGAGKSTAIQVVIDTLQAFGIESITQTREPGGTVLAEKMRALVKEDHP 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GEVLQDVTEVLLMYAARVQLVENVIKPALAAGCWVVGDRHDMSSQAYQGGGRQISPATMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+++++ PD T+ LD+ +GL+R + R LD ER D+ E+ RQ +L Sbjct: 120 QLKQLALGAFSPDFTLYLDIDPRVGLERARGR------GELDRIERMDLSFFERTRQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A++ P I+++ + Q+V +I + + + Sbjct: 174 ELAKDNPS-VTIINAQQTLQAVTQDIQQALLNWLNQH 209 >gi|269836979|ref|YP_003319207.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745] gi|269786242|gb|ACZ38385.1| thymidylate kinase [Sphaerobacter thermophilus DSM 20745] Length = 212 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 82/229 (35%), Positives = 116/229 (50%), Gaps = 29/229 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG EGAGK+T I L L+ + Y V TREPGGT EA R +LL+ Sbjct: 3 LFVTFEGPEGAGKSTQIRRLASELEARGYSVVATREPGGTAIGEAIRQILLAPEHSAMLP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E EA++ AAR HV VI+PAL GKI+LCDRF+DS+ YQG L +LQ + Sbjct: 63 ETEALLNTAARAQHVAEVIQPALAAGKIVLCDRFVDSTLVYQGAGRGLPTSDLLALQRFA 122 Query: 125 VQE----------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + + V++G R + L F+ + HE+ R Sbjct: 123 TRGLWPDLTLLLDLP----------VEVGQARRRA-----SGEPLSRFDADALGFHERVR 167 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 FL +AR+ P R I+D+A S ++VA +L +V E R+ P ++ Sbjct: 168 TGFLALARDDPARWRIIDAAQSEEAVAREVLAVVLE----RLPPAPGRQ 212 >gi|327393492|dbj|BAK10914.1| thymidylate kinase Tmk [Pantoea ananatis AJ13355] Length = 211 Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 9/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEF 62 FI EG+EGAGKTT + L+ D + TREPGGTP AE R ++ ++ Sbjct: 4 KFIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLRVLVKQGIEGEQV 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 TDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ + GL+R + R LD E++ + E+ R+ +L +A Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D +D+ + V + + + + ++ Sbjct: 178 AD-DSILTIDATQPLEQVTSALHATLTAWLAEQ 209 >gi|149191871|ref|ZP_01870106.1| thymidylate kinase [Vibrio shilonii AK1] gi|148834306|gb|EDL51308.1| thymidylate kinase [Vibrio shilonii AK1] Length = 212 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 114/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M+ FI EG+EGAGK+T IS L+ L D+ TREPGGT AE R ++ Sbjct: 1 MSQAKFIVIEGLEGAGKSTAISTLRAELDAAGIQDIVNTREPGGTVLAEKMRALVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ A+R+ VE VI+PAL +G ++ DR SS AYQG + Sbjct: 61 GEPLQDRAELLLMYASRIQLVETVIKPALAKGAWVIGDRHDMSSQAYQGGGREIDQAVMT 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL+ I++ E PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 121 SLKHIAIGEFKPDFTLYLDIDPRLGLERARGR------GELDRIEKMDISFFERTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A N + I+D++ + V +I V + K+ Sbjct: 175 EMANND-ESVAIIDASQKIEDVQHSIQQAVRTWLAKQ 210 >gi|256545293|ref|ZP_05472657.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170] gi|256398974|gb|EEU12587.1| dTMP kinase [Anaerococcus vaginalis ATCC 51170] Length = 209 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 109/215 (50%), Gaps = 7/215 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GL I FEG +G+GKTT + + L YD++ REPGGT +E R ++L Sbjct: 1 MN-GLLIVFEGPDGSGKTTVLEKVYNKLLEDGYDIYKFREPGGTDISEKIREIILDNENI 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E EA+++AA+R V +RP L +G I+LCDRF+ SS YQG + ++ Sbjct: 60 EMNPRCEALLYAASRAQLVGEKLRPLLEKGSIILCDRFVLSSMLYQGIGRGLGVDEVKNI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ E+ D T+ L++ + R + + D E +D H+K ++++ Sbjct: 120 NDFAIGEIRADLTLFLNIDYKTAIDRKRKNFIS------DRLENEDDSFHKKTYDGYIEL 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ D +D+ S +V N L + ++++ Sbjct: 174 SKRFKDEIISIDANKSIDTVVDNCLATIKTYLKEK 208 >gi|197334909|ref|YP_002156557.1| thymidylate kinase [Vibrio fischeri MJ11] gi|238690296|sp|B5FG34|KTHY_VIBFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|197316399|gb|ACH65846.1| thymidylate kinase [Vibrio fischeri MJ11] Length = 210 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 104/210 (49%), Gaps = 9/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE-F 62 FI EG+EGAGK+T I + L + TREPGGTP AE R ++ DE Sbjct: 3 KFIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR V NVI+PAL +G+ ++ DR SS AYQG + +++ Sbjct: 63 TDMAELLLLYAARAQLVGNVIKPALAKGEWVVGDRHDLSSQAYQGGGRGFDRDLMMTMRN 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI +D+ +GL+R R LD E+ + E+ R+ +L+ A Sbjct: 123 TVLGDFKPDLTIYMDIDPKLGLQRASAR------GELDRIEQMKLDFFERSRERYLEFAN 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + +D+ ++V +I+ + + Sbjct: 177 SD-ESIITIDAGQDLETVTQSIITALEAWL 205 >gi|254172680|ref|ZP_04879355.1| thymidylate kinase [Thermococcus sp. AM4] gi|214033609|gb|EEB74436.1| thymidylate kinase [Thermococcus sp. AM4] Length = 227 Score = 231 bits (590), Expect = 6e-59, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 121/215 (56%), Gaps = 18/215 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+F+ EGI+GAGK+T LL ++ +RK Y+V +T+EP T + R ++L+ G + Sbjct: 21 GIFVVIEGIDGAGKSTQAKLLAKWFERKGYEVVLTKEPTDTAFGKLIRKLVLTGGREGII 80 Query: 61 ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 EAEA++FAA R +HV +IRPAL GK+++ DR+ SS AYQ R L L Sbjct: 81 DGARISHEAEALLFAADRAEHVHKLIRPALESGKVVISDRYFYSSLAYQWARG----LDL 136 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L +++ V PD ++LDLPV ++R+ R E + + + +K R+ + Sbjct: 137 QWLIDLNRFAVRPDLVVLLDLPVKESMRRINGRSIKTEFDKI-------LELQKKVRENY 189 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L +A P+ IV++ +S + + +I+ +V + + Sbjct: 190 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLVEQEI 223 >gi|258621219|ref|ZP_05716253.1| thymidylate kinase [Vibrio mimicus VM573] gi|258586607|gb|EEW11322.1| thymidylate kinase [Vibrio mimicus VM573] Length = 212 Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ L + + TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGINQITRTREPGGTVLAEKLRALVKEEHP 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + + ++D+A S + V+ +I ++ + + Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTVLEHWLSR 208 >gi|325283899|ref|YP_004256440.1| Thymidylate kinase [Deinococcus proteolyticus MRP] gi|324315708|gb|ADY26823.1| Thymidylate kinase [Deinococcus proteolyticus MRP] Length = 211 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 111/211 (52%), Gaps = 9/211 (4%) Query: 1 MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M++G FI+FEG EGAGK+T ++ L L+ +T+EPGGT A + R LL Sbjct: 1 MSAGTLPFITFEGGEGAGKSTQLARLAARLEAAGVPHLLTKEPGGTAAGDQIRATLLDPA 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +D AE ++++A+R V V++PAL G++++CDR+ DS+ AYQG FL Sbjct: 61 LD-IDPLAEFLLYSASRAQLVREVLQPALERGELVVCDRYADSTLAYQGYGRGLPLPFLQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ + + P T++LDL +GL RV R D ER D+ H + R FL Sbjct: 120 AVTAEATGGLTPALTVLLDLDPAVGLARVAQR------GQADRLERADLDFHRRLRAGFL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +A QP R ++D+ S + I V Sbjct: 174 ALAEQQPQRWLVLDAGRSADELEEAIWARVQ 204 >gi|123967684|ref|YP_001008542.1| thymidylate kinase [Prochlorococcus marinus str. AS9601] gi|166223102|sp|A2BNS4|KTHY_PROMS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123197794|gb|ABM69435.1| Thymidylate kinase [Prochlorococcus marinus str. AS9601] Length = 212 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSC 57 G FI EGI+G GKTT I L ++L +K + TREPGG+ + R ++L Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPNSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61 Query: 58 G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ + AE ++++A R +HV +I PAL ++ DRF DS+ AYQG + Sbjct: 62 NKNNKPSSLAELLLYSADRAEHVSKIISPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +++ I Q PD T L++ + + R R++ D E + + EK + Sbjct: 122 IKNIESIVCQGASPDLTFFLEISPEESIFR-------RKNEIPDRIESEGIRFLEKVNEG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 F IA+ ++ ++ + Q+++ I + Sbjct: 175 FKLIAKQ--KNWKVISASQNIQTISNQIKETL 204 >gi|307131529|ref|YP_003883545.1| thymidylate kinase [Dickeya dadantii 3937] gi|306529058|gb|ADM98988.1| thymidylate kinase [Dickeya dadantii 3937] Length = 217 Score = 231 bits (589), Expect = 7e-59, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 113/216 (52%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKT+ +++ L+ D + TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTSAHAVVVETLRTFGIDDIVFTREPGGTPLAEKLRELIKQGVA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VENVIRPAL G ++ DR SS AYQG + Sbjct: 60 DEKLTDKAELLMLYAARVQLVENVIRPALARGAWVVGDRHDLSSQAYQGGGRGIDEQLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LD+P ++GLKR + R LD E + + E+ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDIPPELGLKRARQR------GALDRIELESLAFFERTRARYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A +D++ V +I ++ + +++ Sbjct: 174 QLAAADAS-IMTIDASRELAQVNADIRQVLSDWLRQ 208 >gi|323499364|ref|ZP_08104340.1| thymidylate kinase [Vibrio sinaloensis DSM 21326] gi|323315549|gb|EGA68584.1| thymidylate kinase [Vibrio sinaloensis DSM 21326] Length = 210 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 112/217 (51%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M+ FI EG+EGAGK+T I + L + + TREPGGT AE R ++ Sbjct: 1 MSQAKFIVIEGLEGAGKSTAIKAVLDTLNLAGVESIKNTREPGGTVLAETLRTLVKQEHE 60 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E ++ AAR+ VENVI+PAL +G+ ++ DR SS AYQG + Sbjct: 61 GEVLQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIAKETMS 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ PD T+ LD+ +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 ALKQTTLGSFKPDLTLYLDIDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A D I+++ + VA +I + ++K+ Sbjct: 175 ELANGD-DSVLIINAEQPIEKVAADIKTTLTHWLEKQ 210 >gi|317120927|ref|YP_004100930.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885] gi|315590907|gb|ADU50203.1| thymidylate kinase [Thermaerobacter marianensis DSM 12885] Length = 238 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 110/210 (52%), Gaps = 9/210 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FIS EG EG+GK+T +++ +L+ + + REPGGTP E R +LL+ Sbjct: 25 RRGWFISLEGGEGSGKSTQAAVVMDWLRSRGMPCRLVREPGGTPLGERLRELLLNGTGRP 84 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++FAAAR VE VI P+L+ G+ ++CDR++DSS AYQG + S Sbjct: 85 V-PVAEMLLFAAARAQLVETVILPSLLAGETVVCDRYVDSSLAYQGSGLGLGWEAVWSAN 143 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + +MPD T++ D P + L R ++R D ER+ H + R+ + +A Sbjct: 144 RWATRGIMPDLTLLFDCPPE--LARARHR------RPGDDIERRGQGFHRRVREGYRALA 195 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R +R ++D++ VA + ++ Sbjct: 196 RAHGNRVVVIDASRPALEVAAEVRRVLERW 225 >gi|146295779|ref|YP_001179550.1| dTMP kinase [Caldicellulosiruptor saccharolyticus DSM 8903] gi|259494264|sp|A4XHH4|KTHY_CALS8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|145409355|gb|ABP66359.1| thymidylate kinase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 206 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 115/213 (53%), Gaps = 8/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG +G+GK+T I ++++L+ K Y V TREPGGT R +LL + Sbjct: 2 KGKFIVFEGNDGSGKSTQILKVEKYLKEKGYKVVTTREPGGTEVGFRIRKLLLDPAY-KM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++ AA R +HV+NV+ PAL +G +++CDR++ SS YQG + L Sbjct: 61 DGLTEALLLAADRNEHVKNVLIPALEDGYVVVCDRYILSSIVYQGIVRGVGVENIIKLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I +++ PD IIL L +I L+R++ + D + ++ H K F ++++ Sbjct: 121 IFEEKIKPDLYIILTLSPEIALQRLK------MAGKNDKLDTENFDFHRKVYNGFKEVSK 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +C +++ + + V + ++ +L++KR Sbjct: 175 MFK-KCVNIEAEGTVEDVFEKVRKVIDDLLKKR 206 >gi|262166120|ref|ZP_06033857.1| thymidylate kinase [Vibrio mimicus VM223] gi|262025836|gb|EEY44504.1| thymidylate kinase [Vibrio mimicus VM223] Length = 212 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 115/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58 MN+ FI EG+EGAGK+T I ++ L + + TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTALAEKLRALVKEDHP 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIASSTMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ DV E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDVSFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + + ++D+A S + V+ +I + + + Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTALEHWLSR 208 >gi|212223342|ref|YP_002306578.1| thymidylate kinase [Thermococcus onnurineus NA1] gi|229621846|sp|B6YSZ4|KTHY_THEON RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|212008299|gb|ACJ15681.1| thymidylate kinase [Thermococcus onnurineus NA1] Length = 205 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 119/217 (54%), Gaps = 18/217 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 +FI EGI+GAGK+T LL + ++K YDV +T+EP T + R ++L+ G + Sbjct: 1 MFIVIEGIDGAGKSTQARLLAEWFKKKGYDVVLTKEPTDTAFGKLIRRLVLTGGKEGIID 60 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 EAEA++FAA R +HV +I+P+L GKI++ DR+ SS AYQ R L L+ Sbjct: 61 GARISHEAEALLFAADRAEHVHKLIKPSLKTGKIVISDRYFYSSLAYQWARG----LDLE 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L +++ V PD I+LDLPV +KR+ R E + + +K R+ +L Sbjct: 117 WLIDLNRFAVRPDLVILLDLPVKESMKRINGRSIKTEFDKI-------AELQKKVRENYL 169 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A P+ IV++ S + + +I+ +V + KR Sbjct: 170 KLAERFPE-MRIVNALASVEDIHNDIVALVEHELLKR 205 >gi|28898823|ref|NP_798428.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633] gi|260879164|ref|ZP_05891519.1| dTMP kinase [Vibrio parahaemolyticus AN-5034] gi|31340183|sp|Q87N26|KTHY_VIBPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28807042|dbj|BAC60312.1| thymidylate kinase [Vibrio parahaemolyticus RIMD 2210633] gi|308093561|gb|EFO43256.1| dTMP kinase [Vibrio parahaemolyticus AN-5034] Length = 210 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 116/217 (53%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGK+T I + L++ + + TREPGGTP AE R ++ Sbjct: 1 MMKANFIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 61 GEELKDMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMK 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L Sbjct: 121 NLRDTTLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IA P ++++ S + V+ +I + + E + ++ Sbjct: 175 EIANADPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 210 >gi|149926477|ref|ZP_01914738.1| Thymidylate kinase [Limnobacter sp. MED105] gi|149824840|gb|EDM84054.1| Thymidylate kinase [Limnobacter sp. MED105] Length = 229 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 109/216 (50%), Gaps = 8/216 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G ISFEG++GAGK++HI+ +K L+ ++ TREPGGTP EA R ++L + Sbjct: 18 KQGYLISFEGVDGAGKSSHIARVKARLEELGFECLQTREPGGTPVGEAIRELVLH---HD 74 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++ AAR H+ I+PAL G ++ DRF DSS+AYQ + L Sbjct: 75 MDVNTELLLMYAARRQHMVETIQPALDRGVWVITDRFEDSSFAYQAGAGGASWEDCQQLS 134 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +++ P T + DLP+ I R+Q R + D FE K E R F+ + Sbjct: 135 KWALKGFEPTLTFLFDLPIAISQSRIQGR-----AGASDKFEEKPTGYFEAVRAGFIKRS 189 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + P R ++D+ S V +L + + ++ ++ Sbjct: 190 QLNPRRIRLIDAQPSESEVGETVLAELDKFMRTHLN 225 >gi|227499766|ref|ZP_03929866.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098] gi|227218152|gb|EEI83418.1| possible dTMP kinase [Anaerococcus tetradius ATCC 35098] Length = 209 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 6/212 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG +G+GKTT +S +K+ L++ + REPGGT +E R +++ Sbjct: 3 GKLIVFEGPDGSGKTTVLSEVKKRLEKDKIEFLDYREPGGTYISEKIRDIIIDKDNIAMT 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A E ++FAA+R VE I+PAL G ++LCDRF+ SS YQG + + + Sbjct: 63 ASCECLLFAASRAQLVEEKIKPALESGMLVLCDRFVLSSLLYQGVGRGLGIDKVKEINDF 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + D TI D+ L R RE+ D E +D H+K +LDIA Sbjct: 123 ATAGLRADLTIFFDIDYKTALIRK------RENFSADRLESEDFDFHKKIFNAYLDIAER 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +D++ S V ++ +++E ++++ Sbjct: 177 YKKEIKKIDASKSVTEVTDQVMKLIYESLEEK 208 >gi|171058561|ref|YP_001790910.1| dTMP kinase [Leptothrix cholodnii SP-6] gi|170776006|gb|ACB34145.1| dTMP kinase [Leptothrix cholodnii SP-6] Length = 226 Score = 231 bits (589), Expect = 8e-59, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 103/207 (49%), Gaps = 9/207 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F++ EGI+GAGKT+H+ + + + +V TREPGGTP AEA R ++L Sbjct: 25 AGCFVTIEGIDGAGKTSHVQAIAERWRARGLEVVRTREPGGTPLAEALRELVLHQ---PM 81 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA++ AAR +H++ VI PAL G ++LCDRF D+++AYQG L L+ Sbjct: 82 DALTEALLVFAARRNHLQEVIEPALARGAVVLCDRFTDATFAYQGGGRGFDTAVLAQLET 141 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD T+ DL ++ + D FER+ V R + D Sbjct: 142 WVQGSRQPDLTLWFDLGPEL------AAERRAAARAPDRFEREQVAFFHAVRLAYADRLA 195 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 P R +D+ + + VA L ++ Sbjct: 196 QAPQRVQRIDAGGTPEQVAARWLAVLE 222 >gi|27366274|ref|NP_761802.1| thymidylate kinase [Vibrio vulnificus CMCP6] gi|37679464|ref|NP_934073.1| thymidylate kinase [Vibrio vulnificus YJ016] gi|320156783|ref|YP_004189162.1| thymidylate kinase [Vibrio vulnificus MO6-24/O] gi|31340187|sp|Q8D8H5|KTHY_VIBVU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576399|sp|Q7MLZ6|KTHY_VIBVY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|27362475|gb|AAO11329.1| thymidylate kinase [Vibrio vulnificus CMCP6] gi|37198208|dbj|BAC94044.1| thymidylate kinase [Vibrio vulnificus YJ016] gi|319932095|gb|ADV86959.1| thymidylate kinase [Vibrio vulnificus MO6-24/O] Length = 212 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 115/216 (53%), Gaps = 9/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGK+T I + L++ ++ TREPGGTP AE R ++ Sbjct: 1 MKQAKFIVIEGLEGAGKSTAIQTVLDTLRQAGINEIAQTREPGGTPLAEKMRALVKEEHP 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E ++ AAR+ VENVI+PAL EGK ++ DR SS AYQG + Sbjct: 61 GEHLHDMTELLLLYAARVQLVENVIKPALHEGKWVVGDRHDLSSQAYQGGGRQIDATLMK 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ E P T+ +D+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 121 NLRDTALGEFKPAFTLYMDIDPKVGLERARGR------GELDRIEKMDISFFERTRQRYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A++ +++ S + VA +I + + +++ Sbjct: 175 ELAKSDAS-IVTINAEQSIEQVANDIRSALNLWLEQ 209 >gi|114799318|ref|YP_760517.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444] gi|114739492|gb|ABI77617.1| thymidylate kinase [Hyphomonas neptunium ATCC 15444] Length = 219 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61 +G FI+ EG EG GK+T L R L+ V VTREPGGTP AEAAR +LL + Sbjct: 6 AGHFITLEGGEGTGKSTLAKALARKLEAHGIGVVVTREPGGTPLAEAARQLLLHPPEGEA 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +EA++ AAR DH+E +IRPAL G ++CDRF DS+ YQ L S++ Sbjct: 66 WSPLSEALLVNAARRDHLEKLIRPALARGDWVICDRFADSTRVYQSIEGGVDVSALLSIE 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + +P T+ILD+ +D+ KR R + LD FER+ HE R F DIA Sbjct: 126 REVLGDTVPSMTLILDVSLDVASKRRTAR-----AGALDTFERRPKAFHEAVRAAFQDIA 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R++P RC ++D+ + V V L+Q Sbjct: 181 RSEPARCRLIDTDVTPDQVLDAAWKQVATLLQ 212 >gi|312172085|emb|CBX80342.1| Thymidylate kinase [Erwinia amylovora ATCC BAA-2158] Length = 210 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCG- 58 MN G FI EG+EGAGKTT + LQR D+ TREPGGTP AE R ++ Sbjct: 1 MN-GKFIVIEGLEGAGKTTARDAVVGVLQRHGINDIVFTREPGGTPLAEKLRDLIKQGMV 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + AE ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 60 GERVTDRAELLMLYAARVQLVENVIKPALARGAWVIGDRHDLSSQAYQGGGRGMSSELMS 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ + + P T+ LD+ ++GL+R + R LD E++ + + R +L Sbjct: 120 CLKQAVLGDFAPHLTLYLDVTPELGLQRARAR------GELDRIEQESLNFFTRTRDRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A VD+ V + + + +Q++ Sbjct: 174 ALASADSL-IKTVDATQPLAQVTAALQQTLNQWLQEQ 209 >gi|59712342|ref|YP_205118.1| thymidylate kinase [Vibrio fischeri ES114] gi|73920832|sp|Q5E416|KTHY_VIBF1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|59480443|gb|AAW86230.1| thymidylate kinase [Vibrio fischeri ES114] Length = 210 Score = 230 bits (588), Expect = 9e-59, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 9/212 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE-F 62 FI EG+EGAGK+T I + L + TREPGGTP AE R ++ DE Sbjct: 3 KFIVIEGLEGAGKSTAIKNVLATLAKHGITSPVTTREPGGTPLAEKMRELVKQGHPDEPL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR V NVI+PAL G+ ++ DR SS AYQG + +++ Sbjct: 63 TDMAELLLLYAARAQLVGNVIKPALARGEWVVGDRHDLSSQAYQGGGRGFDRELMMTMRN 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI +D+ +GL+R R LD E+ + E+ R+ +L+ A Sbjct: 123 TVLGDFKPDLTIYMDIDPKLGLQRASAR------GELDRIEQMKLDFFERSRERYLEFAN 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +D+ ++V +I+ + + K Sbjct: 177 SD-ESIITIDAGQDLETVTNSIITALEAWLVK 207 >gi|120612065|ref|YP_971743.1| thymidylate kinase [Acidovorax citrulli AAC00-1] gi|166221717|sp|A1TSN1|KTHY_ACIAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|120590529|gb|ABM33969.1| thymidylate kinase [Acidovorax citrulli AAC00-1] Length = 221 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 17/217 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEGI+GAGK++HI + L+R+ V VTREPGGTP AE R +LL+ + Sbjct: 3 RRGWFITFEGIDGAGKSSHIEAVAEALRREGRTVTVTREPGGTPLAETLRSLLLN---EA 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A E++V A R DH+ +VI PAL+ G+++LCDRF D+++AYQG L L+ Sbjct: 60 MDALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLE 119 Query: 122 EISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 I+ + P T+ DL D+ R++ + D FE + V + Sbjct: 120 RITQSGLQEGTDAVLHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRV 173 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 Q + D A P R +D+ ++V ++ I+ Sbjct: 174 AQGYADRAAADPGRFARLDADQPREAVRAQLMEILHR 210 >gi|322833645|ref|YP_004213672.1| thymidylate kinase [Rahnella sp. Y9602] gi|321168846|gb|ADW74545.1| thymidylate kinase [Rahnella sp. Y9602] Length = 216 Score = 230 bits (588), Expect = 1e-58, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 112/218 (51%), Gaps = 10/218 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M S FI EG+EGAGKTT ++ L++ ++ TREPGGTP AE R + Sbjct: 1 MKSN-FIVIEGLEGAGKTTAHDVVVNALRQHGVGEIVFTREPGGTPLAEKLRDLFKRGVD 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VE VI PAL G ++ DR SS AYQG + Sbjct: 60 GEKPTVKAEVLMLYAARVQLVETVILPALARGAWVVGDRHDLSSQAYQGGGRGIDAKLMT 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP IGL+R + R LD E++ + E+ R +L Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPAIGLQRARAR------GELDRIEQEALPFFERTRTRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 ++A R +D++ S + V +I + ++V Sbjct: 174 ELAAGD-SRIKTIDASQSIEQVTASIELTLKNWFDEQV 210 >gi|23465074|ref|NP_695677.1| thymidylate kinase [Bifidobacterium longum NCC2705] gi|23325685|gb|AAN24313.1| thymidylate kinase [Bifidobacterium longum NCC2705] Length = 193 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 68/199 (34%), Positives = 105/199 (52%), Gaps = 11/199 (5%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVDEFGAEAEAIVFA 72 GKTT + L+ +L+ + V VTREPGGT +A R +LL G + AEA++FA Sbjct: 2 GKTTQVERLRAYLEAQGRTVVVTREPGGTALGKAIRQLLLHGVDGGAVDIAPRAEALLFA 61 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 A R HV IRPAL G++++ DR+LDSS AYQ + SL + ++PD Sbjct: 62 ADRAQHVAETIRPALERGEVVITDRYLDSSLAYQAGGRELTPEEIRSLSMWATNNLLPDR 121 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 T +LD+ + R+++ D E + RQ FLD+A +P+R ++D Sbjct: 122 TYLLDMDPALSHHRLEH--------AEDRMESAGDDFQSRTRQAFLDLAAAEPNRFRVID 173 Query: 193 SAHSFQSVATNILNIVWEL 211 ++ S ++V I + + EL Sbjct: 174 ASQSIEAVWAAIESDIKEL 192 >gi|119775178|ref|YP_927918.1| thymidylate kinase [Shewanella amazonensis SB2B] gi|166223115|sp|A1S792|KTHY_SHEAM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|119767678|gb|ABM00249.1| thymidylate kinase [Shewanella amazonensis SB2B] Length = 208 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 110/213 (51%), Gaps = 10/213 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV- 59 N G FI EG+EGAGK++ I+L+ F+++ TREPGGTP AE R ++ + Sbjct: 4 NPGKFIVIEGLEGAGKSSAITLVHDFIEKHTGMAPVCTREPGGTPLAEKIRDLVKNAEPG 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++F AAR V NVI+P+L G+ +L DR SS AYQG + + Sbjct: 64 DPLCDEAECLLFYAARAQLVANVIKPSLASGRWVLGDRHNLSSIAYQGGGRGL-MSLVKT 122 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ PD T+ LD+ +GL+R R LD E++++ + R FL Sbjct: 123 ISDATLGGFKPDLTLYLDIDPLLGLERAARR------GALDRIEQQEIDFFHRARATFLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 AR+ ++D++ V +IL + + Sbjct: 177 QARDDSS-IVVIDASKPLNEVHKDILACLSTAL 208 >gi|261209807|ref|ZP_05924109.1| thymidylate kinase [Vibrio sp. RC341] gi|260841105|gb|EEX67625.1| thymidylate kinase [Vibrio sp. RC341] Length = 212 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 73/214 (34%), Positives = 116/214 (54%), Gaps = 10/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58 MN+ FI EG+EGAGK+T I ++ L + + TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIEQITRTREPGGTVLAEKLRTLVKEDHP 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL +G+ ++ DR SS AYQG + Sbjct: 60 GEELKDITELLLVYAARVQLVENVIKPALAKGQWVVGDRHDMSSQAYQGGGRQIAPSTML 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 120 SLKQTALGNFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++A D ++++A S + VAT+I + + + Sbjct: 174 ELAEED-DSVVLINAAQSVEQVATDIRHALTTWL 206 >gi|90413263|ref|ZP_01221257.1| putative thymidylate kinase [Photobacterium profundum 3TCK] gi|90325664|gb|EAS42127.1| putative thymidylate kinase [Photobacterium profundum 3TCK] Length = 209 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 9/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE-F 62 FI EG+EGAGK+T I + L + TREPGGTP AE R ++ DE Sbjct: 4 KFIVIEGLEGAGKSTAIQQVIDTLAAHGIENPESTREPGGTPLAEQMRALIKDGHPDEPL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR+ V+N+I+PAL EG+ ++ DR SS AYQG +++L++ Sbjct: 64 TDMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI +D+ +GL+R + R LD E+ +V + R FL+++ Sbjct: 124 TVLGDFCPDLTIYMDIDPILGLERARGR------GELDRIEKMNVDFFHRARARFLELSE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 N P + I+D++ S + V +++ + ++K+ Sbjct: 178 NNP-KVIIIDASQSLECVTSDLKQALNHWLEKQ 209 >gi|329120408|ref|ZP_08249074.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200] gi|327462092|gb|EGF08420.1| thymidylate kinase [Neisseria bacilliformis ATCC BAA-1200] Length = 207 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 66/213 (30%), Positives = 110/213 (51%), Gaps = 8/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ FI+ +GI+G+GK+TH++ ++ + + V TREPGGTP E R +LL Sbjct: 1 MHP-RFITLDGIDGSGKSTHLAAMRDWFAARGLPVLFTREPGGTPLGEELRRLLLDPAA- 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + G E ++ AAR H+++VI PAL +G ++ DRF D+++AYQG + +L Sbjct: 59 QVGLRTETLLMFAARQQHLDDVILPALEQGVHVVSDRFTDATFAYQGGGRGLPEADIAAL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T+ILD+P ++ RV + D FE++ + RQ +LD Sbjct: 119 EHWVQRGLRPDLTLILDVPAEVSFARVAK------ARDKDRFEQEQAAFFLRVRQAYLDR 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A P R ++DS V + + + Sbjct: 173 AAADPQRYRVIDSNRDKTEVRAAVETALAACFE 205 >gi|254425294|ref|ZP_05039012.1| thymidylate kinase [Synechococcus sp. PCC 7335] gi|196192783|gb|EDX87747.1| thymidylate kinase [Synechococcus sp. PCC 7335] Length = 237 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 66/243 (27%), Positives = 111/243 (45%), Gaps = 29/243 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF---------LQRKNY--DVHVTREPGGTPAAEAAR 51 G I FEG EG GKTT + L + L K + V +TREPGGT + R Sbjct: 2 RGKLIVFEGGEGCGKTTQLQRLYDWIVQNKSWQLLLSKGHVAGVKMTREPGGTVLGKQLR 61 Query: 52 HVLLS--------CGVDEFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 +LL+ D +AE +++AA R HVE V+ P L G +LCDR++D Sbjct: 62 QLLLNESKLNEPRSANDALTPVTNKAELLLYAADRAQHVEEVLLPWLEAGYWVLCDRYID 121 Query: 101 SSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 S+ AYQG + +L +I+ + D T+ L++P ++GL R++ R D Sbjct: 122 STVAYQGYGRQLDLSLITTLNQIATAGLRGDLTLWLNVPPEVGLDRMRAR------GQAD 175 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 E+ + H++ F +A+ + + VA +I ++ +++ + Sbjct: 176 RIEQASMAFHQRVHDGFAMLAKENATTVSVA-GDRTADEVAMSIQQVLQRRLKQWYPEWA 234 Query: 221 SKK 223 + + Sbjct: 235 TSQ 237 >gi|62185123|ref|YP_219908.1| thymidylate kinase [Chlamydophila abortus S26/3] gi|73920816|sp|Q5L5Y4|KTHY_CHLAB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|62148190|emb|CAH63947.1| thymidylate kinase [Chlamydophila abortus S26/3] Length = 211 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ LLK L + V TREPGG+ E R +L E Sbjct: 1 MFIVIEGCEGSGKSSLTQLLKDKLMAEGKAVVATREPGGSSLGERVRDWILDPSTTELSP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F AAR H+ I PAL GKI++CDRF DS+ YQG ++ +L Sbjct: 61 YTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSV 120 Query: 125 VQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V +++P+ T +LD+P D GLKR Q + S D FE + + H K R+ FL +A Sbjct: 121 VGQKKILPNLTCLLDIPADEGLKRKQQQKSF------DKFENQSLAYHTKIREGFLSLAE 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ D ++D+ + ++ EL Sbjct: 175 SRLDSYLVLDARQPIEESLNKVMTAYTEL 203 >gi|91788382|ref|YP_549334.1| thymidylate kinase [Polaromonas sp. JS666] gi|123164854|sp|Q12AK6|KTHY_POLSJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91697607|gb|ABE44436.1| thymidylate kinase [Polaromonas sp. JS666] Length = 225 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 30/227 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLFISFEGI+GAGK+THI+ L + + V +TREPGGTP AE R ++L+ D Sbjct: 1 MH-GLFISFEGIDGAGKSTHIAGLADAFRAQGRAVTLTREPGGTPLAEKLRDLVLN---D 56 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AAR DH+ VI PAL+ G ++LCDRF D+++AYQG L +L Sbjct: 57 AMDSLTEALLIFAARRDHLVRVIAPALVRGDVVLCDRFTDATFAYQGAGRGFDLAVLATL 116 Query: 121 QEISVQE--------------------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ + + P T+ DLP + R+Q + D Sbjct: 117 EQWVQSDEGLLGDPAGNFPMKPEVETVIEPHLTVWFDLPPEEAALRLQG------ARVPD 170 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 FE + + + + + D + P+R ++++ V + + Sbjct: 171 KFEAQPLEFFRRVAKGYSDRQQGHPERFARINASQPRDVVWQAVRQV 217 >gi|320538798|ref|ZP_08038475.1| thymidylate kinase [Serratia symbiotica str. Tucson] gi|320031143|gb|EFW13145.1| thymidylate kinase [Serratia symbiotica str. Tucson] Length = 212 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 72/217 (33%), Positives = 109/217 (50%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58 M S F+ EG+EGAGKTT + L+ + + TREPGGTP AE R + G Sbjct: 1 MKS-KFVVIEGLEGAGKTTARDTVASVLREHGVNNIVFTREPGGTPLAEKLRDLFKRGVG 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + + Sbjct: 60 NELPTIKAEVLMLYAARVQLVETVIKPALERGAWVVGDRHDLSSQAYQGGGRGTDPQLML 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + PD T+ LDLP IGL+R Q R LD E++ + + R+ +L Sbjct: 120 SLRDAVLGSFRPDLTLYLDLPPLIGLQRAQAR------GELDRIEQEVLPFFTRTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A + +D+ + V +I V +Q++ Sbjct: 174 ALAAQN-ESIVTLDATQPLEQVTASIRACVSRWLQQQ 209 >gi|91793405|ref|YP_563056.1| thymidylate kinase [Shewanella denitrificans OS217] gi|91715407|gb|ABE55333.1| thymidylate kinase [Shewanella denitrificans OS217] Length = 215 Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 10/211 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDE 61 G F+ EG+EGAGK++ ++L+K L ++ TREPGGTP AE R ++ + D Sbjct: 10 GKFVVIEGLEGAGKSSAVALVKALLTSHTGHEPVCTREPGGTPLAERIRDLVKIADPQDP 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EAE ++ AAR + NVI+PAL G+ +L DR SS AYQG +++L Sbjct: 70 LCDEAECLLIYAARAQLIANVIKPALQRGEWVLGDRHNLSSLAYQGGGRGLMP-LVNTLS 128 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +Q PD T+ LD+ +GL R NR LD E++ + E+ R+ +L +A Sbjct: 129 QACLQGFKPDLTLYLDIEPSLGLTRAANR------GALDRIEQQALAFFERARETYLQLA 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++D++ S ++V +I + + Sbjct: 183 SQDSS-ILVIDASQSLEAVHHDIKQALAARL 212 >gi|326316632|ref|YP_004234304.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373468|gb|ADX45737.1| thymidylate kinase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 221 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 113/217 (52%), Gaps = 17/217 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+FEGI+GAGK++HI + L+R V VTREPGGTP AE R +LL+ + Sbjct: 3 RRGWFITFEGIDGAGKSSHIEAVAEALRRGGRTVTVTREPGGTPLAETLRALLLN---EA 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A E++V A R DH+ +VI PAL+ G+++LCDRF D+++AYQG L L+ Sbjct: 60 MDALTESLVVFAGRRDHLRSVIAPALVRGEVVLCDRFTDATFAYQGAGRGFDRAVLAQLE 119 Query: 122 EISVQEVM--------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 I+ + P T+ DL D+ R++ + D FE + V + Sbjct: 120 RITQSGLQEGSDAILHPHLTLWFDLAPDVAAARLEG------ARAPDRFEAQPVEFFRRV 173 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 Q + D A P R +D+ ++V +++I+ Sbjct: 174 AQGYADRAAADPGRFARLDADQPREAVRAQLMDILHR 210 >gi|241764588|ref|ZP_04762604.1| dTMP kinase [Acidovorax delafieldii 2AN] gi|241365951|gb|EER60577.1| dTMP kinase [Acidovorax delafieldii 2AN] Length = 225 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 110/216 (50%), Gaps = 18/216 (8%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GLFI+FEGI+GAGK++HI L + + V VTREPGGTP AE R ++L+ Sbjct: 1 MSRPGLFITFEGIDGAGKSSHIEGLAEAFRAQGRTVTVTREPGGTPLAEKLRAMVLN--- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D A E+++ AAR DH+ VI PAL G ++LCDRF D+++AYQG L Sbjct: 58 DPMDALTESLLIFAARRDHLCQVIEPALARGDVVLCDRFTDATFAYQGAGRGFDLEVLSK 117 Query: 120 LQEISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L+ + + PD T+ DL +I +R+ + D FE + V Sbjct: 118 LELMVQTGLAQEPGFMRNPDLTVWFDLAPEIAAQRLAG------ARVPDRFEAQPVEFFR 171 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + Q + D A P R +D+A V + ++ Sbjct: 172 RVAQGYADRAATAPQRFARLDAALDRHRVWQQLTSV 207 >gi|240103826|ref|YP_002960135.1| thymidylate kinase [Thermococcus gammatolerans EJ3] gi|259494283|sp|C5A1K2|KTHY_THEGJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|239911380|gb|ACS34271.1| Thymidylate kinase (dTMP kinase) (tmk) [Thermococcus gammatolerans EJ3] Length = 208 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 121/215 (56%), Gaps = 18/215 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+F+ EGI+GAGK+T LL ++ ++K Y+V +T+EP T + R ++L+ G + Sbjct: 2 GIFVVIEGIDGAGKSTQAKLLAKWFEKKGYEVILTKEPTDTAFGKLIRKLVLTGGREGII 61 Query: 61 ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 EAEA++FAA R +HV +I+PAL GK+++ DR+ SS AYQ R L L Sbjct: 62 DGARISHEAEALLFAADRAEHVHKLIKPALESGKVVISDRYFYSSLAYQWARG----LDL 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L +++ V PD ++LDLPV ++R+ R E + V + ++ R+ + Sbjct: 118 QWLIDLNRFAVRPDLVVLLDLPVKESMRRINGRSIKTEFDKI-------VELQKRVRENY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L +A P+ IV++ +S + + +I+ +V + + Sbjct: 171 LKLAEMFPE-IRIVNAQNSIEDIHRDIVGLVEQEI 204 >gi|315654563|ref|ZP_07907469.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333] gi|315491027|gb|EFU80646.1| thymidylate kinase [Mobiluncus curtisii ATCC 51333] Length = 239 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 6/211 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF++FEG +G GKTT I+ +++ + +DV TREPGGT A R +LL G + Sbjct: 29 TQGLFVAFEGCDGVGKTTQIARAASWVREQGWDVVETREPGGTDLGVALRQLLLDAG--D 86 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEA++FAA R HV +I PA+ +GK+++ DR+L SS AYQG + L Sbjct: 87 VSPRAEALLFAADRAQHVHKLIIPAINDGKVVITDRYLASSIAYQGHGRELGDREIRDLS 146 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++P+ T++LDL ++ + + D ER + E+ R+ FL ++ Sbjct: 147 LWATGGLVPNLTVLLDLDPEVA---AARQAADASLGSPDRMERAGIEFQERVREDFLRMS 203 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q D +VD++ +A + + +L+ Sbjct: 204 EGQ-DTWLVVDASLPVAEIAAQVRLRLAQLL 233 >gi|269139439|ref|YP_003296140.1| thymidylate kinase [Edwardsiella tarda EIB202] gi|267985100|gb|ACY84929.1| thymidylate kinase [Edwardsiella tarda EIB202] gi|304559335|gb|ADM41999.1| Thymidylate kinase [Edwardsiella tarda FL6-60] Length = 213 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 107/215 (49%), Gaps = 9/215 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEF 62 FI EG+EGAGKTT ++ L+R +V TREPGGTP AE R ++ + Sbjct: 4 KFIVIEGLEGAGKTTARDVVVDELRRHGIQEVVFTREPGGTPLAEHLRTLVKEGVEGETL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR+ +ENVI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 TDRAEVLMLYAARVQLIENVIKPALARGAWVVGDRHDLSSQAYQGGGRGIDTHLMQTLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+P GL R ++R LD ER+ + E+ R +L +A Sbjct: 124 TVLGDFKPDLTLYLDIPPQQGLARARSR------GELDRIERESLAFFERTRDRYLALAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +D+A + V+ I + + + + Sbjct: 178 AD-ATIVTLDAAQPLEQVSAAIRRALRAWLASQEA 211 >gi|258625441|ref|ZP_05720334.1| thymidylate kinase [Vibrio mimicus VM603] gi|258582245|gb|EEW07101.1| thymidylate kinase [Vibrio mimicus VM603] Length = 212 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 114/216 (52%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58 MN+ FI EG+EGAGK+T I ++ L + D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLHQHGIDQITRTREPGGTALAEKLRALVKEDHP 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDITELLLVYAARVQLVENVIKPALADGVWVVGDRHDMSSQAYQGGGRQIAPSTMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ D E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDTSFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + + ++D+A S + V+ +I + + + Sbjct: 174 ELAESD-ESVVLIDAAQSIEQVSKDIRTALEYWLSR 208 >gi|71279228|ref|YP_269022.1| thymidylate kinase [Colwellia psychrerythraea 34H] gi|123632593|sp|Q482J5|KTHY_COLP3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71144968|gb|AAZ25441.1| thymidylate kinase [Colwellia psychrerythraea 34H] Length = 212 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 109/213 (51%), Gaps = 8/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 M++G FI EG+EGAGK++ I++++ L + + TREPGGTP AE+ R ++ S Sbjct: 1 MSTGKFIVIEGMEGAGKSSAIAVIESTLNKHGIEYINTREPGGTPLAESLRDMVKSVDHQ 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ E E ++ A+R + N I PAL GK ++ DR SS AYQG +++ Sbjct: 61 EKLTVETELLLMYASRSQLLANKILPALAAGKWVIGDRHDLSSRAYQGGGRGFDETIMNT 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +I+++ PD T+ LD+ IGL R + R LD E + + + + + Sbjct: 121 ISDITLKGFRPDITLYLDIDPHIGLSRAKARGD------LDRIELEKMEFFIRVHNKYRE 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A D VD+A + V ++ V + Sbjct: 175 LAEQD-DSIITVDAAQAMLKVHQDVEKAVIGFI 206 >gi|269967358|ref|ZP_06181419.1| thymidylate kinase [Vibrio alginolyticus 40B] gi|269828066|gb|EEZ82339.1| thymidylate kinase [Vibrio alginolyticus 40B] Length = 210 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 69/217 (31%), Positives = 115/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGK+T I + L+ D+ TREPGGTP AE R ++ Sbjct: 1 MMKANFIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 61 GEELKDMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMK 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 121 NLRDTTLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IA P I+++ + + V+ +I + + E + ++ Sbjct: 175 EIAHADPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 210 >gi|148241353|ref|YP_001226510.1| thymidylate kinase [Synechococcus sp. RCC307] gi|166223123|sp|A5GQJ8|KTHY_SYNR3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147849663|emb|CAK27157.1| Thymidylate kinase [Synechococcus sp. RCC307] Length = 212 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 G F+ EGI+G GKTT + L +L + TREPGGT +A R +LL Sbjct: 2 RGRFLVLEGIDGCGKTTQLKALADWLPASGLMPSGAQLITTREPGGTALGQALRQLLLHP 61 Query: 58 GVDEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ A AE +++AA R HV+ + PAL G +L DR+ S+ AYQG Sbjct: 62 PEEQAPATRAELLLYAADRAQHVQTRLEPALAAGDWVLSDRYCGSTAAYQGYGRGLDLDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L++++ + PD + L+L ++ +R R D E + + + Q Sbjct: 122 ITQLEQLATAGLQPDLCLWLELSPELAAQR-------RSGQQQDRIEAEGLAFLARVHQG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 F ++++ P VD++ + V + ++V E ++ Sbjct: 175 FAELSQR-PL-WRRVDASLPPEQVHQQVQHLVREGLE 209 >gi|194336672|ref|YP_002018466.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1] gi|238693358|sp|B4SAG3|KTHY_PELPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|194309149|gb|ACF43849.1| dTMP kinase [Pelodictyon phaeoclathratiforme BU-1] Length = 217 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 112/218 (51%), Gaps = 4/218 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L L + + V REPGGT AE R +LL Sbjct: 1 MLITFEGIDGAGKSTQIKELVHALGLQGIEAVVLREPGGTTVAEKIRQILLESSHG-ITP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V+ VIRPAL GK ++ DRF DS+ AYQG L S+ IS Sbjct: 60 VGELLLFSASRAELVQEVIRPALASGKTIILDRFFDSTTAYQGYGRGIDMELLRSIIAIS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LDL + LKR ++ S+ E LD ER + + R+ +LDI Sbjct: 120 TCGITPDITFYLDLEPEEALKRKYSKTSIPLAFEGEELDRMERSGLEFYRNVRRGYLDIK 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + + R +++ + IL ++ E ++P+ Sbjct: 180 QLENRRFVQLNALDPVAVIHGKILALLGERFPSFLNPV 217 >gi|307292799|ref|ZP_07572645.1| thymidylate kinase [Sphingobium chlorophenolicum L-1] gi|306880865|gb|EFN12081.1| thymidylate kinase [Sphingobium chlorophenolicum L-1] Length = 208 Score = 229 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 85/203 (41%), Positives = 109/203 (53%), Gaps = 5/203 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FIS EG EGAGK+T I L L+++ +V TREPGG+ AEA R +LL+ G D Sbjct: 1 MTQGRFISLEGGEGAGKSTQIRALAAALRQRGLEVVETREPGGSEGAEAIRALLLTGGAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AEA++FAAAR DHVE IRPAL G +L DRFLDSS AYQG D S L +L Sbjct: 61 RWSPRAEALLFAAARADHVERTIRPALDRGAWVLSDRFLDSSRAYQGMGDLSDADIL-AL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I +PD T+ L LP R ++R + D +D H+ + F Sbjct: 120 HRIGSGGFLPDRTLFLTLPEAEATARARSR----DGDASDRIGGRDPAFHQAVARAFTRF 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATN 203 A +P R VD+A +V Sbjct: 176 AEQEPGRFLTVDAAGDSAAVTER 198 >gi|14591458|ref|NP_143538.1| thymidylate kinase [Pyrococcus horikoshii OT3] gi|6016461|sp|O59366|KTHY_PYRHO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|3258125|dbj|BAA30808.1| 205aa long hypothetical thymidylate kinase [Pyrococcus horikoshii OT3] Length = 205 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 120/214 (56%), Gaps = 16/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 G FI EGI+G+GKTT LL + + K Y+V +T+EP + + R ++L Sbjct: 2 RGYFIVLEGIDGSGKTTQAKLLAEWFEDKGYEVLLTKEPTDSELGKLIRRIILEESVIDG 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EAEA++FAA R +HV+ +I PAL EGK+++CDR+ SS AYQ R L L+ Sbjct: 62 SKISYEAEALLFAADRAEHVKKIILPALSEGKVVICDRYFYSSLAYQWARG----LDLNW 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L +++ PD I+LDLPV L+R++ R +L E + V + K R +L Sbjct: 118 LIQVNSFAPRPDLAILLDLPVKESLRRIKLRGTLTEFDKI-------VELQRKVRHNYLK 170 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW-ELV 212 +A P+ IV++ S + + ++I+ +V EL+ Sbjct: 171 LAEMFPE-MRIVNALSSIEDIHSDIVALVKHELL 203 >gi|328474618|gb|EGF45423.1| thymidylate kinase [Vibrio parahaemolyticus 10329] Length = 209 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 FI EG+EGAGK+T I + L++ + + TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPCIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P ++++ S + V+ +I + + E + ++ Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209 >gi|229514876|ref|ZP_04404337.1| thymidylate kinase [Vibrio cholerae TMA 21] gi|229348856|gb|EEO13814.1| thymidylate kinase [Vibrio cholerae TMA 21] Length = 212 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG+EGAGK+T I ++ L++ D TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVVVETLKQNGIDHITRTREPGGTLLAEKLRALVKEEHP 59 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 60 GEELQDITELLLVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTALGDFKPDLTLYLDIDPKLGLERARGR------GELDRIEKMDISFFERARERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ + D ++D+A S + V +I + + + + Sbjct: 174 ELTNSD-DSVVMIDAAQSIEQVTAHIRRALQDWLSQ 208 >gi|308186414|ref|YP_003930545.1| Thymidylate kinase [Pantoea vagans C9-1] gi|308056924|gb|ADO09096.1| Thymidylate kinase [Pantoea vagans C9-1] Length = 210 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MNS FI EG+EGAGKTT + L + D+ TREPGGTP AE R ++ Sbjct: 1 MNS-KFIVIEGLEGAGKTTARDAIVATLHARGISDLVFTREPGGTPLAEQLRVLVKQGIE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 60 GEQVTDKAELLMLYAARVQLVETVIKPALARGAWVIGDRHDLSSQAYQGGGRGLDSGLMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ + + PD T+ LD+ +IGL+R + R LD E++ + E+ R +L Sbjct: 120 TLRDAVLGDFRPDLTLYLDVTPEIGLQRARAR------GELDRIEQESLRFFERTRARYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A P +D+ S V ++ + + ++ Sbjct: 174 TLAAEDP-TILTIDATQSLTEVTASLQVALASWLAEQ 209 >gi|241895200|ref|ZP_04782496.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313] gi|241871506|gb|EER75257.1| thymidylate kinase [Weissella paramesenteroides ATCC 33313] Length = 214 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 7/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGG--TPAAEAARHVLLSCGV 59 SG FI+FEG +GAGKT+ + + L + +TREPGG + AEA R V+L + Sbjct: 2 SGTFITFEGPDGAGKTSVLRAIVERLAPLLGDKLVLTREPGGKDSQVAEAIRDVVLDPNL 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A EA+++AA+R H+ + + PAL K+++ DR++DSS AYQG + Sbjct: 62 PSMDAWTEALLYAASRRQHLVDTVLPALAADKVVVSDRYVDSSIAYQGGGRRLGIEAVTE 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + + + +MP TI LD+ ++GL+R+Q ++ + + + H++ + Sbjct: 122 INQFATKGIMPTATIYLDIRPEVGLQRIQEN----RQDEINRLDVEKLSFHQRVTDAYHQ 177 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A P+R I+++ V T+ + ++ Sbjct: 178 LATQYPERFLIINAEQDLADVITDTWTALMPIL 210 >gi|270261351|ref|ZP_06189624.1| thymidylate kinase [Serratia odorifera 4Rx13] gi|270044835|gb|EFA17926.1| thymidylate kinase [Serratia odorifera 4Rx13] Length = 211 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 110/216 (50%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M S F+ EG+EGAGKTT + L+ D+ TREPGGTP AE R + Sbjct: 1 MKS-KFVVIEGLEGAGKTTARDTVVNVLREHGINDIVFTREPGGTPLAEKLRDLFKRGID 59 Query: 60 DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 60 GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP +GL+R + R LD E++ + E+ R +L Sbjct: 120 SLRDTVLGDFRPDLTVYLDLPPLLGLQRARAR------GELDRIEQEALPFFERTRSRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A D VD++ S + V I + + +Q+ Sbjct: 174 ELAAQD-DSIVTVDASQSLEQVTAAIRRCLSQWLQQ 208 >gi|153838848|ref|ZP_01991515.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810] gi|308095583|ref|ZP_05906946.2| dTMP kinase [Vibrio parahaemolyticus Peru-466] gi|308125924|ref|ZP_05778121.2| dTMP kinase [Vibrio parahaemolyticus K5030] gi|149747732|gb|EDM58632.1| thymidylate kinase [Vibrio parahaemolyticus AQ3810] gi|308089015|gb|EFO38710.1| dTMP kinase [Vibrio parahaemolyticus Peru-466] gi|308114687|gb|EFO52227.1| dTMP kinase [Vibrio parahaemolyticus K5030] Length = 209 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 FI EG+EGAGK+T I + L++ + + TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P ++++ S + V+ +I + + E + ++ Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209 >gi|114775378|ref|ZP_01450946.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1] gi|114553489|gb|EAU55870.1| Thymidylate kinase [Mariprofundus ferrooxydans PV-1] Length = 211 Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 98/208 (47%), Gaps = 5/208 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+FEG +G+GK+T + L +L + T EPG T R +LLS Sbjct: 2 GKLITFEGGDGSGKSTQLRLTADWLTSIGKRIITTFEPGDTQLGAKIRQLLLSGEDVPV- 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121 E E ++F A R HV V++PAL G +LCDR+ DS+ AYQ + L + Sbjct: 61 PECEMLLFLADRAQHVREVVQPALQRGDWVLCDRYSDSTLAYQLAARKLGAADELLRQML 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD T+ DLPV L+R++ R E + + + + H++ F A Sbjct: 121 TFAECGVTPDLTLWFDLPVSAALERMRQRQQAGEKST--RLDDEALSFHQRVTAAFASQA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 +P R VD+ +SV + +I+ Sbjct: 179 EAEPGRMMRVDAVGDIKSVEQQVHHIIR 206 >gi|262404371|ref|ZP_06080926.1| thymidylate kinase [Vibrio sp. RC586] gi|262349403|gb|EEY98541.1| thymidylate kinase [Vibrio sp. RC586] Length = 212 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLL-SCG 58 MN+ FI EG+EGAGK+T I ++ L + + TREPGGT AE R ++ Sbjct: 1 MNA-KFIVIEGLEGAGKSTAIQVIVETLHQHGIEQITRTREPGGTVLAEKLRALVKEDHP 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEELQDITELLLVYAARVQLVENVIKPALAQGFWVVGDRHDMSSQAYQGGGRQIALSTMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD T+ LD+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 120 NLKQTALGDFKPDLTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERARQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A D VD+ S + V+ +I + + + + Sbjct: 174 ELAECD-DTVIWVDAEQSIEQVSKDIRTALEDWLNR 208 >gi|261415858|ref|YP_003249541.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372314|gb|ACX75059.1| thymidylate kinase [Fibrobacter succinogenes subsp. succinogenes S85] gi|302327609|gb|ADL26810.1| dTMP kinase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 210 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 7/215 (3%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M + F S EGI+G+GK+T I +L R L+ + + V REPGG +E R +LL Sbjct: 1 MKTAKKFFSLEGIDGSGKSTQIDMLVRVLESEGHKVVRLREPGGAKISERIRELLLDPAF 60 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E +++ AAR + +I+PAL G I++ DRF S++AYQG + Sbjct: 61 KGIMADDTELLLYNAARAQVIHEIIKPALDAGNIVIADRFAWSTFAYQGYARGLGADKVQ 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L E++ P+ T++LDL V+ KR+ R D E + E+ R+ +L Sbjct: 121 RLTELTCGGCFPELTVVLDLTVEASRKRMAIR-----GGAPDRLESEKAEFFERVREGYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R+ D +V++ + V ++L+++ ++ Sbjct: 176 AAGRDYSDCVSVVNADRTPDEVHQDVLSLIKAKLK 210 >gi|260899207|ref|ZP_05907602.1| dTMP kinase [Vibrio parahaemolyticus AQ4037] gi|308108494|gb|EFO46034.1| dTMP kinase [Vibrio parahaemolyticus AQ4037] Length = 209 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 FI EG+EGAGK+T I + L++ + + TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKQAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDLSSQAYQGGGRQINASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ IGL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPRIGLERARGR------GELDRIEKMDISFFERTRERYLEIANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P ++++ S + V+ +I + + E + ++ Sbjct: 179 DPS-IVVINAEQSIEEVSRDIQDALNEWLSRQ 209 >gi|312882454|ref|ZP_07742195.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369854|gb|EFP97365.1| thymidylate kinase [Vibrio caribbenthicus ATCC BAA-2122] Length = 211 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 113/216 (52%), Gaps = 9/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M S FI EG+EGAGK+T I +++ L + TREPGGT AE R ++ Sbjct: 1 MKSAKFIVIEGLEGAGKSTAIRAVEQSLGNLGISQIQKTREPGGTELAEKLRSLVKEEHP 60 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E ++ AAR+ VEN+I+PAL ++ DR SS AYQG + + Sbjct: 61 GEVLQDMTELLLMYAARVQLVENIIKPALENDVWVIGDRHDMSSQAYQGGGRQIANETMS 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L++ ++ P+ TI LD+ +GL+R + R LD E+ D+ E+ RQ +L Sbjct: 121 LLKQTALGCFRPNLTIYLDIEPKLGLERARGR------GELDRIEKMDLGFFERTRQRYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A+ D IVD++ S VA +I +V + VQK Sbjct: 175 ELAKED-DSVFIVDASQSIAQVAESIDKLVTDWVQK 209 >gi|209695681|ref|YP_002263610.1| thymidylate kinase [Aliivibrio salmonicida LFI1238] gi|238057695|sp|B6EJ04|KTHY_ALISL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|208009633|emb|CAQ79929.1| thymidylate kinase [Aliivibrio salmonicida LFI1238] Length = 210 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 9/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE-F 62 FI EG+EGAGK+T I + L + TREPGGTP AE R ++ DE Sbjct: 3 KFIVIEGLEGAGKSTAIKNVLATLAKHGITAPVTTREPGGTPLAEKMRELVKQGHPDEPL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR V NVI+PAL G ++ DR SS AYQG + +++ Sbjct: 63 TDMAELLLLYAARAQLVGNVIKPALAAGNWVVGDRHDLSSQAYQGGGRGFDRELMATMKR 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI +D+ +GL+R R LD E+ + E+ R+ +L+ A Sbjct: 123 TVLGDFTPDLTIYMDIDPKLGLQRASAR------GELDRIEQMKLDFFERSRERYLEFAN 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 N + +D+ +V +I+ + + Sbjct: 177 ND-ESIITIDAGQDLDTVTASIIAALEIWL 205 >gi|330444525|ref|YP_004377511.1| thymidylate kinase [Chlamydophila pecorum E58] gi|328807635|gb|AEB41808.1| thymidylate kinase [Chlamydophila pecorum E58] Length = 206 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 8/207 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT+ +L + L + + +TREPGG P E R ++L + Sbjct: 1 MFIVLEGGEGAGKTSLAEMLHQKLVSEGRSIVMTREPGGCPLGERIRELILQASETKVSQ 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QE 122 E +F A R H++ I PAL G I+LC+RF DS+ YQG + F+ L Q Sbjct: 61 YTELFLFLATRAQHIQETIIPALERGDIVLCERFHDSTIVYQGIAEGLGMSFVSDLCYQA 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I + +PD ++LD+P +IGL R + + LD FE+ + HE R FL +A Sbjct: 121 IGPKPFLPDLVVLLDVPAEIGLSRKVQQKT------LDKFEKNPLSYHEAIRSGFLALAN 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 PDR I+D+ S + +L + Sbjct: 175 ANPDRYLILDARQSLEESVKKVLQHIQ 201 >gi|14520694|ref|NP_126169.1| thymidylate kinase [Pyrococcus abyssi GE5] gi|13629362|sp|Q9V1E9|KTHY_PYRAB RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|5457910|emb|CAB49400.1| tmk thymidylate kinase (dTMP kinase) [Pyrococcus abyssi GE5] Length = 205 Score = 228 bits (583), Expect = 3e-58, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 16/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 G F+ EGI+G+GKTT LL + + + +DV +T+EP T R ++L Sbjct: 2 RGYFVVLEGIDGSGKTTQAKLLAEWFEEQGWDVLLTKEPTDTEFGRLIRELVLKNSIIDG 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EAEA++FAA R +HV+ VI PAL +GK+++CDR+L SS AYQ R L L+ Sbjct: 62 SRISYEAEALLFAADRAEHVKKVILPALEKGKVVICDRYLYSSLAYQWARG----LSLEW 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L +I+ PD I+LDLPV ++R + R ++ E L + + K R +L Sbjct: 118 LMQINSFAPRPDLAILLDLPVKESIRRTKARGNMSEFDKL-------LELQRKVRMNYLK 170 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW-ELV 212 +A + IV++ S + V +I+ +V EL+ Sbjct: 171 LAEMFKE-MRIVNAMASVEEVHEDIVALVKHELL 203 >gi|299143254|ref|ZP_07036334.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517739|gb|EFI41478.1| dTMP kinase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 203 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 113/211 (53%), Gaps = 10/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F++FEG +G GK+T +L+ L+ + YDV TREPGGT +E R+++L E Sbjct: 2 RGIFVTFEGPDGCGKSTIANLVYEKLKAE-YDVVKTREPGGTKISEKIRNIILDNENIEM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA+++AA+R HVE I PAL G I+LC+RF+ SS AYQG ++++ + Sbjct: 61 TSRTEALLYAASRAQHVEEKILPALKNGSIVLCERFVLSSIAYQGFGRGLGRESIENINK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + EV PD + D G + + E D E H + ++ + ++A+ Sbjct: 121 FATGEVEPDVVFLFD----TG--NISSENRKLEFGG-DRIEICGNEFHSRVKEAYRELAK 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++D+ + V + L+I+++ ++ Sbjct: 174 E--KKYCVIDATRGIEEVLNDCLDILYKKLE 202 >gi|315179582|gb|ADT86496.1| thymidylate kinase [Vibrio furnissii NCTC 11218] Length = 209 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 109/216 (50%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS +I EG+EGAGK+T I + L D+ TREPGGT AE R ++ Sbjct: 1 MNS-KYIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E ++ AAR+ VENVI+PAL +G ++ DR SS AYQG + Sbjct: 60 GEVLQDMTELLLMYAARVQLVENVIKPALQQGHWVVGDRHDMSSQAYQGGGRQIARETMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + +++ S + V +I + + + Sbjct: 174 ELAAGD-ESVVTINAEQSIEQVTHDIKQALESWLNR 208 >gi|163839161|ref|YP_001623566.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209] gi|162952637|gb|ABY22152.1| thymidylate kinase [Renibacterium salmoninarum ATCC 33209] Length = 221 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 81/211 (38%), Positives = 117/211 (55%), Gaps = 7/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FI+FEG +GAGK+T LL L+ V +TREPGGTP E R ++L G + Sbjct: 18 RSGFFIAFEGGDGAGKSTQARLLAAALKDLGRQVVLTREPGGTPVGEKLRSLVLDHGQGQ 77 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FAAAR H E VIRPAL EGK+++ DR++DSS AYQG + + Sbjct: 78 IDARTEALLFAAARAAHAEQVIRPALAEGKVVITDRYIDSSIAYQGAGRDLGEDEVRKVN 137 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++P+ TI+LD+ + G R R A D E + H++ RQ FL++A Sbjct: 138 EWATAGLLPELTILLDVAANEGRNR-------RAGARPDRLESEPDNFHDRIRQAFLNLA 190 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P + I+++ S + IL EL+ Sbjct: 191 SARPKQYLILNARLSIDELQQAILQRAKELL 221 >gi|319779570|ref|YP_004130483.1| Thymidylate kinase [Taylorella equigenitalis MCE9] gi|317109594|gb|ADU92340.1| Thymidylate kinase [Taylorella equigenitalis MCE9] Length = 204 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 9/210 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+ EGI+GAGK++HI + F + +V VTREPGG +EA R +LL Sbjct: 2 RGYFITLEGIDGAGKSSHIEYIVDFFESLGREVVVTREPGGNALSEALRGILL---TQPM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E ++ A+R + V +I PAL EGKI++ DRF DS+ AYQG ++ L+ Sbjct: 59 NSLTEVLLMFASRSESVYGIILPALREGKIVISDRFTDSTLAYQGGGRDFSIDVINDLKN 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I ++ PD T++ D+P+++ R+ N +D FE D + R +L +A Sbjct: 119 IVHPDLTPDLTLLFDVPLEVARDRLSN------GRSVDKFEVLDEDFFNRVRNQYLSMAN 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +PDR I+DS+HS V + ++ + Sbjct: 173 YEPDRIKIIDSSHSVTVVRRLVNQVLMNFI 202 >gi|299820920|ref|ZP_07052809.1| thymidylate kinase [Listeria grayi DSM 20601] gi|299817941|gb|EFI85176.1| thymidylate kinase [Listeria grayi DSM 20601] Length = 217 Score = 228 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 66/195 (33%), Positives = 110/195 (56%), Gaps = 4/195 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ EG +G+GKTT + + L +N TREPGG+P +E R V+L G + Sbjct: 9 SGFFITLEGPDGSGKTTVGNKIAEKLTAENIAYIKTREPGGSPISEKLREVILGIGNEAM 68 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAAR HV IRPAL E ++LCDRFLDSS AYQ + + ++ Sbjct: 69 DPRTEVLLIAAARRQHVVETIRPALAENLVVLCDRFLDSSLAYQAGGRNLDMDEVLAINH 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +V++ MPD T LD+P ++GL+R+ + ++ +++D++ H++ + + ++ Sbjct: 129 YAVEDTMPDRTYYLDVPAEVGLERIAAN----KGREINRLDQEDIVYHQRVGRAYAEVMN 184 Query: 183 NQPDRCHIVDSAHSF 197 P+R +D+ + Sbjct: 185 RFPERFKRMDAMQAP 199 >gi|116071493|ref|ZP_01468761.1| Thymidylate kinase [Synechococcus sp. BL107] gi|116065116|gb|EAU70874.1| Thymidylate kinase [Synechococcus sp. BL107] Length = 209 Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats. Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 15/217 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 +G FI +GI+G GK+T I L ++L + TREPGGTP ++ R +LL Sbjct: 2 TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTARLVCTREPGGTPLGQSIRELLLHT 61 Query: 58 GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D+ AE +++AA R HV++VIRPAL+ G +L DRF S+ AYQG Sbjct: 62 EADQVPSVTAELLLYAADRAQHVDSVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRPL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ + PD T+ L +PV++ L+R R D E + + Sbjct: 122 ITRLESIATTGLEPDLTVWLMVPVEVSLQR-------RHGEKEDRIEAEGRAFLHRVADG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 F +A + +D+ S ++ + I+ E +Q Sbjct: 175 FSALAEQR--NWCRLDAQQSVSQLSQELEQILRESLQ 209 >gi|319399639|gb|EFV87893.1| thymidylate kinase [Staphylococcus epidermidis FRI909] Length = 203 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 113/208 (54%), Gaps = 8/208 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG EGAGKT+ I + L ++ YD+ TREPGG +E R ++L + Sbjct: 4 FITFEGPEGAGKTSVIKEVSERLAKE-YDIVTTREPGGVLTSEEIRRIVLDG--ESIDIR 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++FAA+R +H+ I P+L KI+LCDR++DSS AYQG + L E ++ Sbjct: 61 TEAMLFAASRREHLVEKIIPSLQADKIVLCDRYIDSSLAYQGYARGIGIKEVKLLNEFAI 120 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + PD TI LD+ +IG +R+ L+ + + +++D + HEK + + + + P Sbjct: 121 NGLYPDLTIYLDVDAEIGRQRI-----LKNNREQNRLDKEDKVFHEKVIEGYHKVISDNP 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 R V++ HS V + + ++ Sbjct: 176 HRFIKVNANHSLDKVVEETYQSIIKYLK 203 >gi|160946460|ref|ZP_02093669.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270] gi|158447576|gb|EDP24571.1| hypothetical protein PEPMIC_00424 [Parvimonas micra ATCC 33270] Length = 209 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 9/215 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+FEG +G GKT+ ++L+K + + N + TREPGGT +E R ++LS Sbjct: 2 GLFITFEGPDGCGKTSIMNLIKEYYKS-NEKIIFTREPGGTKISEKIREIILSNDNSNMS 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++++A+R H++ +I+P L +G I++ DRF+ SS AYQG + + + Sbjct: 61 PRTEALLYSASRAQHIDELIKPNLDKGNIVISDRFVLSSLAYQGGGRELGVENVKKINDF 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ V PD I + LKR D E H + ++++ Sbjct: 121 AINGVNPDMIIFFYVDPLTTLKRKSLNVDA------DRLELSGDDFHSRVYDTYMELLEK 174 Query: 184 QPDR--CHIVDSAHSFQSVATNILNIVWELVQKRV 216 D VD+ S V ++ NI+ E +++ + Sbjct: 175 MKDEKVLKKVDATKSMSEVFEDVKNIIDEKLEELL 209 >gi|332157932|ref|YP_004423211.1| thymidylate kinase [Pyrococcus sp. NA2] gi|331033395|gb|AEC51207.1| thymidylate kinase [Pyrococcus sp. NA2] Length = 205 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 16/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 G FI FEGI+G+GKTT LL ++ + Y+V +T+EP T + R ++L Sbjct: 2 KGYFIVFEGIDGSGKTTQAKLLAKWFRDNGYEVLLTKEPTDTEFGKLIRKLVLEGSIIDG 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EAEA++FAA R +HV+ +I PAL EGKI++CDR+L SS AYQ R L L+ Sbjct: 62 SRISYEAEALLFAADRAEHVKKIILPALREGKIVICDRYLYSSLAYQWARG----LDLEW 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L +++ D I+LDLP+ L+R++ R E L V + K R+ +L Sbjct: 118 LIKVNSFAPRADLVILLDLPITKSLERIRGRVIKTEFDKL-------VELQRKVRENYLK 170 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW-ELV 212 +A P+ +VD+ + + V N++ +V EL+ Sbjct: 171 LAEMFPE-IRVVDAMANIEDVHNNVVTLVKHELL 203 >gi|325849205|ref|ZP_08170656.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480205|gb|EGC83272.1| dTMP kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 209 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 111/213 (52%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GL I FEG +G+GKTT + + L + YD++ REPGGT +E R ++L + Sbjct: 2 NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA+R +E +RP L +G I+LCDRF+ SS YQG + + + Sbjct: 62 SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQGIGRGLGIDEVKKIND 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ E+ D T+ L++ + R + + D E +D H+K + ++D+++ Sbjct: 122 FAIGEIKADLTLFLNIDYKTAIDRKRKNF------VSDRLENEDDSFHKKTYEGYIDLSK 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D +D+ S V N ++ + ++++ Sbjct: 176 RFKDEIISIDANKSLDIVVDNCIDTIKTYIKEK 208 >gi|118594886|ref|ZP_01552233.1| thymidylate kinase [Methylophilales bacterium HTCC2181] gi|118440664|gb|EAV47291.1| thymidylate kinase [Methylophilales bacterium HTCC2181] Length = 204 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 124/212 (58%), Gaps = 9/212 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN LFIS EG++GAGKTTHI ++ + + K ++TREPGGT E R + Sbjct: 1 MNKPLFISLEGVDGAGKTTHIHFIEDYFRTKGLPFYMTREPGGTDLGEKLRL---LLLHE 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A E ++ AAR +H++ +I+P L +G ++ DRF D++YAYQ +D L Sbjct: 58 EMDALTETMLMFAARCEHIQTIIKPKLDQGITVVSDRFTDATYAYQAGGKGVDARSIDVL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +++ PD T + D+PV+I ++R++ ++ +D FER++ + H+ R +LD+ Sbjct: 118 KSLVQKDLDPDLTFLFDVPVEISIERLK------DTRTMDKFEREEPIFHQSIRNAYLDL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A++ P R H+++ H+ +++ I I+ + Sbjct: 172 AQSFPQRFHVLNGTHAIEAIQDEIKLILDRRL 203 >gi|311112929|ref|YP_003984151.1| thymidylate kinase [Rothia dentocariosa ATCC 17931] gi|310944423|gb|ADP40717.1| thymidylate kinase [Rothia dentocariosa ATCC 17931] Length = 263 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 7/215 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI FEG +GAGKTT ++ L+ L+ + Y V TREPGGTP EA R ++L G E Sbjct: 32 RRGLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSE 91 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A AEA++FAA+R H IRPAL G ++L DR+LDSS AYQG + + L Sbjct: 92 VDARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQGIGRNLGKDTITDLS 151 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++++P TI+LD+P+ +R+ +R +D E + + F DIA Sbjct: 152 RWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKARVHTAFADIA 205 Query: 182 RNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215 R D H +VD S +V +L +V L++ R Sbjct: 206 RQNADGAHYVVDGCGSVDAVHERVLEVVRPLLESR 240 >gi|284007284|emb|CBA72610.1| thymidylate kinase [Arsenophonus nasoniae] Length = 211 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 M S +I EG+EGAGKTT I + + L ++ TREPGGTP AE R ++ Sbjct: 1 MKS-RYIVIEGLEGAGKTTAIKTVVQTLATVGITEIDFTREPGGTPLAEKLRQLIKHGIA 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +AE ++ AAR+ +ENVI+PAL +G+ ++ DR SS AYQG + Sbjct: 60 EEKVTDKAELLMLYAARIQLIENVIKPALAKGRWVIGDRHDLSSQAYQGGGRGLSPELMK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ + + PD T+ LD+ +GL+R ++R LD E++ + ++ RQ +L Sbjct: 120 VLRNTILDDFRPDLTLYLDIEPALGLQRARDR------GELDRIEKESLDFFKRTRQRYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A D +D+ S + V I +++ + + Sbjct: 174 ELAAED-DTIITIDANQSLEEVQKTIHHVLSNWLTAQ 209 >gi|308049573|ref|YP_003913139.1| thymidylate kinase [Ferrimonas balearica DSM 9799] gi|307631763|gb|ADN76065.1| thymidylate kinase [Ferrimonas balearica DSM 9799] Length = 207 Score = 227 bits (581), Expect = 5e-58, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 10/208 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60 G FI EG+EGAGK+T I+++ ++L+++ ++ TREPGGTP AE R + + Sbjct: 4 QGTFIVIEGLEGAGKSTAIAVVDQYLKQRFPEREIVHTREPGGTPLAEEIRAIWKQPREE 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ A R VE+VI+PAL G I++ DR SS AYQG + L Sbjct: 64 AMAPMTELLMVYACRAQLVESVIKPALARGAIVVGDRHDLSSKAYQGGGRGL-AEPVARL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ + PD T+ LD+ +GL R + R LD E++ + ++ R + Sbjct: 123 SALTLGDFAPDLTLYLDIDPAVGLARARAR------GELDRIEQEALAFFQRARATYQAE 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A P R +D+ S + V +++N + Sbjct: 177 AAADP-RIVTIDAGQSLEQVHQSLINAL 203 >gi|91228553|ref|ZP_01262473.1| thymidylate kinase [Vibrio alginolyticus 12G01] gi|91187877|gb|EAS74189.1| thymidylate kinase [Vibrio alginolyticus 12G01] Length = 209 Score = 227 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 FI EG+EGAGK+T I + L+ D+ TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIEDIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALENGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPALTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P I+++ + + V+ +I + + E + ++ Sbjct: 179 DPS-IVIINAEQTIEGVSRDIRDALNEWLARQ 209 >gi|187478259|ref|YP_786283.1| thymidylate kinase [Bordetella avium 197N] gi|115422845|emb|CAJ49373.1| thymidylate kinase [Bordetella avium 197N] Length = 214 Score = 227 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 9/209 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG++GAGK+TH + L LQ + +DV TREPGGTP E R + G Sbjct: 12 GRFITLEGVDGAGKSTHTTWLVDTLQERGFDVVSTREPGGTPLGERLRE---LLLTQDMG 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E ++ AAR +H+++VI PAL G ++CDR+ D++YAYQG + L++ Sbjct: 69 LDTETLLMFAARSEHLQHVIVPALARGAWVVCDRYTDATYAYQGGGRGLGAARVALLEQW 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T + D+P+ + R+ LD FE++ E+ R + A Sbjct: 129 LQPPLRPDLTWLFDVPLAVARARMAG------ERQLDRFEQEAEAFFERTRTAYHARAAA 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R HI+D++ V + + + + Sbjct: 183 EPGRMHIIDASRPLDEVRRALEQDLLQFL 211 >gi|313902253|ref|ZP_07835659.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965] gi|313467483|gb|EFR62991.1| thymidylate kinase [Thermaerobacter subterraneus DSM 13965] Length = 250 Score = 227 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 9/215 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG EG+GK+T +++ +L+ + + REPGGT E R +LL Sbjct: 45 RRGWFITLEGGEGSGKSTQAAVVMDWLRSRGIPSRLVREPGGTALGERLRELLLDGAGRP 104 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++FAAAR VE VI PAL+ G+ ++CDR++DSS AYQG + S+ Sbjct: 105 V-PMAEMLMFAAARAQLVETVILPALLAGETVVCDRYVDSSLAYQGAGLGLGGTTVWSVN 163 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + ++PD T++ D P D+ R++ D E +D H + RQ +LD+A Sbjct: 164 RLATRGLLPDLTLLFDCPPDVARARLR--------RPADGIESRDTGFHHRVRQGYLDLA 215 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R +P R ++D+ VA + + + R+ Sbjct: 216 RAEPRRIVVIDATRPALVVAEAVREALERTLGPRL 250 >gi|157956091|gb|ABW06433.1| thymidylate kinase [Wheat blue dwarf phytoplasma] Length = 207 Score = 227 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EGAGKTTH L L +K Y +T+EPGGT E R++LL + Sbjct: 1 MFISFEGCEGAGKTTHSRYLFEKLSKK-YSCVLTKEPGGTLFNEVIRNILLHSSNKQIDF 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA R +H+ +I PAL + KI++CDR+LDS+ AYQG F+ ++ + Sbjct: 60 HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQGYARGLSQDFVLNINNFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MP+ T LDL IG++RV+ ++ F+ + + H+K R+ +LD+ + Sbjct: 120 IN-YMPNITFYLDLDPKIGIQRVKQ----FRPKEINSFDLQKLSFHKKVRKGYLDLLQKD 174 Query: 185 PD-RCHIVDSAHSFQSVATNILNIVWELVQ 213 R ++D++ + + I + E+ Q Sbjct: 175 QQKRIFLIDASKRLEVIYNIIEQKLKEVFQ 204 >gi|127512508|ref|YP_001093705.1| dTMP kinase [Shewanella loihica PV-4] gi|166223116|sp|A3QD98|KTHY_SHELP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|126637803|gb|ABO23446.1| thymidylate kinase [Shewanella loihica PV-4] Length = 210 Score = 227 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59 NS FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + Sbjct: 4 NSAKFIVIEGLEGAGKSSAIALVRDFIEKHNGVPPVCTREPGGTPLAERIRDLVKIADPN 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D E+E ++ AAR V NVI+PAL +G +L DR SS AYQG +++ Sbjct: 64 DPLCDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRQLMP-LVEA 122 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++++ PD T+ LD+ +GL+R ++R LD E++ + E+ R +L Sbjct: 123 VSQATLKDFKPDLTLYLDIDPQLGLQRARDR------GALDRIEQQALSFFERARATYLQ 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A + ++D++ + V IL ++ Sbjct: 177 LAARD-ESIVVIDASQTMAQVHKEILAVLQR 206 >gi|54308393|ref|YP_129413.1| thymidylate kinase [Photobacterium profundum SS9] gi|59798292|sp|Q6LSW5|KTHY_PHOPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46912821|emb|CAG19611.1| putative thymidylate kinase [Photobacterium profundum SS9] Length = 209 Score = 227 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 115/213 (53%), Gaps = 9/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE-F 62 FI EG+EGAGK+T I + L + TREPGGTP AE R ++ DE Sbjct: 4 KFIVIEGLEGAGKSTAIQQVIDALAAHGIENPESTREPGGTPLAEQMRALIKEGHPDEPL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR+ V+N+I+PAL EG+ ++ DR SS AYQG +++L++ Sbjct: 64 TDMAELLLLYAARIQLVDNIIKPALAEGRWVVGDRHDMSSQAYQGGGRGFDKALMENLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD TI +D+ +GL+R + R LD E+ +V + R FL+++ Sbjct: 124 TVLGDFCPDLTIYMDIDPILGLERARGR------GELDRIEKMNVDFFHRARARFLELSE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 N P + I+D+ S ++V +++ + ++K+ Sbjct: 178 NNP-KVIIIDAGQSLENVTSDLKQALNHWLEKQ 209 >gi|323491965|ref|ZP_08097134.1| thymidylate kinase [Vibrio brasiliensis LMG 20546] gi|323313823|gb|EGA66918.1| thymidylate kinase [Vibrio brasiliensis LMG 20546] Length = 209 Score = 227 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M + FI EG+EGAGK+T I+ + L++ + + TREPGGT AE R ++ Sbjct: 1 MKNAKFIVIEGLEGAGKSTAINAVLETLKQAGVERIQHTREPGGTALAEKLRTLVKQEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL +G+ ++ DR SS AYQG + Sbjct: 61 GEELQDMTELLLMYAARVQLVENVIKPALADGRWVVGDRHDMSSQAYQGGGRQIPRETML 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD TI LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 ALKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +IA D ++++ VA +I + V Sbjct: 175 EIANQD-DSVIVINAEQEIPQVAADISAALSAWVN 208 >gi|317050750|ref|YP_004111866.1| thymidylate kinase [Desulfurispirillum indicum S5] gi|316945834|gb|ADU65310.1| thymidylate kinase [Desulfurispirillum indicum S5] Length = 208 Score = 227 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 110/210 (52%), Gaps = 8/210 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G FISFEG +GAGKTT +SLL R+L ++ H TREPGGTP AEA R+++ + Sbjct: 1 MN-GRFISFEGPDGAGKTTQLSLLSRYLDDRDILHHCTREPGGTPGAEAIRNLIFDSRHN 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE ++FAAAR HVE I P L +G +LCDRF S+ YQG + L Sbjct: 60 LV-PRAELLLFAAARAQHVEERIMPLLEKGIWVLCDRFTLSTLVYQGYGRGLDRELIGQL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I+ + P ++LD+ + G RVQ R S F+ H + F ++ Sbjct: 119 NAIATCGLAPHMQLVLDVEAEAGQNRVQQRLENNNS-----FDALSEDFHRRVVAGFREV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A + C ++D + + + V +I+ + E Sbjct: 174 ASHDAH-CRLIDGSRNPEQVHGSIVAALHE 202 >gi|117621308|ref|YP_856780.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|254808271|sp|A0KKH9|KTHY_AERHH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|117562715|gb|ABK39663.1| thymidylate kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 213 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 63/218 (28%), Positives = 108/218 (49%), Gaps = 8/218 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI EG+EGAGK++ + + +L + TREPGGTP AE R ++ + Sbjct: 3 KFIVIEGLEGAGKSSAVRYVADYLHGHGVARIECTREPGGTPLAERMRAIVKEVHDERLT 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++ A+R+ VE I+PAL +G ++ DR SS AYQG + +++ Sbjct: 63 IEAELLLMYASRVQLVETRIKPALADGIWVVGDRHDLSSQAYQGGGRGIDANLIGAIKRA 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T+ LD+ IGL+R ++R LD E + + E+ RQ +L++A Sbjct: 123 VLGDFKPDLTLYLDIDPAIGLQRARHR------GELDRIELEQLSFFERTRQRYLELAAA 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + ++D+ + + V I + ++ S + Sbjct: 177 D-ESIKVIDAGQAPEQVKAAIEAALAHYLKDEPSCIPG 213 >gi|221134523|ref|ZP_03560828.1| thymidylate kinase [Glaciecola sp. HTCC2999] Length = 211 Score = 227 bits (580), Expect = 8e-58, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 9/214 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI EG+EGAGK+T I ++R L+ +++ +TREPGGTP AEA R + Sbjct: 1 MTKLGQFIVVEGLEGAGKSTVIKAIQRELEAHGHELKLTREPGGTPMAEAIRDCVKHDWQ 60 Query: 60 DEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE + E ++ AAR +EN I+PAL G +L DR SS AYQG L+ Sbjct: 61 DEIVTEQTELLLMYAARSQLIENTIKPALANGIWVLGDRHDWSSLAYQGGGRQVNLAHLN 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +++E+++ + TI LD+ +GL R R LD E+ + E+ R+ +L Sbjct: 121 AIRELTLDGFTANLTIYLDINPKVGLSRAAAR------GELDRIEQSGLAFFERARETYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ + D ++D+ S V +++ V + + Sbjct: 175 NLVK-NSDSAILIDAEQSIDKVREDVITAVRQFL 207 >gi|330829693|ref|YP_004392645.1| Thymidylate kinase [Aeromonas veronii B565] gi|328804829|gb|AEB50028.1| Thymidylate kinase [Aeromonas veronii B565] Length = 213 Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI EG+EGAGK++ + + +LQR + + TREPGGTP AE R ++ + Sbjct: 3 KFIVIEGLEGAGKSSAVRYVTDYLQRHGINRIECTREPGGTPLAERMRAIVKEVHDERLT 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE ++ A+R+ VE I+PAL +G ++ DR SS AYQG + ++++ Sbjct: 63 IEAELLLMYASRVQLVETRIKPALADGVWVVGDRHDLSSQAYQGGGRGIDAQLIGAIKQA 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+ LD+ +GL+R ++R LD E + + E+ R +L++A Sbjct: 123 VLGNFKPDLTLYLDIDPALGLQRARHR------GELDRIELEQLSFFERTRTRYLELAAK 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 D ++D+A + + V I + + Sbjct: 177 D-DSIVVIDAAQTPEQVKAAIERALDHYL 204 >gi|291278502|ref|YP_003495337.1| dTMP kinase [Deferribacter desulfuricans SSM1] gi|290753204|dbj|BAI79581.1| dTMP kinase [Deferribacter desulfuricans SSM1] Length = 215 Score = 227 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 117/213 (54%), Gaps = 4/213 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + F+ +GI+G GKTT LLK +L ++ +T+EPGGT R++L+S D Sbjct: 4 IKKSFFLVIDGIDGCGKTTQCKLLKEYLNNIGLNILLTKEPGGTKTGTILRNILISTDYD 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++++A RL+H + +I P L GK ++CDRF+ S+YAYQ + FL L Sbjct: 64 -IEPNTELLLYSADRLEHQKKIIIPGLNSGKTIICDRFISSTYAYQIFARGLEKSFLQYL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLD 179 ++ +V + PD TII+DLPV+I L+R R + + FE+ + ++K R+ FL Sbjct: 123 EQHTVFK-WPDLTIIIDLPVEIALERALKRLKDQNCENSEGKFEKNGIDFYKKVREGFLW 181 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++N + +++ S+ I +IV E + Sbjct: 182 YSKNYKN-VKVINGDRDIDSLFKEIKSIVNEKL 213 >gi|217976730|ref|YP_002360877.1| dTMP kinase [Methylocella silvestris BL2] gi|217502106|gb|ACK49515.1| dTMP kinase [Methylocella silvestris BL2] Length = 233 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 87/215 (40%), Positives = 127/215 (59%), Gaps = 3/215 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+ EG EG GK+T I L + L+ + + TREPGG+ AE R VLLS V Sbjct: 13 RRGRLITLEGGEGVGKSTQIGRLLQRLRDEGIEAVATREPGGSEGAEILRRVLLSGVVKP 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G AEAI+FAAAR+DH++ +I PAL G ++ DRF DS+ AYQG S + +++L+ Sbjct: 73 LGPAAEAILFAAARIDHIDALIEPALAAGIWVVSDRFADSTRAYQGGAGSLDNRLINALE 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++ PD T+ILDLP GL + +++ +D FE +D+ HE R FL IA Sbjct: 133 RTALGDLQPDLTLILDLPPGEGL--RRAAARRKDADGVDRFEGEDLRFHEAIRAAFLTIA 190 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE-LVQKR 215 + P RC +VD++ S VA I V + L+++R Sbjct: 191 ADNPQRCVVVDASASEVEVAAAIWTAVSDRLLKER 225 >gi|330825750|ref|YP_004389053.1| Thymidylate kinase [Alicycliphilus denitrificans K601] gi|329311122|gb|AEB85537.1| Thymidylate kinase [Alicycliphilus denitrificans K601] Length = 218 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 17/208 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+FEGI+GAGK++HI L R L+ V +TREPGGTP AE R +LL+ D Sbjct: 1 MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLN---D 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E ++ AAR DH+ VI PAL G+ +LCDRF D+++AYQG L + Sbjct: 58 AMDALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117 Query: 121 QEISVQE--------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ + PD T+ D+P ++ L + D FE + V + Sbjct: 118 ERLAQTGIGLGPDSMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + + D A P R +D A + V Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199 >gi|58038509|ref|YP_190473.1| thymidylate kinase [Gluconobacter oxydans 621H] gi|81557238|sp|Q5FUU6|KTHY_GLUOX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58000923|gb|AAW59817.1| Thymidylate kinase [Gluconobacter oxydans 621H] Length = 214 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 8/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+ EG EGAGK+T LL L+ + + V +TREPGGTP AE R++LL VD Sbjct: 4 KGLFITLEGGEGAGKSTQARLLAEALRAEGHKVLLTREPGGTPGAEEIRNLLLFGKVD-L 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR DH++N I PAL G+I++CDRF DS+ AYQG + + Sbjct: 63 SWRAEILMHMAARSDHLDNAILPALERGEIVVCDRFHDSTLAYQGYGIGQGAPEVLAFLN 122 Query: 123 ISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T++L+LP L R++ R D +E + HE+ F I Sbjct: 123 GARKLVDFEPDLTLMLELPRPQALARLKAR-----GGQTDRYEAQAEAFHERVLAGFDAI 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A P R VD+ + ++V+ +L V E + Sbjct: 178 ASADPVRVKRVDAGQTPEAVSAALLQAVHESL 209 >gi|270156732|ref|ZP_06185389.1| thymidylate kinase [Legionella longbeachae D-4968] gi|289164821|ref|YP_003454959.1| thymidylate kinase [Legionella longbeachae NSW150] gi|269988757|gb|EEZ95011.1| thymidylate kinase [Legionella longbeachae D-4968] gi|288857994|emb|CBJ11854.1| putative thymidylate kinase [Legionella longbeachae NSW150] Length = 212 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 8/213 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEF 62 G I EG+EGAGK+T ++ + L + TREPGGT E R+++ + D Sbjct: 6 GKLIVIEGLEGAGKSTAVNTVVDLLAERQIKTITTREPGGTAIGEILRNLIKNPEYRDVL 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ AR+ ++ VI PAL +G ++ DRF S+ AYQG + L Sbjct: 66 DDRSELLLLYTARIQLLKQVIEPALQKGMWVIADRFELSTMAYQGGGRGLDQEMIRHLSS 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 S+Q + PD T+ LD+ + G++RV++R LD E++ + + +L + Sbjct: 126 FSLQGLKPDLTLYLDISPEEGMRRVKSR------GTLDRIEQQSIEFFHRVHDSYLQYIK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P +++A ++V + + E ++ + Sbjct: 180 MNP-YVVRINAALPLKNVQLALQKAINEFIEHQ 211 >gi|293396570|ref|ZP_06640846.1| dTMP kinase [Serratia odorifera DSM 4582] gi|291420834|gb|EFE94087.1| dTMP kinase [Serratia odorifera DSM 4582] Length = 212 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 109/217 (50%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS F+ EG+EGAGKTT + L++ D+ TREPGGTP AE R + Sbjct: 1 MNS-KFVVIEGLEGAGKTTARDTVVDVLRQHGINDIVFTREPGGTPLAEKLRDLFKRGYQ 59 Query: 60 DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 60 GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQRLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + + PD T+ LDLP +GL+R Q R LD E++ + E+ R + Sbjct: 120 SLRDTVLGDFRPDLTLYLDLPPLVGLQRAQAR------GALDRIEQEALPFFERTRARYQ 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A +D+A + V +I V +Q++ Sbjct: 174 QLAAAD-ATIITIDAAQPLEQVTGDIGRCVAAWLQQQ 209 >gi|283458750|ref|YP_003363389.1| thymidylate kinase [Rothia mucilaginosa DY-18] gi|283134804|dbj|BAI65569.1| thymidylate kinase [Rothia mucilaginosa DY-18] Length = 239 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 111/224 (49%), Gaps = 7/224 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI EG +GAGKTT ++LL L + Y V TREPGGT E R ++L G Sbjct: 21 RRGLFIVVEGGDGAGKTTQLALLNEALSARGYRVITTREPGGTEIGEKLRALVLEAGQGT 80 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAA+R H +IRPAL EG I+L DR++DSS AYQG + L Sbjct: 81 IDDRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGIETIVDLS 140 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +++PD T++L +P+ +R+ R +D E + + F IA Sbjct: 141 RWATADLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGAAFKARIHGAFEQIA 194 Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 R + I+D + V +L ++ L+ R + ++D Sbjct: 195 REDANGSHRIIDGVGTIDEVHARVLEVIEPLLAARELVRTGQED 238 >gi|39938716|ref|NP_950482.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|59798379|sp|Q7WSH2|KTHY_ONYPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33563105|dbj|BAC81721.1| thymidylate kinase [Onion yellows phytoplasma] gi|39721825|dbj|BAD04315.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 207 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 115/210 (54%), Gaps = 7/210 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKTTH L L +K Y +T+EPGG E R++LL + Sbjct: 1 MFISFEGCEGTGKTTHSRYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSSNKQIDF 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA R +H+ +I PAL + KI++CDR+LDS+ AYQ F+ ++ + Sbjct: 60 HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSQDFVLNINNFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + P+ T LDL IG++RV+ ++ F+ + + H+K R+ +LD+ + Sbjct: 120 LNYI-PNITFYLDLDPKIGIQRVKQ----FRPKEINSFDLQKLSFHKKVRKGYLDLCQKD 174 Query: 185 PD-RCHIVDSAHSFQSVATNILNIVWELVQ 213 R ++D++ +++ I + E+ Q Sbjct: 175 QQKRIFLIDASKPLENIYNIIEQKLKEVFQ 204 >gi|157961746|ref|YP_001501780.1| thymidylate kinase [Shewanella pealeana ATCC 700345] gi|157846746|gb|ABV87245.1| dTMP kinase [Shewanella pealeana ATCC 700345] Length = 214 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 10/208 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + D Sbjct: 12 KFIVIEGLEGAGKSSAIALVRDFIEKHTGKAPICTREPGGTPLAEQMRDLVKIANESDPL 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++F AAR V NVI+PAL G+ +L DR SS AYQG + ++ + Sbjct: 72 CDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRKLMP-LVSAISD 130 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ PD T+ LD+ +GL+R R LD E++++ ++ R FL A Sbjct: 131 ATLKGFKPDLTLYLDIDPKLGLERAARR------GELDRIEQQEIEFFKRTRATFLSFAD 184 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 + IVD++ S V +I+ ++ E Sbjct: 185 AD-ESIKIVDASQSMAEVHKDIIALLQE 211 >gi|212635620|ref|YP_002312145.1| thymidylate kinase [Shewanella piezotolerans WP3] gi|212557104|gb|ACJ29558.1| Thymidylate kinase [Shewanella piezotolerans WP3] Length = 214 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 114/211 (54%), Gaps = 10/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59 F+ EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + Sbjct: 9 RKAKFVVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKVANES 68 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++F AAR V NVI+P+L EGK +L DR SS AYQG + S Sbjct: 69 DPLCDEAECLIFYAARAQLVANVIKPSLAEGKWVLGDRHNLSSLAYQGGGRGLMP-LVSS 127 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E +++ PD T+ LD+ +GL R NR LD E++++ + R FL Sbjct: 128 ISEATLKGFKPDLTLYLDIDPKLGLARAANR------GALDRIEQQELAFFNRTRATFLS 181 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A N D I+D++ S +V +I+ ++ + Sbjct: 182 YADND-DSIMIIDASQSMAAVHKDIIAVLQD 211 >gi|150020819|ref|YP_001306173.1| dTMP kinase [Thermosipho melanesiensis BI429] gi|166223124|sp|A6LLI7|KTHY_THEM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|149793340|gb|ABR30788.1| dTMP kinase [Thermosipho melanesiensis BI429] Length = 199 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 11/208 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEGI+G+GK+T + LL+++L + V REPGGT E R +LL+ Sbjct: 1 MFIAFEGIDGSGKSTQLVLLEKYLINRGKKVIKVREPGGTILGEKIRDLLLNFN---MNK 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE VIRP++ +G +L DRF DSS AYQG + ++ L + Sbjct: 58 RSELLLFLASRAQLVEEVIRPSIEKGYFVLADRFSDSSIAYQGGARNLGKDLVEKLNIFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +D+PV + ++R++ + D E++ EK R +L IA+++ Sbjct: 118 TNGIFPDIVFFIDIPVQMAVRRMKEKEK-------DRIEKEGEDFLEKVRTTYLHIAKSR 170 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++D V + I I+ ++ Sbjct: 171 KN-FFVIDGTKDVDYVFSQIKRIIDTML 197 >gi|332178700|gb|AEE14389.1| Thymidylate kinase [Thermodesulfobium narugense DSM 14796] Length = 214 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 101/214 (47%), Gaps = 10/214 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+FEGIE GKTT LL L V ++PG T E R+ LL Sbjct: 5 KKGLFITFEGIEKCGKTTQSKLLYDKLLSLGEKVVYLKDPGVTEVGENFRNALLYGKN-- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E ++F A R V I PAL + KI++CDRF DS++AYQG + FL SL Sbjct: 63 ISVETEVLLFLACRAQLVNEHIFPALKDDKIVICDRFSDSTFAYQGYGRNVNLSFLKSLD 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + + PD T + D +R D E + + H + R +LD+A Sbjct: 123 KFATKGIKPDITFLFDFSFFEAKQRF--------LDSKDRMETESIEFHNRVRAGYLDLA 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +PDR I+ S + + + +L V E +R Sbjct: 175 SMEPDRFCILYSKLNIEKLHEIVLKKVLERKNER 208 >gi|103486743|ref|YP_616304.1| thymidylate kinase [Sphingopyxis alaskensis RB2256] gi|98976820|gb|ABF52971.1| thymidylate kinase [Sphingopyxis alaskensis RB2256] Length = 207 Score = 226 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 107/212 (50%), Gaps = 6/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+ EG EG GK+T + L L ++ +V TREPGG+ AEA R +L+ D Sbjct: 1 MIRGRFITLEGGEGVGKSTQLRALSEALAARSIEVVATREPGGSVGAEAIRTLLMEGSDD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A +EA++FAAAR DHV IRPAL G +LCDRF+DSS AYQG + +L Sbjct: 61 RWDARSEALLFAAARADHVARTIRPALARGAWVLCDRFVDSSRAYQGGGGGITDADILAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++PD T +L + D +R+ R D K + F ++ Sbjct: 121 HRFGSRGLLPDRTFLLTVRPDEAARRLAARGDR------DRMGSKPADYQARLAARFAEM 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +P R ++D+ V +L + E + Sbjct: 175 AATEPQRWRLIDADLPAADVTAAMLAELIEWL 206 >gi|291617041|ref|YP_003519783.1| Tmk [Pantoea ananatis LMG 20103] gi|291152071|gb|ADD76655.1| Tmk [Pantoea ananatis LMG 20103] Length = 211 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 9/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEF 62 FI EG+EGAGKTT + L+ D + TREPGGTP AE R ++ ++ Sbjct: 4 KFIVIEGLEGAGKTTARDAVVATLRASGIDDIVFTREPGGTPLAEQLRVLVKQGIEGEQI 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + +L++ Sbjct: 64 TDKAELLMLYAARVQLVETVIKPALARGPGVIGDRHDLSSQAYQGGGRGLDAELMRTLRD 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ + GL+R + R LD E++ + E+ R+ +L +A Sbjct: 124 TVLGDFRPDLTLYLDVTPETGLQRARAR------GELDRIEQESLRFFERTRERYLALAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D +D+ + V + + + + ++ Sbjct: 178 AD-DSILTIDATQPLEQVTSALHATLTAWLAEQ 209 >gi|254507623|ref|ZP_05119756.1| thymidylate kinase [Vibrio parahaemolyticus 16] gi|219549510|gb|EED26502.1| thymidylate kinase [Vibrio parahaemolyticus 16] Length = 210 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 9/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M+ FI EG+EGAGK+T I+ + L++ + + TREPGGT AE R ++ Sbjct: 1 MSQAKFIVIEGLEGAGKSTAINAVMETLKQAGVERIKNTREPGGTVLAEKLRTLVKQEHD 60 Query: 60 DEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E ++ AAR+ VENVI+PAL G ++ DR SS AYQG + Sbjct: 61 GEILQDMTELLLMYAARVQLVENVIKPALESGTWVVGDRHDMSSQAYQGGGRQIAKETMA 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ + PD TI LDL +GL+R + R LD E+ D+ ++ R+ +L Sbjct: 121 SLKQTTLGDFKPDLTIYLDLDPRVGLERARGR------GELDRIEKMDMSFFDRTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++A + +V++ + VA +I + + Sbjct: 175 EMANAD-ESVMVVNAEQTIDKVAADIKIALRSWM 207 >gi|15606283|ref|NP_213662.1| thymidylate kinase [Aquifex aeolicus VF5] gi|6016457|sp|O67099|KTHY_AQUAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|158429380|pdb|2PBR|A Chain A, Crystal Structure Of Thymidylate Kinase (Aq_969) From Aquifex Aeolicus Vf5 gi|158429381|pdb|2PBR|B Chain B, Crystal Structure Of Thymidylate Kinase (Aq_969) From Aquifex Aeolicus Vf5 gi|2983484|gb|AAC07063.1| thymidylate kinase [Aquifex aeolicus VF5] Length = 195 Score = 226 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 117/209 (55%), Gaps = 15/209 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GKTT L +L++K Y V + REPGGT E R +LL +E Sbjct: 1 MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILL---TEELDE 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A+R +E I P L K+++ DRF+ S+ AYQG F+ +L E + Sbjct: 58 RTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + V PD T++LD+PVDI L+R++ + + FE K EK R+ FL++A+ + Sbjct: 118 TRGVKPDITLLLDIPVDIALRRLKEK---------NRFENK--EFLEKVRKGFLELAKEE 166 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++D++ + V IL + +++ Sbjct: 167 -ENVVVIDASGEEEEVFKEILRALSGVLR 194 >gi|330994629|ref|ZP_08318552.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1] gi|329758270|gb|EGG74791.1| Thymidylate kinase [Gluconacetobacter sp. SXCC-1] Length = 213 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 86/215 (40%), Positives = 118/215 (54%), Gaps = 7/215 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+FEG EGAGK+T LL L+ +DV +TREPGGT AAEA R LL G D Sbjct: 2 RGLFITFEGGEGAGKSTQARLLADHLRAHGHDVDLTREPGGTEAAEALRDFLLFGGHD-L 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQ 121 A AE + AAR DHV+ I PAL +G+I++CDRF DS+ AYQG + LD + Sbjct: 61 SARAEVLTHFAARADHVDRRILPALAQGRIVVCDRFADSTEAYQGYGVSHADTGLLDMIG 120 Query: 122 EI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ ++ V PD T +L +P D+ R++ R R D +E +D H + F I Sbjct: 121 QLRAMLPVQPDLTFVLQVPPDVARDRLRQRADGR----ADRYEAEDAAFHARVAAGFDAI 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 AR RCH +D++ V I ++ + R Sbjct: 177 ARRDAARCHRIDASGDAGGVQQAIRAVLAPRLAGR 211 >gi|294671092|ref|ZP_06735947.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307200|gb|EFE48443.1| hypothetical protein NEIELOOT_02800 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 207 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 7/204 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ +GI+G+GK+TH+ ++ + +R+ V TREPGGTP E R +LLS G Sbjct: 5 FLTLDGIDGSGKSTHLETMREWFERRGMPVLFTREPGGTPLGEELRRLLLSPD-SRVGLR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR H+E+VI PAL +G ++ DRF D+++AYQG ++ L+ Sbjct: 64 TETLLMFAARRQHLEDVILPALDKGIHVVSDRFTDATFAYQGGGRGIPAADIEVLENWVQ 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P+ T++LD+P+++ +R+ S D FE+++ + R+ +LD A P Sbjct: 124 GSLRPNLTLLLDVPLEVSFERIA------RSREKDRFEQEEAEFFARVRRAYLDRAAAHP 177 Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209 R ++DS S + V + + Sbjct: 178 QRYRVIDSNRSREEVRAAVEAALQ 201 >gi|319762329|ref|YP_004126266.1| thymidylate kinase [Alicycliphilus denitrificans BC] gi|317116890|gb|ADU99378.1| thymidylate kinase [Alicycliphilus denitrificans BC] Length = 218 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 17/208 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GLFI+FEGI+GAGK++HI L R L+ V +TREPGGTP AE R +LL+ D Sbjct: 1 MTTGLFITFEGIDGAGKSSHIETLARALRAAGRSVTLTREPGGTPLAEKLRALLLN---D 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E ++ AAR DH+ VI PAL G+ +LCDRF D+++AYQG L + Sbjct: 58 AMDALTETLLAFAARRDHLCRVIGPALARGEAVLCDRFTDATFAYQGAGRGFDLRVLSYM 117 Query: 121 QEISVQE--------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ + PD T+ D+P ++ L + D FE + V + Sbjct: 118 ERLAQTGIGLGPDLMLEPDLTLWFDVPPEV------AAERLAAARAPDRFEAQPVEFFAR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + + D A P R +D A + V Sbjct: 172 VARGYADRAAGAPRRFARIDGAQPREQV 199 >gi|330431479|gb|AEC16538.1| thymidylate kinase [Gallibacterium anatis UMN179] Length = 210 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 9/213 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE-F 62 FI EG+EGAGKT+ + L+ + TREPGGTP AE R ++ DE Sbjct: 4 KFIVLEGLEGAGKTSARDTVVAVLKELGINEFVFTREPGGTPLAEKLRQLIKQGEGDEVI 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE ++ AAR+ VENVI+PAL +GK ++ DR SS AYQG L +L++ Sbjct: 64 TDKAELLMLYAARVQLVENVIKPALKQGKWVIGDRHDLSSQAYQGGGRGLDINLLMTLKQ 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ LD+ +IGL R ++R LD E++ + ++ RQ +L + Sbjct: 124 AVLGDFTPDLTLYLDVDPEIGLARARSR------GELDRIEQQQIDFFQRTRQRYLQLVE 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +D+ F V + + + Q++ Sbjct: 178 AD-EKSVTIDANLDFPEVNKQLRQAITQWFQRQ 209 >gi|157370153|ref|YP_001478142.1| thymidylate kinase [Serratia proteamaculans 568] gi|166987708|sp|A8GD24|KTHY_SERP5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157321917|gb|ABV41014.1| dTMP kinase [Serratia proteamaculans 568] Length = 212 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 108/217 (49%), Gaps = 10/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M S F+ EG+EGAGKTT + L+ D+ TREPGGTP AE R + Sbjct: 1 MKS-KFVVIEGLEGAGKTTARDTVVDVLREHGINDIAFTREPGGTPLAEKLRDLFKRGVE 59 Query: 60 DEFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E +AE ++ AAR+ VE VI+PAL G ++ DR SS AYQG + Sbjct: 60 GELPTIKAEVLMLYAARVQLVETVIKPALARGAWVVGDRHDLSSQAYQGGGRGVDQQLMA 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ + E PD T+ LDLP +GL+R + R LD E++ + E+ R + Sbjct: 120 SLRDTVLGEFRPDLTLYLDLPPIVGLQRARAR------GELDRIEQEALPFFERTRARYR 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A VD++ S V I V + +Q++ Sbjct: 174 ELAAQDAS-IITVDASQSLDQVTAAIRRCVSQWLQQQ 209 >gi|308234128|ref|ZP_07664865.1| thymidylate kinase [Atopobium vaginae DSM 15829] gi|328943647|ref|ZP_08241112.1| thymidylate kinase [Atopobium vaginae DSM 15829] gi|327491616|gb|EGF23390.1| thymidylate kinase [Atopobium vaginae DSM 15829] Length = 211 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 108/211 (51%), Gaps = 8/211 (3%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ SGLFI+ EG++G GK+T + LL+ + +Y V REPGGT +EA R ++L Sbjct: 1 MSASGLFITLEGVDGCGKSTQVQLLRSCFEEASYKVSCLREPGGTSISEAIRALVLDPAY 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E E +++ AAR V VI+PAL +G+I+LCDR+ DS+YAYQ + Sbjct: 61 TSMSSECELLLYEAARAQLVHEVIKPALAQGRIVLCDRYFDSTYAYQYGGRKLAEDMVLR 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ ++P T +LD+ V R +D E++ + + ++ + Sbjct: 121 ANDLGSCGIVPHKTYVLDVDVACAYARATQ-------TSVDRLEQEGLAFQQDVQKAYKK 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +A QP R ++ + Q V + + + + Sbjct: 174 LACLQPQRVTLISGEGTPQEVFSRLYADIRK 204 >gi|126695487|ref|YP_001090373.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9301] gi|166223098|sp|A3PAJ7|KTHY_PROM0 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|126542530|gb|ABO16772.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9301] Length = 212 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 G FI EGI+G GKTT I L ++L + TREPGG+ + R ++L Sbjct: 2 KGKFIVIEGIDGCGKTTQIDELSKWLPISGLLKKESKLITTREPGGSLLGKKLRRLILDN 61 Query: 58 G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ + AE ++++A R +HV +I PAL ++ DRF DS+ AYQG + Sbjct: 62 NENNKPSSLAELLLYSADRAEHVSKIILPALNNNDWVISDRFSDSTLAYQGYGRNINLEI 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +++ I Q PD T L++ + + R R++ D E + + E+ + Sbjct: 122 IKNIESIVCQGASPDLTFFLEISPEESIFR-------RKNEIPDRIESEGIRFLERVNEG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 F IA+ ++ ++ + ++++ I + Sbjct: 175 FKLIAKQ--KNWKVISASQNIKTISNQIKETL 204 >gi|149197612|ref|ZP_01874662.1| thymidylate kinase [Lentisphaera araneosa HTCC2155] gi|149139182|gb|EDM27585.1| thymidylate kinase [Lentisphaera araneosa HTCC2155] Length = 209 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 8/215 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ FI EG EGAGK+T I L+K L+ + V + REPGGTP AE R V+ S VD Sbjct: 1 MDCSRFIVVEGSEGAGKSTAIKLIKNLLEEQGQTVTLAREPGGTPMAEDLRTVIKSASVD 60 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E A E ++ AAR+ VENVIRPAL G+ L+CDRF S++AYQG + Sbjct: 61 EKVDARTELLIMYAARVQLVENVIRPALERGEWLVCDRFFYSTWAYQGGGRELGLDLIRP 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + +I + ++ P TI +DL ++GL+R + R LD FE + + + R ++ Sbjct: 121 IHDICLADMTPGLTIFMDLDPELGLERARGR------GALDRFELEQIDFFHRTRAMYTQ 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + +D++ S + V ++LN++ +++ Sbjct: 175 LCDERKE-MQKLDASQSLEEVHAHLLNLIRPYIEQ 208 >gi|254462931|ref|ZP_05076347.1| thymidylate kinase [Rhodobacterales bacterium HTCC2083] gi|206679520|gb|EDZ44007.1| thymidylate kinase [Rhodobacteraceae bacterium HTCC2083] Length = 209 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 6/190 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FISFEGI+G+GK+T L L+ ++V +TREPGG+ AE R ++L D + Sbjct: 5 TGRFISFEGIDGSGKSTQAKRLAAALEADGFEVVLTREPGGSAGAEEIRALVLQGEPDRW 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE E ++F AAR DH+E I PAL GK+++CDRF DS+ YQG +D L Sbjct: 65 SAETEILLFTAARRDHMERTILPALAAGKVVICDRFADSTRMYQGLSRGDLRALVDQLHA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++ D+ D+ R R S+ FE + + R FL++A Sbjct: 125 LMIGR-EPDLTLLFDMDPDVSHARAVERDSIDS-----RFENFGASLQKAMRSGFLELAA 178 Query: 183 NQPDRCHIVD 192 P R IV+ Sbjct: 179 AAPKRFRIVN 188 >gi|187251864|ref|YP_001876346.1| thymidylate kinase [Elusimicrobium minutum Pei191] gi|186972024|gb|ACC99009.1| Thymidylate kinase [Elusimicrobium minutum Pei191] Length = 203 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 13/209 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI FEG + GK+T +LL+++L+ Y+V TREPGGTP +E R +LL Sbjct: 3 KFIVFEGPDRGGKSTQANLLRKYLEAAGYNVLQTREPGGTPVSEGIRKILLDPENS-VSP 61 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +++ A+R H E I PAL E KI++C+R+ S+ AYQG ++++ I+ Sbjct: 62 RAELLLYEASRAQHTEEKILPALQEDKIVICERYTMSTCAYQGYGRGFDMDLINTVNNIA 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFLDIAR 182 + PD T + + ++Y L D E + EK RQ + ++ + Sbjct: 122 THGLQPDLTFVF---------LMSDKYFTERGEYLFSDRLELEGNEFREKMRQGYKELVK 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+ ++D+ ++ + + +L + E Sbjct: 173 ITPN-AVLIDADNTVEEIHAKVLGHLKEF 200 >gi|325478730|gb|EGC81841.1| dTMP kinase [Anaerococcus prevotii ACS-065-V-Col13] Length = 209 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 6/213 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I FEG +G+GKT+ ++ +K+ L + + REPGGT +E R +++ ++ Sbjct: 2 RGKLIVFEGPDGSGKTSVLNEVKKILDQDGIEYLTFREPGGTDISEKIRDIIIDNDNEKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A E ++FAA+R +E IRP+L GK +LCDRF+ SS YQG + + + + Sbjct: 62 TARCECLLFAASRAQLIEEEIRPSLEAGKTVLCDRFVLSSLLYQGVGRNLGIEEVKKIND 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + D TI D+ L R + ++ D E ++ H+K + +A Sbjct: 122 FATDNIRADLTIFFDIDYKTALIRKRKNFTA------DRLENENFDFHKKIFDAYKKMAD 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D +D++ S + V + +++E ++ + Sbjct: 176 EYEDEIKKIDASLSIEDVTKQAIQLIYESLEDK 208 >gi|167624300|ref|YP_001674594.1| thymidylate kinase [Shewanella halifaxensis HAW-EB4] gi|167354322|gb|ABZ76935.1| dTMP kinase [Shewanella halifaxensis HAW-EB4] Length = 212 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 115/211 (54%), Gaps = 10/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59 NS FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + Sbjct: 7 NSAKFIVIEGLEGAGKSSAIALVRDFIEKHTGQAPVCTREPGGTPLAEQMRDLVKIANDS 66 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++F AAR V NVI+PAL G+ +L DR SS AYQG + + Sbjct: 67 DPLCDEAECLLFYAARAQLVANVIKPALANGEWVLGDRHNLSSLAYQGGGRGLMP-LVSA 125 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + +++ PD T+ LD+ +GL+R R LD E++++ ++ R FL Sbjct: 126 ISDATLKGFKPDLTLYLDIAPKLGLERAARR------GELDRIEQQEIEFFDRARATFLS 179 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A + D IVD++ S V +I+ I+ E Sbjct: 180 FADSD-DTIKIVDASQSMAQVHKDIIAILQE 209 >gi|255327688|ref|ZP_05368754.1| dTMP kinase [Rothia mucilaginosa ATCC 25296] gi|255295362|gb|EET74713.1| dTMP kinase [Rothia mucilaginosa ATCC 25296] Length = 238 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 7/224 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI EG +GAGKTT ++LL L+ + Y V TREPGGT E R ++L G Sbjct: 20 RRGLFIVVEGGDGAGKTTQLALLDEALRGRGYRVITTREPGGTEIGEKLRALVLEAGQGT 79 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAA+R H +IRPAL EG I+L DR++DSS AYQG + L Sbjct: 80 IDDRTEALIFAASRAAHASQLIRPALAEGAIVLSDRYIDSSAAYQGVGRDLGVETIVDLS 139 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++PD T++L +P+ +R+ R +D E + + F IA Sbjct: 140 RWATANLVPDATLLLSVPLSAEQERMDQR------GTVDRIEAEGTAFKARIHGAFEQIA 193 Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 R + I+D + + V +L ++ L+ R + K+D Sbjct: 194 REDANGSHRIIDGVGTIEQVHARVLEVIEPLLALRELVRTGKED 237 >gi|78778518|ref|YP_396630.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312] gi|123554778|sp|Q31D51|KTHY_PROM9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78712017|gb|ABB49194.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9312] Length = 212 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 G FI EGI+G GKTT I+ L ++L + K + TREPGG+ + R ++L Sbjct: 2 KGKFIVIEGIDGCGKTTQINELSKWLPKSGLIKKGSKLITTREPGGSLLGKKLRGLILDN 61 Query: 58 G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ + AE ++++A R +H+ +I PAL ++ DRF DS+ AYQG Sbjct: 62 NKTNKPSSLAELLLYSADRAEHISKIISPALNNNDWVISDRFSDSTLAYQGYGRKINLEI 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + ++ I Q PD T L++ + + R R++ D E + + EK + Sbjct: 122 IKKVESIVCQGEYPDLTFFLEISPEESIMR-------RKNEIPDRIESEGIRFLEKVNEG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 F IAR + ++ ++ + ++++ I + Sbjct: 175 FKLIARE--KKWKVISASQNIKTISNQIKETL 204 >gi|303325943|ref|ZP_07356386.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3] gi|302863859|gb|EFL86790.1| dTMP kinase [Desulfovibrio sp. 3_1_syn3] Length = 217 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 21/222 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEGIEG+GK+T LL LQ YD +TREPGG + R +LL + Sbjct: 1 MFISFEGIEGSGKSTAQRLLAEHLQGLGYDPLLTREPGGCALGRSLRPILLDARTRGLSS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R HV VIRPAL G+ +LCDR+ DS+ AYQG L + +++ Sbjct: 61 RAELYLFLADRAQHVAEVIRPALEAGQTVLCDRYADSTLAYQGYGRGLDPEHLRRINDMA 120 Query: 125 VQE----------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173 + V GL+R R + + F+ + + HE+ Sbjct: 121 TGGLMPDLTLLLDLP----------VHCGLERAGLRNREEGTVLSEGRFDAESLEFHERV 170 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 RQ + +A +P+R I+D+A + V L+ V +++R Sbjct: 171 RQGYRSLAAEEPERFAIIDAAQPPEDVVLQCLSAVEASLRQR 212 >gi|117920213|ref|YP_869405.1| thymidylate kinase [Shewanella sp. ANA-3] gi|166223117|sp|A0KW30|KTHY_SHESA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|117612545|gb|ABK47999.1| thymidylate kinase [Shewanella sp. ANA-3] Length = 209 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 10/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + D Sbjct: 7 KFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSDPL 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E+E ++ AAR V NVI+PAL EGK +L DR SS AYQG ++++ Sbjct: 67 CDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ PD T+ LDL +GL R R LD E++ + E+ R +L +A Sbjct: 126 ATLKGFKPDLTLYLDLDPKLGLLRAAKR------GELDRIEQQAIDFFERARATYLKLAS 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 +R ++D++ + V +IL ++ Sbjct: 180 ED-ERIVVIDASQTMAEVHKDILAVLQ 205 >gi|126174672|ref|YP_001050821.1| thymidylate kinase [Shewanella baltica OS155] gi|125997877|gb|ABN61952.1| thymidylate kinase [Shewanella baltica OS155] Length = 208 Score = 225 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 10/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + D Sbjct: 6 KFIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPL 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++ AAR V NVI+PAL +G+ +L DR SS AYQG ++++ Sbjct: 66 CDEAECLLIYAARAQLVANVIKPALAKGQWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ PD T+ LDL +GL R R LD E++ + E+ R +L +A Sbjct: 125 ATLKGFKPDLTLYLDLDPKLGLTRAAKR------GELDRIEQQAIDFFERARATYLKLAS 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 D ++D++ + V +IL ++ Sbjct: 179 ED-DSIVVIDASQTMAEVHKDILAVLQ 204 >gi|24374155|ref|NP_718198.1| thymidylate kinase [Shewanella oneidensis MR-1] gi|46576581|sp|Q8EDX8|KTHY_SHEON RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|24348659|gb|AAN55642.1|AE015703_4 thymidylate kinase [Shewanella oneidensis MR-1] Length = 209 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 112/209 (53%), Gaps = 10/209 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ I+L++ F+++ + TREPGGTP AE R ++ + D Sbjct: 7 KFIVVEGLEGAGKSSAIALIRDFIEKHTGHAPVCTREPGGTPLAERIRDLVKIADPSDPL 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E+E ++ AAR V NVI+PAL +G +L DR SS AYQG ++++ Sbjct: 67 CDESECLLIYAARAQLVANVIKPALAQGNWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ PD T+ LDL +GL+R R LD E++ + E+ R +L +A Sbjct: 126 ATLKGFKPDLTLYLDLDPKLGLQRAAKR------GELDRIEQQAIDFFERARATYLKLAS 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + ++D++ + V +IL ++ + Sbjct: 180 ED-ECIVVIDASQTMAEVHKDILAVLQAM 207 >gi|27904814|ref|NP_777940.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|27904212|gb|AAO27045.1| thymidylate kinase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 217 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLL-SCG 58 M G FI EGIEG+GKTT LK L V R+PG TP AE R +L+ Sbjct: 6 MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 65 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E E ++F AAR+ ++N+I+PAL +G ++ DR+ SS AYQ + + Sbjct: 66 NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 125 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 LQ + ++ P+ T LD+ +IGL R++NR +D E+ R +L Sbjct: 126 LLQSLFLKNFNPNITFYLDVTPEIGLNRIKNR------NEIDRIEQNTKFFFNNVRNKYL 179 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ + +P +++ V + + + Sbjct: 180 NLIKTKPG-IIKINANRKIDKVKHSCKQQMLSWLN 213 >gi|328955029|ref|YP_004372362.1| thymidylate kinase [Coriobacterium glomerans PW2] gi|328455353|gb|AEB06547.1| thymidylate kinase [Coriobacterium glomerans PW2] Length = 242 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 10/207 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EGI+G GK+T LL L+ Y+V + REPGG +E R +LL E A Sbjct: 26 FITLEGIDGCGKSTQARLLAATLEHAGYEVELLREPGGAAISEKIRQLLLDPANAEMSAT 85 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +++ AAR V +I PAL G++++CDRF DS+ +YQ +D+ ++V Sbjct: 86 CELMLYEAARAQLVHQLIVPALQTGRVVVCDRFYDSTTSYQSFGSGIDRATVDTANGLAV 145 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P TI+ D+ D+ +R+ R D E K ++ + F IA +P Sbjct: 146 GAIRPLITIVCDIAPDLAAERMPGRAR-------DRMEAKGAAFQQRAAEGFRAIAAEEP 198 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212 +R ++D++ + VA +L V EL+ Sbjct: 199 ERVRLIDAS---EDVAHVLLRSVAELI 222 >gi|184201527|ref|YP_001855734.1| thymidylate kinase [Kocuria rhizophila DC2201] gi|183581757|dbj|BAG30228.1| thymidylate kinase [Kocuria rhizophila DC2201] Length = 218 Score = 224 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 5/199 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG +GAGK+T +S L + L+ + V TREPGGTP AE+ R ++L Sbjct: 5 TRGALIVFEGGDGAGKSTQVSALVQALRAGGHTVTCTREPGGTPLAESVRALVLDPAHAP 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FA+AR DHV +IRPA+ G+I++CDRF+DSS AYQG + L Sbjct: 65 VAPATEALLFASARADHVARLIRPAVERGEIVVCDRFVDSSVAYQGAGRGLGLARVADLN 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++Q ++PD T++LD+ R + D E +D+ H F ++A Sbjct: 125 QWALQGLVPDLTVLLDVDQT-----TAQARRRRRGSASDRMEAEDLAFHATVNAAFRELA 179 Query: 182 RNQPDRCHIVDSAHSFQSV 200 P R ++D+A S + + Sbjct: 180 AAAPQRYLVLDAAESAERI 198 >gi|29611727|sp|P59500|KTHY_BUCBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 212 Score = 224 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLL-SCG 58 M G FI EGIEG+GKTT LK L V R+PG TP AE R +L+ Sbjct: 1 MLKGKFIVIEGIEGSGKTTICKTLKNILYEHGIKNVICVRDPGSTPLAEKIRSLLITKDK 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E E ++F AAR+ ++N+I+PAL +G ++ DR+ SS AYQ + + Sbjct: 61 NEYMVNETELLLFYAARIQLIKNIIQPALNKGVWVISDRYFLSSLAYQCAGRKIKEEIVL 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 LQ + ++ P+ T LD+ +IGL R++NR +D E+ R +L Sbjct: 121 LLQSLFLKNFNPNITFYLDVTPEIGLNRIKNR------NEIDRIEQNTKFFFNNVRNKYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ + +P +++ V + + + Sbjct: 175 NLIKTKPG-IIKINANRKIDKVKHSCKQQMLSWLN 208 >gi|85057772|ref|YP_456688.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|123518128|sp|Q2NIY4|KTHY_AYWBP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|84789877|gb|ABC65609.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 207 Score = 224 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 117/210 (55%), Gaps = 7/210 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKTTH S L L +K Y +T+EPGG E R++LL + Sbjct: 1 MFISFEGCEGTGKTTHSSYLFEKLSKK-YSCVLTKEPGGGLFNEVIRNILLHSYNKQIDF 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++FAA R +H+ +I PAL + KI++CDR+LDS+ AYQ F+ ++ ++ Sbjct: 60 HTEALLFAADRAEHLSKLIIPALQQNKIVICDRYLDSTIAYQVYARGLSKDFVLNINNLA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + MP+ T LDL IG++RV+ ++ F+ + + H+K R+ +LD+ + Sbjct: 120 LN-YMPNITFYLDLDPKIGIQRVKQ----FRPKEINSFDLQKLSFHKKVRKGYLDLYQKD 174 Query: 185 PD-RCHIVDSAHSFQSVATNILNIVWELVQ 213 R ++D++ S + + I + E+ Q Sbjct: 175 QQKRIFLIDASKSLEKIYNIIEQKLKEVFQ 204 >gi|256827342|ref|YP_003151301.1| thymidylate kinase [Cryptobacterium curtum DSM 15641] gi|256583485|gb|ACU94619.1| thymidylate kinase [Cryptobacterium curtum DSM 15641] Length = 295 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 78/211 (36%), Positives = 110/211 (52%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+FEG +GAGK+THI L R L++ Y V REPGGT A EA R V+L + Sbjct: 57 SRGAFITFEGGDGAGKSTHIKFLARALEQCGYSVVRLREPGGTQAGEALRQVVLDPSYEG 116 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE+E +++ AAR V+ VI PAL GKI+LCDRF DS+ AYQ F+ Sbjct: 117 LSAESELLIYEAARAQLVKEVIAPALAAGKIVLCDRFCDSTIAYQAYGRGLSRDFVQEAN 176 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + Q + PD T+++ P R Q + R D E V H + R+ F IA Sbjct: 177 LFACQGIKPDRTVLIKAPTS---ARKQLERATRAQG-PDRIELAGVEFHTRVREAFDAIA 232 Query: 182 RNQPDRC-HIVDSAHSFQS---VATNILNIV 208 + PDR +V ++ ++ V + + V Sbjct: 233 ASDPDRVRVVVSASRKSETARLVFAAVADCV 263 >gi|89070236|ref|ZP_01157560.1| thymidylate kinase [Oceanicola granulosus HTCC2516] gi|89044156|gb|EAR50314.1| thymidylate kinase [Oceanicola granulosus HTCC2516] Length = 202 Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats. Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 10/196 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEGI+G+GK+T LL L D +TREPGG+ AE R ++L+ Sbjct: 1 MAPGRFITFEGIDGSGKSTQARLLAERLP----DALLTREPGGSAGAEEIRALVLNGDPG 56 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AE E ++F AAR DH+E I PAL G+ ++CDRF DS+ YQG +D L Sbjct: 57 RWSAETELLLFTAARRDHLEKTIEPALAAGRTVICDRFADSTRVYQGATRGDLRATVDKL 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ PD T I+D+ + L R R FE + + E R FL + Sbjct: 117 HALTI-GREPDLTFIIDMDPETALARGVARPGAER-----RFEDFGLALQETVRHGFLSL 170 Query: 181 ARNQPDRCHIVDSAHS 196 AR +RC ++D Sbjct: 171 ARQFSERCIVIDGDRP 186 >gi|148651943|ref|YP_001279036.1| dTMP kinase [Psychrobacter sp. PRwf-1] gi|226732663|sp|A5WBP5|KTHY_PSYWF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148571027|gb|ABQ93086.1| thymidylate kinase [Psychrobacter sp. PRwf-1] Length = 208 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 10/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G F+SFEG EG GKTT I+ L LQ + + TREPGG+P AE R +LL Sbjct: 1 MSLGKFVSFEGTEGVGKTTAINGLCERLQAQGIEYVRTREPGGSPFAEQLRELLLDTRT- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119 + + E ++ AAR DH+ VI PAL GK ++CDRF+DS+ AYQG L Sbjct: 60 QINDDTELLLMFAARSDHLAQVIMPALSAGKWVICDRFIDSTVAYQGYGRGFGNADMLHK 119 Query: 120 LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ + V +PD T+ LDLPV G++R R + D FE++ + ++ Q F Sbjct: 120 IEALIAGFVPRLPDITLWLDLPVAEGMQRAGKR------SVADRFEQQQLDFFDRVYQGF 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + QP R +D+ + VA I V + + Sbjct: 174 EAQQQAQPQRIQRIDAQGEVEQVADRIWQSVSQQL 208 >gi|157363328|ref|YP_001470095.1| dTMP kinase [Thermotoga lettingae TMO] gi|157313932|gb|ABV33031.1| dTMP kinase [Thermotoga lettingae TMO] Length = 202 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 11/207 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ISFEGI+G+GK T + L +L+ KN REPGGT E R ++L + Sbjct: 1 MLISFEGIDGSGKGTQLRLFLSYLKNKNLPYIHVREPGGTELGEILREIVLKGQF-QIYP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A+R V +I PAL E K+++ DRF+DSS YQG ++ L + + Sbjct: 60 KAELLLFLASRAQLVSQIILPALKENKVVVADRFIDSSVVYQGVGRELGPELVEKLNDFA 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T +D+PV+ LKR + D E + + +K R+ +L++AR + Sbjct: 120 TDGLKPDLTFYIDVPVETALKRKR---------IFDRIESEGIEFLKKVRKAYLELARKE 170 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 R +++ + + + + I+ I +L Sbjct: 171 K-RIFLMNGEKAIEEIHSEIILIFEQL 196 >gi|113970001|ref|YP_733794.1| thymidylate kinase [Shewanella sp. MR-4] gi|114047236|ref|YP_737786.1| thymidylate kinase [Shewanella sp. MR-7] gi|123325106|sp|Q0HJN0|KTHY_SHESM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123326608|sp|Q0HVX6|KTHY_SHESR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|113884685|gb|ABI38737.1| thymidylate kinase [Shewanella sp. MR-4] gi|113888678|gb|ABI42729.1| thymidylate kinase [Shewanella sp. MR-7] Length = 209 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 10/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + D Sbjct: 7 KFIVVEGLEGAGKSSAIALIRDFIEKHTGLAPVCTREPGGTPLAERIRDLVKIADPSDPL 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E+E ++ AAR V NVI+PAL EGK +L DR SS AYQG ++++ Sbjct: 67 CDESECLLIYAARAQLVANVIKPALAEGKWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSN 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ PD T+ LDL +GL+R R LD E++ + E+ R +L +A Sbjct: 126 ATLKGFKPDLTLYLDLDPKLGLQRAAKR------GELDRIEQQAIDFFERARATYLKLAS 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 ++ ++D++ + V +IL ++ Sbjct: 180 ED-EQIVVIDASQTMAEVHKDILAVLQ 205 >gi|312128360|ref|YP_003993234.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] gi|311778379|gb|ADQ07865.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] Length = 210 Score = 224 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 111/215 (51%), Gaps = 8/215 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GK+T I ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKSTQIVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 60 KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D+ H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------MAGKNDRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +RC +++ S + V + + L + + Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVCREIERLFESK 207 >gi|153000971|ref|YP_001366652.1| thymidylate kinase [Shewanella baltica OS185] gi|160875684|ref|YP_001555000.1| thymidylate kinase [Shewanella baltica OS195] gi|217973069|ref|YP_002357820.1| thymidylate kinase [Shewanella baltica OS223] gi|304409049|ref|ZP_07390670.1| thymidylate kinase [Shewanella baltica OS183] gi|307303052|ref|ZP_07582807.1| thymidylate kinase [Shewanella baltica BA175] gi|151365589|gb|ABS08589.1| dTMP kinase [Shewanella baltica OS185] gi|160861206|gb|ABX49740.1| dTMP kinase [Shewanella baltica OS195] gi|217498204|gb|ACK46397.1| dTMP kinase [Shewanella baltica OS223] gi|304352870|gb|EFM17267.1| thymidylate kinase [Shewanella baltica OS183] gi|306913412|gb|EFN43834.1| thymidylate kinase [Shewanella baltica BA175] gi|315267873|gb|ADT94726.1| thymidylate kinase [Shewanella baltica OS678] Length = 208 Score = 224 bits (572), Expect = 8e-57, Method: Composition-based stats. Identities = 69/207 (33%), Positives = 110/207 (53%), Gaps = 10/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + D Sbjct: 6 KFIVIEGLEGAGKSSAINLIRDFIEKHTGKAPICTREPGGTPLAERIRDLVKIADATDPL 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++ AAR V NVI+PAL +G+ +L DR SS AYQG ++++ Sbjct: 66 CDEAECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMP-LVEAVST 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ PD T+ LDL +GL R R LD E++ + E+ R +L +A Sbjct: 125 ATLKGFKPDLTLYLDLDPKLGLTRAAKR------GELDRIEQQAIDFFERARATYLKLAS 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 D ++D++ + V +IL ++ Sbjct: 179 ED-DSIVVIDASQTMAEVHKDILAVLQ 204 >gi|254230304|ref|ZP_04923692.1| thymidylate kinase [Vibrio sp. Ex25] gi|151937164|gb|EDN56034.1| thymidylate kinase [Vibrio sp. Ex25] Length = 210 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGK+T I + L+ + + TREPGGTP AE R ++ Sbjct: 1 MMKANFIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + Sbjct: 61 GEELKDMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMK 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 121 NLRDTTLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +IA P I+++ + + V+ +I + + E + ++ Sbjct: 175 EIAHADPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 210 >gi|257790898|ref|YP_003181504.1| thymidylate kinase [Eggerthella lenta DSM 2243] gi|317488389|ref|ZP_07946944.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA] gi|325830525|ref|ZP_08163978.1| dTMP kinase [Eggerthella sp. HGA1] gi|257474795|gb|ACV55115.1| thymidylate kinase [Eggerthella lenta DSM 2243] gi|316912509|gb|EFV34063.1| thymidylate kinase [Eggerthella sp. 1_3_56FAA] gi|325487434|gb|EGC89875.1| dTMP kinase [Eggerthella sp. HGA1] Length = 244 Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 109/211 (51%), Gaps = 12/211 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+FI+FEG EGAGKTTHI L L+ +V REPGGT E R V+L Sbjct: 13 RGIFITFEGGEGAGKTTHIRFLSETLRAHGREVLCLREPGGTEVGEQLRAVVLDPANGGM 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE +++ AAR + VI PAL G ++LCDRF DS+ AYQ +F+D + E Sbjct: 73 SDEAELLIYEAARAQLMAQVIAPALARGAVVLCDRFTDSTVAYQAYGRGLPRMFVDRVNE 132 Query: 123 ISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q V PD TI++ ++GL R +R D E+ H + + FL+I Sbjct: 133 FACQGVHPDRTILMATGGEANVGLVRATHR------GAADRLEQAGEEFHARVNEAFLEI 186 Query: 181 ARNQPDRCHIV--DS--AHSFQSVATNILNI 207 AR P+R +V D + + +V + ++ Sbjct: 187 ARRDPERVRVVVSDGNKSQTAAAVFAELADL 217 >gi|254499174|ref|ZP_05111855.1| thymidylate kinase [Legionella drancourtii LLAP12] gi|254351608|gb|EET10462.1| thymidylate kinase [Legionella drancourtii LLAP12] Length = 212 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 8/214 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G I EG+EGAGK+T +S + +L R TREPGGT E R ++ Sbjct: 5 TGKLIVIEGLEGAGKSTAVSTVIDYLTRLEIKTITTREPGGTVIGELLRQIIKGTEYKGV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++E ++ AR+ +E VI+PAL +G ++ DRF S+ AYQG + L Sbjct: 65 LDDKSELLLLYTARIQLLEQVIKPALQQGTWVIADRFELSTMAYQGGGRGLNEQMIQQLS 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ PD T+ LD+ + G+KRV++R D E++ + + ++ Sbjct: 125 AFALDGFKPDLTLYLDISPEEGMKRVKSR------GEFDRIEQQSIDFFHRVHSSYIHHV 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R P+ ++D+ V I ++ E ++ + Sbjct: 179 RTNPN-AVLIDAGLPLHEVQLAIQCVLKEFIEHK 211 >gi|260767879|ref|ZP_05876813.1| thymidylate kinase [Vibrio furnissii CIP 102972] gi|260615909|gb|EEX41094.1| thymidylate kinase [Vibrio furnissii CIP 102972] Length = 209 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 10/216 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 MNS +I EG+EGAGK+T I + L D+ TREPGGT AE R ++ Sbjct: 1 MNS-KYIVVEGLEGAGKSTAIQAVVETLHAHGIQDITRTREPGGTVLAEKMRALVKEEHE 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E E ++ AAR+ VENVI+PAL + ++ DR SS AYQG + Sbjct: 60 GEVLQDMTELLLMYAARVQLVENVIKPALQQRHWVVGDRHDMSSQAYQGGGRQIARETMQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 SL++ ++ PD T+ LD+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 120 SLKQTTLGAFKPDFTLYLDIDPKVGLERARGR------GELDRIEKMDISFFERTRERYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++A + +++ S + V +I + + + Sbjct: 174 ELAAGD-ESVVTINAEQSIEQVTHDIKQALESWLNR 208 >gi|317407094|gb|EFV87102.1| tmk protein [Achromobacter xylosoxidans C54] Length = 207 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 113/214 (52%), Gaps = 10/214 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI+ EG++GAGK+TH + FL+ + +V TREPGGTP E R ++L D Sbjct: 3 SRGRFITLEGVDGAGKSTHTEWIAEFLRGQGLEVVSTREPGGTPLGEKLRALVL---TDP 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + E ++ AAR +H+ VI PAL G ++CDR+ D++YAYQG + +L+ Sbjct: 60 MGLDTETLLMFAARCEHLHQVIEPALARGAWVVCDRYTDATYAYQGGGRGLGAERVAALE 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD T + D+P+++ R+ ++ D FER+ E+ R + A Sbjct: 120 TWMQAG-RPDRTWLFDVPLEVARARLA------DAREPDRFEREGAAFFERTRAAYQARA 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +PDR ++DS + ++ + + ELV R Sbjct: 173 AAEPDRIRVIDSTRAIAAIRAELEAGLRELVAVR 206 >gi|295698602|ref|YP_003603257.1| thymidylate kinase [Candidatus Riesia pediculicola USDA] gi|291157415|gb|ADD79860.1| thymidylate kinase [Candidatus Riesia pediculicola USDA] Length = 217 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 118/212 (55%), Gaps = 6/212 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEF 62 G +I EG+EG+GKTT I +K+ L ++ +D+ REPGGTP +E R ++ ++F Sbjct: 8 GRYIVVEGLEGSGKTTMIGFVKKMLIKEGFDILTVREPGGTPISEKIRKLIKKNFPEEKF 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +F AAR+ +EN+I P L GK ++ DR SSYAYQG + + +D + + Sbjct: 68 LVKTELFMFYAARIQLMENIILPNLKSGKWVIGDRNFLSSYAYQGGKYGVKDDEIDKINK 127 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I++ + PD I LD+ +IG+ R+ R S + LD E++ + + R +L+I + Sbjct: 128 IAIGKFQPDLIIYLDVFPEIGISRIHERKSSK----LDRIEKRSLDFFHQVRNRYLNIIK 183 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 NQ + I+D+ SV + + +++ Sbjct: 184 NQKE-FMIIDANQDLSSVKRLFQHKICRWMKR 214 >gi|258542239|ref|YP_003187672.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01] gi|256633317|dbj|BAH99292.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01] gi|256636376|dbj|BAI02345.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-03] gi|256639429|dbj|BAI05391.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-07] gi|256642485|dbj|BAI08440.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-22] gi|256645540|dbj|BAI11488.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-26] gi|256648593|dbj|BAI14534.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-32] gi|256651646|dbj|BAI17580.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654637|dbj|BAI20564.1| thymidylate kinase [Acetobacter pasteurianus IFO 3283-12] Length = 214 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EG GK+T + LLK L+ + V TREPGG+ AE R +LL Sbjct: 1 MACGMFITLEGAEGVGKSTQLRLLKENLEAQGQKVLTTREPGGSAGAEDLRQLLLFGKN- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A AE + AAR DHV+ VI PAL G+I+LCDRF DS+ AYQG ++ + SL Sbjct: 60 PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTMAYQGYGRANGDPAILSL 119 Query: 121 QEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E + + PD T +L P I +R+ R A D +E+ D H + F Sbjct: 120 IETLQKQLGLQPDVTFLLQAPRAISRQRLAAR-----GAPTDRYEQADEDFHARLADGFA 174 Query: 179 DIARNQPDRCHIVDSAH-SFQSVATNILNIVWELV 212 IA+ +P R +VD++ S + V IL + + Sbjct: 175 HIAKAEPQRVVVVDTSVYSAEQVNAQILKDIQTRL 209 >gi|124515019|gb|EAY56530.1| Thymidylate kinase [Leptospirillum rubarum] Length = 220 Score = 223 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 6/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ I+FEGI+G+GK+T + L V ++REPG TP E R +LLS V Sbjct: 6 TGILITFEGIDGSGKSTQAREIHNALSLAGLKVRLSREPGATPLGEEIRKILLSDSV-PV 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AE ++F A R HV++V+RP+ G+ILL DRF D++ AYQG +++L + Sbjct: 65 GNLAELLLFLADRAQHVQDVLRPSRSSGEILLVDRFTDATTAYQGYGMGHPLPLIETLHK 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +Q++ P T +LD+ +R++ R + + E + + K R +L++A+ Sbjct: 125 TILQDIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFRKVRNGYLELAK 179 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D+ + + +IL + + Sbjct: 180 QNPHRFCVLDATLPREELTRSILKDLEPRL 209 >gi|149911598|ref|ZP_01900210.1| thymidylate kinase [Moritella sp. PE36] gi|149805319|gb|EDM65332.1| thymidylate kinase [Moritella sp. PE36] Length = 214 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 110/206 (53%), Gaps = 9/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE-F 62 F+ EG+EGAGK+T +S + +L + DV TREPGGT AE R ++ +E Sbjct: 4 KFLVIEGLEGAGKSTAVSTVINWLAEQGITDVITTREPGGTKLAEKMRAIVKDVDTEEPL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE ++ AAR VE+VI+PAL +G+ ++ DR SS AYQG L++L++ Sbjct: 64 TESAELMLMYAARAQLVEHVIKPALAKGQWVVGDRHDLSSIAYQGGGRGFDIGVLNTLRQ 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ + PD T++LD+ +GL+R + R LD E + + E+ + ++A Sbjct: 124 VAIGDFKPDMTLLLDIDPAVGLQRAKVR------GELDRIELEQLSFFERIGAKYQELAA 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 D + VD+ +V I +++ Sbjct: 178 AD-DTIYSVDAGQDIDNVQAQIRDVL 202 >gi|32490843|ref|NP_871097.1| hypothetical protein WGLp094 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|31340185|sp|Q8D3A7|KTHY_WIGBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|25166049|dbj|BAC24240.1| tmk [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 234 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 20/235 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58 M FI EG+EG+GKT IS + L ++ V TREPGGTP AE+ R ++ G Sbjct: 1 MIKSKFIVIEGLEGSGKTNAISKIVNLLNKQGIKNVIFTREPGGTPLAESLRTLIKEGVG 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ AE ++ AAR+ VE+VI+PAL G ++ DR SS AYQG L Sbjct: 61 YEKITDNAELLMIYAARIQLVESVIKPALENGSWVVGDRHDLSSLAYQGGGRKIDTKILK 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-----------------SACLDY 161 L+E+ +++ PD T LD+P +GL R++ R ++R LD Sbjct: 121 MLREVFLRDFYPDLTFYLDIPPIMGLARIRARATVRAQIRDKVNKIKRNHSHDIKNALDR 180 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 E + + ++ R+ + ++A ++ +D++ S + V I + + + ++K++ Sbjct: 181 IEVEPISFFDRTRKKYKELASKN-EKIITIDASKSLELVNKEIKHQLLKWLKKQI 234 >gi|300744314|ref|ZP_07073333.1| dTMP kinase [Rothia dentocariosa M567] gi|300380039|gb|EFJ76603.1| dTMP kinase [Rothia dentocariosa M567] Length = 249 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 83/215 (38%), Positives = 118/215 (54%), Gaps = 7/215 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI FEG +GAGKTT ++ L+ L+ + Y V TREPGGTP EA R ++L G E Sbjct: 18 RRGLFIVFEGGDGAGKTTQLARLQAALEAQGYTVIATREPGGTPLGEALRELVLKHGSSE 77 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A AEA++FAA+R H IRPAL G ++L DR+LDSS AYQG + + L Sbjct: 78 VDARAEALIFAASRAAHAAQKIRPALAAGAVVLSDRYLDSSAAYQGIGRNLGKDTITDLS 137 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++++P TI+LD+P+ +R+ +R +D E + F DIA Sbjct: 138 RWATEDLIPHATILLDVPLTDESQRMSDR------GTVDRIEAEGADFKACVHTAFADIA 191 Query: 182 RNQPDRCH-IVDSAHSFQSVATNILNIVWELVQKR 215 R D H +VD S +V +L +V L++ R Sbjct: 192 RQNADGAHYVVDGCGSVDAVHERVLEVVRPLLKSR 226 >gi|319941084|ref|ZP_08015420.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B] gi|319805441|gb|EFW02243.1| thymidylate kinase [Sutterella wadsworthensis 3_1_45B] Length = 203 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 106/209 (50%), Gaps = 8/209 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EGI+GAGK+T L + L + V TREPGGTP AE R +LL DE Sbjct: 3 GRFITIEGIDGAGKSTQTESLLKHLADQGVSVLHTREPGGTPLAEKIRAMLL---ADEMA 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +AE ++F AAR DHV VIRP L G+ +L DRF D++YAYQ +++L+ Sbjct: 60 PDAETLLFFAARADHVRRVIRPTLESGRWVLSDRFTDATYAYQVGGKGFSGEKVEALENW 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD T++ D+ V + D FER + R+ +L A Sbjct: 120 TLGGFAPDLTLLFDIAPA-----VAAARLRARAGDQDRFERMGEAFFTRVREAYLARAAA 174 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R I+D+ + V+ +I + + Sbjct: 175 APERFLIIDADRPAKDVSADIFARISSWL 203 >gi|189347011|ref|YP_001943540.1| dTMP kinase [Chlorobium limicola DSM 245] gi|238692153|sp|B3EDD6|KTHY_CHLL2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189341158|gb|ACD90561.1| dTMP kinase [Chlorobium limicola DSM 245] Length = 219 Score = 222 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 4/209 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L++ L + D REPGGT AE R +LL + Sbjct: 1 MLITFEGIDGAGKSTQIRKLQKLLIGAHIDSITLREPGGTEVAEKIRQILLESRHE-ISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A+R + V+ VI PA+ G ++ DRF DS+ AYQG + L ++ +S Sbjct: 60 IGELLLFSASRAELVQQVILPAIDNGTTVILDRFFDSTIAYQGYGREIDQVMLQTIITLS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T LD+ + L R + SL + + LD ER + K RQ +LDI Sbjct: 120 TFSLQPDITFYLDISPENALMRKFSEKSLPIAFDESELDRMERSGLDFFRKVRQGYLDII 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 R ++D+ Q + I+ + E Sbjct: 180 HKNERRFVLLDALDDPQMIHKRIIASLKE 208 >gi|329113408|ref|ZP_08242189.1| Thymidylate kinase [Acetobacter pomorum DM001] gi|326697233|gb|EGE48893.1| Thymidylate kinase [Acetobacter pomorum DM001] Length = 215 Score = 222 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 80/215 (37%), Positives = 113/215 (52%), Gaps = 9/215 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI+ EG EG GK+T + LLK L+ + V TREPGG+ AE R +LL Sbjct: 2 MACGMFITLEGAEGVGKSTQLRLLKEKLEAQGQKVLATREPGGSAGAEDLRQLLLFGKN- 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A AE + AAR DHV+ VI PAL G+I+LCDRF DS+ AYQG ++ + SL Sbjct: 61 PLSARAEILTHFAARYDHVDQVILPALKAGQIVLCDRFTDSTLAYQGYGRANGDPAILSL 120 Query: 121 QEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 I + + PD T +L P + +R+ R A D +E+ D H + F Sbjct: 121 IAILQKQLGLQPDITFLLQAPRAVSRQRLAAR-----GAPTDRYEQADEAFHARLADGFA 175 Query: 179 DIARNQPDRCHIVDSAH-SFQSVATNILNIVWELV 212 IA+ +P R +VD++ S + V IL + + Sbjct: 176 HIAQAEPQRVVVVDTSVYSAEQVNAQILKDIQTRL 210 >gi|312877610|ref|ZP_07737568.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A] gi|311795620|gb|EFR11991.1| thymidylate kinase [Caldicellulosiruptor lactoaceticus 6A] Length = 207 Score = 222 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 8/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 60 KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D+ H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------IAGKTDRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ +RC +++ S + V +L + L+ Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLYEIERLL 204 >gi|156975176|ref|YP_001446083.1| thymidylate kinase [Vibrio harveyi ATCC BAA-1116] gi|166223128|sp|A7MVG2|KTHY_VIBHB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|156526770|gb|ABU71856.1| hypothetical protein VIBHAR_02903 [Vibrio harveyi ATCC BAA-1116] Length = 210 Score = 222 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGK+T I + L+ + + TREPGGTP AE R ++ Sbjct: 1 MMKANFIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRGLVKEEHE 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E ++ AAR+ VENVI+PAL + ++ DR SS AYQG + Sbjct: 61 GEDLKDMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMK 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ E P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L Sbjct: 121 NLRDTTLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A D I+++ S + VA +I + + + + Sbjct: 175 ELANAD-DSIVIINAEQSIEDVAQDIKAALNKWLAAQ 210 >gi|262393774|ref|YP_003285628.1| thymidylate kinase [Vibrio sp. Ex25] gi|262337368|gb|ACY51163.1| thymidylate kinase [Vibrio sp. Ex25] Length = 209 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 FI EG+EGAGK+T I + L+ + + TREPGGTP AE R ++ +E Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEELK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL G+ ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANGQWVVGDRHDMSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L+IA Sbjct: 125 TLGDFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLEIAHA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P I+++ + + V+ +I + + E + ++ Sbjct: 179 DPS-VIIINAEQAIEGVSRDIRDALNEWLARQ 209 >gi|206603846|gb|EDZ40326.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG'] Length = 220 Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 117/212 (55%), Gaps = 9/212 (4%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN+ G+ I+FEGI+G+GK+T + L +V ++REPG TP E R++LLS Sbjct: 1 MNNPATGILITFEGIDGSGKSTQARDIHNALSLAGLNVRLSREPGATPLGEEIRNILLSD 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 V G AE +F A R +HV++V+RP+ G++LL DRF+D++ AYQG + Sbjct: 61 KV-PVGNLAELFLFLADRAEHVQDVLRPSRSNGEVLLVDRFIDATTAYQGYGMGHPLSLI 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++L + +QE+ P T +LD+ +R++ R + + E + + +K R + Sbjct: 120 ENLHKTILQEIEPFRTFLLDIDPLAASERIRKRGEKK-----NRIEERGLEFFQKVRNGY 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 L+IA+ P R ++D+ + + ILN + Sbjct: 175 LEIAKQNPHRFRVLDATLPREELNRAILNDLE 206 >gi|312793986|ref|YP_004026909.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181126|gb|ADQ41296.1| thymidylate kinase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 207 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 8/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 60 KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------IAGKTDRLDLEDFEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ +RC +++ S + V +L + L+ Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLYEIERLL 204 >gi|221195667|ref|ZP_03568721.1| thymidylate kinase [Atopobium rimae ATCC 49626] gi|221184433|gb|EEE16826.1| thymidylate kinase [Atopobium rimae ATCC 49626] Length = 239 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 7/212 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GLFI+ EGI+G GK+T LL L + + ++ REPGGT +E R +LL + Sbjct: 19 RGLFITLEGIDGVGKSTQADLLAEALMQTDKELVRLREPGGTAISEKIRALLLDASNTDM 78 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E +++ A+R V VI PAL G I+LCDRF DS++AYQ + + Sbjct: 79 ADECELLLYEASRAQLVRQVIEPALARGAIVLCDRFYDSTFAYQAGGRGIDEKVVRRAND 138 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V+P T+I DL +R + D E + R+ ++ ++ Sbjct: 139 LGSCGVVPTRTLIFDLEPAEAFQRAT-------TNGADRMEAEGAAFQRCVREAYIRLSV 191 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R H+V + + V + + +LV + Sbjct: 192 AEPSRVHVVSAYGTIAEVHARTVADLCDLVPE 223 >gi|148553408|ref|YP_001260990.1| thymidylate kinase [Sphingomonas wittichii RW1] gi|166987709|sp|A5V3I6|KTHY_SPHWW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148498598|gb|ABQ66852.1| thymidylate kinase [Sphingomonas wittichii RW1] Length = 208 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 82/209 (39%), Positives = 115/209 (55%), Gaps = 4/209 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ EG EG GK+T L L+ + DV TREPGG+ AEA R +LL D + Sbjct: 3 GRFITLEGGEGVGKSTQAKALAAALRARGLDVVETREPGGSDGAEAIRRLLLEGAADRWN 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AEA++FAAAR DHV IRPA+ G+ ++CDRFLDSS AYQG D + +L I Sbjct: 63 ARAEALLFAAARADHVARTIRPAIEAGRWVVCDRFLDSSIAYQGGADGLGDEAIRTLHAI 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +PD T++LD+PV R + A D FE++D H++ F IA Sbjct: 123 GSAGYLPDRTLLLDMPVFDAAFR----QAEAGIANSDRFEKRDEAFHDRVADSFRRIAAQ 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R +++ S Q V ++ + +L+ Sbjct: 179 EPARIRTINAQGSPQEVTARLIEALADLL 207 >gi|237653168|ref|YP_002889482.1| thymidylate kinase [Thauera sp. MZ1T] gi|237624415|gb|ACR01105.1| thymidylate kinase [Thauera sp. MZ1T] Length = 233 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 107/208 (51%), Gaps = 8/208 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+GAGK++ I+ + LQ DV TREPGGT E R + Sbjct: 30 RGRFITFEGIDGAGKSSQIAAVVALLQAAGRDVDQTREPGGTALGERLRE---LLLHEPM 86 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E EA++ AAR +H+ I PAL G+ ++CDRF D+++AYQ D+L+ Sbjct: 87 HLETEAMLMFAARREHLAARIEPALAAGRWVVCDRFSDATFAYQVGGRGLDRAKFDALEA 146 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T++ DL + RV + D FER+ E+ R +L+ AR Sbjct: 147 WVHPGLQPDLTLVFDLDPALAAARVAS-----TGVDPDRFEREQRDFFERVRAAYLERAR 201 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R ++D+A S +++ +I +V E Sbjct: 202 LAPLRICVIDAARSPEAIRADIERVVRE 229 >gi|120598611|ref|YP_963185.1| thymidylate kinase [Shewanella sp. W3-18-1] gi|146293310|ref|YP_001183734.1| thymidylate kinase [Shewanella putrefaciens CN-32] gi|120558704|gb|ABM24631.1| thymidylate kinase [Shewanella sp. W3-18-1] gi|145565000|gb|ABP75935.1| thymidylate kinase [Shewanella putrefaciens CN-32] gi|319426610|gb|ADV54684.1| thymidylate kinase [Shewanella putrefaciens 200] Length = 208 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 68/207 (32%), Positives = 110/207 (53%), Gaps = 10/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ I+L++ F+++ TREPGGTP AE R ++ + D Sbjct: 6 KFIVIEGLEGAGKSSAITLIRDFIEKHTGRAPICTREPGGTPLAERIRDLVKIADPSDPL 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E+E ++ AAR V NVI+PAL +G+ +L DR SS AYQG ++++ Sbjct: 66 CDESECLLIYAARAQLVANVIKPALAQGQWVLGDRHNLSSLAYQGGGRGLMP-LVEAVSA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +++ PD T+ LDL +GL R R LD E++ + E+ R +L +A Sbjct: 125 ATLKGFKPDLTLYLDLDPKLGLTRAAKR------GELDRIEQQTIDFFERARATYLKLAS 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 D ++D++ + V +IL ++ Sbjct: 179 ED-DSIVVIDASQTMAEVHKDILAVLQ 204 >gi|208780179|ref|ZP_03247521.1| thymidylate kinase [Francisella novicida FTG] gi|208743828|gb|EDZ90130.1| thymidylate kinase [Francisella novicida FTG] Length = 209 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D Sbjct: 1 MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E +++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + + Sbjct: 60 EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD I LD+ +GL+R Q D E+ + + R +F D Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPMLGLQRAQK------VGSPDRIEKAGLEFFNRTRNVFKD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + D +D+A S Q V I I+ + Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203 >gi|83814827|ref|YP_446793.1| thymidylate kinase [Salinibacter ruber DSM 13855] gi|83756221|gb|ABC44334.1| thymidylate kinase [Salinibacter ruber DSM 13855] Length = 221 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 6/209 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L ++FEGI+G+GK+T L LQ + + + REPGGT +E R VLL ++ Sbjct: 2 LLLTFEGIDGSGKSTQAHRLNEHLQERGHKTLLVREPGGTELSEQVRSVLLEPALN-VHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123 AE ++F+AAR V IRPAL G+I++CDRF DS+ AYQG + +L S Sbjct: 61 MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++PD T +++L + + R + A D E +D + + + +A Sbjct: 121 VTDGLVPDRTYLVELDPETA----RARRTEGNDAAGDRMEAEDEAFYHRVAAAYDTLADE 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R H +D S +++ I V L+ Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205 >gi|33239604|ref|NP_874546.1| thymidylate kinase [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|46576462|sp|Q7VE61|KTHY_PROMA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33237129|gb|AAP99198.1| Thymidylate kinase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 220 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 16/213 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL-- 55 G+F+ EGI+G GK+T I L ++L + +TREPGGT ++ R +LL Sbjct: 2 KGIFLVLEGIDGCGKSTQIEHLAQWLPLSGLMPSAAKLFITREPGGTRLGKSLRQLLLGT 61 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 S + E +++AA R HV VI+P + G ++ DRF S+ AYQG Sbjct: 62 SPTDESPKPLTELLLYAADRAQHVSQVIQPKINNGDWVISDRFSSSTLAYQGFGRRLDKS 121 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + L+ I+ Q + PD T +L++PV +KR RE+ D E + + ++ Sbjct: 122 LIKELENIATQGITPDLTFLLEIPVSESIKR-------RENTRKDRIESEGEIFLKRVSD 174 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 F IA+N D ++ + V+ I N + Sbjct: 175 GFSYIAKN--DNWLVIPANQKKDIVSKQIENKL 205 >gi|189183417|ref|YP_001937202.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda] gi|238692237|sp|B3CR61|KTHY_ORITI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189180188|dbj|BAG39968.1| thymidylate kinase [Orientia tsutsugamushi str. Ikeda] Length = 217 Score = 222 bits (566), Expect = 4e-56, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GKTT LL L TRE GGT AE R ++L + Sbjct: 7 GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR +H+E IRP L EGK ++CDRF+DS+ YQ E Q L L+ L Sbjct: 64 ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSENSEEQQLILE-LHRK 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+I+++ I ++R++ R + + L+ F+ ++ H+K F+ +++ Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDSRNQQFHQKITDAFIQVSKL 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R ++ + V++ ++NI+ ++ Sbjct: 183 FPERIVQINGEPMIEDVSSEVINIINNKMK 212 >gi|148284569|ref|YP_001248659.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong] gi|166221759|sp|A5CDS9|KTHY_ORITB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146740008|emb|CAM80084.1| thymidylate kinase [Orientia tsutsugamushi str. Boryong] Length = 217 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 113/210 (53%), Gaps = 4/210 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EG+GKTT LL L TRE GGT AE R ++L + Sbjct: 7 GKFITFEGNEGSGKTTQSKLLYEKLLDNGIKAVWTREIGGTDIAELIRDIVL---FKDMS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR +H+E IRP L EGK ++CDRF+DS+ YQ + Q L L+ L Sbjct: 64 ITTELLLIMAARYEHIEKFIRPNLNEGKWVICDRFIDSTLCYQSKNSEEQQLILE-LHRK 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+I+++ I ++R++ R + + L+ F+ ++ H+K F+ +++ Sbjct: 123 LLDNFFPDLTLIINVSPSIAMQRIKIREIHKNTNQLNKFDNRNQQFHQKITDAFIQVSKL 182 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P+R ++ + V++ ++NI+ ++ Sbjct: 183 FPERIVQINGEPMIEDVSSEVINIINNKMK 212 >gi|118498162|ref|YP_899212.1| thymidylate kinase [Francisella tularensis subsp. novicida U112] gi|194324335|ref|ZP_03058108.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE] gi|254373508|ref|ZP_04988995.1| thymidylate kinase [Francisella tularensis subsp. novicida GA99-3549] gi|254374970|ref|ZP_04990450.1| thymidylate kinase [Francisella novicida GA99-3548] gi|166221743|sp|A0Q893|KTHY_FRATN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118424068|gb|ABK90458.1| thymidylate kinase [Francisella novicida U112] gi|151571233|gb|EDN36887.1| thymidylate kinase [Francisella novicida GA99-3549] gi|151572688|gb|EDN38342.1| thymidylate kinase [Francisella novicida GA99-3548] gi|194321400|gb|EDX18885.1| thymidylate kinase [Francisella tularensis subsp. novicida FTE] Length = 209 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D Sbjct: 1 MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E +++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + + Sbjct: 60 EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD I LD+ +GL+R Q D E+ + + R +F D Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRNVFKD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + D +D+A S Q V I I+ + Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203 >gi|116073928|ref|ZP_01471190.1| Thymidylate kinase [Synechococcus sp. RS9916] gi|116069233|gb|EAU74985.1| Thymidylate kinase [Synechococcus sp. RS9916] Length = 215 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 15/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 G F+ EGI+G GKTT + L +L + TREPGGTP +A R +LL Sbjct: 5 RGRFLVMEGIDGCGKTTQMQRLAEWLPGSGLMPSGAQLVQTREPGGTPLGQALRQLLLHP 64 Query: 58 GVD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G AE +++AA R HV+ VIRPAL G ++ DRF S+ AYQG Sbjct: 65 PEAVAPGPVAELLLYAADRAQHVDQVIRPALARGDWVISDRFAGSTLAYQGYGRELNREL 124 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L++I+ + PD T +LDLP+ + R R D E ++ + Sbjct: 125 IVQLEQIATTGLQPDATFLLDLPLAVSQAR-------RADQANDRIEAAGQAFLQRVSEG 177 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F +A + C +D+ +V I + + Sbjct: 178 FRVLAAGRGWWC--IDADQVPDAVTAQIRDRLQR 209 >gi|330723507|gb|AEC45877.1| thymidylate kinase [Mycoplasma hyorhinis MCLD] Length = 215 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEGI+G+GK+T I L +LQ + ++ +TREPGG AE R++LL + Sbjct: 1 MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKYE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I+FAA+R H+E +I P+L EGKI++ DRF+DSS AYQ + ++ L Sbjct: 61 -ISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQAFGNKIDINQVEQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T LD+P+ +R +++ D E K K + + Sbjct: 120 NDWISNKTQPDLTFWLDVPIQQAFER--------KTSDNDRIEDKGNKFFSKVCSGYEYL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 ++ P+R +D+ + V I E +K V ++ Sbjct: 172 SKKYPERIIRIDALQNEDKVFEQIKKAFEEKREKLVKKWNT 212 >gi|153835690|ref|ZP_01988357.1| thymidylate kinase [Vibrio harveyi HY01] gi|148867682|gb|EDL66956.1| thymidylate kinase [Vibrio harveyi HY01] Length = 209 Score = 221 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 9/212 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 FI EG+EGAGK+T I + L+ + + TREPGGTP AE R ++ ++ Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIENIVNTREPGGTPLAEKMRALVKEEHEGEDLK 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ AAR+ VENVI+PAL + ++ DR SS AYQG + +L++ Sbjct: 65 DMTELLLLYAARVQLVENVIKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDT 124 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ E P T+ +D+ +GL+R + R LD E+ D+ E+ R+ +L++A Sbjct: 125 TLGEFKPAFTLYMDIDPRVGLERARGR------GELDRIEKMDISFFERTRERYLELANA 178 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D I+++ S + VA +I + + + + Sbjct: 179 D-DSIVIINAEQSIEDVAQDIKAALNKWLAAQ 209 >gi|294102043|ref|YP_003553901.1| thymidylate kinase [Aminobacterium colombiense DSM 12261] gi|293617023|gb|ADE57177.1| thymidylate kinase [Aminobacterium colombiense DSM 12261] Length = 203 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 9/211 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +FI+ EGI+G GK+T + LK LQ+K + V TREPGG + R +LL D Sbjct: 1 MFITLEGIDGCGKSTQAAFLKEQLQQKKKEPVLWTREPGGWVHGDFVRTLLLEK--DLRH 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +E +F R +HV VI PAL G+I+LC+R+ DS+ AYQ ++ L Sbjct: 59 ELSELFLFVIDRCEHVSQVISPALSCGQIVLCERYTDSTRAYQIWGRGLPEEKVEDLFAW 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 PD T+ +D P+ + + R++ D E + + + + ++++ Sbjct: 119 CSF-PEPDLTLWIDTPLPVAINRIKT-----TRGHFDRIESETDGFLNRVCEGYKELSKR 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R +D + + V+ I +V + K Sbjct: 173 FPHRIVRIDGSQPTEEVSAQIWKVVEVHLSK 203 >gi|78213888|ref|YP_382667.1| thymidylate kinase [Synechococcus sp. CC9605] gi|123577474|sp|Q3AH20|KTHY_SYNSC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78198347|gb|ABB36112.1| Thymidylate kinase [Synechococcus sp. CC9605] Length = 209 Score = 221 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 99/216 (45%), Gaps = 15/216 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLS- 56 +G FI EGI+G GKTT I L +L K V TREPGGTP + R +LL Sbjct: 2 TGRFIVLEGIDGCGKTTQIQHLLEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AE +++AA R HVE +IRPAL G ++ DRF S+ AYQG Sbjct: 62 SDQEAPAPTAELMLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L++I+ + PD T+ L L V L+R R D E + E+ Q Sbjct: 122 IQRLEQIATAGLQPDITLWLRLSVQESLQR-------RLGDKEDRIEAEGAAFLERVAQG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F +A + V + S +V + + E + Sbjct: 175 FAQLA--EHRSWCAVAADQSASAVRAALERQLQEHL 208 >gi|260435535|ref|ZP_05789505.1| thymidylate kinase [Synechococcus sp. WH 8109] gi|260413409|gb|EEX06705.1| thymidylate kinase [Synechococcus sp. WH 8109] Length = 209 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 72/221 (32%), Positives = 103/221 (46%), Gaps = 19/221 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 +G FI EGI+G GKTT I L +L K V TREPGGTP + R +LL Sbjct: 2 TGRFIVLEGIDGCGKTTQIQHLIEWLPNSGLMPKGAAVVCTREPGGTPLGRSIRELLLHT 61 Query: 58 GV-DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AE +++AA R HVE +IRPAL G ++ DRF S+ AYQG Sbjct: 62 ADQEAPAPTAELLLYAADRAQHVETLIRPALERGDWVISDRFSGSTLAYQGYGRGLDRDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ + PD T+ L L V L+R R D E + E+ Q Sbjct: 122 IQRLERIATTGLQPDLTLWLRLSVQESLQR-------RLGDKEDRIEAEGAAFLERVAQG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 F ++AR + V + S A+ + + Q+R++ Sbjct: 175 FAELARQRS--WCAVAADQS----ASAVRAALERQFQERLA 209 >gi|187931061|ref|YP_001891045.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica FSC147] gi|238691529|sp|B2SF22|KTHY_FRATM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187711970|gb|ACD30267.1| thymidylate kinase [Francisella tularensis subsp. mediasiatica FSC147] Length = 209 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 111/211 (52%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D Sbjct: 1 MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E +++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + + Sbjct: 60 EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD I LD+ +GL+R Q D E+ + K R++F D Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNKTRKVFKD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + D +D+A S Q V I I+ + Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203 >gi|318040596|ref|ZP_07972552.1| thymidylate kinase [Synechococcus sp. CB0101] Length = 219 Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 G F+ EGI+G GKTT I L+ +L R + + VTREPGGT A R +LL Sbjct: 4 RGRFLVLEGIDGCGKTTQIEHLRHWLPRSGLMPEGAQLMVTREPGGTELGRALRQLLLHP 63 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + AE +++AA R HV+ I PAL G +L DRF S+ AYQG Sbjct: 64 PGAAAPCSTAELLLYAADRAQHVQQQILPALEAGHWVLSDRFSGSTAAYQGYGRGLSLAL 123 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +D L I+ + + PD T++LD+P++ L+R +R D E + Sbjct: 124 IDQLSLIACRGLQPDLTLLLDVPLEESLRRRGHR-------AADRIEASGEAFLARVCAG 176 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 F+ +A P +D + ++V+ + + Sbjct: 177 FVALAAQ-PG-WQRLDGSQPPEAVSAALEAAI 206 >gi|89901037|ref|YP_523508.1| thymidylate kinase [Rhodoferax ferrireducens T118] gi|122479112|sp|Q21W76|KTHY_RHOFD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|89345774|gb|ABD69977.1| thymidylate kinase [Rhodoferax ferrireducens T118] Length = 215 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 115/218 (52%), Gaps = 18/218 (8%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M + G+FISFEGI+GAGK+THI L + + + V +TREPGGTP AE R ++L+ Sbjct: 1 MTTEGIFISFEGIDGAGKSTHIDALAQAFRAQGRAVTLTREPGGTPLAEKLRVLVLN--- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D A EA++ AAR DH++ +I PAL G ++LCDRF D+++AYQG L Sbjct: 58 DAMDAMTEALLVFAARRDHLQQLIEPALARGDVVLCDRFTDATFAYQGAGRGFDLKILSF 117 Query: 120 LQEIS--VQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L+ +Q + PD T+ DL I +R+ + D FE + V Sbjct: 118 LERTVQSIQGLEPDFIRNPDLTVWFDLAAAIAAQRLAG------ARSPDKFEAQPVEFFR 171 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +L+ P R +++ + ++V ++L+ V Sbjct: 172 RVSDGYLNRMTACPSRFARIEANQTREAVWQDVLHAVQ 209 >gi|119357439|ref|YP_912083.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266] gi|166221736|sp|A1BGY2|KTHY_CHLPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|119354788|gb|ABL65659.1| thymidylate kinase [Chlorobium phaeobacteroides DSM 266] Length = 219 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 4/209 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+GAGK+T I L+ L + + REPGGT AE R +LL + A Sbjct: 1 MLITFEGIDGAGKSTQIKKLQTVLNKAGVESVTLREPGGTEVAEKIRSILLESRHE-ISA 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F+A R + V+ VI PAL +++ DRF DS+ AYQG L+++ S Sbjct: 60 VGELLLFSATRAELVQQVIIPALQTDAVVILDRFYDSTRAYQGYGRGIDLTILETIIAFS 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIA 181 ++PD T LD+ + + R ++ SL E++ LD ER + + K R + +I Sbjct: 120 TFNLIPDVTFYLDIKPEDAMIRKNSKKSLPLAFENSDLDRMERSGLEFYSKVRNGYFEII 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 R++ R ++++ + IL + + Sbjct: 180 RSEQHRFKVLNALEHPDDLHRQILETLRK 208 >gi|56707291|ref|YP_169187.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU S4] gi|110669761|ref|YP_666318.1| thymidylate kinase [Francisella tularensis subsp. tularensis FSC198] gi|134301328|ref|YP_001121296.1| thymidylate kinase [Francisella tularensis subsp. tularensis WY96-3418] gi|224456356|ref|ZP_03664829.1| thymidylate kinase [Francisella tularensis subsp. tularensis MA00-2987] gi|254369973|ref|ZP_04985981.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874129|ref|ZP_05246839.1| thymidylate kinase [Francisella tularensis subsp. tularensis MA00-2987] gi|73920819|sp|Q5NIF5|KTHY_FRATT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|122971099|sp|Q14JV8|KTHY_FRAT1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221744|sp|A4IW74|KTHY_FRATW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56603783|emb|CAG44750.1| thymidylate kinase [Francisella tularensis subsp. tularensis SCHU S4] gi|110320094|emb|CAL08133.1| thymidylate kinase [Francisella tularensis subsp. tularensis FSC198] gi|134049105|gb|ABO46176.1| thymidylate kinase [Francisella tularensis subsp. tularensis WY96-3418] gi|151568219|gb|EDN33873.1| hypothetical protein FTBG_01572 [Francisella tularensis subsp. tularensis FSC033] gi|254840128|gb|EET18564.1| thymidylate kinase [Francisella tularensis subsp. tularensis MA00-2987] gi|282158410|gb|ADA77801.1| thymidylate kinase [Francisella tularensis subsp. tularensis NE061598] Length = 209 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 111/211 (52%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D Sbjct: 1 MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E +++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + + Sbjct: 60 EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD I LD+ +GL+R Q D E+ + + R++F D Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + D +D+A S Q V I I+ + Sbjct: 174 LVK-DSDNAIEIDAAKSIQEVEKQIYLILDK 203 >gi|294508726|ref|YP_003572785.1| Thymidylate kinase [Salinibacter ruber M8] gi|294345054|emb|CBH25832.1| Thymidylate kinase [Salinibacter ruber M8] Length = 221 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 6/209 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L ++FEGI+G+GK+T L LQ + ++ + REPGGT +E R VLL ++ Sbjct: 2 LLLTFEGIDGSGKSTQAHRLNEHLQERGHETLLVREPGGTELSEQVRSVLLEPTLN-VHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123 AE ++F+AAR V IRPAL G+I++CDRF DS+ AYQG + +L S Sbjct: 61 MAELLLFSAARTQLVTERIRPALEAGRIVICDRFYDSTTAYQGAGRNVADPEWLQSFHRR 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++PD T +++L + R R ++A D E +D + + + +A Sbjct: 121 VTDGLVPDRTYLVELDPETARAR---RTEGDDAAG-DRMEAEDEAFYHRVAAAYDTLADE 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R H +D S +++ I V L+ Sbjct: 177 HSARIHRLDGHRSIEALHAEIRGDVEALL 205 >gi|163782656|ref|ZP_02177653.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159882229|gb|EDP75736.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 200 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 14/204 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GKTT L FL+ K DV + REPGGTP E R +L++ E Sbjct: 1 MLITFEGIDGSGKTTQSKKLYEFLREKGLDVSLYREPGGTPLGEELRDILIN---KELNE 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F AR V ++P + G +++ DRF DS+ AYQG F+ L E + Sbjct: 58 RTELLLFEGARTQLVLERLKPDMERGMVVILDRFTDSTLAYQGYGRGLDLEFVKKLNEFA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD T +LD+ + + R++ + F+ +V +K R+ FL+IAR + Sbjct: 118 SFGIKPDITFLLDIEPETAVGRIREKS---------RFD--NVDFLKKVREGFLEIARKE 166 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 +R ++D+ + V +I + Sbjct: 167 SERVVVLDTHRGEEEVFGDIKETL 190 >gi|197294306|ref|YP_001798847.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853633|emb|CAM11504.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 209 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 115/208 (55%), Gaps = 5/208 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG E +GKTT +L + L + + +T+EPGG R +L+ + Sbjct: 1 MFISFEGGEASGKTTLARILAQKLSGNKHQIVLTKEPGGYHPFLFIREKILNPEMPPIDL 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + EA+++AA R +H++N+I PAL E KI++CDR+LDSS+ YQG +++ + + + Sbjct: 61 KTEALLYAADRNEHLKNIILPALKENKIVICDRYLDSSFVYQGYARKLGQKYIEYINDFA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ + P+ T LDL I KR++ L + + + + H+K R+ +L +A+ + Sbjct: 121 LKHL-PNITFYLDLDPVIAKKRLE----LFRPDKQNRLDLETIEFHQKIREGYLKLAQKE 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 R + + +S +++ I V L+ Sbjct: 176 NKRIIKIQADNSLPQLSSLIYQKVKHLL 203 >gi|304372905|ref|YP_003856114.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1] gi|304309096|gb|ADM21576.1| Thymidylate kinase [Mycoplasma hyorhinis HUB-1] Length = 215 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEGI+G+GK+T I L +LQ + ++ +TREPGG AE R++LL + Sbjct: 1 MFITFEGIDGSGKSTLIKKLYHYLQNEFPKKEIILTREPGGFQVREAEIIRNLLLDKKYE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I+FAA+R H+E +I P+L EGKI++ DRF+DSS AYQ + ++ L Sbjct: 61 -ISKFTEVILFAASRRLHLEKLIWPSLQEGKIVISDRFIDSSIAYQVFGNEIDINQVEQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T LD+P+ +R +++ D E K K + + Sbjct: 120 NDWISNKTQPDLTFWLDVPIQQAFER--------KTSDNDRIEDKGNKFFSKVCSGYEYL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 ++ P+R +D+ + V I E +K V ++ Sbjct: 172 SKKYPERIIRIDALQNEDKVFEQIKKAFEEKREKLVKKWNT 212 >gi|222528529|ref|YP_002572411.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725] gi|222455376|gb|ACM59638.1| thymidylate kinase [Caldicellulosiruptor bescii DSM 6725] Length = 208 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 112/212 (52%), Gaps = 8/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 60 KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D+ H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------MAGKNDRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ +RC +++ S + V +L + +L+ Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLLEIEKLL 204 >gi|90406894|ref|ZP_01215085.1| thymidylate kinase [Psychromonas sp. CNPT3] gi|90311936|gb|EAS40030.1| thymidylate kinase [Psychromonas sp. CNPT3] Length = 218 Score = 220 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 108/212 (50%), Gaps = 11/212 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLL-SCGVD 60 FI EG+EGAGKTT I + +L + + TREPGGT E R ++ + Sbjct: 10 KFIVIEGLEGAGKTTAIRYIGNWLAEQGVPTSKMTYTREPGGTKLGEYMRDIIKMDLNDE 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +AE ++ A+R+ VE VI+PAL +G I++ DR SS AYQG F+ SL Sbjct: 70 SLDDKAELLLMYASRVQLVEAVIKPALAQGHIVIGDRHNYSSLAYQGGGRGLDMHFIHSL 129 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++S+ + D T+ LD+ +GL+R + R LD ER + E+ RQ+FL++ Sbjct: 130 KQLSLGDFKADFTLYLDIDPALGLQRARGR------GELDRIERLAIDFFERTRQVFLNL 183 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + +D++ + V I + + Sbjct: 184 VADD-ESAVTIDASKTPAQVEKAIFKQLDNWL 214 >gi|288575015|ref|ZP_06393372.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570756|gb|EFC92313.1| thymidylate kinase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 213 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 10/211 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SGLFIS EGI+G GK+T LL+ L+ + V +T+EPG R +LL G D Sbjct: 9 RSGLFISLEGIDGCGKSTQAMLLRDHLEERGRSVVLTKEPGDWSHGGEIRRILL--GGDL 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +F A R +H+ V+ PAL G I++CDR+ DS+ AYQ F++ L Sbjct: 67 RHEHTELFLFMADRCEHLLQVVIPALDRGDIVICDRYTDSTLAYQCFGRGLDPTFVEGLF 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +PD T +D+P+ L R+ +R LD E +D ++ R F + Sbjct: 127 NW-SDFPVPDVTFWIDVPLSCSLGRISSR------GSLDRME-EDSDFLDRVRSGFQSLR 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + DR +D V + ++ + L+ Sbjct: 179 ESYEDRIIRIDGEGEENVVFSRLMESLEGLI 209 >gi|302871135|ref|YP_003839771.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47] gi|302573994|gb|ADL41785.1| thymidylate kinase [Caldicellulosiruptor obsidiansis OB47] Length = 210 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 67/215 (31%), Positives = 112/215 (52%), Gaps = 8/215 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLFKVEKYLKDKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 60 KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSIVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I ++ PD I+L L +I ++R+Q + + + +D+ H + F ++ Sbjct: 120 NSIFEDKIKPDLYIVLTLEPEIAIQRIQ------MAGKNNRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +RC +++ S + V + + L + + Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVCREIEGLFESK 207 >gi|121996816|ref|YP_001001603.1| dTMP kinase [Halorhodospira halophila SL1] gi|171769495|sp|A1WSY9|KTHY_HALHL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|121588221|gb|ABM60801.1| thymidylate kinase [Halorhodospira halophila SL1] Length = 215 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 104/211 (49%), Gaps = 6/211 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG+EGAGKTT + +++ L D TREPGGTP EA R LL Sbjct: 4 RGCFITVEGLEGAGKTTCLQAIEQMLLEAGIDRPLFTREPGGTPFGEALRGALLDPQYRG 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AEAEA+ AAR +H+ VIRP L G+ ++ DRF D++YAYQG + L+ Sbjct: 64 LTAEAEALTVFAARAEHLAQVIRPTLDAGRWVISDRFTDATYAYQGGGRGLGDERIAVLE 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD T++LD+ +G RV +R D FE++ + R + A Sbjct: 124 RWVHGGFTPDRTLLLDVDPTVGRSRVAHRGD-----GEDRFEQERDPFFQAARAAYARRA 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P+R +D+ VA + V +L+ Sbjct: 179 AADPERFRCIDANRPEGEVAEQVRAGVADLL 209 >gi|332184711|gb|AEE26965.1| Thymidylate kinase [Francisella cf. novicida 3523] Length = 209 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 112/211 (53%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S FI EG++GAGK+T I+ ++++L++ + TREPGGT AE R+++L D Sbjct: 1 MQS-KFIVIEGLDGAGKSTAINFVRKYLEQNSLAAIYTREPGGTKIAEELRNLVLHNKYD 59 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E +++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + + Sbjct: 60 EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD I LD+ +GL+R Q D E+ + + R++F D Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPMLGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + + D +D+A S Q V I I+ + Sbjct: 174 LVK-ESDNAIEIDAALSIQEVEKQIYLILDK 203 >gi|115315297|ref|YP_764020.1| thymidylate kinase [Francisella tularensis subsp. holarctica OSU18] gi|122324708|sp|Q0BKK1|KTHY_FRATO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|115130196|gb|ABI83383.1| dTMP kinase [Francisella tularensis subsp. holarctica OSU18] Length = 209 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 111/211 (52%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D Sbjct: 1 MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E +++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + + Sbjct: 60 EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + PD I LD+ +GL+R Q D E+ + + R++F D Sbjct: 120 LNNNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + ++ + +D+A S Q V I I+ + Sbjct: 174 LVKDLDNAIE-IDAAKSIQEVEKQIYLILDK 203 >gi|294141343|ref|YP_003557321.1| thymidylate kinase [Shewanella violacea DSS12] gi|293327812|dbj|BAJ02543.1| thymidylate kinase [Shewanella violacea DSS12] Length = 210 Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 10/210 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59 N FI EG+EGAGK++ ISL+ F+++ TREPGGTP AE R ++ + Sbjct: 5 NKSKFIVIEGLEGAGKSSAISLVGDFIEKHTGLVPVCTREPGGTPLAERMRDLIKIADET 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++ AAR V NVI+PAL G +L DR SS AYQG + Sbjct: 65 DPLCDEAECLLLYAARAQLVANVIKPALNRGAWVLGDRHNLSSLAYQGGGRGLMP-LVQV 123 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + ++ + PD T+ LD+ GL+R R LD E++ + E+ R FL Sbjct: 124 LSKATLGDFKPDLTLYLDIDPAQGLQRAAKR------GELDRIEKQALDFFERARATFLS 177 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209 A+ D ++D+ + V +IL ++ Sbjct: 178 FAKED-DTIAVIDAGQTMAEVHKDILALLQ 206 >gi|89256933|ref|YP_514295.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS] gi|156503123|ref|YP_001429188.1| thymidylate kinase [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009997|ref|ZP_02274928.1| thymidylate kinase [Francisella tularensis subsp. holarctica FSC200] gi|254368198|ref|ZP_04984218.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257] gi|254369798|ref|ZP_04985808.1| thymidylate kinase [Francisella tularensis subsp. holarctica FSC022] gi|290953993|ref|ZP_06558614.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1] gi|295312612|ref|ZP_06803364.1| thymidylate kinase [Francisella tularensis subsp. holarctica URFT1] gi|122500313|sp|Q2A1V7|KTHY_FRATH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221742|sp|A7NE29|KTHY_FRATF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|89144764|emb|CAJ80099.1| thymidylate kinase [Francisella tularensis subsp. holarctica LVS] gi|134254008|gb|EBA53102.1| thymidylate kinase [Francisella tularensis subsp. holarctica 257] gi|156253726|gb|ABU62232.1| thymidylate kinase [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122757|gb|EDO66886.1| thymidylate kinase [Francisella tularensis subsp. holarctica FSC022] Length = 209 Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 112/211 (53%), Gaps = 9/211 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S FI EG++GAGK+T IS ++++L++ N TREPGGT AE R+++L D Sbjct: 1 MQS-KFIVIEGLDGAGKSTAISFVRKYLEKNNLAAIYTREPGGTKIAEELRNLVLHNKYD 59 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E +++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG + + + Sbjct: 60 EEIHSDSELLMIYAGRVQHYRNLIAPALEKGINVVSDRFYWSSMAYQGGGRGVELSKIRA 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + + PD I LD+ +GL+R Q D E+ + + R++F D Sbjct: 120 LNDNFLNGCEPDLVIYLDIDPILGLQRAQK------VGSPDRIEKAGLEFFNRTRKVFKD 173 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + ++ + +D+A S Q V I I+ + Sbjct: 174 LVKDLDNAIE-IDAAKSIQEVEKQIYLILDK 203 >gi|312134417|ref|YP_004001755.1| thymidylate kinase [Caldicellulosiruptor owensensis OL] gi|311774468|gb|ADQ03955.1| thymidylate kinase [Caldicellulosiruptor owensensis OL] Length = 209 Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 110/215 (51%), Gaps = 8/215 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRKGKLIVFEGNDGSGKTTQLFKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AA R +HV+NV+ PA+ EG I+LCDR++ SS YQG + L Sbjct: 60 KMDGLTEALLLAADRNEHVKNVLIPAMDEGYIVLCDRYILSSVVYQGIVRGVGIENILKL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D+ H + F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLDPEIALQRIK------MAGKNDRLDLEDLEFHRRVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +RC ++ S + V + + L + R Sbjct: 174 SKWF-ERCVNIEVQGSEKEVFEKVCCEIERLFESR 207 >gi|78183894|ref|YP_376328.1| thymidylate kinase [Synechococcus sp. CC9902] gi|123582163|sp|Q3B043|KTHY_SYNS9 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78168188|gb|ABB25285.1| thymidylate kinase [Synechococcus sp. CC9902] Length = 209 Score = 219 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 15/217 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 +G FI +GI+G GK+T I L ++L + TREPGGTP ++ R +LL Sbjct: 2 TGRFIVLDGIDGCGKSTQIRHLAQWLPASGLMPSTAQLICTREPGGTPLGQSIRELLLHT 61 Query: 58 GVDEF-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D+ AE +++AA R HV+ VIRPAL+ G +L DRF S+ AYQG Sbjct: 62 EADQVPSVTAELLLYAADRAQHVDTVIRPALLRGDWVLSDRFAGSTLAYQGYGRGLDRQL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ + PD T L +PV++ L+R R D E + + Sbjct: 122 ITRLESIATTGLEPDLTAWLMVPVEVSLQR-------RHGEKEDRIEAEGRAFLRRVADG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 F +A + +D+ S ++ + + E +Q Sbjct: 175 FAVLAEQR--NWSQIDAQQSVSKLSQVLEQTLRETLQ 209 >gi|228982456|ref|ZP_04142715.1| Thymidylate kinase [Bacillus thuringiensis Bt407] gi|228776639|gb|EEM24947.1| Thymidylate kinase [Bacillus thuringiensis Bt407] Length = 206 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 113/212 (53%), Gaps = 9/212 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF+S EG EG+GK+ I L +L+ + + +REPGG AE R +++ +E Sbjct: 3 TRGLFVSIEGGEGSGKSALIQGLSLYLEEQGMECLTSREPGGVKVAEEIRELIM---ENE 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++FA+AR +H +N I PAL EGKI++CDRF+DSS YQG + S+ Sbjct: 60 MDAITEALLFASARREHFKNKISPALTEGKIVICDRFVDSSIVYQGYVQGIGMDNVLSIN 119 Query: 122 EISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ + MP T+ LD+ I L R+ + + F+ K + H+K R+ +L I Sbjct: 120 SQALEGLVMPHLTLYLDVEPTIALNRIAQ-----NNRETNRFDEKSIEFHKKVREGYLLI 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +R VD++ S V + + ++ Sbjct: 175 EEKHSNRIKKVDASLSKDEVLQQSIEYIKNIL 206 >gi|76788910|ref|YP_327996.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13] gi|237802612|ref|YP_002887806.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT] gi|237804534|ref|YP_002888688.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT] gi|255310988|ref|ZP_05353558.1| thymidylate kinase [Chlamydia trachomatis 6276] gi|255317289|ref|ZP_05358535.1| thymidylate kinase [Chlamydia trachomatis 6276s] gi|123607082|sp|Q3KMH4|KTHY_CHLTA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|76167440|gb|AAX50448.1| thymidylate kinase [Chlamydia trachomatis A/HAR-13] gi|231272834|emb|CAX09743.1| thymidylate kinase [Chlamydia trachomatis B/TZ1A828/OT] gi|231273846|emb|CAX10636.1| thymidylate kinase [Chlamydia trachomatis B/Jali20/OT] gi|296435703|gb|ADH17877.1| thymidylate kinase [Chlamydia trachomatis G/9768] gi|296436627|gb|ADH18797.1| thymidylate kinase [Chlamydia trachomatis G/11222] gi|296437563|gb|ADH19724.1| thymidylate kinase [Chlamydia trachomatis G/11074] gi|297140062|gb|ADH96820.1| thymidylate kinase [Chlamydia trachomatis G/9301] Length = 203 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 106/210 (50%), Gaps = 9/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT I L + L + ++ TREPGG ++ R +LL + Sbjct: 1 MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F AAR H++ I PAL GK ++ DRF DS+ YQG F+ +L Sbjct: 60 YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + +PD T +LD+P GL R + LD FE+K + H+ R+ FL +A Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR ++D+ ++ L + L+ Sbjct: 174 KAPDRYKVLDALLPTEASVDQALLQIRALI 203 >gi|326387758|ref|ZP_08209364.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370] gi|326207804|gb|EGD58615.1| thymidylate kinase [Novosphingobium nitrogenifigens DSM 19370] Length = 207 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 83/208 (39%), Positives = 122/208 (58%), Gaps = 4/208 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++G FI+ EG EG GK+T + LL + LQ + V TREPGGTP AEA R ++L+ + Sbjct: 1 MSAGRFIALEGGEGVGKSTQLRLLAQALQADGHVVVTTREPGGTPGAEAIRAMVLANEGE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +G AEA++FAAAR DHV+ +IRPAL G+ +L DR+LDSS AYQG + +L Sbjct: 61 GWGPRAEALLFAAARADHVDRLIRPALERGEWVLTDRYLDSSRAYQGGGSGLSDDDILAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + ++PD TI+L L + +R+ +LR+ D +D H + F Sbjct: 121 HRIGSEGLLPDRTILLTLDPEETARRL----TLRDEGRADRIGGRDAAYHARVAAAFRRF 176 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A +P R +VD++ + +SV IL+ V Sbjct: 177 AEAEPHRFTLVDASGTPESVHARILSAV 204 >gi|289548995|ref|YP_003473983.1| thymidylate kinase [Thermocrinis albus DSM 14484] gi|289182612|gb|ADC89856.1| thymidylate kinase [Thermocrinis albus DSM 14484] Length = 199 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 14/208 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+G+GKTT L FLQ++ Y + ++PG TP AE R +L E Sbjct: 1 MLISIEGIDGSGKTTVAHALVDFLQKEGYPAVLFKDPGDTPLAEEIRSLLFK---YEMDP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F AAR I PAL EGKI++ DRF+DS+ AYQG + L I+ Sbjct: 58 ITELLLFEAARSSLTWEKILPALSEGKIVILDRFIDSTVAYQGYGREINLGTVSILNHIA 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + P+ T++L++P+ + L R+ +R FER+ K R ++ +A + Sbjct: 118 TRGIKPNLTLLLNVPLHVALSRLSDRS---------RFERE--EYLRKVRDAYILLAHQE 166 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 +R IVD++ SF+ V + V ++ Sbjct: 167 KERIKIVDASRSFEEVFEEVKTEVLSVL 194 >gi|114563411|ref|YP_750924.1| dTMP kinase [Shewanella frigidimarina NCIMB 400] gi|122299553|sp|Q081H9|KTHY_SHEFN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|114334704|gb|ABI72086.1| thymidylate kinase [Shewanella frigidimarina NCIMB 400] Length = 215 Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 10/205 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59 G FI EG+EGAGK++ I+L+ +++ TREPGGTP AE R ++ + Sbjct: 4 QQGKFIVIEGLEGAGKSSAIALVNDIIKQHIGQAPVCTREPGGTPLAEKMRDLVKIADET 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++ AAR + NVI+PAL G+ +L DR SS AYQG + + Sbjct: 64 DPLCDEAECLLIYAARTQLIANVIKPALSVGQWVLGDRHNLSSLAYQGGGRGLMP-LVKA 122 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + ++ PD T+ LD+ +GL R +R LD E++ + E+ R+ +L Sbjct: 123 VSDACLRGFKPDLTLYLDIDPTLGLSRAASR------GELDRIEQQAIDFFERARRTYLQ 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 +A D ++D++ S + V +I Sbjct: 177 LAHED-DSIVVIDASQSMEQVHNDI 200 >gi|167627244|ref|YP_001677744.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|238687894|sp|B0TWY5|KTHY_FRAP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|167597245|gb|ABZ87243.1| dTMP kinase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 204 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 8/207 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG++GAGK+T I +K++L K+ TREPGGT AE R ++L DE Sbjct: 3 KFIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIH 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG L+ L E Sbjct: 63 PDSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGVDKLNVLNET 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ PD I LD+ IGL R D E+ + ++ R +F + Sbjct: 123 FLKDCQPDLIIYLDIDPAIGLARAGK------VGSPDRIEKAGLAFFDRTRAVFKSLVAA 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 + +D++ S + I I+ + Sbjct: 177 NHNAYE-IDASQSIDVIEKEIYAILDK 202 >gi|296116333|ref|ZP_06834949.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769] gi|295977152|gb|EFG83914.1| dTMP kinase [Gluconacetobacter hansenii ATCC 23769] Length = 224 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 111/214 (51%), Gaps = 10/214 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +GLFI+FEG EGAGK+T + LL+ L + + TREPGGTP AEA R LL D Sbjct: 10 TGLFITFEGGEGAGKSTQVRLLQEHLATIMPSDRIVRTREPGGTPGAEAVRDFLLFGEHD 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119 AE ++ AR DHV+ +IRPAL GK+++ DRF DS+ AYQG LD Sbjct: 70 -LSLRAETLMHFGARYDHVDRLIRPALEAGKVVISDRFTDSTAAYQGYGRGMGDPAILDL 128 Query: 120 LQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + Q PD T ILD+P + +R++ R D +E H + + F Sbjct: 129 IASLRQQTGARPDMTFILDVPRAMARERLRAR-----GNRPDRYETAAEAFHARVAEGFA 183 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 IAR +P RC +D+A VA + V + Sbjct: 184 AIARQEPGRCITLDAAQPPDIVAQAVARHVATRL 217 >gi|71892180|ref|YP_277912.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|123640937|sp|Q492Q6|KTHY_BLOPB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71796286|gb|AAZ41037.1| thymidylate kinase [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 212 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 110/211 (52%), Gaps = 11/211 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCG- 58 M++ FI+ EG++GAGKTT + ++L + D+ T EPGGTP ++ R ++ G Sbjct: 1 MDN-RFITIEGLDGAGKTTITHRVSKYLNQYGVTDILTTHEPGGTPVSDFLRVLIKYGGP 59 Query: 59 -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + +E ++ AARL +ENVI+PAL +G ++ DRF SS AYQG L L Sbjct: 60 MNEPINSISELLMIYAARLQLIENVIKPALSKGYWVIGDRFDLSSQAYQGGGRGIDILLL 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +L + PD T LD+ ++ + R+ +R LD E++ + ++ R + Sbjct: 120 HALSNKITNTLSPDLTFYLDISPELSISRINHRQK------LDRIEQEPLSFFDRVRSCY 173 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A + + +D+ S + V+ +I + Sbjct: 174 KKLASERKN-IITIDATQSLEEVSMSIYRHL 203 >gi|170726335|ref|YP_001760361.1| thymidylate kinase [Shewanella woodyi ATCC 51908] gi|169811682|gb|ACA86266.1| dTMP kinase [Shewanella woodyi ATCC 51908] Length = 210 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 111/207 (53%), Gaps = 10/207 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLL-SCGVDEF 62 FI EG+EGAGK++ ISL++ F+++ V TREPGGTP AE R ++ + D Sbjct: 8 KFIVIEGLEGAGKSSAISLVRDFIEKHTGAVPVCTREPGGTPLAERIRDLVKIADETDPL 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE ++F AAR V NVI+PAL G+ +L DR SS AYQG ++S+ Sbjct: 68 CDEAECLLFYAARAQLVANVIKPALRRGEWVLGDRHNLSSLAYQGGGRGLS-TLVESVSR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + PD TI LD+ +GL R NR LD E +++ E+ R FL A+ Sbjct: 127 ATLGDFKPDLTIYLDIEPKLGLTRAANR------GELDRIEVEEIAFFERARHTFLSYAQ 180 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 D ++D+ + V +I+ ++ Sbjct: 181 QD-DSIQVIDAGQTMAEVHKDIVALLQ 206 >gi|42522597|ref|NP_967977.1| hypothetical protein Bd1040 [Bdellovibrio bacteriovorus HD100] gi|59798302|sp|Q6MP28|KTHY_BDEBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|39575129|emb|CAE78970.1| tmk [Bdellovibrio bacteriovorus HD100] Length = 214 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 1/206 (0%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI FEG++G+GK++ ++ L+R LQ + + TREPGGTP + R+++L Sbjct: 6 KFIVFEGLDGSGKSSLMAALERELQNRAINFLRTREPGGTPLGDEIRNMILRKEGPAPTP 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +++ A+R HV+ VIRPAL G +LCDRF SS A+Q + + L + Sbjct: 66 RTELLLYEASRSQHVDQVIRPALAAGTWVLCDRFAASSVAFQSGGRAISEADVVMLNTFA 125 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + D T++LDL V+ +R Q R ++ D E + HE RQ FL +R Sbjct: 126 TGGLKADITVLLDLSVEESRRRRQGRGAVT-GETEDRIESEADTFHENVRQSFLKQSRED 184 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 ++D+ + + + +L + E Sbjct: 185 AAAWIVLDARETPEVLFKQLLQSLTE 210 >gi|251771718|gb|EES52293.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum] Length = 252 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 6/220 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG++G+GK+T LK L ++ +T+EPGGTPA R +LL + Sbjct: 39 GCLIVFEGMDGSGKSTQARRLKARLDGLSHPAVLTKEPGGTPAGARLREILLDPAL-PLA 97 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EAE +F A R HV+ ++ P L G+ +L DR ++ AYQ + +L E+ Sbjct: 98 PEAELFLFEADRAMHVKTLLLPELRAGRTVLSDRLSFATVAYQSFGGGLSRELVSTLNEV 157 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ V+PD T +LDLPV +R++ R FE E+ R+ +L++AR Sbjct: 158 ALGGVVPDVTYLLDLPVSEMARRLRERGD-----GPTRFELLGGDYFERVREGYLELARI 212 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 R ++D+ +++ I + R + S Sbjct: 213 HRGRTVVLDATRDPETLEGEIFEDLARRFPGRFATGGSPA 252 >gi|157375783|ref|YP_001474383.1| dTMP kinase [Shewanella sediminis HAW-EB3] gi|157318157|gb|ABV37255.1| dTMP kinase [Shewanella sediminis HAW-EB3] Length = 210 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 111/212 (52%), Gaps = 10/212 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL-SCGV 59 + FI EG+EGAGK++ ISL++ F+++ TREPGGTP AE R ++ + Sbjct: 5 KTSKFIVIEGLEGAGKSSAISLVRDFIEKHTGTAPVCTREPGGTPLAERMRDLVKIADES 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D EAE ++ AAR V NVI+PAL G+ +L DR SS AYQG ++ Sbjct: 65 DPLCDEAECLLLYAARAQLVANVIKPALTRGEWVLGDRHNLSSLAYQGGGRGL-MDLVEV 123 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + ++ E PD TI LD+ ++GL R +R LD E++++ E+ R FL Sbjct: 124 VSHATLGEFKPDLTIYLDIDPELGLSRAASR------GELDRIEKQELAFFERARGTFLS 177 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A D ++D+ + V +IL ++ + Sbjct: 178 FASKD-DSIAVIDAGQTMAEVHKDILALLQSM 208 >gi|15604908|ref|NP_219692.1| thymidylate kinase [Chlamydia trachomatis D/UW-3/CX] gi|8134523|sp|O84191|KTHY_CHLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|3328593|gb|AAC67780.1| Thymidylate Kinase [Chlamydia trachomatis D/UW-3/CX] gi|297748318|gb|ADI50864.1| Thymidylate kinase [Chlamydia trachomatis D-EC] gi|297749198|gb|ADI51876.1| Thymidylate kinase [Chlamydia trachomatis D-LC] Length = 203 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT I L + L + ++ TREPGG ++ R +LL + Sbjct: 1 MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F AAR H++ I PAL GK ++ DRF DS+ YQG F+ +L Sbjct: 60 YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + +PD T +LD+P GL R + LD FE+K + H R+ FL +A Sbjct: 120 VGDKPFLPDITFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHRSVREGFLALAE 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR ++D+ ++ L + L+ Sbjct: 174 KAPDRYKVLDALLPTEASVDQALLQIRALI 203 >gi|116626370|ref|YP_828526.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076] gi|116229532|gb|ABJ88241.1| thymidylate kinase [Candidatus Solibacter usitatus Ellin6076] Length = 224 Score = 217 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 1/205 (0%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG++G+GKTT + L L+ V T EPGG P A+ R ++L E Sbjct: 17 GIFITFEGMDGSGKTTQMHRLAERLRGMGRTVLETAEPGGPPIAQKIRRIVLDAANQELS 76 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE +++ A+R +V+ I+PAL G+I+L DRF DSS YQG + +L I Sbjct: 77 PTAEILLYFASRAQNVDQWIQPALARGEIVLADRFTDSSLVYQGIGRGLGADTVVALDRI 136 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + PD TI++D+ + L R + R +L + C + + + H K + +A Sbjct: 137 ACRGLKPDLTILVDVDAEASLTRARAR-NLAQPHCETRMDDQALEFHLKVHAAYHALAAA 195 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +P+R + + + I +IV Sbjct: 196 EPERVKVANGRAGMDEIEREIWSIV 220 >gi|146329656|ref|YP_001210096.1| thymidylate kinase [Dichelobacter nodosus VCS1703A] gi|172047332|sp|A5EXE3|KTHY_DICNV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|146233126|gb|ABQ14104.1| thymidylate kinase [Dichelobacter nodosus VCS1703A] Length = 203 Score = 217 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 8/210 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI +G EG+GK++ I + FLQ+ V TREPGGT EA R ++LS Sbjct: 2 RGKFICLDGTEGSGKSSQIQAICSFLQQHGKTVITTREPGGTQIGEAIRELVLSPHYQP- 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A E ++ AAR +H++ VI P L G ++ DRF D++YAYQG + +L++ Sbjct: 61 QALTELLLILAARHEHLQTVILPHLAAGTWVISDRFNDATYAYQGYGRGIDLKIIKTLEQ 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I PD IL LP I +RV NR D E ++ + Q + A+ Sbjct: 121 IIQASFQPDLACILCLPEHIAAERVHNRAHDH-----DRIELENRAFFARVAQGYHARAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +D++ SV I + + L+ Sbjct: 176 LPHARF--IDASGDQNSVFQQIRHHLELLL 203 >gi|123965393|ref|YP_001010474.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9515] gi|166223101|sp|A2BUA6|KTHY_PROM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123199759|gb|ABM71367.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9515] Length = 210 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 15/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 G FI EGI+G GKTT I + R+L + TREPGG+ + R+++L Sbjct: 2 KGKFIVIEGIDGCGKTTQIDEISRWLPTSGLMGKNSKLIKTREPGGSLLGKKLRNLILDN 61 Query: 58 G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ + AE ++++A R +HV +I PAL + ++ DRF DS+ AYQG Sbjct: 62 NKNNKPSSLAELLLYSADRAEHVSKIISPALKKEDWVISDRFSDSTLAYQGYGRHINLEI 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +++ I Q PD TI L++ + + R R++ D E + + +K + Sbjct: 122 IKNIESIVCQGEYPDLTIFLEISAEESILR-------RKNFVPDRMESEGINFLQKVNEG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F IA+ + ++ + + +++ I + + Sbjct: 175 FKLIAKE--KKWKVISATQNITAISNEIKETLLK 206 >gi|119944852|ref|YP_942532.1| dTMP kinase [Psychromonas ingrahamii 37] gi|119863456|gb|ABM02933.1| thymidylate kinase [Psychromonas ingrahamii 37] Length = 223 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 115/212 (54%), Gaps = 11/212 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLL-SCGVD 60 FI EG+EGAGK+T +S + ++L ++N D TREPGGT AE R ++ + Sbjct: 15 KFIVIEGLEGAGKSTAVSYITKWLFKQNIATCDTVYTREPGGTELAEKMRDIVKIEVTGE 74 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +AE ++ AAR+ VE++I+PAL+ GKI++ DR SS AYQG ++ + Sbjct: 75 KLDDKAELLLMYAARVQLVEHIIKPALVAGKIVVGDRHNMSSLAYQGGGRGIDLALIEVI 134 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++++ + D T+ LD+ ++GL+R + R LD ER+ + ++ R +FL + Sbjct: 135 KKLALGDFKADLTLYLDIDPELGLQRARGR------GELDRIERQAIDFFDRTRAVFLSL 188 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +++ S + V I + + V Sbjct: 189 VAKDKN-AVTINAGQSPELVEKAIFVALDKWV 219 >gi|167629308|ref|YP_001679807.1| thymidylate kinase [Heliobacterium modesticaldum Ice1] gi|167592048|gb|ABZ83796.1| thymidylate kinase [Heliobacterium modesticaldum Ice1] Length = 226 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFI+ EG +GAGKTT +LL + + Y V TREPGGTP +EAAR VLL + Sbjct: 9 GLFITLEGADGAGKTTQGALLAQAFRILGYPVVETREPGGTPVSEAARRVLLDPSLKGMV 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE ++A AR V VIRPAL G +++CDRF DS+ AYQG L ++ E+ Sbjct: 69 PMAELFLYATARAQLVSEVIRPALASGAVVICDRFTDSTLAYQGFGRGLDLEQLAAINEM 128 Query: 124 SVQE--------VMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRR 174 + + + GL R + R + +D E ++ HE+ R Sbjct: 129 ATGGLTPDLTLLLD--------IDTGEGLVRARLRRPEGTKWQGVDRMELEEAAFHERVR 180 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + FL +A R + + + V I++ LV Sbjct: 181 RGFLQLAEKDRARICPIAAGGAIAEVHRRIIDAARRLV 218 >gi|241667797|ref|ZP_04755375.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876341|ref|ZP_05249051.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842362|gb|EET20776.1| thymidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 204 Score = 217 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 65/207 (31%), Positives = 101/207 (48%), Gaps = 8/207 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 FI EG++GAGK+T I +K++L K+ TREPGGT AE R ++L DE Sbjct: 3 KFIVIEGLDGAGKSTAIGFIKKYLDSKSLAAVYTREPGGTKVAEELRSIVLHNDYDEEIH 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++E ++ A R+ H N+I PAL +G ++ DRF SS AYQG L+ L E Sbjct: 63 PDSELLMIYAGRIQHYRNLIAPALTKGVNVVSDRFYWSSIAYQGGGRELGFDKLNVLNET 122 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ PD I LD+ IGL R D E+ + ++ R +F + Sbjct: 123 FLKDCQPDLIIYLDIDPAIGLARAGK------VGSPDRIEKAGLAFFDRTRAVFKSLVAV 176 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 + +D++ S + I I+ + Sbjct: 177 NHNAYE-IDASQSIDVIEKEIYAILDK 202 >gi|148240580|ref|YP_001225967.1| thymidylate kinase [Synechococcus sp. WH 7803] gi|166223122|sp|A5GP05|KTHY_SYNPW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|147849119|emb|CAK24670.1| Thymidylate kinase [Synechococcus sp. WH 7803] Length = 213 Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 19/222 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 G F+ EGI+G GKTT + L +L + +H+TREPGGTP A R +LL Sbjct: 2 KGRFLVLEGIDGCGKTTQLRQLAEWLPDSGLMPEGATLHLTREPGGTPLGRALRELLLHP 61 Query: 58 GVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + EAE +++AA R HV+ I PAL G +L DRF S+ AYQG+ Sbjct: 62 PDEAAPCPEAELLMYAADRAQHVQRRILPALACGDWVLSDRFSGSTLAYQGDGRGLDRAL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ ++PD T+ LDL ++ + R RE D E + + Sbjct: 122 ILDLERIATAGLVPDVTLWLDLSLEASMAR-------REERTEDRIEAEGQAFLARVADG 174 Query: 177 FLDIARNQPDR-CHIVDSAHSFQSVATNILNIVW--ELVQKR 215 F +A +R + +A S + V I + +++R Sbjct: 175 FRQLAA---ERGWVGIPAALSPKEVHQAIRLALEGHAALRRR 213 >gi|242398141|ref|YP_002993565.1| probable thymidylate kinase [Thermococcus sibiricus MM 739] gi|259494284|sp|C6A0S1|KTHY_THESM RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|242264534|gb|ACS89216.1| probable thymidylate kinase [Thermococcus sibiricus MM 739] Length = 210 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 114/218 (52%), Gaps = 19/218 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--- 60 G+FI EGI+GAGK+T +L ++ + + Y+V +T+EP T + R ++L G + Sbjct: 2 GIFIVLEGIDGAGKSTQAKMLAKWFENRGYEVVLTKEPTDTAFGKLIRRLVLIGGKEGII 61 Query: 61 ---EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 EAEA++FAA R +HV+ +I P++ GK+++ DR+ SS AYQ R L L Sbjct: 62 DGARISKEAEALLFAADRAEHVKKLIEPSIKAGKVVISDRYFYSSLAYQWARG----LDL 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L ++ D I+LDLPV + R+ R E + V + +K R+ + Sbjct: 118 NWLINLNAFAPRADLVILLDLPVKESINRINGRSIRSEFDKI-------VELQKKVRKNY 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQK 214 L +A + I+++ + + +I ++ EL +K Sbjct: 171 LKLAEKFNE-IRIINALAPVEDIHNDITALIEHELFEK 207 >gi|162147582|ref|YP_001602043.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl 5] gi|209542215|ref|YP_002274444.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5] gi|161786159|emb|CAP55741.1| putative thymidylate kinase [Gluconacetobacter diazotrophicus PAl 5] gi|209529892|gb|ACI49829.1| dTMP kinase [Gluconacetobacter diazotrophicus PAl 5] Length = 215 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 79/213 (37%), Positives = 111/213 (52%), Gaps = 8/213 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+FEG EGAGK+T L+ L+ +V TREPGGTP AEA R +LL G D Sbjct: 2 AGLFITFEGGEGAGKSTQAQRLEAHLRAAGREVVRTREPGGTPGAEALRQLLLFGGHD-L 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + AAR DHV+ +IRPAL G +++CDRF+DS+ AYQG + L Sbjct: 61 SLRAEILAHFAARCDHVDQLIRPALARGAVVICDRFIDSTLAYQGYGLGRADPGILHLIA 120 Query: 123 I--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD T++L L L R++ R D +E D H + F I Sbjct: 121 VLGAQVGLAPDLTLVLMLERAGALARLRAR-----GGPADRYEAADEAFHARVADGFDTI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 AR + RC + + VA +I +V ++ Sbjct: 176 ARAEAGRCVTIAADRPVDVVAGDIARLVDARLE 208 >gi|124262780|ref|YP_001023250.1| thymidylate kinase [Methylibium petroleiphilum PM1] gi|124262026|gb|ABM97015.1| thymidylate kinase [Methylibium petroleiphilum PM1] Length = 224 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 67/219 (30%), Positives = 112/219 (51%), Gaps = 8/219 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+ ++GAGK+T + + L+ +V VTREPGG+P AE R ++L D Sbjct: 7 RGRMITLSALDGAGKSTQVQTVVERLRDYYGIEVVVTREPGGSPVAERLRELVLHG--DV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++F AAR DH+ VIRPAL G+ ++CDRF+D S+AYQ ++L+ Sbjct: 65 IDPVAEMMIFFAARQDHLAQVIRPALQAGRWVVCDRFVDCSWAYQVRGRGLARAEFEALE 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++ PD T +LD+ + A D FER+D+ + RQ + + Sbjct: 125 KMVLRGWRPDLTFLLDIEPVV-----AAARRRGRGAEADRFERQDLEFFGRVRQGYFERM 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 P+R ++D+A + V ++ + E V+ + + Sbjct: 180 VADPERFRVIDAAVAPGVVRKEVIAHLDEFVRSTLRETA 218 >gi|82701134|ref|YP_418234.1| putative thymidylate kinase [Pseudomonas phage EL] gi|82658039|emb|CAG27295.1| putative thymidylate kinase [Pseudomonas phage EL] Length = 215 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 9/214 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+F EG++G GKTT ++ + +L + DV TREPGGTP R +LLS Sbjct: 8 SGMFCVVEGLDGTGKTTVVNRITDWLVERGVDVVKTREPGGTPYCNRIRDLLLSLDEGGE 67 Query: 63 GA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G E ++F AAR+ H+E +++P+L GK +LCDR++ ++ AYQGE + L Sbjct: 68 GPCQMTELLLFNAARVQHLETLVKPSLQAGKFVLCDRYVHTTIAYQGEARGLGVGKILEL 127 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + Q+ P T ILD PV++ L RV R ++ + + V +EK R + + Sbjct: 128 HRLLTQDFWPHFTFILDAPVEVVLDRVHQR------GGMNRLDSQTVEFYEKARTAYRRM 181 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + D C ++D+ S V + + L K Sbjct: 182 GQTGRD-CALIDATVSEDEVFNQMTTYLERLCNK 214 >gi|94676700|ref|YP_588872.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|166221720|sp|Q1LT42|KTHY_BAUCH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|94219850|gb|ABF14009.1| thymidylate kinase [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 212 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 9/217 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSC-G 58 M S FI EG+EGAGKT+ I + L +++ TR+PGGTP AE R ++ Sbjct: 1 MKS-KFIVIEGLEGAGKTSVIQQIITILHSNGIHNIISTRDPGGTPLAETIRDIIKKGMN 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E ++ AAR V VI+PALM G ++ DR+ SS AYQG L Sbjct: 60 GEYITDYTELLLLYAARTQLVAQVIKPALMSGTWVISDRYDLSSQAYQGGGRGIDIRLLQ 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +L++ ++ + PD TI LDLP R++ R LD E + + ++ + Sbjct: 120 NLRDAALGKFYPDLTIYLDLPPSKCRARIRARGI-----PLDRIEMESLSFFQRTSIRYR 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ N R +D+ S + I N + ++ + Sbjct: 175 ELVAND-SRIITIDAQQSIAELNATIRNNIERWLKSQ 210 >gi|300814241|ref|ZP_07094517.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511665|gb|EFK38889.1| dTMP kinase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 202 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 108/204 (52%), Gaps = 11/204 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG +G GK+T +L+ L ++N +V TREPGGT +EA R ++L+ E Sbjct: 3 LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYREMDY 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I+PAL GK++LC+RF+ SS AYQG + + ++ E + Sbjct: 63 RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I L + L R + D ER H K R + ++ + Sbjct: 123 TMGLEPDIVFIF-LNKEETLAR--------KLENADRLERAGDDFHNKVRDFYKNLQKK- 172 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 D + +D+ S V ++ L ++ Sbjct: 173 -DNYYFIDAWQSIDKVFSDTLEVL 195 >gi|289523214|ref|ZP_06440068.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503757|gb|EFD24921.1| dTMP kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 209 Score = 216 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 14/213 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI+FEGI+G+GK+TH L L N V +TREPGG R +LL Sbjct: 3 GLFITFEGIDGSGKSTHAKRLYEHLSNIFGNERVLITREPGGWSGGSQLRDILLHSN--- 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +E +F A R +HVE I+PAL +G+I++C+R+ DS+ AYQG ++ L Sbjct: 60 WRPWSEFFLFMADRCEHVEEQIKPALAKGQIVICERYTDSTLAYQGWGKGLPLEEMERLF 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + +PD TI LD+ VD +KR++ R + D E + R+ + +++ Sbjct: 120 SL-LDFPLPDLTIWLDISVDTAMKRIKAR------SASDRLEEE--RFLAVVRRGYEELS 170 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P R V S + V I +V + + Sbjct: 171 KRNPVRIRRVFSGDEEEKVFEEIARVVEGFMDE 203 >gi|77413425|ref|ZP_00789617.1| thymidylate kinase [Streptococcus agalactiae 515] gi|77160519|gb|EAO71638.1| thymidylate kinase [Streptococcus agalactiae 515] Length = 185 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 103/192 (53%), Gaps = 7/192 (3%) Query: 23 LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV 82 +L+ L + D+ TREPGG +E RH++L + + E +++ AAR H+ Sbjct: 1 MLREKLSQ---DILTTREPGGVTISEEIRHIILDVKHTQMDKKTELLLYMAARRQHLVEK 57 Query: 83 IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDI 142 + PAL EGKI+L DRF+DSS AYQG + L + + PD T+ D+P ++ Sbjct: 58 VLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKWLNDYATDSHKPDLTLYFDVPSEV 117 Query: 143 GLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202 GL+R+Q ++ + + + +H++ RQ +L++A ++P+R +D++ V Sbjct: 118 GLERIQK----SVQREVNRLDLEQLDMHQRVRQGYLELADSEPNRIVTIDASQQLDEVIA 173 Query: 203 NILNIVWELVQK 214 +I+ + + + Sbjct: 174 ETFSIILDRINQ 185 >gi|269792630|ref|YP_003317534.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100265|gb|ACZ19252.1| thymidylate kinase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 205 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 11/213 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GLF++ EG++G+GKTT S L ++ + V TREPGG + R +LL G Sbjct: 1 MPRGLFVTIEGVDGSGKTTQASKLASWIGDQLGRRVLWTREPGG-WGDDGIREMLLKGGW 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G E ++F A R +H VI PAL EG++++C+R+ DS+ AYQ LD Sbjct: 60 Q--GPYTETLLFLADRCEHCARVIGPALEEGRVVICERYQDSTLAYQAFGSGLGLEDLDR 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + PD TI LDL + R+ +R +D E + + + R + Sbjct: 118 ISS-VLALPRPDVTIWLDLGPEEAALRLSSR------GGMDAIESRGMDFFARVRDGYRV 170 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P R V + S + V I + L+ Sbjct: 171 LWERDPSRIRRVPADGSPERVFELIKGELVRLL 203 >gi|313887553|ref|ZP_07821236.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846431|gb|EFR33809.1| dTMP kinase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 202 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG +G+GK+T +L+ L + N TREPGGT +E R ++L + E Sbjct: 4 FITFEGPDGSGKSTICNLVYDELIKNNIKTIKTREPGGTRISEKIRDIILDKDLKEMDMR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++++A+R H I PAL +G +LC+R++ SS AYQG + + ++ + + Sbjct: 64 TEALLYSASRAQHTYEKIIPALEDGVTVLCERYVLSSLAYQGHARGQKLEDIRAINDFAT 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD I R N + ++ AC D E + H+K R + ++ + Sbjct: 124 GGKKPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNNLEKE- 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 + + +D + + V + + I+ E Sbjct: 174 -ENYYFIDVNQTIEEVFGDCMKILKE 198 >gi|282855443|ref|ZP_06264764.1| dTMP kinase [Pyramidobacter piscolens W5455] gi|282586739|gb|EFB91986.1| dTMP kinase [Pyramidobacter piscolens W5455] Length = 201 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 102/206 (49%), Gaps = 9/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G+GK+T L L+R+ V T EPG P + R +LL+ + Sbjct: 1 MFITIEGIDGSGKSTQARRLAARLRREGKKVTETHEPGDWPHGDILRALLLNGRLR--HP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A R +HV VI+PAL +G+ ++CDR+ DS+ AYQ + L+SL + Sbjct: 59 MTEIMLFVADRCEHVAQVIQPALDQGEFVVCDRYNDSTRAYQCWGRGLKEDILESLIKW- 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD T+ LDLPV+ KR+ R D E +D+ HE + F ++A Sbjct: 118 CGIPEPDLTVWLDLPVEEARKRMAGR------GGSDRIEGEDLKFHEAVARGFKELAERN 171 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 R VD+ + I + + Sbjct: 172 GSRFFRVDARAGEDEIEETIFSELKR 197 >gi|289706872|ref|ZP_06503213.1| dTMP kinase [Micrococcus luteus SK58] gi|289556422|gb|EFD49772.1| dTMP kinase [Micrococcus luteus SK58] Length = 219 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 106/214 (49%), Gaps = 1/214 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLF++ EG +G+GK+T L L+ ++V +TREPGG+ E R +LL G Sbjct: 7 HRGLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPGHAP 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H +RPAL G +++ DR++DSS AYQG + +L Sbjct: 67 VDPRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++PD T+++D+ R R + E D ER+ HE R FL A Sbjct: 127 EWATDGLVPDLTVLIDVDAATAADRRDRRAAGGE-GTPDRMERETADRHEALRAAFLARA 185 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R ++D A Q + L V R Sbjct: 186 AAAPERYLVLDGALPPQELTARALARVTAQAADR 219 >gi|160898829|ref|YP_001564411.1| thymidylate kinase [Delftia acidovorans SPH-1] gi|160364413|gb|ABX36026.1| dTMP kinase [Delftia acidovorans SPH-1] Length = 228 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 109/213 (51%), Gaps = 17/213 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFISFEGI+GAGK++HI+ L + + + V +TREPGGTP AE R ++L D Sbjct: 7 AGLFISFEGIDGAGKSSHIASLAQAFRDQGRTVTLTREPGGTPLAEKLRALMLH---DAM 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA++ AAR DH+ VI PAL G+++LCDRF D+++AYQG L +L+ Sbjct: 64 DPLTEALIAFAARRDHLVQVIEPALARGEVVLCDRFTDATFAYQGAGRGFDLQPLATLER 123 Query: 123 ISVQEV--------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + P T+ DLP ++ +R+ + + D FE + + Sbjct: 124 MVQTGTAPQPDLLREPHLTLWFDLPAEVAAERLAS------ARVPDRFESEPGSFFARVA 177 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 Q + A P R +DS S +V I + Sbjct: 178 QGYAARAAAAPQRFARIDSNASRHAVWQQITQV 210 >gi|166154398|ref|YP_001654516.1| thymidylate kinase [Chlamydia trachomatis 434/Bu] gi|166155273|ref|YP_001653528.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335657|ref|ZP_07223901.1| thymidylate kinase [Chlamydia trachomatis L2tet1] gi|238687405|sp|B0B9T8|KTHY_CHLT2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238687461|sp|B0BBG8|KTHY_CHLTB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|165930386|emb|CAP03879.1| thymidylate kinase [Chlamydia trachomatis 434/Bu] gi|165931261|emb|CAP06833.1| thymidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 203 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT I L + L + ++ TREPGG ++ R +LL + Sbjct: 1 MFIVVEGGEGAGKTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F AAR H++ I PAL GK ++ DRF DS+ YQG F+ +L Sbjct: 60 YAELLLFLAARAQHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHV 119 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + +PD +LD+P GL R + LD FE+K + H+ R+ FL +A Sbjct: 120 VGDKPFLPDIIFLLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAE 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR ++D+ ++ L + L+ Sbjct: 174 KAPDRYKVLDALLPTEASVDQALLQIRALI 203 >gi|312623182|ref|YP_004024795.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002] gi|312203649|gb|ADQ46976.1| thymidylate kinase [Caldicellulosiruptor kronotskyensis 2002] Length = 208 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 111/212 (52%), Gaps = 8/212 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG +G+GKTT + ++++L+ K Y V TREPGGT R +LL Sbjct: 1 MRMGKLIVFEGNDGSGKTTQLVKVEKYLKEKGYKVLTTREPGGTEVGYRIRKLLLDPQY- 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++ AA R +HV+NV+ PAL EG I+LCDR++ SS YQG + L Sbjct: 60 KMDGLTEALLLAADRNEHVKNVLIPALDEGYIVLCDRYILSSVVYQGIVRGVGVENILRL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + PD I+L L +I L+R++ + D + +D+ H F ++ Sbjct: 120 NSIFEDRIKPDLYIVLTLEPEIALQRIK------MAGKNDKLDLEDLEFHRLVYSGFKEV 173 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ +RC +++ S + V +L + +L+ Sbjct: 174 SKWF-ERCVNIEAQGSEKEVFEKVLLEIEKLL 204 >gi|94496389|ref|ZP_01302966.1| Thymidylate kinase [Sphingomonas sp. SKA58] gi|94424135|gb|EAT09159.1| Thymidylate kinase [Sphingomonas sp. SKA58] Length = 208 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 81/212 (38%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FIS EG EGAGK+T + L R L+ + DV TREPGG+ AEA R +LL+ G D Sbjct: 1 MTTGRFISLEGGEGAGKSTQLRALARTLRERGLDVLETREPGGSDGAEAIRTLLLTGGAD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + AEA++FAAAR DH+E IRPAL G +L DRFLDSS AYQG+ + S + +L Sbjct: 61 RWSPRAEALLFAAARADHIEKTIRPALARGAWVLSDRFLDSSRAYQGQGELSDSDIV-AL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I + +PD T++L LP + +R R+ +D +D H F Sbjct: 120 HRIGSADFLPDRTLVLTLPDAV----AADRARARDGDHVDRIGGRDSRFHHAVADAFARF 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A + +R +D++ + ++V +++ + +L+ Sbjct: 176 AAQESERVRAIDASGTTEAVTQRLVDALADLL 207 >gi|282882208|ref|ZP_06290847.1| dTMP kinase [Peptoniphilus lacrimalis 315-B] gi|281297973|gb|EFA90430.1| dTMP kinase [Peptoniphilus lacrimalis 315-B] Length = 202 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 68/204 (33%), Positives = 109/204 (53%), Gaps = 11/204 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF++FEG +G GK+T +L+ L ++N +V TREPGGT +EA R ++L+ E Sbjct: 3 LFVTFEGADGVGKSTIANLIYEELLKRNIEVIKTREPGGTRISEAIRDIILNNSYKEMDY 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA+++AA+R HVE I+PAL GK++LC+RF+ SS AYQG + + ++ E + Sbjct: 63 RCEALLYAASRAQHVEEKIKPALKSGKVVLCERFVLSSLAYQGIGRNQNLDHIKAINEYA 122 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I L + L LR+ D ER H K R + ++ + Sbjct: 123 TMGLEPDIVFIF-LNKEETL--------LRKLENADRLERAGDDFHNKVRDFYKNLQKK- 172 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 D + +D+ S V ++ L ++ Sbjct: 173 -DNYYFIDAWQSIDKVFSDTLEVL 195 >gi|294011646|ref|YP_003545106.1| dTMP kinase [Sphingobium japonicum UT26S] gi|292674976|dbj|BAI96494.1| dTMP kinase [Sphingobium japonicum UT26S] Length = 213 Score = 215 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 83/211 (39%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FIS EG EGAGK+T + L L+ + DV TREPGG+ AEA R +LL+ G D Sbjct: 7 TRGRFISLEGGEGAGKSTQLRALAAALRARGLDVVETREPGGSEGAEAIRALLLTGGADR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + AEA++FAAAR DHVE IRPAL G +L DRFLDSS AYQG + L +L Sbjct: 67 WSPRAEALLFAAARADHVEKTIRPALERGAWVLSDRFLDSSRAYQGMGALTDADIL-ALH 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I +PD T+ L LP + R ++R + D +D H F A Sbjct: 126 RIGSDGFLPDRTLFLTLPEEEASARARSR----DGDAADRIGGRDRDFHLAVSTAFHRFA 181 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R VD++ +V ++ V +L+ Sbjct: 182 AQEPTRFLAVDASGEAGAVTARLIEAVRDLL 212 >gi|111225913|ref|YP_716707.1| thymidylate kinase (dTMP kinase) (partial match) [Frankia alni ACN14a] gi|111153445|emb|CAJ65203.1| Thymidylate kinase (dTMP kinase) (partial match) [Frankia alni ACN14a] Length = 679 Score = 215 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 15/233 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLF++ EG EGAG++T + LL+ +L +V VT GGT R +L Sbjct: 447 HAGLFVAVEGAEGAGRSTQVELLRTWLAASGREVVVTSGSGGTTTGARLRELLFDPST-R 505 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A EA++ AA R +HV VI PAL G I++ DR++DS A+Q S L L Sbjct: 506 LHARTEALLAAADRAEHVSRVIEPALARGAIVITDRYVDSWIAFQCASRSVDAAELAVLA 565 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE---------- 171 + + ++PD T++LDL D+G++R E A E + E Sbjct: 566 QWATHALVPDLTVLLDLSADLGMQRRPAGEPAAEPAEESVDEPAEESFREPVDEAGAELL 625 Query: 172 ----KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 + R FL +A+ +P R VD+ + + I +V V++R PL Sbjct: 626 AYRSRVRDGFLRLAQGEPARYLTVDANRPREEIHAEIRAVVASRVERRAVPLG 678 >gi|317968090|ref|ZP_07969480.1| thymidylate kinase [Synechococcus sp. CB0205] Length = 214 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 100/206 (48%), Gaps = 15/206 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLS 56 G F+ EGI+G GKTT I LK++L + + VTREPGGT +A R +LL Sbjct: 3 RRGRFLVLEGIDGCGKTTQIEALKQWLPSSGLMPEGAQLLVTREPGGTALGQALRQLLLH 62 Query: 57 CGVDEFGAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 D E +++AA R HV+ I PAL G +L DRF+ S+ AYQG Sbjct: 63 PPGDAAPESTAELLLYAADRAQHVQQRIAPALEAGHWVLSDRFVGSTAAYQGYGRGLSLA 122 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ L I+ + PD T++L++P+ L+R +R + D E + Sbjct: 123 LIEQLAGIATAGLEPDLTVLLEIPLAESLRRRGHRPA-------DRIEASGEAFLARVCA 175 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVA 201 F +A+ ++++ S ++V+ Sbjct: 176 GFTALAQQYG--WCRIEASQSPEAVS 199 >gi|239916913|ref|YP_002956471.1| thymidylate kinase [Micrococcus luteus NCTC 2665] gi|281414632|ref|ZP_06246374.1| thymidylate kinase [Micrococcus luteus NCTC 2665] gi|239838120|gb|ACS29917.1| thymidylate kinase [Micrococcus luteus NCTC 2665] Length = 219 Score = 214 bits (547), Expect = 5e-54, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 1/214 (0%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLF++ EG +G+GK+T L L+ ++V +TREPGG+ E R +LL Sbjct: 7 HRGLFVAVEGPDGSGKSTQARALTEALRAAGHEVVLTREPGGSDLGETLRELLLDPEHAP 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA++FAAAR H +RPAL G +++ DR++DSS AYQG + +L Sbjct: 67 VDPRTEALLFAAARSAHAVRTLRPALARGAVVVTDRYVDSSVAYQGAARGLGEARIAALN 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + ++PD T+++D+ R R + E D ER+ HE R FL A Sbjct: 127 EWATDGLVPDLTVLIDVDAATAADRRDRRAAGGE-GAPDRMERETADRHEALRAAFLARA 185 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R ++D A Q + L V R Sbjct: 186 AAAPERYLVLDGALPPQELTARALARVTAQAADR 219 >gi|71894076|ref|YP_278184.1| thymidylate kinase [Mycoplasma synoviae 53] gi|123644541|sp|Q4A6Z8|KTHY_MYCS5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71850864|gb|AAZ43473.1| thymidylate kinase [Mycoplasma synoviae 53] Length = 214 Score = 214 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 11/209 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT I+ L + L+ K D +TREPGG +E R ++L ++ Sbjct: 1 MFITFEGLDGSGKTTVINELLKKLKDNFKFLDYVLTREPGGKDIKESEKIREMILDSDLE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F EA+++ +R H++ VI PAL + KI+ CDR+ DS YAYQG + F +L Sbjct: 61 -FSPITEALLYTTSRRIHIDKVILPALAQNKIVFCDRYYDSFYAYQGYGRNLGMEFTKTL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++V + +P+ T D+ KR + D E +D+ H + + +L+I Sbjct: 120 TELAVGKTIPNLTFFFDISPFETRKR-----RSENNLINDRLELEDLSFHNRVYEGYLEI 174 Query: 181 ARNQPD-RCHIVDSAHSFQSVATNILNIV 208 +N + R +VD+ + I N + Sbjct: 175 IKNNKENRFVVVDATKPVNEIVDFIFNYL 203 >gi|289643672|ref|ZP_06475784.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] gi|289506505|gb|EFD27492.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] Length = 917 Score = 214 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 65/163 (39%), Positives = 90/163 (55%), Gaps = 4/163 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLFI+ EG EG+GK+T + L+ +L +V VTREPGGT R +LL Sbjct: 506 HAGLFIALEGGEGSGKSTQVERLRSWLASSGREVVVTREPGGTALGVKLRELLLDPAA-R 564 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA+++AA R +HV VI PAL G I++ DRF+DSS AYQG + L Sbjct: 565 LHPRTEALLYAADRAEHVSRVIEPALARGAIVVSDRFIDSSIAYQGAGRQLGADDIAMLS 624 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS---LRESACLDY 161 + + ++PD TI+LD+P GL RV+ R S R D Sbjct: 625 RWATRSLLPDVTILLDIPARTGLARVRARASGNGSRHERPTDR 667 Score = 83.2 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 30/57 (52%) Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +D E +++ HE+ R F +A PDR ++D+ S +V I N+V +++ Sbjct: 732 GVDRIEAEELSFHERVRDGFRQLAERTPDRYVVLDADRSPDTVHNQIRNVVTGYLRR 788 >gi|226226593|ref|YP_002760699.1| thymidylate kinase [Gemmatimonas aurantiaca T-27] gi|226089784|dbj|BAH38229.1| thymidylate kinase [Gemmatimonas aurantiaca T-27] Length = 237 Score = 214 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 70/221 (31%), Positives = 106/221 (47%), Gaps = 14/221 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF+ EG EG GKTT + L L+ ++V REPGGT A +A R +LL Sbjct: 14 GLFVVLEGGEGVGKTTQWNRLASALRAVGHEVVAVREPGGTQAGDAIRTLLLDP-TSSLS 72 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++FAA+R V +V+ PAL G ++L DRFL S+YAYQG L S+ + Sbjct: 73 PGTEALLFAASRAQLVADVVEPALARGAVVLVDRFLLSTYAYQGAGRGLPLDMLSSVNRL 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 + PD T++L++P+D+ + RVQ R D E +D H + + F+ Sbjct: 133 ATGGRAPDLTLLLNVPLDLAMARVQAR------GAADRMELEDAAFHVRVQAAFVAALSS 186 Query: 180 -IARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + P+ V + +V L + + R + Sbjct: 187 TWQQAHPEIGPVIAVPAQGDIDTVTVRCLEALVQRWPARFT 227 >gi|113955289|ref|YP_731781.1| thymidylate kinase [Synechococcus sp. CC9311] gi|123327571|sp|Q0I6Z1|KTHY_SYNS3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|113882640|gb|ABI47598.1| thymidylate kinase [Synechococcus sp. CC9311] Length = 212 Score = 214 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 15/211 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCG 58 G + EGI+G GKTT + L +L + + VTREPGGT + R +LL Sbjct: 2 GRLLVLEGIDGCGKTTQLQQLSSWLPKSGLMPDESRLVVTREPGGTALGTSLRQLLLHPP 61 Query: 59 VD-EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D + G AE +++AA R HV+ VI+PAL G +L DRF S+ AYQG + Sbjct: 62 QDADPGPTAELLLYAADRAQHVDRVIQPALERGDWVLSDRFTGSTMAYQGYGRGLNRELI 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L+ I+ + + PD T+ LD+P+ + ++R R S D E + + E+ + F Sbjct: 122 TDLERIATRGLTPDMTVWLDIPLALSVQR-------RGSREEDRIEAEGLAFLERVSEGF 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D+ + + V + VA I + Sbjct: 175 SDMCKARD--WVSVVADRPLLEVAEAIQTAL 203 >gi|220903414|ref|YP_002478726.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254808288|sp|B8J2G0|KTHY_DESDA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219867713|gb|ACL48048.1| dTMP kinase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 217 Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats. Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 25/224 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEGIEGAGK+T I L +LQ + +D +TREPGG+ R +LL + Sbjct: 1 MFVTFEGIEGAGKSTAIDYLSDYLQARGHDPVLTREPGGSALGRRLRALLLDVRTGGLAS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R HV VIRPAL G+++LCDRF DS+ AYQG +L SL + Sbjct: 61 RAELFLFLADRAQHVTEVIRPALEAGQVVLCDRFTDSTLAYQGYGRGLDTEYLRSLNTAA 120 Query: 125 VQE------------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 V GL+R R + F+ + + HE Sbjct: 121 TGGLEPDLTLLLDLPVR------------CGLERAGERNRSAGMVIAEGRFDSESLDFHE 168 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R+ + +A +P+R I+D++ + V + + +++R Sbjct: 169 RVRRGYRALAEEEPERFAIIDASQPPEDVVLQCRSAIEAYLRRR 212 >gi|313672881|ref|YP_004050992.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672] gi|312939637|gb|ADR18829.1| thymidylate kinase [Calditerrivibrio nitroreducens DSM 19672] Length = 214 Score = 214 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 4/208 (1%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 + +GI+G GKTT I LL +L N +VT+EPGGT R +L+S E E Sbjct: 7 AIDGIDGCGKTTQIKLLSDYLAGLNIPFYVTKEPGGTDVGGILRKILISKDY-HVEPETE 65 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 ++++A RL+H + V+ P + +G ++ DRF+ S+YAYQ LD L+ ISV Sbjct: 66 LLLYSADRLEHQKKVVIPNMHKGYSVISDRFISSTYAYQVFGRGLDRSLLDFLRNISV-S 124 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARNQPD 186 + PD TII+D+ + L+R +NR + FE ++ + K R FL A N + Sbjct: 125 IYPDLTIIIDIEPSVALERAKNRLKKHGLMEKEGKFESLNIDFYAKVRDGFLWYADNFSN 184 Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214 ++D S +S+ +I N + E + Sbjct: 185 -VVVLDGNKSIESLFGDIKNRINEFIND 211 >gi|148259980|ref|YP_001234107.1| dTMP kinase [Acidiphilium cryptum JF-5] gi|326403065|ref|YP_004283146.1| thymidylate kinase [Acidiphilium multivorum AIU301] gi|146401661|gb|ABQ30188.1| thymidylate kinase [Acidiphilium cryptum JF-5] gi|325049926|dbj|BAJ80264.1| thymidylate kinase [Acidiphilium multivorum AIU301] Length = 210 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 9/213 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ G+FI+ EG EGAGK+T I+ L L+ ++V TREPGGTP AEA R ++L Sbjct: 1 MSRQGVFITLEGGEGAGKSTQIARLAARLRAAGHEVLTTREPGGTPGAEAIRALMLDPA- 59 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F A+ ++ AAR DHV +IRPAL G ++LCDRF DS+ AYQG + + Sbjct: 60 RHFAPLADTLLVFAARADHVAAIIRPALEHGAVVLCDRFTDSTMAYQGHGLGVDRAAIAT 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L ++ PD T+ILDLP I R+ +R D +E+ D + F Sbjct: 120 L--GAMIGATPDLTLILDLPDAIARARLAHR-----GGAADRYEQFDTGFAIRVADGFRA 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 IA +PDRC +VD+A + V + ++ + Sbjct: 173 IAAAEPDRCVLVDAAGGIEDVTETLAGLIRARL 205 >gi|88807102|ref|ZP_01122614.1| Thymidylate kinase [Synechococcus sp. WH 7805] gi|88788316|gb|EAR19471.1| Thymidylate kinase [Synechococcus sp. WH 7805] Length = 213 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 15/213 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 +G F+ EGI+G GKTT + L +L +H+TREPGGTP A R +LL Sbjct: 2 TGRFLVLEGIDGCGKTTQLRQLADWLPGSGLMPDGATLHLTREPGGTPLGRALRELLLHP 61 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 EAE +++AA R HV+ I PAL G +L DRF S+ AYQG Sbjct: 62 PDAAAPCPEAELLMYAADRAQHVQRRILPALKCGDWVLSDRFSGSTVAYQGHGRGLDQSL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ ++PD T+ LDLP++ + R R D E + + Sbjct: 122 ILDLERIATAGLVPDVTLWLDLPLEASIAR-------RGDRAEDRIEAEGQAFLGRVANG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 F +A + + + S + V I + Sbjct: 175 FRVLAAERD--WVGIPADLSPEEVQRTIRLALE 205 >gi|123351693|ref|XP_001295357.1| thymidylate kinase family protein [Trichomonas vaginalis G3] gi|121874114|gb|EAX82427.1| thymidylate kinase family protein [Trichomonas vaginalis G3] Length = 202 Score = 214 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+FEG +G+GK+T +L+ L + N + TREPGGT +E R ++L ++E Sbjct: 4 FITFEGPDGSGKSTICNLVYDELIKNNIETIKTREPGGTRISEKIRDIILDKDLNEMDMR 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA++++A+R H I PAL +G +LC+R++ SS AYQG + + ++ + + Sbjct: 64 TEALLYSASRAQHTYEKIIPALEDGITVLCERYVLSSLAYQGHARGQKLEDIRAINDFAT 123 Query: 126 QEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD I R N + ++ AC D E + H+K R + D+ + Sbjct: 124 GGKNPDIVFIF---------RTNNSTLTRKDQACYDRLECEGDDFHKKVRDYYNDLEKE- 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 + +D + + V + + I+ E Sbjct: 174 -GNYYFIDVNQTIEEVFGDCMKILKE 198 >gi|33864255|ref|NP_895815.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9313] gi|46576455|sp|Q7V4G2|KTHY_PROMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33641035|emb|CAE22164.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9313] Length = 216 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 19/223 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 SG F+ EGI+G GKTT + L +L R + +H+TREPGGT A R ++L Sbjct: 2 SGRFLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGIALRKLVLHP 61 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G AE +++AA R HV +IRPAL +G +L DRF S+ AYQG Sbjct: 62 PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L++I+ ++PD T L+LPV+ L R R + D E + V + Sbjct: 122 IQQLEQIATAGLVPDLTFWLELPVEESLLRRDARSN-------DRIEAEGVDFLTRVATG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 F +AR + + + +SV+ + + ++ PL Sbjct: 175 FAVLARERS--WVPLQADQQVESVS----SALESQLKHHFGPL 211 >gi|326562040|gb|EGE12369.1| thymidylate kinase [Moraxella catarrhalis 46P47B1] gi|326564967|gb|EGE15168.1| thymidylate kinase [Moraxella catarrhalis 12P80B1] gi|326573572|gb|EGE23534.1| thymidylate kinase [Moraxella catarrhalis CO72] Length = 206 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG EG GKTT I L L + V TREPGG+ AE R + L+ + Sbjct: 2 QGKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNTN-M 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQ 121 A+ E ++ AAR DH+ VI PA+ GK ++ DRF DS+ AYQG + L ++ Sbjct: 61 NADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIE 120 Query: 122 EISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + Q + PD T+ LDL V +G++R R + D E D+ E+ Q Sbjct: 121 LLIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAY 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +R H +D+ + VA I + Sbjct: 175 QHSQHSNRIHRIDANGTVAEVAARIDTAL 203 >gi|158312172|ref|YP_001504680.1| dTMP kinase [Frankia sp. EAN1pec] gi|158107577|gb|ABW09774.1| dTMP kinase [Frankia sp. EAN1pec] Length = 709 Score = 213 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 25/245 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GLFI+ EG GAGKTT + LL+ +L +V E GT R LL + Sbjct: 466 HGGLFITVEGAAGAGKTTQLELLRSWLSSSGREVVPAYETDGTSLGAGLRD-LLDDPANR 524 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A E ++ AA R +HV VI PAL G I+L DR++DS+ A Q L L Sbjct: 525 LHARTELLLDAADRAEHVARVIEPALARGAIVLTDRYVDSAIACQALGQRIDSDELTVLT 584 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD------------------YFE 163 + + ++PD TI+LDLP + L R + L + D + Sbjct: 585 QWASHSLLPDVTILLDLPAEQALARGGSDPHLGRESEGDGSGHDGGAGRGGGAGHGAGPD 644 Query: 164 RKD------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R V H + R+ F +A PDR I+D+ S Q + I ++ ++ ++ Sbjct: 645 RSGTDPVAAVAYHRRVREHFRRLADEDPDRHVILDATLSPQELHRQIRAVIAGRLRPAIT 704 Query: 218 PLSSK 222 + Sbjct: 705 GDDPR 709 >gi|323136277|ref|ZP_08071359.1| thymidylate kinase [Methylocystis sp. ATCC 49242] gi|322398351|gb|EFY00871.1| thymidylate kinase [Methylocystis sp. ATCC 49242] Length = 226 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 93/220 (42%), Positives = 127/220 (57%), Gaps = 2/220 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T ++ L L+ + +V TREPGGTP AE R VLLS + Sbjct: 9 RGRFITFEGGEGAGKSTQLARLSEHLRGRGIEVVATREPGGTPKAEKLREVLLSGRIAPL 68 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G AEA +FAAAR+DHVE++I PAL G +L DRF DS+ AYQG R + L+ Sbjct: 69 GPLAEAALFAAARIDHVESLIAPALARGAWVLSDRFADSTRAYQGARGGVDDASISLLER 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ V PD TIILDLP GL + D FE ++ + HE+ R+ FLDIA Sbjct: 129 AAIGNVRPDLTIILDLPPQEGL--ARAASRRAAGVAPDRFEAEEELFHEELRRAFLDIAE 186 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 +P+RC +V+ A + VA I +V R+ +++ Sbjct: 187 QEPERCCVVNGALAADEVAQAIRQLVDARFLSRLGEAAAE 226 >gi|296112464|ref|YP_003626402.1| thymidylate kinase [Moraxella catarrhalis RH4] gi|295920158|gb|ADG60509.1| thymidylate kinase [Moraxella catarrhalis RH4] gi|326561596|gb|EGE11935.1| thymidylate kinase [Moraxella catarrhalis 7169] gi|326565335|gb|EGE15514.1| thymidylate kinase [Moraxella catarrhalis 103P14B1] gi|326568044|gb|EGE18134.1| thymidylate kinase [Moraxella catarrhalis BC7] gi|326570576|gb|EGE20614.1| thymidylate kinase [Moraxella catarrhalis BC1] gi|326570735|gb|EGE20761.1| thymidylate kinase [Moraxella catarrhalis BC8] gi|326577357|gb|EGE27243.1| thymidylate kinase [Moraxella catarrhalis 101P30B1] gi|326577843|gb|EGE27710.1| thymidylate kinase [Moraxella catarrhalis O35E] Length = 206 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 10/209 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FISFEG EG GKTT I L L + V TREPGG+ AE R + L+ + Sbjct: 2 QGKFISFEGTEGVGKTTAIEALITRLVDRGIQVVRTREPGGSELAEQLRQLFLNPNAN-M 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQ 121 A+ E ++ AAR DH+ VI PA+ GK ++ DRF DS+ AYQG + L ++ Sbjct: 61 NADTEILLMFAARSDHLHQVILPAIKSGKWVVSDRFFDSTVAYQGFGRYHGKQAALAKIE 120 Query: 122 EISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + Q + PD T+ LDL V +G++R R + D E D+ E+ Q Sbjct: 121 LLIEQFVPIYPDVTLWLDLDVVMGMQRAAKR------SAADRLEANDIAFFERVYQGLAY 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +R H +D+ + VA I + Sbjct: 175 QHSQHSNRIHRIDANGTVAEVAARIDTAL 203 >gi|312880075|ref|ZP_07739875.1| thymidylate kinase [Aminomonas paucivorans DSM 12260] gi|310783366|gb|EFQ23764.1| thymidylate kinase [Aminomonas paucivorans DSM 12260] Length = 211 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 14/213 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGV 59 GLF++ EGI+G GK+T L +L+ ++ V TREPGG P R +L Sbjct: 5 KEGLFLTLEGIDGCGKSTQAGRLASWLRERDPRRPVLWTREPGGWPGGADFRERILRGQW 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +E +F A R +HV I PAL G+ +LC+R+ DS+ AYQ L++ Sbjct: 65 E--HPWSEVFLFLADRCEHVLREILPALARGEQVLCERYHDSTLAYQSFGRGLP---LEA 119 Query: 120 LQEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L+ S + +P T++LDLPV+ L+R+Q R D E + E+ R+ F Sbjct: 120 LRRFSRDCRFPLPHRTLLLDLPVEDALRRLQQRE-----GAADRLEGEGRPFLERVRRGF 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 L +A +P+R +VD+ + V + V E Sbjct: 175 LCLAEAEPERYAVVDARGDEEQVFARLCRAVEE 207 >gi|87310761|ref|ZP_01092888.1| thymidylate kinase [Blastopirellula marina DSM 3645] gi|87286518|gb|EAQ78425.1| thymidylate kinase [Blastopirellula marina DSM 3645] Length = 205 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 104/211 (49%), Gaps = 9/211 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F F+G++G GK+T +L +L+ + V R+PG TP E R +LL E Sbjct: 1 MFFVFDGLDGVGKSTQQTLFTAWLEMQGAKVVSCRDPGSTPLGERLRSILLDKSDLEIAP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E +++ AR V IRPAL G ++ DR+L ++ AYQG + ++ + Sbjct: 61 RSEMLLYMTARAQLVAETIRPALEAGAAVVSDRYLLANIAYQGYGGGVDVDTIRNVGLAA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V+PD T +LDLP L R+ + LD E + + E+ R+ FL A+ Sbjct: 121 TDGVLPDATFLLDLPTKAALGRL--------NRALDRVESRGIEYFEQVREGFLAEAKKF 172 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + HI+D++ + + I I ++++R Sbjct: 173 -ENVHIIDASRKVEEIQAEIRRIALTVLERR 202 >gi|260893950|ref|YP_003240047.1| thymidylate kinase [Ammonifex degensii KC4] gi|260866091|gb|ACX53197.1| thymidylate kinase [Ammonifex degensii KC4] Length = 202 Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 105/212 (49%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EGI+G GKTT +L + L+ + +V REPGGT EA R +L +E Sbjct: 2 RGFFIVLEGIDGVGKTTQARILAQKLREQGREVVEVREPGGTRLGEAIRELLQK---EEL 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AEA +F A+R VE VI+PAL +GK+++ DRF S+ AYQG + L L Sbjct: 59 APWAEACLFLASRAQLVEEVIKPALAKGKVVVGDRFSLSTLAYQGA-LGLEPDKLAQLNS 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T+++DL + L R + L E R+ +L++A+ Sbjct: 118 WVTGGLEPDLTLVIDLKAEEALARGKGDLREEIRQKL-----------EIVRERYLNLAK 166 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +VD S + V+ I +V E + + Sbjct: 167 ERAAKVLVVDGQGSVEEVSRRIWALVEEALAR 198 >gi|194246765|ref|YP_002004404.1| Thymidylate kinase [Candidatus Phytoplasma mali] gi|193807122|emb|CAP18560.1| Thymidylate kinase [Candidatus Phytoplasma mali] Length = 208 Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FISFEG EG GKT L++ L KNY +T+EPGG + + +LL+ + Sbjct: 1 MFISFEGCEGTGKTVLSKKLEKKLIEKNYLTILTKEPGGCLQTQPIKKILLNSSFKKLHC 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E++++AA R++H+ +I P+L + KI++CDRFLDSS AYQG + + + + Sbjct: 61 YTESLLYAADRIEHLNRIIIPSLQQKKIVICDRFLDSSVAYQGYGRNLGEELIYKINFYA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ + PD T +D+ IG++R++N LD F+ + + HE+ R+ +L+I + Sbjct: 121 LKYL-PDITFYIDIDPFIGVQRIKN----FRKEKLDNFDLEKMDFHERVREGYLNIFKKN 175 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R ++D S +++ T I V + + +V Sbjct: 176 KSRIILIDGNQSLENIFTIIYQKVIKFLNIKV 207 >gi|167855936|ref|ZP_02478684.1| thymidylate kinase [Haemophilus parasuis 29755] gi|167852930|gb|EDS24196.1| thymidylate kinase [Haemophilus parasuis 29755] Length = 208 Score = 212 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61 G FI EG+EGAGK+ ++ L + TREPGGTP AEA R++ + Sbjct: 2 RGKFIVIEGLEGAGKSNAQRVVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEH 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR VE VI PAL GK ++ DR SS AYQG +D + Sbjct: 62 TTDKAEVLMIYAARTQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGL-AELVDEVG 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + PD TI LD+ IGL+R + R LD E+ D+ + R+ ++ + Sbjct: 121 SVILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLV 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ P + ++++ + + V+ +I V + Sbjct: 175 KDNP-KAVLINAEPAIEQVSADIQQAVEIFL 204 >gi|190573065|ref|YP_001970910.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a] gi|190010987|emb|CAQ44596.1| putative thymidylate kinase [Stenotrophomonas maltophilia K279a] Length = 221 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 22/220 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 F+S EG EGAGKTT I+ ++ L+ ++V +TREPGGTP AE R ++L + Sbjct: 10 RFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAE 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEAE ++ AAR HV VI+PAL G +L DRF DSSYAYQG ++ L Sbjct: 70 PLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADL 129 Query: 121 QEISV------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +V ++ D+ V +G R R D E + ++ R Sbjct: 130 ERRAVGLLPGLTLLL-------DVDVAVGRARANGRDL-----WPDRIESEQDDFFQRVR 177 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++F A+ P R ++D+ VA +++ V +Q Sbjct: 178 EVFRSRAQQDPQRFALIDAGQEQARVAADVVARVERWLQD 217 >gi|117925167|ref|YP_865784.1| thymidylate kinase [Magnetococcus sp. MC-1] gi|171460782|sp|A0L8T5|KTHY_MAGSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|117608923|gb|ABK44378.1| thymidylate kinase [Magnetococcus sp. MC-1] Length = 210 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 74/217 (34%), Positives = 106/217 (48%), Gaps = 25/217 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG EGAGK+T I+ L + LQ V TREPGG P +E R +L++ D+ Sbjct: 2 QGRFITFEGGEGAGKSTQIAQLTQSLQAHGVKVLCTREPGGCPISERIREILVTGQGDDL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ AAR +H+ VIRPAL G +LCDRF DS+ AYQG +L L + Sbjct: 62 DGTSELLLILAARHEHIRQVIRPALASGHWVLCDRFEDSTLAYQGGGRGGDGPWLRQLGQ 121 Query: 123 ISVQEVMPDCTIILDL----------PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 D+ +GL R + R + FE++ + H++ Sbjct: 122 WIRG----------DVFPDLTLLLDLDPTVGLARSKRRGGQEQ-----RFEQEALSFHQQ 166 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 RQ FL +A+ +P R +D+ Q VA I V Sbjct: 167 VRQAFLQMAQQEPQRMIPIDADQPVQMVAATIWREVE 203 >gi|260655331|ref|ZP_05860819.1| dTMP kinase [Jonquetella anthropi E3_33 E1] gi|260629779|gb|EEX47973.1| dTMP kinase [Jonquetella anthropi E3_33 E1] Length = 200 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 11/206 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G GK+T +LL L + DV TREPGG P A R +LL G+ G+ Sbjct: 1 MFITLEGIDGCGKSTQAALLANLLAER-RDVVRTREPGGWPEGGALRELLLHGGL--CGS 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A R +H VI PAL G+ ++C+R+ DS+ AYQ +++L + Sbjct: 58 WTEVLLFVADRCEHASKVILPALRRGETVICERYNDSTLAYQCWGRGLDREKVEALIDW- 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 P+ T+ DLPV++ L R +R D FE +++ H + Q F +++R + Sbjct: 117 CGLPQPEVTLWFDLPVELALSRRASR------GGCDRFEAQELAFHRRIAQGFAELSR-E 169 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 R +D A S V ++N + + Sbjct: 170 TGRIVRIDGAQSEADVTEQMVNALRQ 195 >gi|288818972|ref|YP_003433320.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6] gi|288788372|dbj|BAI70119.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6] gi|308752557|gb|ADO46040.1| thymidylate kinase [Hydrogenobacter thermophilus TK-6] Length = 199 Score = 212 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 104/211 (49%), Gaps = 14/211 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GKTT +LL +L+ K + + R+PG TP AE R +++S Sbjct: 2 KGFLITLEGIDGSGKTTQANLLYEYLRSKGHKASLYRDPGSTPLAEKIRELIMSFS---L 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F AR V I P L +G +++ DRF+DS+ AYQG ++ L Sbjct: 59 DPITELLLFETARSSLVWEKILPDLQKGNVVIVDRFIDSTVAYQGYGREINLGTVNVLNH 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ + PD T IL +P+++ L R+ + FE D K R + I Sbjct: 119 IATRGRKPDLTFILHVPLEVALSRIGKDKT--------KFE--DKDFLRKVRDAYFLIQS 168 Query: 183 NQPDR-CHIVDSAHSFQSVATNILNIVWELV 212 ++ +R +++D+ + V I+ IV + Sbjct: 169 SEKERQIYLIDANREKEEVFKEIVKIVESRL 199 >gi|15616958|ref|NP_240171.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681711|ref|YP_002468097.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682266|ref|YP_002468650.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11132949|sp|P57434|KTHY_BUCAI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|25288281|pir||A84971 dTMP kinase (EC 2.7.4.9) [imported] - Buchnera sp. (strain APS) gi|10039023|dbj|BAB13057.1| thymidylate kinase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621999|gb|ACL30155.1| thymidylate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624554|gb|ACL30709.1| thymidylate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 212 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 9/218 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-G 58 M FI EG+EGAGKT +K L++ + V + R+PG TP AE R ++ Sbjct: 1 MIKSKFIVIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFN 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D E E ++ AAR+ VE I+PAL G ++ DR SS AYQG + Sbjct: 61 DDNLIKETELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIY 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 LQ + + +PD TI LD+ +IGL R R LD E + + +K R+ +L Sbjct: 121 QLQSLFLNNFIPDLTIYLDVSPEIGLARALKR------NPLDLIESRSLFFFKKTRRCYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + ++ I+++ + + V NI + + K+V Sbjct: 175 EKSKLDKKTI-IINANLNIKKVTQNITKKMLNWLNKQV 211 >gi|319943555|ref|ZP_08017837.1| thymidylate kinase [Lautropia mirabilis ATCC 51599] gi|319743370|gb|EFV95775.1| thymidylate kinase [Lautropia mirabilis ATCC 51599] Length = 230 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 65/226 (28%), Positives = 110/226 (48%), Gaps = 14/226 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEGI+GAGK+TH+ +L+ + V ++REPGG+P AE R +E Sbjct: 8 QGCFITFEGIDGAGKSTHVGACVDWLRAQGETVVLSREPGGSPLAERLRE---LLLTEEM 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + EA++ AAR DH+ +IRPAL G+ ++CDRF DS++AYQG +L L+ Sbjct: 65 QPQTEALLAFAARSDHLHTLIRPALAAGQWVVCDRFTDSTFAYQGGGSDVDTTWLAQLEA 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + P T + DLP ++ D FE + + E+ R+ + Sbjct: 125 QVQDGLQPVRTYLFDLPPEV------AAARRAAVRSADRFEARALDYFERVRRAYQARVA 178 Query: 183 NQPDRCHIVDSAHSFQSV----ATNILNIVWELVQKRVSPLSSKKD 224 P+R ++D+ + + + +++ + +R + D Sbjct: 179 ADPERFCMLDATATPEQIGRWLQDDLVKVHRRW-HERAASRPGAGD 223 >gi|28493662|ref|NP_787823.1| thymidylate kinase [Tropheryma whipplei str. Twist] gi|28572855|ref|NP_789635.1| nucleotide kinase [Tropheryma whipplei TW08/27] gi|46576523|sp|Q83FM3|KTHY_TROWT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|46576525|sp|Q83HB8|KTHY_TROW8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28410988|emb|CAD67373.1| putative nucleotide kinase [Tropheryma whipplei TW08/27] gi|28476704|gb|AAO44792.1| thymidylate kinase [Tropheryma whipplei str. Twist] Length = 199 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 15/208 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++FEGI+G+GKT ++ FL+ V +TREPG R +L+ Sbjct: 1 MFVTFEGIDGSGKTAQLTAAGEFLKASGKQVVLTREPG---TISCIRDYVLASD---MDI 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA++++A R +++ + PAL GK++L DR+LDS AYQ + + L E S Sbjct: 55 RTEALLYSADRAENIAKNVIPALNAGKVVLQDRYLDSFLAYQLADNKLVETDIMRLFEFS 114 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q + PD T++ DL +R++NR D ERK + H K R I+L ++ + Sbjct: 115 SQGLRPDLTLLFDLTPACAQERLENR---------DRIERKPIDFHSKVRNIYLKLSADN 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 DR ++D++ SF + ++ + + Sbjct: 166 TDRIRVIDASQSFSKIHQQVIYHIERKL 193 >gi|194364655|ref|YP_002027265.1| dTMP kinase [Stenotrophomonas maltophilia R551-3] gi|194347459|gb|ACF50582.1| dTMP kinase [Stenotrophomonas maltophilia R551-3] Length = 221 Score = 211 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 22/220 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 F+S EG EGAGKTT I+ ++ L+ ++V +TREPGGTP AE R ++L + Sbjct: 10 RFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAE 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEAE ++ AAR HV VI+PAL G +L DRF DSSYAYQG ++ L Sbjct: 70 PLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDLQWIADL 129 Query: 121 QEISV------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +V ++ D+ V +G R R D E + ++ R Sbjct: 130 ERRAVGLLPGLTLLL-------DVEVAVGRARANGRDL-----WPDRIESEQDDFFQRVR 177 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++F A+ P R ++D+ + VA +++ V +Q Sbjct: 178 EVFRSRAQQDPQRFALIDAGQVQERVAADVVACVERWLQD 217 >gi|258540440|ref|YP_003174939.1| thymidylate kinase [Lactobacillus rhamnosus Lc 705] gi|257152116|emb|CAR91088.1| Thymidylate kinase [Lactobacillus rhamnosus Lc 705] Length = 181 Score = 211 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 3/183 (1%) Query: 36 HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 H+TREPGG +E R V+L A EA+++AA+R H+ VI+PAL G I++C Sbjct: 2 HLTREPGGAKISEMIRDVILDPKNTAMDARTEALLYAASRRQHLVEVIQPALAHGDIVVC 61 Query: 96 DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 DRF+DSS AYQG + + + + + PD T+ LD+PV +GL R+ R+ Sbjct: 62 DRFVDSSVAYQGGGRQIGTQAVLQMNQFATAGLEPDLTVYLDVPVQVGLDRIMAHQGERQ 121 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D +++ + HE+ ++ + + P R VD+ +V T + E + Sbjct: 122 Y---DRLDQESLAFHERVHAAYMKLVADNPKRIVTVDATQPLAAVVTAAFMTITERFPEL 178 Query: 216 VSP 218 + Sbjct: 179 FAK 181 >gi|15604527|ref|NP_221045.1| thymidylate kinase [Rickettsia prowazekii str. Madrid E] gi|6225595|sp|Q9ZCN9|KTHY_RICPR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|3861221|emb|CAA15121.1| THYMIDYLATE KINASE (tmk) [Rickettsia prowazekii] gi|292572315|gb|ADE30230.1| Thymidylate kinase [Rickettsia prowazekii Rp22] Length = 203 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 13/212 (6%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN G FI+FEG++G GK+T +L +L+ + V +TRE GGT AE R +L++ Sbjct: 1 MNKLTQGKFITFEGVDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTTVAEKMREILVN- 59 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +E +E + AAR DH+ I PAL +G I++CDRF+DS+ YQG + + Sbjct: 60 --EELLPMSELLQAMAARYDHMARKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLV 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + + +MPD T +D+ +KRV R + F+ + + ++K F Sbjct: 118 YSLHKTLMPSLMPDITFFIDVEPHTAIKRVNARNMS------NKFDIRSIDFYKKIYTCF 171 Query: 178 LDIARNQPDRCHIVDSAH-SFQSVATNILNIV 208 +++ P+R + ++H S V I + Sbjct: 172 KELSNRFPERIKTIKASHLSPLEVHELIQKHL 203 >gi|190571302|ref|YP_001975660.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018699|ref|ZP_03334507.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|238057702|sp|B3CM94|KTHY_WOLPP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|190357574|emb|CAQ55013.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995650|gb|EEB56290.1| thymidylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 205 Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 123/219 (56%), Gaps = 18/219 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL + ++ + + V +TREPGGT AE R LL D Sbjct: 1 MFITFEGIDGSGKTTQSELLANYFKQIHGENNVVLTREPGGTDFAEKIRGSLLK---DNI 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++F + R +H++ +I PAL EGK ++CDRF+DS+ AYQG + L + Sbjct: 58 DPISELLLFTSMRYEHMKELILPALKEGKTVICDRFIDSTIAYQGYGLGVDLSLIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T ILD+ V +GL R +++ + +E + + K R+ F +IA Sbjct: 118 LV-EIKYPDITFILDIDVQVGLSRAKDK---------NKYEEMSIDFYHKIRKGFQEIAI 167 Query: 183 NQPDRCHIVD--SAHSFQSVATNILNIVWELVQKRVSPL 219 + +RC+++ + V + I++++ + +K + PL Sbjct: 168 KESNRCNVITGIADKDNNKVYSEIIDVIRKK-KKGMQPL 205 >gi|89095549|ref|ZP_01168452.1| thymidylate kinase [Oceanospirillum sp. MED92] gi|89080187|gb|EAR59456.1| thymidylate kinase [Oceanospirillum sp. MED92] Length = 214 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 76/227 (33%), Positives = 112/227 (49%), Gaps = 33/227 (14%) Query: 1 MN---SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN SG FI+ EG EG GK+T+I L L + +V +TREPGGTP AE R +LL+ Sbjct: 1 MNQRLSGRFITVEGTEGVGKSTNIEYLCSLLDAQGIEVVLTREPGGTPLAEELRELLLAP 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + E ++ AAR H+ENVI+PAL G ++ DRF D+++AYQG + Sbjct: 61 REETVSEDTELLLMFAARAQHLENVIKPALGRGAWVVSDRFTDATFAYQGGGRGV---NV 117 Query: 118 D---SLQEISVQEVMP---------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 D +L+ I + P V+ GLKR R + D FER+ Sbjct: 118 DHIQALETIVQHGLQPDLTLLLDLD---------VETGLKRASKR------SEPDRFERE 162 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + EK R +L A +P+R ++D+ S V + I + + Sbjct: 163 KLDFFEKVRSTYLQRASAEPERFAVIDAGRSIPDVQSQISEALIHFL 209 >gi|15835078|ref|NP_296837.1| thymidylate kinase [Chlamydia muridarum Nigg] gi|270285245|ref|ZP_06194639.1| thymidylate kinase [Chlamydia muridarum Nigg] gi|270289264|ref|ZP_06195566.1| thymidylate kinase [Chlamydia muridarum Weiss] gi|301336641|ref|ZP_07224843.1| thymidylate kinase [Chlamydia muridarum MopnTet14] gi|13629246|sp|Q9PKK5|KTHY_CHLMU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|7190503|gb|AAF39311.1| thymidylate kinase [Chlamydia muridarum Nigg] Length = 203 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 105/210 (50%), Gaps = 9/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EGAGKT L + L + +V +TREPGG+ E R ++L E + Sbjct: 1 MFIVVEGGEGAGKTQFTQALSKRLMEEGKEVVLTREPGGSALGEQLRDLVLDV-TQEISS 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F AAR H++ I PAL GK ++CDRF DS+ YQG F+ L Sbjct: 60 YAELLLFLAARAQHIQEKILPALESGKTVICDRFHDSTIVYQGIAGGLGEAFVTDLCYRV 119 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + +PD T +LDLP GL R + + LD FE+K H R+ F+ +A Sbjct: 120 VGDEPFLPDITFLLDLPEKEGLLRKTRQKN------LDRFEQKPTSFHRAAREGFISLAE 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 PDR I+D+ + L + L+ Sbjct: 174 RSPDRYKILDALLPTEVSVDQALLQIRALI 203 >gi|58698493|ref|ZP_00373398.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae] gi|225630910|ref|YP_002727701.1| thymidylate kinase [Wolbachia sp. wRi] gi|58534987|gb|EAL59081.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila ananassae] gi|225592891|gb|ACN95910.1| thymidylate kinase [Wolbachia sp. wRi] Length = 212 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ + + V +TREPGGT AE R VLL + Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLL---TNNI 73 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG S + L + Sbjct: 74 DPISELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 LV-EIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208 +P RC ++ + V I++ + Sbjct: 184 KEPVRCSVITGIETKNDNHVHNEIIDKI 211 >gi|269959145|ref|YP_003328934.1| thymidylate kinase [Anaplasma centrale str. Israel] gi|269848976|gb|ACZ49620.1| thymidylate kinase [Anaplasma centrale str. Israel] Length = 211 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 17/218 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEG++G GKTT +LL ++L + V +TREPGGT E R VLL + Sbjct: 1 MFITFEGVDGCGKTTQAALLAKYLSDLYGEHRVVLTREPGGTSFNELVREVLLGLTDYKM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GK+++ DRF DS+ AYQG ++ L Sbjct: 61 DRITELMLFMAMRRESFVKVVSPGLLAGKVVISDRFTDSTVAYQGYGCGVDLSLVNMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +V+PD T ++D+ ++ L R L+ E + ++K R+ F I Sbjct: 121 LVA-DVVPDITFVMDISTELALTRT----------TLNGCESRSPEFYDKVREGFRAIVA 169 Query: 183 NQPDRCHIVD-SAHSFQS---VATNILNIVWELVQKRV 216 + P RCH+V+ + S + V I+ + E+ + ++ Sbjct: 170 SNPHRCHMVNCAEDSVEDVYSVHDRIVALFHEVTKDKL 207 >gi|168334030|ref|ZP_02692249.1| thymidylate kinase [Epulopiscium sp. 'N.t. morphotype B'] Length = 200 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 112/209 (53%), Gaps = 12/209 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN GLFI+ EG EG+GKTT SLLK + N V TREPGG +AE+ R + Sbjct: 1 MNRGLFIAIEGGEGSGKTTLCSLLKTHFEADNIPVIATREPGGIESAESIRDNIFQ---F 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ + +++ AAR +H+ + I PAL GK++L DRF S+ AYQG + + Sbjct: 58 DLDAKTDLLLYLAARREHLIHTILPALNAGKLVLSDRFYLSTLAYQGYASNLDIDIIQKF 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++PD II+DLP +IGL R + ++ F+ K + H K + +L + Sbjct: 118 NNFVCDDILPDLNIIIDLPPNIGLSR--------KGVDINRFDLKGLDFHTKVYEGYLQL 169 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +++D S S+ I +++ Sbjct: 170 SASIKN-VYLIDGTSSLTSLEHQIYSLIK 197 >gi|51473864|ref|YP_067621.1| thymidylate kinase [Rickettsia typhi str. Wilmington] gi|59798217|sp|Q68W53|KTHY_RICTY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|51460176|gb|AAU04139.1| TMPK [Rickettsia typhi str. Wilmington] Length = 203 Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 111/212 (52%), Gaps = 13/212 (6%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN G FI+FEG++G GK+T +L +L+ + V +TRE GGT AE R +L+ Sbjct: 1 MNKLTQGKFITFEGMDGIGKSTQSKMLYEYLKSQKIPVILTREVGGTFVAEKMREILVH- 59 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +E +E + AAR DH+ I PAL +G I++CDRF+DS+ YQG + + Sbjct: 60 --EELLPMSELLQAMAARYDHMVRKIIPALKDGYIVICDRFIDSTACYQGLELENGIDLV 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL + +MPD T +D+ D +KRV +R + F+R+ + ++K F Sbjct: 118 YSLHTTLMPSLMPDITFFIDVEPDTAIKRVNSRNMS------NKFDRRRIDFYKKIYSCF 171 Query: 178 LDIARNQPDRCHIVDSAH-SFQSVATNILNIV 208 +++ P+R + ++H + V I + Sbjct: 172 QELSHRFPERIKTIKASHLNPLEVHELIQKHL 203 >gi|269215702|ref|ZP_06159556.1| dTMP kinase [Slackia exigua ATCC 700122] gi|269131189|gb|EEZ62264.1| dTMP kinase [Slackia exigua ATCC 700122] Length = 247 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 75/211 (35%), Positives = 109/211 (51%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +SG+FI+FEG EGAGK+THI++L L+R ++V REPGGT EA R V+L +E Sbjct: 10 SSGVFITFEGGEGAGKSTHIAILAHVLERLGHEVLRLREPGGTSVGEALRAVVLDPDREE 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E VF A+R V VI PAL G ++LCDRF+DS+ AYQ + L Sbjct: 70 MCGLSELFVFEASRAQLVSQVIAPALERGAVVLCDRFIDSTTAYQAYGRGIDLDAVRFLN 129 Query: 122 EISVQEVMPDCTIILD-LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ Q +P T+++ GL R + D E+ H + Q F + Sbjct: 130 LLACQGTLPARTLLMQAADAHAGLARAT-------TLGADRMEQASDRFHARVAQGFDAL 182 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A +P+R V SA S + A ++ V +L Sbjct: 183 AACEPERFRAVSSAGSVEDTAVQVVASVSDL 213 >gi|254524318|ref|ZP_05136373.1| thymidylate kinase [Stenotrophomonas sp. SKA14] gi|219721909|gb|EED40434.1| thymidylate kinase [Stenotrophomonas sp. SKA14] Length = 221 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 22/220 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 F+S EG EGAGKTT I+ ++ L+ ++V +TREPGGTP AE R ++L + Sbjct: 10 RFVSLEGGEGAGKTTAINAIRDCLRSHGHEVVLTREPGGTPLAERIRGLVLKPDAEIAAE 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEAE ++ AAR HV VI+PAL G +L DRF DSSYAYQG ++ L Sbjct: 70 PLSAEAELLLVFAARAQHVRQVIQPALQRGAYVLSDRFTDSSYAYQGGGRGLDPQWIADL 129 Query: 121 QEISV------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +V ++ D+ V +G R R D E + ++ R Sbjct: 130 ERRAVGLLPGLTLLL-------DVDVAVGRARANGRDL-----WPDRIESEQDDFFQRVR 177 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +F A+ P R ++D+ + VA +++ V +Q Sbjct: 178 AVFRSRAQLDPQRFALIDAGQVQERVAADVVARVERWLQD 217 >gi|157826103|ref|YP_001493823.1| thymidylate kinase [Rickettsia akari str. Hartford] gi|166223109|sp|A8GPJ0|KTHY_RICAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157800061|gb|ABV75315.1| thymidylate kinase [Rickettsia akari str. Hartford] Length = 203 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG +G GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGDGIGKSTQAQMLYEYLKSQNTHVILTREVGGTAVAEKMRAILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E + AAR DH+ I PAL +G +++CDRF+DS+ YQG + + +L Sbjct: 61 SLLPMSELLQAMAARYDHMARKIIPALQDGHVVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I + +MP+ T +D+ D ++RV +R + F+ + + ++K F + Sbjct: 121 HKILMPSLMPEITFFIDVEPDTAIERVNSRNMS------NKFDIRGIDFYKKVYDCFKAL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPPEVHELIKKHL 203 >gi|255021134|ref|ZP_05293186.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756] gi|254969394|gb|EET26904.1| Thymidylate kinase [Acidithiobacillus caldus ATCC 51756] Length = 217 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 110/211 (52%), Gaps = 8/211 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G F++ EGIEGAGK+T + ++R+ + + V +TREPGG P EA R + L G++ Sbjct: 9 RTGFFVTLEGIEGAGKSTALPFVQRYCMDRGWSVEITREPGGGPLGEALRAIFLDPGLEL 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +++ A R +H+ I PAL G ++LCDRF DS++AYQG + + SL Sbjct: 69 SVEEELLLLY-AGRHEHLRRKILPALQRGALVLCDRFEDSTFAYQGGGRAFPIERIQSLS 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T+ D+ IG +R++ R D ER+ + E+ R+++ Sbjct: 128 RWTRLPRSPDLTLWFDVDPAIGAERIRARN-------PDRLERESLEFFERARRVYAARM 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R + + + V + +++ E + Sbjct: 181 AAEPRRYRRICANGTLAEVEQQLASVLAECL 211 >gi|261856504|ref|YP_003263787.1| thymidylate kinase [Halothiobacillus neapolitanus c2] gi|261836973|gb|ACX96740.1| thymidylate kinase [Halothiobacillus neapolitanus c2] Length = 217 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 74/219 (33%), Positives = 110/219 (50%), Gaps = 25/219 (11%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN+ G+FI+ EGIEGAGK+T I+ + + + +V TREPGGTP AEA R VLL+ Sbjct: 1 MNAPGIFITIEGIEGAGKSTAIAGVAEWFRAHGREVDCTREPGGTPIAEAIREVLLNPAE 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ E ++ AAR HV I+P L GK+++ DRF DSS AYQG +++ Sbjct: 61 EDLVPPTELMLMFAARAQHVAGRIKPGLAAGKVVISDRFTDSSRAYQGAGRGMDRSLIET 120 Query: 120 LQEISVQEVMPDCTIILDLP----------VDIGLKRVQNRYSLRESACLDYFERKDVMI 169 L + + Q + VD+G+K + R + D FER+ Sbjct: 121 LAQTAEQG----------VSPDLTLLLDLPVDVGMK---RAAARRGAGAHDRFERERHDF 167 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 E+ R FL++A Q R ++D+A V I + Sbjct: 168 FERVRAGFLELA-GQSTRFALIDAAAPIADVHMQIQTEL 205 >gi|124024337|ref|YP_001018644.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9303] gi|166223100|sp|A2CD19|KTHY_PROM3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123964623|gb|ABM79379.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9303] Length = 216 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 68/223 (30%), Positives = 105/223 (47%), Gaps = 19/223 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 SG + EGI+G GKTT + L +L R + +H+TREPGGT A R ++L Sbjct: 2 SGRLLVLEGIDGCGKTTQLRHLANWLPRSGLMPEGARLHLTREPGGTALGMALRKLVLHP 61 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G AE +++AA R HV +IRPAL +G +L DRF S+ AYQG Sbjct: 62 PGDASPEPLAELLLYAADRAQHVAQLIRPALEQGHWVLSDRFSGSTLAYQGYGRELDLDL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L++I+ ++PD T L+L V+ L R R + D E + V + Sbjct: 122 IQQLEQIATAGLVPDLTFWLELSVEESLVRRDARSN-------DRIEAEGVDFLTRVATG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 F +AR + + + +SV+ + + ++ PL Sbjct: 175 FAVLARERS--WVPLQADQQVESVS----SALESQLKHHFGPL 211 >gi|330814087|ref|YP_004358326.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063] gi|327487182|gb|AEA81587.1| thymidylate kinase [Candidatus Pelagibacter sp. IMCC9063] Length = 211 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 117/213 (54%), Gaps = 7/213 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 +N G+FI+FEGIEG+GK+T I LL +FL+ + +++TREPGGT +E R +++ Sbjct: 3 LNRGIFITFEGIEGSGKSTQIKLLYKFLKANVSKKIYLTREPGGTKISEKIRKLVIKDLN 62 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E E + AAR +H ++I+ L G I+LCDR+LDS+ AYQ S + Sbjct: 63 EENNPLTELFLLFAARAEHY-DLIKEKLRSGYIVLCDRYLDSTIAYQHFNGSIDLKLIHY 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 LQ++ + + P+ TI+LD + KR+ R + LD F+R+ + ++ FL Sbjct: 122 LQKLIDKNIRPNLTILLDANPSVSKKRMHLR-----AKKLDRFDRESLKKMNIIKKGFLA 176 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 IA+ + R +++ + I + V + + Sbjct: 177 IAKVEKKRIFVINGNADLDLIHDKIKSKVLKSL 209 >gi|33519860|ref|NP_878692.1| thymidylate kinase [Candidatus Blochmannia floridanus] gi|46576471|sp|Q7VR23|KTHY_BLOFL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33504205|emb|CAD83467.1| thymidylate kinase [Candidatus Blochmannia floridanus] Length = 211 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 10/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-G 58 MN+ FI EG++G+GKTT + + ++ + +V T EPGGT A ++ + Sbjct: 1 MNN-RFIVVEGLDGSGKTTIVHKIVKYFYNQKITNVITTHEPGGTEIAYILSELIKNKSK 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +E ++ AAR +ENVI+PAL +G ++ DR SS+AYQG + L+ Sbjct: 60 NEKLTDLSELLMLYAARSQLLENVIKPALFKGDWVIGDRCDLSSFAYQGAGRKLNSVLLN 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + + + P LD+P ++ L R++NR LD E++ + + R + Sbjct: 120 MLSQYVINDFFPKLIFYLDIPSELVLSRIKNRK------VLDRIEQESLSFFNRVRSYYR 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A + ++D++ + V I + + + Sbjct: 174 KLAFL-KENIIMIDASQPLEQVCVFIYRYLDQWL 206 >gi|33866768|ref|NP_898327.1| thymidylate kinase [Synechococcus sp. WH 8102] gi|46576438|sp|Q7U437|KTHY_SYNPX RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33639369|emb|CAE08753.1| Thymidylate kinase [Synechococcus sp. WH 8102] Length = 209 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 15/216 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 SG FI +GI+G GK+T + L +L ++ TREPGGTP + R +LL Sbjct: 2 SGRFIVLDGIDGCGKSTQLDHLLGWLPGSGLMPAGAELISTREPGGTPLGRSVRELLLHT 61 Query: 58 GVDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ AE +++AA R HVE +I P L G ++ DRF S+ AYQG Sbjct: 62 RAEQAPAPTAELLLYAADRAQHVERLILPTLERGDWVISDRFSGSTMAYQGYGRGLDRQL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +D L+ I+ V PD T+ L LP++ L+R R+ D E + + ++ Sbjct: 122 IDQLERIATAGVQPDLTLWLTLPLEESLRR-------RQGDQADRIEAEGQVFLQRVIDG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F IA + + + ++V+ + + + + Sbjct: 175 FAAIAEQRQ--WSAIAADRPPEAVSRALERELMDRL 208 >gi|219871835|ref|YP_002476210.1| thymidylate kinase [Haemophilus parasuis SH0165] gi|254808297|sp|B8F7G0|KTHY_HAEPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|219692039|gb|ACL33262.1| thymidylate kinase [Haemophilus parasuis SH0165] Length = 208 Score = 210 bits (536), Expect = 9e-53, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 106/211 (50%), Gaps = 9/211 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DE 61 G FI EG+EGAGK+ ++ L + TREPGGTP AEA R++ + Sbjct: 2 RGKFIVIEGLEGAGKSNAQRIVSETLAAHGIEFITTREPGGTPIAEALRNLWKEGEDGEH 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++ AAR+ VE VI PAL GK ++ DR SS AYQG +D + Sbjct: 62 TTDKAEVLMIYAARIQLVETVIEPALASGKWVVGDRHNMSSQAYQGGGRGL-AELVDEVG 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD TI LD+ IGL+R + R LD E+ D+ + R+ ++ + Sbjct: 121 SAILGDFEPDFTIYLDIEPSIGLERARGR------GALDRIEQLDIDFFHRTRERYVSLV 174 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ P + ++++ + + V+ +I V + Sbjct: 175 KDNP-KAVLINAEPAIEQVSADIQQAVEIFL 204 >gi|299136794|ref|ZP_07029977.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8] gi|298601309|gb|EFI57464.1| thymidylate kinase [Acidobacterium sp. MP5ACTX8] Length = 221 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 9/222 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G FI+FEG++G+GKTT + L L+ + V R+PGGT + R VLL + Sbjct: 1 MSRGFFITFEGLDGSGKTTQLRRLAAALEAEGLRVVTLRQPGGTALGDRIRSVLLDSRTE 60 Query: 61 E----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 AE + A R + +VI PAL EG ++LCDR+ DSS AYQG Sbjct: 61 SELGGIAPTAEMALMFADRAQSLAHVIHPALAEGAVVLCDRYTDSSEAYQGAGRGLGSER 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIG----LKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ P+ TI+L LP G +R R + FER+ + + Sbjct: 121 IRAMHTAVCDGFQPELTILL-LPPLEGSLARARRRNERNVRTRGTDENRFEREGDEFYRR 179 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +++IAR +R + S +++A I IV E + + Sbjct: 180 IYDQYVEIARRDSERVVTIAEEASIETIAERIRAIVRERMAQ 221 >gi|257064315|ref|YP_003143987.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476] gi|256791968|gb|ACV22638.1| thymidylate kinase [Slackia heliotrinireducens DSM 20476] Length = 234 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 11/215 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G+FI+FEG EGAGK+THI+ L + L+ ++V REPG T E R V+L E Sbjct: 7 HTGVFITFEGGEGAGKSTHINFLAQTLEACGFEVVRVREPGSTRIGEQLRGVVLDPENAE 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++ AAR V I+PAL G I+LCDRF DS+ AYQG + + Sbjct: 67 MADWTELFIYEAARAQLVAEAIKPALERGAIVLCDRFTDSTLAYQGYGRGLELDRVRRAN 126 Query: 122 EISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++ Q ++PD T+++ P GL R D E H + Q F+++ Sbjct: 127 ELACQGIVPDATVLMVAPNALEGLYRATK------DDGADRLESAGHDFHVRVNQAFVEL 180 Query: 181 ARNQPDRCHIVDS----AHSFQSVATNILNIVWEL 211 A R +V S + + QSV + +++ +L Sbjct: 181 AAQSKKRIRMVQSASAKSLTSQSVFKALADVLPQL 215 >gi|157828901|ref|YP_001495143.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933625|ref|YP_001650414.1| thymidylate kinase [Rickettsia rickettsii str. Iowa] gi|166223112|sp|A8GTB0|KTHY_RICRS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030838|sp|B0BUU8|KTHY_RICRO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157801382|gb|ABV76635.1| thymidylate kinase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908712|gb|ABY73008.1| thymidylate kinase [Rickettsia rickettsii str. Iowa] Length = 203 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELFQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|307544593|ref|YP_003897072.1| thymidylate kinase [Halomonas elongata DSM 2581] gi|307216617|emb|CBV41887.1| thymidylate kinase [Halomonas elongata DSM 2581] Length = 217 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 112/222 (50%), Gaps = 20/222 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG EG GK+T+++L+ L+ + +V TREPGGTP AEA R +LL DE Sbjct: 3 RRGRFITLEGGEGVGKSTNLALVADHLEARGLEVVRTREPGGTPRAEAIRKLLLDPAADE 62 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +AE ++ AAR H+ V+RPAL G ++CDRF D+++AYQG + L Sbjct: 63 PLDDDAELLLVFAARAQHLARVVRPALERGAWVVCDRFTDATFAYQGGGRGIDTARIAEL 122 Query: 121 QEISVQE---------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + + MP + +R++ R R+ D FER+ + Sbjct: 123 EAFVQRGLTPDLTLLLDMP---------MAAAQRRLEGRLD-RDGGQRDRFERERAEFFD 172 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R+ +L+ A P+R ++V++ +V + +++ ++ Sbjct: 173 AVRRAYLERADEAPERVYVVNADQPLDAVQDELKSLLDGCLE 214 >gi|157964834|ref|YP_001499658.1| thymidylate kinase [Rickettsia massiliae MTU5] gi|166987707|sp|A8F2H5|KTHY_RICM5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157844610|gb|ABV85111.1| Thymidylate kinase [Rickettsia massiliae MTU5] Length = 203 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAIAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMS------NKFDIRGIDFYKKIYDCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|42521048|ref|NP_966963.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410789|gb|AAS14897.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila melanogaster] Length = 212 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ + + V +TREPGGT AE R VLL+ +D Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 77 S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 LV-EIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208 +P RC ++ + V I++ + Sbjct: 184 KEPVRCSVITGIETKNDNHVHNEIIDKI 211 >gi|34581335|ref|ZP_00142815.1| thymidylate kinase [Rickettsia sibirica 246] gi|28262720|gb|EAA26224.1| thymidylate kinase [Rickettsia sibirica 246] Length = 203 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMVRKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDIEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|229587042|ref|YP_002845543.1| thymidylate kinase [Rickettsia africae ESF-5] gi|259494279|sp|C3PLG0|KTHY_RICAE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|228022092|gb|ACP53800.1| Thymidylate kinase [Rickettsia africae ESF-5] Length = 203 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPISELLQVMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|99034767|ref|ZP_01314692.1| hypothetical protein Wendoof_01000490 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 196 Score = 209 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ + + V +TREPGGT AE R VLL+ +D Sbjct: 1 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 61 S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 118 LV-EIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167 Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208 +P RC ++ + V I++ + Sbjct: 168 KEPVRCSVITGIETKNDNHVHNEIIDKI 195 >gi|67458626|ref|YP_246250.1| thymidylate kinase [Rickettsia felis URRWXCal2] gi|75536908|sp|Q4UMX3|KTHY_RICFE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|67004159|gb|AAY61085.1| Thymidylate kinase [Rickettsia felis URRWXCal2] Length = 206 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 65/209 (31%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTAVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL +G I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMVRKIIPALQDGHIVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D ++RV R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIERVNLRNMS------NKFDVRGIDFYKKIYDCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|293364068|ref|ZP_06610804.1| dTMP kinase [Mycoplasma alligatoris A21JP2] gi|292552558|gb|EFF41332.1| dTMP kinase [Mycoplasma alligatoris A21JP2] Length = 216 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 11/209 (5%) Query: 5 LFISFEGIEGAGKTTHISL-LKRFLQRK-NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT I L+ L++ N +TREPGG AE R ++L Sbjct: 1 MFITFEGLDGSGKTTIIEKFLENILEKFPNLKYVLTREPGGKDIVEAEKIREIILDKK-S 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + EA++++A+R H+E+VI PAL ++LCDR++DS YAYQG S +++ L Sbjct: 60 QLSSVTEALLYSASRRIHLESVIWPALENNHLVLCDRYVDSFYAYQGYARSLGVEYVEEL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + + MPD TI D+ KR L D + + H K +L I Sbjct: 120 TKLVIDKTMPDITIFFDINPADSKKR-----RLANRLVHDRMDDETEAFHNKVYGGYLKI 174 Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILNIV 208 + DR IVD++ S V + + Sbjct: 175 IEKEKSDRFIIVDASKSIDEVLEQVNQKL 203 >gi|239948423|ref|ZP_04700176.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922699|gb|EER22723.1| thymidylate kinase [Rickettsia endosymbiont of Ixodes scapularis] Length = 203 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 107/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLKSQNTPVILTREVGGTLVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTACYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMS------NKFDIRGIDFFIKIYDCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|32477522|ref|NP_870516.1| thymidylate kinase [Rhodopirellula baltica SH 1] gi|46576444|sp|Q7UIM1|KTHY_RHOBA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|32448076|emb|CAD77593.1| thymidylate kinase [Rhodopirellula baltica SH 1] Length = 245 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ +GI+G GK++ I +L L+ + +V R+PG T R +LL ++ Sbjct: 48 GRLITLDGIDGVGKSSQIEILAERLRSEGRNVLCVRDPGSTDLGTKLRAMLLDSDLE-MH 106 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++F A+R + +E+ +R AL +G ++ DRFL ++ YQ L L + Sbjct: 107 RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDAQTLWQLGRL 166 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V PD T++LDLP +I ++RV D E + V K RQ FLD N Sbjct: 167 ACGGVQPDVTLLLDLPAEISMQRV--------GGEADRMESRGVDYMAKVRQAFLDELPN 218 Query: 184 QPDRCHIVDSAHSFQSVATNILNI 207 R H++D++ + + VA I I Sbjct: 219 AGGRTHVIDASGTIEEVAETIAAI 242 >gi|240142285|ref|YP_002966795.1| thymidylate kinase [Methylobacterium extorquens AM1] gi|240012229|gb|ACS43454.1| thymidylate kinase [Methylobacterium extorquens AM1] Length = 225 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 71/188 (37%), Positives = 103/188 (54%), Gaps = 6/188 (3%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+F S EG EGAGK++ I+ L ++ +V VTREPGG AE R+++LS V ++ Sbjct: 11 GVFASLEGPEGAGKSSQINRLAERMRAAGREVVVTREPGGCKGAEVLRNLVLSGAV-QWD 69 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++FAAAR +HV I PAL G ++L DRF +SS AYQG D L+ I Sbjct: 70 PRTELMLFAAARREHVVRTIAPALARGAVVLSDRFSESSRAYQGAARGVGTALCDDLERI 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++PD +LD+ +GL R + R + FE D+ H RQ FLD A Sbjct: 130 ACDGILPDVVFLLDVDPVVGLARSKARATDSTM-----FEALDLEFHRTLRQAFLDRAAE 184 Query: 184 QPDRCHIV 191 +P+ ++ Sbjct: 185 RPELFEVI 192 >gi|121607993|ref|YP_995800.1| dTMP kinase [Verminephrobacter eiseniae EF01-2] gi|166223126|sp|A1WGM5|KTHY_VEREI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|121552633|gb|ABM56782.1| thymidylate kinase [Verminephrobacter eiseniae EF01-2] Length = 226 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 75/234 (32%), Positives = 116/234 (49%), Gaps = 19/234 (8%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ GLFISFEGI+GAGK++H+ L + + V V+REPGGTP AE R +LL Sbjct: 1 MSRPGLFISFEGIDGAGKSSHVEGLAAAFRAQGRRVTVSREPGGTPLAEKLRALLL---A 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A E+++ AAR DH+ VI PAL G ++LCDRF DS++AYQG H L Sbjct: 58 ERMDALTESLLIFAARRDHLRQVIEPALARGDVVLCDRFTDSTFAYQGAGRGFDHETLSI 117 Query: 120 LQEIS------VQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L+ ++ ++ P+ T+ DL ++ +R+ D FE + V Sbjct: 118 LERMTNTAAAHKDGLLPEPELTLWFDLAPELAAERMAGAAH-----RPDRFEAQPVEFFR 172 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKRVSPLSSKK 223 + + + D A P R +D+A V + + + + V+P + Sbjct: 173 RVARGYADRAAAAPRRIVRIDAAQECHRVRQQLRDALVCKGWLAPMVTPQGGAQ 226 >gi|59798343|sp|Q73FS2|KTHY_WOLPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 196 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ + + V +TREPGGT AE R VLL+ +D Sbjct: 1 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 61 S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLRLIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 118 LV-EIKYPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 167 Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208 +P RC ++ + V I++ + Sbjct: 168 KEPVRCSVITGIETKNDNHVHNEIIDKI 195 >gi|238651001|ref|YP_002916857.1| thymidylate kinase [Rickettsia peacockii str. Rustic] gi|259494280|sp|C4K2K8|KTHY_RICPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|238625099|gb|ACR47805.1| thymidylate kinase [Rickettsia peacockii str. Rustic] Length = 203 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 108/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF+DS+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIDSTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++ F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKTIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|288965848|pdb|3LD9|A Chain A, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution gi|288965849|pdb|3LD9|B Chain B, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution gi|288965850|pdb|3LD9|C Chain C, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution gi|288965851|pdb|3LD9|D Chain D, Crystal Structure Of Thymidylate Kinase From Ehrlichia Chaffeensis At 2.15a Resolution Length = 223 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 21/213 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL +L +V +TREPGGT E+ R++L Sbjct: 22 MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLF--KAQGL 79 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +E + F A R +H +I+P+LM+ KI++CDRF+DS+ AYQG +D L + Sbjct: 80 DSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLND 139 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + +V PD T I+D+ ++ L R +C + +E D+ + + R F DIA+ Sbjct: 140 LVI-DVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIAK 188 Query: 183 NQPDRCHIV-DSAHS-----FQSVATNILNIVW 209 P RCH++ D + + V ++ ++ Sbjct: 189 KNPHRCHVITDKSETYDIDDINFVHLEVIKVLQ 221 >gi|225677081|ref|ZP_03788085.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590877|gb|EEH12100.1| thymidylate kinase [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 212 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 74/208 (35%), Positives = 116/208 (55%), Gaps = 17/208 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ + + V +TREPGGT AE R VLL+ +D Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIRGENNVVLTREPGGTNFAEKVRGVLLTNNIDSI 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG + L + Sbjct: 77 S---ELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGFGVDLGLIGDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + E PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 LVEIEC-PDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIVDS--AHSFQSVATNILNIV 208 +P RC ++ + V I++ + Sbjct: 184 KEPVRCSVITGIETKNDNHVHNEIIDKI 211 >gi|157804070|ref|YP_001492619.1| thymidylate kinase [Rickettsia canadensis str. McKiel] gi|166223111|sp|A8EZQ1|KTHY_RICCK RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157785333|gb|ABV73834.1| thymidylate kinase [Rickettsia canadensis str. McKiel] Length = 203 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 108/212 (50%), Gaps = 13/212 (6%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN+ G FI+FEG EG+GK+T +L +L+ +N V +TRE GGT +E R +L+ Sbjct: 1 MNNLTQGKFITFEGGEGSGKSTQSQMLYEYLKSQNTPVILTREVGGTIVSEKMREILVH- 59 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +E +E + AAR DH+ I P L EG I++CDRFLDS+ YQG + + Sbjct: 60 --EELLPMSELLQAMAARYDHMVRKIIPVLKEGYIVICDRFLDSTACYQGLELENGIDLV 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +L + + +MPD T +D+ D +KRV R + F+ + + + K F Sbjct: 118 YNLHKTLMPPLMPDITFFIDVEPDTAIKRVNLRNMS------NKFDIRGIDFYNKIYDCF 171 Query: 178 LDIARNQPDRCHIVDSA-HSFQSVATNILNIV 208 +++ P R + ++ S V I + Sbjct: 172 KELSNRFPARIKTIKASDLSMLEVHELIKKHL 203 >gi|15892970|ref|NP_360684.1| thymidylate kinase [Rickettsia conorii str. Malish 7] gi|23821795|sp|Q92GS5|KTHY_RICCN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|15620166|gb|AAL03585.1| thymidylate kinase [Rickettsia conorii str. Malish 7] Length = 203 Score = 208 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 109/209 (52%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +LQ +N V +TRE GGT AE R +L+ + Sbjct: 4 LKQGKFITFEGGEGIGKSTQSQMLYEYLQSQNTPVILTREVGGTIVAEKMREILVH---E 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +E + AAR DH+ I PAL EG I++CDRF++S+ YQG + + +L Sbjct: 61 ELLPMSELLQAMAARYDHMARKIIPALQEGHIVICDRFIESTVCYQGLELENGIDLVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ D +KRV +R + F+ + + ++K F ++ Sbjct: 121 HKTLMPSLMPDITFFIDVEPDTAIKRVNSRNMN------NKFDIRGIDFYKKIYYCFKEL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + P+R + ++ S V I + Sbjct: 175 SNRFPERIKTIKASDLSPLEVHELIKKHL 203 >gi|157827624|ref|YP_001496688.1| thymidylate kinase [Rickettsia bellii OSU 85-389] gi|166223110|sp|A8GXQ1|KTHY_RICB8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157802928|gb|ABV79651.1| thymidylate kinase [Rickettsia bellii OSU 85-389] Length = 206 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ Sbjct: 4 LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVH---T 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +E + AAR DH+ I PAL G I++CDRF+DS+ YQG + + +L Sbjct: 61 DLLPMSELLQAMAARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ I ++R+ +R + F+ + + + K F + Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERINSRNMS------NKFDVRGLDFYNKIYDCFKGL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 ++ P+R + ++ + + V I + Sbjct: 175 SKKFPERIVTIKASDLNPEQVHELIKKHL 203 >gi|15618193|ref|NP_224478.1| thymidylate kinase [Chlamydophila pneumoniae CWL029] gi|15835808|ref|NP_300332.1| thymidylate kinase [Chlamydophila pneumoniae J138] gi|16752765|ref|NP_445033.1| thymidylate kinase [Chlamydophila pneumoniae AR39] gi|33241615|ref|NP_876556.1| thymidylate kinase [Chlamydophila pneumoniae TW-183] gi|8134529|sp|Q9Z8R5|KTHY_CHLPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|4376546|gb|AAD18422.1| Thymidylate Kinase [Chlamydophila pneumoniae CWL029] gi|7189404|gb|AAF38316.1| thymidylate kinase [Chlamydophila pneumoniae AR39] gi|8978647|dbj|BAA98483.1| thymidylate kinase [Chlamydophila pneumoniae J138] gi|33236124|gb|AAP98213.1| dTMP kinase [Chlamydophila pneumoniae TW-183] gi|269303148|gb|ACZ33248.1| thymidylate kinase [Chlamydophila pneumoniae LPCoLN] Length = 206 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG EG+GK++ L L ++ V +TREPGG E R ++L E Sbjct: 1 MFIVIEGGEGSGKSSLAKALGDQLVAQDRKVLLTREPGGCLIGERLRDLILEPPHLELSR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F +R H++ VI PAL +G I++C+RF DS+ YQG + F+ L Sbjct: 61 CCELFLFLGSRAQHIQEVIIPALRDGYIVICERFHDSTIVYQGIAEGLGADFVADLCSKV 120 Query: 125 VQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V +P+ ++LD+P DIGL+R D FE+K + H + R+ FL +A Sbjct: 121 VGPTPFLPNFVLLLDIPADIGLQRKH------RQKVFDKFEKKPLSYHNRIREGFLSLAS 174 Query: 183 NQPDRCHIVDSAHSFQSVATNIL 205 P R ++D+ S S+ ++ Sbjct: 175 ADPSRYLVLDARESLASLIDKVM 197 >gi|168705271|ref|ZP_02737548.1| thymidylate kinase [Gemmata obscuriglobus UQM 2246] Length = 216 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 11/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M F+S +G++G GK+T LL +L + V +PGGTP + R +LL Sbjct: 1 MPRPAFLSLDGLDGTGKSTQCRLLVEWLVAQGVPVTACTDPGGTPLGQELRKLLLFGREH 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G EA++F A+R VE VIRPAL G++++ DRFL ++ YQG L + Sbjct: 61 RIGTRTEALLFMASRAQLVEEVIRPALARGEVVVSDRFLLANVVYQGHAGGLSPEELWQV 120 Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + PD T++LDLP +I ++R + D E + E+ R F Sbjct: 121 GTFATGGAERLEPDLTLVLDLPPEIA--------AVRRNREADRMEARGADYAERVRAGF 172 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +R +VD+ + V I V L++ R Sbjct: 173 RSEVARRTERLRLVDATANVDGVQKIIRGEVAGLLRGR 210 >gi|225874540|ref|YP_002755999.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196] gi|225791865|gb|ACO31955.1| dTMP kinase [Acidobacterium capsulatum ATCC 51196] Length = 219 Score = 207 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 27/230 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G F++FEG++G+GK+T + L ++L+ + V VTR+PGGT + R +LL + Sbjct: 1 MRQGFFLTFEGLDGSGKSTQLRRLAQWLEARGESVVVTRQPGGTRIGDGIRALLLDSRTE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE + R + VIRPAL GKI+LCDR+ DS+ AYQG + +L Sbjct: 61 SISPMAELGFMFSDRAQSIAEVIRPALDAGKIVLCDRYTDSTEAYQGGGRQLGSELVRNL 120 Query: 121 QEISVQE------------VMPDCTIILDLPVDIGLKRVQNRYSL---RESACLDYFERK 165 ++ L+R + R RE FE++ Sbjct: 121 HQVMCGGLDPDLTLLLLPDF------------ARSLERARRRNGRVAAREGKDEGRFEQE 168 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + + + +IAR +P R ++S +S+ +I++IV E + +R Sbjct: 169 NEIFYRRVFDQYGEIARREPLRVVAIESDEGIESIHQHIVHIVEERLARR 218 >gi|327543342|gb|EGF29771.1| thymidylate kinase [Rhodopirellula baltica WH47] Length = 225 Score = 207 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 64/204 (31%), Positives = 102/204 (50%), Gaps = 9/204 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ +GI+G GK++ I +L L+ + V R+PG T R +LL ++ Sbjct: 24 GRLITLDGIDGVGKSSQIEILAERLRSEGRQVLCVRDPGSTDLGTKLRAMLLDSDLE-MH 82 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA++F A+R + +E+ +R AL +G ++ DRFL ++ YQ L L + Sbjct: 83 RRTEAMLFMASRCEMIESTLRSALADGVTVISDRFLLANVVYQSVGGEVDAQTLWQLGRL 142 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V PD T++LDLP +I ++RV D E + V K RQ FLD N Sbjct: 143 ACGGVQPDVTLLLDLPAEISMQRV--------GGEADRMESRGVDYMAKVRQAFLDELPN 194 Query: 184 QPDRCHIVDSAHSFQSVATNILNI 207 R H++D++ + + VA I I Sbjct: 195 AGGRTHVIDASGTIEEVAETIAAI 218 >gi|198283696|ref|YP_002220017.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667539|ref|YP_002426325.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248217|gb|ACH83810.1| dTMP kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519752|gb|ACK80338.1| thymidylate kinase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 214 Score = 207 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 8/203 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG F++ EGIEGAGK++ + +L ++ Y V VTREPGG P EA R + L + Sbjct: 7 KSGFFLTLEGIEGAGKSSALPVLAELCHQQGYAVEVTREPGGGPLGEALRTIFLDDSLHL 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +++ A R +H I PAL GK+++ DR+ DS+YAYQ + +L Sbjct: 67 DADEELLLLY-AGRRNHWRTRIAPALAAGKVVISDRYEDSTYAYQSGGRGVPPAHIAALA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T D+ ++G R++ R D E++D + R +F + Sbjct: 126 RWAGITRRPDLTFWFDIAPELGAARIRMR-------RPDRLEQEDQAFFRRARAVFAERC 178 Query: 182 RNQPDRCHIVDSAHSFQSVATNI 204 +P R VD++ V + Sbjct: 179 AAEPQRIWRVDASLPLAMVHDAV 201 >gi|33860690|ref|NP_892251.1| thymidylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|46576452|sp|Q7V3E6|KTHY_PROMP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|33633632|emb|CAE18589.1| Thymidylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 214 Score = 207 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 15/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 G FI EGI+G GKTT I + ++ L R + TREPGG+ + R+++L Sbjct: 2 RGKFIVIEGIDGCGKTTQIDEISKWIPTSGLLRGKQKLVKTREPGGSLLGKKIRNLILDN 61 Query: 58 G-VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ + AE ++++A R +H+ I PAL +L DRF DS+ AYQG + Sbjct: 62 HKDNKPSSLAELLLYSADRAEHISKTISPALENQDWVLSDRFCDSTLAYQGYGRNINLEI 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + +++ I Q PD TI L++ + + R RE D E + + EK + Sbjct: 122 IKNIESIVCQGESPDLTIFLEISAEESVLR-------REKFIPDRMESEGIKFLEKVNEG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F IA+ + + ++ I + + Sbjct: 175 FKLIAKE--KNWTTISALQDINTITNEIKETLLK 206 >gi|294155947|ref|YP_003560331.1| dTMP kinase [Mycoplasma crocodyli MP145] gi|291600094|gb|ADE19590.1| dTMP kinase [Mycoplasma crocodyli MP145] Length = 220 Score = 207 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 11/211 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT I + L +K +TREPGG AE R ++L Sbjct: 1 MFITFEGLDGSGKTTVIEKVTELLHKKFPELKYILTREPGGKDIVEAERIREIILDKS-S 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA++++A+R H+E+VI P+L E K++LCDRF+DS YAYQG F SL Sbjct: 60 KISPVTEALLYSASRRIHLEHVIWPSLKEKKLVLCDRFIDSFYAYQGYARELGIDFATSL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E+ + +PD TI D+ KR L D + + + H K +L I Sbjct: 120 TELIIDNTIPDLTIFFDINPADSKKR-----RLANRLVHDRMDDETEIFHNKVYDGYLKI 174 Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILNIVWE 210 +R IVD++ SF V ++ + E Sbjct: 175 IDKDKNNRFIIVDASKSFDEVVEQVIQKLME 205 >gi|91205052|ref|YP_537407.1| thymidylate kinase [Rickettsia bellii RML369-C] gi|122425994|sp|Q1RJZ6|KTHY_RICBR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|91068596|gb|ABE04318.1| Thymidylate kinase [Rickettsia bellii RML369-C] Length = 206 Score = 207 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 10/209 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI+FEG EG GK+T +L +L+ +N V +TRE GGT AE R +L+ Sbjct: 4 LKQGTFITFEGGEGIGKSTQCQMLYEYLKSQNIPVILTREVGGTNVAEKMREILVH---T 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +E + AAR DH+ I PAL G I++CDRF+DS+ YQG + + +L Sbjct: 61 DLLPMSELLQAMAARYDHMVKKIIPALQAGNIVICDRFIDSTACYQGLELENGIELVYNL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + +MPD T +D+ I ++RV +R + F+ + + + K F + Sbjct: 121 HKDLMPPLMPDLTFFIDVESSIAIERVNSRNMS------NKFDVRGLDFYNKIYDCFKGL 174 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIV 208 ++ P+R + ++ + + V I + Sbjct: 175 SKKFPERIVTIKASDLNPEQVHELIKKHL 203 >gi|21227213|ref|NP_633135.1| thymidylate kinase [Methanosarcina mazei Go1] gi|23821771|sp|Q8PXV5|KTHY_METMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|20905554|gb|AAM30807.1| Thymidylate kinase [Methanosarcina mazei Go1] Length = 206 Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 13/214 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T ++ + + +D TREP A + D+ Sbjct: 2 RGKLITLEGIDGSGKSTVAKKIQENPEIQVFDPVFTREPTRGTLTGTAVENAIQSETDQL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQ 121 AE +F A +H+ +++PAL GK ++ DR+ DS YAYQG S+ L+ ++ Sbjct: 62 ---AELFLFTADHAEHLAKLVKPALANGKNVISDRYSDSRYAYQGVTLKSRFENPLEWVR 118 Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V+PD T + D+ +I ++R R FE+ + + R+ FL + Sbjct: 119 SLHSGWTVVPDLTFLFDIEPEIAVERCGKRGEQT------KFEK--IEFLQNVRENFLIL 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A P R ++D++ + V ++ V E +Q+ Sbjct: 171 AAEDPGRFVVIDASRPQEEVEKKVIKKVLEFIQR 204 >gi|240047504|ref|YP_002960892.1| Thymidylate kinase [Mycoplasma conjunctivae HRC/581] gi|239985076|emb|CAT05069.1| Thymidylate kinase [Mycoplasma conjunctivae] Length = 209 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 110/212 (51%), Gaps = 9/212 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEGI+G GKTT ++L ++LQ+K ++ VTREPGGT AE R + L D Sbjct: 1 MFITFEGIDGCGKTTVLNLFAKYLQKKFPTREIIVTREPGGTGVVEAEKVREIALDRNHD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E ++ A +R H+E +I PAL E KI+LCDR++DSS AYQG + + Sbjct: 61 -ISPYSEMLLMATSRRMHLEKLIWPALKENKIILCDRYIDSSIAYQGFGLQLGEQLVSMV 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T +D+ + +R+ + + D E + + + + F + Sbjct: 120 NNLISNNTKPDITFFIDVEPKVAFERMSQIINHKR----DRLEIRGRQFYLRVIEGFNFV 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A+ +P+ + + + V N++N+ + + Sbjct: 176 AKQRPNNFFKISGNNQPEEVLANVINVFEKFL 207 >gi|159184784|ref|NP_354504.2| thymydilate kinase [Agrobacterium tumefaciens str. C58] gi|159140072|gb|AAK87289.2| thymydilate kinase [Agrobacterium tumefaciens str. C58] Length = 188 Score = 207 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 2/179 (1%) Query: 36 HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 VTREPGG+P AEA RHV+LS + FG EAI+FAAAR DHVE VIRPAL G+I+LC Sbjct: 2 VVTREPGGSPGAEAVRHVILSGAAESFGVRMEAILFAAARNDHVEEVIRPALARGEIVLC 61 Query: 96 DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 DRFLDSS YQG + + F+++LQ I++ V+P+ T+I D+ + GL R + R E Sbjct: 62 DRFLDSSRVYQGTTGNLEPDFIETLQRIAIDGVVPELTLIFDIAAEKGLARARKR--ADE 119 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A D FE++++ HEKRR+ +LDIA +P RC IV++ V ++++ V L+++ Sbjct: 120 GATPDRFEKEEIETHEKRREAYLDIALAEPRRCRIVNADQPEDKVTEDVMSFVEPLLER 178 >gi|159902685|ref|YP_001550029.1| thymidylate kinase [Prochlorococcus marinus str. MIT 9211] gi|238687123|sp|A9BCY7|KTHY_PROM4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|159887861|gb|ABX08075.1| Thymidylate kinase [Prochlorococcus marinus str. MIT 9211] Length = 215 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 15/221 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 G FI EGI+G GK+T IS + ++L + ++++TREPGGT ++ R +LL Sbjct: 2 KGHFIVLEGIDGCGKSTQISHISKWLPQSGLMPKNANLYITREPGGTTLGKSLRDLLLHE 61 Query: 58 GVDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E +++AA R +H+ ++I+P L +G ++ DRF S+ AYQG Sbjct: 62 HETNVPAPLTELLLYAADRAEHIHSLIQPKLDKGDWVISDRFSGSTLAYQGFGRGLDINL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L I+ Q ++P+ TI L + V ++R R D E + +K Sbjct: 122 IRRLDAIARQGLVPEITIFLKISVLTSMRR-------RAKKSADRMEAEGEGFLKKVASG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 F IA + ++ V+ I + ++ +S Sbjct: 175 FSRIANEEH--WITIEGEQDQALVSDEIKLAITNKLKNYIS 213 >gi|330877896|gb|EGH12045.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4] Length = 172 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 64/176 (36%), Positives = 97/176 (55%), Gaps = 6/176 (3%) Query: 40 EPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99 EPGGTP AE R +LL+ + A+ E ++ AAR H+ VIRPAL G+++LCDRF Sbjct: 1 EPGGTPLAERIRELLLAPSDEAMSADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFT 60 Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 D++YAYQG + L+E ++ PD T++ DLPV+IGL R R L Sbjct: 61 DATYAYQGGGRGLSQQRIAVLEEFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 114 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 D FE++ + R +L A+ P R +VD+A V ++ ++ +L++ R Sbjct: 115 DRFEQEGRAFFDAVRSTYLQRAKADPARYRLVDAAQPLADVQASLDTLLPQLLELR 170 >gi|58697581|ref|ZP_00372803.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans] gi|58535919|gb|EAL59679.1| thymidylate kinase [Wolbachia endosymbiont of Drosophila simulans] Length = 197 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 71/189 (37%), Positives = 110/189 (58%), Gaps = 15/189 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL ++ + + V +TREPGGT AE R VLL + Sbjct: 17 MFITFEGIDGSGKTTQSKLLANHFKQIHGENNVVLTREPGGTNFAEKIRGVLL---TNNI 73 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +H++ +I PAL EGKI++CDRF+DS+ AYQG S + L + Sbjct: 74 DPISELLLLISMRREHMKKLILPALAEGKIVICDRFIDSTIAYQGYGLSVDLGLIRDLHK 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T ILD+ V +GL R +++ + +E DV + K R+ F +IA Sbjct: 134 LV-EIKCPDITFILDIDVKVGLNRAKDK---------NKYEEMDVNFYNKVRKGFQEIAI 183 Query: 183 NQPDRCHIV 191 +P RC ++ Sbjct: 184 KEPVRCSVI 192 >gi|206973280|ref|ZP_03234202.1| thymidylate kinase [Bacillus cereus AH1134] gi|206732164|gb|EDZ49364.1| thymidylate kinase [Bacillus cereus AH1134] Length = 205 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 106/198 (53%), Gaps = 4/198 (2%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G KTT ++LL +L++++ DV +T+EPGGT E R +L++ + +E +F A Sbjct: 5 GFWKTTQLNLLHSYLKKRSIDVILTKEPGGTVIGEKLRELLVNNLEIKLERLSELFLFEA 64 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R + ++ +++P + GK ++ DR +D S AYQG +D L ++ + PD T Sbjct: 65 DRHETIKKIVKPNIKAGKFVISDRGIDGSVAYQGFGREIDLEVIDYLTSLATENKQPDLT 124 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I++D+ +I +R+ NR ++ +D F+ + + R+ FL +A+ P R VD Sbjct: 125 ILIDIDPEIAQQRIANRNNVD----IDKFDLEQLQFQANVRKGFLYMAKQNPKRIVTVDG 180 Query: 194 AHSFQSVATNILNIVWEL 211 + + + I+ ++ + Sbjct: 181 TLAIEDLHQKIVTLIKDF 198 >gi|189219648|ref|YP_001940289.1| Thymidylate kinase [Methylacidiphilum infernorum V4] gi|189186506|gb|ACD83691.1| Thymidylate kinase [Methylacidiphilum infernorum V4] Length = 225 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 3/211 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FISFEG EG GKTT I LLK+ L+ V + REPG T E R +L + + Sbjct: 17 KARFISFEGSEGCGKTTQIRLLKKRLEDHGQKVVIVREPGTTKLGEKLRRILKHSSLSLY 76 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +F A+R++ + VI P + + +L DRF+DS+ YQG ++ L E Sbjct: 77 -PLTELFLFEASRVELTKRVIEPEMAKNSWILADRFVDSTLVYQGIIRGIPLKTIEELNE 135 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + P TI+LD+P R++ R + D + + E+ RQ +L++A+ Sbjct: 136 LASSGIKPTLTILLDIPHQCSRSRIKKR--DHKKTITDRLQDEFEKSLEQIRQAYLELAQ 193 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +P R +IV S Q ++ I V + + Sbjct: 194 REPHRFYIVKGTDSPQFISALIWEKVENVFK 224 >gi|283779876|ref|YP_003370631.1| thymidylate kinase [Pirellula staleyi DSM 6068] gi|283438329|gb|ADB16771.1| thymidylate kinase [Pirellula staleyi DSM 6068] Length = 207 Score = 206 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 8/194 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+SF+G++GAGK+T I LL +L ++ +V V R+PGGTP E R +LL Sbjct: 1 MFLSFDGVDGAGKSTQIRLLAEWLAARSLEVVVCRDPGGTPLGEKLRSILLDDHETPIHR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E ++F A+R VE VIRPAL GK+++ DRFL ++ YQ + ++ +++ Sbjct: 61 RSEMLLFMASRAQLVEEVIRPALEAGKVVISDRFLLATAVYQAHAGGLVADDVWTVGKVA 120 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V +MP ++LD+P KR+ D E + + E+ RQ FL A Sbjct: 121 VGGMMPARVLLLDMPAAEASKRIA--------RAHDRMESQGLAYLERVRQGFLLEAERD 172 Query: 185 PDRCHIVDSAHSFQ 198 P +D+A Q Sbjct: 173 PQTIRAIDAARDPQ 186 >gi|68171235|ref|ZP_00544639.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa] gi|88658326|ref|YP_507050.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas] gi|123493813|sp|Q2GHN3|KTHY_EHRCR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|67999355|gb|EAM86000.1| Thymidylate kinase [Ehrlichia chaffeensis str. Sapulpa] gi|88599783|gb|ABD45252.1| thymidylate kinase [Ehrlichia chaffeensis str. Arkansas] Length = 202 Score = 206 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 116/213 (54%), Gaps = 21/213 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL +L +V +TREPGGT E+ R++L Sbjct: 1 MFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLTREPGGTLLNESVRNLLF--KAQGL 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +E + F A R +H +I+P+LM+ KI++CDRF+DS+ AYQG +D L + Sbjct: 59 DSLSELLFFIAMRREHFVKIIKPSLMQKKIVICDRFIDSTIAYQGYGQGIDCSLIDQLND 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + +V PD T I+D+ ++ L R +C + +E D+ + + R F DIA+ Sbjct: 119 LVI-DVYPDITFIIDVDINESLSR----------SCKNGYEFADMEFYYRVRDGFYDIAK 167 Query: 183 NQPDRCHIV-DSAHS-----FQSVATNILNIVW 209 P RCH++ D + + V ++ ++ Sbjct: 168 KNPHRCHVITDKSETYDIDDINFVHLEVIKVLQ 200 >gi|296284126|ref|ZP_06862124.1| thymidylate kinase [Citromicrobium bathyomarinum JL354] Length = 215 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 108/210 (51%), Gaps = 5/210 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+FEG EG GK+T L L D +TREPGGT AE R +LL + Sbjct: 7 KARFIAFEGGEGVGKSTQAKRLVEALSNHGIDALLTREPGGTTGAEMIRKLLLEPPGTGW 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AEA++FAAAR DHV I+PALM G+ ++CDRF+ SS AYQG + +L + Sbjct: 67 RVQAEALLFAAARSDHVAKAIKPALMAGRWVVCDRFVLSSRAYQGLAGGLGDEEVRTLHQ 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I + P TI+L+ P D +R++ R + D ++ H + F +A+ Sbjct: 127 IGSGGLQPCRTILLEAPGDDVAERLRKR----DGGEADAIGGRNARYHADVARGFAGLAQ 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + D +D++ S +V ++ + L+ Sbjct: 183 DD-DTIVQIDASGSADAVHEAVMRELAPLL 211 >gi|87301810|ref|ZP_01084644.1| Thymidylate kinase [Synechococcus sp. WH 5701] gi|87283378|gb|EAQ75333.1| Thymidylate kinase [Synechococcus sp. WH 5701] Length = 224 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 17/215 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSC 57 G F+ EGI+G+GK++ + L +L R + +REPGGTP + R +LL Sbjct: 8 RGRFLVLEGIDGSGKSSQLERLAAWLPRSGLMPAGASLVTSREPGGTPLGQGLRQLLLHP 67 Query: 58 GVDEFG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + A AE +++AA R HV+++I PAL G +L DRF S+ AYQG Sbjct: 68 PEEAAPVARAELLLYAADRAQHVQSLIEPALAAGHWVLSDRFAGSTAAYQGHGRGLSLDL 127 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +D L+ I+ + PD T+ LDLP+ I R +R + D E + E+ Sbjct: 128 IDQLEAIATGGLSPDLTLWLDLPLAISADRRGHRGA-------DRIEAAGLPFLERVSDG 180 Query: 177 FLDIARNQPDR-CHIVDSAHSFQSVATNILNIVWE 210 F +A +R VD+A S V + + + E Sbjct: 181 FAQLAA---ERGWSRVDAAGSPAEVESALRAALLE 212 >gi|284161466|ref|YP_003400089.1| thymidylate kinase [Archaeoglobus profundus DSM 5631] gi|284011463|gb|ADB57416.1| thymidylate kinase [Archaeoglobus profundus DSM 5631] Length = 199 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 103/210 (49%), Gaps = 19/210 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G+GKTT + L L+++ YDV +EP + + R +L + Sbjct: 1 MLIAVEGIDGSGKTTIVRFLVEELKKRGYDVVAFKEPTDSEYGKKIRQILK---ERKISP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E +F R +V N I PAL GK+++ DR+ S+ AYQG + +L E Sbjct: 58 EEELKLFIKDREFNVRNNILPALKSGKVVIMDRYYYSTIAYQGA-LGLDIGKIKTLNE-- 114 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q PD IILD+ + LKR++ + D FE D+ K R IFL + Sbjct: 115 -QFPKPDLVIILDVSPETALKRIKAK------RKPDRFE--DLEYLRKVRNIFLSL---- 161 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + ++D+ + V ++L +V E ++K Sbjct: 162 KNNIVVIDAERDIEEVKRDVLKVVLEHLEK 191 >gi|319760533|ref|YP_004124471.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF] gi|318039247|gb|ADV33797.1| thymidylate kinase [Candidatus Blochmannia vafer str. BVAF] Length = 211 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 10/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGV 59 MN+ FI EG++G+GKTT +S + ++ N + EPGGT +++ R ++ + + Sbjct: 1 MNN-KFIVVEGLDGSGKTTIVSKIVQYFNNNNITNLITVHEPGGTKISDSLRFLIKNGAI 59 Query: 60 DE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 DE E ++ AAR +EN+++PAL +G ++ DRF SS+AYQG FL Sbjct: 60 DESITNMTEVLMLYAARSQLLENIVKPALTKGDWVIGDRFDLSSFAYQGGGRGVDEFFLY 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + + + P LD+ +I L RV+NR LD E++ + K R+ + Sbjct: 120 LLSKSVINNLFPHLIFYLDIAPEISLLRVKNR------DKLDRIEKEPLSFFYKVREYYK 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +A Q + +++ S + V+ +I + + Sbjct: 174 KVAAIQKN-IITINANQSLEIVSRSIYQYLDVWL 206 >gi|72383332|ref|YP_292687.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A] gi|123620515|sp|Q46HP4|KTHY_PROMT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72003182|gb|AAZ58984.1| thymidylate kinase [Prochlorococcus marinus str. NATL2A] Length = 211 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 15/219 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 G FI FEGI+G+GKTT I+ L ++L +N + +TREPGGT ++ R +LL Sbjct: 2 KGKFIVFEGIDGSGKTTQINQLSKWLISSDLIPENNKLVITREPGGTKLGKSIRSLLLDT 61 Query: 58 GVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +++ + E +++AA R H+ +IRP L +G ++ DRF S+ AYQG Sbjct: 62 SIEKSPDSITELLLYAADRSQHINEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDINL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ Q + PD T +LD+P++ + R + D E++ Sbjct: 122 IKDLEAIATQGIAPDITFLLDIPIEESI-------RRRRNRKDDRIEKEGREFLSNVSLG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 F ++ + + + S + + + I + + +L++ + Sbjct: 175 FQALS--EDSNWKKISAIDSKEKIISEIKSEIKKLIKNK 211 >gi|320102453|ref|YP_004178044.1| thymidylate kinase [Isosphaera pallida ATCC 43644] gi|319749735|gb|ADV61495.1| thymidylate kinase [Isosphaera pallida ATCC 43644] Length = 224 Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 13/215 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G FI EG +G+GK+T SLL ++L+ + R+PGGT + R +LL Sbjct: 12 AGRFIVLEGPDGSGKSTQASLLAQWLRDAGVPLTTCRDPGGTRLGDRLRSILLDRHDCAI 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +++ A R V IRPAL +G +L DRFL S++ YQ + E Sbjct: 72 DMTTELLLYMAGRAQLVRERIRPALDQGHWVLSDRFLMSNWVYQCFAGGVDDRVFHQVAE 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V +PD T++LDL ++ L R D E + ++ RQ FL+ ++ Sbjct: 132 VAVGSTLPDLTLVLDLELETALART--------GGARDRIEDRSWEYRQRVRQGFLEASK 183 Query: 183 N----QPD-RCHIVDSAHSFQSVATNILNIVWELV 212 +P+ ++D++ + T + + V + Sbjct: 184 RRIAVKPEGEVRVLDASPCPDILLTRLQHEVRHAL 218 >gi|124024915|ref|YP_001014031.1| thymidylate kinase [Prochlorococcus marinus str. NATL1A] gi|166223099|sp|A2BZV6|KTHY_PROM1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123959983|gb|ABM74766.1| Thymidylate kinase [Prochlorococcus marinus str. NATL1A] Length = 211 Score = 205 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 15/219 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSC 57 G FI FEGI+G+GKTT I+ L ++L +N + +TREPGGT ++ R +LL Sbjct: 2 KGKFIVFEGIDGSGKTTQINQLSKWLISTDLIPENNKLVITREPGGTQLGKSIRSLLLDT 61 Query: 58 GVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +++ + E +++AA R HV +IRP L +G ++ DRF S+ AYQG Sbjct: 62 SIEKSPDSITELLLYAADRSQHVNEIIRPTLDQGDWVISDRFCGSTLAYQGYGRKLDITL 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ I+ Q + PD T +LD+P++ + R + D E++ Sbjct: 122 IKDLEAIATQGIAPDITFLLDIPIEESI-------RRRRNRKDDRIEKEGREFLSNVSLG 174 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 F ++ + + + S + + + I + + +L++ + Sbjct: 175 FQALS--EDSHWKKISAIDSKEKIISEIKSEIKKLIKNK 211 >gi|313678822|ref|YP_004056562.1| dTMP kinase [Mycoplasma bovis PG45] gi|312950663|gb|ADR25258.1| dTMP kinase [Mycoplasma bovis PG45] Length = 215 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 108/210 (51%), Gaps = 10/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT + L L + N VTREPGG +E R ++L Sbjct: 1 MFITFEGLDGSGKTTIVQKLVDKLLEQKPNLSFIVTREPGGKNVRESEKIRELILD-KES 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA+++ A+R H+E VI PAL E K++LCDR++DS YAYQG F L Sbjct: 60 HLSPIAEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E+ ++ +PD TI +D+ + R R R + D + + + H K + ++ Sbjct: 120 TEMVIENTVPDITIYIDITAEQSEYR---RNVSRLIS--DRLDSESLEFHRKVFDAYREV 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R +++ S + ++ +++ Sbjct: 175 ISLNPERFVVINGLQSIPEILDEVITKLFQ 204 >gi|56416439|ref|YP_153513.1| thymidylate kinase [Anaplasma marginale str. St. Maries] gi|81599204|sp|Q5PBS1|KTHY_ANAMM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56387671|gb|AAV86258.1| thymidylate kinase [Anaplasma marginale str. St. Maries] Length = 211 Score = 204 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 17/218 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G GKTT LL ++L + V +TREPGGT E R LL + Sbjct: 1 MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GKI++ DRF DS+ AYQG + L Sbjct: 61 DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +V+PD T ++D +++ L R L+ FE +++ R+ F I Sbjct: 121 LVA-DVVPDITFVIDASIELALART----------SLNGFENHGPEFYDRVREGFRTIVA 169 Query: 183 NQPDRCHIVDS-AHSFQSV---ATNILNIVWELVQKRV 216 N P RCH++D + + + V I+ + + Q ++ Sbjct: 170 NNPHRCHMIDCKSDAAEDVYSTHDRIVALFRAITQDKL 207 >gi|262366245|gb|ACY62802.1| thymidylate kinase [Yersinia pestis D182038] Length = 190 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 97/190 (51%), Gaps = 9/190 (4%) Query: 28 LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85 L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VENVI+P Sbjct: 5 LRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 64 Query: 86 ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145 AL G ++ DR SS AYQG + SL++ + E PD T+ LDLP +GL Sbjct: 65 ALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLA 124 Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205 R + R LD E++ + E+ R +L++A + +D++ + V+ +I Sbjct: 125 RARAR------GELDRIEQESLAFFERTRARYLELAASDAS-IKTIDASQPIEQVSASIS 177 Query: 206 NIVWELVQKR 215 + + + + Sbjct: 178 QALAQWLTNQ 187 >gi|222474809|ref|YP_002563224.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida] gi|255002779|ref|ZP_05277743.1| thymidylate kinase [Anaplasma marginale str. Puerto Rico] gi|255003913|ref|ZP_05278714.1| thymidylate kinase [Anaplasma marginale str. Virginia] gi|254808273|sp|B9KHK6|KTHY_ANAMF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|222418945|gb|ACM48968.1| thymidylate kinase (tmk) [Anaplasma marginale str. Florida] Length = 211 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 17/218 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G GKTT LL ++L + V +TREPGGT E R LL + Sbjct: 1 MFITFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GKI++ DRF DS+ AYQG + L Sbjct: 61 DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +V+PD T ++D +++ L R L+ FE +++ R+ F I Sbjct: 121 LVA-DVVPDITFVIDASIELALART----------SLNGFENHGPEFYDRVREGFRTIVA 169 Query: 183 NQPDRCHIVDS-AHSFQSV---ATNILNIVWELVQKRV 216 N P RCH++D + + + V I+ + + + ++ Sbjct: 170 NNPHRCHMIDCKSDAAEDVYSTHDRIVALFRAITKDKL 207 >gi|238749664|ref|ZP_04611169.1| Thymidylate kinase [Yersinia rohdei ATCC 43380] gi|238712319|gb|EEQ04532.1| Thymidylate kinase [Yersinia rohdei ATCC 43380] Length = 191 Score = 204 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 59/189 (31%), Positives = 97/189 (51%), Gaps = 9/189 (4%) Query: 28 LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85 L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VENVI+P Sbjct: 5 LRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 64 Query: 86 ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145 AL G ++ DR SS AYQG + SL++ + + PD T+ LDLP +GL Sbjct: 65 ALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGDFRPDLTLYLDLPPAVGLA 124 Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205 R + R LD E++ + E+ R +L++A VD++ + V+ +I Sbjct: 125 RARAR------GELDRIEQESLAFFERTRARYLELAAAD-STIKTVDASQPLEQVSESIR 177 Query: 206 NIVWELVQK 214 ++ + + + Sbjct: 178 QVLQQWLAR 186 >gi|73668631|ref|YP_304646.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro] gi|121722245|sp|Q46DH6|KTHY_METBF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|72395793|gb|AAZ70066.1| thymidylate kinase [Methanosarcina barkeri str. Fusaro] Length = 205 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 110/215 (51%), Gaps = 15/215 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I+ EGI+G+GK+T L++ + K + TREP GT +A + S + Sbjct: 2 RGKLITLEGIDGSGKSTVAEKLQKNPEIKAFKPVFTREPTRGTLTGDAVEKAIQS----D 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSL 120 AE +F A +H+ +I+PAL GKI++ DR+ DS YAYQG ++ L+ + Sbjct: 58 TDQFAELFLFTADHAEHLAKLIKPALENGKIVISDRYSDSRYAYQGITLKTRLENPLEWV 117 Query: 121 QEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +++ ++PD T + D+ +I ++R R FE+ + + R IFL Sbjct: 118 KDLHRSWTIVPDLTFLFDIRPEISIERCGKRGEQS------KFEK--LEFLQGVRAIFLK 169 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +A + P+R ++D++ S + + ++ + E + + Sbjct: 170 LAADDPERFVVIDASRSPEYIEKEVVKKILEFLSR 204 >gi|226330525|ref|ZP_03806043.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198] gi|225201320|gb|EEG83674.1| hypothetical protein PROPEN_04443 [Proteus penneri ATCC 35198] Length = 207 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 62/204 (30%), Positives = 103/204 (50%), Gaps = 9/204 (4%) Query: 17 KTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAA 74 KT+ I + L+ K ++ TREPGGTP AE R ++ ++ +AE ++ AA Sbjct: 9 KTSAIQTVIDTLKDKGITNLAFTREPGGTPLAEKLRELIKQGIEGEKVTDKAELLMLYAA 68 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTI 134 R+ +ENVI+PAL EGK ++ DR SS AYQG + SL+ + PD T+ Sbjct: 69 RVQLIENVIKPALAEGKWVIGDRHDLSSQAYQGGGRGLDKDLMLSLRNTVLGNFRPDLTL 128 Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 LDL IGL R + R LD E++ + + R+ + +A++ D +D++ Sbjct: 129 YLDLDPAIGLTRARAR------GELDRIEKESMDFFYRTRERYQALAKDD-DTIITIDAS 181 Query: 195 HSFQSVATNILNIVWELVQKRVSP 218 + V +I I+ + ++ + Sbjct: 182 QAIDKVQADIRQILTAWLVQQENK 205 >gi|239815834|ref|YP_002944744.1| thymidylate kinase [Variovorax paradoxus S110] gi|239802411|gb|ACS19478.1| thymidylate kinase [Variovorax paradoxus S110] Length = 220 Score = 204 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 16/215 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ GLF++ EGI+GAGK++H+ ++ + + V TREPGGTP AE R ++L Sbjct: 1 MSEGLFLTLEGIDGAGKSSHLDAMEALFKARGRTVVRTREPGGTPLAETLRGLVL---EQ 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+++ AAR DH+ VI PAL G ++LCDRF D+++AYQG L +L Sbjct: 58 AMDPLTESLLVFAARRDHIVQVIEPALARGDVVLCDRFTDATFAYQGAGRDFDTQLLSTL 117 Query: 121 QEISVQE-------VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++ + P T+ DL +I +R+ + D FE + V + Sbjct: 118 EQWVQGGRGAAGQLLQPHITLWFDLAPEIAAERLAG------ARLPDKFESQPVEFFRRV 171 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + A R +D++ + V + + Sbjct: 172 AAGYAARAAADAQRFVRIDASQTRDQVWQQVETAL 206 >gi|161869607|ref|YP_001598774.1| thymidylate kinase [Neisseria meningitidis 053442] gi|161595160|gb|ABX72820.1| thymidylate kinase [Neisseria meningitidis 053442] Length = 173 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 7/173 (4%) Query: 36 HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 TREPGGTP EA R +LL+ G AE ++ AAR+ H+E+VI PAL +G ++ Sbjct: 2 LFTREPGGTPVGEALREILLNPETKA-GLRAETLMMFAARMQHIEDVILPALSDGIHVVS 60 Query: 96 DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 DRF D+++AYQG ++ L+ + PD T++LD+P+++ + R+ Sbjct: 61 DRFTDATFAYQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQ------ 114 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + D FE++ + R ++L+ A P+R I+DS S V +I ++ Sbjct: 115 TREKDRFEQEQADFFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNSIEKVL 167 >gi|56751420|ref|YP_172121.1| thymidylate kinase [Synechococcus elongatus PCC 6301] gi|56686379|dbj|BAD79601.1| thymidylate kinase [Synechococcus elongatus PCC 6301] Length = 177 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 87/178 (48%), Gaps = 8/178 (4%) Query: 35 VHVTREPGGTPAAEAARHVLL--SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92 + TREPG T +A R +LL AE +++AA R HVE V+RP L G + Sbjct: 2 IVATREPGDTALGQALRSLLLTQDWADQPLQPMAELLLYAADRAQHVETVLRPQLAAGAV 61 Query: 93 LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 ++CDR++DS+ AYQG + L ++ + D T+ LDLPV I +R Q R Sbjct: 62 VVCDRYVDSTVAYQGYGRGLDQSAIAQLNALATAGLRSDLTLWLDLPVAIAAERCQAR-- 119 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 D E + E+ RQ F IA +PDR +D+A VA I +V + Sbjct: 120 ----GQGDRMEAAGLAFQERLRQGFQAIAAAEPDRVVRIDAAGDPDQVAARIQAVVQQ 173 >gi|254994671|ref|ZP_05276861.1| thymidylate kinase [Anaplasma marginale str. Mississippi] Length = 211 Score = 202 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 17/218 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +F++FEGI+G GKTT LL ++L + V +TREPGGT E R LL + Sbjct: 1 MFVTFEGIDGCGKTTQAVLLAKYLSDLYGEHRVVLTREPGGTSLNELIRGALLGLTDYKL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++F A R + V+ P L+ GKI++ DRF DS+ AYQG + L Sbjct: 61 DGITELMLFIAMRRESFVKVVLPGLLAGKIVISDRFTDSTVAYQGYGCGVDLALVGMLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +V+PD T ++D +++ L R L+ FE +++ R+ F I Sbjct: 121 LVA-DVVPDITFVIDASIELALART----------SLNGFENHGPEFYDRVREGFRTIVA 169 Query: 183 NQPDRCHIVDS-AHSFQSV---ATNILNIVWELVQKRV 216 N P RCH++D + + + V I+ + + + ++ Sbjct: 170 NNPHRCHMIDCKSDAAEDVYSTHDRIVALFRAITKDKL 207 >gi|254430315|ref|ZP_05044018.1| thymidylate kinase [Cyanobium sp. PCC 7001] gi|197624768|gb|EDY37327.1| thymidylate kinase [Cyanobium sp. PCC 7001] Length = 213 Score = 202 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 19/215 (8%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSC-GV 59 EGI+G GKTT + L R+L+ + + VTREPGGTP A R +LL G Sbjct: 2 VLEGIDGCGKTTQLQALSRWLESSEAGCLPPDRQLIVTREPGGTPLGRALRELLLHPPGG 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G AE +++AA R HVE+ IRPAL G +L DRF S+ AYQG + Sbjct: 62 AAPGTTAELLLYAADRAQHVEHTIRPALAAGHWVLSDRFSGSTAAYQGHGRGLDLDLIQQ 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ ++ + PD T+ LDLP++ L R D E E+ F Sbjct: 122 LEAVATAGLQPDLTLWLDLPLEDSL-------RRRGGRAADRIEAAGAGFLERVAGGFAS 174 Query: 180 IARNQPDR-CHIVDSAHSFQSVATNILNIVWELVQ 213 +A +R +D+ V + + L Q Sbjct: 175 LAE---ERGWLRIDATAPADRVTAACRDALLGLAQ 206 >gi|238762196|ref|ZP_04623168.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638] gi|238699543|gb|EEP92288.1| Thymidylate kinase [Yersinia kristensenii ATCC 33638] Length = 191 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Query: 28 LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85 L + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VENVI+P Sbjct: 5 LHAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 64 Query: 86 ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145 AL G ++ DR SS AYQG + SL++ + PD T+ LDLP +GL Sbjct: 65 ALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGAFRPDLTLYLDLPPVVGLA 124 Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205 R + R LD E++ + E+ R +L++A +D++ + V+ +I Sbjct: 125 RARAR------GELDRIEQESLDFFERTRARYLELAAADSS-IKTIDASQPLEQVSESIS 177 Query: 206 NIVWELVQKR 215 ++ + + +R Sbjct: 178 RVLKQWLTRR 187 >gi|284931760|gb|ADC31698.1| Thymidylate kinase [Mycoplasma gallisepticum str. F] Length = 210 Score = 202 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 115/214 (53%), Gaps = 10/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G+FI EG++G+GK++ + ++ + + +REPGG +EA R +++ Sbjct: 1 MKKGVFIVIEGVDGSGKSSFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMKLSN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EA++F A+R +H++ I PAL E KI++CDRF+ SS+ YQG ++ + + Sbjct: 61 S--DPLTEALLFCASRNEHLKKKILPALNENKIVICDRFVVSSWIYQGLIKNAGYEKVKK 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E + PD TI+ D+ +I KR+ R ++ LD + ++ + K R +L+ Sbjct: 119 INECVTDGLEPDLTILFDVDPEIAAKRISERSTM---NHLDTYTKERID---KIRNAYLE 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ + I++++ ++ ++NI+ V+ Sbjct: 173 RLKDNK-KAKIINASLDLDTIYDQVVNIITLFVK 205 >gi|15828523|ref|NP_325883.1| thymidylate kinase (dTMP kinase) [Mycoplasma pulmonis UAB CTIP] gi|23821806|sp|Q98RF7|KTHY_MYCPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|14089465|emb|CAC13225.1| THYMIDYLATE KINASE (DTMP KINASE) [Mycoplasma pulmonis] Length = 234 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 117/213 (54%), Gaps = 14/213 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSCGVD 60 +FI+FEGI+ +GKT+ ++ LK + +KN T EPGG +P + RH++L+ + Sbjct: 14 MFITFEGIDASGKTSLLAKLKAHVVQKNLQGKCTFTWEPGGRKSPEIQTIRHLILNKESN 73 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AEA ++++AR H++ VI P L + K++ CDRF+DSS+AYQ + L Sbjct: 74 -LSPIAEAFLYSSARRIHLDKVILPNLAKNKVVFCDRFVDSSFAYQAFGRDLGFEKIKLL 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++ + PD T IL + + ++R + R D E+++ ++K + + + Sbjct: 133 NELATDKKYPDITFILKISYEESMERRKARQEDE-----DRLEKEENSFYQKVIKGYDFL 187 Query: 181 ARNQPD---RCHIVDSAHSFQSVATNILNIVWE 210 A + P+ R ++D++ + + + ++L I+ + Sbjct: 188 A-SYPEFQKRIFVIDASKNQEEIFESVLKILKD 219 >gi|257471409|ref|ZP_05635408.1| thymidylate kinase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|311086090|gb|ADP66172.1| thymidylate kinase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086664|gb|ADP66745.1| thymidylate kinase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087767|gb|ADP67846.1| thymidylate kinase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 219 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 9/211 (4%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEFGAE 65 EG+EGAGKT +K L++ + V + R+PG TP AE R ++ D E Sbjct: 15 VIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKE 74 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR+ VE I+PAL G ++ DR SS AYQG + LQ + + Sbjct: 75 TELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFL 134 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 +PD TI LD+ +IGL R R LD E + + +K R+ +L+ ++ Sbjct: 135 NNFIPDLTIYLDVSPEIGLARALKR------NPLDLIESRSLFFFKKTRRCYLEKSKLDK 188 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 I+++ + + V NI + + K+V Sbjct: 189 KTI-IINANLNIKKVTQNITKKMLNWLNKQV 218 >gi|302553088|ref|ZP_07305430.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736] gi|302470706|gb|EFL33799.1| thymidylate kinase [Streptomyces viridochromogenes DSM 40736] Length = 547 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 8/176 (4%) Query: 37 VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +TREPG TP + R +LL AEA+++AA R +HV+ V+RPAL G +++ D Sbjct: 2 LTREPGATPVGKRLRSILLDVSSAGLSHRAEALLYAADRAEHVDTVVRPALERGAVVISD 61 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 R++DSS AYQG + + + ++P T++LD+ + +R + Sbjct: 62 RYIDSSVAYQGAGRDLSPTEIARINRWATNGLVPHLTVLLDVAPETARERF--------T 113 Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 D E + H + R FL +A R +VD+ ++V T I + + +++ Sbjct: 114 EAPDRLESEPAEFHARVRAGFLTLAAADAGRYLVVDAGQEAEAVTTVIRHRLDQVL 169 >gi|298674964|ref|YP_003726714.1| thymidylate kinase [Methanohalobium evestigatum Z-7303] gi|298287952|gb|ADI73918.1| thymidylate kinase [Methanohalobium evestigatum Z-7303] Length = 199 Score = 201 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 16/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T L N V TREP +A + S + Sbjct: 2 KGKLITLEGIDGSGKSTITERLMNHPSLSN--VVFTREPTKNWIGKAVEQAIRS----DT 55 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQ 121 AE +F + +H+ I PA+ GK ++ DR+LDS AYQG S + + +Q Sbjct: 56 DQIAEFFLFTSDHAEHISKTIYPAIENGKNVISDRYLDSRCAYQGVTLSEKFEDPIKWVQ 115 Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I ++PD TI LD+ + ++R NR FE+ + ++ + + Sbjct: 116 KIHDGWTIIPDLTIFLDIDPEFAIERCGNRGEQT------KFEK--MEFLQQVYDNYQRL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ P+R +VDS+ + V ++++I+ + Sbjct: 168 MKDNPERFVVVDSSQPIEEVEKDVVDIITSYI 199 >gi|58584408|ref|YP_197981.1| thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75498064|sp|Q5GTD5|KTHY_WOLTR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58418724|gb|AAW70739.1| Thymidylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 205 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 25/212 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKT LL + ++ + + + +TREPGGT AE R +LL D Sbjct: 1 MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLK---DSI 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E ++ + R +HV+ VI PAL +GKI++CDRF+DS+ AYQG + L + Sbjct: 58 DPVSELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T ILD+ V IGL R ++ + +E ++ + K R+ F +IA Sbjct: 118 LV-KIKYPDTTFILDIDVQIGLSRAMDK---------NKYEEMNISFYNKVRKGFQEIAI 167 Query: 183 NQPDRCHIV------DSAHSFQSVATNILNIV 208 N+PDRC I+ D+ V I+N V Sbjct: 168 NEPDRCSIITEIEAKDNNQ----VHVEIVNKV 195 >gi|20093219|ref|NP_619294.1| thymidylate kinase [Methanosarcina acetivorans C2A] gi|23821774|sp|Q8THS9|KTHY_METAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|19918569|gb|AAM07774.1| thymidylate kinase Tmk [Methanosarcina acetivorans C2A] Length = 206 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 108/214 (50%), Gaps = 13/214 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T L+ + + ++ TREP A + D+ Sbjct: 2 RGKLITLEGIDGSGKSTVAKKLQENSELRVFEPVFTREPTRGTLTGNAVENAIQSDTDQL 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQ 121 AE +F A +H+ +++PAL +GK ++ DR+ DS YAYQG ++ L+ ++ Sbjct: 62 ---AELFLFTADHAEHLAKLVKPALEDGKTVISDRYSDSRYAYQGITLKNRLDNPLEWVR 118 Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V+PD T + D+ +I +KR R FE+ + R++FL + Sbjct: 119 DLHRGWTVIPDLTFLFDIEPEIAVKRCGKRGEQT------KFEK--IEFLRGVRELFLGL 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A +P+R IVD++ S + V ++ + + VQ+ Sbjct: 171 AAEEPERFVIVDASGSPEDVEKAVVQKILDFVQR 204 >gi|311087248|gb|ADP67328.1| thymidylate kinase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] Length = 219 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 9/211 (4%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSC-GVDEFGAE 65 EG+EGAGKT +K L++ + V + R+PG TP AE R ++ D E Sbjct: 15 VIEGLEGAGKTNACICIKNLLKKNSIKNVLLVRQPGSTPIAEDIRRLIKKKFNDDNLIKE 74 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++ AAR+ VE I+PAL G ++ DR SS AYQG + LQ + + Sbjct: 75 TELLLMYAARIQLVEKKIKPALKNGIWVISDRHDLSSLAYQGGGLGIPKKIIYQLQSLFL 134 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 +PD T+ LD+ +IGL R R LD E + + +K R+ +L+ ++ Sbjct: 135 NNFIPDLTVYLDVSPEIGLARALKR------NPLDLIESRSLFFFKKTRRCYLEKSKLDK 188 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 I+++ + + V NI + + K+V Sbjct: 189 KTI-IINANLNIKKVTQNITKKMLNWLNKQV 218 >gi|269114872|ref|YP_003302635.1| thymidylate kinase (dTMP kinase) [Mycoplasma hominis] gi|268322497|emb|CAX37232.1| Thymidylate kinase (dTMP kinase) [Mycoplasma hominis ATCC 23114] Length = 213 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 62/214 (28%), Positives = 108/214 (50%), Gaps = 9/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPG--GTPAAEAARHVLLS 56 M+ G F+ FEG++G+GKTT I LK +L+ KN D TREPG + AE R ++L Sbjct: 1 MSKGKFVVFEGMDGSGKTTIIKKLKEYLESKNRLDDFVFTREPGSSHSKEAEEIRQLILD 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + F +A++FAA+R ++E + P L + K ++ DR+ SS+ YQG Sbjct: 61 -NDNSFSVMVDALLFAASRRLNLEKCVWPGLKKNKTVISDRYWTSSFVYQGVLGGLGLKK 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + I+ +E PD TI D+ ++ ++R+ D E +V ++K R Sbjct: 120 VKDINNIATEETTPDLTIFFDMEPELSVERITQ----IRKTKTDRLESTNVEYYKKLRDS 175 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + ++ I+ S + + +LN++ E Sbjct: 176 YWYVINQGNEKYEIIKSDCNIDELFKRVLNVLKE 209 >gi|21672617|ref|NP_660684.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|21623249|gb|AAM67895.1| thymidylate kinase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 213 Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 9/218 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGKT ++R L+ N V + R+PG TP AE R ++ + Sbjct: 2 MIKSKFIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTY 61 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++F E E ++ AAR+ V+ +I+PAL +G ++ DR SS AYQG + ++ Sbjct: 62 IEDFEKETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLIN 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ + +Q+ +PD TI LD+ +IGLKR R LD E + + +K R +L Sbjct: 122 KLKYLFLQDFIPDLTIYLDVYPEIGLKRASKR------NHLDRIEHRSLTFFKKTRASYL 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + I + + + V NI N + + +Q++V Sbjct: 176 KNIKLDKKIIKIN-ANLNIKIVTQNIKNQILKWLQQKV 212 >gi|25008682|sp|Q8K9J3|KTHY_BUCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 212 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 9/218 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 M FI EG+EGAGKT ++R L+ N V + R+PG TP AE R ++ + Sbjct: 1 MIKSKFIVIEGLEGAGKTHACICVQRILKENNIKNVILVRQPGSTPVAEKIRKLIKNNTY 60 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++F E E ++ AAR+ V+ +I+PAL +G ++ DR SS AYQG + ++ Sbjct: 61 IEDFEKETELLLMYAARIQLVKKIIQPALKKGTWVISDRHDLSSLAYQGGGLGIKRKLIN 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ + +Q+ +PD TI LD+ +IGLKR R LD E + + +K R +L Sbjct: 121 KLKYLFLQDFIPDLTIYLDVYPEIGLKRASKR------NHLDRIEHRSLTFFKKTRASYL 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + I + + + V NI N + + +Q++V Sbjct: 175 KNIKLDKKIIKIN-ANLNIKIVTQNIKNQILKWLQQKV 211 >gi|88607927|ref|YP_504721.1| thymidylate kinase [Anaplasma phagocytophilum HZ] gi|123495836|sp|Q2GLN0|KTHY_ANAPZ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|88598990|gb|ABD44460.1| thymidylate kinase [Anaplasma phagocytophilum HZ] Length = 219 Score = 200 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 20/226 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G GKTT LL +++ + V +TREPGGT E R V LS + Sbjct: 1 MFITFEGIDGCGKTTQSILLAKYMSDLYGEDNVVLTREPGGTSFNELLRSVFLSVSDYKV 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E +F A R + V+ AL KI++ DR +DS+ AYQG + L Sbjct: 61 DKLTELFLFLAMRRESFVKVVESALRANKIVISDRCVDSTVAYQGYGCGIDLDLIYKLNS 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + ++PD T I+D+ ++ L R +E + + K R+ F IA Sbjct: 121 LVM-GIVPDMTFIIDIDIEKALSRATRNG----------YESNSMDFYHKVRKGFQRIAE 169 Query: 183 NQPDRCHIV-------DSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + RC ++ + SV I+ ++ ++ ++ SS Sbjct: 170 EEKHRCVLLRCDDYEENGICDVYSVHNKIVGLLQGVLHNKMDAASS 215 >gi|330984099|gb|EGH82202.1| thymidylate kinase [Pseudomonas syringae pv. lachrymans str. M301315] Length = 214 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 5/213 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I +G G K+T + L + L + ++V T EPGGTP E R + S E Sbjct: 3 KKGLVICIDGSNGGFKSTTLKALAQHLSSQGHEVICTAEPGGTPIGEKIRVLTRSPENSE 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++FAAAR +VE VIRPA+ G I L DRF SS A+Q + + Sbjct: 63 MSPLSNMLLFAAARAQNVEQVIRPAIERGCICLVDRFSSSSRAFQHAGQGMPLSLVSEID 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I+ V D T+I DL +GL+R + A D FE ++ R +L A Sbjct: 123 AIARDGVAADYTLIFDLDPKLGLER-----NGGGKAADDKFELTGFEFLDRVRADYLVQA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P+R ++D++ ++ V + + V + + Sbjct: 178 AEAPERFEVIDASRPYEQVLKSAIEAVDRYLAR 210 >gi|294660635|ref|NP_853503.2| thymidylate kinase [Mycoplasma gallisepticum str. R(low)] gi|298286819|sp|Q7NAD7|KTHY_MYCGA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|284812298|gb|AAP57071.2| Thymidylate kinase [Mycoplasma gallisepticum str. R(low)] gi|284931003|gb|ADC30942.1| Thymidylate kinase [Mycoplasma gallisepticum str. R(high)] Length = 210 Score = 199 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 114/214 (53%), Gaps = 10/214 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G+FI EG++G+GK++ + ++ + + +REPGG +EA R +++ Sbjct: 1 MKKGVFIVIEGVDGSGKSSFLKRMMNEHTMINSQPIIYSREPGGCDTSEAVRELIMKLSN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 EA++F A+R +H++ I PAL E KI +CDRF+ SS+ YQG ++ + + Sbjct: 61 S--DPLTEALLFCASRNEHLKKKILPALNENKIAICDRFVVSSWIYQGLIKNAGYEKVKK 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + E + PD TI+ D+ +I KR+ R ++ LD + ++ + K R +L+ Sbjct: 119 INEYVTDGLEPDLTILFDVDPEIAAKRISERSTM---NHLDAYTKERI---NKIRNAYLE 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ + I++++ +V ++NI+ V+ Sbjct: 173 RLKDNK-KAKIINASLDLDTVYDQVVNIITLFVK 205 >gi|71893607|ref|YP_279053.1| thymidylate kinase [Mycoplasma hyopneumoniae J] Length = 213 Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 12/210 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLS 56 MN +FISFEGI+ +GK+T + L ++L+ K ++ T EPGG EA R LLS Sbjct: 1 MN--MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLS 58 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + Sbjct: 59 -KNNQISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDL 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + SL + + PD TI LD+ + +R+ + D E + V +EK Sbjct: 118 VTSLNSLISENTFPDLTIFLDIKISKAFERM----GIFRDHNRDRLENRGVEFYEKVING 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + +A+ + +D ++ V I++ Sbjct: 174 YEFLAKKNKN-FFKIDGNGTYDEVLDLIID 202 >gi|73667393|ref|YP_303409.1| thymidylate kinase [Ehrlichia canis str. Jake] gi|123614707|sp|Q3YR44|KTHY_EHRCJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|72394534|gb|AAZ68811.1| thymidylate kinase [Ehrlichia canis str. Jake] Length = 202 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 110/213 (51%), Gaps = 21/213 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL +L + +V +TREPGGT EA R +L Sbjct: 1 MFITFEGIDGSGKTTQSHLLTEYLSKIYGVNNVVLTREPGGTLLNEAVRDLLFQ--AKGL 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +E + F A R +H VI+P+LM+ KI++CDRF+DS+ AYQG + L + Sbjct: 59 DSLSELLFFIAMRREHFMKVIKPSLMQKKIVVCDRFIDSTIAYQGYGQGIDCNLICQLND 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V ++ PD T ++D+ V L R +C + +E ++ + + R F I Sbjct: 119 LVV-DMYPDITFVIDVDVHESLSR----------SCKNGYEFAELEFYYRVRNGFYSIVE 167 Query: 183 NQPDRCHIV-DSA-----HSFQSVATNILNIVW 209 P RCHI+ D+ + I+ ++ Sbjct: 168 KNPHRCHIITDNNEICDIDGINLIHLKIVKVLQ 200 >gi|148377947|ref|YP_001256823.1| thymidylate kinase [Mycoplasma agalactiae PG2] gi|229621732|sp|A5IZC6|KTHY_MYCAP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|148291993|emb|CAL59385.1| Thymidylate kinase [Mycoplasma agalactiae PG2] Length = 215 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 10/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT + L L K VTREPGG +E R ++L Sbjct: 1 MFITFEGLDGSGKTTIVQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILD-KES 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +EA+++ A+R H+E VI PAL E K++LCDR++DS YAYQG F L Sbjct: 60 RLSPISEALLYTASRRIHIEKVILPALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E+ ++ +PD TI +D+ + R R R + D + + + H+K + ++ Sbjct: 120 TEMVIESTIPDITIFIDITAEQSEYR---RNVSRLIS--DRLDSESLEFHKKVFDAYKEV 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R IV+ S + I+ +++ Sbjct: 175 INLDPKRFIIVNGLQSIPEILDEIVEKLFQ 204 >gi|291066996|gb|ADD74112.1| dTMP kinase [Rickettsia felis] Length = 227 Score = 198 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 6/193 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG++G+GK+T +LK +L ++ V TREPGGT AE R +L+ + Sbjct: 8 KRGRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVHRDLLP 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E + AAR DH+ I PA+ G ++CDRF+DS+ YQG S + SL Sbjct: 68 MS---ELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVYSLH 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQIFL 178 + + +MPD T +D+ + ++RV+ R S+ + F+ KD+ ++K F Sbjct: 125 KKLMPSIMPDITFFIDIEPVLAMERVKVRNGSDYSSSNLRNNRFDIKDLDYYKKIHNGFR 184 Query: 179 DIARNQPDRCHIV 191 +A R + Sbjct: 185 TLADKYLKRIKTI 197 >gi|67459806|ref|YP_247429.1| thymidylate kinase [Rickettsia felis URRWXCal2] gi|67459875|ref|YP_247497.1| thymidylate kinase [Rickettsia felis URRWXCal2] gi|67005339|gb|AAY62264.1| Thymidylate kinase [Rickettsia felis URRWXCal2] gi|67005408|gb|AAY62332.1| Thymidylate kinase [Rickettsia felis URRWXCal2] Length = 227 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 62/193 (32%), Positives = 99/193 (51%), Gaps = 6/193 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG++G+GK+T +LK +L ++ V TREPGGT AE R +L+ + Sbjct: 8 KRGRFITLEGVDGSGKSTQCRILKEYLISRDIPVMSTREPGGTEIAEEMRSILVHRDLLP 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E + AAR DH+ I PA+ G ++CDRF+DS+ YQG S + SL Sbjct: 68 MS---ELLQVMAARYDHIVKKILPAIEAGYTVICDRFIDSTVVYQGLEIDSGMELVYSLH 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQIFL 178 + + +MPD T +D+ + ++RV+ R S+ + F+ KD+ ++K F Sbjct: 125 KKLMPSIMPDITFFIDIEPVLAMERVKVRNGSNYSSSNLRNNRFDIKDLDYYKKIHNGFR 184 Query: 179 DIARNQPDRCHIV 191 +A R + Sbjct: 185 TLADKYLKRIKTI 197 >gi|54020350|ref|YP_115634.1| thymidylate kinase [Mycoplasma hyopneumoniae 232] gi|59798155|sp|Q601T1|KTHY_MYCH2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|166221830|sp|Q4AA79|KTHY_MYCHJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|53987523|gb|AAV27724.1| thymidylate kinase [Mycoplasma hyopneumoniae 232] gi|144227537|gb|AAZ44342.2| thymidylate kinase [Mycoplasma hyopneumoniae J] Length = 211 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K ++ T EPGG EA R LLS + Sbjct: 1 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALQIREFLLS-KNN 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 60 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI LD+ + +R+ + D E + V +EK + + Sbjct: 120 NSLISENTFPDLTIFLDIKISKAFERM----GIFRDHNRDRLENRGVEFYEKVINGYEFL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 A+ + +D ++ V I++ Sbjct: 176 AKKNKN-FFKIDGNGTYDEVLDLIID 200 >gi|308190301|ref|YP_003923232.1| dTMP kinase [Mycoplasma fermentans JER] gi|319777695|ref|YP_004137346.1| thymidylate kinase [Mycoplasma fermentans M64] gi|307625043|gb|ADN69348.1| dTMP kinase [Mycoplasma fermentans JER] gi|318038770|gb|ADV34969.1| Thymidylate kinase [Mycoplasma fermentans M64] Length = 218 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 12/205 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN----YDVHVTREPGGTPA--AEAARHVLLSCG 58 +FI+FEG +G+GKTT I+ L L K + +TREPGG AE R ++L Sbjct: 1 MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNYVLTREPGGKDIIEAEKIRSLILD-K 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + +EA+++ +R H+E V+ PAL E +++LCDR++DS +AYQG + F+ Sbjct: 60 DSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFVK 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + + + MPD TI ++ + R R +R + D + + + H+K + + Sbjct: 120 KLTNLIIDKTMPDITIFFEIKPEESKIR---REQIRIVS--DRLDSETELFHQKVYKGYH 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN 203 ++ + + DR +VD+ S + V Sbjct: 175 ELIKKEKDRFIVVDATKSIEEVLKE 199 >gi|238810242|dbj|BAH70032.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 220 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 63/205 (30%), Positives = 110/205 (53%), Gaps = 12/205 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN----YDVHVTREPGGTPA--AEAARHVLLSCG 58 +FI+FEG +G+GKTT I+ L L K + +TREPGG AE R ++L Sbjct: 3 MFITFEGPDGSGKTTIINRLIIELIEKYPKLALNYVLTREPGGKDIIEAEKIRSLILD-K 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + +EA+++ +R H+E V+ PAL E +++LCDR++DS +AYQG + F+ Sbjct: 62 DSKLSSVSEALLYTTSRRIHLERVVWPALKENRLVLCDRYVDSFFAYQGYARNLGITFVK 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + + + MPD TI ++ + R R +R + D + + + H+K + + Sbjct: 122 KLTNLIIDKTMPDITIFFEIKPEESKIR---REQIRIVS--DRLDSETELFHQKVYKGYH 176 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN 203 ++ + + DR +VD+ S + V Sbjct: 177 ELIKKEKDRFIVVDATKSIEEVLKE 201 >gi|57239472|ref|YP_180608.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58579450|ref|YP_197662.1| thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58617504|ref|YP_196703.1| thymidylate kinase [Ehrlichia ruminantium str. Gardel] gi|73920817|sp|Q5FG91|KTHY_EHRRG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920818|sp|Q5HAD6|KTHY_EHRRW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|57161551|emb|CAH58478.1| putative thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58417116|emb|CAI28229.1| Thymidylate kinase [Ehrlichia ruminantium str. Gardel] gi|58418076|emb|CAI27280.1| Thymidylate kinase [Ehrlichia ruminantium str. Welgevonden] Length = 202 Score = 197 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 108/210 (51%), Gaps = 18/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 +FI+FEGI+G+GKTT LL +L D V +TREPGGT E+ R++L S Sbjct: 1 MFITFEGIDGSGKTTQSRLLTEYLSGVYGVDNVILTREPGGTFFNESVRNLLFSTKN--L 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E + F A R +H VI+PAL + KI++CDRF+DS+ AYQG ++ L + Sbjct: 59 DKLSELLFFIAMRREHFMKVIKPALTQQKIVICDRFIDSTIAYQGYGHGIDCKLIEELND 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V ++ P+ T +LD ++ + R +E D+ + + R F DI + Sbjct: 119 LVV-DIYPNITFVLDSDINQSVARSNKNG----------YEFLDLEFYARVRDGFRDIVK 167 Query: 183 NQPDRCHIV---DSAHSFQSVATNILNIVW 209 RC+++ D+ + ++ L + Sbjct: 168 RNQYRCYLITNVDATKNINEISAIYLKTIK 197 >gi|146320508|ref|YP_001200219.1| thymidylate kinase [Streptococcus suis 98HAH33] gi|145691314|gb|ABP91819.1| Thymidylate kinase [Streptococcus suis 98HAH33] Length = 169 Score = 197 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 4/170 (2%) Query: 46 AAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 AE R+++L+ + E ++F AAR H++ I P L +GK+LL DRF+DSS AY Sbjct: 3 IAEEIRNIILNPANTAMDDKTELLLFIAARRQHLKEKILPPLAQGKLLLIDRFIDSSIAY 62 Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 QG + L + + + PD T+ D+ + GL R+ +D + + Sbjct: 63 QGFGRGLDIGDIHWLNQFATDGLKPDLTLYFDIDTEEGLARIARNADRD----VDRLDME 118 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +H + RQ +L I +P+R +D++ ++V N L ++ + +R Sbjct: 119 KADMHRRVRQGYLSILEQEPERFVKIDASQPLEAVVANALAVIKKRFAER 168 >gi|320107127|ref|YP_004182717.1| thymidylate kinase [Terriglobus saanensis SP1PR4] gi|319925648|gb|ADV82723.1| thymidylate kinase [Terriglobus saanensis SP1PR4] Length = 217 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 60/217 (27%), Positives = 99/217 (45%), Gaps = 8/217 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-- 60 +G FISFEG++G+GKTT + L+ FL + +V R+PGGT + R V+L + Sbjct: 2 AGFFISFEGLDGSGKTTQLRRLETFLIGRGREVVSLRQPGGTALGDRIRAVVLDSKTEAA 61 Query: 61 --EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E + A R + VI PAL GKI+LCDR+ DS+ AYQG + Sbjct: 62 VGKIAPMTEMALMFADRAQAIAEVILPALEAGKIVLCDRWTDSTEAYQGGGRGLGAEKVL 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA---CLDYFERKDVMIHEKRRQ 175 + ++ P TI+L + LKR + R +A + FE + + + Sbjct: 122 EMHHAVCGDLWPALTILLLPDLQASLKRARRRNDRHIAAVGTDENRFETEGDGFYGRIHA 181 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ I + R + + V + + V + + Sbjct: 182 VYTAIGYREKARVVTI-GDGNLDEVEAAVRSAVLQRI 217 >gi|213054494|gb|ACJ39423.1| thymidine monophospho kinase [Staphylococcus aureus] gi|213054496|gb|ACJ39424.1| thymidine monophospho kinase [Staphylococcus aureus] Length = 176 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 104/184 (56%), Gaps = 8/184 (4%) Query: 19 THISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDH 78 T I+ + L K+YDV +TREPGG P E R ++L ++ EA++FAA+R +H Sbjct: 1 TVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEG--NDMDIRTEAMLFAASRREH 57 Query: 79 VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL 138 + + PAL EGK++LCDR++DSS AYQG + +L E ++ + PD TI L++ Sbjct: 58 LVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNV 117 Query: 139 PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198 ++G +R+ ++ S + +++D+ HEK + + +I N+ R V++ + Sbjct: 118 SAEVGRERI-----IKNSRDQNRLDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLE 172 Query: 199 SVAT 202 +V Sbjct: 173 NVVE 176 >gi|91773625|ref|YP_566317.1| thymidylate kinase [Methanococcoides burtonii DSM 6242] gi|121691672|sp|Q12VF9|KTHY_METBU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|91712640|gb|ABE52567.1| Thymidylate kinase [Methanococcoides burtonii DSM 6242] Length = 201 Score = 196 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 106/213 (49%), Gaps = 16/213 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK+T L + T+EP + +A + S + Sbjct: 2 KGKLITLEGIDGSGKSTITRFLNSH--PAFANAVFTKEPTTSWIGDAVYKAIQSDTDE-- 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-HLFLDSLQ 121 AE ++F A DH+ +IRPA+ EGKI++ DR+ DS YAYQG + ++ +Q Sbjct: 58 --LAELMLFTADHADHISTLIRPAIEEGKIVISDRYSDSRYAYQGVTLKERMEEPMEWIQ 115 Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I ++PD T++ D+ + ++R R FE+ D++ + R+ +L + Sbjct: 116 MIHRGWTIIPDLTLLFDIDPAVAVQRCGKRGEQT------KFEKTDLL--KGVRENYLKL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A +P+R ++D+ + + ++L + +++ Sbjct: 168 AEKEPERFVVIDTDRDLKEIEKDVLQAITSIIE 200 >gi|87125181|ref|ZP_01081027.1| Thymidylate kinase [Synechococcus sp. RS9917] gi|86166950|gb|EAQ68211.1| Thymidylate kinase [Synechococcus sp. RS9917] Length = 217 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 62/224 (27%), Positives = 92/224 (41%), Gaps = 15/224 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLL 55 + G + EGI+G GKTT + L +L + TREPGGT +A R +LL Sbjct: 3 IQRGRLLVLEGIDGCGKTTQMEHLATWLPVSGLMPSTARLIQTREPGGTALGQALRGLLL 62 Query: 56 SCGVDEFGAEAE-AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +++AA R HV VIRPAL G +L DRF S+ AYQG Sbjct: 63 HPPEAAAPEAVAELLLYAADRAQHVAQVIRPALERGDWVLSDRFTGSTMAYQGFGRQLDQ 122 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L I+ + PD T+ L LPV + ++R R D E + ++ Sbjct: 123 ALIRQLALIATGGLTPDLTVWLSLPVAVSVER-------RGGRRADRIEASGLDFLQRVA 175 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 F A Q V + V + ++ + ++ P Sbjct: 176 DGFAAQAAEQG--WLEVRADRPLAQVREALEALLSQQARRWARP 217 >gi|72080598|ref|YP_287656.1| thymidylate kinase [Mycoplasma hyopneumoniae 7448] Length = 213 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K D+ T EPGG EA R LLS + Sbjct: 3 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLS-KNN 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 62 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI LD+ + +R+ + D E K V +E+ + + Sbjct: 122 NSLISENTFPDLTIFLDIKISKSFERM----GIFRDHNRDRLENKGVEFYERVINGYEFL 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 + + +D ++ V I++ Sbjct: 178 TKKNKN-FFKIDGNGTYDEVLDLIID 202 >gi|294496621|ref|YP_003543114.1| thymidylate kinase [Methanohalophilus mahii DSM 5219] gi|292667620|gb|ADE37469.1| thymidylate kinase [Methanohalophilus mahii DSM 5219] Length = 199 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 16/211 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G ++ EGI+G+GKTT + L++ D+ TREP +A + + Sbjct: 2 KGKLVTLEGIDGSGKTTIMEYLEQ--NPIYSDIIFTREPTKDWIGQAVIRAI----HSDV 55 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQ 121 AE ++F A +H+ N I PA+ G++++ DR+ DS AYQ + ++ ++ Sbjct: 56 DPLAELLLFTADHAEHIRNTIIPAVQAGRVIISDRYSDSRIAYQSSTLKDRFDDPVEWIK 115 Query: 122 EISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V+PD T++LD+ +I + R +R + FE+ V + R +FL + Sbjct: 116 QLHRGWSVVPDLTLLLDIDPEIAVSRCNSRDAQT------KFEK--VDFLSQVRNVFLQL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A P R I+D++ + V + + L Sbjct: 168 AEENPQRFVIIDASQGLEKVKKEVDKAINGL 198 >gi|291320671|ref|YP_003515936.1| thymidylate kinase [Mycoplasma agalactiae] gi|290753007|emb|CBH40983.1| Thymidylate kinase [Mycoplasma agalactiae] Length = 215 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 10/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FI+FEG++G+GKTT + L L K VTREPGG +E R ++L Sbjct: 1 MFITFEGLDGSGKTTILQKLVEKLLEKKPALSFIVTREPGGKNVRESEKIRELILD-KES 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +EA+++ A+R H+E VI AL E K++LCDR++DS YAYQG F L Sbjct: 60 RLSPISEALLYTASRRIHIEKVILSALKENKLVLCDRYIDSFYAYQGIVRGLGLSFAKQL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E+ ++ +PD TI +D+ + R R R + D + + + H+K + ++ Sbjct: 120 TEMVIESTIPDITIFIDITAEQSEYR---RNVSRLIS--DRLDSESLEFHKKVFDAYKEV 174 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P R IV+ S + I+ +++ Sbjct: 175 INLDPKRFIIVNGLQSIPEILDEIVEKLFQ 204 >gi|77414833|ref|ZP_00790949.1| thymidylate kinase [Streptococcus agalactiae 515] gi|77159110|gb|EAO70305.1| thymidylate kinase [Streptococcus agalactiae 515] Length = 163 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 59/149 (39%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + E +++ AAR H+ + PAL EGKI+L DRF+DSS AYQG + Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEGKIVLMDRFIDSSVAYQGSGRGLDKSHIKW 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQ 148 L + + PD + D+P ++GL+R+Q Sbjct: 121 LNDYATDSHKPDLXLYFDVPSEVGLERIQ 149 >gi|166221829|sp|Q4A8A6|KTHY_MYCH7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|144575350|gb|AAZ53633.2| thymidylate kinase [Mycoplasma hyopneumoniae 7448] Length = 211 Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K D+ T EPGG EA R LLS + Sbjct: 1 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKDIVTTFEPGGKNLKEALLIREFLLS-KNN 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 60 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI LD+ + +R+ + D E K V +E+ + + Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERM----GIFRDHNRDRLENKGVEFYERVINGYEFL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 + + +D ++ V I++ Sbjct: 176 TKKNKN-FFKIDGNGTYDEVLDLIID 200 >gi|301167072|emb|CBW26651.1| putative thymidylate kinase (dTMP kinase) [Bacteriovorax marinus SJ] Length = 229 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 7/212 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+SFEGIEGAGK+T I K +L+ + + V + REPGGTP E R +L+ + Sbjct: 21 FFLSFEGIEGAGKSTQIISAKEYLESQGFRVLILREPGGTPFGEKLRQAILNSKSE-LEP 79 Query: 65 EAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +EA +FA++R + V L G +++ DR+LDSS AYQG + ++ + Sbjct: 80 ISEAYLFASSRAQLLTEVTLKELNTPGTVVIYDRYLDSSIAYQGIARGLGVDNILNIHNV 139 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++P T L + + R + R + + DYFE + ++ Q + Sbjct: 140 FPLNLIPHKTFYLKISTETSFGRQRVRNAPK-----DYFESRGKDFYDNLVQGYELSCEL 194 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P+R ++D S V +I + L+ KR Sbjct: 195 FPERISVIDGNRSLDDVFADIKEELNHLIFKR 226 >gi|312601234|gb|ADQ90489.1| Thymidylate kinase [Mycoplasma hyopneumoniae 168] Length = 211 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 10/206 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEA--ARHVLLSCGVD 60 +FISFEGI+ +GK+T + L ++L+ K ++ T EPGG EA R LLS + Sbjct: 1 MFISFEGIDASGKSTVMDLFAKYLKIKFPEKEIVTTFEPGGKNLKEALLIREFLLS-KNN 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++FA AR H+E +I PAL GKI+LCDR++DSS AYQG + + SL Sbjct: 60 QISPYVEMLLFATARRIHLERLIWPALKAGKIVLCDRYIDSSIAYQGFGNGLDIDLVTSL 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI LD+ + +R+ + D E K V +E+ + + Sbjct: 120 NSLISENTFPDLTIFLDIKISKSFERM----GIFRDHNRDRLENKGVEFYERVINGYEFL 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN 206 + + +D ++ V I++ Sbjct: 176 TKKNKN-FFKIDGNGTYDEVLDLIID 200 >gi|94266074|ref|ZP_01289792.1| Thymidylate kinase [delta proteobacterium MLMS-1] gi|94267013|ref|ZP_01290658.1| Thymidylate kinase [delta proteobacterium MLMS-1] gi|93452287|gb|EAT02928.1| Thymidylate kinase [delta proteobacterium MLMS-1] gi|93453357|gb|EAT03788.1| Thymidylate kinase [delta proteobacterium MLMS-1] Length = 218 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 14/213 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+ I+ EGI+G GK+T + LL R L+ +V T EP P R + + + Sbjct: 13 AGILIALEGIDGTGKSTQLKLLARRLRELGLEVVTTFEPTDGPHGRYLRQMFKNRA--QL 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +F A R DHVE VI PAL GK++L DR+ S+ AYQG + ++ Sbjct: 71 PPKEELRLFIADRHDHVEQVIAPALAAGKVVLTDRYYFSTAAYQGAAGHDPAAIIAENEQ 130 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD ++L+ P +G+ RV+ L+ FE++D + IF +A Sbjct: 131 FA---PRPDLVLLLEAPPAVGIARVRE----LRGESLNDFEQED--YLRRVTAIFASLAD 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R +D+ V + V +L++++ Sbjct: 182 S---RIRRIDATGRLDQVQQRLWPPVAQLLRQQ 211 >gi|119719934|ref|YP_920429.1| dTMP kinase [Thermofilum pendens Hrk 5] gi|119525054|gb|ABL78426.1| thymidylate kinase [Thermofilum pendens Hrk 5] Length = 254 Score = 194 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 19/221 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL+++ EGI+G+GKTT ++L L + + V + REP E + Sbjct: 53 GGLYVALEGIDGSGKTTQAAMLYEKLSAEGFQVVIVREPWVPAIKEFLYK-------HDL 105 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EAE +FAA R+ V+ P+L GKI++ DR + +S AYQ + F+ ++ + Sbjct: 106 DVEAEVYLFAADRIILQREVVLPSLRAGKIVVSDRSVFASLAYQSS-RGADQDFILAVNK 164 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD ++LDLPV+ +KR+ +R + FE D EK R +L +A Sbjct: 165 SVRF---PDVVVLLDLPVEEAMKRLSSRVAQT------RFE--DPGYMEKVRAKYLQLAE 213 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 P++ +VD++ + V IL + +V+ R+ ++ Sbjct: 214 EYPEKFIVVDASKPPEEVNREILREIVSIVRSRIRSEPGER 254 >gi|291288268|ref|YP_003505084.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809] gi|290885428|gb|ADD69128.1| thymidylate kinase [Denitrovibrio acetiphilus DSM 12809] Length = 211 Score = 194 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 4/209 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ +GI+G GK+T + + L + +V +TREPGGT A R +L+S D Sbjct: 6 LFIAVDGIDGCGKSTLSAGMAEKLDKLGRNVKLTREPGGTDAGLLIRQLLVSKKYD-LEP 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++E +++ A RL+H ++ P L +G ++ DRF+ S+YAYQ LD L S Sbjct: 65 QSELMLYCADRLEHQTKLVIPVLEKGFDVISDRFVSSTYAYQIFGRGLDKDLLDYLTGYS 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIARN 183 ++ MPD T I+++ + L+R +R + + FE + +K F A Sbjct: 125 IRR-MPDITFIIEIDPETALERAMSRLVRDKKVDEEGKFEALGLEFFKKVADGFDWYAGK 183 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++ A S Q+V ++++I+ V Sbjct: 184 FENVWR-INGAQSPQAVLNDVMHILDNFV 211 >gi|193216551|ref|YP_001999793.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1] gi|193001874|gb|ACF07089.1| thymidylate kinase [Mycoplasma arthritidis 158L3-1] Length = 213 Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 11/214 (5%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEA--ARHVLL 55 MN FI+ EG++G+GKTT I +LK +L D TREPG +AEA R ++L Sbjct: 1 MNKKAKFITIEGMDGSGKTTIIEMLKDYLFNIGKIDDFVFTREPGSAYSAEAENIRKIVL 60 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G +F +A++F +R ++E I PAL K ++ DRF SS+ YQG Sbjct: 61 DSGN-KFSPMVDALLFVTSRRINLEKAIWPALKAKKNVISDRFWHSSFVYQGILGKVGLD 119 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + E+ +++ PD I DL ++ ++R+ LRE D E V ++ R+ Sbjct: 120 KVRQINEMVIEDTQPDFVIFFDLQPEVSVERLTK---LREK--TDRLETDQVEYYQALRK 174 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + ++ + P + I+D++ S V +L I+ Sbjct: 175 AYFEVINSDPTKFRIIDASQSIVKVFEQLLIILK 208 >gi|304321770|ref|YP_003855413.1| thymidylate kinase [Parvularcula bermudensis HTCC2503] gi|303300672|gb|ADM10271.1| thymidylate kinase [Parvularcula bermudensis HTCC2503] Length = 209 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 108/215 (50%), Gaps = 33/215 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+FEG EGAGK+T I+LL L+ V +TREPGGTP EA R VLL+ + Sbjct: 5 GRFITFEGPEGAGKSTQIALLAERLRSAGEAVTMTREPGGTPGGEALRDVLLNPAAT-WS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++ AAR H++ +I PAL G+ +LCDRF S+ AYQG D L +L+ Sbjct: 64 PLAEALLMNAARDAHMQTLILPALQRGETVLCDRFAASTLAYQG--DGVAPETLAALEAA 121 Query: 124 SVQEVMPDCTIILDL-----------PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 V + PV GL R + R + D FE + + HE Sbjct: 122 VV------------VRRPDLVLLLDLPVAEGLARAKARSTA------DRFEGRRLDYHEG 163 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 R FL++A P+ H +D+A V+ IL + Sbjct: 164 VRARFLELAAKDPN-MHCIDAAQPQDDVSAAILEV 197 >gi|119872697|ref|YP_930704.1| dTMP kinase [Pyrobaculum islandicum DSM 4184] gi|119674105|gb|ABL88361.1| thymidylate kinase [Pyrobaculum islandicum DSM 4184] Length = 205 Score = 193 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 61/210 (29%), Positives = 108/210 (51%), Gaps = 20/210 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EGI+G+GK+T I L L + V+VTREP G P + L G Sbjct: 3 FVAIEGIDGSGKSTVILQLAEMLPK----VYVTREPSGGPIGRLIKEWALKGGT--IDPH 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A++FAA R++H + I P + EG I++ +R+++SS AYQG + +D ++ I+ Sbjct: 57 VDALLFAADRIEHYKREIEPKVREGYIVISERYIESSIAYQGAAG----VPIDFIKIINS 112 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 D TIILD+ +I + R++ R + + ++ R+I+L AR + Sbjct: 113 AVPKADITIILDVDPEIAIARIKQRGDSEKY--------EHSAFLKRVREIYLQRAREEG 164 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +VD++ VA ++ I+ +++ R Sbjct: 165 --YPVVDASRPPNVVAKDVAEIITQMLNYR 192 >gi|171184628|ref|YP_001793547.1| dTMP kinase [Thermoproteus neutrophilus V24Sta] gi|170933840|gb|ACB39101.1| dTMP kinase [Thermoproteus neutrophilus V24Sta] Length = 204 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 20/210 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EGI+G+GK+T IS L L + V+ TREP G P + L G Sbjct: 3 FVAIEGIDGSGKSTVISRLAEILPK----VYTTREPSGGPIGRLIKEWALRGGT--VDPH 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A++FAA R++H + P + EG I++ +R+++SS AYQG F+ S+ + Sbjct: 57 VDALLFAADRIEHYRREVEPKVREGYIVISERYVESSIAYQGAA-GVPLEFIKSINSLV- 114 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T+ILD+ ++ + RV+ R L+ +E+ + + R+I+L AR + Sbjct: 115 --PRPDVTVILDVEPEVAISRVRQR------GALEKYEQ--MAFLRRVREIYLARAREEG 164 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +VD+A + VA + IV + + R Sbjct: 165 --YPVVDAARPPEVVAREVAEIVKKALDYR 192 >gi|327398213|ref|YP_004339082.1| Thymidylate kinase [Hippea maritima DSM 10411] gi|327180842|gb|AEA33023.1| Thymidylate kinase [Hippea maritima DSM 10411] Length = 201 Score = 192 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 NS +I+FEGI+ +GKTT L FL+++ ++V T+EPGGT R VLL+ + Sbjct: 8 NSCRYIAFEGIDASGKTTQAKLFVDFLKKEGFNVFFTKEPGGT--IPFFREVLLN---KQ 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A+ +F A R + I+ L G +++ DR S+ AYQG D FL Sbjct: 63 LVKQAQLFLFLADRAQTILT-IKKKLDAGFVVVSDRSFYSTLAYQGFGDDMDIGFLKQAN 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 EI+ + PD +D+ + + R+ + D E K V E+ RQ ++ ++ Sbjct: 122 EIATGGLKPDLVFCIDITTNEMMNRLNKK---------DAIESKPVGFFERVRQGYIKLS 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207 ++ D ++V+ S V + ++ I Sbjct: 173 KDY-DNFYLVNGLRSIDDVFSEVVEI 197 >gi|145590421|ref|YP_001152423.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514] gi|145282189|gb|ABP49771.1| dTMP kinase [Pyrobaculum arsenaticum DSM 13514] Length = 196 Score = 192 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 112/212 (52%), Gaps = 20/212 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ EGI+G+GK+T ISLL + L R V+VTREP +P + L G Sbjct: 3 FVVIEGIDGSGKSTVISLLSKLLPR----VYVTREPSASPIGRLIKEWALREGTA--DPR 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A++FAA R++H + I P L EG I++C+R+++SS AYQG + ++ ++ I+ Sbjct: 57 VDALLFAADRIEHYKREIEPRLREGYIVICERYVESSIAYQGAAG----VPIEYIKFINS 112 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD T+ILD+ ++ + RV+ R + + + + ++ R I+L A + Sbjct: 113 AVPKPDITVILDVDPEVAIARVKQRGTAEKY--------EQLSFLKRVRGIYLSRAAEEG 164 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 ++D++ + VA + ++ + + R S Sbjct: 165 --YPVLDASRPAEEVAKEVARLIEKRLGSRES 194 >gi|229100819|ref|ZP_04231634.1| Thymidylate kinase [Bacillus cereus Rock3-28] gi|228682586|gb|EEL36648.1| Thymidylate kinase [Bacillus cereus Rock3-28] Length = 174 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 50/175 (28%), Positives = 90/175 (51%), Gaps = 4/175 (2%) Query: 38 TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97 TREPGG +E R +L A EA+++AAAR H+ + PAL E ++LCDR Sbjct: 3 TREPGGIAISEDIRTILHKQEYTMMEARTEALLYAAARRQHLVEKVMPALNENYLVLCDR 62 Query: 98 FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 F+DSS AYQG + + + ++ MP TI LD+ ++GL R++ Sbjct: 63 FIDSSLAYQGYARGLGMDKVFEINRFATEDCMPSVTIYLDIEPEVGLARIEK----DAGR 118 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ + +D+ H++ R+ +L + DR +V++ + + ++ I+ + + Sbjct: 119 EVNRLDMEDISFHKRVREGYLQVVERFSDRIVLVNADQPMEKLIEEVVQIIEDKL 173 >gi|255348545|ref|ZP_05380552.1| thymidylate kinase [Chlamydia trachomatis 70] gi|255503085|ref|ZP_05381475.1| thymidylate kinase [Chlamydia trachomatis 70s] gi|255506763|ref|ZP_05382402.1| thymidylate kinase [Chlamydia trachomatis D(s)2923] gi|289525226|emb|CBJ14702.1| thymidylate kinase [Chlamydia trachomatis Sweden2] gi|296434774|gb|ADH16952.1| thymidylate kinase [Chlamydia trachomatis E/150] gi|296438494|gb|ADH20647.1| thymidylate kinase [Chlamydia trachomatis E/11023] Length = 203 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 9/198 (4%) Query: 17 KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARL 76 KT I L + L + ++ TREPGG ++ R +LL + AE ++F AAR Sbjct: 13 KTQFIQALSKRLIEEGREIVTTREPGGCSLGDSVRGLLLDP-EQKISPYAELLLFLAARA 71 Query: 77 DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE--VMPDCTI 134 H++ I PAL GK ++ DRF DS+ YQG F+ +L V + +PD T Sbjct: 72 QHIQEKIIPALKSGKTVISDRFHDSTIVYQGIAGGLGESFVTNLCYHVVGDKPFLPDITF 131 Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 +LD+P GL R + LD FE+K + H+ R+ FL +A PDR ++D+ Sbjct: 132 LLDIPAREGLLRKARQKH------LDKFEQKPQIFHQSVREGFLALAEKAPDRYKVLDAL 185 Query: 195 HSFQSVATNILNIVWELV 212 ++ L + L+ Sbjct: 186 LPTEASVDQALLQIRALI 203 >gi|296535552|ref|ZP_06897734.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957] gi|296264138|gb|EFH10581.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957] Length = 177 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 6/179 (3%) Query: 34 DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93 V TREPGG P AEA R +LLS GV + AEA++ AAR +H IRPAL G + Sbjct: 1 PVLRTREPGGAPGAEALRGLLLSGGV-AWDPVAEAMLMFAARREHWVKTIRPALAAGIWV 59 Query: 94 LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 +CDRF DS+ AYQ L+++++ EV PD T++LDLP + G+ R +R Sbjct: 60 VCDRFADSTLAYQCHGHGLDAAIWRQLKQVALGEVAPDATLVLDLPPERGMARALSR--- 116 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A D E H + F IA +P RC ++D+A SV + + + + Sbjct: 117 --GAAPDRIESLGSAFHARVNAAFRSIAEAEPQRCALLDAALPPDSVLDQAVAALRQRL 173 >gi|88608604|ref|YP_506430.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama] gi|123491811|sp|Q2GDL6|KTHY_NEOSM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|88600773|gb|ABD46241.1| thymidylate kinase [Neorickettsia sennetsu str. Miyayama] Length = 199 Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 101/209 (48%), Gaps = 20/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EGI+G+GK+T + LL +FL + Y +TREPGGT AE+ R ++L D Sbjct: 1 MFIVLEGIDGSGKSTQVKLLSKFLAKDGYPCVLTREPGGTSFAESLRSMILH---DPIDP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++ +AR+DH VI PAL EGK+++CDRF+ S+ AYQG D + L +S Sbjct: 58 MARLLLIVSARVDHYNKVILPALKEGKVVVCDRFIYSTLAYQGYGDKIDLQTILDLHRLS 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V PD T++L S + D FER + IAR Sbjct: 118 GCLVEPDLTLLL-------------LGSGHKKLGRDNFERMPREYLSNVCMGYEKIARMY 164 Query: 185 PDRCHIVDS---AHSFQSVATNILNIVWE 210 P+ H++ + + + + + E Sbjct: 165 PN-IHVIKCMGVGRTSEEIVKIVQGKISE 192 >gi|322435114|ref|YP_004217326.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9] gi|321162841|gb|ADW68546.1| thymidylate kinase [Acidobacterium sp. MP5ACTX9] Length = 220 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 11/222 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI+FEG++G+GKTT + LL L + V R+PGGT + R VLL + Sbjct: 1 MGRGFFITFEGLDGSGKTTQLKLLAAALTAEGRTVVSLRQPGGTALGDRIRGVLLDSRSE 60 Query: 61 E----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 AE + A R + VIRPAL G ++LCDR+ DSS AYQG Sbjct: 61 AALGTIAPLAELALMFADRAQAIAEVIRPALGAGAVVLCDRYTDSSEAYQGAGRELGSER 120 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL---RESACLDYFERKDVMIHEKR 173 + +L E + + P+ T++L ++ L+R + R + + FER+ + + Sbjct: 121 VLALHETVCEGLWPELTVLLLPSLEASLRRARRRNTRHVKEHGTDENRFEREGDAFYGRI 180 Query: 174 RQIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWELVQ 213 + + IA +P R V D+ +++A + IV ++ Sbjct: 181 HEAYERIAEREPGRVVAVRDDA--PVEAIAGKVWEIVAGRLR 220 >gi|212696419|ref|ZP_03304547.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM 7454] gi|212676591|gb|EEB36198.1| hypothetical protein ANHYDRO_00957 [Anaerococcus hydrogenalis DSM 7454] Length = 167 Score = 191 bits (487), Expect = 4e-47, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 6/170 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GL I FEG +G+GKTT + + L + YD++ REPGGT +E R ++L + Sbjct: 2 NGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIKM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A EA+++AA+R +E +RP L +G I+LCDRF+ SS YQG + + + Sbjct: 62 SARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQGIGRGLGIDEVKKIND 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 ++ E+ D T+ L++ + R + + D E +D H+K Sbjct: 122 FAIGEIKADLTLFLNIDYKTAIDRKRKNF------VSDRLENEDDSFHKK 165 >gi|328951753|ref|YP_004369087.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109] gi|328452077|gb|AEB07906.1| Thymidylate kinase [Desulfobacca acetoxidans DSM 11109] Length = 217 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 104/222 (46%), Gaps = 16/222 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEG++G GKTT LL + L R V +TREP P + R +LL Sbjct: 9 GGRLIAFEGVDGVGKTTQAHLLAQALSRLGLSVILTREPTTGPWGQQIRQILLHGR-QGL 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +AE +F A R +HV VIRPAL+ GKI++ DR+ SS AYQG + E Sbjct: 68 TPKAELELFIADRREHVAQVIRPALVAGKIVITDRYYFSSMAYQGA-LGLDPDRIQKCHE 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD IIL LP+ R+Q R + S+ +++ K QIF + Sbjct: 127 --TFAPRPDLAIILTLPLSEITARLQQRSGQKRSSF------ENLAYLTKVAQIFSRLRA 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ---KRVSPLSS 221 +D + +V IL +V L++ K+ +P+S Sbjct: 179 PYLQH---LDGQGTIAAVHARILTLVQPLLKPSRKQSAPVSG 217 >gi|126465530|ref|YP_001040639.1| thymidylate kinase [Staphylothermus marinus F1] gi|166223119|sp|A3DM71|KTHY_STAMF RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|126014353|gb|ABN69731.1| thymidylate kinase [Staphylothermus marinus F1] Length = 199 Score = 191 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 19/212 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N+G F+ EGI+GAGKT+ L+ FL K ++VH T EP T EA L + Sbjct: 4 NNGFFLVLEGIDGAGKTSIAFKLRDFLVEKGFNVHYTYEPYNTLYVEA----LKKKYNEY 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +A+ +AA RL H+ I P L G I++CDR+ SS AYQ Q ++ + Sbjct: 60 RDAYLDALTYAADRLVHIRTEILPYLRRGYIVICDRYYYSSAAYQSA----QGAPIEWVL 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDI 180 EI+ + PD TI LD+ IG+KR + + F E + + + R+ +L + Sbjct: 116 EINKYALKPDLTIYLDVDPAIGVKRRKGLNT--------RFPEYEKLDFLYRVRENYLWL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +VD+ F V ++ IV E + Sbjct: 168 V--DKGYMVLVDANREFDKVYRDVEKIVLEHL 197 >gi|206896205|ref|YP_002246823.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265] gi|238057696|sp|B5Y7S6|KTHY_COPPD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|206738822|gb|ACI17900.1| thymidylate kinase [Coprothermobacter proteolyticus DSM 5265] Length = 193 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 14/205 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EGI+G GK+T SLL + +K V T EPG R +++ + Sbjct: 1 MFIVVEGIDGCGKSTVASLLAAEIGKK-RPVFHTFEPGHVRDG-LYRELIM---ENVDNP 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A +F R +HV+ +I+PAL +G+ ++C+R+ DS+ AYQG ++ + E + Sbjct: 56 FVVAALFTIDRAEHVKKMIKPALAKGEWVVCERYADSTLAYQGYGMGLDKELINRMNEEA 115 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD LD+ + L R+QN+ D E + + ++ R+ + +IAR + Sbjct: 116 IDGLWPDKIFYLDIEPHLALARLQNKEK-------DALEGQGLEFLQRVREGYEEIARTR 168 Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209 D+ + + IL V Sbjct: 169 GYIYM--DATLPPEIIVKRILEEVK 191 >gi|325967673|ref|YP_004243865.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28] gi|323706876|gb|ADY00363.1| thymidylate kinase [Vulcanisaeta moutnovskia 768-28] Length = 199 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 104/210 (49%), Gaps = 13/210 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++ EGI+G GK+T IS+L++ L+ Y V+ T EP +P R LL + Sbjct: 1 MFVAVEGIDGVGKSTVISMLRKKLESNGYRVYTTAEPSQSPIGRLIRDWLLKPSSNAAHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++F A R+ H ++P L G +++ +R+++S+ AYQG +L L Sbjct: 61 SIFALLFTADRVQHYYGEVKPKLDSGYLVITERYMESTLAYQGAM-GLPQEWLMELHRFV 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD TIILD P++ + R+ NR L+ FE + K R+ L A Sbjct: 120 ---PRPDLTIILDAPIETVIGRLSNR------RELEVFE-VNKEFLSKVREFLLRRAST- 168 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + ++++ +S+ +I ++ + +++ Sbjct: 169 -NNYPVINADRDLESIVNDIYELIIDALRR 197 >gi|297569137|ref|YP_003690481.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2] gi|296925052|gb|ADH85862.1| thymidylate kinase [Desulfurivibrio alkaliphilus AHT2] Length = 222 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 14/211 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+ I+ EGI+G GK+T LL + L++ +V VTREP P R + L+ Sbjct: 12 RAGVLIALEGIDGTGKSTQQQLLAQRLRQLGLEVVVTREPTDGPYGRRLRELFLNRA--S 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +F A R +HV +I PAL G++++ DR+ S+ AYQG L + Sbjct: 70 LSPEEELQLFLADRREHVAKLIEPALKAGRVVITDRYYYSTAAYQGASGHDPAAILAINE 129 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD ++L+ P +G++RVQ L+ FE++D + IF + Sbjct: 130 SFA---PRPDLVLLLEAPPAVGVRRVQE----GRGESLNDFEQED--YLRRVAGIFAGFS 180 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 P V++ + + V I V L+ Sbjct: 181 A--PG-LVRVNATGAIEQVQVEIWQAVEALL 208 >gi|47458911|ref|YP_015773.1| thymidylate kinase [Mycoplasma mobile 163K] gi|59798285|sp|Q6KIL4|KTHY_MYCMO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|47458239|gb|AAT27562.1| thymidylate kinase [Mycoplasma mobile 163K] Length = 209 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 13/216 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPA--AEAARHVLLSCGVD 60 +FISFEGI+GAGK+T I LKR L + + TREPGG AE R +LL + Sbjct: 1 MFISFEGIDGAGKSTIIKKLKRKLPKLYPDKKFVFTREPGGKKLKEAEKIRKILLDKKTN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +++AA+R H++++I PAL +G I++ DR++DSSY YQG + + Sbjct: 61 -IDPMTETLLYAASRRVHLDSLIWPALKKGHIVISDRYVDSSYVYQGIARGLGVKVVKEI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +I+ MPD T L + + + R R D E + + + I Sbjct: 120 NDIATSNFMPDYTFFLSISEEESIIRRHKR------GKPDRLEMSSKDFFSRAYEGYFKI 173 Query: 181 ARN--QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + DR +V++ + ++ NILN ++++K Sbjct: 174 INSPTMADRFILVNAEENVGTILKNILNEFDKILKK 209 >gi|18312312|ref|NP_558979.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2] gi|23821790|sp|Q8ZY35|KTHY_PYRAE RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|18159759|gb|AAL63161.1| thymidylate kinase (tmk) [Pyrobaculum aerophilum str. IM2] Length = 192 Score = 190 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 20/208 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EGI+G+GK+T ISLL++ L R V+ TREP P + L G Sbjct: 3 FVAIEGIDGSGKSTVISLLEKKLPR----VYATREPSSGPIGRLIKEWALKGG--SVDPH 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A++FAA R++H + I P + EG I++ +R+++SS AYQG F+ + + Sbjct: 57 VDALLFAADRIEHYKREIEPRVREGYIVISERYIESSIAYQGAA-GVSREFVKYINSLV- 114 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD TIILD+ I R++ R + + + K R+I+L A + Sbjct: 115 --PKPDLTIILDVDPSIAEARIRQRGGAEKY--------EYLSFLRKVREIYLARAAEEG 164 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++D++ + VA ++ ++ +V+ Sbjct: 165 --YPVIDASRRPEEVAADVAELIKRVVR 190 >gi|108804784|ref|YP_644721.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941] gi|108766027|gb|ABG04909.1| thymidylate kinase [Rubrobacter xylanophilus DSM 9941] Length = 203 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 67/204 (32%), Positives = 100/204 (49%), Gaps = 8/204 (3%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 + EG++ GK+T LL+ L + V TREPGGTPAAE R VLL E Sbjct: 2 TVEGLDFCGKSTLARLLEGEL--GGWRVRFTREPGGTPAAERIRGVLLDPRG-AMDPWTE 58 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A ++AAAR DHV +I P+L G+ ++C+RFLDSS AYQG + L +V + Sbjct: 59 AYLYAAARADHVRRLILPSLERGETVVCERFLDSSLAYQGRGRGLGMEAVRRLNAWAVGD 118 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 + PD T L + + + R + A D ER + + F ++AR +P R Sbjct: 119 LAPDATFYLRVGAE-----ERARRARASGAPPDRIERSGGAFMRRVEEGFEELARREPGR 173 Query: 188 CHIVDSAHSFQSVATNILNIVWEL 211 ++D + +A + + L Sbjct: 174 VRVLDGTLPPRELAALVAGELRAL 197 >gi|115376927|ref|ZP_01464147.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|310820577|ref|YP_003952935.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|115366038|gb|EAU65053.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|309393649|gb|ADO71108.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] Length = 564 Score = 189 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 9/218 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 +FI FEGI+G+GKTT +LL L+R+ Y V RE G +P A R + E Sbjct: 1 MFIDFEGIDGSGKTTLSNLLAARLRRQGYKVAHAREGGELQSPIARRVRDFTRDSKLLEM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA E + A +E VI PAL G++ + DR+L S A G L E Sbjct: 61 GARTEFFLNLARDAQQLEEVISPALCRGEVCISDRYLYSQLALSGGGRGLPLEDLAPACE 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVM---IHEKRRQIFL 178 ++ + + PD I++D+ D L R++ R ++E D RK + + + R+ FL Sbjct: 121 LASKGIWPDLVILVDVEPD--LARLRKRLGKVKEGRNSDGDSRKGLAGAGLSVRVREAFL 178 Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIVWELVQKR 215 ++AR P R ++ ++ ++ I++ V +++R Sbjct: 179 EMARKDPARWLVIENNDQPLWALEQRIVDAVLARLERR 216 >gi|51246661|ref|YP_066545.1| thymidylate kinase [Desulfotalea psychrophila LSv54] gi|59798232|sp|Q6AJE2|KTHY_DESPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|50877698|emb|CAG37538.1| related to thymidylate kinase [Desulfotalea psychrophila LSv54] Length = 202 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 104/212 (49%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G I FEG +GAGK+T I +L +L+ K DV + EP P + R + ++ Sbjct: 4 NPGKLIIFEGTDGAGKSTQIKMLANYLRSKGLDVIASFEPTNGPYGQKIRQLYTDR--NK 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +F A R +HV +I PA+ GKI+LCDR+ S+ AYQG ++ + Sbjct: 62 VTRNEELELFLADRREHVNKLINPAISAGKIVLCDRYYLSTAAYQGA----LGFDVEEIL 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD ++L +PV+ G +R+ S R D+ + + EK IF ++ Sbjct: 118 QRNSFAPTPDLALLLQIPVEDGRRRIT---SSRGEETNDF---EKAEMLEKVSTIFNSLS 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P +++ S +V +I+ V +L++ Sbjct: 172 --FP-YIRHINACQSIDNVQRDIIMQVKQLLK 200 >gi|254796905|ref|YP_003081742.1| thymidylate kinase [Neorickettsia risticii str. Illinois] gi|254590141|gb|ACT69503.1| thymidylate kinase [Neorickettsia risticii str. Illinois] Length = 199 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 102/209 (48%), Gaps = 20/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GK+T + LL +FL + Y +TREPGGTP AE+ R ++L D Sbjct: 1 MFIVFEGIDGSGKSTQVKLLSKFLAKNGYPCVLTREPGGTPFAESLRSMILH---DSIDP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++ AR+DH VI PAL EGKI++CDRF+ S+ AYQG + + L ++S Sbjct: 58 MARLLLIVGARVDHYNKVILPALKEGKIVVCDRFIYSTLAYQGYGEKIDLQTILDLHKLS 117 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V PD T++L S R+ D FER + IA Sbjct: 118 GCLVEPDLTLLL-------------SGSGRKKLGRDNFERMPREYLSNVCMGYEKIAHTY 164 Query: 185 PDRCHIVD---SAHSFQSVATNILNIVWE 210 + H++ + + + + + E Sbjct: 165 SN-IHVIKRMGVGRTSEEIVKIVQGKISE 192 >gi|307595585|ref|YP_003901902.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429] gi|307550786|gb|ADN50851.1| thymidylate kinase [Vulcanisaeta distributa DSM 14429] Length = 199 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 13/210 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++ EGI+G GK+T IS+L+R L+ Y V+ T EP +P R LL G + Sbjct: 1 MFVAIEGIDGVGKSTVISMLRRKLEESGYRVYTTAEPSQSPIGRLIRDWLLKPGSNVAHP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++F A R+ H ++P L G +++ +R+++S+ AYQG Q +L L Sbjct: 61 SIFALLFTADRVQHYYGEVKPMLDSGYLVITERYMESTLAYQGAM-GLQQEWLMELHRFV 119 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD TIILD PVDI + R+++R L+ FE + K R+I L A Sbjct: 120 ---PKPDLTIILDAPVDIVISRLRSR------RELEVFE-VNREFLIKVREILLRRALM- 168 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +V++ +V ++ ++ +++ Sbjct: 169 -NNYPVVNANRDLGAVVDDVYGLIINALRR 197 >gi|300710360|ref|YP_003736174.1| thymidylate kinase [Halalkalicoccus jeotgali B3] gi|299124043|gb|ADJ14382.1| thymidylate kinase [Halalkalicoccus jeotgali B3] Length = 192 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 24/212 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GK+T + LQ D TREP + EA + D Sbjct: 1 MLLTLEGLDGSGKST----VHEALQDTYPDAVFTREPTDSWYGEAVARSISDAEAD---P 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS----QHLFLDSL 120 AE ++ A DH+ V+RPAL GK+++ DR+ DS YAYQG + ++ + Sbjct: 54 LAELFLYTADHADHLSRVVRPALDAGKLVISDRYSDSRYAYQGAALAGAIDRPMEYVRGV 113 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD TI LD+ + G +R S + FE+ + R + + Sbjct: 114 HSPFTRS--PDLTIYLDVDPETGARR---------SGASNKFEQ--SEYLGRVRANYERL 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P R +D+ S ++V + ++ E++ Sbjct: 161 IDAEPGRFVRIDATRSPETVLDRVEGVLSEVL 192 >gi|11497681|ref|NP_068902.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304] gi|6016458|sp|O30175|KTHY_ARCFU RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|2650584|gb|AAB91163.1| thymidylate kinase (tmk) [Archaeoglobus fulgidus DSM 4304] Length = 196 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 19/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGKTT + + L+ K Y V V +EPG + + + + Sbjct: 1 MLIAVEGIDGAGKTTIAAYIAELLKEKGYKVKVLKEPGDSKFGKKIKS-----SEERLSP 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E +F R I PAL G ++ DR+ S+ AYQ R L + ++I+ Sbjct: 56 EEELELFLKDREIDARENILPALQSGYAVVMDRYYFSNIAYQSARGIDARLIREMNEKIA 115 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD TI+LD+ +I L+RV+ R L LDY K R+ FL+ A Sbjct: 116 ---PKPDLTILLDVEPEIALERVRKRGKLSPFEKLDYL--------RKVRKCFLENAD-- 162 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +VD++ + V + ++ + Sbjct: 163 -ETTVVVDASKPLEEVKEEVRKVIESFLN 190 >gi|126458752|ref|YP_001055030.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548] gi|171855086|sp|A3MSE7|KTHY_PYRCJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|126248473|gb|ABO07564.1| thymidylate kinase [Pyrobaculum calidifontis JCM 11548] Length = 193 Score = 187 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 22/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G+GKTT I+ + + L R V+VTREP G P + L G Sbjct: 1 MFIAVEGIDGSGKTTVIAEVAKALPR----VYVTREPSGGPIGRLLKEWALRGGTA--DP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +A++FAA R++H + I P L EG I++ +R+++SS AYQG ++ + + Sbjct: 55 HVDALLFAADRVEHYKREIEPKLREGYIVITERYVESSIAYQGAA-GVPIEYILYINSVV 113 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLDIARN 183 P TIILD+ +KR++ R + E+ +DV + R+I+L AR Sbjct: 114 ---PRPHLTIILDVDPAEAIKRIKAR---------ERLEKFEDVEFLRRVREIYLTRARA 161 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++D+ VA +++ I+ + Sbjct: 162 EG--YPVIDAGRPAGEVAKDVVAIIERAM 188 >gi|327399958|ref|YP_004340797.1| Thymidylate kinase [Archaeoglobus veneficus SNP6] gi|327315466|gb|AEA46082.1| Thymidylate kinase [Archaeoglobus veneficus SNP6] Length = 190 Score = 187 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 18/208 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G GKTT LK L+++ Y+V + +EP + + L A Sbjct: 1 MLIAIEGIDGVGKTTIAKFLKEELEKRGYEVVLLKEPTNSEWGRKIKASL----NKRLSA 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E +F R +VE+ I PAL +GKI++ DR+ S+ AYQ R +EI+ Sbjct: 57 EEELELFILDRKYNVEHNILPALKQGKIVIMDRYYYSNIAYQAARGLDAERIKRINEEIA 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD I+LD P +I L+R+ R + S +D +K R+IF + Sbjct: 117 ---PRPDIVILLDAPPEICLERIMERGEIPNSF-------EDPEYLKKVREIFKSL---- 162 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 D IVD++ S V ++L IV E + Sbjct: 163 KDNVVIVDASKSIDEVKKDVLRIVLERI 190 >gi|297526188|ref|YP_003668212.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710] gi|297255104|gb|ADI31313.1| thymidylate kinase [Staphylothermus hellenicus DSM 12710] Length = 199 Score = 187 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 103/211 (48%), Gaps = 17/211 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G F+ EGI+GAGKT+ L FL K + VH T EP T EA L + Sbjct: 4 SNGFFLVLEGIDGAGKTSIAFKLMDFLVEKGFSVHYTYEPYDTLYVEA----LKKKYDEY 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +A+ +AA RL H+ I P L G +++CDR+ SS AYQ Q ++ + Sbjct: 60 RDAYLDALTYAADRLVHIRTDILPYLRRGYVVICDRYYYSSAAYQSA----QGAPIEWVL 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 EI+ + PD TI LD+ IG+KR RE + E + + K R+ +L + Sbjct: 116 EINKYALKPDLTIYLDVDPHIGVKR-------REGLNTRFPEYEKLDFLYKVRENYLWLV 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +VD+ F V ++ IV+E + Sbjct: 169 KK--GYMVLVDANREFDKVYRDVEKIVFEHI 197 >gi|108758316|ref|YP_631609.1| thymidylate kinase [Myxococcus xanthus DK 1622] gi|50404253|gb|AAT76867.1| serine/threonine kinase Pkn2 associate protein 1 [Myxococcus xanthus] gi|108462196|gb|ABF87381.1| thymidylate kinase [Myxococcus xanthus DK 1622] Length = 221 Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 19/219 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCG 58 G FI EG++GAG TT + L L+ + + V TREP P R L L G Sbjct: 14 GRFIVLEGLDGAGTTTQVERLAAALRAEGHSVLTTREPSDGPVGTMIRQALTGRLGLPGG 73 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E A++FAA R DH+ + PAL G+I+LCDR++ SS AYQG L ++ Sbjct: 74 AGPLAPETLALLFAADRTDHLTARVLPALAAGQIVLCDRYVLSSLAYQGAS-----LPME 128 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ ++ V PD T+ + + ++ +R + R E D + + ++ Sbjct: 129 WVEAVNACAVSPDLTLFVGVAPEVAARRRKARGGAAELFEAD-------EAQRRIAKQYV 181 Query: 179 D--IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R + +R +D ++V L + +L+ ++ Sbjct: 182 AAIRRREKHERIVHIDGEQGIEAVTAASLVEIRKLLARK 220 >gi|292656335|ref|YP_003536232.1| thymidylate kinase [Haloferax volcanii DS2] gi|291370107|gb|ADE02334.1| thymidylate kinase [Haloferax volcanii DS2] Length = 197 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 22/215 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63 + ++ EG++G+GKTT L D TREP + EA + G D Sbjct: 1 MLVTLEGLDGSGKTTVWEALHD----AYPDAVFTREPTSDSWYGEAVNRAIDDDGAD--- 53 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQ 121 A +F A DH+ V+RPAL +GK+++ DR+ DS YAYQ RDS ++ ++ Sbjct: 54 PLATLFLFTADHADHLSRVVRPALADGKLVVSDRYSDSRYAYQAAALRDSDLRRPMEYIR 113 Query: 122 EISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I PD TI LD+ + R S + FE+ R+ + + Sbjct: 114 GIHTAFTRPPDKTIYLDVDPETAAAR---------SGATNKFEQ--AAYLADVRENYERL 162 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R +D+ S + V + + ++ ++ Sbjct: 163 VEAEPERFVRIDATQSPEDVLDAVEAALEAILAEQ 197 >gi|195952508|ref|YP_002120798.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1] gi|195932120|gb|ACG56820.1| dTMP kinase [Hydrogenobaculum sp. Y04AAS1] Length = 200 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 20/210 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + I FEGI+G+GK+T I+++ L+ +N V + REPG T E R +L S Sbjct: 6 IQKPYIIVFEGIDGSGKSTQINIVYELLKYEN--VKLLREPGSTEMGEKIRDILKSQ--- 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + + A+R +E + EG ILL DR++ S+ AYQG FL +L Sbjct: 61 KLDPKTQTFLIEASRAHMIEKHFKGF--EG-ILLLDRYIYSTIAYQGYGFGIDINFLKAL 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +PD + D+ L+R++ D FE D+ +K R +L + Sbjct: 118 NDFVCDIYIPDIVFLFDIDPRTALERLK--------REKDMFE--DLEFLKKVRDGYLKL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A+ + +D++ + +++ I NI+ Sbjct: 168 AKEY--NFYTIDASKNVEAITNEITNILKR 195 >gi|76801882|ref|YP_326890.1| thymidylate kinase [Natronomonas pharaonis DSM 2160] gi|121695514|sp|Q3IRB3|KTHY_NATPD RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|76557747|emb|CAI49330.1| thymidylate kinase [Natronomonas pharaonis DSM 2160] Length = 196 Score = 185 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 22/214 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G+GK+T + L+ L + + TREP + A + G + Sbjct: 1 MLITLEGIDGSGKSTAHAALRERLTAE--ETTFTREPTDSWYGSAVERSI---GDADADP 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----SQHLFLDSL 120 AE ++ A DH+ V+RPAL G+ ++ DR+ DS YAYQG ++ + Sbjct: 56 LAELFLYTADHADHLSRVVRPALEAGEPVVSDRYSDSRYAYQGATLEGVIDEPMAYVKRV 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + PD T+ D+P +G +R + FE D E R+ + + Sbjct: 116 HEPFTRP--PDATLYFDVPPTVGAERA---------GATNKFEAAD--YLESVRENYERL 162 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P+R H +D+ S +V + V L+ + Sbjct: 163 IEAEPERFHRIDATQSESAVVEAAVETVETLLSR 196 >gi|147919740|ref|YP_686514.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I] gi|110621910|emb|CAJ37188.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I] Length = 208 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G IS EGI+GAGK+T I +L+R++Q + + + +EP G E AR + + Sbjct: 5 KKGFLISIEGIDGAGKSTQIKMLQRWMQDRKIEHVILKEPTAGQYGREIARRAI---AHE 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E +F R + VE I PAL GK+++ DR+ S+ AYQG R + Sbjct: 62 ATSTEEELWLFMEDRKEDVEKNILPALRAGKVVVMDRYYQSNIAYQGARGLDTEKIREEN 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I+LD+ GL R+ N+ + LD FE++ +K R IFLDI Sbjct: 122 ERF---SPRPDLVIVLDIDPARGLSRIVNQ----RKSQLDAFEKE--EYLQKVRNIFLDI 172 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R I+ + S + V I+ + E + Sbjct: 173 GRQPNG--VIISADQSPEKVHQEIVKAIEERL 202 >gi|322368399|ref|ZP_08042968.1| thymidylate kinase [Haladaptatus paucihalophilus DX253] gi|320552415|gb|EFW94060.1| thymidylate kinase [Haladaptatus paucihalophilus DX253] Length = 197 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 24/214 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT +L D TREP + EA + D+ + Sbjct: 1 MLLTLEGLDGSGKTTVWEVLHEEFP----DAVFTREPTDSWYGEAVNRSI---EDDDADS 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEI 123 AE ++ A H+ + +RPAL EGK+++ DR+ DS YAYQ D ++ + I Sbjct: 54 VAELFLYTADHAAHLADTVRPALEEGKLVISDRYSDSRYAYQAVALDGVVSRPMEYI--I 111 Query: 124 SVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V + PDCTI LD+ + G R S + FE+ + + + + Sbjct: 112 GVHKPWTRPPDCTIYLDVDPETGAAR---------SGATNKFEQAG--FLAQVQSNYERL 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R VD+ S + V ++++ + + + Sbjct: 161 MDAEPGRFVRVDATQSPEDVIESVVSTIERVTED 194 >gi|284163929|ref|YP_003402208.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511] gi|284013584|gb|ADB59535.1| thymidylate kinase [Haloterrigena turkmenica DSM 5511] Length = 205 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 25/216 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63 + ++ EG++G+GKTT + LQ + D TREP + +A + D Sbjct: 1 MLVTLEGLDGSGKTT----VWEALQERYPDAVFTREPTNDSWYGDAVYRSIRDDDADSL- 55 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE 122 AE ++ A DH+ VI PAL G ++L DR+ DS +AYQG ++S L +D E Sbjct: 56 --AELFLYTADHADHLSRVIEPALEAGDLVLSDRYSDSRFAYQGATLEASDRLAVDDHLE 113 Query: 123 ISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 V + PD TI LD+ + +R + FER V E R + Sbjct: 114 YVVDVHEPFSIPPDLTIYLDVDPETAAERA---------GATNKFER--VDYLESVRDNY 162 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +PDR +D+ +V +L + ++ Sbjct: 163 ERLLEREPDRFVRIDATQEPDAVLEAVLGTLESALE 198 >gi|195867423|ref|ZP_03079427.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|195660899|gb|EDX54152.1| thymidylate kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] Length = 230 Score = 184 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 12/220 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSC 57 GLFI FEGI+GAGKT+ + L L+ + +TREPGG AAE R L Sbjct: 14 KKGLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK- 72 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++ F A ++A++R +HV+ I P L +G I++ DRF+ SSY YQG + + Sbjct: 73 NLEAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVI 132 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + ++ + D D+ V+ L R++NR+ + F+ ++ +EK + + Sbjct: 133 HHVNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQY 187 Query: 178 LDI--ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + A NQP + +D+ S V + + E+ ++ Sbjct: 188 PSVFNAYNQPKKIIFIDANKSENEVLCEVKERLLEIFKEH 227 >gi|262277219|ref|ZP_06055012.1| thymidylate kinase [alpha proteobacterium HIMB114] gi|262224322|gb|EEY74781.1| thymidylate kinase [alpha proteobacterium HIMB114] Length = 212 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 60/206 (29%), Positives = 108/206 (52%), Gaps = 8/206 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEGIEG+GK+T I+ + +FL+++ TREPGGT AE R +++ + Sbjct: 5 KGNLITFEGIEGSGKSTQINEVYKFLKKRKIKCIKTREPGGTRLAEKIRKIIIKDLKNNE 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR +H + + + +G ++LCDR++DS+YAYQ ++ LQ Sbjct: 65 DNLTELLLLFAARSNHFLKIKK-LIKKGYLVLCDRYIDSTYAYQHYEQGQDIKLINFLQN 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + ++ P T +D+PV RV+ R LD F++ K R+ F+++ + Sbjct: 124 LISKKSFPKITFFIDIPVKTSKSRVKGR------GRLDRFDKYGEKKLNKLRKSFINLKK 177 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 +R ++D + + + I+N + Sbjct: 178 KH-NRIIMIDGTKNKKDITIQIVNYL 202 >gi|167972275|ref|ZP_02554552.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|167974298|ref|ZP_02556575.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|167975305|ref|ZP_02557582.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|167988964|ref|ZP_02570635.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|168362382|ref|ZP_02695561.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|198273573|ref|ZP_03206109.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554298|ref|YP_002284433.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550427|ref|ZP_03771376.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551319|ref|ZP_03772265.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903215|gb|EDT49504.1| thymidylate kinase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209431|gb|EDU06474.1| thymidylate kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018690|gb|EDU56730.1| thymidylate kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188998196|gb|EDU67293.1| thymidylate kinase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660019|gb|EDX53399.1| thymidylate kinase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|198250093|gb|EDY74873.1| thymidylate kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541799|gb|ACI60028.1| thymidylate kinase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379134|gb|EEH01499.1| dTMP kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379581|gb|EEH01943.1| dTMP kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 229 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 110/220 (50%), Gaps = 12/220 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLSC 57 GLFI FEGI+GAGKT+ + L L+ + +TREPGG AAE R L Sbjct: 13 KKGLFIVFEGIDGAGKTSILKQLLDVLKEPKLVNKIFLTREPGGKNNTAAELIRDFFLK- 71 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++ F A ++A++R +HV+ I P L +G I++ DRF+ SSY YQG + + Sbjct: 72 NLEAFDPLTLAYLYASSRAEHVKKTINPNLEKGHIVISDRFVHSSYIYQGIVQNQSLEVI 131 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + ++ + D D+ V+ L R++NR+ + F+ ++ +EK + + Sbjct: 132 HHVNQQAIGNLEIDYIFYFDVSVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQY 186 Query: 178 LDI--ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + A NQP + +D+ S V + + E+ ++ Sbjct: 187 PSVFNAYNQPKKIIFIDANKSENEVLCEVKERLLEIFKEH 226 >gi|163795500|ref|ZP_02189466.1| Thymidylate kinase [alpha proteobacterium BAL199] gi|159179099|gb|EDP63632.1| Thymidylate kinase [alpha proteobacterium BAL199] Length = 178 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 68/177 (38%), Positives = 97/177 (54%), Gaps = 5/177 (2%) Query: 37 VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +TREPGG+P AEA R +L++ + A EA++ AAR DH+ IRPAL +G+ ++CD Sbjct: 2 LTREPGGSPGAEAIRTLLVTGEPGRWDAVTEAMLMNAARRDHLIRTIRPALAKGQWVICD 61 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 RF+DS+ AYQG L++L E +V++ PD T++LDL + GL R E+ Sbjct: 62 RFIDSTLAYQGYAGGVPLATLEALIEAAVEDTRPDLTLVLDLAPETGLARTLRGSDGTEA 121 Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELV 212 FERK + H R FL IA DRC VD+ +A + V E + Sbjct: 122 ----RFERKGLAFHAAVRDGFLRIATANLDRCVTVDAGTLPEGLIARAVAAAVSERL 174 >gi|312137024|ref|YP_004004361.1| thymidylate kinase [Methanothermus fervidus DSM 2088] gi|311224743|gb|ADP77599.1| thymidylate kinase [Methanothermus fervidus DSM 2088] Length = 189 Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats. Identities = 56/211 (26%), Positives = 103/211 (48%), Gaps = 23/211 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I EGI+GAGK+ + LL L++ Y V +EP + + R +L + Sbjct: 1 MYICIEGIDGAGKSLQVKLLSEKLKKCGYKVIQIKEPTDSEIGKLIRKLLRKEVNNAL-- 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++FAA R+ + I+ L +G +++ DR L SS+ YQ D ++E++ Sbjct: 59 --MTLLFAADRII-LSEKIKKLLKKGYLVISDRCLWSSFVYQSIDIGE-----DWVEEVN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD TI LD+ VD+ +KR + + S+ L+ K R+ +L +A+ Sbjct: 111 KYALKPDITIFLDVDVDVAMKRCEKKEIFENSSYLN-----------KARRKYLQLAKKH 159 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 I+D+ + ++V IL ++ +QK+ Sbjct: 160 --NFIIIDANNDIKTVHNEILKVIAAKIQKK 188 >gi|320100889|ref|YP_004176481.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162] gi|319753241|gb|ADV64999.1| thymidylate kinase [Desulfurococcus mucosus DSM 2162] Length = 204 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 20/222 (9%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ G FI EG++GAGKTT L L+ + + T EP + +A + + Sbjct: 1 MHGKGYFIVLEGLDGAGKTTVAHRLVEELESRGFPAIYTYEPTDSEIVKAVKSIY----S 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D A +A+ FA RL HV+++++P + +G ++ DR+ SS AYQ D Sbjct: 57 DLRDAYIDALAFALDRLIHVKSLVKPFIEKGVTVVSDRYFYSSVAYQSASG----APFDW 112 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178 + E++ + PD I LD+ + GL R ++ F E + + R+ ++ Sbjct: 113 ILEVNKYALKPDVAIYLDVDPEEGLSR--------KTTSTSRFPEYEKKEFLHRVREAYV 164 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 + + VD++ V + +IV ++ + +P Sbjct: 165 RMV--EIGLLTRVDASRPLGEVYAEVWSIVQGVIGRGHAPRG 204 >gi|219852653|ref|YP_002467085.1| thymidylate kinase [Methanosphaerula palustris E1-9c] gi|219546912|gb|ACL17362.1| dTMP kinase [Methanosphaerula palustris E1-9c] Length = 209 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 19/221 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ EGI+GAGK++ + LK L D TREPG T E+ R + +E Sbjct: 3 LITIEGIDGAGKSSLVRRLKHSLAD--LDPIFTREPGSTWIGESVRRGI----AEEIDPV 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----SQHLFLDSLQ 121 AEA++FAA H+ VIRP L + ++++ DR++DS YAYQ +L + Sbjct: 57 AEALLFAADHAAHIARVIRPGLAKNRVIISDRYVDSRYAYQSVMLKGVLPDPGTWLRQVH 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD T ++ LPV L R+ R ++FE+ V+ E +Q +L +A Sbjct: 117 Q--HWSIAPDLTFLMVLPVGTALARI-----TRGRPKKEHFEQTAVL--EAVQQQYLALA 167 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 R +P R ++D+ V + + E V++ S Sbjct: 168 RAEPSRFVVIDAELDLAEVHHFMDQTIREAVRRNAGSSRSH 208 >gi|84489171|ref|YP_447403.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091] gi|121696579|sp|Q2NHE3|KTHY_METST RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|84372490|gb|ABC56760.1| putative thymidylate kinase [Methanosphaera stadtmanae DSM 3091] Length = 195 Score = 183 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 17/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I EGI+G GKTT LK +L+++ + V EP + + R LL Sbjct: 1 MYIVLEGIDGVGKTTQTEKLKEWLEKRGFSVKTIVEPTDSDIGKIIREELLKPEATSDTN 60 Query: 65 EAE-AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A++FAA RL + + + + KIL+ DR SS YQ +S + + + +I Sbjct: 61 QQMLALLFAADRLTLKDEINQVKNNQQKILISDRSFYSSITYQ----NSTTIEPEWIYKI 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD TIILD+ D LKR +D FE K EK R+ +L + + Sbjct: 117 NKHTPRPDLTIILDIDEDEALKRCDK---------IDTFENK--EFLEKTRENYLKLVKT 165 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + +D+ + V I N + + ++ Sbjct: 166 EKN-IVKIDATPTEDVVQDEIRNQIIKYLK 194 >gi|320354474|ref|YP_004195813.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032] gi|320122976|gb|ADW18522.1| thymidylate kinase [Desulfobulbus propionicus DSM 2032] Length = 206 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 19/217 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G+ I+FEGI+G GK+T + LL +L+ + Y V TREP P + R LL Sbjct: 1 MSGGILIAFEGIDGTGKSTQLPLLAAYLRGQGYTVVETREPTDGPYGQQIR--LLYRNRH 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E E +F R HVE I+PAL G I+L DR+ S+ AYQG Sbjct: 59 QASPEQELELFLLDRRQHVEQCIKPALARGAIVLTDRYYFSTAAYQGAAGCDPAAI---- 114 Query: 121 QEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + PD ++L + R++ L+ FE+++ + EK +F Sbjct: 115 --FARHGFAPEPDLVLLLTQTPSESVTRIRE----LRGEMLNDFEQQEQL--EKVAALF- 165 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A D + +A + V +I V +L+ ++ Sbjct: 166 --ASFTHDCIVRIHAARTVAEVHASIREAVAQLLAQK 200 >gi|110669030|ref|YP_658841.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790] gi|109626777|emb|CAJ53245.1| thymidylate kinase [Haloquadratum walsbyi DSM 16790] Length = 213 Score = 182 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 27/222 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ I+ EG++G+GK+T L+ L +V TREP + + S D Sbjct: 11 MST--LITLEGLDGSGKSTVCESLQSALP----EVTFTREPTDSWYGDLVTE---SMHDD 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-----RDSSQHL 115 + AE +F A H+ VIRP+L G ++ DR+ DS +AYQ R + Sbjct: 62 SADSLAELFLFTADHAAHLNRVIRPSLASGTAVISDRYADSRFAYQAAALADSRIDAPLE 121 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ S+ E + PD T+ LD+ + G+ R + FER V E+ Sbjct: 122 YIQSIHEPFSR--RPDATVYLDIDPETGVTRA---------GATNKFER--VQYLERVAT 168 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + + +P R + VD++ S V + IV ++ VS Sbjct: 169 QYERVIAAEPTRFYRVDASQSIADVKKRVKTIVGTMLGDEVS 210 >gi|257052374|ref|YP_003130207.1| thymidylate kinase [Halorhabdus utahensis DSM 12940] gi|256691137|gb|ACV11474.1| thymidylate kinase [Halorhabdus utahensis DSM 12940] Length = 199 Score = 182 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 20/215 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G+GK++ L+ + D TREP + EA + + D Sbjct: 1 MLITLEGIDGSGKSSAWESLREHAADLDPDFTFTREPTESWYGEAVQRSIQEDDADSL-- 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE----RDSSQHLFLDSL 120 AE ++ A H+ N ++PAL G++++ DR+ DS YAYQG R F+ + Sbjct: 59 -AELFLYTADHAAHLANTVQPALDRGEVVVSDRYSDSRYAYQGATLEDRLDDPLAFVREI 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + PD TI LD+ + G +R S + FER V R + + Sbjct: 118 HEPWTRP--PDATIYLDVDAETGAER---------SGGTNKFER--VEHLRAVRANYERL 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + PDR +D+ + ++V ++ + V L+ ++ Sbjct: 165 IDDDPDRFVRIDATRAAEAVRADVFDAVERLLSEQ 199 >gi|269986146|gb|EEZ92459.1| dTMP kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 200 Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 94/214 (43%), Gaps = 15/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI EGI+ AGK T LL ++ K + V +T+EP ++ L Sbjct: 2 KGKFIVIEGIDNAGKGTQSVLLAEHIRSKGFKVILTKEPTNGILGGISKAAL--NKELNL 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +A ++F A R H+E I PA+ +G I++CDR+ S+ AY + ++ L+ Sbjct: 60 SNKALQLLFCADRAHHLETEIEPAMRDGFIVICDRYFFSTLAY----GFASNINYKWLRS 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++V PD I LDL L R + + D E+ K RQ +L IA+ Sbjct: 116 VNVSFRKPDLGIYLDLDPKTSLSRAKK--QVDGLQLFDNLEKIS-----KVRQAYLSIAK 168 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +D+ + V+ I I+ + +V Sbjct: 169 EFH--IKKIDAKGDVEVVSQRINKIIDKFFNIKV 200 >gi|288932600|ref|YP_003436660.1| thymidylate kinase [Ferroglobus placidus DSM 10642] gi|288894848|gb|ADC66385.1| thymidylate kinase [Ferroglobus placidus DSM 10642] Length = 204 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 19/212 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ EGI+GAGKTT + ++ L + V +EP + + F E Sbjct: 3 LIAVEGIDGAGKTTIANFVREELLKLGIPAIVLKEPTEGKYGKIIKE-----SEKRFDPE 57 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +F R + VE I PAL +G ++ DR+ SS AYQG R L + I+ Sbjct: 58 KELELFILDRKEDVEKNILPALNKGISVIMDRYYYSSVAYQGARGLDPEEILKVNESIA- 116 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 +PD TIILD+ +I LKR++NR L +++ +K R+IFL I R + Sbjct: 117 --PVPDLTIILDVEPEIALKRIKNRKKLTPF--------EELEYLKKVREIFLSIKRPE- 165 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +VD++ S + V ++ V EL+ R S Sbjct: 166 --IRVVDASKSLEEVKDEVIYHVLELLSSRGS 195 >gi|289808796|ref|ZP_06539425.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. AG3] gi|289829610|ref|ZP_06547165.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 160 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 7/164 (4%) Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + S G + +AE ++F AAR+ VE VI+PAL +G ++ DR S+ AYQG Sbjct: 4 IRSVGDEVITDKAEVLMFYAARVQLVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGID 63 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L +L++ + + PD T+ LD+ ++GLKR + R LD E++ + Sbjct: 64 QTMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGD------LDRIEQESFDFFNRT 117 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R +L++A R +D+ +V +I V + VQ++ + Sbjct: 118 RARYLELAAQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 160 >gi|289582282|ref|YP_003480748.1| thymidylate kinase [Natrialba magadii ATCC 43099] gi|289531835|gb|ADD06186.1| thymidylate kinase [Natrialba magadii ATCC 43099] Length = 199 Score = 181 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 23/214 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFGA 64 ++ EG++G+GKTT L+ D TREP + +A + D+ + Sbjct: 4 LVTLEGLDGSGKTTVWEALQDT----YPDAVFTREPTNDSWYGDAVYRSI---EDDDADS 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++ A DH+ I PAL G +++ DR+ DS YAYQG + + L+ + Sbjct: 57 LAELFLYTADHADHLSRKIEPALERGDLVISDRYADSRYAYQGATLAETGRIAEPLEYVV 116 Query: 125 ----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD TI LDL + +R + FE E R+ + + Sbjct: 117 DVHEPFSIEPDLTIYLDLDPETAARRA---------GSTNKFEH--AAYLESVRENYDLL 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A DR VD+ S +SV + +++ +++ Sbjct: 166 AERYADRFVRVDATQSPESVLETVRSVLATALEE 199 >gi|305663476|ref|YP_003859764.1| thymidylate kinase [Ignisphaera aggregans DSM 17230] gi|304378045|gb|ADM27884.1| thymidylate kinase [Ignisphaera aggregans DSM 17230] Length = 203 Score = 180 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 25/219 (11%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 M GLFI EGI+GAGKTT +L L+R Y T EP T E + + Sbjct: 1 MTKAGMGLFIVLEGIDGAGKTTIAKMLLDDLERNGYRTIYTFEPWTTRFVEDLKSL---- 56 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A +A+++AA RL HV+ VI PA+ +G I++CDR+ SS AYQ + + Sbjct: 57 -GMRRDAYIDALIYAADRLVHVKEVIEPAIRDGYIVVCDRYFYSSVAYQSAMG----VPM 111 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQI 176 D + +++ + PD I LD+ +IG+ R + F E ++ I K R+I Sbjct: 112 DWIITLNMFALKPDLAIYLDVEPEIGIARKR--------GYKSRFPEYEEYGILRKAREI 163 Query: 177 FLDIARNQPDRCHI-VDSAHSFQSVATNILNIVWELVQK 214 +L++ R + + + V ++ NIV+ +++ Sbjct: 164 YLEMVRRN---MLVYIYAGRDIGDVYRDVRNIVYRAIEQ 199 >gi|290558929|gb|EFD92316.1| dTMP kinase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 205 Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 17/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G FI EGI+ AGK T +LL + L+ V +T+EP ++ L Sbjct: 1 MN-GKFIVIEGIDNAGKGTQSTLLTQHLRENGLKVVLTKEPTNGILGGLSKAAL--NKEI 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F A R H+E I P + +G ++CDR+ S+ AY + L Sbjct: 58 NISGRALQLLFCADRAHHIETEIEPMMSKGLTVICDRYFFSTLAY----GFVSGINYKWL 113 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +++ PD I LDL + L R+ + ++ + K RQ ++ I Sbjct: 114 RSVNINFRKPDLGIYLDLDPKVSLSRMPKQDGIQLFDTIQKI--------SKVRQAYISI 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ VD+ S V+ I IV + + Sbjct: 166 SKEFH--LKKVDANGSVSEVSQKINKIVDKFLN 196 >gi|222457907|gb|ACM61840.1| thymidylate kinase [Yersinia pseudotuberculosis] Length = 178 Score = 179 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 54/160 (33%), Positives = 83/160 (51%), Gaps = 8/160 (5%) Query: 36 HVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 + REPGGTP AE R ++ + +AE ++ AAR+ VENVI+PAL G ++ Sbjct: 26 FLPREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKPALARGSWVV 85 Query: 95 CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 DR SS AYQG + SL++ + E PD T+ LDLP +GL R + R Sbjct: 86 GDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLARARAR---- 141 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 LD E++ + E+ R +L++A + +D++ Sbjct: 142 --GELDRIEQESLAFFERTRARYLELAASDAS-IKTIDAS 178 >gi|212213017|ref|YP_002303953.1| thymidylate kinase [Coxiella burnetii CbuG_Q212] gi|212218894|ref|YP_002305681.1| thymidylate kinase [Coxiella burnetii CbuK_Q154] gi|215918975|ref|NP_819533.2| thymidylate kinase [Coxiella burnetii RSA 493] gi|206583860|gb|AAO90047.2| thymidylate kinase [Coxiella burnetii RSA 493] gi|212011427|gb|ACJ18808.1| thymidylate kinase [Coxiella burnetii CbuG_Q212] gi|212013156|gb|ACJ20536.1| thymidylate kinase [Coxiella burnetii CbuK_Q154] Length = 161 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 8/163 (4%) Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++ A R ++ +V+ PAL G+ +L DRF D+S+AYQG ++ L Sbjct: 1 MMCPDTELLLMFAGRAQNIAHVVLPALRRGQWVLSDRFTDASFAYQGGGRGIPVKHIEEL 60 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T++LD PV +GL RV++R D E + + ++ R+ +L + Sbjct: 61 AGWVLGNLKPDLTLLLDAPVSVGLCRVKSR------GAKDRIEAEGLEFFKRVRECYLAL 114 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 A +P R ++ + +V I+ + L+ SPL +K Sbjct: 115 ANQEPARFRVIHTDQDLSNVKNQIMKAIKPLLT--ASPLPGEK 155 >gi|222480299|ref|YP_002566536.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239] gi|254808298|sp|B9LQ28|KTHY_HALLT RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|222453201|gb|ACM57466.1| thymidylate kinase [Halorubrum lacusprofundi ATCC 49239] Length = 197 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 95/215 (44%), Gaps = 23/215 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EG++G+GKTT L D TREP + EA + D+ Sbjct: 1 MLITLEGLDGSGKTTVWEALHDV----YPDATFTREPTDSWYGEAVDRSI---AADDADP 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEI 123 AE + A DH+ I PAL +G +++ DR+ DS +AYQ ++ + +D L+ I Sbjct: 54 LAELFLLTADHADHLSGTIEPALADGDLVISDRYSDSRFAYQAATLAASDVDIDRPLEYI 113 Query: 124 ----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD TI LDL +R + FE+ R+ + Sbjct: 114 KGIHAAFSRPPDATIYLDLDAREAAERA---------GRTNKFEQDG--YLAAVRKNYER 162 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +PDR +D++ S ++V + ++ EL+ + Sbjct: 163 LIDAEPDRFVRIDASQSPEAVIARVEEVLSELLGE 197 >gi|197294219|ref|YP_001798760.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|197294324|ref|YP_001798865.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|197294822|ref|YP_001799363.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853546|emb|CAM11406.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853651|emb|CAM11530.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171854149|emb|CAM12141.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L Sbjct: 1 MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + ++ A + + +I PAL+ G ++L DR+ DS++AYQ + + + + Sbjct: 58 KISPKTKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ + P T LD+ IGLKR Q + + + LD E+K + + R +L+ Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173 Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + CH ++++ +S + I+ I L+ K++ Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|296109540|ref|YP_003616489.1| thymidylate kinase [Methanocaldococcus infernus ME] gi|295434354|gb|ADG13525.1| thymidylate kinase [Methanocaldococcus infernus ME] Length = 184 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 27/207 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT +L + L + T EP R L S +D Sbjct: 1 MFIVFEGIDGSGKTTLSKMLAKELSG-----YWTCEPTDGEIGRLIRSYLSSGNIDNISL 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +++FAA R++H + I L G+ ++CDR+L SS AYQ + + L EI+ Sbjct: 56 ---SLLFAADRVEHCKE-IEKVLNSGRDVICDRYLYSSIAYQSSLGVEE----NFLWEIN 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +L + VD +KRV+ + D FE K+ EK ++ +L++A+ Sbjct: 108 KYAIKPDLVFLLVVDVDEAMKRVKGK---------DIFENKN--FLEKVQEKYLELAKRF 156 Query: 185 PDRCHIVDSAH-SFQSVATNILNIVWE 210 ++D+ + S + + V+E Sbjct: 157 --NFIVIDTTNISIEEAYNKVRVKVYE 181 >gi|13357576|ref|NP_077850.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|6898965|gb|AAF30425.1|AE002101_8 thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 700970] Length = 233 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 12/221 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLS 56 + GLFI FEGI+GAGKT+ + L L+ + +TREPGG AAE R L Sbjct: 16 LKKGLFIVFEGIDGAGKTSILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREFFLK 75 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ F A ++A++R +HV+ I P L + I++ DRF+ SSY YQG + Sbjct: 76 -NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQGIVQNQSLDV 134 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + ++ E+ D D+ V+ L R++NR+ + F+ ++ +EK + Sbjct: 135 IYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQ 189 Query: 177 FLDIAR--NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + NQP + +D+ + V + + ++ ++ Sbjct: 190 YPSVFKVYNQPKKIIFIDANKNENEVLCEVKEQLLKIFKEH 230 >gi|313125419|ref|YP_004035683.1| thymidylate kinase [Halogeometricum borinquense DSM 11551] gi|312291784|gb|ADQ66244.1| thymidylate kinase [Halogeometricum borinquense DSM 11551] Length = 199 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 21/214 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EG++G+GKTT L D TREP + +A S ++ + Sbjct: 1 MLITLEGLDGSGKTTAWEALHDV----YPDAVFTREPTESWYGDAVYR---SMSDEDADS 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQE 122 AE +F A DH+ V+RPAL + K+++ DR+ DS +AYQ D+ LD ++ Sbjct: 54 LAELFLFTADHADHLSRVVRPALADDKLVISDRYSDSRFAYQAATLEDADLRRPLDYIRG 113 Query: 123 I-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I + PD TI LD+ + R + FER + + + + Sbjct: 114 IHAAFSRPPDATIFLDVDPETAAARA---------GATNKFERAS--YLREVKANYERLI 162 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +P+R +D+ + V + V L+ + Sbjct: 163 DAEPERFVRIDATQPPEDVVEMVERSVERLLSEH 196 >gi|167971144|ref|ZP_02553421.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|170762140|ref|YP_001752100.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171916060|ref|ZP_02931503.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508501|ref|ZP_02958029.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|14285521|sp|Q9PRC5|KTHY_UREPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|189030845|sp|B1AI06|KTHY_UREP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|168827717|gb|ACA32979.1| thymidylate kinase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902601|gb|EDT48890.1| thymidylate kinase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675929|gb|EDT87834.1| thymidylate kinase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700962|gb|EDU19244.1| thymidylate kinase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 230 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 111/221 (50%), Gaps = 12/221 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGG--TPAAEAARHVLLS 56 + GLFI FEGI+GAGKT+ + L L+ + +TREPGG AAE R L Sbjct: 13 LKKGLFIVFEGIDGAGKTSILKQLLEVLKEPKLVNKIFLTREPGGKNNNAAEMIREFFLK 72 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ F A ++A++R +HV+ I P L + I++ DRF+ SSY YQG + Sbjct: 73 -NLEVFDPLTLAYLYASSRAEHVKKTINPHLEKDHIVISDRFVHSSYIYQGIVQNQSLDV 131 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + ++ E+ D D+ V+ L R++NR+ + F+ ++ +EK + Sbjct: 132 IYQINQQAIGELEIDYVFYFDVNVNNALNRMKNRFD-----NTNAFDSQNKQFYEKLLKQ 186 Query: 177 FLDIAR--NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + NQP + +D+ + V + + ++ ++ Sbjct: 187 YPSVFKVYNQPKKIIFIDANKNENEVLCEVKEQLLKIFKEH 227 >gi|197294197|ref|YP_001798738.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853524|emb|CAM11374.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L Sbjct: 1 MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + ++ A + + +I PAL+ G ++L DR+ DS++AYQ + + + + Sbjct: 58 KISPKTKYLLSLANMMQSQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ + P T LD+ IGLKR Q + + + LD E+K + + R +L+ Sbjct: 118 KIINYFLIKPKLTFYLDIDPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173 Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + CH ++++ +S + I+ I L+ K++ Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|197294352|ref|YP_001798893.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|197294409|ref|YP_001798950.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853679|emb|CAM11562.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853736|emb|CAM11659.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 18/224 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L Sbjct: 1 MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + ++ A L + +I PAL+ G ++L DR+ DS++AYQ + + + + Sbjct: 58 KISPKTKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ + P T LD+ IGLKR Q + + + LD E+K + + R +L+ Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173 Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + CH ++++ +S + I+ I L+ K++ Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|163755232|ref|ZP_02162352.1| thymidylate kinase [Kordia algicida OT-1] gi|161324652|gb|EDP95981.1| thymidylate kinase [Kordia algicida OT-1] Length = 206 Score = 178 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 14/216 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +FI+ EGI+G+GK+T + + L+ + + V++T EP + R +L G + Sbjct: 1 MKKNIFIAIEGIDGSGKSTQAKNIAKRLEAEGHKVYLTFEPTDMRIGKMIRSIL--GGQE 58 Query: 61 EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + A +F A RLDH+ N I L EG ++ DR+ SSYAY G ++ Sbjct: 59 KADEKVIAALFVADRLDHILHETNGILKKLAEGYTVITDRYYFSSYAYHGA--HMDMDWV 116 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++ + P I +D+ ++ +KR+ NR ++ LD + + Q Sbjct: 117 IQSNKMAADILKPTVNIFVDVSPEVAMKRINANRETVEIYETLDNL----KAVQSQYLQA 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F + + V+ + ++V + NI+ + + Sbjct: 173 FKKL--QHEENIVKVNGDETPENVTEALWNIIQQEL 206 >gi|289192999|ref|YP_003458940.1| thymidylate kinase [Methanocaldococcus sp. FS406-22] gi|288939449|gb|ADC70204.1| thymidylate kinase [Methanocaldococcus sp. FS406-22] Length = 185 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 27/208 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT LL L + T EP + R +L G + Sbjct: 1 MFIVFEGIDGSGKTTQSKLLAEKL-----NAFWTYEPSDSEIGRFIREIL--SGNVKVDN 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++FAA R++H +I+ L + + ++CDR+L SS AYQ F+ S+ + Sbjct: 54 KTLALLFAADRVEH-TKLIKEELKK-RAVVCDRYLYSSIAYQSVA-GVDENFIKSINRYA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +L + ++ LKRV+ + D FE+KD EK + +L++A Sbjct: 111 ---LEPDIVFLLVVDIETALKRVKTK---------DIFEKKD--FLEKVQNKYLELAEEY 156 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWEL 211 ++D+ S + V ILN + L Sbjct: 157 --NFIVIDTTKKSVKVVHEEILNYLKSL 182 >gi|296126817|ref|YP_003634069.1| thymidylate kinase [Brachyspira murdochii DSM 12563] gi|296018633|gb|ADG71870.1| thymidylate kinase [Brachyspira murdochii DSM 12563] Length = 203 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 61/221 (27%), Positives = 104/221 (47%), Gaps = 20/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I EGI+G+GK+TH LL L T EP R +LS Sbjct: 1 MN-GKLIVIEGIDGSGKSTHGMLLTNELNNIGIKSIYTFEPTHAYFGSKLRESMLSKD-- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E +F A R +HV+N+I+PA+ +G ++ DR++ SS AYQG + ++ +L Sbjct: 58 -LKPEEELSLFIADRKEHVQNMIKPAINDGYAVILDRYMYSSIAYQGAK-GIDREYIYNL 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + PD I LP++ L R+ + + +D FE K+ +K +IF Sbjct: 116 HKDFI--IEPDLVFIFHLPIETALNRI-----MEKRGFVDRFENKN--YLKKVDEIFSSF 166 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 H +++ +++ ++ I+ + ++ PL S Sbjct: 167 NAAN---IHHINADKDEEALKNELMQIIRD---SKILPLDS 201 >gi|116754547|ref|YP_843665.1| dTMP kinase [Methanosaeta thermophila PT] gi|116665998|gb|ABK15025.1| thymidylate kinase [Methanosaeta thermophila PT] Length = 202 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 25/221 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I+ EGI+GAGKTT +L++ D TREP P E AR Sbjct: 5 RGILITLEGIDGAGKTTVARMLRKRFP----DFVFTREPTDGPLGEMARRA--------- 51 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSL 120 + +F A +H+ + I P++ G++++ DR++DS AYQG R + ++ L Sbjct: 52 SGFEQLFLFMADHANHLRSCILPSINSGEVVVSDRYIDSRVAYQGALLRRTISMEWIYEL 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +MPD T++ + + L R +NR FE + ++ F + Sbjct: 112 HRP--WSLMPDLTLLFRIDPSVALMRCKNR------GATSIFEMEALL--RDVSGNFEIL 161 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 A +P+R I+++ VA + + +Q+ L S Sbjct: 162 ASREPERFVIINAEREISEVAERAASEIERFIQQNERQLGS 202 >gi|254166701|ref|ZP_04873555.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|289596133|ref|YP_003482829.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|197624311|gb|EDY36872.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|289533920|gb|ADD08267.1| thymidylate kinase [Aciduliprofundum boonei T469] Length = 197 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 19/212 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GK+T + + L +D+ +T EP T + R + +E Sbjct: 1 MFIVFEGIDGSGKSTIARRIAKHLSSLGHDIFLTEEPTTTWMGKDVRRAI----EEEKNP 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 ++A++F A R +HV I+ L +GKI++ DR++ S++AYQG + +L+ + Sbjct: 57 LSQALLFFADRAEHV-EAIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I+L + GL V R + FER+ E+ + I++D+ Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR------DFKEKFERE--EFLERVQDIYMDL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +VDS + V ++ I+ + + Sbjct: 168 ADKYG--FFVVDSNRNLNEVYEDVRKIIDDRI 197 >gi|218883455|ref|YP_002427837.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n] gi|218765071|gb|ACL10470.1| thymidylate kinase [Desulfurococcus kamchatkensis 1221n] Length = 206 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 20/214 (9%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ G FI EG++GAGKTT L L + T EP + V+ S Sbjct: 1 MHGKGCFIVLEGLDGAGKTTVARRLVEDLSSRGIPASYTYEPTDSE----IVRVIKSTYN 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A +A+ FA RL HV+N ++P L +G ++ DR+ SS AYQ + Sbjct: 57 NLRDAYIDALAFALDRLIHVKNWVKPLLDKGVTVISDRYFYSSVAYQSASG----APFEW 112 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178 + E++ + PD I LD+ + GL R S F E ++ ++ R ++L Sbjct: 113 VIEVNKFAMKPDVAIYLDIEPEEGLSRKHMHTS--------RFPEYEEKEFLQRVRSMYL 164 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +D++ V I +IV+ + Sbjct: 165 RMVEM--GLLIYIDASKPLSEVYGRIWDIVYGRL 196 >gi|108757704|ref|YP_630801.1| putative thymidylate kinase [Myxococcus xanthus DK 1622] gi|108461584|gb|ABF86769.1| putative thymidylate kinase [Myxococcus xanthus DK 1622] Length = 566 Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 5/216 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 +FI FEGI+G+GKTT +LL L+R Y V RE G PAA R + + E Sbjct: 1 MFIDFEGIDGSGKTTLSNLLAAKLKRLGYRVAHAREGGELQAPAARRIRELTRDSRLLEM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E + A ++ V+ PAL G++ + DR+L S A G L E Sbjct: 61 SPRTEFFLNLARDAQQLDEVVAPALSRGEVCITDRYLYSQLALSGGGRGLPMDELRPACE 120 Query: 123 ISVQEVMPDCTIILDLPVDIG--LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ Q + PD I++D+ D+ KR+ S R S + + R+ FL++ Sbjct: 121 LASQGLWPDLVILVDVDPDLARLRKRLGKLQSKRVSDGDSRKGLVGAGLAVRVRESFLEM 180 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKR 215 AR P R I+++ + + +++ V ++ R Sbjct: 181 ARKDPQRWIILENNDVPLRVLEQRLVDAVVARLEGR 216 >gi|254168531|ref|ZP_04875375.1| thymidylate kinase [Aciduliprofundum boonei T469] gi|197622586|gb|EDY35157.1| thymidylate kinase [Aciduliprofundum boonei T469] Length = 197 Score = 177 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 19/212 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GK+T + L + + +T EP T + R + +E Sbjct: 1 MFIVFEGIDGSGKSTIAKRIAEHLSSLGHKIFLTEEPTTTWMGKDVRRAI----EEEKNP 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 ++A++F A R +HV I+ L +GKI++ DR++ S++AYQG + +L+ + Sbjct: 57 LSQALLFFADRAEHV-EAIKKNLEDGKIVISDRYVYSTFAYQGAQMEKLMPLDKALKWLE 115 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I+L + GL V R + FER+ E+ + I++ + Sbjct: 116 GVYEPMRLDPDMVILLKIEPRRGLDFVNTR------DFKEKFERE--EFLERVQDIYMAL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A +VDS + V ++ I+ + Sbjct: 168 ADKYG--FFVVDSNRNLNEVYDDVRKIIDARI 197 >gi|15668468|ref|NP_247266.1| thymidylate kinase [Methanocaldococcus jannaschii DSM 2661] gi|2497577|sp|Q57741|KTHY_METJA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|1591015|gb|AAB98278.1| thymidylate kinase (tmk) [Methanocaldococcus jannaschii DSM 2661] Length = 188 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +FI FEGI+G+GKTT LL + + D T EP + + R +L G Sbjct: 1 MVDNMFIVFEGIDGSGKTTQSKLLAKKM-----DAFWTYEPSNSLVGKIIREIL--SGKT 53 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + A++FAA R++H +I+ L + ++CDR+L SS AYQ F+ S+ Sbjct: 54 EVDNKTLALLFAADRIEH-TKLIKEELKKRD-VVCDRYLYSSIAYQSVA-GVDENFIKSI 110 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD +L + ++ LKRV+ + D FE+KD +K + +L++ Sbjct: 111 NRYA---LKPDIVFLLIVDIETALKRVKTK---------DIFEKKD--FLKKVQDKYLEL 156 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211 A ++D+ S + V I+ + + Sbjct: 157 AEEY--NFIVIDTTKKSVEEVHNEIIGYLKNI 186 >gi|26554269|ref|NP_758203.1| thymidylate kinase [Mycoplasma penetrans HF-2] gi|46576587|sp|Q8EUV4|KTHY_MYCPE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|26454278|dbj|BAC44607.1| thymidylate kinase [Mycoplasma penetrans HF-2] Length = 214 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 11/218 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSC 57 ++ GLF++FEG + GK+T L+ + L V +TREPGGT E R +L++ Sbjct: 3 LDKGLFVAFEGPDACGKSTVSKLVYQKLINFFNNKDSVILTREPGGTEVGEKIREILVN- 61 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + EA++FAA+R +HV NVI A KI+LCDRF+ SS YQG + + + Sbjct: 62 --YDIDPRTEALLFAASRTEHVWNVILKAKANKKIILCDRFIHSSLVYQGIVKNLGYKNV 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQ 175 + + + ++ PD + L+R LD Y + +++ +K Sbjct: 120 YKVNQFGISKIKPDIVFYFSANPKVLLERKTKDKDRDIFDRLDNQYAQEENL---KKIIG 176 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + I + +D+ + +A I + E V+ Sbjct: 177 GYSSILQFDNRNVIRLDALKPVEELANKICATILERVR 214 >gi|145299023|ref|YP_001141864.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851795|gb|ABO90116.1| thymidylate kinase [Aeromonas salmonicida subsp. salmonicida A449] Length = 206 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 7/170 (4%) Query: 43 GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102 G P AE R ++ + EAE ++ A+R+ VE I+PAL EG+ ++ DR SS Sbjct: 35 GNPLAERMRAIVKEVHDERLTIEAELLLMYASRVQLVETRIKPALAEGRWVVGDRHDLSS 94 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 AYQG + ++++ + + PD T+ LD+ +GL+R ++R LD Sbjct: 95 QAYQGGGRGIDAGLIGAIKQAVLGDFKPDFTLYLDIDPALGLQRARHR------GELDRI 148 Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 E + + E+ R +L++A D ++D+ + V T I + + Sbjct: 149 ELEQLSFFERTRSRYLELAAKD-DSIRVIDAGQTPDQVKTAIEAALDHYL 197 >gi|162449104|ref|YP_001611471.1| putative thymidylate kinase [Sorangium cellulosum 'So ce 56'] gi|161159686|emb|CAN90991.1| putative Thymidylate kinase [Sorangium cellulosum 'So ce 56'] Length = 208 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 14/214 (6%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 FEGI+GAG +T L+ VHVTREP P R VL +AE Sbjct: 2 VFEGIDGAGTSTQAERFAAHLRAARRMVHVTREPSAGPVGALLRQVLTHRISLPGARQAE 61 Query: 68 --AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSLQ 121 A++F+A RLDH+ I P L +G +++ DR+ SS AYQ GE + ++ ++ Sbjct: 62 IMALLFSADRLDHLGAEIEPLLRDGYVVISDRYDLSSLAYQSTTAGEDGAGSGAIVEWIR 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E++ + PD T+++D+ +I KR + R E FE+ ++ + + + Sbjct: 122 ELNRHALRPDVTVVIDVAPEIAEKRRRGRGGAEEL-----FEKTEL--QARLAEAYRRAE 174 Query: 182 RNQP-DRCHIVDSAHSFQSVATNILNIVWELVQK 214 P DR +D S VA I + +V++ Sbjct: 175 ELVPGDRVIHIDGNGSVDEVARAITAALSAVVER 208 >gi|197294763|ref|YP_001799304.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171854090|emb|CAM12069.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 18/224 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L Sbjct: 1 MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + ++ A L + +I PAL+ G ++L DR+ DS++AYQ + + + + Sbjct: 58 KISPKTKYLLSLANMLQTQDELIIPALLSGCLVLVDRWYDSTFAYQSKGNYIDYDDKITS 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ + P T LD+ IGLKR Q + + + LD E+K + + R +L+ Sbjct: 118 KIINHFLIKPKLTFYLDIEPKIGLKRKQTQSNHK----LDLIEKKPLNYFKNVRAHYLNQ 173 Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + CH ++++ +S + I+ I L+ K++ Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|159040886|ref|YP_001540138.1| dTMP kinase [Caldivirga maquilingensis IC-167] gi|254808282|sp|A8MB58|KTHY_CALMQ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|157919721|gb|ABW01148.1| dTMP kinase [Caldivirga maquilingensis IC-167] Length = 205 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 62/210 (29%), Positives = 113/210 (53%), Gaps = 14/210 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ EGI+G GK+T I L L+R+ Y V+ T EP +P R +L ++ Sbjct: 4 FVDVEGIDGVGKSTVIRLTADELRRRGYLVYTTSEPSDSPIGLFIRRSILESNLE-VEPM 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A A++FAA R+ H VI+P + EG I++ +R+++SS AYQG SQ + ++ + E++ Sbjct: 63 ALALLFAADRVIHYNRVIKPKVKEGYIVITERYIESSVAYQG----SQGVPVEWIIEVNS 118 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD I+L+ P++ R+ NR L+YFER + ++++L AR + Sbjct: 119 MVAEPDLVIVLNAPLNTVASRLSNR------GMLEYFER-NTDFLRSVQEVYLRRARER- 170 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++D++ +V ++L ++ + + + Sbjct: 171 -NYPVIDASRVINNVVNDVLTLIEDKAKGK 199 >gi|12044856|ref|NP_072666.1| thymidylate kinase [Mycoplasma genitalium G37] gi|255660021|ref|ZP_05405430.1| thymidylate kinase [Mycoplasma genitalium G37] gi|1351454|sp|P47252|KTHY_MYCGE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1045674|gb|AAC71222.1| thymidylate kinase [Mycoplasma genitalium G37] gi|166078870|gb|ABY79488.1| thymidylate kinase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 210 Score = 176 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 112/216 (51%), Gaps = 12/216 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCG 58 MN G+F+ EG++GAGKT I K+ K NY + TREPGGT AE R +LL+ Sbjct: 1 MNKGVFVVIEGVDGAGKTALIEGFKKLYPTKFLNYQLTYTREPGGTLLAEKIRQLLLN-- 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + EA +FAAAR +H+ +I+PA+ + ++++ DRF+ SS+AYQG + Sbjct: 59 -ETMEPLTEAYLFAAARTEHISKLIKPAIEKEQLVISDRFVFSSFAYQGLSKKIGIDTVK 117 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +++ +MP+ T ILD L+R+Q R + LD F + + R +L Sbjct: 118 QINHHALRNMMPNFTFILDCNFKEALQRMQKRGND---NLLDEFIKGKNDF-DTVRSYYL 173 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + C +++ + + + I ++ +Q+ Sbjct: 174 SLV--DKKNCFLINGDNKQEHLEKFI-ELLTRCLQQ 206 >gi|6066850|emb|CAB58204.1| thymidylate kinase [Yersinia pestis] Length = 165 Score = 176 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%) Query: 24 LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81 + L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VEN Sbjct: 5 VVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64 Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 VI+PAL G ++ DR SS AYQG + SL++ + E PD T+ LDLP Sbjct: 65 VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPA 124 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +GL R + R LD E++ + E+ R +L++A + Sbjct: 125 VGLARARAR------GELDRIEQESLAFFERTRARYLELAASD 161 >gi|23009766|ref|ZP_00050693.1| COG0125: Thymidylate kinase [Magnetospirillum magnetotacticum MS-1] Length = 137 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/130 (50%), Positives = 85/130 (65%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+FI+FEG EGAGK+T I+ L LQ +V TREPGGT AEA R LL FG Sbjct: 8 GVFITFEGGEGAGKSTQIARLATALQGSGREVVTTREPGGTERAEALRAALLRGVAKPFG 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA++FAAAR+DH+E +IRPAL G ++LCDRF DS+ AYQG + SL+ + Sbjct: 68 PFAEALMFAAARIDHIETLIRPALARGAVVLCDRFADSTRAYQGAAGGLDPGLIASLERV 127 Query: 124 SVQEVMPDCT 133 +++ + PD T Sbjct: 128 TLEGLRPDLT 137 >gi|296242887|ref|YP_003650374.1| thymidylate kinase [Thermosphaera aggregans DSM 11486] gi|296095471|gb|ADG91422.1| thymidylate kinase [Thermosphaera aggregans DSM 11486] Length = 203 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 19/212 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G FI EGI+GAGKTT +L + K D T EP + + Sbjct: 5 NRGFFIVLEGIDGAGKTTLAKMLIDKFKSKGLDAIYTYEPTDS----LIVKAVKGDYSPY 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +A+ FA RL HV+ +I P L +G ++ DR+ SS AYQ + + + Sbjct: 61 RDAYIDALAFALDRLIHVKKLILPMLGKGVTVISDRYFYSSIAYQSAMGAPY----EWVA 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDI 180 E++ + PD I LD+P ++ + R F E ++ EK RQ + + Sbjct: 117 EVNKYALRPDLAIYLDIPPEVAIDR--------RKGLPSRFPEFEEREFLEKVRQYYKRM 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 VD+ Q+V + ++ + L+ Sbjct: 169 VSE--GLLVEVDATRKLQTVYSEVIEKIRSLL 198 >gi|6066852|emb|CAB58225.1| thymidylate kinase [Yersinia pseudotuberculosis] gi|6066854|emb|CAB58210.1| thymidylate kinase [Yersinia pseudotuberculosis] gi|6066856|emb|CAB58211.1| thymidylate kinase [Yersinia pseudotuberculosis] gi|6066858|emb|CAB58212.1| thymidylate kinase [Yersinia pseudotuberculosis] Length = 165 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%) Query: 24 LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81 + L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VEN Sbjct: 5 VVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64 Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 VI+PAL G ++ DR SS AYQG + SL++ + E PD T+ LDLP Sbjct: 65 VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPA 124 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +GL R + R LD E++ + E+ R +L++A + Sbjct: 125 VGLARARAR------GELDRIEQESLAFFERTRARYLELAASD 161 >gi|330507877|ref|YP_004384305.1| thymidylate kinase [Methanosaeta concilii GP-6] gi|328928685|gb|AEB68487.1| thymidylate kinase [Methanosaeta concilii GP-6] Length = 211 Score = 175 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 15/217 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVD 60 GL I+ EGI+G+GK+T I + L+ + + +T EP + A R +L Sbjct: 2 KGLLITLEGIDGSGKSTAIRHIAAKLKELVPERTLLITAEPSNSAAGRILRSEILRESTG 61 Query: 61 EFG---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLF 116 E E +F A H+ + I P+L G I+LCDR+ DS+ AYQG Sbjct: 62 ELSFAEHMEELFLFMADHARHLADTIIPSLEAGAIVLCDRYADSTAAYQGVTLKGIVPDP 121 Query: 117 LDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L ++EI + PD T++ L + ++R+ +R + FER+ + Sbjct: 122 LVWIREIYRPWNLRPDRTLLFLLDPQLSVQRISSRSGR------EKFERQ--EFLRQVDG 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 F +A +P+R I+D++ +VA + ++ + E++ Sbjct: 174 NFRRLASLEPERFVIIDASLDEDAVAESAVSSILEML 210 >gi|6066862|emb|CAB58188.1| thymidylate kinase [Yersinia enterocolitica] gi|6066864|emb|CAB58189.1| thymidylate kinase [Yersinia enterocolitica] gi|6066866|emb|CAB58190.1| thymidylate kinase [Yersinia enterocolitica] Length = 165 Score = 175 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%) Query: 24 LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81 + L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VEN Sbjct: 5 VVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64 Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 VI+PAL G ++ DR SS AYQG + SL++ + E PD T+ LDLP Sbjct: 65 VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPA 124 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 IGL R + R LD E++ + E+ R+ +L++A Sbjct: 125 IGLARARAR------GELDRIEQESLAFFERTRERYLELAATD 161 >gi|197294449|ref|YP_001798990.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853776|emb|CAM11708.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 175 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + ISFEG++G+GKTT I+ LK++ + K Y + V + G + + R++ L Sbjct: 1 MTN-KLISFEGVDGSGKTTLINELKKYFENKGYQIKVFQGLGSSIVGKEIRNLFLHQS-- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + ++ A L + +I PAL+ G ++L DR+ S++AYQ + + + + Sbjct: 58 KISPKTKYLLSLANMLQTQDELIIPALLSGYLVLVDRWYGSTFAYQSKGNYIDYDDKITS 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ + P T LD+ IG++R QN+ + + LD ERK + E R+ +L+ Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK----LDLIERKPLNYFENVRKHYLNQ 173 Query: 181 ------ARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQKRV 216 A C ++++ S + I+ I L+ K++ Sbjct: 174 HKYCNDANYNHKNCNHFLINATKSQKDNLNQIMKI---LINKQI 214 >gi|307354495|ref|YP_003895546.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] gi|307157728|gb|ADN37108.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] Length = 206 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 18/221 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G GK+T + LK L D TREPG T EA R + + Sbjct: 1 MLITIEGIDGTGKSTLVENLKGLLSD--LDPVFTREPGSTWIGEAVRRGI----AEGIDP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEI 123 AEA++F A H+E VIRP L EG+I++ DR+ DS YAYQ + ++ I Sbjct: 55 VAEALLFTADHAAHLETVIRPQLEEGRIIISDRYSDSRYAYQASTLKGILPDPMKWMKSI 114 Query: 124 SVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++P+ T +L +PV+ ++R+ + +E +FE + E+ + +L +A Sbjct: 115 HEGWTIVPELTFLLVIPVEDAVERLNKNRTHQE-----HFECASTL--EEVKNNYLVLAE 167 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 P+R +VD++ +A + E+ +K S SKK Sbjct: 168 EDPERFILVDASLDTDEIAEFVA---GEIRKKAESKNKSKK 205 >gi|6066860|emb|CAB58213.1| thymidylate kinase [Yersinia pseudotuberculosis] Length = 165 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%) Query: 24 LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81 + L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VEN Sbjct: 5 VVAVLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64 Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 VI+PAL G ++ DR SS AYQG + SL++ + E PD T+ LDLP Sbjct: 65 VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPA 124 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +GL R + R LD E++ + E+ R +L++A + Sbjct: 125 VGLARARAR------GELDRIEQESLAFFERTRARYLELATSD 161 >gi|13507745|ref|NP_109694.1| thymidylate kinase [Mycoplasma pneumoniae M129] gi|2497578|sp|P75106|KTHY_MYCPN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|1673808|gb|AAB95796.1| thymidylate kinase [Mycoplasma pneumoniae M129] gi|301633244|gb|ADK86798.1| dTMP kinase [Mycoplasma pneumoniae FH] Length = 210 Score = 174 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 11/195 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G+F++ EG++GAGKT + K+ + + +REPGGTP AE R +LL Sbjct: 1 MKQGVFVAIEGVDGAGKTVLLEAFKQRFPQSFLGFKTLFSREPGGTPLAEKIRALLLH-- 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + EA +FAA+R +HV +I+PAL + ++++ DRF+ SSYAYQG + Sbjct: 59 -EAMEPLTEAYLFAASRTEHVRQLIQPALQQKQLVIVDRFVWSSYAYQGLIKKVGLDVVK 117 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L +V + MPD T I+D + L R+ R LD +K RQ + Sbjct: 118 KLNADAVGDSMPDFTFIVDCDFETALNRMAKRGQD---NLLDNTVKKQADF-NTMRQYYH 173 Query: 179 DIARNQPDRCHIVDS 193 + N R ++D Sbjct: 174 SLVDN--KRVFLLDG 186 >gi|71274567|ref|ZP_00650855.1| Thymidylate kinase [Xylella fastidiosa Dixon] gi|71898106|ref|ZP_00680292.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|71901337|ref|ZP_00683432.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|170730823|ref|YP_001776256.1| thymidylate kinase [Xylella fastidiosa M12] gi|254808316|sp|B0U447|KTHY_XYLFM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|71164299|gb|EAO14013.1| Thymidylate kinase [Xylella fastidiosa Dixon] gi|71728881|gb|EAO31017.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|71732080|gb|EAO34136.1| Thymidylate kinase [Xylella fastidiosa Ann-1] gi|167965616|gb|ACA12626.1| dTMP kinase [Xylella fastidiosa M12] Length = 217 Score = 174 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 9 GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAATGRFS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E V R HVE++I P + G +++ DR+ S AYQG L +D+L E Sbjct: 66 PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD ++LD+P IGL+R+ R S ++FE + + + R IFL + Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--E 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209 >gi|257387466|ref|YP_003177239.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286] gi|257169773|gb|ACV47532.1| thymidylate kinase [Halomicrobium mukohataei DSM 12286] Length = 198 Score = 174 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT L+R D TREP + EA + + DE + Sbjct: 1 MLLTLEGLDGSGKTTAWETLQRH-AAVPDDAVFTREPTESWYGEAVQRSI---DDDEADS 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEI 123 AE ++ A DH+ N I PAL G++++ DR+ DS YAYQG S + L ++++ Sbjct: 57 LAELFLYTADHADHLANTIEPALDAGRLVVSDRYSDSRYAYQGATLSDRLDDALGYVRDV 116 Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD TI LD+ + +R S + FE R+ + + Sbjct: 117 HAPWTRPPDATIYLDVDAETAAER---------SGATNKFE--TADYLADVRENYERLIA 165 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +P+R +D+ ++V I V EL+ Sbjct: 166 AEPERFVRIDATRPERAVRAAIEEAVDELL 195 >gi|282163168|ref|YP_003355553.1| probable thymidylate kinase [Methanocella paludicola SANAE] gi|282155482|dbj|BAI60570.1| probable thymidylate kinase [Methanocella paludicola SANAE] Length = 201 Score = 174 bits (442), Expect = 7e-42, Method: Composition-based stats. Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+ EGI+G GKTT + LLK +L+R + +EP + + Sbjct: 3 RKGRLITIEGIDGTGKTTQVQLLKEWLERHGVEAVALKEPTQGKYGQ---EIARRAHAGS 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 FG E +F R + VE IRPAL GK ++ DR+ S+ AYQG + Sbjct: 60 FGPRDELRLFMEDRREDVEKNIRPALESGKSVIMDRYYLSNMAYQGA-RGLDPERIRLEN 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E +PD IILDL + + RV R ++ +FE + EK R+IFL I Sbjct: 119 E--AFSPVPDLIIILDLAPEKSMARVNTRKNVVG-----HFENE--AYLEKVRKIFLAIG 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + P+ ++++ V I++ V + ++ Sbjct: 170 KQ-PN-AVVINTEAPVADVHERIVDAVRDRLR 199 >gi|255513737|gb|EET90002.1| dTMP kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 215 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 102/222 (45%), Gaps = 21/222 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GK+T +L +L+ T EP P + + +++S A Sbjct: 1 MLIAFEGIDGSGKSTQAEMLDSYLKSSGIAAVTTAEPTSGPIGKLIKEIVVSKK--PINA 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++F A R H+E I P++ EGK+++ DR++ S+ AY + + I+ Sbjct: 59 LAMQMLFTADRAYHLETTIMPSISEGKVIITDRYIGSTIAYGTAAGIDKRFLVG----IN 114 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------------KDVMIH 170 + + PD T ++D ++R+ R + E+ + + Sbjct: 115 RKFIPPDITFVIDANPRKAVERLNRRAAEFLKNKTALMEKDGELFKQKSTTTMFEKLGFL 174 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +L++ ++ + ++++ S S++ I+NI+ + Sbjct: 175 GRARLAYLEMQKDFKN-YYVINGNRSKGSISKEIINILDTKI 215 >gi|88603867|ref|YP_504045.1| thymidylate kinase [Methanospirillum hungatei JF-1] gi|121696415|sp|Q2FS90|KTHY_METHJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|88189329|gb|ABD42326.1| thymidylate kinase [Methanospirillum hungatei JF-1] Length = 206 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 20/221 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+G+GK+T L +L N +T EPG T EA R + + Sbjct: 1 MLVTIEGIDGSGKSTLHKALGPYLADLNP--VITCEPGSTWIGEAVRRAIR----EHADP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEI 123 AEA++F A H+ V+RPAL E ++++ DR++DS YQ D L+ + Sbjct: 55 IAEALLFVADHAAHLREVVRPALSEDRLVISDRYIDSRLVYQQVTLDGIIPDPRTWLRAV 114 Query: 124 SVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +MPD TI+L +PV + L+R R ++FE++ V+ K ++ ++ + Sbjct: 115 HQGWTIMPDLTILLAVPVPVALERTGKR------GSGEHFEQESVL--TKVQEYYMQLVE 166 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 R I+D + +IL + E ++ R ++ KK Sbjct: 167 EDTARFLILDGTLPPE----HILKVAGEAIRFRFDEMNRKK 203 >gi|6066870|emb|CAB58192.1| thymidylate kinase [Yersinia enterocolitica] gi|6066874|emb|CAB58194.1| thymidylate kinase [Yersinia enterocolitica] Length = 165 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 8/163 (4%) Query: 24 LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81 + L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VEN Sbjct: 5 VVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64 Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 VI+PAL G ++ DR SS AYQG + SL++ + E PD T+ LDLP Sbjct: 65 VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPV 124 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 IGL R + R LD E++ + E+ R+ +L++A Sbjct: 125 IGLARARAR------GELDRIEQESLAFFERTRERYLELAATD 161 >gi|55379836|ref|YP_137686.1| thymidylate kinase [Haloarcula marismortui ATCC 43049] gi|59798125|sp|Q5UXM3|KTHY_HALMA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|55232561|gb|AAV47980.1| thymidylate kinase [Haloarcula marismortui ATCC 43049] Length = 195 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 19/210 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT L+ + TREP T +A + + D+ + Sbjct: 1 MLVTLEGLDGSGKTTVWERLRSD-DAVPSETVFTREPTDTWYGDAVQRSI---DNDDADS 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 AE ++ A H+ +RPAL EG++++ DR+ DS YAYQG + F D L + Sbjct: 57 LAELFLYTADHAAHLSETVRPALNEGRLVVSDRYSDSRYAYQGATLAGSGTFDDPLSYVR 116 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T+ LDL + +R S + FE R + + Sbjct: 117 EVHAPWTRPPDRTVYLDLDPETAARR---------SGATNKFE--TAEYLTTVRDNYERL 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R VD+ +V + + + Sbjct: 166 IEADPERFVRVDATADPDTVYERVRAAILD 195 >gi|15790812|ref|NP_280636.1| thymidylate kinase [Halobacterium sp. NRC-1] gi|169236558|ref|YP_001689758.1| thymidylate kinase [Halobacterium salinarum R1] gi|14285513|sp|Q9HNV4|KTHY_HALSA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|229621738|sp|B0R6P3|KTHY_HALS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|10581368|gb|AAG20116.1| thymidylate kinase [Halobacterium sp. NRC-1] gi|167727624|emb|CAP14412.1| dTMP kinase [Halobacterium salinarum R1] Length = 199 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 23/200 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++G+GKTT L+ + V T EP + +A R S + Sbjct: 1 MLVTLEGLDGSGKTTVWESLRA---SHDDGVTFTAEPTDSQYGQAVRR---SESAADADP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS----QHLFLDSL 120 AE +F A DH+ V+ PAL G +++ DR+ DS YAYQG + ++ + Sbjct: 55 IAELFLFTADHADHLSRVVSPALDRGDVVISDRYSDSRYAYQGATLADTVPRAMEYVRGI 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD T+ D+ D G R S + FE R + + Sbjct: 115 HQPWTRP--PDVTLYFDVDPDTGAAR---------SGATNKFE--TAAFLADVRANYEQL 161 Query: 181 ARNQPDRCHIVDSAHSFQSV 200 P+R +D+ S ++V Sbjct: 162 IDYTPERFVRIDATQSPEAV 181 >gi|6066868|emb|CAB58191.1| thymidylate kinase [Yersinia enterocolitica] gi|6066872|emb|CAB58193.1| thymidylate kinase [Yersinia enterocolitica] Length = 165 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 8/163 (4%) Query: 24 LKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVEN 81 + L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VEN Sbjct: 5 VVATLRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVEN 64 Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 VI+PAL G ++ DR SS AYQG + SL++ + E PD T+ LDLP Sbjct: 65 VIKPALARGSWVVGDRHDLSSQAYQGGGRGIDINLMTSLRDTVLGEFRPDLTLYLDLPPV 124 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 IGL R + R LD E++ + E+ R+ +L +A Sbjct: 125 IGLARARAR------GELDRIEQESLAFFERTRERYLKLAATD 161 >gi|154151261|ref|YP_001404879.1| thymidylate kinase [Candidatus Methanoregula boonei 6A8] gi|153999813|gb|ABS56236.1| dTMP kinase [Methanoregula boonei 6A8] Length = 206 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 111/211 (52%), Gaps = 16/211 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ EGI+G+GK+T ++ LK L+ + TREPG T ++ R + ++ Sbjct: 3 LVTLEGIDGSGKSTLLAALKESLEDLSP--VFTREPGATWVGDSVRRAI----AEQIDPV 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEIS 124 EA +F A H+ V+RPAL E K+++ DR+ DS +AYQ + L+ + Sbjct: 57 CEATLFVADHAAHLATVVRPALAEHKLVISDRYSDSRFAYQAVTLEGVIPEPERWLRAMH 116 Query: 125 VQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++PD T +L +P+D L R+ + ++FER+DV+ EK + +++ AR Sbjct: 117 DGWSIVPDKTFLLAIPIDDALARLSKKSGR------EHFERRDVL--EKVQNRYMEFARA 168 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +PDR IVDS +VA + + ++V + Sbjct: 169 EPDRFVIVDSMLDKDAVAEFVAGAIRQVVAE 199 >gi|197294491|ref|YP_001799032.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853818|emb|CAM11759.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 215 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 60/224 (26%), Positives = 112/224 (50%), Gaps = 18/224 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + ISFEGI+G+GKTT I+ LK F + K Y V + G + + R++ L Sbjct: 1 MTN-KLISFEGIDGSGKTTLINELKAFFENKGYKTKVFQGLGSSIVGKEIRNLFLHQS-- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + ++ A L + +I PAL+ G ++L DR+ S++AYQ + + + + Sbjct: 58 KISLKTKYLLSLANMLQTQDELIFPALLSGYLVLVDRWYGSTFAYQSKGNYIDYDDKITS 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ + P T LD+ IG++R QN+ + + LD ERK + + R +L+ Sbjct: 118 KIINHFLIKPKLTFYLDIDPKIGIQRKQNQTNHK----LDLIERKPLNYFKNVRAHYLNQ 173 Query: 181 AR------NQPDRCH--IVDSAHSFQSVATNILNIVWELVQKRV 216 + + CH ++++ +S + I+ I L+ K++ Sbjct: 174 QKYCNDSNCKHQNCHHFLINATNSQKENLDQIMKI---LINKQI 214 >gi|215400691|ref|YP_002332309.1| putative thymidylate kinase [Lactococcus lactis] gi|169641050|gb|ACA61269.1| putative thymidylate kinase [Lactococcus lactis] Length = 251 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 15/214 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + L I FEG++G+GKTT I +L ++ + K V T++P + L G+ Sbjct: 53 MKN-LLIVFEGLDGSGKTTQIDMLYQWFENKKLKVFTTKQPTDYYRNDKRVRDYLDNGIA 111 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A++ AA R + + I P + E I +CDR+L SS A+ R L Sbjct: 112 P-NMYSIALLAAADRTYQITSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEIL--- 166 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I+ PD T+ LD+P + L RV+ R +E K+ ++ + RQ FLD+ Sbjct: 167 -MINKGVPTPDVTVFLDVPPERALDRVRQRDGKDI-----KYEEKNELVFNQVRQNFLDV 220 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P IVDS V I N V E++ K Sbjct: 221 L---PKNALIVDSTLGIDKVHQIITNFVSEVMDK 251 >gi|15837182|ref|NP_297870.1| thymidylate kinase [Xylella fastidiosa 9a5c] gi|9105444|gb|AAF83390.1|AE003904_11 thymidylate kinase [Xylella fastidiosa 9a5c] Length = 217 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 9 GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E V R HVE++I P + G +++ DR+ S AYQG L +D+L E Sbjct: 66 PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD ++LD+P IGL+R+ R S ++FE + + + R IFL + Sbjct: 122 NAFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--E 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 173 LPSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 209 >gi|256810617|ref|YP_003127986.1| thymidylate kinase [Methanocaldococcus fervens AG86] gi|256793817|gb|ACV24486.1| thymidylate kinase [Methanocaldococcus fervens AG86] Length = 186 Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 27/203 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT LL T EP + + R +L G + Sbjct: 1 MFIVFEGIDGSGKTTQSKLLAEK-----IKAFWTYEPSNSDVGKFIREIL--SGNIKVDD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++FAA R++H + + + ++CDR+L SS AYQ + D + I+ Sbjct: 54 KTLALLFAADRVEHTKLIKEKLKEKD--VVCDRYLYSSIAYQSVAGVDE----DFINSIN 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +L + +++ LKRV+ + D FE+KD K + +L++A Sbjct: 108 KYALKPDIVFLLIVDIEVALKRVKTK---------DIFEKKD--FLMKVQDKYLELAEKY 156 Query: 185 PDRCHIVDSA-HSFQSVATNILN 206 ++D+ S + V IL Sbjct: 157 --NFIVIDTTNKSIKDVHKEILE 177 >gi|330943542|gb|EGH45881.1| thymidylate kinase [Pseudomonas syringae pv. pisi str. 1704B] Length = 143 Score = 172 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 49/145 (33%), Positives = 82/145 (56%), Gaps = 6/145 (4%) Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 ++ AAR H+ VIRPAL G+++LCDRF D++YAYQG H + +L++ ++ Sbjct: 1 MLVFAARAQHLAEVIRPALTRGEVVLCDRFTDATYAYQGGGRGLPHERIAALEQFVQGDL 60 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD T++ DLPV+IGL R R LD FE++ + R +L+ A +P R Sbjct: 61 RPDLTLVFDLPVEIGLSRAAAR------GRLDRFEQEGRTFFDAVRSTYLERANAEPARY 114 Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213 +VD+ + V ++ ++ +L++ Sbjct: 115 RLVDAGQTLADVQASLDTLLPQLLE 139 >gi|325187412|emb|CCA21950.1| thymidylate kinase putative [Albugo laibachii Nc14] Length = 228 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 20/226 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI EG++ GKTT LL L + + + R P T L+ ++ Sbjct: 4 KRGVFILIEGLDCCGKTTQTKLLHEALTKMSSAAELLRFPDRTTPTGKLIDAYLTSKDEQ 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F A R + I L GK ++ DR+ S + + ++ Sbjct: 64 VNDRAIHLLFTANRWE-AAEKIEAILNSGKNIVMDRYAYSGAVFSASKSGMD---MNWCW 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 + + PD I LDLPVD KR E + +E +V EK R F + Sbjct: 120 QPEIGLPRPDAVIFLDLPVDSASKR--------EDYGAERYE--NVEFQEKVRLNFHKLI 169 Query: 181 ----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ-KRVSPLSS 221 ++ R H +D+ + + V + + +Q + +PL+S Sbjct: 170 ELDHSQKDESRWHFIDANDTIEKVQARVFEVAQRCIQVSQYTPLAS 215 >gi|126179517|ref|YP_001047482.1| thymidylate kinase [Methanoculleus marisnigri JR1] gi|166221756|sp|A3CVV0|KTHY_METMJ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|125862311|gb|ABN57500.1| thymidylate kinase [Methanoculleus marisnigri JR1] Length = 205 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 16/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+G+GK+T ++ + D TREPG T E+ R + + Sbjct: 1 MLITIEGIDGSGKSTLLAR--LRELLADLDPLFTREPGATWVGESVRRAI----AERMDP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEI 123 EA++F A H++ VIRPAL EG++++ DR+ DS +AYQ D L L+ I Sbjct: 55 ITEALLFCADHAAHIDTVIRPALDEGRLVISDRYADSRFAYQPVVLDGVLPDPLSWLRRI 114 Query: 124 SVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T +L LPV+ + R+ +YFE + I E+ ++ +L++A Sbjct: 115 HEGWSIRPDRTFLLVLPVEDAVSRLG------PEKKREYFE--NAAILEQVQENYLNLAA 166 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P R +VD+ + VA I + Sbjct: 167 ADPLRFVVVDALLPKEEVARFIAGEI 192 >gi|182682175|ref|YP_001830335.1| thymidylate kinase [Xylella fastidiosa M23] gi|254808315|sp|B2I7G4|KTHY_XYLF2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|182632285|gb|ACB93061.1| dTMP kinase [Xylella fastidiosa M23] gi|307578444|gb|ADN62413.1| thymidylate kinase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 217 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 108/218 (49%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 9 GMLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFS 65 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E V R HVE++I P + G +++ DR+ S AYQG L +D+L E Sbjct: 66 PEEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEA 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD ++LD+P IGL+R+ R S ++FE + + + R IFL + Sbjct: 122 NAFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--E 172 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 173 LPSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 209 >gi|294979332|pdb|2WWF|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Tmp And Adp gi|294979333|pdb|2WWF|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Tmp And Adp gi|294979334|pdb|2WWF|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Tmp And Adp gi|294979335|pdb|2WWG|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Dgmp And Adp gi|294979336|pdb|2WWG|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Dgmp And Adp gi|294979337|pdb|2WWG|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Dgmp And Adp gi|294979338|pdb|2WWH|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Ap5dt gi|294979339|pdb|2WWH|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Ap5dt gi|294979340|pdb|2WWH|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Ap5dt gi|294979341|pdb|2WWI|A Chain A, Plasmodium Falciparum Thymidylate Kinase In Complex With Aztmp And Adp gi|294979342|pdb|2WWI|B Chain B, Plasmodium Falciparum Thymidylate Kinase In Complex With Aztmp And Adp gi|294979343|pdb|2WWI|C Chain C, Plasmodium Falciparum Thymidylate Kinase In Complex With Aztmp And Adp Length = 212 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 21/212 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG++ +GK+T LL +L+ N +V P L Sbjct: 8 KKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENS- 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ I+ L++G ++CDR+ S AY + Sbjct: 67 MSNETIHLLFSANRWEHMNE-IKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKT---WCM 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIHEKRRQIFLD 179 + PD L++P + R DY E + V +K + + Sbjct: 123 NPDQGLIKPDVVFYLNVPPNYAQNR------------SDYGEEIYEKVETQKKIYETYKH 170 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A D +D+ + + +I+ V ++ Sbjct: 171 FAHE--DYWINIDATRKIEDIHNDIVKEVTKI 200 >gi|124807055|ref|XP_001350897.1| thymidylate kinase, putative [Plasmodium falciparum 3D7] gi|23497027|gb|AAN36577.1|AE014852_21 thymidylate kinase, putative [Plasmodium falciparum 3D7] Length = 210 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 21/212 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG++ +GK+T LL +L+ N +V P L Sbjct: 6 KKGKFIVFEGLDRSGKSTQSKLLVEYLKNNNVEVKHLYFPNRETGIGQIISKYLKMENS- 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ I+ L++G ++CDR+ S AY + Sbjct: 65 MSNETIHLLFSANRWEHMNE-IKSLLLKGIWVVCDRYAYSGVAYSSGALNLNKT---WCM 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIHEKRRQIFLD 179 + PD L++P + R DY E + V +K + + Sbjct: 121 NPDQGLIKPDVVFYLNVPPNYAQNR------------SDYGEEIYEKVETQKKIYETYKH 168 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A D +D+ + + +I+ V ++ Sbjct: 169 FAHE--DYWINIDATRKIEDIHNDIVKEVTKI 198 >gi|313616705|gb|EFR89481.1| thymidylate kinase [Listeria innocua FSL S4-378] Length = 158 Score = 171 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 48/154 (31%), Positives = 82/154 (53%), Gaps = 4/154 (2%) Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E + E ++ A AR HV IRPAL GK +LCDRF+DSS AYQG + Sbjct: 8 NEEMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVL 67 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + ++++ +PD T LD+P ++GL R+ + ++ +++D+ HEK + + Sbjct: 68 QVNLYAIEDTIPDRTYYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQNGYE 123 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I + PDR VD+ + + + T IL + + + Sbjct: 124 KIIQMFPDRFMRVDATKTPEEITTIILADILKQL 157 >gi|166366993|ref|YP_001659266.1| thymidylate kinase [Microcystis aeruginosa NIES-843] gi|166089366|dbj|BAG04074.1| thymidylate kinase [Microcystis aeruginosa NIES-843] Length = 207 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 20/218 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58 FI FEGI+G+G +T LL+ + ++ ++ EP R + L+S Sbjct: 2 KPKFIVFEGIDGSGTSTQAKLLQEYFLKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIK 61 Query: 59 VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 A +FAA R DH+ N V + E ++ R+ SS AY + Sbjct: 62 DQNQFDRQMAYLFAADRHDHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNC----NNP 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L +++++ PD I +D+ DI L R++NR A + +E+++ ++ K R Sbjct: 118 EELAFVRQLNQHFPNPDIVIYIDVLPDISLARIKNR------AITEVYEKQEKLM--KVR 169 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q+F+ I + D C +D + + +++ NI+N + L+ Sbjct: 170 QMFIQIFKEYKDNCLQLDGSDTIENLHRNIINYLERLI 207 >gi|304314109|ref|YP_003849256.1| thymidylate kinase [Methanothermobacter marburgensis str. Marburg] gi|302587568|gb|ADL57943.1| predicted thymidylate kinase [Methanothermobacter marburgensis str. Marburg] Length = 194 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 24/194 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 ++I FEGI+G+GKTTH L +L+ Y V REP + R +L S G Sbjct: 1 MYICFEGIDGSGKTTHSVLTAEWLRENGYRVFTVREPTDSRIGGLIREMLSSPDARTPDG 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A++FAA RL + G +++ DR SS YQ + + EI Sbjct: 61 QRILALLFAADRLTLRSKIEGEW--SGSVVVSDRCYYSSMVYQ--------EPAEWVSEI 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD I+LDL V++ ++R D FE D + R+ +L++A Sbjct: 111 NRFAPQPDIVILLDLDVELAMERC---------GGTDEFE--DPSFLSRVRERYLELA-- 157 Query: 184 QPDRCHIVDSAHSF 197 + +IVD+A Sbjct: 158 DKNEFYIVDAARGL 171 >gi|325958282|ref|YP_004289748.1| Thymidylate kinase [Methanobacterium sp. AL-21] gi|325329714|gb|ADZ08776.1| Thymidylate kinase [Methanobacterium sp. AL-21] Length = 191 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 23/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63 ++I EGI+G+GKTT I LL+ ++Q+ DV EP + R +L + ++E Sbjct: 1 MYICLEGIDGSGKTTQIKLLESWIQKCGIDVLRVFEPTDNEVGKLIRKLLQNPDAINENF 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A++FAA R + + I A KI++ DR SS YQ + + + EI Sbjct: 61 QITLALLFAADRTVLMRD-ITEAEALAKIVISDRSFYSSMVYQNDS--------EWIAEI 111 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD I+LD+ + + R +D FE ++ + +L++A Sbjct: 112 NKHAKQPDLVILLDINPETAVSRC---------DGMDSFEEQN--FLASTAKKYLELA-- 158 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 +V++ + V +I IV + Sbjct: 159 DHQNFMVVNANNGINKVHDDIKRIVAHKL 187 >gi|300871563|ref|YP_003786436.1| thymidylate kinase [Brachyspira pilosicoli 95/1000] gi|300689264|gb|ADK31935.1| thymidylate kinase [Brachyspira pilosicoli 95/1000] Length = 203 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 16/208 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EGI+G+GK+T L L + N + T EP R +LS + Sbjct: 2 KGKLIVIEGIDGSGKSTIAKKLAETLNKNNIETIYTFEPTNAYYGAKLRDTMLS---KDM 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E +F R +H+ +I+P+L EGK ++ DR++ SS AYQG + + ++ E Sbjct: 59 DLDRELELFVDDRKEHIRLMIKPSLEEGKTVVLDRYMYSSIAYQGAK-GIDIEKIKNMHE 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++PD I LPV+ L R+ + + +D FE + +K IF Sbjct: 118 --SFILIPDIVFIFHLPVEKSLNRI-----MEKRGFIDRFENE--EYLKKVDSIFSSF-- 166 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 N+P H +++ S + ++ I+ + Sbjct: 167 NEPFIYH-INADKSIDDINKELIEILKQ 193 >gi|170077931|ref|YP_001734569.1| thymidylate kinase [Synechococcus sp. PCC 7002] gi|169885600|gb|ACA99313.1| thymidylate kinase [Synechococcus sp. PCC 7002] Length = 219 Score = 170 bits (433), Expect = 8e-41, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 80/213 (37%), Gaps = 19/213 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI FEGI+G+G +T LL + QR+ ++ EP R L Sbjct: 8 KFIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDP 67 Query: 65 ----EAEAIVFAAARLDHVENVI---RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A +FA R DH+ N I L G ++ R+ SS AY + Sbjct: 68 VQLNRQLAYLFAGDRHDHLYNEIDGVFKQLAAGIQVITTRYYFSSLAYNA----NNAAEY 123 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + ++ PD DLPV++ L+RVQ R + RQ + Sbjct: 124 EFIYRLNQDFPNPDLVFYCDLPVEVALERVQRRSHQEIYETKAKL--------TQVRQNY 175 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 I + P +D+ +++ IL + + Sbjct: 176 QQIFQTYPGNWQQLDATQPPETIHQQILQTIAD 208 >gi|257457560|ref|ZP_05622727.1| thymidylate kinase [Treponema vincentii ATCC 35580] gi|257444946|gb|EEV20022.1| thymidylate kinase [Treponema vincentii ATCC 35580] Length = 209 Score = 170 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 23/215 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 F+ FEG++G G T+ + LL+ + V+ T EP G + R L G F Sbjct: 6 FVVFEGLDGTGTTSQLRLLREAFTTRGLQDTVYFTCEPTGDSIGKLIREAL--SGAAGFD 63 Query: 64 AEAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A+ A +F A R +HV ++ I L GK + DR+L SS AYQG + Q Sbjct: 64 AKTIAYLFGADRCEHVYGKSGILTQLQAGKAVFSDRYLFSSLAYQGLDAGKELA-----Q 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 I+ +P+ DLP + R++ R RE +E++ +K + I Sbjct: 119 TINAPFPLPEYLFFFDLPASTAMARIEKRNIPREI-----YEKET--FQQKVAAEYQAIF 171 Query: 181 ---ARNQPD-RCHIVDSAHSFQSVATNILNIVWEL 211 A PD R +D++ + + + NI IV L Sbjct: 172 RHYAETAPDMRILRIDASKTIEEIHENIWRIVCNL 206 >gi|325290200|ref|YP_004266381.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271] gi|324965601|gb|ADY56380.1| Thymidylate kinase [Syntrophobotulus glycolicus DSM 8271] Length = 210 Score = 170 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 17/214 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG FI EG +G+G +T +LLKR+++ + V + +EP P R VL V Sbjct: 7 SGKFIVLEGTDGSGISTQSALLKRYIENKHGKKVLLAKEPSEGPIGTLIRQVLTH-RVQG 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E+ ++FAA R+DH+++ I PAL +G +++CDR++ SS+AYQG + Q + Sbjct: 66 IREESLTLMFAADRMDHLQHKIIPALEQGALVICDRYVWSSFAYQGIKIDEQ-----WIL 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + + PD TI + + + ++R++ +D FE++ ++ ++ ++ I Sbjct: 121 ETNKYALKPDLTIFVKVRPQVSMERIRQ-----NRFQIDVFEQEVIL--KEVMANYIKIK 173 Query: 182 RN---QPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q + +D + +++A I V L+ Sbjct: 174 EAWGSQGENILELDGEDTVENIADRISKKVDSLL 207 >gi|126642563|ref|YP_001085547.1| thymidylate kinase [Acinetobacter baumannii ATCC 17978] Length = 151 Score = 170 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 8/157 (5%) Query: 53 VLLSCGVDE-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 +LL+ DE + E ++ AAR H++ VI PAL KI+L DRF D+S+AYQ Sbjct: 1 MLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRG 60 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L L + + MP+ T LD P+++G+ R + R LD FE++ + Sbjct: 61 LSQDKLQLLNQ-NFVSRMPEVTFWLDAPIELGMNRARER------GALDRFEQEKLSFFT 113 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 K R+ + + + +P+R +D+ S V L + Sbjct: 114 KVREGYETLWKVEPERIKRLDATQSPDQVFEQALQYL 150 >gi|15679753|ref|NP_276871.1| thymidylate kinase [Methanothermobacter thermautotrophicus str. Delta H] gi|6016460|sp|O27793|KTHY_METTH RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|2622895|gb|AAB86231.1| thymidylate kinase [Methanothermobacter thermautotrophicus str. Delta H] Length = 194 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 24/205 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG- 63 ++I FEGI+G+GKTTH +L +L+ Y VH REP + R +L S Sbjct: 1 MYICFEGIDGSGKTTHAALTASWLRENGYMVHEVREPTDSNIGSLIRSMLSSPDARTPDV 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A++FAA RL + + I E +++ DR SS YQG + + EI Sbjct: 61 QRMLALLFAADRL-TLRSKIEGDWAE-DVVVSDRCYYSSMVYQGPE--------EWVCEI 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD I+LD+ V++ ++R D FE D + R+ +L++A Sbjct: 111 NRFAPRPDVVILLDIDVEVAMERC---------GGTDEFE--DPLYLAGVRERYLELA-- 157 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + + V++ + +I I+ Sbjct: 158 DKNGFYTVNAERGVNLIQRDIRRIL 182 >gi|281490597|ref|YP_003352577.1| thymidylate kinase [Lactococcus lactis subsp. lactis KF147] gi|161702099|gb|ABX75570.1| Thymidylate kinase [Lactococcus lactis subsp. lactis KF147] Length = 199 Score = 170 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 15/214 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + L I FEG++G+GKTT I +L ++ + K +V T++P + L G+ Sbjct: 1 MKN-LLIVFEGLDGSGKTTQIDMLHQWFENKKLEVFTTKQPTDYYRNDKRVRDYLDNGIA 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A++ AA R + + I P + E I +CDR+L SS A+ R L Sbjct: 60 P-NMYSIALLAAADRTYQISSEIFPKISESNI-ICDRYLYSSLAFFKARGIDYKEIL--- 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I+ +PD T+ LD+P + L+RV+ R +E K+ ++ + RQ FLD+ Sbjct: 115 -MINKGVPIPDVTVFLDVPPERALERVRQRDGEDI-----KYEEKNELVFNQVRQNFLDV 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P IVDS V I N V E++ K Sbjct: 169 L---PKNALIVDSTLGIDKVHQIITNFVSEVMGK 199 >gi|225018256|ref|ZP_03707448.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum DSM 5476] gi|224948953|gb|EEG30162.1| hypothetical protein CLOSTMETH_02194 [Clostridium methylpentosum DSM 5476] Length = 205 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 15/213 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI FEG++G+GK T I LL +R+ T EP + A R L G Sbjct: 3 KFIVFEGLDGSGKGTQIRLLCEEFKRRGEAFQQTAEPTFSVTGGAIRDAL--NGNHPRHP 60 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +F R+ H + I L +GK ++CDR+ SS+AYQG Q + +L Sbjct: 61 AELAALFLTDRIYHNTGKFDGIELLLSQGKHVICDRYYYSSFAYQGTGCDMQWVMEMNLN 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ PD I LD+ RV + L+ FE+ D+ R F+ Sbjct: 121 CPNIR--KPDLCIYLDVDPQRSKARVDG-----ANKSLEIFEQ-DIAQITAIRNKFMKAF 172 Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWELV 212 +R ++D+ VA ++ + V ++ Sbjct: 173 ELLGERETIVLIDADRPVDEVAADVWDAVKRIL 205 >gi|119874730|gb|ABM05842.1| Tmk [Yersinia pestis] Length = 150 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 55/154 (35%), Positives = 81/154 (52%), Gaps = 8/154 (5%) Query: 28 LQRKNY-DVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAIVFAAARLDHVENVIRP 85 L+ + D+ TREPGGTP AE R ++ + +AE ++ AAR+ VENVI+P Sbjct: 3 LRAQGINDIVFTREPGGTPLAEKLRDLIKQGIDGEVLTDKAEVLMLYAARVQLVENVIKP 62 Query: 86 ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145 AL G ++ DR SS AYQG + SL++ + E PD T+ LDLP +GL Sbjct: 63 ALARGSWVVGDRHDLSSQAYQGGGRGIDSQLMASLRDTVLGEFRPDLTLYLDLPPAVGLA 122 Query: 146 RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 R + R LD E++ + E+ R +L+ Sbjct: 123 RARAR------GELDRIEQESLAFFERTRARYLE 150 >gi|284044447|ref|YP_003394787.1| thymidylate kinase [Conexibacter woesei DSM 14684] gi|283948668|gb|ADB51412.1| thymidylate kinase [Conexibacter woesei DSM 14684] Length = 210 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 29/221 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G F+ EG++GAG TT L L+ + + V +T+EP P R + G Sbjct: 5 RGRFVVVEGLDGAGTTTQAERLAAMLRTRGGHAVELTKEPTNGPLGAVLRQAI--EGRVA 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 A A+ FAA R DH+ N + AL G+ ++ DR++ SS AY S+ + Sbjct: 63 LDPVALALAFAADRADHLFNPVNGVVAALDAGRWVVSDRYVLSSLAYNRGGVVSR----E 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-----R 173 + E++ + + PD T+ +D+ +I L+R+ R S E + H + Sbjct: 119 WVAELNARAIAPDLTVFVDVDPEICLERIGARSSADE------------LFHSREQLVAV 166 Query: 174 RQIFLDIARN--QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + D+ VD + S +V I V E + Sbjct: 167 DRNYRDLIAAGHVHGPLATVDGSGSIDAVHDAIWTAVGEAL 207 >gi|115373942|ref|ZP_01461233.1| integral membrane protein with kinase activity [Stigmatella aurantiaca DW4/3-1] gi|310817945|ref|YP_003950303.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|115369070|gb|EAU68014.1| integral membrane protein with kinase activity [Stigmatella aurantiaca DW4/3-1] gi|309391017|gb|ADO68476.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] Length = 560 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 91/223 (40%), Gaps = 4/223 (1%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62 + I FEGI+G+GKTT + + + L++ V RE G +P +E+ R Sbjct: 1 MLIVFEGIDGSGKTTLSNRVAQELRQAGLRVRHVREGGQLASPVSESLRRFTRDPANLAL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE +++AA ++ V RPAL I++ DRF ++ + + + Sbjct: 61 TPMAELLLYAAREAQLLDEVTRPALATHDIVITDRFFYTAEVLARWGRGLPETSVRPVLD 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-NRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD ++D+ I R + ++ + + + R + +A Sbjct: 121 ACARGLKPDLVFLIDVDPTIARARRKISKIITPKPGAPSRKGLAGAGLQVRLRAGYRTLA 180 Query: 182 RNQPDRCHIV-DSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 P R +V ++ + + T ++ + + + P + + Sbjct: 181 EESPGRWSLVENAGLPLEVLVTRLVQDILHVRGDQRLPAPASR 223 >gi|327310490|ref|YP_004337387.1| dTMP kinase [Thermoproteus uzoniensis 768-20] gi|326946969|gb|AEA12075.1| dTMP kinase [Thermoproteus uzoniensis 768-20] Length = 194 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 22/214 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLF++ EGI+G+GK+T I L++ L ++ T+EP P + L G Sbjct: 2 GLFVAIEGIDGSGKSTVIEELRKIL-----PIYATKEPSDGPIGRLIKSWALRGGTT--D 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A++FAA RLDH + I PAL EG++++ +R+++SS AYQG + + ++ I Sbjct: 55 PYVDALLFAADRLDHYQREIAPALGEGRVVVTERYVESSIAYQGAAG----VDIKFIELI 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD T++LD+ + + RV R S ++ +ER + + R I+L A Sbjct: 111 NARVPAPDITVLLDIEPEKAVARVSAR-----SGYVEKYER--LEFLKAVRSIYLRRAA- 162 Query: 184 QPDR-CHIVDSAHSFQSVATNILNIVWELVQKRV 216 +R ++++ +++A I ++ + Sbjct: 163 --ERGYVVLNAEEPPEAIARRIAEMIRAAANPAL 194 >gi|14285519|sp|Q9PFS7|KTHY_XYLFA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 208 Score = 169 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 17/217 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 1 MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGMLLRQ---SAATGRFSP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E V R HVE++I P + G +++ DR+ S AYQG L +D+L E + Sbjct: 58 EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEAN 113 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD ++LD+P IGL+R+ R S ++FE + + + R IFL + Sbjct: 114 AFAPRPDVLLLLDVPPAIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--EL 164 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 165 PSK-RVIDATANAETVLSAALALVMEVLRVRLGALGA 200 >gi|261403129|ref|YP_003247353.1| thymidylate kinase [Methanocaldococcus vulcanius M7] gi|261370122|gb|ACX72871.1| thymidylate kinase [Methanocaldococcus vulcanius M7] Length = 187 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 27/206 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI FEGI+G+GKTT L K+ + T EP + E R +L G + Sbjct: 1 MFIVFEGIDGSGKTTISKKLA-----KSINAFWTYEPSNSVVGELIRKIL--SGNVKVDD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++F+A R++H I+ L + ++CDR+L SS AYQ F+ S+ + Sbjct: 54 KTLALLFSADRIEH-NKKIKEEL-RYRDVVCDRYLYSSIAYQSVA-GVDEDFIRSINRYA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +L ++ LKR+ + D FE+K EK ++ +LD+A+ + Sbjct: 111 ---LKPDLVFLLICDIETALKRINTK---------DIFEKK--EFLEKVQEKYLDLAKKE 156 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVW 209 I+D+ + + V + + V Sbjct: 157 G--FVIIDTTDRTVEDVYSEVFKTVK 180 >gi|262199023|ref|YP_003270232.1| thymidylate kinase [Haliangium ochraceum DSM 14365] gi|262082370|gb|ACY18339.1| thymidylate kinase [Haliangium ochraceum DSM 14365] Length = 210 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 15/215 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GL I EGI+G+G +T LL + H T EP P R + L+ Sbjct: 4 HRGLLIVLEGIDGSGTSTQTRLLCDAFAARGRSTHATHEPSTGPVGLLLREM-LAGAHAP 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++++AA R DHV+ + PAL GK+++ DR+ SS AYQG + ++ +L Sbjct: 63 VDQTTLSLLYAADRADHVQREVEPALAAGKLVVSDRWYHSSLAYQGAGGT--RDWVAALN 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD TI L++ + + R + + F+R + I ++ + ++ Sbjct: 121 RYARA---PDLTIFLEVAAE-----IAARRRADDGRSEEIFDR--LEIQQRVAADYREVI 170 Query: 182 R--NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R ++D +V+ +I+ +V + + + Sbjct: 171 DSLRGRERIEVLDGERPLAAVSADIVRLVEDALAR 205 >gi|262198778|ref|YP_003269987.1| thymidylate kinase [Haliangium ochraceum DSM 14365] gi|262082125|gb|ACY18094.1| thymidylate kinase [Haliangium ochraceum DSM 14365] Length = 572 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 9/219 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62 +F+ FEGI+G+GKTT + + + L+R+ V RE G +P R Sbjct: 1 MFVVFEGIDGSGKTTVSNKVAKVLRRRGLAVEHVREGGEFASPLVGRMREFGKDPRNMAM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E + + A + I+PAL G ++ DR+L S + + + Sbjct: 61 APLTELLFYVARDAQLLAECIQPALRRGGLVFADRYLYSYEVLSHHGRGVPMDQVRPILD 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ-----NRYSLRESACLDYFERKDVMIHEKRRQIF 177 V PD + LD+ + R + + + + V + R + Sbjct: 121 AVSGGVWPDLVVYLDVEPTLARARRKVGKLIKKSKGGKPGGGSRKGLQGVGTQHRLRAGY 180 Query: 178 LDIARNQPDRCHIVDSA--HSFQSVATNILNIVWELVQK 214 L++A P+R +VD+A S +S I+ + +++ Sbjct: 181 LELAERDPERWLVVDNADVLSPESRLDAIVQRIAGAIER 219 >gi|297171025|gb|ADI22039.1| thymidylate kinase [uncultured myxobacterium HF0200_05J13] Length = 199 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 15/212 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EGI+G+G TT ++ + L ++ V T EP P R +L G + Sbjct: 1 MTKSQFIALEGIDGSGTTTQLTRIAEALTKRGRVVTQTMEPSRGPIGTRIRDIL--RGEE 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ A++FAA RLDH++ I PAL G+++L DR+L SS AYQ H+ L + Sbjct: 59 KTPPDSLALLFAADRLDHLQREIAPALQRGEVVLSDRYLISSLAYQSL-----HVELPFI 113 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-LD 179 + I+ + PD +I+L + + KR R E+ D D+ + EK Q + Sbjct: 114 EMINARARKPDVSILLKICPEEAAKRRATRGG--EAEIFD-----DLDLQEKISQAYDKA 166 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 AR+ IVD++ S V IL+ + L Sbjct: 167 FARSDLGPTAIVDASASMSDVTDAILSAIDSL 198 >gi|255994228|ref|ZP_05427363.1| dTMP kinase [Eubacterium saphenum ATCC 49989] gi|255993896|gb|EEU03985.1| dTMP kinase [Eubacterium saphenum ATCC 49989] Length = 138 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 5/138 (3%) Query: 1 MNS---GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MNS G FI+FEG++GAGK T I + +L + REPGGT +E R +LL Sbjct: 1 MNSDGFGKFITFEGLDGAGKGTQIDKVMEYLSDIGRAAILVREPGGTQLSEQIREMLL-Q 59 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +E ++F +AR + + VIRPAL GK ++CDR++DS+ AYQG + Sbjct: 60 NEFAISPMSELLLFLSARAELISKVIRPALESGKDVVCDRYMDSTIAYQGYGRGLLSEAI 119 Query: 118 DSLQEISVQEVMPDCTII 135 SL I+ ++PD T Sbjct: 120 -SLNNIATGFLVPDITFF 136 >gi|123438337|ref|XP_001309954.1| thymidylate kinase family protein [Trichomonas vaginalis G3] gi|121891703|gb|EAX97024.1| thymidylate kinase family protein [Trichomonas vaginalis G3] Length = 194 Score = 168 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 21/209 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG +G+GK+T LL V P T + L + Sbjct: 3 TRGKFILFEGCDGSGKSTQCKLLAN--SGLFPKVEQMCFPDRTTEIGQMINAYLKKSSNL 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA ++F A R + + I+ L G ++CDR+ S Y + + +D Sbjct: 61 VD-EAIHLLFTANRWE-LSPKIKELLNNGTTIICDRYYYSGVVYSAAKG----MDVDWCL 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD I +D+ ++ + R+ + +E+ K R++FL + Sbjct: 115 APEKGLPQPDLVIFIDISPEV--------QAKRKGFGEEIYEKT--EFQNKVRELFLSL- 163 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + DR I+D + V+ +I ++ E Sbjct: 164 --KDDRWRIIDGNQPLEKVSEDIQKVIKE 190 >gi|28199448|ref|NP_779762.1| thymidylate kinase [Xylella fastidiosa Temecula1] gi|32129653|sp|Q87B89|KTHY_XYLFT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|28057563|gb|AAO29411.1| thymidylate kinase [Xylella fastidiosa Temecula1] Length = 208 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 64/217 (29%), Positives = 107/217 (49%), Gaps = 17/217 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+GAGKTT L L+ + V++EP P R S F Sbjct: 1 MLVAIEGIDGAGKTTLARSLALKLRGVGLETVVSKEPTNGPWGTLLRQ---SAVTGRFSP 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E V R HVE++I P + G +++ DR+ S AYQG L +D+L E + Sbjct: 58 EEEVDVLLRDRRQHVEDLIVPMIGRGAVVILDRYFPSMVAYQGAAG----LPVDALLEAN 113 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 PD ++LD+P IGL+R+ R S ++FE + + + R IFL + Sbjct: 114 AFAPRPDVLLLLDVPPVIGLQRIWERGS-----TPNHFETTENL--SRCRDIFLAL--EL 164 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 P + ++D+ + ++V + L +V E+++ R+ L + Sbjct: 165 PSK-RVIDATANAETVFSAALGLVMEVLRVRLGALGA 200 >gi|321309545|ref|YP_004191874.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1] gi|319801389|emb|CBY92035.1| thymidylate kinase [Mycoplasma haemofelis str. Langford 1] Length = 220 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 61/218 (27%), Positives = 109/218 (50%), Gaps = 8/218 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLK--RFLQRKNYDVHVTREPGG--TPAAEAARHVLLSC 57 GLF+ FEGI+G+GKTT I LK + + ++ T EPGG R ++L Sbjct: 7 RRGLFVVFEGIDGSGKTTLIKALKGSKKISEAYREILFTYEPGGKDNTFGNKIRDLILRE 66 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G + +A++F A+R +H+E +I+PAL +++CDR+ S+ YQG+ D + ++ Sbjct: 67 GNS-LSEKTQALLFLASRSEHLEKIIQPALDREALIICDRYYLSTLVYQGKGDLDRINWI 125 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 Q+ PD T L+L + L R +N+ +E+ +D +D + K +I Sbjct: 126 RKNQDFITFR-KPDITFFLNLSWEEYLSRYKNKVESQENNWMDKLIYEDYLRMCKSYEI- 183 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + R ++D S ++ I +++ E+ R Sbjct: 184 -AMKEDISGRLILLDGGDSTNNLVKRIEDVLVEVANGR 220 >gi|225620556|ref|YP_002721813.1| thymidylate kinase [Brachyspira hyodysenteriae WA1] gi|254808280|sp|C0R1X1|KTHY_BRAHW RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|225215375|gb|ACN84109.1| thymidylate kinase [Brachyspira hyodysenteriae WA1] Length = 203 Score = 167 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 19/219 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EGI+G+GK++ +L L T EP R +LS Sbjct: 2 KGKLIVLEGIDGSGKSSIGMMLTDILNNIGIKSIYTFEPTHAYYGSKLRESMLSKD---L 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E E +F A R +H++++IRPA+ +G +++ DR++ SS AYQG + ++ +L + Sbjct: 59 TPEEELSLFIADRKEHIKHMIRPAINDGYVIVLDRYMHSSIAYQGAK-GIDKEYIYNLHK 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD IL L ++ L R+ + + +D FE K E+ +IF Sbjct: 118 DFI--LEPDLVFILHLNIETALNRI-----MEKRGFVDRFENKH--YLEEVDKIFSSF-- 166 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 N+P H +D++ +S+ ILN + E ++ PL S Sbjct: 167 NEP-YMHHIDASKDQKSICDEILNTIKE---SKILPLDS 201 >gi|159028337|emb|CAO87235.1| tmk [Microcystis aeruginosa PCC 7806] Length = 207 Score = 167 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 20/218 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58 FI FEGI+G+G +T LL+ + ++ ++ EP R + L+S Sbjct: 2 KPKFIVFEGIDGSGTSTQAKLLQEYFFKRGEKAVLSPEPSEGVIGRLIREIMQTNLISIQ 61 Query: 59 VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 A +FAA R H+ N V + E ++ R+ SS AY + Sbjct: 62 EQNQFDRQMAYLFAADRHYHLYNDHDGVFKLIHQEQTHVITTRYYFSSLAYNC----NNP 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +++++ PD I +D+ DI L R++NR A + +E+++ ++ K R Sbjct: 118 EEFAFVRQLNQHFPNPDIVIYIDVIPDISLARIKNR------AITEVYEKQEKLM--KVR 169 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q+F++I + D +D + + + NI+N + +L+ Sbjct: 170 QMFIEIFKEYKDNYLQLDGNDTIEHLHRNIINYLEQLI 207 >gi|298709115|emb|CBJ31061.1| conserved unknown protein [Ectocarpus siliculosus] Length = 228 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 24/231 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G FI FEG++ GKTT +LL L++ +D R P TP L + Sbjct: 13 KRGAFILFEGVDRCGKTTQANLLVESLKQAGHDACFMRFPDRTTPIGHMINGFLRN--TT 70 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F+A R + E+ IR L G ++CDR+ S A+ + + Sbjct: 71 DIDDRCVHLLFSANRWE-AESKIRELLKAGTTVVCDRYAYSGVAFSASKPGLS---VRWC 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ PD + LD+ V+ +KR + +E++ R FL + Sbjct: 127 KDPDRGLPAPDKILFLDISVEDAMKR--------GQFGEERYEKE--EFQRTVRATFLAL 176 Query: 181 ARNQPDR---CHIVDSAHSFQSVATNILNI----VWELVQKRVSPLSSKKD 224 ++D+ S+ I I V E+ K + L S+K+ Sbjct: 177 MEEDKASGVAWQLIDANREIGSIQDEIQKIGTSVVGEVEGKEIGSLWSRKE 227 >gi|15920677|ref|NP_376346.1| thymidylate kinase [Sulfolobus tokodaii str. 7] gi|23821799|sp|Q975E6|KTHY1_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|15621460|dbj|BAB65455.1| 190aa long hypothetical thymidylate kinase [Sulfolobus tokodaii str. 7] Length = 190 Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 23/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FISFEGI+GAGKTT + L++K Y+V +T+EP E + Sbjct: 3 RFISFEGIDGAGKTTLAKKVYEVLKKKGYNVILTQEPFTREITELIKK------AGWNDP 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++F+A R H++ ++ + +I+L DR+ S+ AYQ + ++E++ Sbjct: 57 VLLTLLFSADRAFHIKWIME---QKPEIVLMDRYFHSTIAYQSVLGLDE----KWIEEVN 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD +LD+ V+ +KR++ FE + + E R+ +L++AR Sbjct: 110 SKFPKPDIVFLLDIKVNEAIKRIRKDDQFN-------FE-EKIATLEAVRKKYLELARKY 161 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++D+ + + + I+ LV+ Sbjct: 162 --NFIVLDAMSKIEELTEKTVQIICSLVK 188 >gi|70606679|ref|YP_255549.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] gi|76363220|sp|Q4JAC4|KTHY_SULAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|68567327|gb|AAY80256.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] Length = 194 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 50/214 (23%), Positives = 99/214 (46%), Gaps = 27/214 (12%) Query: 5 LFI-SFEGIEGAGKTTHISLLKRFLQ---RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +FI SFEGI+G+GKTT ++ L N + +T EP + + Sbjct: 1 MFIISFEGIDGSGKTTISKIIYEKLLIEIGSNKKIILTSEPFSQEIIKLIEEI------G 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A++F A R H+ + + +I++ DR++DS+ AYQ + + + Sbjct: 55 WKDPISLALLFTADRAYHLNLLFK---QNPEIIIMDRYIDSTIAYQSSLGIDE----NWI 107 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLD 179 + ++ PD TI+LDL + + R++N+ +D F + + K R+ +L+ Sbjct: 108 RNLNKYFPEPDLTILLDLKPETAIARIKNK--------VDKFNFDEKISTLSKVREKYLE 159 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A+ ++ IV++ S + +IV+ + Sbjct: 160 LAKRN-NKIRIVNAEKSIDEIVEETWSIVYSFLN 192 >gi|124486152|ref|YP_001030768.1| thymidylate kinase [Methanocorpusculum labreanum Z] gi|166221753|sp|A2ST45|KTHY_METLZ RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|124363693|gb|ABN07501.1| thymidylate kinase [Methanocorpusculum labreanum Z] Length = 198 Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 20/211 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGK+T LK LQ + T+EPG A R + Sbjct: 1 MLITLEGIDGAGKSTLYEGLKTRLQD--LEPVFTKEPGSPLVNSAVRREI----GANRDP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----SQHLFLDSL 120 AEA +F A H+ V+ PAL E K+++ DR+ DS +AYQ +L ++ Sbjct: 55 FAEATLFVADHAAHLAQVVLPALEEKKLVISDRYSDSRFAYQQVSLIGIVPDPKAWLTAV 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD TI+L + + + R+ R ++FE D E+ ++ +L+ Sbjct: 115 H--AGWSVRPDLTILLLISPETAMNRLHERP------GKEHFE--DPAFLEEVQKKYLER 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 P+R ++D+A +++ + + L Sbjct: 165 VTEDPERFLLIDAAQEPETILDFVEKSIRAL 195 >gi|187736367|ref|YP_001878479.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835] gi|254808272|sp|B2UN87|KTHY_AKKM8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|187426419|gb|ACD05698.1| dTMP kinase [Akkermansia muciniphila ATCC BAA-835] Length = 206 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 17/207 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEGI+G GK+THI L+++L+ K +V + EP R S Sbjct: 7 RKGRLIVFEGIDGTGKSTHIGHLRKYLEEKELEVVQSFEPTRGRWGRMLRD---SAVTGR 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E E +F R +HV+ +I PAL G +L DR+ S AYQG R + + + Sbjct: 64 LSVEEEVALFLKDRREHVKMLIAPALARGAWVLLDRYYLSMMAYQGARGIDPEVIRAANE 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + +PD + LD+PV + L+R+ NR D FE + + R +F A Sbjct: 124 EFA---PVPDAVVWLDIPVSVALERIGNRGER------DAFETEAGL--AACRSVF---A 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +D+ + VA + + Sbjct: 170 SVHAPWMLRIDADAGKEEVAARVRKAL 196 >gi|303244545|ref|ZP_07330879.1| thymidylate kinase [Methanothermococcus okinawensis IH1] gi|302485093|gb|EFL48023.1| thymidylate kinase [Methanothermococcus okinawensis IH1] Length = 195 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 28/211 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI FEGI+G+GKTT LL + K T EP + R +L ++ Sbjct: 4 KFIVFEGIDGSGKTTQSKLLAEKINGK-----YTCEPTNGDIGKLIRDILSGKKCEK--- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E A++FAA R++HV + I L + ++CDR++ SS YQ Q + L+ + I+ Sbjct: 56 ETLALLFAADRVEHVVD-IEQHLKK-THIVCDRYVYSSMVYQA----IQGIDLNFIMNIN 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN- 183 PD I LD+ V+ KR+ + + FE K+++ K R + +I + Sbjct: 110 QFAKKPDILIFLDVDVEESFKRMNGKNK-------EIFENKEML--NKVRAKYYEIIKKR 160 Query: 184 --QPDR-CHIVDSA-HSFQSVATNILNIVWE 210 +P +++ S + V NIL + E Sbjct: 161 LFEPKYGYIKINTTGKSIEEVHDNILTELRE 191 >gi|261202488|ref|XP_002628458.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081] gi|239590555|gb|EEQ73136.1| thymidylate kinase [Ajellomyces dermatitidis SLH14081] gi|239612282|gb|EEQ89269.1| thymidylate kinase [Ajellomyces dermatitidis ER-3] Length = 232 Score = 166 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T ++L++ LQ ++V R P T + L G Sbjct: 11 QRGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTH 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + I+ + G ++ DR+ S Y +D L LD Sbjct: 70 LDDHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKD-IPGLSLDWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 + + PD + L++ + KR L+ +E + + RQ+F + Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGLERYE--NDTFQSRIRQLFQTLI 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 AR PD HI+D+ + + VA +++ + V+ Sbjct: 178 AREDPDNVHIIDAGRTEREVALDVIETARKAVE 210 >gi|319411558|emb|CBQ73602.1| related to thymidylate kinase [Sporisorium reilianum] Length = 1229 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 24/213 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG++ AGK+T + L + L K + P T A + L+ + Sbjct: 429 KRGFFIVVEGLDRAGKSTQVERLAQHLHAK-----AIKFPERTTAIGQMINSYLAQ-TSD 482 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A ++F+A R + V + I+ L G+ ++CDR+ S AY + S D + Sbjct: 483 LDDQAIHLLFSANRWECVAS-IKKTLDAGESIVCDRYAFSGIAYSVAKGLSY----DWCR 537 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V +PD T+ LDL + R + +E+ + K R F ++ Sbjct: 538 NPDVGLPLPDLTMFLDLDAETAAAR--------GGYGEERYEK--LDFQAKVRDAFTRVS 587 Query: 182 ---RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R R +D++ + V +I V + Sbjct: 588 QDVRAHGGRWVTIDASKTLDQVTDDIQKAVQRV 620 >gi|321452944|gb|EFX64236.1| hypothetical protein DAPPUDRAFT_231894 [Daphnia pulex] Length = 209 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 98/225 (43%), Gaps = 19/225 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G I EG + +GKTT R+LQ N + H+ R P + + + L C + Sbjct: 2 IKRGALIVLEGCDRSGKTTLCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTE 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F+A R + + + I+ L +G ++ DR+ S A+ + ++ L Sbjct: 62 -LDDYAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSAAK---PNMDLRWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q+ + PD I LD+ R + +E ++ + + R +L + Sbjct: 117 QQSDSGLLKPDLVIFLDIDPVEAQTR--------GQYGSERYE--NLEMQKVVRSNYLKL 166 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 Q + +VD++ S + V ++ +V E + ++P S+ K + Sbjct: 167 ---QDESWKVVDASRSMEEVGRDVCRLVQEAL-DNITPDSALKQL 207 >gi|321455804|gb|EFX66927.1| hypothetical protein DAPPUDRAFT_331571 [Daphnia pulex] Length = 212 Score = 165 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 19/221 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G I EG + +GKTT R+LQ N + H+ R P + + + L C + Sbjct: 2 IKRGALIVLEGCDRSGKTTQCQKAIRWLQESNKEAHLMRFPDRSTIIGSLINKYLECSTE 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F+A R + + + I+ L +G ++ DR+ S A+ + ++ L Sbjct: 62 -LDDHAIHLLFSANRWELLPD-IKKLLQKGTNVIVDRYSYSGIAFSASK---PNMDLRWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q+ + PD I LD+ R + +E ++ + + R +L + Sbjct: 117 QQSDSGLLKPDLVIFLDINPVEAQTR--------GQYGSERYE--NLEMQKIVRSNYLKL 166 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 Q + +VD++ S + V ++ +V E + ++P S+ Sbjct: 167 ---QDESWRVVDASRSMEEVWRDVCRLVQEAL-DNITPDSA 203 >gi|258545273|ref|ZP_05705507.1| dTMP kinase [Cardiobacterium hominis ATCC 15826] gi|258519486|gb|EEV88345.1| dTMP kinase [Cardiobacterium hominis ATCC 15826] Length = 205 Score = 165 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 8/211 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG FI+ +G EG GK+T ++ ++ + REPGGTP E R +LL D Sbjct: 2 SGRFITLDGSEGVGKSTQLANIQAWCTAHGITARYGREPGGTPLGERLRAILLDRTTDA- 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ AAR H++ I PAL G+ + DR+ D++YAYQ S L +L+ Sbjct: 61 DPLTELLLLLAARRAHLQQTILPALARGEWYISDRYRDATYAYQHYGRSIPLTTLSALET 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 S + PD +IL D R+ R A D FE +D + + + A+ Sbjct: 121 ASETDRDPDLALILGSSADTARDRLAQR-----GAAQDRFEAEDADFFVRVAAGYRERAQ 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +D+ Q+V I + L Q Sbjct: 176 APHAVW--IDAEGDEQTVFARIRPHLEALRQ 204 >gi|255536995|ref|XP_002509564.1| thymidylate kinase, putative [Ricinus communis] gi|223549463|gb|EEF50951.1| thymidylate kinase, putative [Ricinus communis] Length = 264 Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 21/221 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI EG++ +GKT+ L +L+R ++ + R P T LS + Sbjct: 57 SRGAFIVLEGLDRSGKTSQCGKLVSYLERLGHETELWRFPDRTTTIGQMISAYLS-NQSQ 115 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++++A R + +++ L G L+ DR+ S A+ + L + + Sbjct: 116 LDDRTIHLLYSANRWE-KNSLMETKLKSGTTLIVDRYSYSGVAFSAAKG----LDFEWCK 170 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD + LD+P + +R + +E+ + K + + Sbjct: 171 APEIGLLAPDLVLYLDIPPEKAAER--------GGYGGERYEK--LEFQMKVGNCYQTLR 220 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE--LVQKRVSPLS 220 + I+D++ + V I IV + L ++ PLS Sbjct: 221 DSS---WEIIDASQPMEEVQKQIQEIVLDHVLASEKGKPLS 258 >gi|327353237|gb|EGE82094.1| thymidylate kinase [Ajellomyces dermatitidis ATCC 18188] Length = 225 Score = 164 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T ++L++ LQ ++V R P T + L G Sbjct: 4 RGGALIVVEGLDRAGKSTQCAILQKTLQEDGHEVKYRRFPDRTTEIGKMINAYL-MGNTH 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + I+ + G ++ DR+ S Y +D L LD Sbjct: 63 LDDHAIHLLFSANRWEAATE-IQQDISNGITVIIDRYSYSGVVYSAAKD-IPELSLDWAW 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 + + PD + L++ + KR L+ +E + + RQ+F + Sbjct: 121 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGLERYE--NDTFQSRIRQLFQTLI 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 AR PD HI+D+ + + VA +++ + V+ Sbjct: 171 AREDPDNVHIIDAGRTEREVALDVIETARKAVE 203 >gi|156096007|ref|XP_001614038.1| thymidylate kinase [Plasmodium vivax SaI-1] gi|148802912|gb|EDL44311.1| thymidylate kinase, putative [Plasmodium vivax] Length = 219 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 19/211 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G FI FEG++ +GK+T LL L+RKN +V H+ TP + L Sbjct: 14 KKGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLKMQS-- 71 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++F+A R + + I+ L G ++CDR+ S AY Sbjct: 72 DMTNETIHLLFSANRWELMGE-IKRLLASGVWVVCDRYAYSGVAYSAGALKLSKT---WC 127 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD L++P + R + +E+ V + ++ + + + Sbjct: 128 MNPDQGLIKPDVVFYLNVPPNYAQNR--------SEYGEEIYEK--VEVQKRIYETYKNF 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ D +D + + +++N + +L Sbjct: 178 SQE--DYWINLDGTKNIDDIHQDVINEITKL 206 >gi|221062039|ref|XP_002262589.1| thymidylate kinase [Plasmodium knowlesi strain H] gi|193811739|emb|CAQ42467.1| thymidylate kinase, putative [Plasmodium knowlesi strain H] Length = 219 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 19/211 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G FI FEG++ +GK+T LL L+RKN +V H+ TP + L + Sbjct: 14 KKGKFIVFEGLDRSGKSTQSKLLVEHLRRKNVEVNHLCFPNRETPTGQIIAKYLK--MQN 71 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E ++F+A R + + I+ L +G ++CDR+ S AY Sbjct: 72 DMTNETIHLLFSANRWELMGE-IKRLLSKGVWVVCDRYAYSGVAYSSGALKLSKT---WC 127 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD L++P + +R + +E+ V + ++ + + + Sbjct: 128 MNPDQGLIKPDVVFYLNVPPNYAQQR--------SEYGEEIYEK--VEVQKRIYEAYKNF 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ D +D + + +++N + +L Sbjct: 178 SQE--DYWINLDGTKNINDIHQDVVNEITKL 206 >gi|67902452|ref|XP_681482.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4] gi|40739679|gb|EAA58869.1| hypothetical protein AN8213.2 [Aspergillus nidulans FGSC A4] Length = 227 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 91/233 (39%), Gaps = 26/233 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GV 59 G I EG++ AGK++ L LQ V R PG + A R L+ G Sbjct: 10 RGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPGDSSFARTLRRKLIDGYLRGQ 69 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + ++F+A R + V I + G ++ DR+ S Y + ++ L L+ Sbjct: 70 SHLDDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEW 127 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF-- 177 + V PD + L + + KR + +E + + + R++F Sbjct: 128 AWQPEVGLPKPDLCLFLSISPEEAAKR--------GGFGGERYENE--AMQTRVRELFNT 177 Query: 178 ---LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLSSKKDI 225 L A + I+D+ S V+ +ILN+V E + SPL I Sbjct: 178 IFDLQRATD----IRIIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 226 >gi|70984984|ref|XP_747998.1| thymidylate kinase [Aspergillus fumigatus Af293] gi|66845626|gb|EAL85960.1| thymidylate kinase [Aspergillus fumigatus Af293] gi|159126077|gb|EDP51193.1| thymidylate kinase [Aspergillus fumigatus A1163] Length = 221 Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 17/226 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G I FEG++ AGK++ L+ LQ + V R P TP + L G Sbjct: 6 NRGALIVFEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + + I + G ++ DR+ S Y + + +L L+ Sbjct: 64 QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNPNLSLEWA 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD + L + + KR ++ +E + + + R++F + Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAKR--------GGFGVERYENETM--QNRVRELFQTL 171 Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 Q D H +D+ SF +V+ +I+ IV + + R+ + K + Sbjct: 172 FDLQQGDYIHTIDAGRSFDAVSQDIMKIVTDYI-GRLDAMGPLKRL 216 >gi|82492135|gb|ABB77932.1| thymidylate kinase [Environmental halophage 1 AAJ-2005] Length = 192 Score = 163 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 20/194 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EG++ +GKTT + L+ + D TREP T S + Sbjct: 1 MLVTLEGLDESGKTT----VTEALRSQFPDATYTREPTETWNGSVVNK---SVETEHEEP 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEI 123 AE ++ A H+ IRPAL +GK+++ DR+ DS AYQG + ++ ++ I Sbjct: 54 VAELFMYTADHATHLSETIRPALNQGKLVISDRYTDSRCAYQGATLEDEFAHPMEYIRGI 113 Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD T+ LD+ + R + + +D K R+ + + Sbjct: 114 HGEFTREPDLTLYLDIDAETAASREKA------AKGVDR-----TEYLSKVRENYERLIA 162 Query: 183 NQPDRCHIVDSAHS 196 PDR +D+ S Sbjct: 163 THPDRFVRIDATQS 176 >gi|313246105|emb|CBY35059.1| unnamed protein product [Oikopleura dioica] Length = 212 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 22/229 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59 M G I FEG++ +GK+T I + + K +VH+TR P T + L S Sbjct: 1 MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSS-- 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ +A ++F+A R +H I + G +L DR+ S A+ + L L+ Sbjct: 59 NDLSDQAIHLLFSANRWEH-AQSILNYMNNGTSVLVDRYAFSGVAFTAAKG----LDLEW 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD + LD+ + KR + +E+ V + R+++ Sbjct: 114 CKNPDRGLPKPDLVLQLDVDEETAKKR--------GGFGEERYEK--VEFQRQVRKLYSQ 163 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224 + D I+D++ S + + V E ++ K + L KKD Sbjct: 164 LREEHSDIWKIIDASGSVDELTPALQTHVDETIKSCQNKDIEKLWIKKD 212 >gi|154308900|ref|XP_001553785.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10] gi|150852604|gb|EDN27796.1| hypothetical protein BC1G_07978 [Botryotinia fuckeliana B05.10] Length = 242 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 55/225 (24%), Positives = 93/225 (41%), Gaps = 24/225 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59 ++ G FI EG++ AGKTT + L L +V + R P T + L S Sbjct: 18 ISRGSFILIEGLDRAGKTTQVKKLCDKLYASGRNVKLMRFPDRTTAIGQQINSYLQSS-- 75 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 ++ ++F+A R + + IR + +G ++CDR+ S Y + DS HL Sbjct: 76 TALPDQSIHLLFSANRWEKAQE-IRDLIAQGYTIVCDRYYYSGMIYTSSKYSIDSPNHLS 134 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+ + + MPD I LDL + KR + +E + + + R Sbjct: 135 LEWCKNPEIGLPMPDRVIFLDLEPEEAEKR--------GGYGDEKYETR--EMQRRVRNG 184 Query: 177 FLDIAR------NQPDRC-HIVDSAHSFQSVATNILNIVWELVQK 214 FL + Q R +D+ VA I + V ++V++ Sbjct: 185 FLSLQNSAVPGFEQEQRIMKAIDAGDGLDEVAEKIWHAVKDIVEQ 229 >gi|150400777|ref|YP_001324543.1| dTMP kinase [Methanococcus aeolicus Nankai-3] gi|166221752|sp|A6UTV9|KTHY_META3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|150013480|gb|ABR55931.1| dTMP kinase [Methanococcus aeolicus Nankai-3] Length = 196 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 29/215 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI FEGI+G+GKTT LL +L T EP + R VL G Sbjct: 1 MNK--FIVFEGIDGSGKTTQAKLLADYLNG-----IYTCEPTNGEIGQLIRKVL---GGK 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+ A++FA R++H++ + + +++CDR++ SS YQ F+ S+ Sbjct: 51 NCEKESLALLFAGDRVEHIKEIEHKLIEN--MVICDRYVYSSMVYQSI-QGIDIDFIASI 107 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +PD I LD+ ++ LKR+ +R S + FE K+++ +K + +++I Sbjct: 108 NRFAK---IPDVLIYLDVSIEESLKRMGDRDSK------EIFENKEIL--QKVNKKYMNI 156 Query: 181 ARN---QPDR-CHIVDS-AHSFQSVATNILNIVWE 210 +P ++++ + + V I+ + + Sbjct: 157 INERLFEPKNGYILINTDNKTVEEVHKEIIKKLMD 191 >gi|313229292|emb|CBY23878.1| unnamed protein product [Oikopleura dioica] Length = 212 Score = 162 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 53/228 (23%), Positives = 94/228 (41%), Gaps = 20/228 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG++ +GK+T I + + K +VH+TR P T + L D Sbjct: 1 MARGALIIFEGVDRSGKSTQIKRIFNQMVNKGENVHLTRFPERTSEIGQTINGYLKSSND 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +A ++F+A R +H I + G +L DR+ S A+ + L L+ Sbjct: 61 -LSDQAIHLLFSANRWEH-AQSILNYMNNGTSVLVDRYAFSGVAFTAAKG----LDLEWC 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD + LD+ + KR + +E+ V + R+++ + Sbjct: 115 KNPDRGLPKPDLVLQLDVDEETAKKR--------GGFGEERYEK--VEFQRQVRKLYSQL 164 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKKD 224 D I+D++ S + + N V E ++ K + L K+D Sbjct: 165 REEHSDIWKIIDASASVDELTPALQNHVDETIKSCQNKDIEKLWIKRD 212 >gi|242792112|ref|XP_002481887.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500] gi|218718475|gb|EED17895.1| thymidylate kinase [Talaromyces stipitatus ATCC 10500] Length = 238 Score = 162 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 93/229 (40%), Gaps = 24/229 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G + EG++ AGK++ LL + L NY R P TP + L G Sbjct: 11 KRGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYL--RGQS 68 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + + I + G ++ DR+ S Y + + +L L Sbjct: 69 QLDDHSIHLLFSANRWE-LAQSIHEYIANGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWA 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD + L + + KR ++ +E + ++ R++FL + Sbjct: 127 WQPEVGLPRPDLCLFLSISPEEAAKR--------GGYGVERYE--TDSMQKRVRELFLSL 176 Query: 181 ARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220 D ++D+ S VA +IL+ V E ++ K++ P + Sbjct: 177 LDLPHNDEICVIDAGQSVDEVAQDILDPVLECMKNVDSIGPLKKLGPWT 225 >gi|240277647|gb|EER41155.1| thymidylate kinase [Ajellomyces capsulatus H143] gi|325093734|gb|EGC47044.1| thymidylate kinase [Ajellomyces capsulatus H88] Length = 232 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 93/214 (43%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T + L++ LQ + ++V R P T + L + Sbjct: 11 QRGALIVLEGLDRAGKSTQCASLQKTLQEEGHEVKYRRFPDRTTEIGKLINAYL-MQNAQ 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + I+ + G ++ DR+ S Y + + L L+ Sbjct: 70 LDDHSIHLLFSANRWEAAAE-IQRDISNGITVIIDRYSYSGAVYSAAK-NIPGLSLEWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 + + PD + L++ + KR ++ +E + + RQ+F ++ Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGMERYE--NDAFQTRIRQLFQELV 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 AR P+ H+VD++ + VA +++ +++ Sbjct: 178 AREDPNNVHVVDASRAESEVALDVIRAARRAIEE 211 >gi|29135124|ref|NP_803754.1| ORF188 [Pseudomonas phage phiKZ] gi|18996653|gb|AAL83089.1|AF399011_188 PHIKZ188 [Pseudomonas phage phiKZ] Length = 352 Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 73/228 (32%), Positives = 114/228 (50%), Gaps = 16/228 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--G 58 MN GLF+ EG EG GKTT ++ L+++NYDV REPGGT +E R +L+ Sbjct: 1 MN-GLFVCIEGTEGVGKTTVTKMVVEELRKRNYDVVAMREPGGTATSEKIRQMLIWPEFK 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-----YQGERDSSQ 113 + E + ++ +A R+ +VEN+IRPAL + KI++ +RF+ S+YA ++ Sbjct: 60 DEVRPPEFDVLMHSAGRMLNVENIIRPALKDDKIVITERFIASTYALNVVPFEETNPYLS 119 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LF+D LQ P T L P ++ KR++ R LDY+E K K Sbjct: 120 KLFMDILQGTLHSIPEP-ATFFLTAPEEVRKKRIEMRD-----RGLDYYESKGSSYFNKV 173 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + + + NQP +VD+ + I+ + L K+ + SS Sbjct: 174 DEGYGRLI-NQPSSI-VVDTNRDLDIIVNEIVESIIFLRDKQKNKQSS 219 >gi|121718363|ref|XP_001276187.1| thymidylate kinase [Aspergillus clavatus NRRL 1] gi|119404385|gb|EAW14761.1| thymidylate kinase [Aspergillus clavatus NRRL 1] Length = 221 Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 96/229 (41%), Gaps = 24/229 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ AGK++ L+ LQ Y V R P TP + L G Sbjct: 6 KRGALIVVEGLDRAGKSSQCERLRDSLQASGYSVKYIRFPDRTTPIGQLINGYL--QGQS 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F+A R + + I + G ++ DR+ S Y + +Q+L L+ Sbjct: 64 HLDDHSIHLLFSANRWE-IARTIENDIANGVTVIVDRYSYSGAVYSAAK-GNQNLSLEWA 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD + L + + KR ++ +E + + + R++F + Sbjct: 122 WQPEIGLPQPDICLFLRISPEEAAKR--------GGFGIERYENEKM--QSRVRELFQTL 171 Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220 + Q D H+VD+ + +V+ +IL V ++ KR+ P++ Sbjct: 172 FKLQLGDYIHMVDAGRTLDAVSQDILQTVTACLETIDATAPLKRLGPIA 220 >gi|284175009|ref|ZP_06388978.1| dTMP kinase [Sulfolobus solfataricus 98/2] gi|261602452|gb|ACX92055.1| thymidylate kinase [Sulfolobus solfataricus 98/2] Length = 189 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 26/208 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I+ EGI+G+GKTT +LLK +L+ K +V VTREP + + Sbjct: 3 KLIAIEGIDGSGKTTLANLLKEYLESKMKLNVIVTREPFSEDIIKLIEKI------GWND 56 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++FAA R HV + + + +++ DR+ SS AYQG + ++ + Sbjct: 57 PILLVLLFAADRALHVNWLSK--IRNADLIILDRYYFSSIAYQGALGVDE----KWIKTV 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLDIAR 182 + PD I+LDLP+++ + R++N D F + + K R+ +L +A+ Sbjct: 111 NSYFPKPDMVILLDLPIEVAISRIKN----------DKFNFEEKIKSLAKVREKYLKLAK 160 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +IVD+ V + I+ + Sbjct: 161 EY--NFYIVDANKDKNEVLEQTIKIIQK 186 >gi|149923263|ref|ZP_01911673.1| thymidylate kinase [Plesiocystis pacifica SIR-1] gi|149815860|gb|EDM75380.1| thymidylate kinase [Plesiocystis pacifica SIR-1] Length = 210 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 14/213 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62 F+ FEGI+G+G TT + + L+ + + V TR+P P R +L Sbjct: 7 RFLVFEGIDGSGTTTQLRRVSEALRERGHRVVETRQPSPGPIGALTRELLAVDGGKARTV 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E A++FAA RL+H+ V+ PAL EG ++LCDR++ SS+ YQ ++ Sbjct: 67 GPEGLALMFAADRLEHLARVVEPALSEGAVVLCDRYVVSSWVYQSL-----DCDRAWVRT 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ PD T + DL +I L ++ F+ + + + Sbjct: 122 INTHARWPDRTYVFDLDPEIALA-RVAARRAETGQVVERFD--VPDTQRRLAAGYRAVLD 178 Query: 183 NQPDRCHI-VDSAHSFQSVATNILNIVWELVQK 214 + VD+A S +V T I V +L+ + Sbjct: 179 EADLSGLVAVDAAASIDAVTTAI---VEDLLAQ 208 >gi|156044845|ref|XP_001588978.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980] gi|154694006|gb|EDN93744.1| hypothetical protein SS1G_09611 [Sclerotinia sclerotiorum 1980 UF-70] Length = 242 Score = 161 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 24/225 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 ++ G FI EG++ AGKTT + L L +V + R P T + L S + Sbjct: 18 LSRGSFILIEGLDRAGKTTQVRKLCDRLYASGRNVKLMRFPDRTTSIGQQINSYLQSSTI 77 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 +A ++F+A R + + I + +G ++CDR+ S Y + DS HL Sbjct: 78 --LPDQAIHLLFSANRWEKAQE-IHQFIAQGYTIVCDRYYYSGMIYTSSKYPTDSPNHLS 134 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+ + + MPD I LDL + KR + +E + + + R Sbjct: 135 LEWCKNPEIGLPMPDKVIFLDLEPEEAEKR--------GGYGDEKYETR--EMQRRVRDG 184 Query: 177 FLDIARN-----QPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214 FL + + +R +++ VA I + V LV++ Sbjct: 185 FLRLQNTAIKGFEHERSIMKAINAGSGVDEVAEKIWDTVVTLVEQ 229 >gi|16331301|ref|NP_442029.1| hypothetical protein slr0379 [Synechocystis sp. PCC 6803] gi|1001473|dbj|BAA10099.1| slr0379 [Synechocystis sp. PCC 6803] Length = 236 Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 13/215 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDE 61 LFI EGI+G+GKTT LL QR+ ++ EP P R L L D Sbjct: 28 LFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYNDA 87 Query: 62 FGAEAEA-IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 EA+ +FAA R H+ + + L + ++ R+ SS AY Sbjct: 88 RQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCH----TEADW 143 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + +Q ++ PD I LDLPVD+ L+R+ +R L + A + +E+++ +I + + Sbjct: 144 EFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLI--SVHRNY 201 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I + + +D++ + + I+ V E++ Sbjct: 202 DRIFAHYQGQLCRLDASLPVEQLHQAIITKVEEML 236 >gi|15897682|ref|NP_342287.1| thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2] gi|227830328|ref|YP_002832108.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|229579145|ref|YP_002837543.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|229582100|ref|YP_002840499.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] gi|284997753|ref|YP_003419520.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] gi|11133144|sp|Q9UXG7|KTHY1_SULSO RecName: Full=Probable thymidylate kinase 1; AltName: Full=dTMP kinase 1 gi|6015696|emb|CAB57523.1| thymidylate kinase [Sulfolobus solfataricus P2] gi|13813955|gb|AAK41077.1| Thymidylate kinase (tmK-1) [Sulfolobus solfataricus P2] gi|227456776|gb|ACP35463.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|228009859|gb|ACP45621.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|228012816|gb|ACP48577.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] gi|284445648|gb|ADB87150.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] Length = 189 Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 26/208 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I+ EGI+G+GKTT +LLK L+ K +V VTREP + + Sbjct: 3 KLIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREPFSEDIIKLIEKI------GWND 56 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++FAA R HV + + + + +++ DR+ SS AYQG + ++ + Sbjct: 57 PILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQ----WIKMV 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLDIAR 182 + PD I+LDLP+++ + R++N D F + + K R+ +L +A+ Sbjct: 111 NSYFPKPDMVILLDLPIEVAISRIKN----------DKFNFEEKIKSLAKVREKYLKLAK 160 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++VD++ V + I+ + Sbjct: 161 EY--NFYVVDASKDKNEVLEQAIKIIQK 186 >gi|225557103|gb|EEH05390.1| thymidylate kinase [Ajellomyces capsulatus G186AR] Length = 232 Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T + L++ LQ + ++V R P T + L + Sbjct: 11 QRGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLINAYL-MQNAQ 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + I+ + G ++ DR+ S Y + + L L+ Sbjct: 70 LDDHSIHLLFSANRWEAAAE-IQRDISNGITVIIDRYSYSGAVYSAAK-NIPGLSLEWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 + + PD + L++ + KR ++ +E + + RQ+F ++ Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGMERYE--NDAFQTRIRQLFQELV 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 AR P+ H+VD+ + VA +++ +++ Sbjct: 178 AREDPNNVHVVDAGRAESEVALDVIRAARRAIEE 211 >gi|310799971|gb|EFQ34864.1| thymidylate kinase [Glomerella graminicola M1.001] Length = 271 Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 91/231 (39%), Gaps = 33/231 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI+FEG++ +GKTT + LL++ V V R P T L V+ Sbjct: 39 RGAFIAFEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRTTPIGQMIDAYLKSSVE-M 97 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + V+N I+ L G ++CDR+ S Y + + HL L ++ Sbjct: 98 EDHVIHLLFSANRWEAVKN-IQTLLASGTTVICDRYYHSGIVYSAAKQN-PHLTLHWARQ 155 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA- 181 + PD + LDL I +R + +E+ + R +F ++ Sbjct: 156 PELGLPRPDLVLFLDLEEAIARER--------GGWGDEVYEK--AEFQRRVRDLFWGLSL 205 Query: 182 -------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R + + +VD+ S + VA I V V+ Sbjct: 206 GRVGPDGGLGEKGRVDREFRQEEEDLVVVDAGASVEEVAEEIWRKVGPRVE 256 >gi|70607738|ref|YP_256608.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] gi|68568386|gb|AAY81315.1| thymidylate kinase [Sulfolobus acidocaldarius DSM 639] Length = 213 Score = 161 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 17/219 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I+FEGI+G+GK++ SLLK +L ++ Y T + + + Sbjct: 2 KGILIAFEGIDGSGKSSQASLLKSWLSKRRYTFI-TEWNSSEWIHDIIKEA---KKKNLL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ A D E I P L G +++ DR++ ++YA RDS + + ++ +++ Sbjct: 58 TPLTFSLIHATDFADRYEKYILPMLKCGFVVIADRYIYTAYA----RDSVRGVDIEWVKK 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDYF-----ERKDVMIHEKRRQ 175 + V PD T + +P ++ LKR+++ R A D F E + + Sbjct: 114 LYSFAVKPDITFYIRVPSEVALKRLKSSRRQIKPTEAGADVFPNLTPEEGFIKYQSSIIE 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ IA + +VD + V + I V EL ++ Sbjct: 174 VYDRIAEE--NNFVVVDGTKDPRQVQSEIRGKVMELWRR 210 >gi|167957240|ref|ZP_02544314.1| thymidylate kinase [candidate division TM7 single-cell isolate TM7c] Length = 208 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 89/214 (41%), Gaps = 10/214 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G +I EG +G GK+T I LLK+FL +K + EPG T R ++ + + Sbjct: 2 RGKYIVIEGSDGTGKSTQIDLLKKFLNKKGFISKTIHEPGETAIGIELRKIIKNKNLPR- 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++F AAR + + +I L +G+ ++ R S+ YQG + + + Sbjct: 61 SARTNLLLFTAARCE-LAPIIENHLNKGEWVISSRNWLSTVVYQGYGEGIDINEIKQITA 119 Query: 123 ISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + D T++L D R+ NR + D FE K K + + I Sbjct: 120 LFTNKSYLQTDLTLVLYANTDTLRSRIINRND---KSYRDTFESKPDNFQCKLNKGYQKI 176 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQ 213 + +++ + V I+ + ++ Sbjct: 177 IADF--NLPAINTNDKTIDEVHNEIVKHISNILN 208 >gi|320537300|ref|ZP_08037256.1| thymidylate kinase [Treponema phagedenis F0421] gi|320145870|gb|EFW37530.1| thymidylate kinase [Treponema phagedenis F0421] Length = 214 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 54/215 (25%), Positives = 83/215 (38%), Gaps = 23/215 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI FEGI+G G T+ + LL+ V T+EP T + R L Sbjct: 11 FIVFEGIDGTGTTSQLRLLRERFASIGKAEKVVFTQEPTDTEIGKLIRKAL--SKELSLE 68 Query: 64 AEAEAIVFAAARLDHVEN--VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A +FAA R +H+ I GK + DR+ SS AYQG + Sbjct: 69 QKTIAQLFAADRTEHIYGNAGIIEHTANGKAVFSDRYFFSSLAYQGLSVGKSLA-----K 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ +P+ D+PV + R+ R +E +E+KD RQ +L I Sbjct: 124 KLNEDFPLPELLFFFDIPVQTSMSRIDKRGLQKEI-----YEKKD--FQTAVRQEYLRII 176 Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWEL 211 +D+ Q + I + V L Sbjct: 177 EEYEKSAPEMQIIRIDAEKDIQEIHQKIWSFVENL 211 >gi|213419385|ref|ZP_03352451.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 133 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 7/140 (5%) Query: 78 HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD 137 VE VI+PAL +G ++ DR S+ AYQG L +L++ + + PD T+ LD Sbjct: 1 LVETVIKPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLD 60 Query: 138 LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF 197 + ++GLKR + R LD E++ + R +L++A R +D+ Sbjct: 61 VTPEVGLKRARARGD------LDRIEQESFDFFNRTRARYLELAAQD-SRIRTIDATQPL 113 Query: 198 QSVATNILNIVWELVQKRVS 217 +V +I V + VQ++ + Sbjct: 114 DAVMRDIRATVTKWVQEQAA 133 >gi|223985441|ref|ZP_03635501.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM 12042] gi|223962584|gb|EEF67036.1| hypothetical protein HOLDEFILI_02807 [Holdemania filiformis DSM 12042] Length = 143 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 6/148 (4%) Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 +++AAAR H+ + PAL GK+++CDRF+DSS AYQG + + S+ E +++ Sbjct: 1 MLYAAARRQHLIEKVLPALEAGKVVICDRFVDSSLAYQGFGRNLGIEEVLSINEFAIEGH 60 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD T+ LDL GL R+ R + D +++ + H + + + + +R Sbjct: 61 WPDKTLYLDLAPQQGLDRIATRQNK------DRLDQEKIDFHLRVCEGYRQVRDRFAERM 114 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216 ++D+A V + + + L+ + V Sbjct: 115 IVIDAAQPVDQVIADCVKAIGALIHREV 142 >gi|295666950|ref|XP_002794025.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01] gi|226277678|gb|EEH33244.1| thymidylate kinase [Paracoccidioides brasiliensis Pb01] Length = 232 Score = 160 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 16/223 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T +LL++ LQ++ ++V R P T A + L G Sbjct: 11 QRGALIVVEGLDRAGKSTQCALLQKTLQQEGHEVKYRRFPNRTTAIGKLINAYL-VGDSH 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + + IR + G ++ DR+ S Y +D L LD Sbjct: 70 LDDHSIHLLFSANRWEAAKE-IRKDISNGISIIIDRYSYSGAVYSAAKD-VPGLSLDWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-I 180 + + PD + L++ + +R L+ +E + ++ + RQ+F I Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAARR--------GGYGLERYE--NDILQARVRQLFQTFI 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221 R P+ ++++ S VA +IL+ + ++K + PL S Sbjct: 178 EREDPENVCVINAGRSEVDVAQDILSEARKAIKKIQAIGPLRS 220 >gi|46130830|ref|XP_389146.1| hypothetical protein FG08970.1 [Gibberella zeae PH-1] Length = 270 Score = 160 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 55/233 (23%), Positives = 92/233 (39%), Gaps = 34/233 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G FI EG++ +GKTT + LL++ + V V R P TP + + L S Sbjct: 22 NRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVKVMRFPDRTTPIGQMIDNYLKS--NV 79 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+A R + V+ I+ L G +LCDR+ S Y + + L L Sbjct: 80 EMDDHVIHLLFSANRWEAVKQ-IQSLLASGTTILCDRYYHSGIVYSAAKQN-PSLTLPWA 137 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--- 177 + PD + LDL + R + +ER + ++ R++F Sbjct: 138 RAPERGLPRPDLVLFLDLTEEQAQAR--------GGWGGEVYERSGM--QKRVRELFWGL 187 Query: 178 ----LDIAR------------NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 DIA + + +VD+ S + V + V V++ Sbjct: 188 SMGGKDIAAQGLGLDEGEGWTQEEEDLVVVDAGGSVEEVNEEVWKKVRARVEQ 240 >gi|312136656|ref|YP_004003993.1| thymidylate kinase [Methanothermus fervidus DSM 2088] gi|311224375|gb|ADP77231.1| thymidylate kinase [Methanothermus fervidus DSM 2088] Length = 196 Score = 160 bits (407), Expect = 8e-38, Method: Composition-based stats. Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 24/219 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+FEGI+G+GKTT + +L+R Y V P + A+ +L G ++ Sbjct: 1 MYIAFEGIDGSGKTTICKYISSYLRRNGYKVLTVGFPSNNEIGKLAKKMLK--GEIKWNE 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++ A L + I+ L G I+L DR SS AY + + +++I Sbjct: 59 IAFELLITADMLQ-CNHKIKKFLKNGGIVLSDRSPYSSIAY-------RPHLRNWIEKIH 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I LD+ VD LKR+ D +E+K E R+ +L +++ Sbjct: 111 KPLIKPDIVIFLDVSVDNALKRIYK---------HDKYEKKK--YLEIARRTYLRLSKEL 159 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ-KRVSPLSSK 222 +++ +F+ V ++ +I+ V+ KR+S S+ Sbjct: 160 --NFVKINANKNFKKVFLDVKHIIESSVKNKRLSLRPSQ 196 >gi|227827632|ref|YP_002829412.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|229584836|ref|YP_002843338.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238619800|ref|YP_002914626.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|227459428|gb|ACP38114.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|228019886|gb|ACP55293.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238380870|gb|ACR41958.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|323474682|gb|ADX85288.1| dTMP kinase [Sulfolobus islandicus REY15A] gi|323477416|gb|ADX82654.1| dTMP kinase [Sulfolobus islandicus HVE10/4] Length = 189 Score = 160 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 26/208 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I+ EGI+G+GKTT +LLK L+ K +V VTREP + + Sbjct: 3 KLIAIEGIDGSGKTTLANLLKEHLESKMKLNVIVTREPFSEDIIKLIEKI------GWND 56 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++FAA R HV + + + + +++ DR+ SS AYQG + ++ + Sbjct: 57 PILLVLLFAADREIHVNWLSK--IKDADLIILDRYYFSSIAYQGALGVDEQ----WIKMV 110 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEKRRQIFLDIAR 182 + PD I+LDLP+++ + R++N D F + + K R+ +L +A+ Sbjct: 111 NSYFPKPDMVILLDLPIEVAISRIKN----------DKFNFEEKIKSLAKVREKYLKLAK 160 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +IVD++ V + I+ + Sbjct: 161 EY--NFYIVDASKDKNEVLEQAIKIIQK 186 >gi|226287197|gb|EEH42710.1| thymidylate kinase [Paracoccidioides brasiliensis Pb18] Length = 232 Score = 160 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 16/223 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T +LL++ LQR+ ++V R P T A + L G + Sbjct: 11 QRGALIVVEGLDRAGKSTQCALLQKTLQREGHEVKYRRFPDRTTAIGKLINAYL-VGDSQ 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + + I+ + G ++ DR+ S Y +D L LD Sbjct: 70 LDDHSIHLLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKD-VPGLSLDWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-I 180 + + PD + L++ + +R L+ +E + ++ + RQ+F I Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAARR--------GGYGLERYE--NDILQARVRQLFQTFI 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221 R P ++++ S VA +IL+ + ++K + PL S Sbjct: 178 EREDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 220 >gi|241889738|ref|ZP_04777036.1| thymidylate kinase [Gemella haemolysans ATCC 10379] gi|241863360|gb|EER67744.1| thymidylate kinase [Gemella haemolysans ATCC 10379] Length = 202 Score = 160 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 12/211 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I FEG++G+GKTT I+LL+ + +R VH TR+P + L G+ Sbjct: 1 MKKGLLIVFEGLDGSGKTTQINLLEEWFKRNKKLVHSTRQPTDFYRNDKRVKDYLEDGIV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A++ AA R E I+P L +G ++ DR+L SS A+ R + Sbjct: 61 P-NMYSIALLAAADRTYQNEVEIKPTLSKGINIISDRYLYSSLAFFKARGIKYQE----I 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I+ PD I LD+ D L+RV+ R FE K+ + R FL++ Sbjct: 116 RNINKDIEEPDIIIFLDIDPDKALERVRVRDGKNL-----RFEEKNDNTFIQVRNNFLEV 170 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + IVDS + + I+ + ++ Sbjct: 171 --LPKGKTLIVDSTKDVKLIHELIIKYIEKV 199 >gi|154285394|ref|XP_001543492.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1] gi|150407133|gb|EDN02674.1| hypothetical protein HCAG_00538 [Ajellomyces capsulatus NAm1] Length = 232 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T + L++ LQ + ++V R P T + L + Sbjct: 11 QRGALIVLEGLDRAGKSTQCAFLQKTLQEEGHEVKYRRFPDRTTEIGKLINGYL-MQNAQ 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + I+ + G ++ DR+ S Y + + L L+ Sbjct: 70 LDDHSIHLLFSANRWEAAAE-IQRDISNGITVIIDRYSYSGAVYSAAK-NIPGLSLEWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 + + PD + L++ + KR ++ +E + + RQ+F ++ Sbjct: 128 QPEIGLPQPDIWLFLNISPEEAAKR--------GGYGMERYE--NDAFQTRIRQLFQELI 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 AR P+ H+VD+ + VA +++ +++ Sbjct: 178 AREDPNNIHVVDAGRAESEVALDVIRAARRAIEE 211 >gi|86158146|ref|YP_464931.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] gi|85774657|gb|ABC81494.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] Length = 218 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 18/201 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCG 58 G F+ EG++GAG TT LL L+ HVT EP G P R VL G Sbjct: 14 RGRFVVVEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVGGGG 73 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F A A++FAA R DH I P L G ++ DR+ SS AYQG ++ Sbjct: 74 GADFDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----ME 129 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177 ++ ++ PD T+ L + ++ L+R R +A LD + + + Sbjct: 130 WVRTVNAAAGPPDATLFLRVRPEVALRR-------RRAASLDREIYEVGAFQRRVAAEYD 182 Query: 178 --LDIARNQPDRCHIVDSAHS 196 + + R + +D Sbjct: 183 RAIALLRQAGESVVEIDGERP 203 >gi|15639345|ref|NP_218794.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025587|ref|YP_001933359.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14] gi|23821760|sp|O83373|KTHY_TREPA RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP kinase gi|3322633|gb|AAC65341.1| thymidylate kinase (tmk) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018162|gb|ACD70780.1| thymidylate kinase [Treponema pallidum subsp. pallidum SS14] gi|291059744|gb|ADD72479.1| thymidylate kinase [Treponema pallidum subsp. pallidum str. Chicago] Length = 208 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 22/212 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ FEGI+G G +T + L+R Q + D+ T+EP G R VL ++ Sbjct: 7 FVVFEGIDGTGTSTQLRALERHFQAR-KDMVFTQEPTGGEIGTLIRDVL--QKRVIMSSK 63 Query: 66 AEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A ++FAA R +H+E I L EGKI+LCDR++ SS YQG S E+ Sbjct: 64 ALGLLFAADRHEHLEGAGGINDCLAEGKIVLCDRYVFSSLVYQGMAVSGSFA-----YEL 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + +P+ D P+++ ++R+ R E + EK R+ + I R Sbjct: 119 NKEFPLPEVVFYFDAPIEVCVERITARGLQTELY-------EYTSFQEKARKGYETIFRK 171 Query: 184 ----QPDRCHI-VDSAHSFQSVATNILNIVWE 210 P I +D+ + V IL+ + E Sbjct: 172 CRHLYPAMKVIEIDAREEIEVVHERILHHLRE 203 >gi|119498863|ref|XP_001266189.1| thymidylate kinase [Neosartorya fischeri NRRL 181] gi|119414353|gb|EAW24292.1| thymidylate kinase [Neosartorya fischeri NRRL 181] Length = 221 Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 16/215 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G I EG++ AGK++ L+ LQ + V R P TP + L G Sbjct: 6 NRGALIVVEGLDRAGKSSQCERLRDSLQASGHSVKYIRFPDRTTPIGKLISSYL--QGQS 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + + I + G ++ DR+ S Y + +++L L+ Sbjct: 64 QADDHSIHLLFSANRWE-IAKSIEDDIANGISVIVDRYSYSGAVYSAAK-GNRNLSLEWA 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD + L + + KR ++ +E + + + R++F + Sbjct: 122 WQPEIGLPQPDMCLFLRISPEEAAKR--------GGFGVERYENETM--QNRVRELFQTL 171 Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q D H +D+ SF +V+ +I+ IV + +++ Sbjct: 172 FDLQQGDYVHTIDAGRSFDAVSQDIMKIVTDSIER 206 >gi|118351574|ref|XP_001009062.1| thymidylate kinase family protein [Tetrahymena thermophila] gi|89290829|gb|EAR88817.1| thymidylate kinase family protein [Tetrahymena thermophila SB210] Length = 211 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 22/223 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI FEG++ GKT+ L FL+ + R P T + L + Sbjct: 3 KRGLFIVFEGLDRCGKTSQCENLVNFLKESGKKAIMKRYPDRTTTIGQTINNYLQGKQN- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A ++F+A R + E I+ L EG ++CDR+ S Y + ++ + Sbjct: 62 LSDQAIHLIFSANRWEQQEE-IKKILDEGTNIVCDRYCYSGAVYTSAKGYD----IEWCK 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + L P ++ KR + +E++ +K R+ F ++ Sbjct: 117 NPDKGLIKPDIVLYLHAPKEVISKR--------SGFGGEVYEKE--EFQQKVREAFDNLL 166 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + + D +D++ + + V I + K+V +S KD Sbjct: 167 QKE-DNVVFIDASGTKEEVFDLINQNI-----KKVFEDASTKD 203 >gi|15898046|ref|NP_342651.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2] gi|284175899|ref|ZP_06389868.1| thymidylate kinase (tmK-2) [Sulfolobus solfataricus 98/2] gi|14285510|sp|P58157|KTHY2_SULSO RecName: Full=Probable thymidylate kinase 2; AltName: Full=dTMP kinase 2 gi|13814387|gb|AAK41441.1| Thymidylate kinase (tmK-2) [Sulfolobus solfataricus P2] gi|261602758|gb|ACX92361.1| thymidylate kinase [Sulfolobus solfataricus 98/2] Length = 213 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 101/217 (46%), Gaps = 16/217 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+FEGI+G+GK++ LLK +++ + DV++T + + + Sbjct: 2 RGLLIAFEGIDGSGKSSQAVLLKDWIEMR-RDVYLTEWNSSEWIHDIIKEA---KKKNML 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +++ A D E I P L G +++CDR++ ++YA RD +++ D ++ Sbjct: 58 TSITFSLIHATDFSDRYERYILPMLKSGFVVICDRYVYTAYA----RDVVRNVDFDWVKR 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDY-----FERKDVMIHEKRRQ 175 + + P+ T + + +I L+R++ R + A +D E + + + Sbjct: 114 LYSFAIKPNFTFYIRVTPEIALERIRKAKRKIKPQEAGIDILGEIPLEEGFLKYQSRIVE 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I+ IA+ + + +D + V +I I+ E + Sbjct: 174 IYDKIAKEESN-FITIDGNRPLKDVQIDIRKILGEYI 209 >gi|8247943|sp|Q55593|KTHY_SYNY3 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 212 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 13/215 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDE 61 LFI EGI+G+GKTT LL QR+ ++ EP P R L L D Sbjct: 4 LFIVLEGIDGSGKTTQGDLLLAHFQRQGLAAVLSPEPTNGPVGRLIRQALQGDLFTYNDA 63 Query: 62 FGAEAEA-IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 EA+ +FAA R H+ + + L + ++ R+ SS AY Sbjct: 64 RQFEAQMGYLFAADRHYHLYHPGDGVEAKLAQQCHVITTRYYFSSLAYNCH----TEADW 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + +Q ++ PD I LDLPVD+ L+R+ +R L + A + +E+++ +I + + Sbjct: 120 EFVQRLNQSFPQPDWVIYLDLPVDLALQRLGDRQQLEDQAPRECYEQREKLI--SVHRNY 177 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I + + +D++ + + I+ V E++ Sbjct: 178 DRIFAHYQGQLCRLDASLPVEQLHQAIITKVEEML 212 >gi|150399111|ref|YP_001322878.1| thymidylate kinase [Methanococcus vannielii SB] gi|166221757|sp|A6UP44|KTHY_METVS RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|150011814|gb|ABR54266.1| dTMP kinase [Methanococcus vannielii SB] Length = 198 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 32/219 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI FEGI+G+GKTT +L L + T EP R VL Sbjct: 1 MNK--FIVFEGIDGSGKTTQAKMLAEKLNAE-----YTCEPTTGKIGRTIREVL---SGS 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E A++FAA R++HV I L + ++ DR++ SS YQ + S+ + + Sbjct: 51 ECKKETLALLFAADRVEHVSE-IEKMLQK-SHVVTDRYVYSSIIYQTMQGISK----EFI 104 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I+ +PD +ILD+ + LKR+ E + FE+ + +K +Q + I Sbjct: 105 YSINFFAKIPDIVVILDVDTEEALKRM-------EFREKEIFEK--IEFQKKIKQEYHKI 155 Query: 181 ARN-----QPDR-CHIVDSA-HSFQSVATNILNIVWELV 212 A +P +V++ + + V + N + + + Sbjct: 156 AELKCSKFEPTYGFVMVNTTGKTPEEVFNELFNKILDKI 194 >gi|172036089|ref|YP_001802590.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142] gi|171697543|gb|ACB50524.1| putative thymidylate kinase [Cyanothece sp. ATCC 51142] Length = 208 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 90/214 (42%), Gaps = 20/214 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GVD 60 LFI EGI+ AGKTT LKR+L + ++ EP E R + S Sbjct: 4 LFIVLEGIDKAGKTTQAERLKRYLINQGDSAIISSEPTEGVIGELIRKAMQSPVFKINDK 63 Query: 61 EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + A +FAA R H+ N V + + ++ R+ SS AY +S+ Sbjct: 64 AKFDQQMAYLFAADRHYHLYNEVDGVYKLIQQDHYHVIATRYYFSSLAY----NSNNQEE 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + ++ + PD I LD+P+DI L R++N + + ++ + Sbjct: 120 FNFVYGLNKRFPNPDLVIYLDIPLDIALSRLENTHDKEVYETKEKL--------QQVQDN 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + I ++ + +D ++ + + I+ + + Sbjct: 172 YQQIFQSYKGQILTIDGKNNIEQIHQEIITYLEK 205 >gi|212535132|ref|XP_002147722.1| thymidylate kinase [Penicillium marneffei ATCC 18224] gi|210070121|gb|EEA24211.1| thymidylate kinase [Penicillium marneffei ATCC 18224] Length = 238 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 50/229 (21%), Positives = 93/229 (40%), Gaps = 24/229 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G + EG++ AGK++ LL + L NY R P TP + L G Sbjct: 11 KRGALVVVEGLDRAGKSSQCELLYKSLLGMNYKAKYIRFPDRSTPIGKQIDSYL--RGES 68 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + V I+ + +G ++ DR+ S Y + + +L L Sbjct: 69 QLDDHSIHLLFSANRWE-VAQSIQKDIADGTTVIVDRYSYSGAVYSAAK-GNPNLSLHWA 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD + L + + KR ++ +E + ++ R +FL + Sbjct: 127 WQPEVGLPRPDLCLFLSISPEEAAKR--------GGYGVERYE--TDSMQKRVRDLFLSL 176 Query: 181 ARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220 D ++D+ S VA +IL V E ++ K++ P + Sbjct: 177 LDLPHNDEICVIDAGQSVDEVALDILEPVLECMKNVDSIGPLKKLGPWT 225 >gi|297619540|ref|YP_003707645.1| thymidylate kinase [Methanococcus voltae A3] gi|297378517|gb|ADI36672.1| thymidylate kinase [Methanococcus voltae A3] Length = 223 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 101/217 (46%), Gaps = 31/217 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G+GK+T +L + + EP + + R L ++ E Sbjct: 28 FIVFEGIDGSGKSTQAKMLADR-----INAILDYEPTNSEVGKLIRKGLSEGCFEK---E 79 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++FA R++H + + + L + I+ CDR++ SS YQ ++Q + ++ + I+ Sbjct: 80 TLALLFAGDRVEHCKELAK-KLEKNHIV-CDRYVYSSIVYQ----NTQGIDIEYIYNINR 133 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 +PD ++LDL ++ + RV +R E FE+ + + R+ +L I ++ Sbjct: 134 YARVPDIVVLLDLNPELSMLRVNDRTGNNEI-----FEK--IEFQKIIREKYLQIFEDEK 186 Query: 186 DR----------CHIVDSAHSFQSVATNILNIVWELV 212 ++ +D+ S + I +++ + + Sbjct: 187 NKNKKSMFKPPIYIKIDANKSILELHNEIYDLIKQHI 223 >gi|152990566|ref|YP_001356288.1| thymidylate kinase [Nitratiruptor sp. SB155-2] gi|151422427|dbj|BAF69931.1| thymidylate kinase [Nitratiruptor sp. SB155-2] Length = 191 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 15/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I EGI+ AGK+T I LK D T+EPG TP R ++L + Sbjct: 1 MYILIEGIDRAGKSTQIEKLKTLFP----DALFTKEPGCTPLGNKIRDMVLHTQNP--SS 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI P L K ++ DR S AY + L +L I+ Sbjct: 55 LAELFLFLADRAEHIEKVILPNLK--KTIISDRGYISGIAYAAIKTELDLPTLRNLNAIA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ V PD + L+L + KR+ ++ LD E++ + + + I + +++ Sbjct: 113 MKNVYPDKIVFLELSENELRKRM-------DALPLDSIEQRGIEYLMQVQSIMKKVIQSE 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 P I+D++ + + IL + E Sbjct: 166 PIPSLILDASLDEEVIFQTILTFIKE 191 >gi|224055681|ref|XP_002298600.1| predicted protein [Populus trichocarpa] gi|222845858|gb|EEE83405.1| predicted protein [Populus trichocarpa] Length = 222 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 89/221 (40%), Gaps = 21/221 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I EG++ +GKT+ S L +L+ + + R P + + LS Sbjct: 16 SRGALIVLEGLDRSGKTSQSSRLLSYLEGLGHSTELWRFPDRSTSVGQMISAYLSNK-SH 74 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 75 LDDRTIHLLFSANRWE-KRSLMETQLKNGTTLVVDRYSYSGVAFSSAKG----LDIEWCK 129 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V + PD + LD+P + +R + +E+ + +K + + + Sbjct: 130 APEVGLLAPDIVLYLDIPPEKAAER--------GGYGGERYEQ--LEFQKKVAKCYQALC 179 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLS 220 + ++D+ + + + + V + V +R PLS Sbjct: 180 DSS---WKVIDACQPIEDIEKQLQDAVLDHVMACERGRPLS 217 >gi|332181321|gb|AEE17009.1| Thymidylate kinase [Treponema brennaborense DSM 12168] Length = 208 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 12/206 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+G+G +T I+LLK L T EP R +L G + Sbjct: 6 FIVFEGIDGSGTSTQIALLKNKLPNPG--TLFTAEPTSLATGRFLRTLL--RGDERLTPG 61 Query: 66 AEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +FAA R +HV + I +G I++ DR+ SS AYQ L E Sbjct: 62 TMAYLFAADRYEHVHAQDGILQTCADGGIVVSDRYFFSSLAYQSAECG--RELPAKLNE- 118 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +P+ D+ + L R+ R ++ E+ +E+ + A Sbjct: 119 --SFPLPEYLFYFDIEPSVSLNRITGRSVTEIYEKREFLEKTAAE-YERIIGEYEKTAVG 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 + +D++ S V+ NI +I+ Sbjct: 176 TGMKITRLDASESVAEVSENIWSILR 201 >gi|294950385|ref|XP_002786603.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983] gi|239900895|gb|EER18399.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983] Length = 233 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 92/218 (42%), Gaps = 20/218 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G FI EG++ +GK+T + + L+++ +V P + A L Sbjct: 1 MARGAFIVLEGLDRSGKSTQLRRISEALRQRTGKEVVEMGFPRRSSAIGKMLDTYLRDSS 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA ++F+A R + + ++ L G+ ++CDR++ S AY + + + Sbjct: 61 SKMRDEAVHLLFSANRWEAMSEMLSH-LAAGRHIVCDRYIFSGVAYTAMKGTVDF---EW 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + V PD + LDL + KR + + +E++D+ K R ++ Sbjct: 117 CKSVDVGLPKPDLVVFLDLSPEAAAKR--------GAYGEERYEKEDL--QMKVRTMYTK 166 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILN---IVWELVQK 214 +P I D+ + V + + V + ++K Sbjct: 167 F-EKEPF-WRIFDADRPAEEVTRTVTDAAVAVAQALEK 202 >gi|146303757|ref|YP_001191073.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula DSM 5348] gi|145702007|gb|ABP95149.1| thymidylate kinase / thymidylate synthase [Metallosphaera sedula DSM 5348] Length = 213 Score = 157 bits (399), Expect = 8e-37, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 17/217 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+FEGI+G+GK++ LLK +L + D ++T E + + Sbjct: 2 GGSIIAFEGIDGSGKSSQAKLLKDWLDSR-VDAYLTEWNSSDWIHEVIKEA---KKKNLL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ A D E +I P G +++ DR+ ++YA RDS + + L+ +++ Sbjct: 58 TPLTFSLIHATDFADRYERLILPMYRTGFVVVSDRYYYTAYA----RDSVRGVSLEWVKK 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDYF-ERKDVMIHEKRR----Q 175 + PD T + + ++ L R++ R + A D F + + K + + Sbjct: 114 LYSYAPKPDITFFIRVTPEVALSRLKESKRGIKPQEAGADVFPDLEPEEGFLKYQGMILE 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I+ +A + ++D S + + +I V EL+ Sbjct: 174 IYDKLAEEEG--FVVLDGNRSPREIQMDIRRRVGELL 208 >gi|259480991|tpe|CBF74121.1| TPA: thymidylate and uridylate kinase (Eurofung) [Aspergillus nidulans FGSC A4] Length = 223 Score = 157 bits (399), Expect = 8e-37, Method: Composition-based stats. Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 26/231 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ AGK++ L LQ V R P TP + L G Sbjct: 10 RGALIVVEGLDRAGKSSQCKFLHNILQEGGRPVKYIRFPDRTTPIGKLIDGYL--RGQSH 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V I + G ++ DR+ S Y + ++ L L+ Sbjct: 68 LDDHSIHLLFSANRWE-VAQSIEADIANGTSVIIDRYSYSGAVYSAAK-ANPSLSLEWAW 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---- 177 + V PD + L + + KR + +E + + + R++F Sbjct: 126 QPEVGLPKPDLCLFLSISPEEAAKR--------GGFGGERYENE--AMQTRVRELFNTIF 175 Query: 178 -LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLSSKKDI 225 L A + I+D+ S V+ +ILN+V E + SPL I Sbjct: 176 DLQRATD----IRIIDAGKSLAEVSQDILNVVTERIAGVDTASPLGKLTSI 222 >gi|164658566|ref|XP_001730408.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966] gi|159104304|gb|EDP43194.1| hypothetical protein MGL_2203 [Malassezia globosa CBS 7966] Length = 520 Score = 157 bits (399), Expect = 8e-37, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 24/214 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G+FI EG++ +GK+T + L + L + + P TP L + + Sbjct: 310 RGVFIVVEGLDRSGKSTQVDRLVQTL---GPRARLVKFPERTTPIGSMIHSYLKNQ--TD 364 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + + ++++ +L +G+ ++CDR++ S AY + L L Sbjct: 365 ACDQTVHLLFSANRWELLSSIVQ-SLRDGQHVICDRYIFSGMAYTHAKG----LDLAWCT 419 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---L 178 V +PD T+ LDL KR + +ER+ R F Sbjct: 420 APDVGLPVPDLTLFLDLDESTATKRAA--------YGEERYERR--AFQRLVRHAFENVE 469 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +D++ + V + V E+V Sbjct: 470 QLMLRSGARWERLDASGTLDDVWQAVHAQVQEVV 503 >gi|124516694|gb|EAY58202.1| Thymidylate kinase [Leptospirillum rubarum] Length = 217 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 17/220 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EGI+G+GK+T I LL+ +L+ K + V + + Sbjct: 8 GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKA---KKKQLLT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ AA + I PAL GKI+L DR++ ++ A RD+++ + D L Sbjct: 65 PYGFSLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRDWLVNN 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFE-----RKD-VMIHEKRRQI 176 + PD T + + R+ R A LD E R+ ++ + + Sbjct: 121 FRFAIRPDLTFFFRMDPALAYDRITQVRDIKYYEAGLD-MELSMNPRESYILFQSRVLEG 179 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + ++A+ ++D A + + +V L+Q + Sbjct: 180 YENLAKEHG--FSVLDGAKPVEETQRVVRRLVNPLIQSLL 217 >gi|15921837|ref|NP_377506.1| thymidylate kinase [Sulfolobus tokodaii str. 7] gi|23821798|sp|Q970Q8|KTHY2_SULTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|15622624|dbj|BAB66615.1| 213aa long hypothetical thymidylate kinase [Sulfolobus tokodaii str. 7] Length = 213 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 101/219 (46%), Gaps = 17/219 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+ I+FEGI+G+GK++ +LLK +++ K DV++T + + D Sbjct: 1 MKKGVLIAFEGIDGSGKSSQATLLKDWIELK-RDVYLTEWNSSDWIHDIIKEA---KKKD 56 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +++ A D E I P L G I++ DR++ ++YA RDS + + +D + Sbjct: 57 LLTPLTFSLIHATDFSDRYERYILPMLKSGFIVISDRYIYTAYA----RDSVRGVDIDWV 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYF-----ERKDVMIHEKR 173 +++ + PD T + + DI L+R++ + A D F E + Sbjct: 113 KKLYSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGLI 172 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++ + ++ + ++D + + + I V EL+ Sbjct: 173 TEVYDKLVKD--ENFIVIDGTKTPKEIQIQIRKFVGELI 209 >gi|315187239|gb|EFU20996.1| thymidylate kinase [Spirochaeta thermophila DSM 6578] Length = 215 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 17/212 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ FEGI+GAG TT + + L+ + + + TREP P R L S A Sbjct: 15 RFVVFEGIDGAGTTTQLRKVASSLKGRGHPLWETREPTDGPVGVFIRECLASG--LSLPA 72 Query: 65 EAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A +FAA R HV E+ + + G+I+LCDR+L SS AYQ + D ++ L +++ Sbjct: 73 SVYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQSDSDHTREL----VED 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH--EKRRQIFLDI 180 ++ + +P+ I LD PV+ L+R+ +R D FE+++V+++ + R++ L Sbjct: 129 LNHRFPLPEVVIYLDTPVEECLRRLSSRPQK------DLFEQREVLMNVVSRYREV-LRA 181 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + VD ++ IL + ++ Sbjct: 182 YEAEGGKVLYVDGTQPPDLISREILKFLEGIL 213 >gi|206603546|gb|EDZ40026.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG'] Length = 217 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 89/220 (40%), Gaps = 17/220 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EGI+G+GK+T I LL+ +L+ K + V + + Sbjct: 8 GRLIVVEGIDGSGKSTQIELLENYLRIKGFGVLRNAWNSSQEISPIIKKA---KKKQLLT 64 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ AA + I PAL GKI+L DR++ ++ A RD+++ + D L Sbjct: 65 PYGFSLLHAADFSYRYTHEILPALNAGKIVLSDRYIYTAIA----RDAARGIPRDWLVNN 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFE-----RKD-VMIHEKRRQI 176 + PD T + + R+ R A LD E R+ ++ + + Sbjct: 121 FRFAIRPDLTFFFRMDPALAYDRITQVRDIKYYEAGLD-MELSMNPRESYILFQSRVLEG 179 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + +A+ ++D A + + +V L+Q + Sbjct: 180 YESLAKEHG--FSVLDGAKPVEETQRVVRRLVNPLIQSLL 217 >gi|302896090|ref|XP_003046925.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256727853|gb|EEU41212.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 257 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 90/232 (38%), Gaps = 34/232 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G FI EG++ +GKTT + LL++ + V V R P TP + L S E Sbjct: 34 RGAFIVLEGLDRSGKTTQVKLLEQRFVEEGNKVKVMRFPDRSTPIGQMIDSYLKS--DVE 91 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V+ I+ L G ++CDR+ S Y + + L L + Sbjct: 92 MDDHVIHLLFSANRWEAVKQ-IQSLLAAGTTIVCDRYYHSGIVYSAAKQN-PSLTLPWAR 149 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD + LDL + R + +ER + + R++F ++ Sbjct: 150 APERGLPRPDLVLFLDLTEEQARSR--------GGWGGEVYER--SEMQRRVRELFWGLS 199 Query: 182 -------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + +VD+ S + VA + V V++ Sbjct: 200 MGGRDVTAQGLGLDEGEGWKQEEEDLVVVDAGGSVEEVAEEVWRKVKGRVEQ 251 >gi|307718813|ref|YP_003874345.1| thymidylate kinase [Spirochaeta thermophila DSM 6192] gi|306532537|gb|ADN02071.1| thymidylate kinase [Spirochaeta thermophila DSM 6192] Length = 242 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 19/213 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ FEGI+GAG TT + + L+ + + + TREP P R L S F A Sbjct: 42 RFVVFEGIDGAGTTTQLGKVASSLKGRGHTLWETREPTDGPVGTFIRECLASG--LSFPA 99 Query: 65 EAEAIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A +FAA R HV E+ + + G+I+LCDR+L SS AYQ S + +++ Sbjct: 100 SVYAYLFAADRDLHVFGEDGVMVRVGRGEIVLCDRYLHSSLAYQ----SDSAHTRELVED 155 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ + +P+ I LD PV+ L+R+ +R D FE+++V++ + ++ R Sbjct: 156 LNRRFPLPEVVIYLDTPVEECLRRLSSRPRK------DLFEQREVLM--NVASRYREVLR 207 Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + VD + IL + + Sbjct: 208 TYEAEGGKVLYVDGTQPPDLIFREILKFLERTL 240 >gi|290967771|ref|ZP_06559324.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L] gi|290782130|gb|EFD94705.1| dTMP kinase [Megasphaera genomosp. type_1 str. 28L] Length = 232 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 85/225 (37%), Gaps = 18/225 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58 G I EG +G+GK T LL R L R+ V+ P + + L Sbjct: 2 KGKLIVIEGGDGSGKATQADLLYRRLNREGKPVYKVTFPDYDSPSSMLVKMYLQGQFGKQ 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHL 115 D A + +A R + + L +G I++ DR+ S+ YQ + S ++ Sbjct: 62 ADSVNPYAASTFYAVDRFASYQMKWKTLLAQGYIIIADRYTTSNMLYQMIKISAPAARQT 121 Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +LD L + + +PD I+LD+P+ + + R D E+ + ++ Sbjct: 122 YLDWLWDFEFIKMGLPIPDIVILLDVPLAVTETLMAARQGKTGGETGDIHEK-NRAFLQQ 180 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 + ++A V S QS+ + +V + Sbjct: 181 CHAAYEELAHMYG--WRRVACTTQGKMRSPQSIQEEVYTVVATAL 223 >gi|223040987|ref|ZP_03611247.1| thymidylate kinase [Campylobacter rectus RM3267] gi|222877743|gb|EEF12864.1| thymidylate kinase [Campylobacter rectus RM3267] Length = 192 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 14/206 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+GAGK+T I+ L + VT+EPGGT E R +LL ++ Sbjct: 1 MYILFEGIDGAGKSTQIARLATAYPQ----AIVTKEPGGTKLGENLREILL--KENDLDK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H +I+P K++L DR S AY + L SL + + Sbjct: 55 RAEILLFLADRAEHSGKIIKP--NSDKMILSDRGFVSGMAYALAGGNFSFEELLSLNKFA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +Q P + R+ +R A +D E + + + +I + Sbjct: 113 LQGNFPQKIVFFKADESTLRSRLSSR------AQMDGIEARGFEYLLRVQDAMEEILQKL 166 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 +D+A + + I + + Sbjct: 167 DVSYVTIDAALDEEKITNLIKEFIND 192 >gi|325971230|ref|YP_004247421.1| thymidylate kinase [Spirochaeta sp. Buddy] gi|324026468|gb|ADY13227.1| Thymidylate kinase [Spirochaeta sp. Buddy] Length = 203 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 20/208 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEG++GAG TT + LL R + T EP P R VL Sbjct: 8 FIVFEGLDGAGTTTQMQLLAEACDRADTPCRATFEPTDKPIGRLVRSVL--QKQILTTPL 65 Query: 66 AEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A A+++AA R DH+ N I L GK+++ DR+L SS +YQG + SL E Sbjct: 66 ALAMLYAADREDHLNNPVYGIIHDLEAGKLVISDRYLYSSLSYQGV--ECDFEKIASLNE 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-A 181 P +D PVD L+R+ +R + E FE+K K ++ + I + Sbjct: 124 F----PSPQYVFFIDTPVDECLRRINSRGNEVEL-----FEKK--EFLHKVKENYERIFS 172 Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIV 208 P +D + +A+ I I+ Sbjct: 173 SLDPQVTLVRLDGLLKIEEIASQIQQIL 200 >gi|195150817|ref|XP_002016347.1| GL10538 [Drosophila persimilis] gi|194110194|gb|EDW32237.1| GL10538 [Drosophila persimilis] Length = 211 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 83/215 (38%), Gaps = 17/215 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FEG + GKTT LL FL+ K P + + L+ D Sbjct: 5 KRGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNSND- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +++ N IR L+ G L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAYTAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L D L R + +E+ + +K ++F I Sbjct: 119 APERGLIKPDAVFYLKTASDNLLSR--------GKYGEERYEK--LEFQQKVAEVFNRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + H +D+ S + T I + + E +Q++V Sbjct: 169 EQESSYWHQIDANQSVAEIHTQI-SGIAEKLQQQV 202 >gi|251771465|gb|EES52042.1| Thymidylate kinase [Leptospirillum ferrodiazotrophum] Length = 220 Score = 155 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 89/217 (41%), Gaps = 17/217 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EGI+G+GK+T + LL +LQ K + V + + R Sbjct: 11 GRLIVVEGIDGSGKSTQLDLLSDYLQSKGFGVLKSAWNSSPDISPIIRKA---KKKQVLT 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +++ AA I PA+ G I+L DR++ ++ A R + L + Sbjct: 68 PYAFSLLHAADFSFRYTYEILPAMEAGMIVLSDRYIYTAIARDCARGLPRPWLLSNFN-- 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFE-----RKD-VMIHEKRRQI 176 ++PD T + + + +R+ + R A LD E R+ ++ + Sbjct: 126 --FAIVPDLTFLFRVDPETSYQRITRTRSIKFYEAGLD-MELSTDPRESYILFQSRVLAE 182 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + ++ + H+VD+ S + T + ++ +++ Sbjct: 183 YDNL--RETHGFHVVDATLSLEKTQTRMRRLLSPIIR 217 >gi|255955699|ref|XP_002568602.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590313|emb|CAP96490.1| Pc21g15930 [Penicillium chrysogenum Wisconsin 54-1255] Length = 223 Score = 155 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 91/228 (39%), Gaps = 24/228 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ AGK++ +L+ L R+ + V R P TP + L Sbjct: 10 RRGALIVVEGLDRAGKSSQCEMLRDSLSRQGHVVKYIRFPDRTTPIGKLIDSYLRGSSHQ 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F+A R + + I + G ++ DR+ S Y + ++ L L+ Sbjct: 70 --DDHSIHLLFSANRWE-IAKSIEEDIANGTTVIVDRYSYSGVVYSAAK-ANPTLSLEWA 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD + L + + KR + +E + + + R++F I Sbjct: 126 WRPEIGLPRPDICLFLSISPEEAAKR--------GGFGAERYE--NGEMQTRVRELFQTI 175 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--------KRVSPLS 220 Q D I+D+ S + V+ I +V + + +++ PL+ Sbjct: 176 FEKQQD-VSIIDAGKSIEEVSQEIRGVVADCIARLDVAGALRKLGPLA 222 >gi|125808374|ref|XP_001360729.1| GA19108 [Drosophila pseudoobscura pseudoobscura] gi|54635901|gb|EAL25304.1| GA19108 [Drosophila pseudoobscura pseudoobscura] Length = 211 Score = 155 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 82/215 (38%), Gaps = 17/215 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FEG + GKTT LL FL+ K P + + L+ D Sbjct: 5 KRGALFVFEGCDRCGKTTQSRLLAEFLKSKGIPTLSMNFPERESSTGQVINSYLTNSND- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +++ N IR L+ G L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEYM-NKIRKELLAGTTLIVDRYSYSGVAYTAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L D L R + +E+ + +K ++F I Sbjct: 119 APERGLIKPDAVFYLKTASDNLLSR--------GKYGEERYEK--LEFQQKVAEVFNRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + H +D+ + T I + + E +Q++V Sbjct: 169 EQESSYWHQIDANQPVAEIHTQI-SGIAEKLQQQV 202 >gi|195487624|ref|XP_002091984.1| GE13938 [Drosophila yakuba] gi|194178085|gb|EDW91696.1| GE13938 [Drosophila yakuba] Length = 211 Score = 155 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 82/211 (38%), Gaps = 16/211 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPALPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LKDEVIHLMFSANRWEHM-NQMKQKLLEGHTLVVDRYSFSGVAYSSAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F + Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTNRGQYGEERYEK--VEFQSRVAKVFDRLC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 N+ H D++ + I +I EL+ Sbjct: 169 ANEASYWHQFDASQPVDELHARIASITEELL 199 >gi|219121041|ref|XP_002185752.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|209582601|gb|ACI65222.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 245 Score = 155 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 15/218 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ G F+ EG++ GKTT LL + L R P T A L + Sbjct: 8 ISRGAFVVLEGVDRCGKTTQSGLLLKRLLAAGIAACSMRFPDRTTATGKIIDQYLQSSQN 67 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFL 117 A ++F+A R + + + L G +LCDR+ S A+ + + L L Sbjct: 68 -LDDRAIHLLFSANRWES-ADALTAHLQAGTTVLCDRYAYSGVAFSASKIDKKGNSLLSL 125 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D Q PDC I LDL +R + +E+K++ I + R Sbjct: 126 DWCQAPDQGLPAPDCVIFLDLSQAEAEQR--------GGYGGERYEKKEMQIRVRHRFGD 177 Query: 178 LDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQ 213 L+ R +D+A S + V +I V E +Q Sbjct: 178 LEAIDKASGRVAWKFIDAAQSVEQVENDIWKAVEETIQ 215 >gi|302349154|ref|YP_003816792.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15] gi|302329566|gb|ADL19761.1| Putative thymidylate kinase [Acidilobus saccharovorans 345-15] Length = 214 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 51/195 (26%), Positives = 83/195 (42%), Gaps = 21/195 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G ++ EGI+G+G TTH LL + L Y T+EP P + R +L + Sbjct: 2 KGAIVALEGIDGSGITTHSKLLAQRLSSMGYRAIYTKEPTEGPVGQVIRQLLAQGRPE-- 59 Query: 63 GAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A++FAA R H + + AL +G +++ DR+ SS AYQG + Sbjct: 60 -PRLAALLFAADRSWHLCCDPSLPGGVMGALEQGYVVVMDRYKYSSIAYQGASGADPG-- 116 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L E++ D I +D+PV++ L RV R +E + + ++ Sbjct: 117 --WLWEVNSFAPEADLLIFIDVPVEVALSRVAERQRREG------YEVEG--FLRRAKER 166 Query: 177 FLDIARNQPDRCHIV 191 F ++ R V Sbjct: 167 FYEVLAQAEARGVTV 181 >gi|222100442|ref|YP_002535010.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359] gi|221572832|gb|ACM23644.1| Thymidylate kinase [Thermotoga neapolitana DSM 4359] Length = 143 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 12/149 (8%) Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE ++F A+R VE+ I+ L G ++ DR++DSS AYQG ++ L Sbjct: 1 MTPKAELLLFLASRNLLVED-IKHYLFRGYFVVLDRYVDSSVAYQGFGRGLGKEVVEKLN 59 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++PD T +D+ V+ L+R L+ FE++ E+ R+ +L +A Sbjct: 60 AFATDGLIPDVTFYIDIDVETALRR---------KGELNRFEKR--EFLERVRKGYLLLA 108 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P+R I+D + + + ++ + Sbjct: 109 EEHPERIVILDGNRTVEEIHRMVVEEIER 137 >gi|116623132|ref|YP_825288.1| thymidylate kinase/thymidylate synthase [Candidatus Solibacter usitatus Ellin6076] gi|116226294|gb|ABJ85003.1| thymidylate kinase / thymidylate synthase [Candidatus Solibacter usitatus Ellin6076] Length = 259 Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 15/219 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I+FEG +G+GKTT L K +L+ + ++V T+ + Sbjct: 27 RRGLLIAFEGPDGSGKTTQRKLFKNWLKSEGHEVVTTKWNSSALIKPLVKA---RKAARS 83 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +++ AA +E I PAL +G++++ DR+L ++ A RD+++ + L L Sbjct: 84 LSPEEFSLLHAADFRYRLETEILPALWQGQVVVADRYLFTALA----RDAARGMDLHWLL 139 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFE-----RKDVMIHEKRRQ 175 E+ PD + + KR+ R A D E + + Q Sbjct: 140 EVYRPLFWPDLVFYFSVSPETSGKRIAAERAPNFYEAGQDVTEIADPFQSYAHFIGRVIQ 199 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +A+ R VD+ S I + E V++ Sbjct: 200 EYEALAKVF--RFVTVDAEQSIFDQHRQIRELFAEGVRR 236 >gi|115377200|ref|ZP_01464412.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|310821205|ref|YP_003953563.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|115365783|gb|EAU64806.1| thymidylate kinase [Stigmatella aurantiaca DW4/3-1] gi|309394277|gb|ADO71736.1| Thymidylate kinase [Stigmatella aurantiaca DW4/3-1] Length = 220 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 19/220 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSC 57 G FI EG++GAG TT L L+ + + V TREP P R ++L Sbjct: 10 RGRFIVLEGLDGAGTTTQAERLAAALRAEGHAVLTTREPSDGPIGTMIRQALTGRLVLPQ 69 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G E A+++AA R DH++ + PAL G I+L DR++ SS AYQG L + Sbjct: 70 GAGPLAPETLALLYAADRTDHLKAKVLPALEAGHIVLSDRYVLSSLAYQGAA-----LAM 124 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ ++ V PD T+ + + + +R R + +E D + + + Sbjct: 125 AWVEAVNGHAVSPDLTLFVHVSPAVAARRRAARGAAKELFEEDTL-------QRRIARQY 177 Query: 178 LD--IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + R + +D + ++V L + ++ ++ Sbjct: 178 EEAIRRRESQETIVRIDGEQAVEAVTEAALVEIHSVLGRK 217 >gi|241613926|ref|XP_002407467.1| thymidylate kinase, putative [Ixodes scapularis] gi|215502816|gb|EEC12310.1| thymidylate kinase, putative [Ixodes scapularis] Length = 214 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 85/227 (37%), Gaps = 21/227 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + GLF+ FEG + GKTT I LL L + + P + L D Sbjct: 4 IQRGLFVVFEGCDRTGKTTQIKLLSESLSKLGHKTETVAFPNRSTTTGTLLDSYLKASTD 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F+A R + +++ L ++ DR+ S A+ + L Sbjct: 64 -LDDHAVHLLFSANRWEAAPSLLS-TLARNTTVIADRYAYSGVAFSAAKS----LDFRWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q+ V PD + + +P + R + +E + EK R + + Sbjct: 118 QQCDVGLPEPDLVLYMSVPPETLAAR--------GGFGEERYE--NSSFQEKVRANYNHL 167 Query: 181 A--RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR---VSPLSSK 222 A + R VD + S Q V I ++V E + K V L S+ Sbjct: 168 ASLEAKGGRWIEVDCSKSVQEVHHIIESVVLEALTKERADVGKLWSE 214 >gi|71018245|ref|XP_759353.1| hypothetical protein UM03206.1 [Ustilago maydis 521] gi|46099078|gb|EAK84311.1| hypothetical protein UM03206.1 [Ustilago maydis 521] Length = 1208 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 24/213 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG++ AGK+T + L LQ K + P T A + L+ + Sbjct: 424 KRGFFIVVEGLDRAGKSTQVERLAAHLQAK-----AVKFPERTTAIGQMINSYLAQ-TSD 477 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A ++F+A R + V ++ L G+ ++CDR+ S AY + S D + Sbjct: 478 LDDQAIHLLFSANRWECVASL-HRTLEAGESIVCDRYAFSGIAYSVAKGLSY----DWCR 532 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V +PD T+ LDL N + R + +E+ + K R+ F ++ Sbjct: 533 NPDVGLPLPDLTLFLDLD--------ANAAAARGGYGEERYEK--LDFQAKVREAFTRVS 582 Query: 182 RN---QPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ R +D++ + V ++ V + Sbjct: 583 QDVRTHGGRWVTIDASKTLDQVTDDMQKAVHRV 615 >gi|119183198|ref|XP_001242660.1| hypothetical protein CIMG_06556 [Coccidioides immitis RS] Length = 228 Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 14/220 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ AGK+T ++L L+ K ++ R P T + L G Sbjct: 14 MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYL-RGET 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A ++F+A R + + + IR + G ++ DR+ S Y + +++ L L+ Sbjct: 73 QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAK-NNRELSLEWA 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD L++ + R L+ +E +V + + ++F + Sbjct: 131 WQPEIGLPRPDLWFFLNISPEEAESR--------GGYGLERYE--NVTLQLRVGELFKSM 180 Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + + I+D+ S + VA +I V V PL Sbjct: 181 QGMENNEEMRIIDANQSKEQVARDISAQVLSAVDSIEGPL 220 >gi|45658645|ref|YP_002731.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|294827736|ref|NP_710987.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601] gi|59798325|sp|Q72NL9|KTHY_LEPIC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920823|sp|Q8F7Y6|KTHY_LEPIN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|45601889|gb|AAS71368.1| thymidylate kinase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293385579|gb|AAN48005.2| thymidylate kinase [Leptospira interrogans serovar Lai str. 56601] Length = 204 Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 57/217 (26%), Positives = 87/217 (40%), Gaps = 16/217 (7%) Query: 1 MNSGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M + F+ FEGI+G+GK+T L L EP + R L G Sbjct: 1 MKNKKPIFVVFEGIDGSGKSTLCKSLTEKLIELGIPSAAFTEPTNLETGKYLRKFL--RG 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E G E + F R + ++ I PAL K +L DR++ S+ AYQ D S + L Sbjct: 59 EIELGKEEQIEAFLNDREESLKQNILPALNSDKNVLLDRYMYSTAAYQSGDDLSPEMILK 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + ++ +PD LDL I L+R+ R +E FE + EK R + Sbjct: 119 --KNLNRNFKIPDLLFYLDLSPSIALERLNRRKEGKE-----RFE--TLAQLEKIRSAYE 169 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 I P +D + + L I ++ + Sbjct: 170 KIL---PKDTIRIDGNKNQNQIVQECLEIFLTNIKSK 203 >gi|40215537|gb|AAL48064.2| RE69454p [Drosophila melanogaster] Length = 225 Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 19 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 77 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 78 LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 133 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFNRIC 182 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 183 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 215 >gi|116805978|emb|CAL26368.1| CG5757 [Drosophila simulans] Length = 211 Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 119 APERGLIKPDAVFYLRAP--------SNDLTNRGQYGEERYEK--VEFQSRVAEVFDRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 169 SKEASYFHKFDATQSVEDLHAQIGSITEELLPK 201 >gi|258645659|ref|ZP_05733128.1| dTMP kinase [Dialister invisus DSM 15470] gi|260403025|gb|EEW96572.1| dTMP kinase [Dialister invisus DSM 15470] Length = 222 Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 21/227 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 MN G I EGI+G+GK T LL+ L ++ DV P + A + L+ Sbjct: 1 MN-GKLIVLEGIDGSGKATQSGLLEDHLIKRGKDVMHISFPDYGSPSSALVKMYLNGDFG 59 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113 + A ++++A R + G +++ DR+ S+ +Q + + + Sbjct: 60 RAPGDVNPYAASMLYAVDRFASFRMKWKSFYENGGVVIADRYTTSNMVHQMTKYDDEGKR 119 Query: 114 HLFLDSLQEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL L + ++ PD I+LD+P + K V+ R ++ +D E+ Sbjct: 120 KEFLSWLDHMEYEELELPRPDVVILLDVPPAVSKKLVRER--AKQGGSMDIHEQHS-AYL 176 Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212 EK + + + D S ++ +L+ V + Sbjct: 177 EKCCDAYQVLCETYD--WLRISCMADGRLRSTDDISKEVLDAVLSRL 221 >gi|307150937|ref|YP_003886321.1| thymidylate kinase [Cyanothece sp. PCC 7822] gi|306981165|gb|ADN13046.1| thymidylate kinase [Cyanothece sp. PCC 7822] Length = 207 Score = 154 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 24/224 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 MN LFI EGI+G+G +T +LLK + +K ++ EP + R + Sbjct: 1 MNK-LFIVLEGIDGSGTSTQATLLKDYFIQKGDKAVISPEPTNGVIGKMIREAMQKPIIL 59 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + + A +FAA R H+ N + + +G L+ R+ SS AY + Sbjct: 60 MEDKQSFDQQMAYLFAADRHYHLYNDLDGVFKLIQDGSHLITTRYYFSSLAYNCHT-PEE 118 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 F+ L E + PD I +D+PV++ L+R+Q R +D +E + +I Sbjct: 119 FKFVRQLNE---RFPNPDLVIYIDIPVEVSLERLQERT------IIDVYENSEKLIQ--V 167 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 R + +I VD V I+ E ++K+ + Sbjct: 168 RNNYQNIFETYEGLLLKVDGTAEINQVHDKII----EFLEKQFT 207 >gi|313622095|gb|EFR92678.1| thymidylate kinase [Listeria innocua FSL J1-023] Length = 136 Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 4/139 (2%) Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 AR HV IRPAL GK +LCDRF+DSS AYQG + + ++++ +PD T Sbjct: 1 ARRQHVVETIRPALAAGKTVLCDRFMDSSLAYQGAGRDMNMEQVLQVNLYAIEDTIPDRT 60 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 LD+P ++GL R+ + ++ +++D+ HEK + + I + PDR VD+ Sbjct: 61 YYLDVPAEVGLARIAAN----KGREVNRLDKEDITYHEKVQNGYEKIIQMFPDRFMRVDA 116 Query: 194 AHSFQSVATNILNIVWELV 212 + + + IL + + + Sbjct: 117 TKTPEEITDIILADILKQL 135 >gi|194880945|ref|XP_001974613.1| GG20995 [Drosophila erecta] gi|190657800|gb|EDV55013.1| GG20995 [Drosophila erecta] Length = 211 Score = 154 bits (390), Expect = 8e-36, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 81/217 (37%), Gaps = 19/217 (8%) Query: 1 MNSGL---FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 MN+G I FEG + +GK+T LL L K P + + L+ Sbjct: 1 MNAGKRGALIIFEGCDRSGKSTQSQLLVALLNSKGIPALPMNFPERSSIIGQVINSYLTN 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 D E ++F+ R +H+ N I+ L EG+ ++ DR+ S AY + L Sbjct: 61 SKD-LPDEVIHLMFSTNRWEHM-NYIKQNLHEGRTVVVDRYSFSGVAYSAAKG----LDF 114 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D + PD L P R Q + +E+ V + ++F Sbjct: 115 DWCYAPERGLIKPDAVFYLRAPPADLTNRTQ--------YGEERYEK--VEFQGRVAKVF 164 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I Q H D+ + + I +I EL+ K Sbjct: 165 DRICSEQGSYWHQFDATKPVEDLHAQIASITEELLPK 201 >gi|116805956|emb|CAL26357.1| CG5757 [Drosophila melanogaster] gi|116805970|emb|CAL26364.1| CG5757 [Drosophila melanogaster] gi|223967375|emb|CAR93418.1| CG5757-PA [Drosophila melanogaster] gi|223967383|emb|CAR93422.1| CG5757-PA [Drosophila melanogaster] Length = 211 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 52/213 (24%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFDRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I NI EL+ K Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIANITEELLPK 201 >gi|329122084|ref|ZP_08250692.1| thymidylate kinase [Dialister micraerophilus DSM 19965] gi|327466891|gb|EGF12407.1| thymidylate kinase [Dialister micraerophilus DSM 19965] Length = 224 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 86/225 (38%), Gaps = 20/225 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G I EGI+G+GK T LL L++ N V P + + + L+ Sbjct: 2 GGKLIVLEGIDGSGKATQSELLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 ++ A ++ +A R + + +G I++ DR+ S+ +Q + + + Sbjct: 62 PEDVNPYAASMFYAVDRFASYKMKWKKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121 Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FL L+E + PD I+LD+P++I K V+ R +D E+ + K Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKERALS--GGNMDIHEK-HLDYLHK 178 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 + + + + + +A I V + Sbjct: 179 CYDSYQWLCKRY--NWEKISCTNKKELKKVEEIAEEIYKTVNGKI 221 >gi|291276513|ref|YP_003516285.1| putative thymidylate kinase [Helicobacter mustelae 12198] gi|290963707|emb|CBG39540.1| putative thymidylate kinase [Helicobacter mustelae 12198] Length = 193 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 23/208 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+ +GKTT I LLK TREPGG+ E R ++L + Sbjct: 1 MYIVFEGIDTSGKTTQIELLKPLFP----HAIFTREPGGSRIGEKIRKMILEQ--EGLNP 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R H+ VI P + +++ DR S AY L + Sbjct: 55 TAEFFLFLADRAQHISEVILPH--KKDLIIADRSFVSGIAYA----EDLFPEAYELNLFA 108 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN- 183 +Q ++PD I+ + + KR++N+++ D E++ + + ++ L I + Sbjct: 109 MQGLLPDKVIVFKIDQEDLCKRLKNKHN-------DVIEKRGMDYLLRVQENLLSITKRL 161 Query: 184 QPDRCH---IVDSAHSFQSVATNILNIV 208 + +R ++D+ + + + IL + Sbjct: 162 EKERGVERLVLDAGKNPRDLHQEILKAL 189 >gi|220917316|ref|YP_002492620.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955170|gb|ACL65554.1| dTMP kinase [Anaeromyxobacter dehalogenans 2CP-1] Length = 219 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 18/198 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDE 61 F+ EG++GAG TT LL L+ HVT EP G P R VL + Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGVAGAD 77 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F A A++FAA R DH I P L G ++ DR+ SS AYQG ++ ++ Sbjct: 78 FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWVR 133 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---L 178 +++ PD T+ L + ++ L+R R +A LD + K + + Sbjct: 134 QVNGAAGPPDATLFLRVRPEVALRR-------RRAASLDREIYEVGAFQRKVAAEYDRAI 186 Query: 179 DIARNQPDRCHIVDSAHS 196 + R + +D Sbjct: 187 ALLRQAGESVIEIDGERP 204 >gi|313891688|ref|ZP_07825295.1| dTMP kinase [Dialister microaerophilus UPII 345-E] gi|313119966|gb|EFR43151.1| dTMP kinase [Dialister microaerophilus UPII 345-E] Length = 224 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 85/225 (37%), Gaps = 20/225 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G I EGI+G+GK T LL L++ N V P + + + L+ Sbjct: 2 GGKLIVLEGIDGSGKATQSQLLAEALKKNNKSVIQVTFPDYESQSSSLVKMYLNGNFGTA 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 ++ A ++ +A R + +G I++ DR+ S+ +Q + + + Sbjct: 62 PEDVNPYAASMFYAVDRFASYKMKWEKFYEQGGIVIADRYTTSNMVHQMTKYDNEDEREK 121 Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FL L+E + PD I+LD+P++I K V+ R +D E+ + K Sbjct: 122 FLKWLEETEYKILGLPTPDMVILLDVPLEISEKLVKERALS--GGNMDIHEK-HLDYLHK 178 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 + + + + + +A I V + Sbjct: 179 CYDSYQWLCKRY--NWEKISCTNKKELKKVEEIAEEIYKTVNRKI 221 >gi|197122531|ref|YP_002134482.1| dTMP kinase [Anaeromyxobacter sp. K] gi|196172380|gb|ACG73353.1| dTMP kinase [Anaeromyxobacter sp. K] Length = 219 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 18/198 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDE 61 F+ EG++GAG TT LL L+ HVT EP G P R VL + Sbjct: 18 FVVLEGLDGAGTTTQARLLGERLRADGRTAHVTAEPSGGPVGALVRQVLTRRVTGAAGAD 77 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F A A++FAA R DH I P L G ++ DR+ SS AYQG ++ ++ Sbjct: 78 FDPHALALLFAADRRDHRAVEIDPKLAAGIDVVSDRYTLSSLAYQGAALGE----MEWVR 133 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---L 178 +++ PD T+ L + ++ L+R R +A LD + K + + Sbjct: 134 QVNGAAGPPDATLFLRVRPEVALRR-------RRAASLDREIYEVGAFQRKVAAEYDRAI 186 Query: 179 DIARNQPDRCHIVDSAHS 196 + R + +D Sbjct: 187 ALLRQAGESVIEIDGERP 204 >gi|28573735|ref|NP_611290.3| CG5757 [Drosophila melanogaster] gi|28380736|gb|AAF57756.2| CG5757 [Drosophila melanogaster] gi|220949114|gb|ACL87100.1| CG5757-PA [synthetic construct] gi|220958186|gb|ACL91636.1| CG5757-PA [synthetic construct] gi|223967371|emb|CAR93416.1| CG5757-PA [Drosophila melanogaster] gi|223967373|emb|CAR93417.1| CG5757-PA [Drosophila melanogaster] gi|223967377|emb|CAR93419.1| CG5757-PA [Drosophila melanogaster] gi|223967379|emb|CAR93420.1| CG5757-PA [Drosophila melanogaster] gi|223967385|emb|CAR93423.1| CG5757-PA [Drosophila melanogaster] gi|223967387|emb|CAR93424.1| CG5757-PA [Drosophila melanogaster] gi|223967391|emb|CAR93426.1| CG5757-PA [Drosophila melanogaster] Length = 211 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFNRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|39938830|ref|NP_950596.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|39721939|dbj|BAD04429.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 204 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 7/173 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKTT I +++ L+++ ++V + G + + R + L+ + Sbjct: 2 KLIVFEGLDGSGKTTLIQKIRKQLEKQGHEVITLQGLGSSSIGQPLRDIFLT--NAQLKP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ A E I+P L KI+L DR+L S++AYQ + + ++ Sbjct: 60 LTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNY-QLFNLLN 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 Q + PD T+ L + +GL+R QN+ + LD E + + Q + Sbjct: 119 KQFIKPDMTVYLKIKPQLGLERKQNQKDHK----LDVIETHPLSYFRQVSQGY 167 >gi|68067163|ref|XP_675552.1| thymidylate kinase [Plasmodium berghei strain ANKA] gi|56494802|emb|CAH95718.1| thymidylate kinase, putative [Plasmodium berghei] Length = 218 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 20/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG++ +GK+T LL L+ N V P L Sbjct: 13 KKGNFIVFEGVDRSGKSTQSKLLVEHLKNNNIQVQYLCFPNRETTIGKIIANYLKMEST- 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F E ++F+A R + ++ I+ L+ G ++CDR+ S AY + Sbjct: 72 FSNETIHLLFSANRWEMMDQ-IKNLLINGIWVICDRYAYSGVAYSSGALKLPK---EWCM 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L++P R S + FE I ++ + + + Sbjct: 128 NPDKGLIKPDAVCYLNVPPTYAKNR-----SEYGKEIYEKFE-----IQKRIYEAYEHFS 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV---QKRVSPLSS 221 D +D+ S Q + I+ + ++ +K++ L S Sbjct: 178 NE--DYWINIDATKSIQEIHNTIVEEISKMCSSKKKQLEYLWS 218 >gi|156380955|ref|XP_001632032.1| predicted protein [Nematostella vectensis] gi|156219082|gb|EDO39969.1| predicted protein [Nematostella vectensis] Length = 214 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 49/227 (21%), Positives = 85/227 (37%), Gaps = 24/227 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I FEG + +GK+T LL +L+ ++ R P T + L G Sbjct: 5 TRGALICFEGCDRSGKSTQSRLLVDYLRSLGTNIEHMRFPDRSTAIGQCINSYL--QGTS 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A ++F+A R + V IR L G ++ DR+ S A+ + L+ Sbjct: 63 ELDDHAIHLLFSANRWESVSK-IRSLLNTGTTIVVDRYAFSGVAFTSAKKGFD---LEWC 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I LD+ VD +R + + +E + ++ Sbjct: 119 KAPDRGLPAPDIVIFLDISVDNAAERSE--------YGGERYE--TSDFQRSVANRYKEL 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ----KRVSPLSSKK 223 D ++D+ S + + I I E ++ K + L + K Sbjct: 169 QA---DSWKVLDAGKSIEELHKEIQKIACETIKLASDKALETLWTSK 212 >gi|195584457|ref|XP_002082023.1| GD25418 [Drosophila simulans] gi|194194032|gb|EDX07608.1| GD25418 [Drosophila simulans] Length = 211 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEHM-NQVKQKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 119 APERGLIKPDAVFYLRAP--------SNDLTNRGQYGEERYEK--VEFQGRVAEVFDRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 169 SKEASYFHKFDATQSVEDLHAQIGSITEELLPK 201 >gi|218437720|ref|YP_002376049.1| dTMP kinase [Cyanothece sp. PCC 7424] gi|218170448|gb|ACK69181.1| dTMP kinase [Cyanothece sp. PCC 7424] Length = 207 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 21/216 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M LFI EGI+G+G +T SLL+ + K ++ EP + R + Sbjct: 1 MKK-LFIVLEGIDGSGTSTQASLLQDYFINKGEKAVISPEPTSGVIGKLIREAMQKPIIC 59 Query: 58 -GVDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + + A +FAA R H+ N V + + ++ R+ SS AY Sbjct: 60 LEDQQKFDQQMAYLFAADRHYHLYNDSDGVFKLIEKDQCHVITTRYYFSSLAYNCHT-PE 118 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + F+ L E + PD I +DLPV++ L+R+Q R D +E ++ + Sbjct: 119 EFKFVSQLNE---RFPNPDLVIYIDLPVEVSLERLQERTIK------DVYENREKLTQ-- 167 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 R + +I +D + + NIL V Sbjct: 168 VRNNYHNIFSRYNGLILKIDGTETIIKINQNILKFV 203 >gi|116805958|emb|CAL26358.1| CG5757 [Drosophila melanogaster] Length = 211 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 119 APERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFDRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|313682360|ref|YP_004060098.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994] gi|313155220|gb|ADR33898.1| thymidylate kinase [Sulfuricurvum kujiense DSM 16994] Length = 193 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 15/208 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I L+ D +T+EPGGT R+++L + Sbjct: 1 MYIAIEGIDTAGKSTQIEALRSLFP----DALITKEPGGTTVGTEIRNMVLHGNLK--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H E+VI P + K+++ DR S AY ++ L L ++ Sbjct: 55 TAELLLFLADRAEHTESVILPNMN--KLIISDRSAVSGMAYASVQNLCDEPVLVMLNRLA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +PD IL L + R+ + D E + + + A Sbjct: 113 TGGTLPDTVFILKLTSEELSYRLSQKEH-------DVIESRGTEYLLGIQDALIASAYAL 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++D+ S ++ I + + Sbjct: 166 GIQTVVIDATQSIDTITKEITTFIKGAL 193 >gi|164688846|ref|ZP_02212874.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM 16795] gi|164602050|gb|EDQ95515.1| hypothetical protein CLOBAR_02494 [Clostridium bartlettii DSM 16795] Length = 224 Score = 153 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 12/222 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G I EG +G+GK T L L+ +NY + P + A + L Sbjct: 2 KGKLIIIEGSDGSGKATQTKKLYDRLEAENYKIKKVEFPNYNSESSALVKMYLRGDFGKN 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116 + + +A R + G I++CDR+ S+ +Q + +S + + Sbjct: 62 ATDVDPYVCSTFYAVDRYASFKTGWEEFYNNGGIIICDRYTTSNMVHQASKIDESERDKY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L ++ PDC I LD+PV++ +Q+R + D +K Sbjct: 122 LDWLNDLEFNLYKIPKPDCVIFLDVPVEVSKSLMQDRNNKITGESEKDIHESDFEYLKKS 181 Query: 174 RQIFLDIARNQP-DRCHIVDSAH--SFQSVATNILNIVWELV 212 + + IA R + +++ + + I +I+ + + Sbjct: 182 YENSIYIADKYDWKRINCIENNQLRTIDDIHNEIYSIIEDEI 223 >gi|301118893|ref|XP_002907174.1| thymidylate kinase [Phytophthora infestans T30-4] gi|262105686|gb|EEY63738.1| thymidylate kinase [Phytophthora infestans T30-4] Length = 216 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 20/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG-GTPAAEAARHVLLSCG 58 G+F+ FEG++ GKTT LL L + + P T ++ L S Sbjct: 3 RRGIFLLFEGVDRCGKTTQTKLLHDALNASSSSQPSALLHFPDRSTAIGKSIHSYLTSS- 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + ++F+A R + I L G+ ++ DR+ S A+ + LD Sbjct: 62 -EAMDDHVIHLLFSANRWEAASK-IESILASGQHIIMDRYSFSGVAFSAAKSGMS---LD 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + PD I LD+PV R + +E EK + F Sbjct: 117 WCWAPEIGLPKPDAIIFLDVPVTQASTRA--------DFGQERYE--TTAFQEKVYRNFY 166 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV-SPLS 220 DI + H+VD+ + + V ++ I E ++K SPL+ Sbjct: 167 DIMERATPKWHVVDATGTIEQVQEKVMAIAKETIKKYAESPLT 209 >gi|40556108|ref|NP_955193.1| CNPV170 thymidylate kinase [Canarypox virus] gi|40233933|gb|AAR83516.1| CNPV170 thymidylate kinase [Canarypox virus] Length = 212 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 93/222 (41%), Gaps = 16/222 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+FI EG++ +GKT L +++ K Y + P + L ++ Sbjct: 1 MQRGMFIVLEGLDRSGKTVQCEKLLQYMLEKGYKTESLKFPNRETEIGKVINSYLEKKIN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F+A R + + ++I+ L L+ DR+ S A+ +++ L+ Sbjct: 61 -INDRAIHLLFSANRWE-LADLIKDKLSHNINLIVDRYAFSGAAFTAAKNNVS---LEWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + +PD I LD+ S RE+ ++ +E ++ R+ F D+ Sbjct: 116 KLTDSGLPLPDLVIFLDISASES--------SDRENFGMERYE--TASFQDEVRKRFYDL 165 Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + ++D+ + + + I +V +++ K P+ S Sbjct: 166 IKGTDSINWKVIDATKTIEDIHEEIKLLVEDVIDKLNDPIGS 207 >gi|169776481|ref|XP_001822707.1| thymidylate kinase [Aspergillus oryzae RIB40] gi|83771442|dbj|BAE61574.1| unnamed protein product [Aspergillus oryzae] Length = 225 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK++ L+ +LQ + V R P T A L G + Sbjct: 10 TRGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYL-RGQSQ 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + + VI + +G ++ DR+ S Y + L L Sbjct: 69 LDDHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVYSAAK-GIPTLSLGWAW 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L + KR ++ +E + + + R++F + Sbjct: 127 QPEVGLPRPDMCLFLRISPTEAAKR--------GGFGVERYENETM--QSRVRELFQTLF 176 Query: 182 RNQPDR-CHIVDSAHSFQSVATNILNIVWELVQK 214 QP+ H+V++ SFQ V+ I + + + Sbjct: 177 DLQPNGDIHVVNAGRSFQEVSEEIRGKATDCIAR 210 >gi|185177554|pdb|2PLR|A Chain A, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus Tokodaii Strain7 gi|185177555|pdb|2PLR|B Chain B, Crystal Structure Of Dtmp Kinase (St1543) From Sulfolobus Tokodaii Strain7 Length = 213 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 100/218 (45%), Gaps = 17/218 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+FEGI+G+GK++ +LLK +++ K DV++T + + D Sbjct: 2 KKGVLIAFEGIDGSGKSSQATLLKDWIELK-RDVYLTEWNSSDWIHDIIKEA---KKKDL 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +++ A D E I P L G I++ DR++ ++YA RDS + + +D ++ Sbjct: 58 LTPLTFSLIHATDFSDRYERYILPXLKSGFIVISDRYIYTAYA----RDSVRGVDIDWVK 113 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYF-----ERKDVMIHEKRR 174 ++ + PD T + + DI L+R++ + A D F E + Sbjct: 114 KLYSFAIKPDITFYIRVSPDIALERIKKSKRKIKPQEAGADIFPGLSPEEGFLKYQGLIT 173 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +++ + ++ + ++D + + + I V EL+ Sbjct: 174 EVYDKLVKD--ENFIVIDGTKTPKEIQIQIRKFVGELI 209 >gi|148264611|ref|YP_001231317.1| dTMP kinase [Geobacter uraniireducens Rf4] gi|146398111|gb|ABQ26744.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 228 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 18/215 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG++G+GK+T + LLKR+L+ + V+ T +A Sbjct: 11 GKLIAVEGLDGSGKSTQLYLLKRWLELRGLKVYFTEWNSSVIVKKATSK---GKKRQLLT 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ +A D E I P L G ++LCDR++ +++A R S+ +L +L Sbjct: 68 PTTFSLIHSADLADRYERQILPLLKAGYLVLCDRYVYTAFARDAVRGCSR-TWLRNLYGF 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL-------DYFERKDVMIHEKRRQ 175 + PD T+ D P+ + L R+ R L+ D ++ + E+ Sbjct: 127 ARH---PDLTLFFDTPLSVALSRILSGRPQLKYHEAGMDLGLANDPYQSFRL-FQERIYN 182 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +L + +D + S + + IV + Sbjct: 183 EYLGMRDEFS--FVTIDGSVSIEEQQIKVREIVGQ 215 >gi|327267155|ref|XP_003218368.1| PREDICTED: thymidylate kinase-like [Anolis carolinensis] Length = 212 Score = 152 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 15/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L K + + R P T L + Sbjct: 4 RRGALIVLEGVDRAGKSTQSRRLVEALGAKGHRAELLRFPERTTKIGQLISSYLEKKNN- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ L+ + Sbjct: 63 LEDHTVHLLFSANRWEQVP-LIKEKLNQGITLVVDRYAFSGVAFTGAK---ENFSLEWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L KR + +E + EK Q + D+ Sbjct: 119 QPDVGLPKPDVILFLQLNTSEAAKR--------GDFGSERYE--NSSFQEKVLQCYYDLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ ++D++ + + + I +IV E +Q+ Sbjct: 169 EDKTLNWKVIDASKTIEDLHNEIKSIVEEAMQE 201 >gi|312194212|ref|YP_004014273.1| hypothetical protein FraEuI1c_0317 [Frankia sp. EuI1c] gi|311225548|gb|ADP78403.1| protein of unknown function DUF894 DitE [Frankia sp. EuI1c] Length = 820 Score = 152 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 9/217 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60 ++GLF++ EG + + + L+R+L +V VT E P T EAA + Sbjct: 560 HAGLFVAIEGADFRSRADQLESLRRWLLEAGREVLVTAESPADTSELEAALRTVQPDPAA 619 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A++ AA +HV VI PAL G ++L D ++D+ A Q + L L Sbjct: 620 GLHPRTTALLTAAIHAEHVARVIEPALARGAVVLTDSYVDAEIARQSAEACAALDELTIL 679 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR---VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + ++PD TI+LD+ R + S + ++ R Sbjct: 680 SHWATRSLVPDVTILLDVEP-----RNPSAPGTPANGTSTNGARANGHGGLFDQRVRAAL 734 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 L +A ++P R ++D + I V + + Sbjct: 735 LQLADDEPHRYLVLDGTAPASELRGRIRQAVQRRLTE 771 >gi|238503185|ref|XP_002382826.1| thymidylate kinase [Aspergillus flavus NRRL3357] gi|220691636|gb|EED47984.1| thymidylate kinase [Aspergillus flavus NRRL3357] Length = 225 Score = 152 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK++ L+ +LQ + V R P T A L G + Sbjct: 10 TRGALIVVEGLDRAGKSSQCENLRDYLQESGHSVKYVRFPDRTTAIGKLIDSYL-RGQSQ 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + + VI + +G ++ DR+ S Y + L L Sbjct: 69 LDDHSIHLLFSANRWE-IAKVIEEDIAKGITVIVDRYSYSGAVYSAAK-GIPTLSLGWAW 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L + KR ++ +E + + + R++F + Sbjct: 127 QPEVGLPRPDMCLFLRISPTEAAKR--------GGFGVERYENETM--QSRVRELFQTLF 176 Query: 182 RNQPDR-CHIVDSAHSFQSVATNILNIVWELVQK 214 QP+ H+V++ SF+ V+ I + + + Sbjct: 177 DLQPNGDIHVVNAGRSFKEVSEEIRGKATDCIAR 210 >gi|50548641|ref|XP_501790.1| YALI0C13354p [Yarrowia lipolytica] gi|49647657|emb|CAG82100.1| YALI0C13354p [Yarrowia lipolytica] Length = 204 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 90/208 (43%), Gaps = 20/208 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI+ EG++ +GK+T L L + H+ + P + + L+ GV Sbjct: 2 RGRFIAIEGLDRSGKSTQCDRLVAHLTETTGNKTHLFKFPDRSTPMGQIINQYLTSGV-A 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A ++F+A R + +E+ I+ L +G+ ++ DR+ S Y + + Sbjct: 61 LSDQAIHLLFSANRWERIED-IKALLEKGENVVLDRYYISGIVYTQAKGLERQ----WCT 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +PD T+ L + ++ +R + + +E+ + ++ +F ++A Sbjct: 116 NPDLGLPVPDITLFLTVSPEVASQR--------GAYGEERYEK--IAFQKRVAALFHEVA 165 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 + C VD++ + + VA I V Sbjct: 166 QRN---CITVDASGTEEEVANAINQCVE 190 >gi|116330468|ref|YP_800186.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122281774|sp|Q04UJ2|KTHY_LEPBJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116124157|gb|ABJ75428.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 205 Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 82/214 (38%), Gaps = 14/214 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +F+ FEGI+G+GK+T L L + EP + R L G + Sbjct: 5 KPIFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFTEPTNFETGKYLRKFL--RGEIDL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + F R + + I P+L GK +L DR++ S+ AYQ D ++ + Sbjct: 63 ERKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQSGDDLLPETIIE--KN 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +PD LDL I L+R+ R +E FE + EK R + I Sbjct: 121 LKKNFKIPDLLFYLDLNPAIALERLSQRKENKE-----RFE--TLAQLEKIRSAYNRIL- 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 P +D + L I K+ Sbjct: 173 --PKETIRIDGVKGPDEIVQECLEIFLRNFNKKF 204 >gi|67925004|ref|ZP_00518388.1| Thymidylate kinase [Crocosphaera watsonii WH 8501] gi|67853148|gb|EAM48523.1| Thymidylate kinase [Crocosphaera watsonii WH 8501] Length = 208 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 92/214 (42%), Gaps = 20/214 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GVD 60 LFI EGI+ AGKTT LLK +L ++N ++ EP + R + + Sbjct: 4 LFIVLEGIDKAGKTTQAELLKHYLIKQNNSAIISSEPTEGVIGKLIRKAMQNPVFVMKDK 63 Query: 61 EFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + A +FAA R H+ N V + + ++ R+ SS AY +++ Sbjct: 64 EKFDQQMAYLFAADRHYHLYNEVDGVYKLIKQDHCHVIATRYYFSSLAY----NTNNQEE 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D + ++ + PD I LD+P+D+ L R++ + + ++ + Sbjct: 120 FDFVYGLNKRFPNPDVVIYLDIPLDVALCRLEKVTNKEVYETQEKL--------QQVKDN 171 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + I + + +D+ +S + + I + + + Sbjct: 172 YEQIFHSYDGKILRIDAQYSREQIHKQITDYLEK 205 >gi|227826765|ref|YP_002828544.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|227829399|ref|YP_002831178.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|229583935|ref|YP_002842436.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238618864|ref|YP_002913689.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|284996770|ref|YP_003418537.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] gi|227455846|gb|ACP34533.1| dTMP kinase [Sulfolobus islandicus L.S.2.15] gi|227458560|gb|ACP37246.1| dTMP kinase [Sulfolobus islandicus M.14.25] gi|228018984|gb|ACP54391.1| dTMP kinase [Sulfolobus islandicus M.16.27] gi|238379933|gb|ACR41021.1| dTMP kinase [Sulfolobus islandicus M.16.4] gi|284444665|gb|ADB86167.1| dTMP kinase [Sulfolobus islandicus L.D.8.5] gi|323473847|gb|ADX84453.1| dTMP kinase [Sulfolobus islandicus REY15A] gi|323476501|gb|ADX81739.1| dTMP kinase [Sulfolobus islandicus HVE10/4] Length = 213 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 99/217 (45%), Gaps = 16/217 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+FEGI+G+GK++ LLK +++ + DV++T + + + Sbjct: 2 KGLLIAFEGIDGSGKSSQAVLLKDWIEMR-RDVYLTEWNSSDWIHDIIKEA---KKKNTL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ A D E I P L G +++CDR++ ++YA RD +++ + +++ Sbjct: 58 TPTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKK 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDY-----FERKDVMIHEKRRQ 175 + + P+ T + + ++ L+R++ + A +D E + + Sbjct: 114 LYSFAIKPNFTFYIRVTPEVALERIKKAKRKIKPQEAGIDILGELPLEEGFLKYQGMVVE 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I+ IA+ + + +D + V +I I+ E + Sbjct: 174 IYDKIAKEESN-FITIDGNRPLKDVQMDIRKILGEYI 209 >gi|195436525|ref|XP_002066218.1| GK22056 [Drosophila willistoni] gi|194162303|gb|EDW77204.1| GK22056 [Drosophila willistoni] Length = 209 Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 82/216 (37%), Gaps = 19/216 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCG 58 M G FI FEG + +GKTT LL LQ P + + L Sbjct: 1 MQRGAFIVFEGCDRSGKTTQSRLLVEKLQANGVSTVHLNFPERKSSQIGQVINSYL--TN 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E ++F+A R +H+ N +R L G L+ DR+ S AY + L L+ Sbjct: 59 SQDLPDEVIHLMFSANRWEHL-NRMRKQLEAGTTLVVDRYSYSGVAYTVAKG----LDLN 113 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + PD L +D KR S + +E+ + K +F Sbjct: 114 WCYAPERGLLKPDAVFYLKTELDELAKR--------GSYGTERYEK--LEFQRKVSSVFD 163 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + H ++++ + + I I +L+++ Sbjct: 164 CLYERESSYWHRLNASDKVEDLHQQIAQISEKLLEQ 199 >gi|303319671|ref|XP_003069835.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240109521|gb|EER27690.1| thymidylate kinase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320034114|gb|EFW16059.1| thymidylate kinase [Coccidioides posadasii str. Silveira] Length = 228 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 14/220 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ AGK+T ++L L+ K ++ R P T + L G Sbjct: 14 MARGALIVIEGLDRAGKSTQCAILVDKLREKGHETKYIRFPDRTTSIGKIIDGYL-RGET 72 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A ++F+A R + + + IR + G ++ DR+ S Y + +++ L L+ Sbjct: 73 QLDDHAIHLLFSANRWE-LASQIRQDISNGISIVIDRYSYSGAVYSAAK-NNRELSLEWA 130 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD L++ + R L+ +E + + + ++F + Sbjct: 131 WQSEIGLPRPDLWFFLNISPEKAESR--------GGYGLERYENVTLQL--RVGELFKSM 180 Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + + I+D+ S + VA +I V V PL Sbjct: 181 QGMENNEEMRIIDANQSKEQVARDISAQVLAAVDSIEGPL 220 >gi|116805954|emb|CAL26356.1| CG5757 [Drosophila melanogaster] gi|116805960|emb|CAL26359.1| CG5757 [Drosophila melanogaster] gi|116805962|emb|CAL26360.1| CG5757 [Drosophila melanogaster] gi|116805964|emb|CAL26361.1| CG5757 [Drosophila melanogaster] gi|116805966|emb|CAL26362.1| CG5757 [Drosophila melanogaster] gi|116805968|emb|CAL26363.1| CG5757 [Drosophila melanogaster] gi|116805972|emb|CAL26365.1| CG5757 [Drosophila melanogaster] gi|116805974|emb|CAL26366.1| CG5757 [Drosophila melanogaster] gi|116805976|emb|CAL26367.1| CG5757 [Drosophila melanogaster] Length = 211 Score = 152 bits (384), Expect = 4e-35, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 119 APERGLIKPDAVFYLRSPP--------NDLTHRGQYGKERYEK--VEFQGRVAEVFDRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|170097605|ref|XP_001880022.1| predicted protein [Laccaria bicolor S238N-H82] gi|164645425|gb|EDR09673.1| predicted protein [Laccaria bicolor S238N-H82] Length = 228 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 54/235 (22%), Positives = 94/235 (40%), Gaps = 29/235 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG++ +GKTT SLL L+ + + + P T L E Sbjct: 5 FIVIEGLDRSGKTTQTSLLHTRLEAEGIQAKLMKFPDRTTVIGQMIDSYL-RSDSELDDH 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-----SQHLFLDSL 120 ++F+A R + + + I L G ++CDR+ S A+ + S L + Sbjct: 64 VIHLLFSANRWE-LASYITQLLEAGTPIICDRYAFSGIAFSASKGIPSSTPSPKLPYEWC 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD + LD+ + R LR + +E++++ + R IF + Sbjct: 123 RSPDIGLPAPDLVLFLDIAPE--------RAKLRGGYGEERYEKEEL--QARVRGIFQRL 172 Query: 181 ---ARNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQKR----VSPLSSKK 223 +N+ R VD+ + VA + ++V LV R V+ L S K Sbjct: 173 GSEMQNETQRPVRPNWVTVDAGRERKVVANEVWSLVEPLVINRIDDPVAKLWSDK 227 >gi|170290822|ref|YP_001737638.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8] gi|170174902|gb|ACB07955.1| dTMP kinase [Candidatus Korarchaeum cryptofilum OPF8] Length = 191 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 53/213 (24%), Positives = 96/213 (45%), Gaps = 25/213 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++FEGI+GAGKTT L L T+EP + + L G E Sbjct: 1 MLVAFEGIDGAGKTTQSRRLLDKLMELGMRAIYTKEPTDGEIGKILKKALK--GEIELDQ 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++FAA R++H+ +L I++ DR+L SS AYQG L + + E++ Sbjct: 59 RTIALLFAADRIEHIR-----SLKVDGIIILDRYLLSSLAYQGAF-----LPIQWINELN 108 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +PD LD+ D+ + R++++ + R+ +L + R + Sbjct: 109 RWVRLPDIVFYLDISPDVAISRIEDKEIYH-----------SLDFLSIVRENYLKLIRVE 157 Query: 185 P--DRCHIVDSAHSFQSVATNILNIVWELVQKR 215 P +++D+ + ++ ILNI+ + +R Sbjct: 158 PWSSITYLIDAGREEEEISEEILNILLNKLGER 190 >gi|322712668|gb|EFZ04241.1| thymidylate kinase, putative [Metarhizium anisopliae ARSEF 23] Length = 257 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 87/236 (36%), Gaps = 36/236 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG++ +GKTT + LL++ + V V R P T L V + Sbjct: 21 KRGAFIVLEGLDRSGKTTQVKLLEQRFVEEGKKVRVMRFPDRTTPIGQMIDAYLKSDV-Q 79 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V+ I+ L G ++ DRF S Y + + L L + Sbjct: 80 MEDHVIHLLFSANRWEAVDQ-IKTLLAAGTTVISDRFYHSGIVYSAAK-LNPSLPLSWAR 137 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD + LDL + R + +E+ + ++ R++F ++ Sbjct: 138 APERGLPRPDVVLFLDLDEETARAR--------GGWGGELYEK--AEMQKRVRELFWGLS 187 Query: 182 -----------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R + + +VD+ S + VA I + V + Sbjct: 188 MGGKDIQGQEMLAGLGGLEGAQWRQEEEDLVVVDAGGSVEEVADRIWGTLEGRVAQ 243 >gi|195383450|ref|XP_002050439.1| GJ22153 [Drosophila virilis] gi|194145236|gb|EDW61632.1| GJ22153 [Drosophila virilis] Length = 211 Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 52/224 (23%), Positives = 82/224 (36%), Gaps = 22/224 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I FEG + GKTT L L K D T P T H L Sbjct: 5 KRGALIVFEGCDRCGKTTQNRQLFELLTGKGVDTMQTNFPDRSTAIGNVINHYL--QNNQ 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++F+A R + + N I+ L+ G ++CDR+ S AY + L + Sbjct: 63 ELSDEVIHLLFSANRWERM-NSIKKDLLAGTTVICDRYAYSGVAYSVAKG----LDFNWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD L D + R + + +E+ + K QIF Sbjct: 118 WAPEIGLLKPDAVFYLKATPDE--------LTTRGNYGEERYEK--LDFQRKVGQIFDRF 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 + H +++ S Q + I IV + +K + L+ Sbjct: 168 SEKDSSYWHTFEASKSQQELHAQIAIVAEKIVMQSAEKPLGKLA 211 >gi|71394067|gb|AAZ32106.1| thymidilate kinase [uncultured euryarchaeote Alv-FOS5] Length = 212 Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 29/224 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGV 59 MN +FI FEGI+ +GK T LL + L++K + V++ P P + + L Sbjct: 1 MN--MFIVFEGIDASGKETQAKLLAKALKKKGHKVYMVDFPNYKNPIGKMIKKFL--DKK 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E E A+++AA R + I AL + KI++ DR+ S+ AYQG S + Sbjct: 57 VELDVETRALLYAADRRYEL-KGITKALDDNKIVIADRYCYSNIAYQG----SLGANISW 111 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L + V PD LD+P L+R + D +E K E+ R+ + + Sbjct: 112 LASLDATLVFPDLVFYLDIPAKESLRRRTRK---------DRYESK-REFLERVRETYTN 161 Query: 180 IA-------RNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214 +A D VD + IL V + + Sbjct: 162 MATGNMRPFEKYKDYAEWITVDGTLPIDIIHKEILMQVEMRLPR 205 >gi|223967381|emb|CAR93421.1| CG5757-PA [Drosophila melanogaster] gi|223967389|emb|CAR93425.1| CG5757-PA [Drosophila melanogaster] gi|223967393|emb|CAR93427.1| CG5757-PA [Drosophila melanogaster] Length = 211 Score = 151 bits (383), Expect = 5e-35, Method: Composition-based stats. Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ N ++ L+EG L+ DR+ S AY + L D Sbjct: 64 LPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGVAYSAAKG----LDFDWCY 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 119 APERGLIKPDAVFYLRSPP--------NDLTYRGQYGKERYEK--VEFQGRVAEVFDRIC 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I +I EL+ K Sbjct: 169 SKEGSYFHQFDARQSVEDLHAQIASITEELLPK 201 >gi|291533518|emb|CBL06631.1| thymidylate kinase [Megamonas hypermegale ART12/1] Length = 224 Score = 151 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 19/228 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---- 56 M G I E +G GK T LL L + Y V P A + L Sbjct: 1 MVKGKLIIIEAGDGCGKATQTKLLYDRLNQAGYKVKKVEYPDYESPACTPVKMYLQGEFG 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 VD+ A A +++FA R + EG I+L DR+ S+ +Q + + Sbjct: 61 GHVDDVNAYAASVLFAVDRYASYRMKWKKDYEEGTIILADRYTTSNMVHQAVKIEDSKMR 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL L + + +PD I L++P DI K + NR +++ D E+ D Sbjct: 121 DEFLSWLWDTEFTKMGLPVPDKVIFLNMPPDISNKLIDNRAK-KDNRKKDIHEQ-DKNYL 178 Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 EK +++ ++A IV+ A + + + ++ + L++ Sbjct: 179 EKCHEVYQEMANRYD--WDIVECAKDNQLRTIEEIHEDVWQKIQGLIK 224 >gi|116328926|ref|YP_798646.1| thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122283291|sp|Q04YY2|KTHY_LEPBL RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|116121670|gb|ABJ79713.1| Thymidylate kinase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 205 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 14/205 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +F+ FEGI+G+GK+T L L + EP + R L G + Sbjct: 5 KPIFVVFEGIDGSGKSTLCKSLTEKLTERGIPSVNFTEPTNFETGKYLRKFL--RGEIDL 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + F R + + I P+L GK +L DR++ S+ AYQ D ++ + Sbjct: 63 ERKEQIDAFLNDREESLRQNILPSLESGKNVLLDRYMYSTAAYQSGDDLLPETIIE--KN 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +PD LDL I L+R+ R +E FE + EK R + I Sbjct: 121 LKKNFKIPDLLFYLDLNPAIALERLSQRKENKE-----RFE--TLAQLEKIRSAYNRIL- 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNI 207 P +D + L I Sbjct: 173 --PKETIRIDGVKGPDEIVQECLEI 195 >gi|312128607|ref|YP_003993481.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] gi|311778626|gb|ADQ08112.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] Length = 240 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 90/221 (40%), Gaps = 18/221 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + +G++T I LLK +L+ Y V T + + Sbjct: 20 KRGKLIVIEGPDCSGRSTQIELLKEWLEASGYAVLNTGLKRSRLVGDVIERA---KKGNT 76 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G ++++ D +EN I PAL G ++L DR++ + A RD + + L+ Sbjct: 77 LGKTTLSLLYCCDFADQLENQIIPALSAGYVVLADRYIFTLMA----RDIVRGADKEWLK 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRY--------SLRESACLDYFERKDVMIHEKR 173 + ++PD I LD+ +DI L R +Y + D FE H Sbjct: 133 RLLGFAIVPDLIIYLDVSIDILLTRTFQKYGHLDYWESGMDIQLSADMFESFKK-YHFLL 191 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ + ++A+ ++D + I + +++Q+ Sbjct: 192 KKEYEEMAKEY--NFVVIDGNQGVGIIQKRIREEILKILQE 230 >gi|272761235|gb|ACZ95829.1| thymidylate kinase [Jujube witches'-broom phytoplasma] Length = 217 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKTT I +++ L+++ +V + G + + R + L+ + Sbjct: 5 KLIVFEGLDGSGKTTLIQKIRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT--NAQLKP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ A E I+P L KI+L DR+L S++AYQ + + ++ Sbjct: 63 LTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNY-QLFNLLN 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 Q + PD T+ L + +GL+R QN+ + LD E + + Q + Sbjct: 122 KQFIKPDMTVYLKIKPQLGLERKQNQKDHK----LDVIETHPLSYLRQVSQGY 170 >gi|229578187|ref|YP_002836585.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|229583122|ref|YP_002841521.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] gi|228008901|gb|ACP44663.1| dTMP kinase [Sulfolobus islandicus Y.G.57.14] gi|228013838|gb|ACP49599.1| dTMP kinase [Sulfolobus islandicus Y.N.15.51] Length = 213 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 100/217 (46%), Gaps = 16/217 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+FEGI+G+GK++H LLK +++ + DV++T + + + Sbjct: 2 KGLLIAFEGIDGSGKSSHAVLLKDWIEMR-RDVYLTEWNSSDWIHDIIKEA---KKKNTL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ A D E I P L G +++CDR++ ++YA RD +++ + +++ Sbjct: 58 TPTTFSLIHATDFSDRYERFILPMLKSGFVVICDRYIYTAYA----RDVVRNVDFNWVKK 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDY-----FERKDVMIHEKRRQ 175 + + P+ T + + ++ L+R++ + A +D E + + Sbjct: 114 LYSFAIKPNFTFYIRVTPEVALERIKKAKRKIKPQEAGIDILGELPLEEGFLKYQGMVVE 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I+ IA+ + + +D + V +I I+ E + Sbjct: 174 IYDKIAKEESN-FITIDGNRPLKDVQMDIRKILGEYI 209 >gi|288921143|ref|ZP_06415431.1| thymidylate kinase [Frankia sp. EUN1f] gi|288347452|gb|EFC81741.1| thymidylate kinase [Frankia sp. EUN1f] Length = 859 Score = 150 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 52/157 (33%), Positives = 77/157 (49%), Gaps = 5/157 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++GLFI+ EG AG + LL+ +L +V V RE GTP + + R LL Sbjct: 598 HAGLFITIEGDTAAGAEGQLDLLQEWLAASGREVVVVREKTGTPISASVRE-LLDAPSTR 656 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A++ AA R + V +I PAL G I+L DR+ SS A+QG L +L Sbjct: 657 PHFRTVALLDAADRAEQVARIIEPALARGAIVLADRYAASSKAFQGADPRLDQDELAALA 716 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 + + ++PD T++LDLP + R R + R Sbjct: 717 QWATHSLLPDVTVLLDLPTE----RKAPRPTTRPRRA 749 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 11/49 (22%), Positives = 22/49 (44%) Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 H++ R+ F IA P R VD+ + I +++ E +++ Sbjct: 806 SAAYHQRVREQFRRIAAEDPARHVTVDATLPAPELHRQIRSVITERIRR 854 >gi|302851470|ref|XP_002957259.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f. nagariensis] gi|300257509|gb|EFJ41757.1| hypothetical protein VOLCADRAFT_107597 [Volvox carteri f. nagariensis] Length = 546 Score = 150 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 90/218 (41%), Gaps = 20/218 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 + G I FEG + GKTT L L+ + D + R P T +A L+ Sbjct: 11 SRGALIVFEGGDRCGKTTQCRKLVERLRSQGVDAVMWRFPDRSTSIGQAINAYLVEQSH- 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++FAA R++ E ++R L+ G+ L+ DR+ S AY + HL +D Sbjct: 70 -MDDAVAHLLFAANRMEKREEMLR--LLSGRTTLVVDRYSYSGVAYTAAK-GVPHLSMDY 125 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + V D I +D+ + R + +E+ V +K + F Sbjct: 126 CRAVEVGLPAADLVIFMDMTAEATAAR--------GGYGQERYEK--VDFQQKVMKAFEA 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +R ++D++ + + + + +VQ+ ++ Sbjct: 176 LRD---ERWAVIDASGTIDDIHQKVAAVAEPVVQRALA 210 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 76/242 (31%), Gaps = 65/242 (26%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G FI FEGI+ GK+T +LL L+R+ V P + + L G D Sbjct: 270 SRGAFIVFEGIDRCGKSTQSNLLVDHLRRRGVKVEHWCFPDRSTRIGQTINDYLHNGADH 329 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F A R + R+ S AY + HL +D + Sbjct: 330 -DDTAIHLLFTANRFE------------------KRY--SGVAYTAAK-GVPHLSMDYCR 367 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--------- 172 + V D I +D+ + R + +E+ + K Sbjct: 368 AVEVGLPAADLVIFMDMTAEEAAAR--------GGFGAERYEK--LEFQRKASLGIVTGA 417 Query: 173 ---------------------RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 Q + + + +D+ + + +++ V + Sbjct: 418 WRRLVVTPAILMPLSCRPTKQVAQQYAALKDSH---WLRLDATQQPECLQQQVVDAVLPV 474 Query: 212 VQ 213 V+ Sbjct: 475 VE 476 >gi|78777324|ref|YP_393639.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251] gi|123550247|sp|Q30RH7|KTHY_SULDN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78497864|gb|ABB44404.1| thymidylate kinase [Sulfurimonas denitrificans DSM 1251] Length = 191 Score = 150 bits (381), Expect = 9e-35, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 15/204 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I+ L+ D +T+EPGGT A + R ++L+ + Sbjct: 1 MYIAIEGIDTAGKSTQIAKLQEHFS----DAIITKEPGGTEAGKEIREIVLNAKIK--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R +H++ VI P L K+++ DR + S AY + + L + Sbjct: 55 KAEFLLFLADRAEHIQEVIEPNLS--KMIISDRSVVSGVAYALVQGEISETAILHLNRFA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P +L L + R+ + LD E + + K + + + Sbjct: 113 TGGIYPQKIFLLQLTNEELSLRLSQKK-------LDGIELRGIEYLLKIQDALIKASNLL 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 ++D+ + S+ ILN + Sbjct: 166 NIELVLIDATKNIDSITQEILNNI 189 >gi|153006218|ref|YP_001380543.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] gi|152029791|gb|ABS27559.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] Length = 564 Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 10/193 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 +F+SFEGI+G+GKT+ + + L+ + V RE G G+ A R + + E Sbjct: 1 MFVSFEGIDGSGKTSLSNQVCERLRAAGHSVLHAREKGILGSAVARRVRELTRDARLLEM 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E + A ++ ++RPAL G I++ DR L S A +++ Sbjct: 61 SPRTELFLNLARETQQLDEIVRPALAGGGIVVADRSLHSLVALAAAGRGLPREEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVM---IHEKRRQIF 177 + PD +++D+ D L R++ R D E RK + + + R+ Sbjct: 121 VGAAGTWPDLVVLVDVDPD--LARLRKRVGKILEGR-DRDEESRKGLAGAGLQVRVRRHL 177 Query: 178 LDIARNQPDRCHI 190 A P R + Sbjct: 178 RAEAERDPSRWIV 190 >gi|330835059|ref|YP_004409787.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina Ar-4] gi|329567198|gb|AEB95303.1| thymidylate kinase / thymidylate synthase [Metallosphaera cuprina Ar-4] Length = 211 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 93/217 (42%), Gaps = 17/217 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I+ EGI+G+GK++ LLK +L+ K D ++T E + + Sbjct: 2 RGHIIAMEGIDGSGKSSQAKLLKDWLENK-VDTYLTEWNSSDWIHEVIKEA---KKKNLL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ A D E +I P G ++ DR+ +++A RDS + + ++ +++ Sbjct: 58 TPLTFSLIHATDFADRYERLILPMYRIGFTVVSDRYFYTAFA----RDSVRGVNINWVRQ 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDYF-----ERKDVMIHEKRRQ 175 + + PD T + + ++ L R++ R + A D F E + + Sbjct: 114 LYSYAMKPDVTFFIRVTPEVALARLRENKRGIKPQEAGSDVFPDLDPEEGFLKYQGLVLE 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ +A + I+D S + + I V E++ Sbjct: 174 MYDKMASEEG--FVIIDGNKSPREIQIEIRRKVGEII 208 >gi|294626717|ref|ZP_06705312.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667167|ref|ZP_06732390.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598965|gb|EFF43107.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603066|gb|EFF46494.1| thymidylate kinase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 227 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 39/233 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLEAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG L+ Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R IF + P + H+VD++ SV I+ + R+S ++ D Sbjct: 163 RCRTIFAAL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212 >gi|328948690|ref|YP_004366027.1| thymidylate kinase [Treponema succinifaciens DSM 2489] gi|328449014|gb|AEB14730.1| Thymidylate kinase [Treponema succinifaciens DSM 2489] Length = 214 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 27/219 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI FEGI+GAG TT + +LK + + T EP + + R +L G + E Sbjct: 6 FIVFEGIDGAGTTTQLEILK----SRTPEFLFTAEPTSSETGKFLRKMLK--GEIQVTNE 59 Query: 66 AEAIVFAAARLDHVE-----------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 A +FAA R +H+ I+ A +GKI++ DR+L SS AYQ S Sbjct: 60 TAAYIFAADRNEHINGNCIIEENKLITGIKSACEKGKIVVSDRYLFSSLAYQSIDCS--P 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +L + +P D+ +I LKR+ +R +D+ +R +EK Sbjct: 118 EIPRTLNKF---FPLPRLLFFFDIEPEISLKRISSRGQKEIYEKIDFLKRTKEE-YEKVL 173 Query: 175 QIFL--DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +I++ + +D+ + ++ I + + Sbjct: 174 AEYNGTEISKGM--KIVRIDATADKEKISRKIEEEINSI 210 >gi|325923095|ref|ZP_08184788.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865] gi|325546410|gb|EGD17571.1| thymidylate kinase [Xanthomonas gardneri ATCC 19865] Length = 227 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 97/233 (41%), Gaps = 39/233 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARSLATTLEAAGAHVVLSKEPTNGPWGTKLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G+I++ DR+ S AYQG L+ Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGEIVILDRYFPSMVAYQGAAGLPLDALLER-NA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R IF + P + H+VD++ SV IV + +R+S ++ D Sbjct: 163 RCRAIFNTL--QLPGK-HVVDASADADSVLRQAHAIVVAALAERLSDDAAHTD 212 >gi|148264686|ref|YP_001231392.1| dTMP kinase [Geobacter uraniireducens Rf4] gi|146398186|gb|ABQ26819.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 227 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 18/213 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G ++ EG++G+GK+T + LLKR+L+ + V T +A Sbjct: 11 GKLVAVEGLDGSGKSTQLYLLKRWLELRGLKVFFTEWNSSVIVKKATSK---GKKRHLLT 67 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ AA D E I P L G ++LCDR+ +++A R S +L SL E Sbjct: 68 PTTFSLIHAADFADRYERQILPLLKAGYLVLCDRYFYTAFARDAVRGCS-CTWLRSLYEF 126 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESAC-------LDYFERKDVMIHEKRRQ 175 + PD T+ D P+ + L R+ R L+ D E + E+ + Sbjct: 127 AR---RPDLTLFFDTPLPVALSRILAGRPQLKYHEAGMDLGLSADPQESFRL-FQERIYR 182 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +L + +D + + + + ++V Sbjct: 183 EYLAM--RDDCSFVTIDGSATVEDQQKVVRDLV 213 >gi|45358597|ref|NP_988154.1| thymidylate kinase [Methanococcus maripaludis S2] gi|59798295|sp|Q6LYF7|KTHY_METMP RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|44921355|emb|CAF30590.1| Thymidylate kinase [Methanococcus maripaludis S2] Length = 199 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 50/228 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI FEGI+G GKTT L+ L T EP ++ R +L Sbjct: 1 MNK--FIVFEGIDGCGKTTQAKLVAEKLNAN-----FTFEPTDGKIGKSIREIL---AGS 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E A++FAA R++HV + + ++ DR++ SS YQ F+ + Sbjct: 51 KCNKETLALLFAADRVEHVSKIEEDL--KNAHVVSDRYVYSSIVYQMT-QGIPKDFIYKI 107 Query: 121 QEISVQEVMPDCTIILDLP---------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + + +P ++ LKR+++R + FE+ + + Sbjct: 108 NDYAK------------IPDLVVLLDVDLNEALKRMESREK-------EIFEK--LEFQK 146 Query: 172 KRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212 K ++ + ++ ++ + ++D ++ V ILN + + + Sbjct: 147 KIKEGYYNLINSENGKFMPKYGFIVIDTTSKPIDQVFNEILNAIVDKI 194 >gi|39960728|ref|XP_364612.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15] gi|145010950|gb|EDJ95606.1| thymidylate kinase, putative [Magnaporthe oryzae 70-15] Length = 240 Score = 149 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 87/230 (37%), Gaps = 37/230 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GKTT + LL++ +V V R P TP + L S + Sbjct: 12 RGALIVLEGLDRSGKTTQVQLLEKRFLDLGRNVKVMRFPDRTTPIGQMIDGYLKSQ--VD 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + + I L G +LCDR+ S Y + + L L + Sbjct: 70 MDDHVIHLLFSANRWEAAKQ-ITDLLSAGTTVLCDRYYYSGMVYSAAKQN-PALPLSWAR 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD + LDL + R + +ER + + R++F ++ Sbjct: 128 APEVGLPRPDLVLFLDLTEEQAKAR--------GGWGDELYER--AEMQRRVRELFWGLS 177 Query: 182 RNQPDRC-------------------HIVDSAHSFQSVATNILNIVWELV 212 R H+VD++ S ++V I +V V Sbjct: 178 M---GRIEAGGGSQREERARQEEEDLHVVDASPSVEAVCEEIWKVVEPRV 224 >gi|269797674|ref|YP_003311574.1| thymidylate kinase [Veillonella parvula DSM 2008] gi|269094303|gb|ACZ24294.1| thymidylate kinase [Veillonella parvula DSM 2008] Length = 228 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 83/227 (36%), Gaps = 19/227 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T LL L ++ + V P A + L+ V Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R G I++ DR+ S+ +Q + + F Sbjct: 62 HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDSKERTAF 121 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L++ Q+ PD +LD+P+++ + R D E + Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHTYLVAV 180 Query: 174 RQIFLDIARNQP-DRCHIVD-------SAHSFQSVATNILNIVWELV 212 + ++ + R VD + + + + ++ ++V L+ Sbjct: 181 HDAYEELVKRYQWHRIPCVDKAKSSQYTLRTIEEIHNDVYSVVENLL 227 >gi|302410089|ref|XP_003002878.1| thymidylate kinase [Verticillium albo-atrum VaMs.102] gi|261357902|gb|EEY20330.1| thymidylate kinase [Verticillium albo-atrum VaMs.102] Length = 285 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 88/235 (37%), Gaps = 36/235 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 + G + EG++ +GKTT + LL++ V V R P TP + L S Sbjct: 50 ITRGALVILEGLDRSGKTTQVKLLEQRFVELGKKVKVMRFPDRSTPIGQMIDAYLKSS-- 107 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E ++F+A R + V+ IR L G +LCDR+ S Y + + L L Sbjct: 108 VEMDDHVIHLLFSANRWEAVKT-IRQLLASGTTVLCDRYYHSGIVYSAAKHN-PSLSLHW 165 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + V PD + LDL R + +ER + + R++F Sbjct: 166 ARAPDVGLPRPDLVLFLDLDEATAKSR--------GGWGGELYERG--EMQRRVRELFWG 215 Query: 180 IA---------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +A R + + +VD+ S + VA I V V+ Sbjct: 216 LAMGRIGADGGLGDEDRRVDREFRQEEEDLVVVDAGASVEEVAEGIWEKVQPRVE 270 >gi|321472932|gb|EFX83901.1| hypothetical protein DAPPUDRAFT_315306 [Daphnia pulex] Length = 148 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 5/140 (3%) Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 AAAR +H+ +++ PAL EGK +LCDRF DS++AYQG F+++L ++++ P Sbjct: 1 MAAARREHLRHLVWPALEEGKWVLCDRFSDSTFAYQGFGHELGVSFVETLNQLTMGNFQP 60 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 D T I L + GL R + D +ER H + + +L + + RC Sbjct: 61 DLTFIFQLSEEAGLARKKESLVSE-----DRYERFPEEFHRRVSKGYLALLEAESQRCVP 115 Query: 191 VDSAHSFQSVATNILNIVWE 210 + + S + +A +I + E Sbjct: 116 LSAHTSIEVIADHIWRTLAE 135 >gi|213409950|ref|XP_002175745.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275] gi|212003792|gb|EEB09452.1| thymidylate kinase [Schizosaccharomyces japonicus yFS275] Length = 209 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 12/210 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G F+ FEG++ +GK+T LLK+ L + + R P GT + L + ++ Sbjct: 2 RGKFVVFEGLDRSGKSTQAELLKKALIDRGQRAILLRFPDRGTTIGKQIDAYLKNK--NK 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA ++F+A R + + + I AL +G + DR+ S A+ + + D + Sbjct: 60 LPDEAIHLLFSANRWE-LASTIEAALADGVHCIVDRYSFSGVAFSAAKG----MDWDWCK 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + + +I KR E L F+R + RQ F+ Sbjct: 115 QPERGLPSPDIVLFFQVDPNIASKRA---GFGNERYELPVFQRTVAEKYALLRQEFVK-E 170 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R D ++D S + V IL I L Sbjct: 171 RKNDDSWLMIDGNQSIEQVHLKILTIFGSL 200 >gi|146304784|ref|YP_001192100.1| thymidylate kinase [Metallosphaera sedula DSM 5348] gi|172046954|sp|A4YIC4|KTHY_METS5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|145703034|gb|ABP96176.1| thymidylate kinase [Metallosphaera sedula DSM 5348] Length = 196 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 31/222 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN + EGI+ +GKTT L L + + V +T+EP + + +L Sbjct: 1 MN---LVVIEGIDASGKTTLAKRLAESLSPR-FKVLLTQEP----FTDDIKQLL--EKYQ 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A++F+A R HV+ + + +++ DR+ S+ AYQG +L+SL Sbjct: 51 WKDQVLLALLFSADRRIHVKWMESQNV---DLIISDRYFFSTLAYQGV--GVDRTWLESL 105 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 I +P+ TI+LD+PV++ L+R++N+ LD FE K +H+ R+ +L + Sbjct: 106 SSI---FPLPNLTILLDVPVNVALERLRNKRD-----SLD-FEEKRKSLHQ-VRENYLSL 155 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 AR I+D + + +I ELVQ +S +S+ Sbjct: 156 ARRY--NFKILDGTLPLEKLT----SISLELVQGLLSSSTSR 191 >gi|85057502|ref|YP_456418.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789607|gb|ABC65339.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 210 Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 7/173 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKTT I +++ L+++ ++V + G + + R + L+ + Sbjct: 2 KIIVFEGLDGSGKTTLIQKIRKQLEKQGHEVINLQGLGSSSIGQPLRDIFLT--NSQLKP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ A E I+P L KI+L DR+L S+ AYQ + + ++ Sbjct: 60 LTRYLLSFANMQQIQEEEIKPHLATNKIILIDRWLGSNLAYQAYPHNIDKNY-QLFNLLN 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 Q + P+ T+ L + +GL+R QN+ + LD E + + Q + Sbjct: 119 KQFIKPNMTVYLKIKPQLGLERKQNQKDHK----LDVIETHPLSYFHQVSQGY 167 >gi|255322189|ref|ZP_05363335.1| thymidylate kinase [Campylobacter showae RM3277] gi|255300562|gb|EET79833.1| thymidylate kinase [Campylobacter showae RM3277] Length = 192 Score = 148 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 14/206 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+GAGK+T I+ L VT+EPGGT E R +LL ++ Sbjct: 1 MYILFEGIDGAGKSTQIARLA----AAYTQAIVTKEPGGTKLGENLREILL--KENDLDK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H +I+P L K++L DR S AY + L +L + + Sbjct: 55 RAEILLFLADRAEHFGKIIKPNLD--KMILSDRGFVSGMAYALAGGNFSFEELLNLNKFA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +Q P + R+ R A +D E + + + +I + Sbjct: 113 LQGNFPQKIVFFKADESTLRSRLGLR------AQMDGIEARGFEYLLRVQDAMEEILQKL 166 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 + +A + + I + + Sbjct: 167 GVCYVTIGAAWDEEKITNLIKEFIND 192 >gi|21244732|ref|NP_644314.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306] gi|23821767|sp|Q8PFG7|KTHY_XANAC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21110424|gb|AAM38850.1| thymidylate kinase [Xanthomonas axonopodis pv. citri str. 306] Length = 227 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 94/233 (40%), Gaps = 39/233 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLAATLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG L+ Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R IF + P + H+VD++ SV I+ + R+S ++ D Sbjct: 163 RCRTIFAAL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHTD 212 >gi|322378354|ref|ZP_08052810.1| thymidylate kinase [Helicobacter suis HS1] gi|322380924|ref|ZP_08054995.1| thymidylate kinase [Helicobacter suis HS5] gi|321146647|gb|EFX41476.1| thymidylate kinase [Helicobacter suis HS5] gi|321149211|gb|EFX43655.1| thymidylate kinase [Helicobacter suis HS1] Length = 206 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 20/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+ +GK+T I+LLK+ + T+EPGGTP +A R +L + + Sbjct: 8 MFIAIEGIDTSGKSTQINLLKQTFP----NALFTKEPGGTPLGQALREKILD---HKLSS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 A+ ++F A R H+E VI+P +++ DR L S AY +D L +I Sbjct: 61 HAQFLLFLADRSLHIEEVIKP--NSHRLIFSDRSLISGLAYAP---CLLQEAID-LHKIH 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + EV+PD +L L KR+ + S +D E + V E ++ L+ + Sbjct: 115 GLLEVIPDLVFVLKLDHTELKKRLDKKTS------MDCIEAQGVAFLEHTQKRLLEACQI 168 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +I+D++ S S+ +IL + L+ Sbjct: 169 LKLKTYILDASKSPSSIHQSILEKLESLL 197 >gi|196234358|ref|ZP_03133186.1| dTMP kinase [Chthoniobacter flavus Ellin428] gi|196221550|gb|EDY16092.1| dTMP kinase [Chthoniobacter flavus Ellin428] Length = 245 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 91/218 (41%), Gaps = 18/218 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG ++ EG++G+GK+T I L+KR+L+ + Y V T + + Sbjct: 27 SGKLLAVEGLDGSGKSTQIYLVKRWLELEGYRVFFTEW---NSSILVKKSTSKGKKRQLL 83 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ A D E I P L G ++LCDR++ ++ A RD+ + + D +++ Sbjct: 84 TPTTFSLIHATDFADRYERQILPLLRAGYLVLCDRYIFTALA----RDAVRGVDRDWVEQ 139 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRV-QNR-------YSLRESACLDYFERKDVMIHEKRR 174 + V+PD T+ +P++ L R+ + R L D +E + K Sbjct: 140 LYSFAVLPDITLYFRVPLETSLNRILEGRPALKYHEAGLDMGWSTDPYESFRI-FQGKVY 198 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + VD+ + N++ E + Sbjct: 199 AEYESMREKFG--FVPVDATEEIHVQQAKVRNLIKEKI 234 >gi|303277967|ref|XP_003058277.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460934|gb|EEH58228.1| predicted protein [Micromonas pusilla CCMP1545] Length = 214 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 16/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG++ GKTT + L L+ + + R P T + + L + Sbjct: 7 RGAFILFEGVDRCGKTTQSTKLVEALKSSGVNAELWRYPDRTTSMGQMINSYLQSKTE-M 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++FAA R + + L EG L+ DR+ S A+ + L L+ + Sbjct: 66 DDGAIHLLFAANRWE-KRAAMEAKLAEGVTLVVDRYSYSGVAFTAAK-GIPGLDLEWCKS 123 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V + PD + L++PV+ R + +E D+ + R F + Sbjct: 124 PEVGLLRPDAVLYLNMPVEAAAAR--------GGFGEERYETSDL--QKAVRANFDKLRE 173 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D IVD+ + V + + V K Sbjct: 174 ---DWWTIVDATGTVDEVHAACRAVADDAVAK 202 >gi|195027421|ref|XP_001986581.1| GH20447 [Drosophila grimshawi] gi|193902581|gb|EDW01448.1| GH20447 [Drosophila grimshawi] Length = 211 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 17/223 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG + +GKTT L L K D+ P T + L + Sbjct: 5 KRGAFIVFEGCDRSGKTTQSRHLSSVLTSKGVDIKQINFPDRTTTIGGMINAYL-TNTQD 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R + V++ I+ L+ G ++CDR+ S AY + + D Sbjct: 64 LKDEVIHLLFSANRWECVDS-IKKDLLAGTTVICDRYSYSGAAYSAAKG----VDFDWCC 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L +D + R S + +E+ + K + F + Sbjct: 119 APDRGLLEPDAVFYLKANLDE--------LTSRGSYGEERYEK--LDFQRKVGEQFDRLY 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS-PLSSKK 223 + H++D++ S Q + I + ++Q+ PLS+ K Sbjct: 169 AQRSSYWHLLDASKSLQELQDQIAAVADGVLQQAAEQPLSTIK 211 >gi|223996301|ref|XP_002287824.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976940|gb|EED95267.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 276 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 24/226 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGV 59 G FI EG++ GKTT +SLL + L + R P + + + L S Sbjct: 34 KRGAFILLEGVDRCGKTTQVSLLVKHLLSLSLATVAYRFPDRSTQVGSLINSYLTSSTPT 93 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----- 114 A ++F+A R + ++ R L G ++CDR+ S A+ + Sbjct: 94 APLDDRAIHLLFSANRWEASTSLAR-TLASGTNIVCDRYAYSGVAFTSAKVEEDRGSMSG 152 Query: 115 --LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L L+ V PDC I LDL D KR + +E++D+ + Sbjct: 153 GELGLEWCIAPDVGLPAPDCVIFLDLEQDEAEKR--------GGYGGERYEKRDL--QMR 202 Query: 173 RRQIFLDIARNQPDR----CHIVDSAHSFQSVATNILNIVWELVQK 214 R+ F ++ H+VD++ S + V +++IV + +++ Sbjct: 203 VRKRFAELQSLDEQNGRVPWHVVDASQSIEEVTGELVSIVNDTIER 248 >gi|312897767|ref|ZP_07757183.1| dTMP kinase [Megasphaera micronuciformis F0359] gi|310621151|gb|EFQ04695.1| dTMP kinase [Megasphaera micronuciformis F0359] Length = 223 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 18/225 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58 G I EG +G+GK T LL+R L V P + A + L Sbjct: 2 KGHLIIIEGGDGSGKATQTELLRRHLADDGEFVKAVSYPDYDSESSALVKMYLRGDFGTD 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHL 115 D A + +A R+ E + +G I+L DR+ S+ YQ + Q Sbjct: 62 ADTINPYAASAFYAVDRIASYELKWKRFFKDGGIVLADRYTTSNMLYQMIKIPGKADQDA 121 Query: 116 FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +LD L + + PD I+LD+P+++ + + R D E+ D K Sbjct: 122 YLDWLWDFEFKKLGLPEPDAVILLDVPLEVTERLMSERTGKTGGTTGDIHEK-DREFLRK 180 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 ++ +A + +D S ++ ++ +V L+ Sbjct: 181 CHAAYVGLAAKYG--WYKIDCTREGVLRSPGAIHEDVYALVKGLI 223 >gi|16975316|pdb|1E9F|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Adp Length = 217 Score = 147 bits (373), Expect = 7e-34, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 17/223 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++GAGK+T L L + + R P + L D Sbjct: 7 RRGALIVLEGVDGAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 66 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + R L+ +E + E+ + F + Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKRGRAR------GELERYE--NGAFQERALRCFHQLM 173 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 174 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELW 216 >gi|148907170|gb|ABR16728.1| unknown [Picea sitchensis] Length = 258 Score = 147 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 81/210 (38%), Gaps = 23/210 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ +GK++ L L + + V R P T A LS D Sbjct: 53 KRGALIVLEGLDRSGKSSQCLKLASSLASQGFSVEAWRFPDRTTAMGKMISAYLSSKED- 111 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + +++ + G L+ DR+ S A+ + L L + Sbjct: 112 MDDRTIHLLFSANRWE-KRSLMEAKMKAGTSLIVDRYSYSGVAFSAAKG----LDLSWCK 166 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD + LD+ + +R + +E+ + K +++ ++ Sbjct: 167 APEVGLPAPDLVLYLDIAPEKAAER--------GGYGGERYEQ--LDFQRKVAELYTALS 216 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + IVD++ S SV I+ EL Sbjct: 217 DSA---WQIVDASLSIDSVH----KILKEL 239 >gi|171676382|ref|XP_001903144.1| hypothetical protein [Podospora anserina S mat+] gi|170936257|emb|CAP60916.1| unnamed protein product [Podospora anserina S mat+] Length = 274 Score = 147 bits (373), Expect = 8e-34, Method: Composition-based stats. Identities = 52/262 (19%), Positives = 90/262 (34%), Gaps = 64/262 (24%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ +GKTT + LL++ V V R P TP + L Sbjct: 12 TRGALIVLEGLDRSGKTTQVKLLEQRFVELGKSVKVMRFPDRTTPIGQMINSYL--TSQT 69 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++F+A R + ++I L G ++CDR+ S Y + + L L Sbjct: 70 TMSDHVIHLLFSANRWE-AASLITSLLSHGTTVICDRYYYSGIVYSAAKHN-PFLPLSWA 127 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--- 177 + V PD + LDL KR + +E+ + + R++F Sbjct: 128 RSPEVGLPRPDLVLFLDLDEQEAKKR--------GGWGGEVYEK--AEMQRRVRELFWGL 177 Query: 178 ------------LDIA----------------------------------RNQPDRCHIV 191 L+ A R + + H+V Sbjct: 178 SLGKIVGAPHSALECAPGEGAGTKGGEEEVAVGPPSAQTPDISGGVEHRFRQEEEDLHVV 237 Query: 192 DSAHSFQSVATNILNIVWELVQ 213 D++ S + VA + +V + V+ Sbjct: 238 DASASVEEVAEGVWKVVRDRVE 259 >gi|255658922|ref|ZP_05404331.1| dTMP kinase [Mitsuokella multacida DSM 20544] gi|260848872|gb|EEX68879.1| dTMP kinase [Mitsuokella multacida DSM 20544] Length = 250 Score = 147 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 82/227 (36%), Gaps = 19/227 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SC 57 G I E +G+GK T L L R+ Y VH P + + L Sbjct: 3 RKGKLIIIEAGDGSGKATQTKALYDHLCREGYRVHRIEFPDYAADSSMLVRMYLRGDFGG 62 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114 ++ A A + FA R + A G I+L DR+ S+ +Q + + Sbjct: 63 HAEDVNAYAASTFFAVDRYASYRMKWKKAYEAGAIILADRYTTSNMVHQAVKLTDRKERE 122 Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FLD L + + +PD + LD+ ++ + + R + D ER D Sbjct: 123 AFLDWLWDFEFHKLGLPVPDKVVFLDMDPEVADRLIAARAE-ETAQEKDIHER-DRAYLH 180 Query: 172 KRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + + ++A V + S ++ ++ V L++ Sbjct: 181 RCHAAYEELAAKYG--WTRVACSENGEPRSVAAIYADVYAAVRPLLE 225 >gi|260796149|ref|XP_002593067.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae] gi|229278291|gb|EEN49078.1| hypothetical protein BRAFLDRAFT_278571 [Branchiostoma floridae] Length = 215 Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 19/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GKTT L L++ + R P T A + + L + Sbjct: 5 RGALIVLEGVDHSGKTTQCMKLVEALKKHGQKAELIRFPDRTTAIGSVINDYLGNKCE-L 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++F+A R + V + L EG L+ DR+ S A+ + L + LQ Sbjct: 64 HDFAIHLLFSANRWEAVPR-MEKLLSEGTSLIVDRYAYSGVAFTAAKG----LDMRRLQH 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD + L LP + KR + +E+ D +K + F + Sbjct: 119 SDIGLPRPDLVMYLTLPPEEAAKR--------SEYGGERYEQTD--FQKKVAENFKVLQE 168 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + I+++ + + + T+IL + E + K Sbjct: 169 DD---WKILNANQTIEELHTHILQLAKEAITK 197 >gi|32266861|ref|NP_860893.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449] gi|46576464|sp|Q7VGF9|KTHY_HELHP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|32262913|gb|AAP77959.1| thymidylate kinase [Helicobacter hepaticus ATCC 51449] Length = 195 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 19/211 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---SCGVDE 61 ++++ EG++ GK+T I LLK + + T+EPGG+ E R ++L Sbjct: 1 MYVAIEGVDTCGKSTQIQLLKAYYPQ----AVFTKEPGGSIIGEHIRDLVLFAPKKYGFT 56 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++F A R H V+ P + K+++ DR + S AY D +Q + +L Sbjct: 57 LDERAELMLFLADRAQHYAQVLLPH--KDKLIISDRSVISGIAYAKSIDIAQSI---ALN 111 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + ++ ++PD +IL+L +R+ ES D E + + + ++ F ++ Sbjct: 112 DFVLRGMLPDLVVILELDEKSLKERI-------ESKSHDNIESRGISYMLEIQKCFKNVV 164 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++D+ + + I + LV Sbjct: 165 TQMNLKYIVLDATQDKERICAQIREHINILV 195 >gi|238019601|ref|ZP_04600027.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748] gi|237863799|gb|EEP65089.1| hypothetical protein VEIDISOL_01470 [Veillonella dispar ATCC 17748] Length = 228 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 39/229 (17%), Positives = 80/229 (34%), Gaps = 23/229 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T LL L ++ + V P A + L+ V Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116 + + ++A R G I++ DR+ S+ +Q + + F Sbjct: 62 HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDLKERTAF 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L++ PD +LD+P+++ + R D E + Sbjct: 122 LDWLEDFEFNKFGLPTPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHQYLVAV 180 Query: 174 RQIFLDIARNQPDRCHIV------DSAH----SFQSVATNILNIVWELV 212 + ++ + H + +++ + + + ++ V L+ Sbjct: 181 HDAYEELVKRYG--WHRIPCATKDNASQYALRTIEEIHNDVYQAVVNLL 227 >gi|145334853|ref|NP_001078772.1| ZEU1 (ZEUS1); ATP binding / thymidylate kinase [Arabidopsis thaliana] gi|332009807|gb|AED97190.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana] Length = 271 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T + L FL + + R P + LS + Sbjct: 66 RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 124 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 125 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 179 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD + LD+ + +R + +ER V +K + + Sbjct: 180 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 229 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + I++++ + + V I +V + V++ Sbjct: 230 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 258 >gi|21553651|gb|AAM62744.1| thymidylate kinase-like protein [Arabidopsis thaliana] Length = 263 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T + L FL + + R P + LS + Sbjct: 58 RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 116 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 117 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 171 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD + LD+ + +R + +ER V +K + + Sbjct: 172 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 221 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + I++++ + + V I +V + V++ Sbjct: 222 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 250 >gi|189490439|ref|YP_001957008.1| thymidylate kinase [Pseudomonas phage 201phi2-1] gi|164609504|gb|ABY63113.1| thymidylate kinase [Pseudomonas phage 201phi2-1] Length = 357 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 49/228 (21%), Positives = 100/228 (43%), Gaps = 17/228 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP----AAEAARHVLLSCGVDE 61 FI +G + +GK+T + ++ + D REPGG P AE R L++ + Sbjct: 7 FIVLDGPDFSGKSTLMKAFLARVEAEGIDHVAMREPGGIPGSGSLAEEIRVALIANRDER 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSL 120 E + ++ A R+ +V+++I PAL + K ++ DRF+ S++ + H +L D L Sbjct: 67 VHPETDVLLHMAYRVQNVKDIILPALADNKWVISDRFVFSTWCLNVQAHLETHPYLTDML 126 Query: 121 QEIS----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + P T ILD P +I +R + + D +E + +H++ Sbjct: 127 YGLMPYVLQGLPEP-LTFILDTPREIRDQRANS-----DERKKDRYESQPAAVHDRIEAA 180 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + + R+ P C +D + + + ++ + ++ ++ Sbjct: 181 YEQL-RSSPS-CKFIDGTLPIEEQVDIMFAYIKGFKEQVLGQMAEAEE 226 >gi|160902557|ref|YP_001568138.1| thymidylate kinase [Petrotoga mobilis SJ95] gi|160360201|gb|ABX31815.1| thymidylate kinase [Petrotoga mobilis SJ95] Length = 232 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 19/228 (8%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57 M G+ I E G + +GK T +L + L+ + + P + A + L Sbjct: 1 MKKGMLIVIESGTDASGKATQAEILSQRLKDEKIKAYKVEFPNYKSDSSALIKMYLKGEF 60 Query: 58 --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS 112 + A + FA R + ++P G IL+ DR+ S+ YQ + S Sbjct: 61 GENPEAINPYAASTFFAVDRFATYQKELKPLYESGGILISDRYTTSNMIYQSSKFENQSE 120 Query: 113 QHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + FL+ L ++ + P+ I LD+P I ++ ++ R K++ Sbjct: 121 KDEFLEWLWDLEFNKFNLPKPNYVIFLDIPPKISIELLRKRKEKIIDLTGKDIHEKNIEY 180 Query: 170 HEKRRQIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWEL 211 K + IA+ I++ S + + I +I ++ Sbjct: 181 INKTYENAKYIAQKY--NWTIINCLKENEELKSIEEIHEEIYSIWKQI 226 >gi|166713902|ref|ZP_02245109.1| thymidylate kinase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 227 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 39/233 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLEAAGARFVLSKEPTNGPWGTKLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G I++ DR+ S AYQG L+ L Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLE-LNA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R IF + P + H+VD++ SV I+ + R+S + D Sbjct: 163 RCRTIFAGL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGATAD 212 >gi|152992943|ref|YP_001358664.1| thymidylate kinase [Sulfurovum sp. NBC37-1] gi|254808312|sp|A6Q9Z8|KTHY_SULNB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|151424804|dbj|BAF72307.1| thymidylate kinase [Sulfurovum sp. NBC37-1] Length = 191 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+ GK+T + LL + K+ + T EPGGT + AR +LLS + Sbjct: 1 MYILFEGIDTCGKSTQMELLTQ----KHPGIITTHEPGGTAFGQQAREILLSDSLR--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H E V+ P KI++ DR S Y L +L + Sbjct: 55 RAELLLFLADRAEHYEEVVEP--NHDKIVVSDRGFVSGIGYALANGDFDFDELVALNRFA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +++ PD I+ ++ +R+ + LD E + + + ++ + Sbjct: 113 LKDHFPDRIILFMTDMETLKQRISEK-------ELDGIELRGLEYLLRVQEHMKESILKL 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S +++ +IL + Sbjct: 166 GIPHLFIDATDSIENIHQSILTYLK 190 >gi|30697225|ref|NP_851222.1| ZEU1 (ZEUS1); ATP binding / thymidylate kinase [Arabidopsis thaliana] gi|110741098|dbj|BAE98643.1| thymidylate kinase - like protein [Arabidopsis thaliana] gi|332009806|gb|AED97189.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana] Length = 263 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T + L FL + + R P + LS + Sbjct: 58 RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 116 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 117 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 171 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD + LD+ + +R + +ER V +K + + Sbjct: 172 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 221 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + I++++ + + V I +V + V++ Sbjct: 222 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 250 >gi|256372673|ref|YP_003110497.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331] gi|256009257|gb|ACU54824.1| thymidylate kinase [Acidimicrobium ferrooxidans DSM 10331] Length = 194 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 +G + GK+T + L ++ + DV R+PGG PAAEA R V+ AE Sbjct: 2 VLDGPDKVGKSTQVHLAVAAVRARGVDVVTARDPGGDPAAEALREVVK---TRSLAPWAE 58 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEISVQ 126 + FAAAR V V+RPA+ G ++ DR+ S+ YQG + ++ L++L Sbjct: 59 LLTFAAARAQLVATVVRPAVEAGTHVILDRYFPSTIVYQGPKVGEDAIWALEAL----TG 114 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 + + D ++LD R D FE E+ R + D AR+ Sbjct: 115 DPVADLVLVLD------------RAEPLGLDAGDRFEAGGRSAWEQIRARYADRARSWG- 161 Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212 +VD+ S +VA + ++ + Sbjct: 162 -WRLVDANGSRDAVAARVQAMIMAEL 186 >gi|255527280|ref|ZP_05394160.1| conserved hypothetical protein [Clostridium carboxidivorans P7] gi|296188361|ref|ZP_06856753.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7] gi|255509018|gb|EET85378.1| conserved hypothetical protein [Clostridium carboxidivorans P7] gi|296047487|gb|EFG86929.1| hypothetical protein CLCAR_3888 [Clostridium carboxidivorans P7] Length = 241 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 13/225 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 MN G+ I EG +G+GK T +L L +NY V P + A + L+ Sbjct: 1 MNRGIVIVVEGCDGSGKATQTQILYEKLLSENYKVKKIEYPNYKSDSSALVKMYLNGDFG 60 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQ 113 ++ + +A R + + G I+L DR+ ++ +Q + + Sbjct: 61 SNPEDVNPYVSSTFYAVDRFASYKTEWKDFYESGGIVLADRYTTANMVHQASKIKNVQEK 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FLD L + +PDC + LD+P + K ++ R + KD Sbjct: 121 SKFLDWLWDFEFRIFGLPVPDCVMFLDMPPEYSRKLMKERANKITGDSHKDIHEKDYEYL 180 Query: 171 EKRRQIFLDIARNQP-DRCHIV-DSA-HSFQSVATNILNIVWELV 212 E +IA +R V + S + ++ + NIV + + Sbjct: 181 EHSYNNSCEIAEKYKWNRVKCVKEGNIKSIELISEEVFNIVKKQL 225 >gi|55742029|ref|NP_001006834.1| thymidylate kinase [Xenopus (Silurana) tropicalis] gi|49899892|gb|AAH76907.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana) tropicalis] gi|89266991|emb|CAJ81735.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus (Silurana) tropicalis] Length = 216 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 81/212 (38%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG + AGK+T L L+ + Y R P T L + Sbjct: 5 RGALIVLEGADRAGKSTQARRLVEALKERGYKTEGLRFPERTTEIGRLIGSYLEKKSN-L 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + V +I+ L G L+ DR+ S A+ +++ L ++ Sbjct: 64 EDHTIHLLFSANRWEQVP-MIKEKLRSGVTLVIDRYAFSGVAFTSSKENFD---LHWCKQ 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V PD + L++ ++ R + E+ EK + + ++ Sbjct: 120 PDVGLPKPDLVLFLNVSPEVAASRGGFGNEIYETNS----------FQEKVSKRYAELME 169 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ ++D++ + + V + + + ++ Sbjct: 170 DKTVNWTLIDASQNIEDVHRQLKELTEKAIED 201 >gi|289666405|ref|ZP_06487986.1| thymidylate kinase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289669267|ref|ZP_06490342.1| thymidylate kinase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 227 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 95/233 (40%), Gaps = 39/233 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARCLATTLETAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G I++ DR+ S AYQG L+ Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R IF + P + H+VD++ SV I+ + R+S ++ D Sbjct: 163 RCRTIFAGL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDAAHAD 212 >gi|258571125|ref|XP_002544366.1| thymidylate kinase [Uncinocarpus reesii 1704] gi|237904636|gb|EEP79037.1| thymidylate kinase [Uncinocarpus reesii 1704] Length = 212 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 47/220 (21%), Positives = 88/220 (40%), Gaps = 14/220 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ AGK+T ++L L+ Y + R P T + L G Sbjct: 1 MTRGALIVMEGLDRAGKSTQCAVLVDKLREMGYKTNYIRFPDRTTSIGKIIDGYL-RGEV 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A ++F+A R + + + I + G ++ DR+ S Y + + L LD Sbjct: 60 QLEDHAIHLLFSANRWE-LASRIHEDISNGISIVIDRYSYSGAVYSAAKGNKD-LSLDWA 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD L++ + +R L+ +E +V + + ++F + Sbjct: 118 WRPEIGLPRPDMWFFLNVSPEEAERR--------GGYGLERYE--NVTLQLRVGKLFKSL 167 Query: 181 ARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + + IVD+ S + VA I + + + PL Sbjct: 168 QGMENNEEMRIVDANQSKEEVAQQIFELSSAAIGQIEGPL 207 >gi|300853347|ref|YP_003778331.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528] gi|300433462|gb|ADK13229.1| thymidylate kinase [Clostridium ljungdahlii DSM 13528] Length = 227 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 87/235 (37%), Gaps = 33/235 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 + G I EG +G+GK T L + L +NY++ P + A + L+ Sbjct: 3 LQKGKLIVIEGCDGSGKATQTEKLYKRLLNENYNLKKIEYPNYNSESSALVRMYLNGDFG 62 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 ++ A A + +A R + + G I+L DR+ ++ +Q + Sbjct: 63 KKPEDVSAYAASTFYAVDRFASYKMEWKKFYENGGIILADRYTTANMIHQASKIDDLEEK 122 Query: 116 --FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL L PDC I LD+P + K + R + + IH Sbjct: 123 NKFLKWLWNFEFDIFRLPVPDCVIFLDMPPEYSKKLMTKRNNKFTGNA-------EKDIH 175 Query: 171 EKRRQIFLDIARNQPDRCHIVD-----------SA--HSFQSVATNILNIVWELV 212 E+ + + + + HIVD + + + +I +++ +++ Sbjct: 176 ERD---YEYLVNSYKNAIHIVDKYNWNKISCIEGSEIKTVDKIHEDIYDLIKKIL 227 >gi|134109297|ref|XP_776763.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259443|gb|EAL22116.1| hypothetical protein CNBC2540 [Cryptococcus neoformans var. neoformans B-3501A] Length = 217 Score = 146 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG++ GK+T + L + L+R+ + + + P T L + Sbjct: 5 TRGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPDRTTQIGKMIDAYLQSKTE- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + IR L G ++ DR+ S A+ + L D Sbjct: 64 IDDHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFSAAKG----LPFDFCL 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +PD T+ L LP + KR + + +E V I + RQ F +A Sbjct: 119 HPDAGLPLPDVTLYLTLPPETAAKR--------SAYGEERYE--SVSIQQAVRQQFKLVA 168 Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQ 213 +R +++ +F+ V I + + +V+ Sbjct: 169 NEIKNRHGSDKWIEIEADGTFEDVEERIWSQISNVVE 205 >gi|268611868|ref|ZP_06145595.1| putative thymidylate kinase [Ruminococcus flavefaciens FD-1] Length = 224 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 83/227 (36%), Gaps = 18/227 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58 G I EG++G+GK T +LL L+ + P + + L Sbjct: 2 KGKLIVIEGLDGSGKATQTALLCEKLKTLGVEFDHFSFPDYNSESSLLVRMYLDGKFGDN 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLF 116 E A + FA R + G I++CDR+ S+ +Q + D F Sbjct: 62 AAEVNPYAASCFFACDRYASFRTQWQDKYEGGHIIVCDRYTTSNAVHQCSKLPDGEWDDF 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++ L + + PD I L + +IG + ++ RY+ E D E+ D + Sbjct: 122 VNWLFDFEYRKIGLPEPDAVIYLRVDPEIGQELLKKRYNGDEKKK-DIHEK-DEDHLNRS 179 Query: 174 RQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELVQKR 215 R A+ H + + Q +A + V +++ + Sbjct: 180 RLTADHCAKLYG--WHTIECVNENGMRDKQEIAEEVFEAVRSVIKNK 224 >gi|282848946|ref|ZP_06258335.1| dTMP kinase [Veillonella parvula ATCC 17745] gi|282581221|gb|EFB86615.1| dTMP kinase [Veillonella parvula ATCC 17745] Length = 228 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 82/229 (35%), Gaps = 23/229 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T LL L ++ + V P A + L+ V Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKNV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHLF 116 + + ++A R G I++ DR+ S+ +Q + + F Sbjct: 62 HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDNPKERTAF 121 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L++ Q+ PD +LD+P+++ + R D E + Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHAYLVAV 180 Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212 + ++ + H + A + + + ++ ++V L+ Sbjct: 181 HGAYEELVKRYQ--WHRIPCAYKAKSSQYTLRTIEEIHNDVYSVVENLL 227 >gi|145242644|ref|XP_001393895.1| thymidylate kinase [Aspergillus niger CBS 513.88] gi|134078448|emb|CAK40391.1| unnamed protein product [Aspergillus niger] Length = 224 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 18/222 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ AGK++ L + LQ + V R P TP + L G Sbjct: 9 RRGALIVVEGLDRAGKSSQCESLHQKLQDLGHSVKYIRFPDRTTPIGKLIDGYL--RGQS 66 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + + I + G ++ DR+ S Y + ++ L L+ Sbjct: 67 QLDDHSIHLLFSANRWE-IARAIEEDIAAGITVIVDRYSYSGAVYSAAK-ANPTLSLEWA 124 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD + L + D KR + +E + + + R++F I Sbjct: 125 WTPEIGLPQPDLCLFLSIAPDEAAKR--------GGFGAERYENETM--QSRVRELFQTI 174 Query: 181 AR-NQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPL 219 R + ++D+ SF++V+ +I V + + + + PL Sbjct: 175 FRVQRSGDIRVIDAGRSFEAVSVDIEKSVVDCIARLDAIGPL 216 >gi|307721020|ref|YP_003892160.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294] gi|306979113|gb|ADN09148.1| thymidylate kinase [Sulfurimonas autotrophica DSM 16294] Length = 191 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 15/204 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I+ LK+ + T+EPGGT + R ++LS Sbjct: 1 MYIAIEGIDTAGKSTQIAALKKHFPQ----AVTTKEPGGTEIGKEIREMVLSAKTK--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H++ VI P L K+++ DR S AY ++ L L + + Sbjct: 55 RAEFLLFLADRAEHIKEVIEPNL--HKVIISDRSAVSGVAYALIQEDIDTKDLVYLNDFA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +++ P +L L + R+ + LD E + + ++ + Sbjct: 113 TKKIYPKKIFLLRLTKEELEFRLSQK-------ELDGIELRGSEYLLQIQESIKKASELL 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 +D+ + IL+ + Sbjct: 166 GLTLIEIDATKPINEITEEILSNI 189 >gi|160933042|ref|ZP_02080431.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753] gi|156868116|gb|EDO61488.1| hypothetical protein CLOLEP_01884 [Clostridium leptum DSM 753] Length = 222 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 18/226 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG++G+GK T LL ++L+ + V P + A + L+ Sbjct: 1 MARGKLIVMEGLDGSGKATQTGLLCQYLESRGRRVRHIEFPDYREPSSALVKMYLNKEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQH 114 + A A + +A R R + G ++ DR+ S+ YQ E+ + Sbjct: 61 SNPGDVNAYAASSFYAVDRYASFLRFWRKDYLSGATIVADRYTTSNAVYQMEKTPREDWN 120 Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 +L LQ+ +Q PD + LD+P +I + + RY+ E D E +V Sbjct: 121 KYLAWLQDYEYGKLQLPRPDLVLFLDMPTEISQRLLSGRYAGDE-RKKDLHES-NVEFLT 178 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHS-----FQSVATNILNIVWELV 212 + R+ + + H V + + + +I IV + + Sbjct: 179 RCRRT--ALYAAEAMGWHTVSCSQEGAPRKIEDIQRDIREIVSQKL 222 >gi|294791584|ref|ZP_06756732.1| dTMP kinase [Veillonella sp. 6_1_27] gi|294456814|gb|EFG25176.1| dTMP kinase [Veillonella sp. 6_1_27] Length = 228 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 23/229 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T LL L ++ + V P A + L+ V Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116 + + ++A R G I++ DR+ S+ +Q + F Sbjct: 62 HDVNPYVASSMYAIDRFASFRTDWEQFYKNGGIIIADRYTTSNMVHQMVKYDDPKERTAF 121 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L++ Q+ PD +LD+P+++ + R D E + Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEALMAERTGKTGGNTGDIHEG-NHAYLVAV 180 Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212 + ++ + H + A + + + ++ ++V L+ Sbjct: 181 HGAYEELVKRYQ--WHRIPCADKAKSSQYTLRTIEEIHNDVYSVVENLL 227 >gi|30697228|ref|NP_568907.2| ZEU1 (ZEUS1); ATP binding / thymidylate kinase [Arabidopsis thaliana] gi|332009805|gb|AED97188.1| protein ZEU1 (ZEUS1) [Arabidopsis thaliana] Length = 224 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 84/212 (39%), Gaps = 19/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T + L FL + + R P + LS + Sbjct: 19 RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 77 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 78 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKA 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD + LD+ + +R + +ER V +K + + Sbjct: 133 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + I++++ + + V I +V + V++ Sbjct: 183 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 211 >gi|153940357|ref|YP_001389419.1| putative thymidylate kinase [Clostridium botulinum F str. Langeland] gi|152936253|gb|ABS41751.1| putative thymidylate kinase [Clostridium botulinum F str. Langeland] gi|295317529|gb|ADF97906.1| putative thymidylate kinase [Clostridium botulinum F str. 230613] Length = 231 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MQRGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + ++G I++ DR+ S+ +Q + + Sbjct: 61 RDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKSLMKTRNNKFTG------EKEK-DIH 173 Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ I+ + ++ S + +I+ I+ + + Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225 >gi|225452175|ref|XP_002264926.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296090257|emb|CBI40076.3| unnamed protein product [Vitis vinifera] Length = 260 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 84/212 (39%), Gaps = 19/212 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I EG++ +GK++ S + +L+ + R P + L+ D Sbjct: 49 SRGALIVLEGLDRSGKSSQSSRMMSYLEGLGVSAELWRFPDRSTCVGQMISSYLANKSD- 107 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 108 LDDHTIHLLFSANRWE-KRSLMETKLRTGTTLIVDRYSYSGVAFSSAKG----LDIEWCK 162 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD + L++P + +R + +E+ + K + + Sbjct: 163 APEMGLLAPDLVVYLNIPPEKAAER--------GGYGGERYEQ--LDFQRKVAHHYQVL- 211 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 P I+D++ + V + ++V + V+ Sbjct: 212 -RDPS-WKIIDASLPIEDVEKPLRDMVLDCVK 241 >gi|91763270|ref|ZP_01265234.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1002] gi|91717683|gb|EAS84334.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1002] Length = 203 Score = 145 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 9/212 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ I FEGIEG GK+ HI + +L RK REPGG+ +E R+++L+ Sbjct: 1 MSKKPIIVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSRNSEKIRNLILNNKST 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F E + +++ +AR +++ +IR + + KI+L DRF DS+ AYQ F+ ++ Sbjct: 61 -FNKETDLLLYLSARSENM-EIIRKNVGK-KIILIDRFSDSTIAYQHYGMGVNLKFIQNI 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + D T + + L ++ R LR+ +++ + +EK + F+ I Sbjct: 118 NNHLLKNIKIDFTFL----NTVNLSNMKKRLKLRKKLNR--YDKFNSKFYEKVQNGFIKI 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P + ++S ILN + +L+ Sbjct: 172 LKKNPKKYIRINSNLDIDLNENIILNKIKDLI 203 >gi|28209987|ref|NP_780931.1| thymidylate kinase [Clostridium tetani E88] gi|28202422|gb|AAO34868.1| thymidylate kinase [Clostridium tetani E88] Length = 228 Score = 145 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 85/230 (36%), Gaps = 29/230 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57 G I E +G+GK T L L YDV P + A + LS Sbjct: 4 KKGKLIVIEAPDGSGKATQTKKLYNKLVEDKYDVLKVEYPDYNSNSSALIKMYLSGEFGD 63 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQH 114 ++ A A + FA R + G I+L DR+ S+ +Q + + Sbjct: 64 KPNDVNAYAASTFFAVDRFASFKKKWGAFYENGGIILADRYTTSNMVHQASKIKNVEEKK 123 Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FLD L ++ + +PD TI LDLP + ++NR + ++ IHE Sbjct: 124 KFLDWLWDLEFNLMGLPIPDATIFLDLPPEYSRNLIKNRKNKFTGE-------EEKDIHE 176 Query: 172 KRRQIFLDIAR------NQPDRCHIVDS-----AHSFQSVATNILNIVWE 210 + + +L+I+ + ++ + + I ++ E Sbjct: 177 RD-EDYLNISYKNAVDIAEKYNWIKINCIKGDKIKNINEIHEEIYKVLKE 225 >gi|77407435|ref|ZP_00784304.1| thymidylate kinase [Streptococcus agalactiae H36B] gi|77173956|gb|EAO76956.1| thymidylate kinase [Streptococcus agalactiae H36B] Length = 117 Score = 145 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GL ISFEG +GAGKTT + + L+ K + D+ TREPGG +E RH++L Sbjct: 1 MKKGLMISFEGPDGAGKTTVLEAVLPLLREKLSQDILTTREPGGVTISEEIRHIILDVKH 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + + E +++ AAR H+ + PAL E +I+L DRF+DSS AYQG Sbjct: 61 TQMDKKTELLLYMAARRQHLVEKVLPALEEREIVLMDRFIDSSVAYQGSGRGLD 114 >gi|71083690|ref|YP_266410.1| thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1062] gi|71062803|gb|AAZ21806.1| Thymidylate kinase (dTMP kinase) [Candidatus Pelagibacter ubique HTCC1062] Length = 203 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 57/212 (26%), Positives = 105/212 (49%), Gaps = 9/212 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ I FEGIEG GK+ HI + +L RK REPGG+ +E R+++L+ Sbjct: 1 MSKKPIIVFEGIEGTGKSHHIKNVANYLTRKKIKFIQIREPGGSANSEKIRNLILNNKST 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F E + +++ +AR +++ +IR + + KI+L DRF DS+ AYQ F+ ++ Sbjct: 61 -FNKETDLLLYLSARSENI-EIIRKNVGK-KIILIDRFSDSTIAYQHYGMGVNLKFIQNI 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + D T + + L ++ R LR+ +++ + +EK + F+ I Sbjct: 118 NNHLLKNIKIDFTFL----NTVNLSNMKKRLKLRKKLNR--YDKFNSKFYEKVQNGFIKI 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + P + ++S ILN + +L+ Sbjct: 172 LKKNPKKYIRINSNLDIDLNENIILNKIKDLI 203 >gi|254457836|ref|ZP_05071263.1| thymidylate kinase [Campylobacterales bacterium GD 1] gi|207085229|gb|EDZ62514.1| thymidylate kinase [Campylobacterales bacterium GD 1] Length = 190 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 84/205 (40%), Gaps = 15/205 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I LK D +T+EPG T + R ++LS Sbjct: 1 MYIAIEGIDTAGKSTQIQKLKENFP----DAIITKEPGATAIGKEIREIVLSAKAQ--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R +H++ V+ P L K+++ DR S AY + + L + Sbjct: 55 KAEFLLFLADRAEHIKEVVEPNLD--KMIISDRSAVSGVAYALIQGEISETAIVHLNRFA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P +L L + R+ + LD E + + + Sbjct: 113 TGGIYPQKVFLLKLTKEELEYRLSQK-------ELDGIELRGSEYLLSIQDAIIKATELL 165 Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209 +D+ +S + + IL + Sbjct: 166 NLELVTIDATNSIEDITKEILKNIE 190 >gi|91203291|emb|CAJ72930.1| similar to thymidylate kinase [Candidatus Kuenenia stuttgartiensis] Length = 234 Score = 145 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 18/226 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS--CG 58 G I GI+G+GKT LL L ++ Y V P G T AE L Sbjct: 10 QGKLIVITGIDGSGKTVQTKLLYERLLKEGYPVATIDFPQYGKTFFAEMVAKYLRGSFGA 69 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER------DSS 112 D +I++A R + ++ I+ + GKI++ +R++ + A+QG + + Sbjct: 70 ADAVSPYLASILYAGDRFE-KKDQIQTWIDAGKIIISNRYVCDNMAHQGGKIKNSEERAQ 128 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +LD L+ P +I+L +P +I V+ + A ++ M H K Sbjct: 129 FFQWLDQLEHTVFGIPRPHLSILLYVPAEIAYFLVEKKGQREYLAGAKKDIHEEDMHHMK 188 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHS----FQSVATN-ILNIVWELV 212 ++ F++IA+ +P+ VD + + V + I V +++ Sbjct: 189 SAQETFIEIAKGKPN-WKTVDCTKNNTLLPEHVIADTIWQAVAKIL 233 >gi|301305668|ref|ZP_07211757.1| thymidylate kinase [Escherichia coli MS 124-1] gi|300839096|gb|EFK66856.1| thymidylate kinase [Escherichia coli MS 124-1] Length = 134 Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 5/134 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS--- 56 M S +I EG+EGAGKTT +++ L++ D+ TREPGGT AE R ++L Sbjct: 1 MRS-KYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLVLDIKS 59 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + +AE ++F AAR+ VE VI+PAL G ++ DR S+ AYQG Sbjct: 60 VGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQHM 119 Query: 117 LDSLQEISVQEVMP 130 L +L++ + + P Sbjct: 120 LATLRDAVLGDFRP 133 >gi|50303763|ref|XP_451827.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49640959|emb|CAH02220.1| KLLA0B06556p [Kluyveromyces lactis] Length = 208 Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 86/221 (38%), Gaps = 20/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GK+T + L D + + P T + L+ Sbjct: 1 MVRGKLILIEGLDRTGKSTQCENVVNAL---GNDAVLIKFPDRTTKIGQLINQYLTDKDF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A++ ++F+A R + ++ I L GK ++ DR++ S AY + Q + + Sbjct: 58 ELPAQSIHLLFSANRWE-LKEEIHSMLKAGKHVVLDRYVYSGVAYSAAK-GIQGMDISWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD T+ + RE + +E+ V + R F ++ Sbjct: 116 FNPDKGLLKPDLTLFFS---------NSSNMRDREGFGEERYEK--VEFQRQVRDTFFNV 164 Query: 181 ARN--QPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVSP 218 +R ++D S S V + I ++ +++ K + Sbjct: 165 FDQIKDSNRI-VIDVSDKSIDEVFSEIKPLIHDVINKELGE 204 >gi|294793438|ref|ZP_06758575.1| dTMP kinase [Veillonella sp. 3_1_44] gi|294455008|gb|EFG23380.1| dTMP kinase [Veillonella sp. 3_1_44] Length = 228 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 23/229 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T LL L ++ + V P A + L+ V Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLTKEGHAVKSVSFPNYNSGAAMPIKMYLAGEFGKDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116 + + ++A R G I++ DR+ S+ +Q + + F Sbjct: 62 HDVNPYVASSMYAIDRFASFRTDWEQFYNNGGIIIADRYTTSNMVHQMVKYDDLKERTAF 121 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L++ Q+ PD +LD+P+++ + R D E + Sbjct: 122 LDWLEDFEFQKFGLPKPDAVCLLDMPLEVSEVLMAERTGKTGGNTGDIHEG-NHAYLVAV 180 Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212 + ++ + H + A + + + ++ +V L+ Sbjct: 181 HDAYEELVKRYQ--WHRIPCADKAKSSQYTLRTIEEIHNDVYGVVENLL 227 >gi|58265708|ref|XP_570010.1| thymidylate kinase [Cryptococcus neoformans var. neoformans JEC21] gi|57226242|gb|AAW42703.1| thymidylate kinase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 217 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 21/217 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG++ GK+T + L + L+R+ + + + P T L + Sbjct: 5 TRGAFIVFEGLDRCGKSTQVDRLVQRLERQGHRARLQKFPERTTQIGKMIDAYLQSKTE- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + IR L G ++ DR+ S A+ + L D Sbjct: 64 IDDHAIHLLFSANRWE-CSAAIRRDLANGITVIADRYAFSGIAFSAAKG----LPFDFCL 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +PD T+ L LP + KR + + +E V I + RQ F +A Sbjct: 119 HPDAGLPLPDVTLYLTLPPETAAKR--------SAYGEERYE--SVSIQQAVRQQFKLVA 168 Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQ 213 R +++ +F+ V I + + ++V+ Sbjct: 169 NEIKKRHGADKWIEIEADGTFEDVEERIWSQISDVVE 205 >gi|168185104|ref|ZP_02619768.1| putative thymidylate kinase [Clostridium botulinum Bf] gi|237793368|ref|YP_002860920.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657] gi|182671852|gb|EDT83813.1| putative thymidylate kinase [Clostridium botulinum Bf] gi|229263044|gb|ACQ54077.1| putative thymidylate kinase [Clostridium botulinum Ba4 str. 657] Length = 231 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQAKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + ++G I++ DR+ S+ +Q + + Sbjct: 61 KDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 121 DNFLNWLWDFEFKKFNLPVPDCVIFLDMPPKFSKSLMKTRNNKFTG------EKEK-DIH 173 Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ I+ + ++ S + +I+ I+ + + Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225 >gi|297793501|ref|XP_002864635.1| thymidylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297310470|gb|EFH40894.1| thymidylate kinase family protein [Arabidopsis lyrata subsp. lyrata] Length = 263 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 87/220 (39%), Gaps = 21/220 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T + L FL+ + + R P + LS + Sbjct: 58 RGALIVLEGLDRSGKSTQCAKLLSFLEGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 116 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + +++ L G L+ DR+ S A+ + L +D + Sbjct: 117 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LNIDWCKA 171 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD + LD+ + +R + +ER V +K + + Sbjct: 172 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLRD 221 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLS 220 + I+++ + + V I + + V++ + PLS Sbjct: 222 SS---WKIINAGEAMEEVEKKIQEVALDKVKECTKGKPLS 258 >gi|124005922|ref|ZP_01690760.1| thymidylate kinase [Microscilla marina ATCC 23134] gi|123988605|gb|EAY28246.1| thymidylate kinase [Microscilla marina ATCC 23134] Length = 232 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 26/233 (11%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS- 56 M FI EG++G+GK+T + L+ LQ P G + L Sbjct: 1 MTKPNKFIVIEGLDGSGKSTQLKLITAHLQNAGIKYQHIHFPVMGEGYYGQLTAEFLRGD 60 Query: 57 -CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------- 108 +D+ + A++FA R++H+E I L +G +++ DR+++S+ A+Q Sbjct: 61 LGALDQVHPKIAALIFAGNRVEHLEQ-INQWLADGYVVIADRYVNSNIAFQCAKFDNQTE 119 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFER 164 +D+ + L+ E ++ P ++ LD+P K + N+ + A L D E Sbjct: 120 KDTLKKWILEFEYEFNL-LPRPASSLFLDVPFASIKKSLTNQREGDDRAYLQGKSDIHED 178 Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSA------HSFQSVATNILNIVWEL 211 + + EK RQ +L + + QPD H++ + + + I +L Sbjct: 179 -SLDLQEKVRQEYLQMVKEQPD-FHLIKCSDEKGNYLPPEQIHAEIKARFDQL 229 >gi|213969786|ref|ZP_03397921.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1] gi|301382862|ref|ZP_07231280.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13] gi|302062832|ref|ZP_07254373.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40] gi|302131340|ref|ZP_07257330.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213925594|gb|EEB59154.1| thymidylate kinase [Pseudomonas syringae pv. tomato T1] Length = 119 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 46/101 (45%), Positives = 66/101 (65%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GLFI+ EG EGAGK+T+ L L+ + V +TREPGGTP AE R +LL+ + Sbjct: 2 TGLFITLEGPEGAGKSTNRDYLAAQLRAQGVQVLLTREPGGTPLAERIRELLLAPSDEGM 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 A+ E ++ AAR H+ VIRPAL G+++LCDRF ++ + Sbjct: 62 SADTELLLVFAARAQHLAEVIRPALARGEVVLCDRFTNNLF 102 >gi|160945247|ref|ZP_02092473.1| hypothetical protein FAEPRAM212_02766 [Faecalibacterium prausnitzii M21/2] gi|158442978|gb|EDP19983.1| hypothetical protein FAEPRAM212_02766 [Faecalibacterium prausnitzii M21/2] gi|295105536|emb|CBL03080.1| thymidylate kinase [Faecalibacterium prausnitzii SL3/3] Length = 223 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 84/233 (36%), Gaps = 32/233 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M+ G I EG++G+GK T LL L + V P + A + L+ Sbjct: 1 MSKGKLIVLEGLDGSGKATQAKLLAEHLAAQGVPVQKITFPDYASDSSALVKMYLAGQFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D+ A A + +A R + +G +++ DR+ S+ +Q + Q + Sbjct: 61 QHPDDVNAYAASSFYAVDRYASYKTSWGSFYEQGGVIIADRYTTSNAVHQCSK-LPQEQW 119 Query: 117 LDSLQEIS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L + + PD I L + + + + RY ES +H Sbjct: 120 EEYLHWLFDYEFRLLGLPAPDRVIYLQVDPAVSQRLMTQRYHGDESKK---------DVH 170 Query: 171 EKRRQIFLDIARNQPDRCHI------V-----DSAHSFQSVATNILNIVWELV 212 EK +L +R + C V D+ S + + + + + + Sbjct: 171 EKD-TAYLARSRAAAEFCARHLGWDTVHCTSGDAMRSIEEIQQEVQQLARKTL 222 >gi|170761117|ref|YP_001785385.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch Maree] gi|169408106|gb|ACA56517.1| putative thymidylate kinase [Clostridium botulinum A3 str. Loch Maree] Length = 231 Score = 144 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 49/234 (20%), Positives = 87/234 (37%), Gaps = 31/234 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + +G I++ DR+ S+ +Q + + Sbjct: 61 MDPDSVNPYASSTFYAVDRFASYKKDWEEFYQKGGIIIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKSLMKTRNNKFTG------EKEK-DIH 173 Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ I+ + V+ S + +I+ I+ + + Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRVECTNKDKIKSIDQINDDIIKIITQYI 225 >gi|78049663|ref|YP_365838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|123583913|sp|Q3BN25|KTHY_XANC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|78038093|emb|CAJ25838.1| thymidylate kinase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 226 Score = 144 bits (365), Expect = 6e-33, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 39/226 (17%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG L+ Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + R IF + + P + H+VD++ SV I+ + R+S Sbjct: 163 RCRTIFAAL--DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205 >gi|283954334|ref|ZP_06371855.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414] gi|283794133|gb|EFC32881.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 414] Length = 191 Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEGI+ GK+T ISLLK+ + D T EPGGT + R +LL+ Sbjct: 1 MYIVFEGIDCVGKSTQISLLKKIYK----DAVFTLEPGGTELGKHLREILLN-KTYPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A R H E V++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RTELLLFLADRAQHFEEVLKD--NQNKLIISDRSFISGMAYAKDF---ENDLLFTLNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P I L + +R+ + LD E++ + + I + Sbjct: 111 LDNFFPQKVIFLKGDEKLIKERLNQK-------ELDNIEKRGIEYFLSVQDKLEKILKFL 163 Query: 185 PDRCHI----VDSAHSFQSVATNILNIV 208 ++ I +D+ S +++ I + Sbjct: 164 KEKISIEILTLDAKESKENLHQQIKEFL 191 >gi|288559843|ref|YP_003423329.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1] gi|288542553|gb|ADC46437.1| thymidylate kinase Tmk1 [Methanobrevibacter ruminantium M1] Length = 196 Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 48/208 (23%), Positives = 87/208 (41%), Gaps = 22/208 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFG 63 ++I EGI+GAGK+T I+ LK +L+ + V EP R +L S + Sbjct: 1 MYIVLEGIDGAGKSTQINYLKGWLEDNGFKVETIVEPTDLEVGNLIRQLLTRSDATSDTM 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++FAA RL ++ I E +++ DR SS YQ ++ + + Sbjct: 61 QKTLGLLFAADRLVLMDK-IEKLESERTVVISDRSFYSSLVYQ-----KPQDWIREINKF 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +P + L + + S+ D FE + ++ +L ++R Sbjct: 115 AK------------IPDLVLLLDLDVKKSVERCDGTDEFENE--EFLTGVKENYLALSRE 160 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 D I+D+ + VA++I V L Sbjct: 161 N-DNFKIIDANNGPNKVASDIKKAVAPL 187 >gi|313113917|ref|ZP_07799475.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255] gi|310623756|gb|EFQ07153.1| dTMP kinase [Faecalibacterium cf. prausnitzii KLE1255] Length = 223 Score = 144 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 87/232 (37%), Gaps = 30/232 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M+ G I EG++G+GK T LL L+ + + V P + A + L+ Sbjct: 1 MSKGKLIVLEGLDGSGKATQAKLLAAHLKEQGFSVREITFPNYESDSSALVKMYLAGQFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 D+ A A + +A R + G I++ DR+ S+ +Q + + Sbjct: 61 QHPDDVNAYAASSFYAVDRYASYKKDWGSFYENGGIIIADRYTTSNAVHQCSKLPPEQWE 120 Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FL L + + PD I L + + K + RY ES +HE Sbjct: 121 SFLGWLFDFEFHLLGLPAPDEVIYLQVDPAVSQKLMTQRYHGDESRK---------DVHE 171 Query: 172 KRRQIFLDIARNQPDR------CHIV-----DSAHSFQSVATNILNIVWELV 212 K + +L +R + +V D+ S + + + IV + + Sbjct: 172 KDTE-YLARSRCAAEYCAAHLGWAVVHCTSGDNMRSIEDIQAEVQEIVLKQL 222 >gi|325928260|ref|ZP_08189463.1| thymidylate kinase [Xanthomonas perforans 91-118] gi|325541350|gb|EGD12889.1| thymidylate kinase [Xanthomonas perforans 91-118] Length = 226 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 92/226 (40%), Gaps = 39/226 (17%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLATTLDAAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE EA + R +HV+ +I PAL G I++ DR+ S AYQG L+ Sbjct: 65 SAEEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLER-NA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + R IF + + P + H+VD++ SV I+ + R+S Sbjct: 163 RCRTIFAAL--DLPGK-HVVDASADADSVLRQAHAIIVAALADRLS 205 >gi|209882114|ref|XP_002142494.1| thymidylate kinase family protein [Cryptosporidium muris RN66] gi|209558100|gb|EEA08145.1| thymidylate kinase family protein [Cryptosporidium muris RN66] Length = 208 Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 79/214 (36%), Gaps = 17/214 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG + +GKT + L + +N + + P + + L + Sbjct: 1 MRRGALIVFEGTDRSGKTLQSNKLAEKFKNENINCILIGFPDRSTNIGYLLDLYL-RNCE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+A R ++ E I+ L G ++CDR+ S AY + ++ Sbjct: 60 NMRPEVSHLLFSANRWEYFEK-IKTYLESGVTVICDRYAFSGVAYSV---GALKKDIEWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD LD V I RV R + ++ + I+ Sbjct: 116 MMPEKGLISPDIVFFLDADVQI---RV-----DRSGFGDERYDTEST--QNSVSTIYSQF 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + D ++D++ V NI N + + K Sbjct: 166 KKY--DYWKVIDASKDPNDVFENIYNFAKQALCK 197 >gi|321254063|ref|XP_003192951.1| thymidylate kinase [Cryptococcus gattii WM276] gi|317459420|gb|ADV21164.1| thymidylate kinase, putative [Cryptococcus gattii WM276] Length = 217 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 21/217 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG++ GK+T + L + L+R+ + + P T L + Sbjct: 5 TRGAFIVFEGLDRCGKSTQVDHLVQRLERQGRRARLQKFPDRTTQIGKMIDAYLQSKTE- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + IR L G ++ DR+ S A+ + L D Sbjct: 64 IDDHAIHLLFSANRWE-CSAAIRRDLASGITVIADRYAFSGIAFSAAKG----LCFDFCL 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +PD T+ L LP + +R + + +E V I + RQ F +A Sbjct: 119 QPDAGLPLPDATLYLTLPPETAARR--------SAYGEERYE--SVSIQQAVRQQFKLVA 168 Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVWELVQ 213 R +D+ + V + + + ++V+ Sbjct: 169 NEIKKRHGADKWIEIDADGTITDVKERVWSQISDVVE 205 >gi|328867446|gb|EGG15828.1| thymidylate kinase [Dictyostelium fasciculatum] Length = 214 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 90/220 (40%), Gaps = 21/220 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M GLFI FEG + GK+T + L +L+ D V R P T + + L Sbjct: 8 MKRGLFILFEGADRVGKSTQVQKLGDYLKNGLQLDAKVLRFPDRTTPTGSIINGYL-QNT 66 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A +++AA R + +N+++ L G ++ DR+ S AY + + +D Sbjct: 67 TQLDDRAIHLLYAANRWEAKDNLMK-LLNSGTSIVVDRYSYSGVAYTAAKG----IDVDW 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD I L + + +LR + +E+ V K +QI+ Sbjct: 122 CFNCEKGLPEPDLVIYLKMTTEDA--------TLRGEYGTERYEK--VDFQNKIKQIYEQ 171 Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 + + P ++++ +V+ I NI+ + + + Sbjct: 172 HLIK--PS-WKVINANRDIDTVSNEINNIIKTEINQLIDK 208 >gi|85057562|ref|YP_456478.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789667|gb|ABC65399.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 209 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 9/209 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT I +K L+++ +V V R G + E+ R L+ ++ Sbjct: 2 KLIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLT--HNKLHN 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + E +I+P L KI+L DR+L S++AY+ + + ++ Sbjct: 60 LTRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKY-YFFNNLT 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P+ T+ L + GL R N+ + LD E + + + F + + Sbjct: 119 KLFIKPNLTVYLKIDPQTGLNRKANQTNH----TLDVIETSPLSYFYQVEKGFQEFLNKK 174 Query: 185 PDRCHIVDSA--HSFQSVATNILNIVWEL 211 I+++ +++S I+ + E+ Sbjct: 175 LGPQIILNAMEPKTWKSNTKQIIKKIGEI 203 >gi|39939174|ref|NP_950940.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|39722283|dbj|BAD04773.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 209 Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 93/209 (44%), Gaps = 9/209 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT I +K L+++ +V V R G + E+ R L+ ++ Sbjct: 2 KLIIFEGLDGSGKTGLIKSVKHGLKKQGKEVIVIRGLGSSTIGESIRETFLT--HNKLHN 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + E +I+P L KI+L DR+L S++AY+ + + ++ Sbjct: 60 LTRYFLSFANMIQTQEELIKPHLETNKIILVDRWLGSNFAYRVYPNRIDKKY-YFFNNLT 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P+ T+ L + GL R N+ + LD E + + + F + + Sbjct: 119 KLFIKPNLTVYLKIDPQTGLNRKANQTNH----TLDVIETSPLSYFYQVEKGFQEFLNKK 174 Query: 185 PDRCHIVDSA--HSFQSVATNILNIVWEL 211 I+++ +++S I+ + E+ Sbjct: 175 LGPQIILNAMEPKTWKSNTKQIIKKIGEI 203 >gi|67477898|ref|XP_654383.1| Thymidylate kinase [Entamoeba histolytica HM-1:IMSS] gi|56471425|gb|EAL48995.1| Thymidylate kinase, putative [Entamoeba histolytica HM-1:IMSS] Length = 210 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 18/214 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +N GL I EGI+ +GK++ + L++K P + L Sbjct: 3 INRGLLIVLEGIDQSGKSSATQRVCELLEKKGIQSVKQPFPDRSTDIGKLIDEFLHGKN- 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++++A R + V I+ L +G ++CDR+ S Y + Sbjct: 62 -LPQQVVHLLYSANRWE-VAQNIKETLEKGITVICDRYAFSGIVYSIANGLDE----KWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 PD L+L ++ KR R++ D +E K + + Sbjct: 116 NSADCGLPKPDIVFFLELSLEDAEKR-------RKTMKTDRYENTK--FQSKVKCEYEKF 166 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +D++ S + VA I +I+ + + + Sbjct: 167 --KDSMKWTCIDASQSKEEVALEITSIIEQQLPQ 198 >gi|296449094|ref|ZP_06890884.1| thymidylate kinase [Clostridium difficile NAP08] gi|296879917|ref|ZP_06903890.1| thymidylate kinase [Clostridium difficile NAP07] gi|296262187|gb|EFH08992.1| thymidylate kinase [Clostridium difficile NAP08] gi|296429206|gb|EFH15080.1| thymidylate kinase [Clostridium difficile NAP07] Length = 234 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 87/229 (37%), Gaps = 18/229 (7%) Query: 1 MN-SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G I E G + +GK T +L L+++ Y + P + A + L Sbjct: 4 MKMKGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGD 63 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SS 112 + + F A R + EG I++ DR+ S+ +Q + Sbjct: 64 FGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVCD 123 Query: 113 QHLFLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + +L+ L E ++ ++ PDC + LD+P++ K ++NR + D+ Sbjct: 124 REKYLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEY 183 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 +K L IA ++ S +S+ I IV + ++ Sbjct: 184 LQKSYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 230 >gi|219669039|ref|YP_002459474.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2] gi|219539299|gb|ACL21038.1| thymidylate kinase [Desulfitobacterium hafniense DCB-2] Length = 225 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 30/230 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T L R L + V P + + + + L Sbjct: 2 GKLIIIEGGDGSGKATQTRKLWRRLADEGLQVKKVEFPNYSSPSSSLVTMYLGGEFGTDP 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--- 116 + + +A R + + G I+L DR+ S+ +Q + + Sbjct: 62 NGVNPYTASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGWASY 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDV 167 LD L++ + PD I L++P D+ ++ + R D E ++ Sbjct: 122 LDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIQFIAGRADKSSVTSQDIHEKNKGYLKESY 181 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 +K R + +D S + + I + + + Sbjct: 182 DNAQKVRVR---------ENWLTIDCVSEGRLKSIEEIHEEIYAVTQKAI 222 >gi|80751137|ref|NP_001032187.1| thymidylate kinase [Danio rerio] gi|78070418|gb|AAI07816.1| Zgc:123174 [Danio rerio] Length = 212 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 80/211 (37%), Gaps = 15/211 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L + +Q+ + R P T L + Sbjct: 4 RRGALIVLEGVDRAGKTTQCQKLVQAIQQSGRAAEIMRFPDRTTKIGQLISSYLEKKSN- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V V++ L EG L+ DR+ S A+ + L+ Sbjct: 63 LEDHTVHLLFSANRWEMVP-VMKQKLEEGINLVVDRYAFSGVAFTSAK---PGFSLEWCM 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD + L L ++ R + +E +Q F ++ Sbjct: 119 NPDVGLPKPDLVMFLQLNPNVAANR--------GEYGNERYE--TSAFQRTVQQRFEELM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ ++D+A + + V +I ++ ++ Sbjct: 169 QDTSINWKVIDAARTIEEVHKDIKDLSENII 199 >gi|157165350|ref|YP_001466858.1| thymidylate kinase [Campylobacter concisus 13826] gi|166221732|sp|A7ZDK0|KTHY_CAMC1 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|112801334|gb|EAT98678.1| thymidylate kinase [Campylobacter concisus 13826] Length = 195 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 14/205 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+G GK+T I +L D VT+EPGGT R +LL + + G Sbjct: 1 MYVLFEGIDGVGKSTQIEILASKFS----DAIVTKEPGGTQLGVNLREILLRSSI-KIGK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123 AE ++F A R +H E ++ P L GK++L DR S AY D + L L + Sbjct: 56 RAEILLFLADRAEHFEKLVAPNL--GKLILSDRGFISGIAYALANDENLDENVLLELNKF 113 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + D I + ++ R++ R D E + + K + + I Sbjct: 114 ALNDKFADKIIFFEASRELISSRLKAR------GTSDKIEARGLEYLLKVQSLMKQILIK 167 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +D++ S + ++ I N + Sbjct: 168 NGFETLFIDASKSIELISKEIENFI 192 >gi|255657498|ref|ZP_05402907.1| putative thymidylate kinase [Clostridium difficile QCD-23m63] Length = 229 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 17/226 (7%) Query: 3 SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58 G I E G + +GK T +L L+++ Y + P + A + L Sbjct: 2 KGKLIIIESGSDASGKATQTKILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGDFGK 61 Query: 59 -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHL 115 + + F A R + EG I++ DR+ S+ +Q + + Sbjct: 62 NASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIVIADRYTTSNMVHQASKMDVCDREK 121 Query: 116 FLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +L+ L E ++ ++ PDC + LD+P++ K ++NR + D+ +K Sbjct: 122 YLNWLADYEFNLFKIPQPDCVVFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEYLQK 181 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 L IA ++ S +S+ I IV + ++ Sbjct: 182 SYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 225 >gi|225683576|gb|EEH21860.1| thymidylate kinase [Paracoccidioides brasiliensis Pb03] Length = 224 Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 24/223 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T +LL+ LQR ++ + R+ P Sbjct: 11 QRGALIVVEGLDRAGKSTQCALLQEALQRGGHENYGDRKTDQCPIWL---------ETHN 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +F+A R + + I+ + G ++ DR+ S Y +D L LD Sbjct: 62 WMTIQSIFLFSANRWEAAKE-IQKDISNGISIIIDRYSYSGAVYSAAKD-VPGLSLDWAW 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-I 180 + + PD + L++ + +R L+ +E + ++ + RQ+F I Sbjct: 120 QPEIGLPQPDIWLFLNISPEEAARR--------GGYGLERYE--NDILQARVRQLFQTFI 169 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK--RVSPLSS 221 R P ++++ S VA +IL+ + ++K + PL S Sbjct: 170 EREDPANVCVINAGRSEADVAQDILSEARKAIKKIQAIGPLRS 212 >gi|315452626|ref|YP_004072896.1| thymidylate kinase [Helicobacter felis ATCC 49179] gi|315131678|emb|CBY82306.1| thymidylate kinase [Helicobacter felis ATCC 49179] Length = 190 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 20/207 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I FEG++ +GK+T I+LLK + + EPGGT E R L F A Sbjct: 1 MWIVFEGVDTSGKSTQINLLKPLFPK----AIFSLEPGGTALGEHLRQAALHGA---FCA 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + ++F A R H+E VI+P K++ DR L S AY +H + L Sbjct: 54 QTQFLLFLADRALHLEEVIKP--NAHKLIFSDRSLVSGLAYSSY--GLEHAW--ELHRAH 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +V+PD ++ L R+Q + D E + V + ++ Sbjct: 108 GLDVLPDMVLLFKLNAHTLEMRLQAKN-------PDGIESRGVDFLMRVQERLEQACALL 160 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 R ++++ S + V +L ++ L Sbjct: 161 GVRTESINASKSVEEVHKIVLEKIYAL 187 >gi|260685068|ref|YP_003216353.1| putative thymidylate kinase [Clostridium difficile CD196] gi|260688726|ref|YP_003219860.1| putative thymidylate kinase [Clostridium difficile R20291] gi|260211231|emb|CBA66748.1| putative thymidylate kinase [Clostridium difficile CD196] gi|260214743|emb|CBE07430.1| putative thymidylate kinase [Clostridium difficile R20291] Length = 234 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 87/229 (37%), Gaps = 18/229 (7%) Query: 1 MN-SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G I E G + +GK T +L L+++ Y + P + A + L Sbjct: 4 MKMKGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGD 63 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSS 112 + + F A R + EG I++ DR+ S+ +Q + Sbjct: 64 FGKNASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDICD 123 Query: 113 QHLFLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + +L+ L E ++ ++ PDC I LD+P++ K ++NR + D+ Sbjct: 124 REEYLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEY 183 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 EK L IA ++ S +S+ I IV + ++ Sbjct: 184 LEKSYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 230 >gi|89894606|ref|YP_518093.1| hypothetical protein DSY1860 [Desulfitobacterium hafniense Y51] gi|89334054|dbj|BAE83649.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 225 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 78/230 (33%), Gaps = 30/230 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T L + L + V P + + + + L Sbjct: 2 GKLIIIEGGDGSGKATQTRKLWQRLADEGLQVKKVEFPNYSSPSSSLVTMYLGGEFGTDP 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--- 116 + A + +A R + + G I+L DR+ S+ +Q + + Sbjct: 62 NAVNPYAASTFYAVDRYASYKTLWGDFYSRGGIILSDRYTTSNMIHQAVKIKDPAGWASY 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDV 167 LD L++ + PD I L++P D+ ++ + R D E ++ Sbjct: 122 LDWLKDFEYRLMGLPEPDLVIYLNMPPDLSIRFIAGRADKSSVTSQDIHEKNKGYLKESY 181 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 +K R + +D S + + I + + + Sbjct: 182 DNAQKVRVR---------ENWLTIDCVSEGRLKSIEEIHEEIYAVTQKAI 222 >gi|153004942|ref|YP_001379267.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] gi|152028515|gb|ABS26283.1| dTMP kinase [Anaeromyxobacter sp. Fw109-5] Length = 214 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 68/218 (31%), Positives = 93/218 (42%), Gaps = 19/218 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-----S 56 G FI EG++GAG TT LL L+ VHVT EP G P R VL Sbjct: 7 RRGRFIVLEGLDGAGTTTQARLLGDRLRASGRSVHVTAEPSGGPVGSLVRQVLSRRVVGG 66 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G E A A A++FAA RLDHV I P L G ++ DRF SS AYQG Sbjct: 67 RGEGELDAGALALLFAADRLDHVAAEIAPKLAGGVDVVSDRFTLSSLAYQGLTTGD---- 122 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L ++ I+ + PD T+ L + LKR R +A +D + + Sbjct: 123 LPWVEAINGRAATPDVTLFLRARPSVALKR-------RRAASIDPELYEVSEFQRAVARS 175 Query: 177 F---LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + ++ R R +D ++V+ + V L Sbjct: 176 YDRGIERLRAAGQRVVELDGEAPVEAVSAAVWAEVEAL 213 >gi|148231460|ref|NP_001084596.1| deoxythymidylate kinase (thymidylate kinase) [Xenopus laevis] gi|46250064|gb|AAH68663.1| MGC81047 protein [Xenopus laevis] Length = 212 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG + AGK+T L L+ + Y R P T L + Sbjct: 5 RGALIVLEGADRAGKSTQARRLVEALKERGYRTEGLRFPERTTEIGQLIGSYLEKKSN-L 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + V +I+ L G L+ DR+ S A+ +++ L ++ Sbjct: 64 EDHTIHLLFSANRWEQVP-MIKEKLRSGITLVVDRYAFSGVAFTSSKENFD---LHWCKQ 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V PD + L + ++ R + E+ EK + + + Sbjct: 120 PDVGLPKPDLVLFLKVSPEVAATRGGFGNEIYETNS----------FQEKVAKRYAQLMD 169 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ +VD++ ++V + + + + Sbjct: 170 DKTVNWKLVDASQDIENVHRQLKELSEKAIDD 201 >gi|225716352|gb|ACO14022.1| Thymidylate kinase [Esox lucius] Length = 212 Score = 143 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 80/211 (37%), Gaps = 15/211 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT + L + L + R P T + L + Sbjct: 4 RRGALIVLEGVDKAGKTTQCNKLIQALLENEQPAEMMRFPERTTMIGQLINSYLEKKSN- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V +++ L +G L+ DR+ S A+ + LD + Sbjct: 63 LEDHTVHLLFSANRWEQVP-LMKEKLEQGITLVVDRYAFSGVAFTSAK---PGFTLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD + L++ +R + +E + +Q F ++ Sbjct: 119 NPDVGLPKPDLVMFLNVSPSEAARR--------GHFGTERYE--TSVFQRAVQQGFEELM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ ++ ++ + + V +I N E + Sbjct: 169 KDSSVNWQVIGASRNIEDVHADIKNHTIEAI 199 >gi|126701174|ref|YP_001090071.1| putative thymidylate kinase [Clostridium difficile 630] gi|254977174|ref|ZP_05273646.1| putative thymidylate kinase [Clostridium difficile QCD-66c26] gi|255094504|ref|ZP_05323982.1| putative thymidylate kinase [Clostridium difficile CIP 107932] gi|255102760|ref|ZP_05331737.1| putative thymidylate kinase [Clostridium difficile QCD-63q42] gi|255308581|ref|ZP_05352752.1| putative thymidylate kinase [Clostridium difficile ATCC 43255] gi|255316255|ref|ZP_05357838.1| putative thymidylate kinase [Clostridium difficile QCD-76w55] gi|255518916|ref|ZP_05386592.1| putative thymidylate kinase [Clostridium difficile QCD-97b34] gi|255652095|ref|ZP_05398997.1| putative thymidylate kinase [Clostridium difficile QCD-37x79] gi|306521829|ref|ZP_07408176.1| putative thymidylate kinase [Clostridium difficile QCD-32g58] gi|115252611|emb|CAJ70454.1| Thymidylate kinase (dTMP kinase) [Clostridium difficile] Length = 229 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 86/226 (38%), Gaps = 17/226 (7%) Query: 3 SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58 G I E G + +GK T +L L+++ Y + P + A + L Sbjct: 2 KGKLIIIESGSDASGKATQTEILYERLKKEGYMIKKVEYPNYESPSSALVKMYLKGDFGK 61 Query: 59 -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL 115 + + F A R + EG I++ DR+ S+ +Q + + Sbjct: 62 NASDVDPYIASTFFTADRYASFKTDWEEFYNEGGIIIADRYTTSNMVHQASKMDICDREE 121 Query: 116 FLDSL--QEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +L+ L E ++ ++ PDC I LD+P++ K ++NR + D+ EK Sbjct: 122 YLNWLADYEFNLFKIPQPDCVIFLDVPIEFSKKLMENRKNKITGEEKKDIHESDIEYLEK 181 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 L IA ++ S +S+ I IV + ++ Sbjct: 182 SYNNALYIADKYD--WKKINCVLDNKLRSIESIHNEIYKIVLDSIK 225 >gi|315427436|dbj|BAJ49042.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum] gi|315427468|dbj|BAJ49072.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum] Length = 200 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 19/212 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +I+ EGI+GAGKTT LL R L R + V EP R L Sbjct: 1 MKT-FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREAL--AKRV 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A++FAA RL + I A G ++ DR + SS AYQ + + + Sbjct: 58 NMSEEVLALLFAADRL-TLREKIVSAKQSGVYVVSDRSVVSSLAYQSAALGLR----NWV 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++ V PD + +D+ + LKR++ + +E +++ K + + + Sbjct: 113 YEVNRFAVKPDIIVYIDISPETALKRLRKKSQ--------RYE--NMVFLRKVKNAYSRV 162 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +VD +VA I+ + + Sbjct: 163 LHDF-RRVVVVDGEQPVDAVAEAIVEKLSRFI 193 >gi|170755522|ref|YP_001779682.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra] gi|169120734|gb|ACA44570.1| putative thymidylate kinase [Clostridium botulinum B1 str. Okra] Length = 231 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + ++G I++ DR+ S+ +Q + + Sbjct: 61 RDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIVIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 121 DNFLNWLWDFEFKKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173 Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ I+ + ++ S + +I+ I+ + + Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225 >gi|291542136|emb|CBL15246.1| thymidylate kinase [Ruminococcus bromii L2-63] Length = 224 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 84/225 (37%), Gaps = 19/225 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M S I EG++G+GK T +L + V P A A + L Sbjct: 1 MKS-KIIVIEGLDGSGKATQTKILCEKISALGKKVTKLEFPNYESPAAAPVKMYLDGEFG 59 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 D+ A A + +A R+ + G ++L DR++ S+ YQ + + Sbjct: 60 DKPDDVNAYAASAFYAVDRVASYLQFWKKECDNGGVILSDRYVTSNIIYQMSKLPKEEWN 119 Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 F+D L + + PD I LD+ ++ K ++ RY S D E+ ++ Sbjct: 120 SFIDWLNDFEYEKLGIPKPDLVIYLDVEPEVSQKLMEKRYGGDNSKK-DLHEK-NLRFLL 177 Query: 172 KRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWEL 211 R+ + + +++ S + ++ I E+ Sbjct: 178 DCRKS--AVYAAKKCGWKVINCCENGEIKSIEKISEEIERAAAEI 220 >gi|324512226|gb|ADY45070.1| Thymidylate kinase [Ascaris suum] Length = 234 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 78/218 (35%), Gaps = 16/218 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I FEG + AGK+T + +Q + + P T + L G Sbjct: 3 KRGALIVFEGCDRAGKSTQAQRMVGRIQARGERAELISFPDRSTDLGKFIDQYLK--GNV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +VFAA R + +R L G L+ DR+ S AY + L + Sbjct: 61 EMEPREAHLVFAANR-QALVGTMRNKLQHGTHLIVDRYTYSGIAYTLAKGLDVSLEWAKI 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V + PDC + DL D KR + E + + Sbjct: 120 HD--VGILKPDCVLYFDLLPDEARKR--------SGFGDERLEA--YEYQCTVYKFMQTL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 D ++D++ S V+T++ N++ ++ + Sbjct: 168 GSENADIWKVIDASKSIDEVSTDVWNLLKPVLDSAAAK 205 >gi|312128608|ref|YP_003993482.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] gi|311778627|gb|ADQ08113.1| thymidylate kinase [Caldicellulosiruptor hydrothermalis 108] Length = 249 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 87/224 (38%), Gaps = 18/224 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G EG +G+GK+T + LLK++L+ Y V T A + + + Sbjct: 17 GRLFVVEGCDGSGKSTQVHLLKKWLEFLGYTVFFTEWNSSDLVKNATKK---AKKKNLLT 73 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ A D E +I P L G I+LCDR++ ++YA ++ ++ + Sbjct: 74 PTTFSLLHACDFADRYERLILPHLRAGYIVLCDRYIYTAYARD-IARGCNPEWVKTVYDF 132 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESAC-------LDYFERKDVMIHEKRRQ 175 + V P T +PVD+ + R+ R ++ D E + K Q Sbjct: 133 A---VKPTVTFYFKVPVDVAIDRILMGRTQIKYYEAGMDLGLSTDTVESFKL-YQSKIIQ 188 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 ++ +A + +D S + + IV + P Sbjct: 189 MYDMLAEQEG--FITIDGTLSIRQQQKMVREIVQRYLHDYSPPT 230 >gi|154174807|ref|YP_001408262.1| thymidylate kinase [Campylobacter curvus 525.92] gi|254808283|sp|A7GYH0|KTHY_CAMC5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|112802787|gb|EAU00131.1| thymidylate kinase [Campylobacter curvus 525.92] Length = 194 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 50/206 (24%), Positives = 95/206 (46%), Gaps = 14/206 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEG++G GK+T I ++ R + D VT+EPGGT + R +LL G + A Sbjct: 1 MYVLFEGVDGVGKSTQIEMIARAHE----DSLVTKEPGGTKIGQKLREILL-GGDFKLSA 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123 AE ++F A R +H + +I+P +++L DR S AY D S + L L Sbjct: 56 RAEILLFLADRAEHYQKMIKP--NSSRLILSDRGFVSGVAYALANDASLKIDDLLWLNSF 113 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ D + + + KR+ +R +D E + + K ++ ++ + Sbjct: 114 ALEGKFADKIVFFEASETLIKKRLSSR------GLIDAIEARGLKYLLKVQECMKEVLKA 167 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 +D++ ++ I N + Sbjct: 168 HKFNVLYIDASEDIATINAKIENFIK 193 >gi|85057461|ref|YP_456377.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789566|gb|ABC65298.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 210 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 7/187 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I +++ LQ++ +V V R G + + R L+ + Sbjct: 2 KLIIFEGLDGSGKTSLIKSVQQELQKQGNEVVVIRGLGSSTIGNSIRETFLT--HNNLHN 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + E I+ L KI+L DR+L S++AY+ + +S Sbjct: 60 LTRYFLSFANMIQTQEECIKHQLKTNKIILVDRWLGSNFAYRVYPSKIDKNY-HIFNNLS 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + PD TI L + +GL+R N+ + LD E + ++ + + + + Q Sbjct: 119 KKFIKPDITIYLKIHPQLGLERKINQKNH----QLDVIETSSLTYFQQVEKGYFEFLKKQ 174 Query: 185 PDRCHIV 191 I+ Sbjct: 175 NIGTKII 181 >gi|315425277|dbj|BAJ46945.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum] Length = 200 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 19/212 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +I+ EGI+GAGKTT LL R L R + V EP R L Sbjct: 1 MKT-FYIAVEGIDGAGKTTQAKLLARKLTRHGFRVMNVHEPTDGKIGGLIREAL--AKRV 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A++FAA RL + I A G ++ DR + SS AYQ + + + Sbjct: 58 NMSEEVLALLFAADRL-TLREKIVSAKQSGVYVVSDRSVVSSLAYQSAALGLR----NWV 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E++ V PD + +D+ + LKR++ + +E +++ K + + + Sbjct: 113 YEVNRFAVKPDIIVYIDISPETALKRLRKKSQ--------RYE--NMVFLRKVKNAYSRV 162 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R +VD +VA I+ + + Sbjct: 163 LHDF-RRVVVVDGEQPVDAVAETIVEKLSRFI 193 >gi|109101748|ref|XP_001094132.1| PREDICTED: thymidylate kinase-like isoform 2 [Macaca mulatta] Length = 212 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHAVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ Q F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAYGHERYENR--AFQERALQCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 R+ +VD++ S ++V +I + + +K + L Sbjct: 169 RDTTLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPLGELW 211 >gi|183220659|ref|YP_001838655.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910761|ref|YP_001962316.1| thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775437|gb|ABZ93738.1| Thymidylate kinase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779081|gb|ABZ97379.1| Thymidylate kinase (dTMP kinase) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 203 Score = 142 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 14/203 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F FEGI+G+GKTT + L K+ REP + + R L G + + Sbjct: 7 FFVFEGIDGSGKTTVSKKVSEILSTKSISNLWHREPTDSIHGQKIREFL--QGKIKLTPD 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + +F R V I P L L+ DR+ S+ AYQG + L ++ Sbjct: 65 EQLKLFLLDREFSVNETILPTLKSDTCLVQDRYYFSTAAYQGRDEEHAADILYMNED--K 122 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 P+ LDL + L+R R +E+ F+ + + Q +L I P Sbjct: 123 GFPEPNRVYFLDLSPEEALERRNTRGGNKEA-----FDDEKE--QTRIYQNYLAIL---P 172 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 + VD+ + V + + Sbjct: 173 ESTIFVDATADLEEVVNFCVEDI 195 >gi|218246100|ref|YP_002371471.1| dTMP kinase [Cyanothece sp. PCC 8801] gi|218166578|gb|ACK65315.1| dTMP kinase [Cyanothece sp. PCC 8801] Length = 207 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 89/214 (41%), Gaps = 20/214 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58 LFI EGI+ AGK+T LLK + + ++ EP P + R +++ Sbjct: 2 KPLFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIK 61 Query: 59 VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 E A +FAA R H+ N V + E ++ R+ SS AY + Sbjct: 62 NKHNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC----NTQ 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 D + ++ + PD +D+ +++ + R+ N S RE +E + + ++ + Sbjct: 118 EEFDFVAGLNQRFPNPDIVFYIDINLEVAISRLSN-ASFREV-----YETEAKL--KQVK 169 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + I R +D + +S+ I++ + Sbjct: 170 HNYKSIFAKYTGRLLKLDGTETIESIHHKIVHYL 203 >gi|171909511|ref|ZP_02924981.1| thymidylate kinase [Verrucomicrobium spinosum DSM 4136] Length = 218 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGKTT + L ++ + +++EP R S Sbjct: 1 MLIAIEGIDGAGKTTVSATLAQWCGERGLLCALSKEPTSLEWGRKLRE---SAASGRLTL 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E +F R H E I+PAL E I++ DR+ S+ AYQG + + + E + Sbjct: 58 AQELDLFHKDREQHSEGSIQPALDEDAIMVLDRYYWSTAAYQGA-RGANVDDVLAFNETN 116 Query: 125 V---------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + G R++ R S FE DV + R+ Sbjct: 117 FPLPDLVLLLDLPV-----------ATGQDRIRVRGDQPNS-----FE--DVDALSRCRE 158 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 IFL + RC IVD++ ++ V+ L + + Q+++ +S + + Sbjct: 159 IFLQLPGRSQARCVIVDASRPWREVSKECLALFKQAAQQKLWKTASPRSL 208 >gi|262089274|gb|ACY24495.1| thymidylate kinase [uncultured crenarchaeote 57a5] Length = 245 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 96/227 (42%), Gaps = 34/227 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTPAAEAARHVLLSCG 58 G FI EG + +G++T I LL L+ + V E G EA R+ +L Sbjct: 33 KGRFIIIEGPDASGRSTQIELLSSKLEADGHAVLNAGLRRSELIGQGILEAKRNFVL--- 89 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G + ++ +AA D +EN I P L G ++L DR++ + A + + + Sbjct: 90 ----GRKTISLFYAADFADQLENKIIPGLRAGYVVLSDRYIYTLMAREAV-RGISSSWSN 144 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----------KDV 167 +L + + PD LD+ + + RV ++++ LDY+E + Sbjct: 145 NLYGFA---LRPDIVFYLDVDPNELVHRV-----FKKNSYLDYYESGTDLRLSDNMMESF 196 Query: 168 MIHEK-RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++++K R+ F + + ++ S + ++ + + +Q Sbjct: 197 VMYQKLLRKEFKRMQKRY--NIVSINGNRSITEINEDLQKRIDDYLQ 241 >gi|294658466|ref|XP_460810.2| DEHA2F10252p [Debaryomyces hansenii CBS767] gi|202953154|emb|CAG89151.2| DEHA2F10252p [Debaryomyces hansenii] Length = 218 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 92/224 (41%), Gaps = 24/224 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ +GK+T +L L + + P + + + L+ Sbjct: 1 MGRGQLILIEGLDRSGKSTQSGILSERLPGG----KLIKFPDRSTKVGSIINEYLTNSEL 56 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER------DSSQH 114 + ++F+A R + ++++ L +G ++ DR++ S AY + S + Sbjct: 57 NLSDQTAHLLFSANRWELADSIVND-LNKGHFIVMDRYIYSGIAYSLAKSRFSNDSSPEM 115 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +D L PD TI L L ++ S R+ + +E+++ + + Sbjct: 116 ASIDWLYSPDKGLPKPDLTIFLTLSLEE--------LSNRKGWGEERYEKEN--FQKSVK 165 Query: 175 QIFLDIARNQPD-RCHIVD-SAHSFQSVATNILNIVWEL-VQKR 215 FL++ D HI+D + + V I +++ + + K+ Sbjct: 166 NCFLEVLNADNDASVHIIDVNNLNIDQVTAKIWDLIEQKNLNKQ 209 >gi|331220445|ref|XP_003322898.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309301888|gb|EFP78479.1| thymidylate kinase [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 228 Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 89/231 (38%), Gaps = 22/231 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI FEG++ +GK+T L+ L++ V R P T A + L C E Sbjct: 6 QRGSFIVFEGLDRSGKSTQCRRLEEKLKQAGRTVESIRFPDRTTAIGQMINSYL-CQTSE 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117 A ++FAA R + + I L G ++CDR+ S A+ + S + + Sbjct: 65 LDDHAIHLLFAANRWEKSAD-IHTTLRSGTTIICDRYAFSGTAFTAAKFSIRTPPEPEPI 123 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV------MIHE 171 +L +PD I L L RE + +E ++ + Sbjct: 124 ATLACADRGLPLPDLVIFLTL--------GDQSLDNREGFGNERYENTELQDEVKRQFTQ 175 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 R F +I DR VD+ + + V I ++V +Q V + K Sbjct: 176 VVRPYFEEIHGR--DRWVNVDATGTIEEVEQRIWHVVDNHLQHFVPQSTGK 224 >gi|257059151|ref|YP_003137039.1| thymidylate kinase [Cyanothece sp. PCC 8802] gi|256589317|gb|ACV00204.1| thymidylate kinase [Cyanothece sp. PCC 8802] Length = 207 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 89/214 (41%), Gaps = 20/214 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58 LFI EGI+ AGK+T LLK + + ++ EP P + R +++ Sbjct: 2 KPLFIVLEGIDKAGKSTQAELLKNYFIHQQESAIISSEPTDGPIGKLIREAMQSQIIAIK 61 Query: 59 VDEFGAEAEAIVFAAARLDHVEN----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 E A +FAA R H+ N V + E ++ R+ SS AY + Sbjct: 62 NKHNFDEQMAYLFAADRHYHLYNDVDGVYKLMKEEHSHVIATRYYFSSLAYNC----NTQ 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 D + ++ + PD +D+ +++ + R+ N ++ + +E + + ++ + Sbjct: 118 EEFDFVAGLNQRFPNPDIVFYIDINLEVAISRLSN------ASFKEVYETEAKL--KQVK 169 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + I R +D + +S+ I++ + Sbjct: 170 HNYETIFAKYTGRLLKLDGTETIESIHHKIVHYL 203 >gi|303231908|ref|ZP_07318617.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6] gi|302513437|gb|EFL55470.1| dTMP kinase [Veillonella atypica ACS-049-V-Sch6] Length = 228 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 85/230 (36%), Gaps = 23/230 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T L LQ + + V P A + LS V Sbjct: 2 GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLSGQFGTDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116 D + ++A R + +G I++ DR+ S+ +Q + + + F Sbjct: 62 DSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKRVQF 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L+ L++ PD +LD+P+D+ + R D E + + + Sbjct: 122 LEWLEDFEFVKFGLPRPDAVCLLDVPLDVTESLMSERTGKTGGETGDIHEG-NRVYLQAV 180 Query: 174 RQIFLDIARNQPDRCHIVDSAH----------SFQSVATNILNIVWELVQ 213 + ++ H + A S +S+ +I ++V +++ Sbjct: 181 HNAYDELVERYQ--WHRISCAQQDESGTFTMRSIESIHNDIYDVVKTILR 228 >gi|302795849|ref|XP_002979687.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii] gi|300152447|gb|EFJ19089.1| hypothetical protein SELMODRAFT_111305 [Selaginella moellendorffii] Length = 253 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 19/201 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ +GK++ L FL+ V R P T A ++ L G + Sbjct: 5 KRGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAE- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + + LM G L+ DR+ S A+ + L L+ + Sbjct: 64 LDDRAVHLLFSANRWE-KRLQMEKKLMAGTTLVVDRYSYSGVAFSAAKG----LDLEWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V D + LD+ + ++R + +E+ + +K + + Sbjct: 119 APEVGLPAADLVLYLDISPEEA--------AVRGGYGDERYEQ--LDFQKKVALQYKGL- 167 Query: 182 RNQPDRCHIVDSAHSFQSVAT 202 Q R IVD+ SF V Sbjct: 168 --QGKRWKIVDARQSFDQVHE 186 >gi|291166624|gb|EFE28670.1| dTMP kinase [Filifactor alocis ATCC 35896] Length = 226 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 79/220 (35%), Gaps = 17/220 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58 G I EG +G+GK T +LL ++L + + P + + + L+ Sbjct: 2 KGKLIVIEGTDGSGKETQSNLLYQYLSDRGIPCRIVHFPNYNSPSSSLVKMYLAGEFGTE 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQHL 115 D +I +A R + +G +++ DR++ S+ +Q + ++ Sbjct: 62 ADSVSPYIASIFYAGDRYASWKTDWMSFYEQGGVVIVDRYVMSNLIHQASKLKTTEEKNQ 121 Query: 116 FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 F D L ++ PD TI L + +D+ ++ R + ++ ++ Sbjct: 122 FRDWLYDLEYHIFSLPKPDMTIFLHVDIDVTFALMKERLNKITDEEKKDIHEQNYDYMKR 181 Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILNI 207 + A+ + VD + I+ + Sbjct: 182 SYETACYFAQQ--ENWKRVDCVLKGGMKPIDVIHGEIIAL 219 >gi|307109187|gb|EFN57425.1| hypothetical protein CHLNCDRAFT_20952 [Chlorella variabilis] Length = 230 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 78/213 (36%), Gaps = 18/213 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G FI FEG + AGK+T +L LQ + + R P TP + L S + Sbjct: 7 RGAFIVFEGADRAGKSTQCQMLVEHLQAQGVAAELWRFPDRTTPIGKMINSYLTSQS--D 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + E ++R L EG L+ DR+ S A+ + L Sbjct: 65 IDDAAVHLLFSANRWEKREELLR-KLHEGTTLVVDRYAYSGVAFTAAK-GLPGLDRAWCM 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD L L V+ R + +E+ K F + Sbjct: 123 APDAGLPAPDAVFFLCLTVEQAAAR--------GGYGEERYEK--DEFQRKVLDQFHAM- 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +VD++ S ++ + +V + Sbjct: 172 --RGSSWRVVDASQSIDAIQQQLREQAAAVVAR 202 >gi|255071733|ref|XP_002499541.1| predicted protein [Micromonas sp. RCC299] gi|226514803|gb|ACO60799.1| predicted protein [Micromonas sp. RCC299] Length = 216 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 16/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG++ GKTT + L L+ + + R P T + L +D Sbjct: 9 RGAFILFEGVDRCGKTTQSTKLVESLKAAGVNAELWRYPDRTTEMGKMINAYLQSSLD-M 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++F+A R + + AL +G L+ DR+ S A+ + L L+ + Sbjct: 68 DDGAIHLLFSANRWE-KRAAMEKALGDGVTLVVDRYSYSGVAFTAAK-EVPGLDLEWCKA 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD + LD+PVD R + +E + E+ R F + Sbjct: 126 PERGLLRPDAVLYLDMPVDAAKTR--------GGFGEERYE--TGELQERVRTHFRVLRE 175 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D I+D++ + V + E +Q+ Sbjct: 176 ---DWWTIIDASGTIDDVHSKCAAAADEAIQR 204 >gi|172986|gb|AAA35158.1| thymidylate kinase [Saccharomyces cerevisiae] gi|190409534|gb|EDV12799.1| thymidylate kinase [Saccharomyces cerevisiae RM11-1a] gi|207343848|gb|EDZ71181.1| YJR057Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|256273082|gb|EEU08037.1| Cdc8p [Saccharomyces cerevisiae JAY291] Length = 216 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + + + I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 59 QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116 Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + V + PD T+ L D+ + + + +E V EK +Q F Sbjct: 117 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 164 Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212 + + + + IVD + Q V I IV ++ Sbjct: 165 MKLLDKEIRKGDESITIVDVTNKDIQEVEALIWQIVEPVL 204 >gi|242046716|ref|XP_002461104.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor] gi|241924481|gb|EER97625.1| hypothetical protein SORBIDRAFT_02g040820 [Sorghum bicolor] Length = 254 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 85/213 (39%), Gaps = 19/213 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + EG++ +GK++ + L FL+ K YD R P + L+ + Sbjct: 51 RGALVVLEGLDRSGKSSQCARLLSFLKGKGYDAEGWRFPDRATSVGQMISAYLA-NESQL 109 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + ++ L+ G L+ DR+ S A+ + L ++ + Sbjct: 110 DDRTIHLLFSANRWE-KRALMESKLLSGTTLVVDRYSYSGVAFSAAKG----LDIEWCKA 164 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ + +R + +E+ + +K + + + Sbjct: 165 PENGLIAPDLVIYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVAEHYHSL-- 212 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + ++D + ++V + ++ +Q+R Sbjct: 213 -RGSTWKVIDGSLPMETVEEKLRDLATSCIQER 244 >gi|145505513|ref|XP_001438723.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405895|emb|CAK71326.1| unnamed protein product [Paramecium tetraurelia] Length = 216 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 81/212 (38%), Gaps = 23/212 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G+FI+ EG++ +GK+T LL + L K P T L G Sbjct: 13 NRGVFIALEGLDKSGKSTQAKLLSQKLNAKK-----VSFPDRTTQLGLIISDYL-RGNKN 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R + I L +G ++ DR+ S A+ + L ++ + Sbjct: 67 MSDEVIHLLFSANRWEQ-HTSILKQLQDGTNIVSDRYAYSGVAFSAAKG----LPIEWCK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T L P++ KR + +E + +K F +A Sbjct: 122 APDAGLIQPDMTFYLTAPIEELSKR--------GDYGKEIYE--NSSFQQKVGSFFDQLA 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + +D+ S + ILN + E + Sbjct: 172 LE--ENFYKIDALKSIDEIQAEILNRISEKLN 201 >gi|259147521|emb|CAY80772.1| Cdc8p [Saccharomyces cerevisiae EC1118] gi|323308467|gb|EGA61712.1| Cdc8p [Saccharomyces cerevisiae FostersO] gi|323336951|gb|EGA78208.1| Cdc8p [Saccharomyces cerevisiae Vin13] Length = 215 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + + + I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + V + PD T+ L D+ + + + +E V EK +Q F Sbjct: 116 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 163 Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212 + + + + IVD + Q V I IV ++ Sbjct: 164 MKLLDKEIRKGDESITIVDVTNKDIQEVEALIWQIVEPVL 203 >gi|302338530|ref|YP_003803736.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293] gi|301635715|gb|ADK81142.1| thymidylate kinase [Spirochaeta smaragdinae DSM 11293] Length = 206 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 20/208 (9%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 FEG++GAG TT LL + K V +T EP + R VL G + E Sbjct: 12 VFEGLDGAGTTTQALLLADRCKLKGKAVQLTFEPTASEIGVVIRKVL--AGQLPYHPETL 69 Query: 68 AIVFAAARLDHV--ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A +F A R +H+ + I L + ++ DR+L SS AYQ + D + EI+ Sbjct: 70 ARLFVADRYEHLFGKGGILSLLDKHIAVIGDRYLFSSLAYQSL-----DVDFDIVYEINS 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LDIAR 182 +P+ I +DL + +R+ +R D FE + + ++ R+ + LD Sbjct: 125 MFPLPERLIYIDLAPEECERRMSDRDQR------DIFE--TLALQKRVRERYEHTLDRYV 176 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 + H +D A + + +A + +IV + Sbjct: 177 KSGMKIHRLDGALAKEELAEKVWSIVRD 204 >gi|323304253|gb|EGA58027.1| Cdc8p [Saccharomyces cerevisiae FostersB] Length = 215 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRXGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + + + I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + V + PD T+ L D+ + + + +E V EK +Q F Sbjct: 116 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 163 Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212 + + + + IVD + Q V I IV ++ Sbjct: 164 MKLLDKEIRKGDESITIVDVTNKDIQEVEALIWQIVEPVL 203 >gi|313893344|ref|ZP_07826918.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412] gi|313442113|gb|EFR60531.1| dTMP kinase [Veillonella sp. oral taxon 158 str. F0412] Length = 228 Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 23/229 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T LL L ++ + V P A + L+ V Sbjct: 2 GTLIILEGGDGSGKATQTKLLVERLIKEGHAVKSVSFPNYDSGAAMPIKMYLAGEFGKDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116 + + ++A R G I++ DR+ S+ +Q + Q F Sbjct: 62 HDVNPYVASSMYAIDRFASFRTDWEEFYKNGGIIIADRYTTSNMVHQMVKYDDQKERTAF 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L++ PD +LD+P+++ + R + D E + Sbjct: 122 LDWLEDFEFKKFGLPTPDAVCLLDMPLEVSEALMAERTGKTGGSTGDIHEG-NHQYLVAV 180 Query: 174 RQIFLDIARNQPDRCHIVDSA----------HSFQSVATNILNIVWELV 212 + ++ H + A + + + ++ V L+ Sbjct: 181 HDAYEELVERYQ--WHRIPCASKDEFSQYTLRTIEEIHNDVYQAVVNLL 227 >gi|148378062|ref|YP_001252603.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC 3502] gi|153932140|ref|YP_001382461.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC 19397] gi|153937766|ref|YP_001386013.1| putative thymidylate kinase [Clostridium botulinum A str. Hall] gi|148287546|emb|CAL81610.1| thymidylate kinase [Clostridium botulinum A str. ATCC 3502] gi|152928184|gb|ABS33684.1| putative thymidylate kinase [Clostridium botulinum A str. ATCC 19397] gi|152933680|gb|ABS39179.1| putative thymidylate kinase [Clostridium botulinum A str. Hall] Length = 231 Score = 141 bits (357), Expect = 5e-32, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + ++G I++ DR+ S+ +Q + + Sbjct: 61 RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173 Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ I+ + ++ S + +I+ I+ + + Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225 >gi|171204|gb|AAA34486.1| CDC8 gene [Saccharomyces cerevisiae] Length = 216 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDTF 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + + + I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 59 QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116 Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + V + PD T+ L D+ + + + +E V EK +Q F Sbjct: 117 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 164 Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212 + + + + IVD + Q V I IV ++ Sbjct: 165 MKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVL 204 >gi|237752726|ref|ZP_04583206.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430] gi|229376215|gb|EEO26306.1| thymidylate kinase [Helicobacter winghamensis ATCC BAA-430] Length = 193 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 24/208 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L+I+ EGI+ AGK+T ++ LK + D T EPG TP + R +LL+ + Sbjct: 6 LYIALEGIDTAGKSTQVARLKEVFK----DAVFTFEPGATPLGKHIREILLN--TEIVSP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R +H +VI P L K++L DR L S AY L+S Sbjct: 60 KAEMLLFLADRAEHFASVIAPNLD--KLILSDRSLISGIAY---ARDFDMEMLESFNAFV 114 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQI--FLDIA 181 ++ ++P+ I+L+L R+ + + E +DY + + E+ ++ FL I Sbjct: 115 LENILPNKAILLELDKQTLEYRLNQKGRDKIEQRGIDYL----LDLQERLKEAMEFLKIE 170 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 +++++ S+ I+ + Sbjct: 171 S------LVINASLPQDSITKQIVEFIQ 192 >gi|330797527|ref|XP_003286811.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum] gi|325083184|gb|EGC36643.1| hypothetical protein DICPUDRAFT_97517 [Dictyostelium purpureum] Length = 219 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 21/215 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPG-GTPAAEAARHVLLSCG 58 M GLFI FEG + GK+T + L + +N R P TP + L Sbjct: 13 MKRGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYL--QN 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 A ++F++ R + ++ I L G ++ DR+ S AY + + +D Sbjct: 71 ATNMDDRALHLLFSSNRWE-AKDSILELLNSGTNIVVDRYSYSGVAYTAAKG----IDVD 125 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD L + + KR + +E+ V K +QI+ Sbjct: 126 WCYSCEKGLPEPDIVFYLSMSTEDATKR--------GDYGGERYEK--VEFQMKIKQIYE 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + P ++++ + + V+ I I ++ Sbjct: 176 EKLKR-PS-WKVINANRTVEEVSNEINQIFDSELE 208 >gi|302807401|ref|XP_002985395.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii] gi|300146858|gb|EFJ13525.1| hypothetical protein SELMODRAFT_122192 [Selaginella moellendorffii] Length = 229 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 78/201 (38%), Gaps = 19/201 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ +GK++ L FL+ V R P T A ++ L G + Sbjct: 5 KRGALIVLEGLDRSGKSSQCHRLVEFLKGTGLKVEAWRFPDRTTAIGSSISAYLGGGAE- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + + LM G L+ DR+ S A+ + L L+ + Sbjct: 64 LDDRAVHLLFSANRWE-KRLQMERKLMAGTTLVVDRYSYSGVAFSAAKG----LDLEWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V D + LD+ + ++R + +E+ + +K + + Sbjct: 119 APEVGLPAADLVLYLDISPEEA--------AVRGGYGDERYEQ--LDFQKKVALQYKGL- 167 Query: 182 RNQPDRCHIVDSAHSFQSVAT 202 Q R IVD+ SF V Sbjct: 168 --QGKRWKIVDARQSFDQVHE 186 >gi|86152174|ref|ZP_01070386.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94] gi|86153341|ref|ZP_01071545.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612951|ref|YP_001000455.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176] gi|283957252|ref|ZP_06374713.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336] gi|315124289|ref|YP_004066293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|166221735|sp|A1VZB4|KTHY_CAMJJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|85840959|gb|EAQ58209.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 260.94] gi|85843067|gb|EAQ60278.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249371|gb|EAQ72331.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81-176] gi|283791264|gb|EFC30072.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 1336] gi|315018011|gb|ADT66104.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 192 Score = 141 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILK--INQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ P I L ++ +R+ + LD E++ + + + Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163 Query: 185 PDR----CHIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + + I + Sbjct: 164 KEKISIEILTLDAKESKEKLHQQIKEFLQ 192 >gi|223938822|ref|ZP_03630710.1| thymidylate kinase [bacterium Ellin514] gi|223892520|gb|EEF58993.1| thymidylate kinase [bacterium Ellin514] Length = 229 Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG++G+GK+T I LLKR+L+ + + V + A + Sbjct: 12 GRLIAVEGLDGSGKSTQIYLLKRWLELQGFKVFFSEWNSSQLVKSATSK---GKKRELLT 68 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +++ A D E + P L G ++LCDR++ +++A ++ L Sbjct: 69 PTTFSLIHATDFADRYERQLVPLLRAGYLVLCDRYIFTAFARDTV-RGCPPEWVRGLYNF 127 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL-------DYFERKDVMIHEKRRQ 175 + PD T +++ L+R+ R L+ D +E + + + Sbjct: 128 AAH---PDLTFFFKAQLEVSLQRILDGRPQLKYFEAGMDMRLSSDPYESFRI-FQGRILE 183 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 +L ++ ++D+ + V +V ELV ++ Sbjct: 184 QYLAMSTEF--NFSVLDANQPVE-VQQ---TLVRELVAAKI 218 >gi|119591691|gb|EAW71285.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_c [Homo sapiens] Length = 254 Score = 141 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211 >gi|242014820|ref|XP_002428083.1| thymidylate kinase, putative [Pediculus humanus corporis] gi|212512602|gb|EEB15345.1| thymidylate kinase, putative [Pediculus humanus corporis] Length = 601 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 35/211 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I FEG + AGKTT L L + P ++ Sbjct: 416 GALIVFEGCDRAGKTTQCKKLVEKLNELGIKSQFMQFP------------------EDLN 457 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F+A R ++ +++ E L+ DR+ S AY + + Sbjct: 458 DQTVHLLFSANRWENQPKMVKLLHEE-VTLIVDRYSFSGVAYSAAKPGMDF---KWCYKP 513 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD +L +PV++ KR+ + +E D + + + Sbjct: 514 EIGLPKPDLVFLLYVPVNVLKKRI--------GFGEERYENND--FQQSVFDNY---IKM 560 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + D H++D++ + + +IL ++ + Sbjct: 561 KDDTWHLIDASKNINEIHEDILKQTQRIIHE 591 >gi|168181169|ref|ZP_02615833.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916] gi|182667987|gb|EDT79966.1| putative thymidylate kinase [Clostridium botulinum NCTC 2916] gi|322804327|emb|CBZ01877.1| thymidylate kinase [Clostridium botulinum H04402 065] Length = 231 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 88/234 (37%), Gaps = 31/234 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L R+N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVRENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + ++G I++ DR+ S+ +Q + + Sbjct: 61 RDPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173 Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ I+ + ++ S + +I+ I+ + + Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225 >gi|257459649|ref|ZP_05624758.1| thymidylate kinase [Campylobacter gracilis RM3268] gi|257443074|gb|EEV18208.1| thymidylate kinase [Campylobacter gracilis RM3268] Length = 208 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 52/218 (23%), Positives = 88/218 (40%), Gaps = 26/218 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 +++ FEGI+G GK+T I+ L + VT+EPGGT EA R ++L Sbjct: 1 MYVIFEGIDGVGKSTQIARLAAAFPQ----AIVTKEPGGTKLGEAVRSLVLGEDFKWRRG 56 Query: 61 ---------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD- 110 E AE ++F A R +H E VI+ G ++L DR S AY D Sbjct: 57 SVNLREVCGEISKRAELLLFLADRAEHYERVIKG--GAGGLVLSDRGFISGLAYALANDE 114 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L +L + ++ D ++ + R++ R S D E + + Sbjct: 115 GADISELIALNKFALGGKFADKIVLFSADEQLIRHRLKTRASS------DIIEARGLKYL 168 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + +D+A S + + I N + Sbjct: 169 MRVQDLMAQACAACGVETLQIDAAQSEEVICDQIKNFI 206 >gi|57237611|ref|YP_178859.1| thymidylate kinase [Campylobacter jejuni RM1221] gi|86150209|ref|ZP_01068436.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597533|ref|ZP_01100767.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25] gi|205356734|ref|ZP_03223494.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8421] gi|218562394|ref|YP_002344173.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|14285520|sp|Q9PPF3|KTHY_CAMJE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|73920815|sp|Q5HV26|KTHY_CAMJR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|57166415|gb|AAW35194.1| thymidylate kinase [Campylobacter jejuni RM1221] gi|85839325|gb|EAQ56587.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190125|gb|EAQ94100.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 84-25] gi|112360100|emb|CAL34894.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205345373|gb|EDZ32016.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8421] gi|315058220|gb|ADT72549.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni S3] gi|315928307|gb|EFV07623.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929197|gb|EFV08419.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 305] Length = 192 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ P I L ++ +R+ + LD E++ + + + Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163 Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209 ++ + +D+ S + + I + Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192 >gi|6322517|ref|NP_012591.1| Cdc8p [Saccharomyces cerevisiae S288c] gi|1170719|sp|P00572|KTHY_YEAST RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|3318768|pdb|2TMK|A Chain A, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'- Deoxythymidine Monophosphate (Azt-Mp) gi|3318769|pdb|2TMK|B Chain B, Yeast Thymidylate Kinase Complexed With 3'-Azido-3'- Deoxythymidine Monophosphate (Azt-Mp) gi|3318847|pdb|1TMK|A Chain A, Yeast Thymidylate Kinase Complexed With Thymidine Monophosphate (Dtmp) gi|3318848|pdb|1TMK|B Chain B, Yeast Thymidylate Kinase Complexed With Thymidine Monophosphate (Dtmp) gi|4558230|pdb|3TMK|A Chain A, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558231|pdb|3TMK|B Chain B, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558232|pdb|3TMK|C Chain C, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558233|pdb|3TMK|D Chain D, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558234|pdb|3TMK|E Chain E, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558235|pdb|3TMK|F Chain F, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558236|pdb|3TMK|G Chain G, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|4558237|pdb|3TMK|H Chain H, Crystal Structure Of Yeast Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Tp5a At 2.0 A Resolution: Implications For Catalysis And Azt Activation gi|172971|gb|AAB05644.1| thymidylate kinase [Saccharomyces cerevisiae] gi|1015725|emb|CAA89585.1| CDC8 [Saccharomyces cerevisiae] gi|1019679|gb|AAB39283.1| ORF YJR057w [Saccharomyces cerevisiae] gi|151945125|gb|EDN63376.1| thymidylate kinase [Saccharomyces cerevisiae YJM789] gi|285812946|tpg|DAA08844.1| TPA: Cdc8p [Saccharomyces cerevisiae S288c] Length = 216 Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 94/220 (42%), Gaps = 25/220 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 2 MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + + + I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 59 QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 116 Query: 121 QEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + V + PD T+ L D+ + + + +E V EK +Q F Sbjct: 117 LQPDVGLLKPDLTLFLSTQDVD----------NNAEKSGFGDERYE--TVKFQEKVKQTF 164 Query: 178 LDIARNQ----PDRCHIVD-SAHSFQSVATNILNIVWELV 212 + + + + IVD + Q V I IV ++ Sbjct: 165 MKLLDKEIRKGDESITIVDVTNKGIQEVEALIWQIVEPVL 204 >gi|14161247|gb|AAK54673.1|AF251151_2 TMP kinase [Loofah witches'-broom phytoplasma] Length = 209 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 102/213 (47%), Gaps = 12/213 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKTT I L++ L+++ + + + G + R++ L+ ++ Sbjct: 2 KLIVFEGLDGSGKTTLIQELQQKLKKQKINNKIYQGLGSSSIGTEIRNLFLN--YNQVDY 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG---ERDSSQHLFLDSLQ 121 + + +I P L + ++++ DR+L S+YAYQ + + L L Sbjct: 60 ITRFYLSITNMAQIQKELIYPHLKQNQLIILDRWLPSTYAYQLFPYLKQTKSCFDLKELF 119 Query: 122 EISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +I+ + + P I LD+ IG +R Q +++ LD E+K + H+ + + Sbjct: 120 DITHKKLFIQPHLLIYLDINPLIGKERKQ----TQKNHQLDIIEQKSLTYHQTVHKGYYH 175 Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + Q ++ I++ S QS T I+ ++ ++ Sbjct: 176 YLTHYQNNKQLILNGIDSLQSNVTKIMKLIRDI 208 >gi|325914525|ref|ZP_08176869.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937] gi|325539295|gb|EGD10947.1| thymidylate kinase [Xanthomonas vesicatoria ATCC 35937] Length = 226 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 39/226 (17%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V ++EP R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARNLATTLEAAGARVKSSKEPTNGHWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HVE +I PAL G+I++ DR+ S AYQG L+ Sbjct: 65 SADEEAELLIRDRHEHVETLIAPALARGEIVILDRYFPSMVAYQGAAGLPLDALLER-NA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + R IF + P + ++D++ SV L IV + +R+S Sbjct: 163 RCRAIFNAL--QLPGK-QVLDASADADSVLRQALTIVIAALAERLS 205 >gi|319956694|ref|YP_004167957.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511] gi|319419098|gb|ADV46208.1| thymidylate kinase [Nitratifractor salsuginis DSM 16511] Length = 191 Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 17/205 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T I L+ ++ + +TREPGGT E AR +LL + Sbjct: 1 MYVLFEGIDTCGKSTQIRLIA----AEHPEAIITREPGGTRFGEKAREILLEAKLQ--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R +H E ++RP K+L+ DR S Y L +L + Sbjct: 55 RAELLLFLADRAEHYEEIVRP--NRDKLLISDRGFLSGIGYALANGGVSLEELIALNHFA 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +Q PD I + +R+ + E +DY + + EK ++ +A Sbjct: 113 LQGDWPDHIIFFETDEATLRRRLGEKSADGIEERGIDYL----LTVQEKMKEALPKLA-- 166 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 I+D+ S +++ I+ + Sbjct: 167 --IPTLILDARESVETIHQKIVTYL 189 >gi|284926012|gb|ADC28364.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni IA3902] Length = 192 Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 21/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ P I L + +R+ + LD E++ + + + Sbjct: 111 LENFFPQKIIFLKGDASLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163 Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209 ++ + +D+ S + + I + Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192 >gi|310779557|ref|YP_003967890.1| thymidylate kinase [Ilyobacter polytropus DSM 2926] gi|309748880|gb|ADO83542.1| thymidylate kinase [Ilyobacter polytropus DSM 2926] Length = 223 Score = 140 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 87/228 (38%), Gaps = 25/228 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T +L L+ + V P A A + L+ Sbjct: 2 GKLIVIEGTDSSGKQTQTEILYEKLKSQGIKVKKISFPNYDSPASAPVKMYLAGEFGKKA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116 +E + ++A R + +E +++ DR+ S+ +Q + + H + Sbjct: 62 NEVNPYPVSTMYAVDRYASFKKDWEDFYLEAGVVITDRYTTSNMVHQASKFTDPHEKVKY 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L+++ ++ PD L++PVD+ K + +R + KDV + Sbjct: 122 LDWLEDLEYDKMEIPKPDLVFFLNMPVDVAQKLMSDRKNKITGDDAKDIHEKDVEYLKMS 181 Query: 174 RQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q DIA+ + R +D ++ I V E++ Sbjct: 182 HQNACDIAKTYKWKEIMCVEKGRLKKID------EISEEIFEAVKEIL 223 >gi|269962033|ref|ZP_06176387.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833117|gb|EEZ87222.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 127 Score = 140 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 7/130 (5%) Query: 83 IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDI 142 I+PAL + ++ DR SS AYQG + +L++ ++ E P T+ +D+ + Sbjct: 2 IKPALANDQWVVGDRHDLSSQAYQGGGRQIDASLMKNLRDTTLGEFKPAFTLYMDIDPRV 61 Query: 143 GLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202 GL+R + R LD E+ D+ E+ R+ +L +A D ++++ S + VA Sbjct: 62 GLERARGR------GELDRIEKMDISFFERTRERYLALANAD-DSIVVINAEQSIEEVAQ 114 Query: 203 NILNIVWELV 212 +I + E + Sbjct: 115 DIKAALNEWL 124 >gi|255644957|gb|ACU22978.1| unknown [Glycine max] Length = 299 Score = 140 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 81/222 (36%), Gaps = 21/222 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G + EG++ +GK++ S L FL+ + + R P T L + Sbjct: 56 SRGALVVLEGLDRSGKSSQCSRLVPFLEGQGISAELWRFPDRTTNVGQMISAYL-TNTSQ 114 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + +++ L G L+ DR+ S A+ + L + + Sbjct: 115 LDDHTIHLLFSANRWE-KRSLMESKLKTGTTLIVDRYSYSGVAFSSAKG----LDFEWCK 169 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + LD+ + +R + +E+ + +K + + Sbjct: 170 VPEIGLPAPDVVVYLDISPEKAAER--------GGYGGERYEK--LEFQKKVADWYKVL- 218 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPLSS 221 VD+ + V + IV + V ++ SP Sbjct: 219 --HDVSWKDVDACQPIEDVEKQLQEIVLDCVTECRKGSPFPP 258 >gi|307747676|gb|ADN90946.1| Thymidylate kinase [Campylobacter jejuni subsp. jejuni M1] Length = 192 Score = 140 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKTH--QNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ P I L ++ +R+ + LD E++ + + + Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163 Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209 ++ + +D+ S + + I + Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192 >gi|157415037|ref|YP_001482293.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 81116] gi|172047110|sp|A8FLH9|KTHY_CAMJ8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157386001|gb|ABV52316.1| dTMP kinase [Campylobacter jejuni subsp. jejuni 81116] gi|315931181|gb|EFV10153.1| thymidylate kinase [Campylobacter jejuni subsp. jejuni 327] Length = 192 Score = 140 bits (355), Expect = 9e-32, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 21/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ P I L ++ +R+ + LD E++ + + + Sbjct: 111 LENFFPQKIIFLKGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163 Query: 185 PDR----CHIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + + I + Sbjct: 164 KEKISIEILTLDAKESKEKLHQQIKEFLQ 192 >gi|226947280|ref|YP_002802371.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto] gi|226842994|gb|ACO85660.1| putative thymidylate kinase [Clostridium botulinum A2 str. Kyoto] Length = 231 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 31/234 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L +N V P + A + LS Sbjct: 1 MERGRLIVIEGSDGSGKATQTKKLYDKLVTENKKVKKVEFPNYKSESSALIKMYLSGEFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + ++G I++ DR+ S+ +Q + + Sbjct: 61 RNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKDVQAK 120 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 121 DNFLNWLWDFEFRKFNLPVPDCVIFLDMPPKFSKILMKTRNNKFTG------EKEK-DIH 173 Query: 171 EKRRQIFLD-------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ I+ + ++ S + +I+ I+ + + Sbjct: 174 ENNYEYLLESYNNSKYISEKYD--WNRIECTNKDKIKSIDQINDDIIKIITQYI 225 >gi|150402215|ref|YP_001329509.1| thymidylate kinase [Methanococcus maripaludis C7] gi|166221755|sp|A6VFY2|KTHY_METM7 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|150033245|gb|ABR65358.1| dTMP kinase [Methanococcus maripaludis C7] Length = 199 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 52/229 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI FEGI+G GKTT L+ L K T EP ++ R +L Sbjct: 1 MNK--FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREIL---SGS 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E A++FAA R++HV I L + ++ DR++ SS YQ F+ ++ Sbjct: 51 KCQKETLALLFAADRVEHVSK-IEEDLKK-SHVVSDRYVYSSIVYQMS-QGIPKDFIYTI 107 Query: 121 QEISVQEVMPDCTIILDLPV----------DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + + + LKR+++R + FE+ + I Sbjct: 108 NDYAK-------------TPDLVVLLDVDLNEALKRMESREK-------EIFEK--IEIQ 145 Query: 171 EKRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212 +K ++ + + ++ ++ I+D ++ S V ILN + + + Sbjct: 146 KKIKEGYYSLINSENEKFMPKYGFIIIDTTSKSITQVFDEILNAIIDKI 194 >gi|308062738|gb|ADO04626.1| thymidylate kinase [Helicobacter pylori Cuz20] Length = 191 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + VT+EPGGT E RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALVTKEPGGTRMGEHLRHIALN---ESISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+P+ I+L + + +R+ + LD E + +Q A Sbjct: 107 TQSVLPEKIILLLIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + + I+ + Sbjct: 160 KEKFGCEVLELDAQKSVEDLHRQIVAFIE 188 >gi|242309052|ref|ZP_04808207.1| dTMP kinase [Helicobacter pullorum MIT 98-5489] gi|239524476|gb|EEQ64342.1| dTMP kinase [Helicobacter pullorum MIT 98-5489] Length = 189 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 17/206 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ +GK+T I LK LQ + T EPG TP + R +LL ++ + Sbjct: 1 MYVVIEGIDTSGKSTQIQELKLALQ----EAIFTFEPGATPLGKKLRKILLEDSIE-LDS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E ++F A R H +++ K+++ DR L S AY + L + + Sbjct: 56 RTEMLLFLADRAQHTHEILKA--NPDKLIISDRSLISGMAYAKDF---DFETLKAFNLFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q ++P I L+L + +R+Q++ D E++ + + +Q I + Sbjct: 111 TQGILPQKVIFLELQKEDLQQRLQSKNE-------DKIEQRGLEYLLELQQRTKAIIKKL 163 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 +++ ++ I+N + E Sbjct: 164 QLPYISINANLPKTTITQQIINFIKE 189 >gi|16975313|pdb|1E9C|A Chain A, Mutant Human Thymidylate Kinase Complexed With Tmp And Appnp gi|16975314|pdb|1E9D|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With Aztmp And Adp gi|16975315|pdb|1E9E|A Chain A, Mutant Human Thymidylate Kinase (F105y) Complexed With Dtmp And Adp Length = 215 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 7 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S AY G + ++ LD + Sbjct: 66 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAYTGAK---ENFSLDWCK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 172 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLKELW 214 >gi|296206035|ref|XP_002750035.1| PREDICTED: thymidylate kinase-like isoform 1 [Callithrix jacchus] Length = 212 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 LEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVMDRYAFSGVAFSGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ Q F + Sbjct: 119 QPDVGLPRPDLVLFLQLQLADAAKR--------SAFGHERYE--NGAFQERALQCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R+ +VD++ S ++V +IL + + ++ Sbjct: 169 RDTTVNWKMVDASKSIEAVHEDILVLAEDAIR 200 >gi|326925772|ref|XP_003209083.1| PREDICTED: thymidylate kinase-like isoform 1 [Meleagris gallopavo] Length = 212 Score = 140 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 15/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ AGK+T L + LQ + + R P T LS E Sbjct: 5 RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLS-REREL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R +HV + ++ L +G L+ DR+ S A+ + ++ L+ ++ Sbjct: 64 EDHVVHLLFSANRWEHVTS-MKEKLHQGITLVVDRYAFSGVAFTSAK---ENFCLEWCKQ 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 V PD + L L + R + + +E +K Q F + Sbjct: 120 PDVGLPKPDLILFLQLSPEEAAAR--------GNFGRERYENGP--FQKKVLQSFHHLMN 169 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +D++ S + + I + + +Q+ Sbjct: 170 EKTLNWKTMDASKSIEDLHREIKTVAEKTMQE 201 >gi|188528244|ref|YP_001910931.1| thymidylate kinase [Helicobacter pylori Shi470] gi|238691955|sp|B2UVL9|KTHY_HELPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|188144484|gb|ACD48901.1| thymidylate kinase [Helicobacter pylori Shi470] Length = 191 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + VT+EPGGT E RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALVTKEPGGTRMGEHLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+PD I+L + + +R+ ++ LD E + + I +K + + Sbjct: 107 TQSVLPDKIILLLIDKEGLKQRLSHK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I+ + Sbjct: 160 KEQFGCEVLELDAQKSVWDLHRQIVAFIE 188 >gi|261335952|emb|CBH09285.1| putative thymidylate kinase [Heliconius melpomene] Length = 208 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 21/213 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGV 59 + G FI EG++ GKTT L L+ K P T E L S Sbjct: 3 LKRGAFIVIEGVDRTGKTTQAKKLVESLKNKQVSAEYMNFPDRKTDIGEVINSYLTSK-- 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ EA ++F+A R + V N I+ L+ G ++ DR+ S AY + L L Sbjct: 61 NDLSNEAIHLLFSANRWEKV-NYIKEKLLNGITVIVDRYCFSGVAYSAAKG----LDLSW 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD LP L+ VQ R + +E +K ++ Sbjct: 116 CKSPDAGLPKPDKVFFFTLP----LEHVQQRNGF----GSERYE--VPEFQKKVTNTYMK 165 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + D ++D++ S + + ++ V +V Sbjct: 166 LKE---DNWDMLDASRSLEVIHKELVEKVLSVV 195 >gi|254455554|ref|ZP_05068983.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211] gi|207082556|gb|EDZ59982.1| thymidylate kinase [Candidatus Pelagibacter sp. HTCC7211] Length = 204 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 9/212 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ I FEGIEG+GK+ HIS++ ++L +K + REPGG P +E R ++L+ D Sbjct: 1 MSKKPIIVFEGIEGSGKSHHISIVSKYLDKKKINYIKIREPGGNPNSEKIRKLILNNKSD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + +++ AAR ++++ + + + + DRF DS+ AYQ ++ + Sbjct: 61 -FNKNTDLLLYLAARSENIKTIKKYYKKKIIL--IDRFTDSTIAYQHYGMGIDIKIINLI 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + T + + R++ R L+ +++ ++ + K + FL + Sbjct: 118 HKFLLDNISVSFTFLNLVNKKNLYLRLKKRKK------LNRYDKFNMNFYNKVQNGFLKL 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A + + H+V+S + IL + +L+ Sbjct: 172 ANLKKNSYHLVNSNLDIKLNEKLILKKIDKLI 203 >gi|170582308|ref|XP_001896072.1| thymidylate kinase [Brugia malayi] gi|158596802|gb|EDP35082.1| thymidylate kinase, putative [Brugia malayi] Length = 213 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 15/211 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG + AGK+ L ++ DV + P + L V+ Sbjct: 6 RGAFIVFEGCDRAGKSLQSRKLVERIKAAGGDVDLISFPDRSSDLGKFIDRYLKKEVE-M 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +VFAA R + ++ L++G L+ DR+ S AY + + ++ ++ + Sbjct: 65 DPKEAHLVFAANR-QALMPLMMKKLLKGTHLVVDRYAYSGIAYTLAK-GADNITMEWAKL 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLDIA 181 + E+ PDC I +L + KR S D ER D K ++ +A Sbjct: 123 ADMGELRPDCVIYFNLSFEEAQKR---------SGFGD--ERFDFGNFQGKVSKVMEQLA 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 D +VD++ + + ++ N+ N+V ++ Sbjct: 172 DEDRDLWKVVDASLTVEEISENVWNLVAPIL 202 >gi|148926934|ref|ZP_01810611.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8486] gi|145845018|gb|EDK22115.1| putative thymidylate kinase [Campylobacter jejuni subsp. jejuni CG8486] Length = 192 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 21/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPINK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFALNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ P I L+ ++ +R+ + LD E++ + + + Sbjct: 111 LENFFPQKIIFLEGDANLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLEKVLHFL 163 Query: 185 PDRCHI----VDSAHSFQSVATNILNIVW 209 ++ + +D+ S + + I + Sbjct: 164 KEKISVEILTLDAKESKEKLHQQIKEFLQ 192 >gi|159906007|ref|YP_001549669.1| dTMP kinase [Methanococcus maripaludis C6] gi|238686994|sp|A9AAR4|KTHY_METM6 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|159887500|gb|ABX02437.1| dTMP kinase [Methanococcus maripaludis C6] Length = 199 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 52/229 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI FEGI+G GKTT L+ L K T EP ++ R +L Sbjct: 1 MNK--FIVFEGIDGCGKTTQAKLIAERLNAK-----FTFEPTDGKIGKSIREIL---SGS 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E A++FAA R++HV I L + I+ DR++ SS YQ F+ ++ Sbjct: 51 KCQKETLALLFAADRVEHVSK-IEEDLKKSHIV-SDRYVYSSIVYQMS-QGIPKDFIYTI 107 Query: 121 QEISVQEVMPDCTIILDLPV----------DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + + + LKR+++R + FE+ + I Sbjct: 108 NDYAK-------------TPDLVVLLDVDLNEALKRMESREK-------EIFEK--IEIQ 145 Query: 171 EKRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212 +K ++ + + ++ ++ I+D ++ S V ILN + + + Sbjct: 146 KKIKEGYYSLINSENEKFMPTYGFIIIDTTSKSINQVFDEILNAIIDKI 194 >gi|303229617|ref|ZP_07316405.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a] gi|302515742|gb|EFL57696.1| dTMP kinase [Veillonella atypica ACS-134-V-Col7a] Length = 228 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 84/230 (36%), Gaps = 23/230 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T L LQ + + V P A + LS V Sbjct: 2 GTLIILEGGDGSGKATQTKCLVERLQAEGHRVRSVSFPNYDSDASMPIKMYLSGQFGTDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116 D + ++A R + +G I++ DR+ S+ +Q + + + F Sbjct: 62 DSVNPYVASSMYAIDRFASFRMDWQSFYNDGGIIIADRYTTSNMVHQMVKYTDADKRVQF 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L+ L++ PD +LD+P+ + + R D E + + + Sbjct: 122 LEWLEDFEFVKFGLPRPDAVCLLDVPLVVTESLMSERTGKTGGETGDIHEG-NRVYLQAV 180 Query: 174 RQIFLDIARNQPDRCHIVDSAH----------SFQSVATNILNIVWELVQ 213 + ++ H + A S +S+ +I ++V +++ Sbjct: 181 HNAYDELVERYQ--WHRISCAQQDKSGTFTMRSIESIHNDIYDVVKRILR 228 >gi|328853928|gb|EGG03063.1| hypothetical protein MELLADRAFT_44639 [Melampsora larici-populina 98AG31] Length = 222 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 83/231 (35%), Gaps = 27/231 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G F+ EG++ GK+T +L L V + R P H L+ D Sbjct: 5 NRGAFVVIEGLDRCGKSTQCKILADRLTNAGRSVELMRFPDRETVIGKMIHSYLNQESD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117 A ++FAA R + + L G L+CDR+ S A+ + + Sbjct: 64 LDDHAIHLLFAANRWE------KRHLQSGTTLICDRYAFSGVAFTSAKFQLRTPPQPESF 117 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV------MIHE 171 SL +PD I L +P++ + R + +E++D+ + Sbjct: 118 TSLSSPDRGLPLPDLVIFLTMPMEATVTR--------GGFGQERYEKEDLQAEVKRQFEQ 169 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 F + R ++++ S V I V L+ ++ P K Sbjct: 170 VVEPAFTRLHGQ--GRWVEINASGSIDEVTCRISKTVDRLLGSKLDPAVGK 218 >gi|224372857|ref|YP_002607229.1| thymidylate kinase [Nautilia profundicola AmH] gi|254808301|sp|B9L9C1|KTHY_NAUPA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|223588410|gb|ACM92146.1| thymidylate kinase [Nautilia profundicola AmH] Length = 194 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 93/208 (44%), Gaps = 17/208 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I LLK + ++ +EPG T R ++ + D+ Sbjct: 1 MYIALEGIDTAGKSTQIELLKNEYKN---NILFIKEPGFTKFGTKIREIIFN---DDISK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A R + +E ++P L K +L DR + S AY E L +L + + Sbjct: 55 KAELFLFLADRAETIEKFVKPNL--HKNILTDRSVISGIAYAMEF--FDFNMLVNLNKFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P+ IIL L + R+ + D E++ + + +++ Sbjct: 111 TDGIFPEFVIILKLDKETLQYRLSQKNH-------DNIEKRGLDYLINIQDNMIEVCNRL 163 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 ++D++ + + + I ++ E + Sbjct: 164 EIPYLLLDASKNIEEINFRIKKVISEYM 191 >gi|15912289|gb|AAL08278.1| AT5g59440/f2o15_100 [Arabidopsis thaliana] gi|19548005|gb|AAL87366.1| AT5g59440/f2o15_100 [Arabidopsis thaliana] Length = 224 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 83/212 (39%), Gaps = 19/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T + L FL + + R P + LS + Sbjct: 19 RGALIVLEGLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQL 77 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + +++ L G L+ R+ S A+ + L ++ + Sbjct: 78 DDHTIHLLFSANRWE-KRSLMEEKLKTGTTLIVYRYSYSGVAFSSAKG----LDIEWCKA 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD + LD+ + +R + +ER V +K + + Sbjct: 133 PEIGLLAPDSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTLGD 182 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + I++++ + + V I +V + V++ Sbjct: 183 SS---WKIINASDAMEEVEKKIQQVVLDQVKE 211 >gi|222445925|ref|ZP_03608440.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii DSM 2375] gi|222435490|gb|EEE42655.1| hypothetical protein METSMIALI_01573 [Methanobrevibacter smithii DSM 2375] Length = 192 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 28/206 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63 ++I FEGI+GAGK+T I+LLK +L++ +DV EP + + R +L + Sbjct: 1 MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++FAA R+ +I L + K++L DR SS AYQ +++ + + Sbjct: 61 QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ-----EPAEWIEQINK 110 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P + L V + S+ + D FE + K + +LD+ Sbjct: 111 YAKE------------PDLVLLLDVDVKTSVNRCSKEDEFENE--EFLSKVKANYLDLIS 156 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N +D++ V+T+I V Sbjct: 157 NFNHEI--IDASTGVNKVSTDIKKAV 180 >gi|296273496|ref|YP_003656127.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299] gi|296097670|gb|ADG93620.1| thymidylate kinase [Arcobacter nitrofigilis DSM 7299] Length = 188 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 53/205 (25%), Positives = 97/205 (47%), Gaps = 20/205 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ AGK+T + +L + + T+EPG T R + L+ Sbjct: 1 MYVVIEGIDTAGKSTQLEILSKKFS----NAIFTKEPGATKLGSKLREMALNGEAK--SK 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI+P + K+++ DR + S AY S + +L I+ Sbjct: 55 IAEMFLFLADRAEHIEEVIKPNID--KMIISDRSVISGIAY---ASSLPIEVVTTLNLIA 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +P TI+L+L D KR+ N+ ES +DY + I + ++ +D+ Sbjct: 110 TENTLPSHTILLELSKDELTKRLGNKSNDSIESRGIDYL----IDIQNRMKKT-IDLLSL 164 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +D++ S + +A I + + Sbjct: 165 N---YIFIDASLSIEEIAKRIEDFI 186 >gi|310830106|ref|YP_003962463.1| putative thymidylate kinase [Eubacterium limosum KIST612] gi|308741840|gb|ADO39500.1| putative thymidylate kinase [Eubacterium limosum KIST612] Length = 228 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 82/221 (37%), Gaps = 15/221 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57 N G I EG++G+GK T L L+R+ V P A+ A + LS Sbjct: 3 NKGQLIVIEGVDGSGKQTQTEKLYDRLKREGQRVMKVSYPRYDKASSAMVRLYLSGAFGN 62 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115 D + +AA R + +G I++ DR+ S+ +Q + S Sbjct: 63 DPDSISPYIASTFYAADRYASYKEDYETFYRDGGIVIADRYTTSNMVHQAGKISDPEERV 122 Query: 116 -FLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIH 170 F+D L + + +PD L++P +I K ++ R + D E+ + Sbjct: 123 RFMDWLSDYEFNKMELPVPDAVFFLNIPPEINFKLMEGRANKITGEAEKDIHEKSPEHLL 182 Query: 171 EKRRQIFLDIARNQP--DRCHIVDSA-HSFQSVATNILNIV 208 + L++ + + + S + + I V Sbjct: 183 HAYQNA-LELIEKYNWTEIVCVSEGKLRSIEDIHEEIYERV 222 >gi|300120775|emb|CBK21017.2| unnamed protein product [Blastocystis hominis] Length = 208 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 19/216 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59 M G+FI EG++ +GKT+ + L ++ P T + L Sbjct: 1 MKRGVFIVIEGVDRSGKTSQCHRIVERLNAEDITAKFYGFPNRTTQIGQQINKYL--QNA 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E ++F+A R + + I L G ++CDR++ S AY R L ++ Sbjct: 59 TEIENHCVHLLFSANRWE-LSKSILEDLKNGVNIICDRYIASGVAYSVTRG----LDMEW 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD T L+LP++ ++R + E + + + F Sbjct: 114 CIHSDKGLPAPDVTFQLELPIEEQMRRA--------GFGEERLETR--EFQQSVAEAFRR 163 Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ P V + S V + +V + Sbjct: 164 LSSEFYPYTWTPVSALGSIDEVHERLYGLVKNAISD 199 >gi|168050195|ref|XP_001777545.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671030|gb|EDQ57588.1| predicted protein [Physcomitrella patens subsp. patens] Length = 226 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 83/212 (39%), Gaps = 19/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK++ + L +L+ + V R P T A LSC D Sbjct: 15 RGALIVLEGLDRSGKSSQCAQLASYLESQGVAVEAWRFPDRTTAMGRMISSYLSCQTD-L 73 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A A ++F+A R + ++ L G L+ DR+ S A+ + L LD + Sbjct: 74 DAAAIHLLFSANRWEKCS-LMESKLKAGTTLVIDRYSYSGVAFSVAKG----LDLDWCKG 128 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD LD+ ++ R + +E+ + I +K ++F + Sbjct: 129 PEAGLPAPDLVFYLDISAEVAAAR--------GGYGGERYEK--LEIQKKVEKVFKSLKD 178 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 VD+ S S+ + + + + + Sbjct: 179 T---TWQSVDATQSIDSIQSVLREESVKAINE 207 >gi|153951111|ref|YP_001398306.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97] gi|166221734|sp|A7H476|KTHY_CAMJD RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|152938557|gb|ABS43298.1| thymidylate kinase [Campylobacter jejuni subsp. doylei 269.97] Length = 192 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 90/209 (43%), Gaps = 21/209 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEGI+ GK+T ISLLK + D T EPGGT + R +LL+ Sbjct: 1 MYVVFEGIDCVGKSTQISLLKEIYK----DAIFTLEPGGTELGKHLREILLN-KTHPISK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H E +++ + K+++ DR S AY + ++ L +L + Sbjct: 56 RAELLLFLADRAQHFEEILKT--NQNKLIISDRSFISGMAYAKDF---ENDLLFTLNSFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +++ P I L ++ +R+ + LD E++ + + + Sbjct: 111 LEDFFPQKIIFLKGDENLIQERLSQK-------ELDSIEKRGIEYFLSVQDKLKKVLHFL 163 Query: 185 PDR----CHIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + + I + Sbjct: 164 KEKISIEILTLDAKESKEKLHQQIKEFLQ 192 >gi|34557029|ref|NP_906844.1| thymidylate kinase [Wolinella succinogenes DSM 1740] gi|81653541|sp|Q7M9X1|KTHY_WOLSU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|34482744|emb|CAE09744.1| INTEGRAL MEMBRANE PROTEIN WITH KINASE ACTIVITY [Wolinella succinogenes] Length = 190 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 24/205 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EG++ GK+T I+LLKR T+EPGGT R +LL G + A Sbjct: 1 MYVAIEGVDTCGKSTQIALLKRRFPG----AIFTKEPGGTALGMKLRELLL--GGEAKSA 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R +H+E VI+PAL K+L DR L S AY L+L SL + Sbjct: 55 KAELLLFLADRAEHMELVIKPALD--KLLFSDRSLISGMAY---AKGWDELWLKSLNLFA 109 Query: 125 VQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ--IFLDIA 181 + ++PD +IL+L ++ + Q + ES ++Y + + E+ +Q L I Sbjct: 110 TEGIVPDKVVILELTAKELSYRLSQKSHDSIESRGVEYL----LELQERIKQMTALLGI- 164 Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206 P + ++ S + + I++ Sbjct: 165 ---PS--LTLSASLSPEEIHGRIVS 184 >gi|291415046|ref|XP_002723764.1| PREDICTED: thymidylate kinase isoform 1 [Oryctolagus cuniculus] Length = 212 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 81/211 (38%), Gaps = 15/211 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L+ + + R P + L + Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V I+ L +G L+ DR+ S A+ + ++ L+ + Sbjct: 63 VEDHSVHLLFSANRWEQVP-FIKEKLSQGVTLVVDRYAFSGVAFTSAK---ENFSLEWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + R + +E + E+ Q F + Sbjct: 119 QPDVGLPRPDLVLFLQLKLAEAASR--------GEFGCERYESR--AFQERALQGFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R+ +VD++ S + V I + + + Sbjct: 169 RDPSLNWKMVDASKSIEDVHEEIRALSEDAI 199 >gi|125559330|gb|EAZ04866.1| hypothetical protein OsI_27045 [Oryza sativa Indica Group] gi|125601251|gb|EAZ40827.1| hypothetical protein OsJ_25303 [Oryza sativa Japonica Group] gi|215769070|dbj|BAH01299.1| unnamed protein product [Oryza sativa Japonica Group] Length = 253 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 86/223 (38%), Gaps = 25/223 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GK++ + L FLQ K R P GT + L E Sbjct: 50 RGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYL--ANESE 107 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + ++ L+ G L+ DR+ S A+ + L ++ + Sbjct: 108 LDDRTIHLLFSANRWE-KRALMERKLLGGTTLIVDRYSYSGVAFSAAKG----LDIEWCK 162 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + LD+ + +R + +E+ + +K + + + Sbjct: 163 APENGLIAPDLVVYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVGEHYHSLR 212 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI----VWELVQKRVSPLS 220 + +VD + + V + + + E K+++ L+ Sbjct: 213 DS---TWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLASLA 252 >gi|169334897|ref|ZP_02862090.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM 17244] gi|169257635|gb|EDS71601.1| hypothetical protein ANASTE_01303 [Anaerofustis stercorihominis DSM 17244] Length = 227 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 86/227 (37%), Gaps = 13/227 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 MN G EG++G+GK T L+ + L+ + ++V P + A + L+ Sbjct: 1 MNKGKLFVIEGLDGSGKQTQSELITKRLKEEGHNVIRASYPNYKSQSSALVKMYLNGDFG 60 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D+ + + +A R + + G I++ DR++ S+ +QG + + Sbjct: 61 KNADDIDPKVASTFYAVDRYATYKKEYEDFYLNGGIIIADRYVTSNMVHQGCKIKDVEKK 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L + + PD LD+ ++ +++R + + D Sbjct: 121 EEYLDWLLDFEYNIFKIPKPDKVFFLDIDPEVSKALIKDRDNKFTNESKKDIHESDYEYL 180 Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELVQK 214 + + DR V + S + + + + + +++ Sbjct: 181 MSAYENVNFLVDKYGFDRIECVKESSLKSIEEINDILYKKITKDLRR 227 >gi|42528099|ref|NP_973197.1| thymidylate kinase [Treponema denticola ATCC 35405] gi|41819144|gb|AAS13116.1| thymidylate kinase [Treponema denticola ATCC 35405] Length = 209 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 27/217 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 F+ FEGI+G+G T+ I LLK + ++ V T+EP P R L G + Sbjct: 6 FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63 Query: 64 AEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DS 119 E +FAA R +H+ I + +G+ + DR++ SS AYQ ++ L D Sbjct: 64 PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAADLAKLQNDG 123 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 DLPVDI + RV R ++ E ++ K + + Sbjct: 124 FPLPEFLFFF-------DLPVDISMNRVMGRSNVLEIY-------EEKTFQYKVQDEYKK 169 Query: 180 IARN----QPD-RCHIVDSAHSFQSVATNILNIVWEL 211 I +P+ I+++ + + + +I+ +L Sbjct: 170 IIDEYRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206 >gi|71030486|ref|XP_764885.1| thymidylate kinase [Theileria parva strain Muguga] gi|68351841|gb|EAN32602.1| thymidylate kinase, putative [Theileria parva] Length = 213 Score = 139 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 82/212 (38%), Gaps = 18/212 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEGI+ +GK+T I LL + L +N +T TP + R L + Sbjct: 8 RGKLIVFEGIDRSGKSTQIRLLSQKLSEENIKNEVLTFPYKTTPTGKLLRS-YLGNRDES 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +A ++F+A R + + +I+ L G ++ DR+ S AY + + Sbjct: 67 IPKQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAYSVGAEGLDF---NWCL 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD +DL + R + + +E ++ E ++F Sbjct: 123 IPDTGIVEPDIVFYMDLAPECSSAR--------GNFGSEIYE--NLENMENVYEVFKRF- 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + + H + I +I ++++ Sbjct: 172 -GNLSYWNNIKANHDRDQIHEKIYSITKKVIE 202 >gi|291221635|ref|XP_002730837.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 211 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 79/213 (37%), Gaps = 18/213 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + GK+T L L + R P + + L + Sbjct: 6 RRGALIVLEGCDRCGKSTQARKLVDTLVAGGTPAELWRFPERSSSIGQLIGSYLEKKSE- 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + V +R L +G ++ DR+ S A+ ++ ++ + Sbjct: 65 VEDHAIHLLFSANRWESVPR-MRKLLQDGTTVVVDRYAYSGVAFTAAKEGFD---IEWCK 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + L + + KR + +E+ D ++ ++ + Sbjct: 121 QPDRGLPEPDLVLYLTIGAEDAAKRA--------DFGGERYEQTD--FQKRVADMYGLLR 170 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 DR +D++ S + + I + +++ + Sbjct: 171 E---DRWETLDASQSIKDLHDQIAKLTRDIITR 200 >gi|149193824|ref|ZP_01870922.1| thymidylate kinase [Caminibacter mediatlanticus TB-2] gi|149135777|gb|EDM24255.1| thymidylate kinase [Caminibacter mediatlanticus TB-2] Length = 193 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 96/210 (45%), Gaps = 19/210 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EGI+ AGK+T I LLK+ + +EPG T + R +LL+ ++ Sbjct: 1 MYIAIEGIDTAGKSTQIELLKKEF-----NAIFIKEPGFTSFGKKIREILLN---EDISK 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE +F A R + +E V++P + K+++ DR + S AY E L +L + + Sbjct: 53 KAELFLFLADRSETIEEVVKPNIN--KLIISDRSVISGIAYAMEF--FDFDMLVNLNKFA 108 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + P+ IIL L + R+ + D E++ + K + + Sbjct: 109 TDSIFPEFVIILKLEKKDLIYRLSQKEK-------DSIEKRGIEYLLKIQDNIIATCNRL 161 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++D++ + + + I + L+++ Sbjct: 162 EIPYLLLDASKNIEEINFRIKKAISGLIKR 191 >gi|261349531|ref|ZP_05974948.1| dTMP kinase [Methanobrevibacter smithii DSM 2374] gi|288861895|gb|EFC94193.1| dTMP kinase [Methanobrevibacter smithii DSM 2374] Length = 192 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 28/206 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63 ++I FEGI+GAGK+T I+LLK +L++ +DV EP + + R +L + Sbjct: 1 MYIVFEGIDGAGKSTQINLLKDWLEQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++FAA R+ +I L + K++L DR SS AYQ +++ + + Sbjct: 61 QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ-----EPAEWIEQINK 110 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P + L V + S+ + D FE + K + +LD+ Sbjct: 111 YAKE------------PDLVLLLDVDVKTSVNRCSKEDEFENE--EFLSKVKANYLDLIS 156 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N +D++ V+T++ V Sbjct: 157 NFNHEI--IDASTGVNKVSTDVKKAV 180 >gi|317178179|dbj|BAJ55968.1| thymidylate kinase [Helicobacter pylori F16] Length = 191 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ESISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQGVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKIKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I+ + Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIIAFIE 188 >gi|167393075|ref|XP_001740414.1| thymidylate kinase [Entamoeba dispar SAW760] gi|165895464|gb|EDR23144.1| thymidylate kinase, putative [Entamoeba dispar SAW760] Length = 210 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 18/213 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GL I EGI+ +GK++ + L++K P + L Sbjct: 4 NRGLLIVLEGIDQSGKSSAAQRVCEMLEKKGIQSIKQPFPDRSTDIGKLIDEFLHGKN-- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++++A R + V I+ L +G ++CDR+ S Y + Sbjct: 62 LPQQVVHLLYSANRWE-VAQKIKETLEKGITIICDRYAFSGIVYSIANGLDE----RWCN 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD L+L ++ +R R++ D +E ++ K + + Sbjct: 117 SADSGLPKPDIVFFLELSLEDAEQR-------RKTMKTDRYE--NIKFQSKVKCEYEKF- 166 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +D+ S + VA I +I+ + + + Sbjct: 167 -KDSMKWTCIDARQSKEEVALEITSIIEQQLPQ 198 >gi|256419682|ref|YP_003120335.1| thymidylate kinase [Chitinophaga pinensis DSM 2588] gi|256034590|gb|ACU58134.1| thymidylate kinase [Chitinophaga pinensis DSM 2588] Length = 228 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 93/227 (40%), Gaps = 19/227 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS--C 57 N+ FI+ EG++GAGK+T I+LL++F ++ + P E L Sbjct: 3 NNSRFIAIEGLDGAGKSTQINLLQQFFNQQGIETRFVHFPIVQEGVFGEMIAKFLRGEFG 62 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQH 114 V + + A++FA R + I L G ++L DR++ S+ A+Q + D + Sbjct: 63 DVKDVHPQLVALLFAEDRK-AFSHTINEWLASGYVVLVDRYVLSNIAFQCAKLKTDKEKQ 121 Query: 115 LFLDSLQEISV---QEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVM 168 D + + PD ++ LD+P + L R ++ + D KD Sbjct: 122 ELRDWINMFEYEYNRIPQPDLSVYLDVPFSHTEQALARRRSGEDRKYLNGKDDIHEKDFS 181 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWE 210 + ++ + +A IV + S + + I++ + + Sbjct: 182 LQLAVKREYEILADTDATVTKIVCYDQDNKMRSVEEIHAAIIHNITK 228 >gi|198417043|ref|XP_002128464.1| PREDICTED: similar to deoxythymidylate kinase [Ciona intestinalis] Length = 209 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 86/225 (38%), Gaps = 23/225 (10%) Query: 1 MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSC 57 M G I EG++ +GKTT L L KN V + + P T + L+ Sbjct: 1 MKVGRGALIVVEGLDRSGKTTQCQKLITALNEKNQKVKLLKFPDRTTEIGKTINSYLVKK 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A ++F+A R + +++ L +G L+ DR+ S A+ + + L Sbjct: 61 SN--LDDRAIHLLFSANRWEKRSEMLQD-LNDGVTLIVDRYAYSGAAFSAAKKGLE---L 114 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D + PD + L+L + R + +E +K F Sbjct: 115 DWCKSPDSGLPQPDLVLFLELSTSVAATR--------GGYGEERYE--TTEFQKKVALNF 164 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLSS 221 + + ++D+ V ++L+ V + ++K ++ P+ + Sbjct: 165 HGLKTEE---WKVIDAGRDMFEVHQDMLSFVEKTMEKVKLQPVGT 206 >gi|317179651|dbj|BAJ57439.1| thymidylate kinase [Helicobacter pylori F30] Length = 191 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+ENVI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIENVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I + Sbjct: 160 KEKFGCEILELDAQKSVGDLHRQIAAFIE 188 >gi|325474687|gb|EGC77873.1| thymidylate kinase [Treponema denticola F0402] Length = 209 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 27/217 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 F+ FEGI+G+G T+ I LLK + ++ V T+EP P R L G + Sbjct: 6 FVVFEGIDGSGTTSQIRLLKERFESEDKSSLVSFTQEPTSGPIGTLIRSAL--QGSFKLA 63 Query: 64 AEAEAIVFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-- 119 E +FAA R +H+ I + +G+ + DR++ SS AYQ ++ L + Sbjct: 64 PETMTRLFAADRCEHIYGLQGILKQVNDGRAVFSDRYVFSSLAYQTAAGAADLAKLQNEG 123 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 DLPVDI + RV R ++ E ++ K + + Sbjct: 124 FPLPEFLFFF-------DLPVDISMNRVMGRSNVLEIY-------EEKTFQYKVQDEYKK 169 Query: 180 IARN----QPD-RCHIVDSAHSFQSVATNILNIVWEL 211 I +P+ I+++ + + + +I+ +L Sbjct: 170 IIDEYRLKEPNMNIVIINAVEQIEEIHEKLWSILKDL 206 >gi|308185243|ref|YP_003929376.1| thymidylate kinase [Helicobacter pylori SJM180] gi|308061163|gb|ADO03059.1| thymidylate kinase [Helicobacter pylori SJM180] Length = 191 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKIGENLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q ++P+ I+L + + GLK R SL+ LD E + +Q A Sbjct: 107 TQSILPEKIILLVID-EEGLK---QRLSLK---SLDKIENQGTEKLLTIQQKLKTHAYAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +++ S +++ I + Sbjct: 160 KEKFGCEVLELNAKESVKNLHEQITAFIE 188 >gi|19076042|ref|NP_588542.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe 972h-] gi|14286144|sp|P36590|KTHY_SCHPO RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|3192027|emb|CAA19357.1| thymidylate kinase Tmp1 [Schizosaccharomyces pombe] Length = 210 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 82/211 (38%), Gaps = 21/211 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVD 60 N G I EG++ +GK+T LL L ++ + + P T + L Sbjct: 5 NRGRLIVIEGLDRSGKSTQCQLLVDKLISQHEKAELFKFPDRTTAIGKKIDDYLKES--V 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + + I + +G + DR+ S A+ + L + Sbjct: 63 QLNDQVIHLLFSANRWETI-QYIYEQINKGVTCILDRYAFSGIAFSAAKG----LDWEWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L++ I R + +E+ + + EK + F + Sbjct: 118 KSPDRGLPRPDLVIFLNVDPRIAATR--------GQYGEERYEK--IEMQEKVLKNFQRL 167 Query: 181 ARNQPD---RCHIVDSAHSFQSVATNILNIV 208 + + +D++ S + V + I+++V Sbjct: 168 QKEFREEGLEFITLDASSSLEDVHSQIVDLV 198 >gi|222823749|ref|YP_002575323.1| thymidylate kinase [Campylobacter lari RM2100] gi|254808285|sp|B9KG87|KTHY_CAMLR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|222538971|gb|ACM64072.1| thymidylate kinase [Campylobacter lari RM2100] Length = 194 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 20/210 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+FEG++ GK+T I LLK+ + D T+EPGG+ R +LL + +F Sbjct: 1 MYIAFEGVDCVGKSTQIELLKKCFK----DAIFTKEPGGSELGVHLRKILLESKM-QFSK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R + ++ I + K+++ DR S+ AY + L L + Sbjct: 56 KAELLLFLADRANLID--IHLVQNKNKLIISDRSFVSNMAY--AKFDFDQNILFDLNSFA 111 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LDIA 181 P + L ++ +R+ + LD E++ V + L+I Sbjct: 112 TGGFFPQKIVFLHGSKELIEQRLSKKN-------LDSIEKRGVEYFLNIQNALEETLEIL 164 Query: 182 RNQPD-RCHIVDSAHSFQSVATNILNIVWE 210 + + D + +D++ S +++ I + + Sbjct: 165 KTKIDIKILKLDASLSIENLHEKIKEFIND 194 >gi|270669144|ref|ZP_06222575.1| dTMP kinase [Haemophilus influenzae HK1212] gi|270316610|gb|EFA28429.1| dTMP kinase [Haemophilus influenzae HK1212] Length = 111 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 50/109 (45%), Positives = 65/109 (59%), Gaps = 1/109 (0%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG+EGAGK++ + R L DV TREPGGTP AE RH++ + Sbjct: 2 KGKFIVIEGLEGAGKSSAHQSVVRVLHELGIQDVVFTREPGGTPLAEKLRHLIKHEIEEP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 +AE ++ AAR+ VENVI+PALM+GK ++ DR SS AYQG Sbjct: 62 VTDKAELLMLYAARIQLVENVIKPALMQGKWVVGDRHDMSSQAYQGGGR 110 >gi|326480672|gb|EGE04682.1| thymidylate kinase [Trichophyton equinum CBS 127.97] Length = 235 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 86/214 (40%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G + EG++ AGK+T + L +FL + ++ R P T A + L G + Sbjct: 11 RRGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYL-RGEIQ 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + IR + G ++ DR+ S Y +++ + LD Sbjct: 70 LDDHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD L++ ++ R + +E V + +K ++FL + Sbjct: 128 RPEVGLPRPDIWFFLNISTEVAAAR--------GGYGTERYE--TVNLQKKVGKLFLSLT 177 Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +VD+ ++ I V + + K Sbjct: 178 GLKGNEDMRVVDAGREIDEISREIQEEVLQTMAK 211 >gi|308064233|gb|ADO06120.1| thymidylate kinase [Helicobacter pylori Sat464] Length = 191 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++G GK+T + LLK + + T+EPGGT E R + L+ + Sbjct: 1 MYVVLEGVDGVGKSTQVGLLKDRFK----NALFTKEPGGTRMGEHLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+PD I+L + + +R+ + LD E + +Q A Sbjct: 107 TQSVLPDKIILLLIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + I+ + Sbjct: 160 KEKFGCEVLELDAQKSVWDLHRQIVAFIE 188 >gi|312067737|ref|XP_003136884.1| thymidylate kinase [Loa loa] gi|307767957|gb|EFO27191.1| thymidylate kinase [Loa loa] Length = 213 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 84/210 (40%), Gaps = 13/210 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI FEG + GK+ L ++ +V + P + L V+ Sbjct: 6 RGAFIVFEGCDRVGKSLQSRKLVERIKATGGNVDLISFPDRSSDLGKFIDRYLKKEVE-M 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +VFAA R + +++ L +G L+ DR+ S AY + + ++ ++ + Sbjct: 65 EPKEAHLVFAANRQALMPLMVKELL-KGTHLVVDRYAYSGIAYTLAK-GADNVTMEWAKL 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + E+ PDC I +L + KR + F+ K I +A Sbjct: 123 ADMGELKPDCVIYFNLSFEEAQKR--------SGFGDERFDSGS--FQGKVNDIMEKLAA 172 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 D +VD++ + ++ N+ +V ++ Sbjct: 173 EDRDLWKVVDASLPIEVISENVWKLVSPIL 202 >gi|315049351|ref|XP_003174050.1| thymidylate kinase [Arthroderma gypseum CBS 118893] gi|311342017|gb|EFR01220.1| thymidylate kinase [Arthroderma gypseum CBS 118893] Length = 237 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G + EG++ AGK+T + L +FL + + R P T + + L + Sbjct: 13 RRGALVVVEGLDRAGKSTQCTRLHQFLVDQGHKAKYIRFPDRTTSIGKMINQYL-RAEIQ 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + IR + G ++ DR+ S Y +++ + LD Sbjct: 72 LDDHAVHLLFSANRWEAAAQ-IRQDIEAGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 129 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD L++ ++ R + +E V + ++ ++FL ++ Sbjct: 130 RPEVGLPRPDIWFFLNISTEVAAAR--------GGYGTERYE--TVNLQQRVGKLFLSLS 179 Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + IVD+ ++++I + V + + K Sbjct: 180 GLKGNEDMRIVDAGREMDEISSDIRDEVLQTMTK 213 >gi|14488796|pdb|1E2D|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Monophosphate, Adenosine Diphosphate And A Magnesium-Ion gi|14488797|pdb|1E2E|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Monophosphate, Adenosine Diphosphate,A Magnesium-Ion And Alf3 gi|14488798|pdb|1E2F|A Chain A, Human Thymidylate Kinase Complexed With Thymidine Monophosphate, Adenosine Diphosphate And A Magnesium-Ion gi|14488799|pdb|1E2G|A Chain A, Human Thymidylate Kinase Complexed With Adp, Tdp And A Magnesium-Ion gi|14488800|pdb|1E2Q|A Chain A, Human Thymidylate Kinase Complexed With Tp5a And A Magnesium-Ion gi|16975361|pdb|1E99|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Adp gi|16975362|pdb|1E9A|A Chain A, Human Thymidylate Kinase Complexed With The Bisubstrate Inhibitor Aztp5a gi|16975363|pdb|1E9B|A Chain A, Human Thymidylate Kinase Complexed With Aztmp And Appnp gi|29726714|pdb|1NMX|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp And Adp gi|29726716|pdb|1NMZ|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Nh2tmp And Appnhp gi|29726717|pdb|1NN0|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp And Adp gi|29726718|pdb|1NN1|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Ddtmp And Appnhp gi|29726719|pdb|1NN3|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp + Adp gi|29726720|pdb|1NN5|A Chain A, Crystal Structure Of Human Thymidylate Kinase With D4tmp + Appnhp Length = 215 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 7 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 66 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 172 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELW 214 >gi|49456925|emb|CAG46783.1| DTYMK [Homo sapiens] Length = 212 Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHSAHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211 >gi|261838748|gb|ACX98514.1| thymidylate kinase [Helicobacter pylori 51] Length = 191 Score = 138 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LTRAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+P+ I+L + + +R+ + LD E + +Q A Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKAHAYAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + I + Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188 >gi|217033894|ref|ZP_03439318.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10] gi|216943657|gb|EEC23102.1| hypothetical protein HP9810_870g26 [Helicobacter pylori 98-10] Length = 191 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLKN-------LDKIENQGIEKLLTIQQKLKTHTYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I + Sbjct: 160 KEKFGCEILELDAQKSVGDLHRQIAAFIE 188 >gi|188587973|ref|YP_001919632.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43] gi|188498254|gb|ACD51390.1| thymidylate kinase [Clostridium botulinum E3 str. Alaska E43] Length = 225 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 79/225 (35%), Gaps = 13/225 (5%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57 M G I E G + +GK T L L + Y++ P A + LS Sbjct: 1 MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSGEF 60 Query: 58 --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113 ++ A + FA R + G I++ DR+ S+ +Q + + + Sbjct: 61 GNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMDEEEK 120 Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L + +PDC + LD+ +I K +++R + + Sbjct: 121 DKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDRNNKFTGEKEKDIHENNKDYL 180 Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELV 212 K L+IA D+ D + + + I V + Sbjct: 181 AKSYYNSLEIAERYNWDKIKCNDGDNLKTIEEIHEEIYKKVKNYI 225 >gi|296122456|ref|YP_003630234.1| thymidylate kinase [Planctomyces limnophilus DSM 3776] gi|296014796|gb|ADG68035.1| thymidylate kinase [Planctomyces limnophilus DSM 3776] Length = 236 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 22/232 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGV- 59 +SGL I EGI+GAGK T LL L+ + DV P R L+ Sbjct: 10 SSGLLIVIEGIDGAGKGTQTKLLHERLKSTSRDVFTLSFPRYESTFFGQRVADFLNGRFG 69 Query: 60 --DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSS 112 ++ A+++A R + ++++ AL EGKI+LCDR++ S+ A+Q + + Sbjct: 70 TLEQVHPFLAAMLYAGDRFES-RDLLQSALNEGKIVLCDRYIPSNLAHQLTKAQPELRAE 128 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFERKDVMI 169 +++ ++ Q PD ++LD + + R Q R A L D Sbjct: 129 MQQWIEHVEYHLYQMPRPDLVVLLDTTAETATTLIDRKQARDYTTSKADL---HEADQHY 185 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAH-----SFQSVATNILNIVWELVQKRV 216 E+ + ++A N P H+V S +A I V + +R+ Sbjct: 186 LERVLIEYRNLAANNPL-WHVVPCLQNSILRSQTEIAEEIYTFVESFISRRI 236 >gi|251779252|ref|ZP_04822172.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083567|gb|EES49457.1| dTMP kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 225 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 79/225 (35%), Gaps = 13/225 (5%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57 M G I E G + +GK T L L + Y++ P A + LS Sbjct: 1 MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSGEF 60 Query: 58 --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113 ++ A + FA R + G I++ DR+ S+ +Q + + + Sbjct: 61 GNKPEDVNAYVASTFFAIDRFASYNKEWKEFYDNGGIIISDRYTTSNMVHQAVKMDEEEK 120 Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L + +PDC + LD+ +I K +++R + + Sbjct: 121 DKYLDWLYNLEFNLYKLPVPDCVMFLDVLPEISQKLMKDRNNKFTGEKEKDIHENNKDYL 180 Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELV 212 K L+IA D+ D + + + I V + Sbjct: 181 AKSYYNSLEIAERYNWDKIKCNDGDSLKTIEEIHEEIYKKVKNYI 225 >gi|148642580|ref|YP_001273093.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061] gi|166987705|sp|A5UKJ7|KTHY_METS3 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|148551597|gb|ABQ86725.1| thymidylate kinase, Tmk [Methanobrevibacter smithii ATCC 35061] Length = 192 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 92/206 (44%), Gaps = 28/206 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63 ++I FEGI+GAGK+T I+LLK +L + +DV EP + + R +L + Sbjct: 1 MYIVFEGIDGAGKSTQINLLKDWLDQNGFDVETVVEPTDSEVGKLIRKILQRPDATTDRI 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++FAA R+ +I L + K++L DR SS AYQ +++ + + Sbjct: 61 QKTLGLLFAADRM-----LIMDKLNDDSKVILSDRSFISSLAYQ-----EPAEWIEQINK 110 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P + L V + S+ + D FE + K + +LD+ Sbjct: 111 YAKE------------PDLVLLLDVDVKTSVNRCSKEDEFENE--EFLSKVKANYLDLIS 156 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 N +D++ V+T+I V Sbjct: 157 NFNHEI--IDASTGVNKVSTDIKKAV 180 >gi|187934501|ref|YP_001884434.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B] gi|187722654|gb|ACD23875.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B] Length = 225 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 44/225 (19%), Positives = 80/225 (35%), Gaps = 13/225 (5%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-- 57 M G I E G + +GK T L L + Y++ P A + LS Sbjct: 1 MTKGKLIIIESGSDASGKATQAKKLYERLLEEGYNIKKITYPNYDSPACMPVKMYLSGEF 60 Query: 58 --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113 ++ A + FA R + G I++ DR+ S+ +Q + + + Sbjct: 61 GNKPEDVNAYVASTFFAIDRFASYNKEWKDFYDNGGIIISDRYTTSNMVHQAVKMDEEEK 120 Query: 114 HLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L + +PDC + LD+ +I K +++R + + Sbjct: 121 DKYLDWLYNLEFNLYKLPIPDCVMFLDVLPEISQKLMKDRNNKFTGEKEKDIHENNKDYL 180 Query: 171 EKRRQIFLDIARNQP-DRCHIVDSA--HSFQSVATNILNIVWELV 212 K L+IA D+ D + + + I V + + Sbjct: 181 AKSYYNSLEIAEKYNWDKIKCNDGDNLKTIEEIHEEIYKKVKKYI 225 >gi|29726715|pdb|1NMY|A Chain A, Crystal Structure Of Human Thymidylate Kinase With Fltmp And Appnhp Length = 209 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 1 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 60 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 116 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 165 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 166 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIATATEKPLGELW 208 >gi|320169555|gb|EFW46454.1| deoxythymidylate kinase [Capsaspora owczarzaki ATCC 30864] Length = 210 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 21/215 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 + G I FEG + +GK+T +L L+ V R P TP + L Sbjct: 6 LARGALIVFEGCDRSGKSTQCLMLVERLKALGKRVQHLRFPDRSTPTGQKINAYL--ANA 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + +F+ R + V +++ AL G L+ DR+ S A+ + L L+ Sbjct: 64 SEMQDDKIHQLFSENRWEAVPSMLE-ALKNGTTLVVDRYAFSGVAFSSAKG----LDLEW 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ PD I LD+P++ +KR + +E + EK + Sbjct: 119 CKKPDAGLPAPDAVIYLDIPIEAAMKR--------GDFGNERYETR--AFQEKVAAQYKK 168 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + P ++D+ + +I NI +++ Sbjct: 169 L--QTPS-WMMMDARLPIDQLQADIFNIASKVIAD 200 >gi|27261100|dbj|BAC45213.1| putative thymidylate kinase [Oryza sativa Japonica Group] Length = 213 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 86/223 (38%), Gaps = 25/223 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GK++ + L FLQ K R P GT + L E Sbjct: 10 RGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYL--ANESE 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + ++ L+ G L+ DR+ S A+ + L ++ + Sbjct: 68 LDDRTIHLLFSANRWE-KRALMERKLLGGTTLIVDRYSYSGVAFSAAKG----LDIEWCK 122 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + LD+ + +R + +E+ + +K + + + Sbjct: 123 APENGLIAPDLVVYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVGEHYHSLR 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI----VWELVQKRVSPLS 220 + +VD + + V + + + E K+++ L+ Sbjct: 173 DS---TWKVVDGSLPMEVVEEQLKELAMSCILECQSKQLASLA 212 >gi|154148244|ref|YP_001406485.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381] gi|166221733|sp|A7I1U4|KTHY_CAMHC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|153804253|gb|ABS51260.1| thymidylate kinase [Campylobacter hominis ATCC BAA-381] Length = 195 Score = 137 bits (347), Expect = 7e-31, Method: Composition-based stats. Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 14/207 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I FEGI+G GK+T I LLK + + +T+EPGGT E R +LL + Sbjct: 1 MLIFFEGIDGVGKSTQIELLKSVYNK---NYLITKEPGGTLLGEKLREILLESDF-KISK 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123 AE +F A R +H E V++ + K ++CDR S AY + + L +L +I Sbjct: 57 TAELFLFLADRAEHFEKVLK--FSDKKDIICDRSFVSGIAYALANEQNLDINDLINLNKI 114 Query: 124 SVQEVMPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ I L + D R++NR + D E + + K ++ +I + Sbjct: 115 ALGGKIPNAKFIFLKISKDNLRFRLENRGNF------DKIEERGLEYLMKVQKNMSEIFK 168 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ + I V Sbjct: 169 ILKIDALEIDANGDINEIHKKIKEFVK 195 >gi|42544174|ref|NP_036277.2| thymidylate kinase isoform 1 [Homo sapiens] gi|114584335|ref|XP_001161768.1| PREDICTED: deoxythymidylate kinase (thymidylate kinase) isoform 3 [Pan troglodytes] gi|56405325|sp|P23919|KTHY_HUMAN RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|12804775|gb|AAH01827.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens] gi|49456983|emb|CAG46812.1| DTYMK [Homo sapiens] gi|62822371|gb|AAY14920.1| unknown [Homo sapiens] gi|119591690|gb|EAW71284.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_b [Homo sapiens] gi|187955102|gb|AAI47007.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens] gi|187955947|gb|AAI47011.1| Deoxythymidylate kinase (thymidylate kinase) [Homo sapiens] Length = 212 Score = 137 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211 >gi|291544985|emb|CBL18094.1| thymidylate kinase [Ruminococcus sp. 18P13] Length = 234 Score = 137 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 87/225 (38%), Gaps = 19/225 (8%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--- 56 M+ G I +G++G GK+T LL + +++ V P + A + L+ Sbjct: 1 MHKPGKLIVLDGLDGCGKSTQFQLLSQRMEQAGIPVLPISFPDYDHPSSALVKLYLNGEI 60 Query: 57 -CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113 + A A + +A R + +G +L R++ S+ +Q + Sbjct: 61 SPHAGDVNAYAASSFYAVDRYASYKRCWEQPYQQGTTILASRYVTSNAIHQMSKLPRQEW 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +L+ L ++ PD + LD+PV K + +RY E+ D E DV Sbjct: 121 DDYLEWLSAYEYDKLELPRPDLVLFLDMPVSAAQKLLCDRYGGDETKK-DIHES-DVAYM 178 Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWE 210 E+ R + Q ++ D+ + + + + +V E Sbjct: 179 ERCRDA--ALYAAQQQGWQVIPCSRDAQPLTVEEIGDRVWKVVCE 221 >gi|315585861|gb|ADU40242.1| thymidylate kinase [Helicobacter pylori 35A] Length = 191 Score = 137 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKNRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLMIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKIKTHAYTL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I + Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188 >gi|33303857|gb|AAQ02442.1| deoxythymidylate kinase [synthetic construct] gi|54696972|gb|AAV38858.1| deoxythymidylate kinase (thymidylate kinase) [synthetic construct] Length = 213 Score = 137 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211 >gi|60831889|gb|AAX36988.1| deoxythymidylate kinase [synthetic construct] Length = 213 Score = 137 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211 >gi|308183576|ref|YP_003927703.1| thymidylate kinase [Helicobacter pylori PeCan4] gi|308065761|gb|ADO07653.1| thymidylate kinase [Helicobacter pylori PeCan4] Length = 191 Score = 137 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EG++G GK+T + LLK + + VT+EPGGT E+ R + L+ + Sbjct: 1 MYVALEGVDGVGKSTQVGLLKDRFK----NALVTKEPGGTKIGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E ++++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKRLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+PD I+L + + +R+ + LD E + +Q A Sbjct: 107 TQSVLPDKIILLLIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + I + Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188 >gi|195121060|ref|XP_002005039.1| GI19275 [Drosophila mojavensis] gi|193910107|gb|EDW08974.1| GI19275 [Drosophila mojavensis] Length = 211 Score = 137 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 18/212 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G FI FEG + GK+T + L L+ K P T + L + Sbjct: 5 KRGAFIVFEGCDRVGKSTQSNQLCERLKEKGIAAKKINFPNRSTIIGDVINRFLKN--TQ 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E ++F+A R + + + I+ L+ G ++CDR+ S Y + L LD Sbjct: 63 ELSHEVIHLLFSANRWECMSS-IQADLLAGTTIICDRYAYSGVVYSVAKG----LDLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD L D R S + +E+ + + K +F Sbjct: 118 WAPDLGLLKPDAVFYLKANPDQLASR--------GSFGNERYEK--LELQRKVSDLFDHF 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + H D+ + Q + + I I L+ Sbjct: 168 NEKESSYWHQFDAFETEQELHSKISTIAENLL 199 >gi|281209668|gb|EFA83836.1| thymidylate kinase [Polysphondylium pallidum PN500] Length = 219 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 42/214 (19%), Positives = 81/214 (37%), Gaps = 19/214 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G+FI FEG + GK+T + L L R P T + L Sbjct: 13 MKRGIFILFEGADRVGKSTQVQSLFGHLSTTLGLPTKQLRFPDRTTQTGTIINSYLQNST 72 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A ++F+A R + + +++ L EG L+ DR+ S AY + + D Sbjct: 73 -QLDDRALHLLFSANRWESKDTLLKH-LNEGNSLVVDRYSYSGVAYSAAKG----IDFDW 126 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD L + + KR + +E+ V +K ++++ Sbjct: 127 CFGCEKGLPAPDLIFYLKMDTEDATKR--------GDYGNERYEK--VDFQKKIKEVYE- 175 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ +++++ + V+ I IV ++ Sbjct: 176 -SKLVNSSWNVINANRPIEEVSKEINEIVDRSIK 208 >gi|66804303|ref|XP_635930.1| thymidylate kinase [Dictyostelium discoideum AX4] gi|74851984|sp|Q54GN2|KTHY_DICDI RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|60464271|gb|EAL62422.1| thymidylate kinase [Dictyostelium discoideum AX4] Length = 222 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 81/216 (37%), Gaps = 21/216 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58 + GLFI FEG++ GK+T + L + + R P TP + L Sbjct: 16 IKRGLFILFEGVDRVGKSTQVQSLTNHISNVQKLPTKSLRFPDRTTPIGQIINQYL--QN 73 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 A ++F++ R + + I L G ++ DR+ S AY + + D Sbjct: 74 ATNMDDRALHLLFSSNRWE-ARDSILELLNNGTNIVVDRYSYSGVAYSAAKG----IDFD 128 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD L + + KR + +E+ + +K +QI+ Sbjct: 129 WCYACEKGLPKPDLIFYLSMSSEDATKR--------GEYGGERYEK--LEFQKKIKQIYE 178 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + D+ I+++ S ++ I +I +K Sbjct: 179 E--KLVDDQWKIINANRSIDEISNEISSIFDSEFKK 212 >gi|206603547|gb|EDZ40027.1| Thymidylate kinase [Leptospirillum sp. Group II '5-way CG'] Length = 229 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 25/232 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62 G I+ EG +G+GKTT LLK F + + V + AE R + + Sbjct: 9 GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVL----SPCNTAELIRGAISKLKERNTL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++AA +D E+VI PAL GK+++ ++++ + +A R Q D +++ Sbjct: 65 DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------RKDVMI---H 170 + + P T LD+ + L R+Q + R+ DY+E RK Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYEAGMDLNLANRKKDSFVIYQ 178 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 ++ +I+ ++A D VD+ Q + + ++++ R S+ Sbjct: 179 KRLIEIYREMA--LSDGFETVDAMKPIQLQQLELRQSISQILRNRSRRKGSR 228 >gi|304438544|ref|ZP_07398483.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368382|gb|EFM22068.1| thymidylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 231 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 76/227 (33%), Gaps = 19/227 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 M G E +G+GK T LL + L R+ + V P A + L Sbjct: 1 MARGKLFIIEAGDGSGKETQTRLLTQRLIREGHRVRAVAFPDYAADASMPVRMYLRGDFG 60 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 DE A + FA R R G I+L DR+ S+ +Q + + Sbjct: 61 TQADEVNPYAASTFFAVDRYASYRMKWREDYAAGTIILADRYTTSNMVHQAVKIGDAAER 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FLD L + + +PD LD+ +R+ + + D ER D Sbjct: 121 DAFLDWLYDFEFNKLGLPVPDAVFFLDMEP-CAAERLIAARAQVKGETPDIHER-DADYL 178 Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212 + ++ +A + D + + + V + + Sbjct: 179 RRTHDAYVLLAARCG--WVRIPSSADGTPLPIEEIHERLYAEVGKFL 223 >gi|109948201|ref|YP_665429.1| thymidylate kinase [Helicobacter acinonychis str. Sheeba] gi|123173187|sp|Q17V96|KTHY_HELAH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|109715422|emb|CAK00430.1| tmk [Helicobacter acinonychis str. Sheeba] Length = 191 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+G GK+T I LLK Q + T+EPGGT E RH+ L + Sbjct: 1 MYVVLEGIDGVGKSTQIELLKSAFQ----NALFTKEPGGTKIGETLRHIALH---ENLSE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q ++P I+L + + +R+ + LD E + V +Q F A Sbjct: 107 TQSILPAKIILLWIDKEGLKERLSLK-------SLDKIENQGVEKLLHIQQKFKTHAYAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +++ + +++ I + Sbjct: 160 KEQFGCEVLELNAKENAKNLHERISAFIQ 188 >gi|317182679|dbj|BAJ60463.1| thymidylate kinase [Helicobacter pylori F57] Length = 191 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKGRFKS----ALFTKEPGGTRMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSAFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLMIDKEGLKQRLSLK-------SLDKIENQGTERLLTIQQKIKAHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I + Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188 >gi|21233354|ref|NP_639271.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770317|ref|YP_245079.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. 8004] gi|188993513|ref|YP_001905523.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. B100] gi|23821764|sp|Q8P3Y6|KTHY_XANCP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|81303736|sp|Q4UPG4|KTHY_XANC8 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621847|sp|B0RXV1|KTHY_XANCB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|21115188|gb|AAM43153.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575649|gb|AAY51059.1| thymidylate kinase [Xanthomonas campestris pv. campestris str. 8004] gi|167735273|emb|CAP53487.1| unnamed protein product [Xanthomonas campestris pv. campestris] Length = 227 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 60/233 (25%), Positives = 96/233 (41%), Gaps = 39/233 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L++ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARSLATLLEQAGARVVLSKEPTNGPWGTQLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ E + R +HVE +I PAL G+I++ DR+ S AYQG L + + Sbjct: 65 SAQDEVDLLLRDRREHVEALIAPALARGEIVILDRYFPSMVAYQGAAGLPLDALLAA-ND 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDLLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R IF + P + H++D++ SV +V + R+ ++ D Sbjct: 163 RCRAIFAAL--QLPGK-HVIDASADADSVLRQAHAVVVAALADRLRVGATHTD 212 >gi|269123831|ref|YP_003306408.1| thymidylate kinase [Streptobacillus moniliformis DSM 12112] gi|268315157|gb|ACZ01531.1| thymidylate kinase [Streptobacillus moniliformis DSM 12112] Length = 223 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 84/222 (37%), Gaps = 13/222 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T L L +V P A + LS Sbjct: 2 GKLIIIEGTDGSGKQTQTQKLYNRLVNNGINVKKISFPNYNSDASVLVKMYLSGKFGSKP 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116 + A + + R + + +++ DR+ S+ + G + + + Sbjct: 62 TDVNAYTASTFYGIDRYASYKLEWEIEYLSDYVIISDRYTGSNMIHHGSKIDDEIEKEKY 121 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L+ L+++ + PD TI L++P++ ++NR + +D +K Sbjct: 122 LNWLEDLEFNKFELPRPDLTIFLNVPIEYTFNLMKNRDNKFTGDSKKDIHERDEEYLKKS 181 Query: 174 RQIFLDIARNQPDRCH--IVDSA-HSFQSVATNILNIVWELV 212 L+IAR + + +VD+ S + I + V EL+ Sbjct: 182 YYNALNIAREKNWKIINCVVDNNMLSIDDIHELIYDEVKELL 223 >gi|297669947|ref|XP_002813145.1| PREDICTED: thymidylate kinase-like isoform 1 [Pongo abelii] Length = 212 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYENR--AFQERALWCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 R+ +VD++ S ++V +I +++ +K + L Sbjct: 169 RDTTLNWKMVDASKSIEAVHEDIRMLSEDVICTATEKPLGELW 211 >gi|85057354|ref|YP_456270.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|84789459|gb|ABC65191.1| thymidylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 210 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 85/187 (45%), Gaps = 7/187 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I +++ LQ++ +V R G + + R L+ + Sbjct: 2 KLIIFEGLDGSGKTSLIKSVQQELQKQGNEVVAIRGLGSSTIGNSIRETFLT--HNTLHN 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + + E I+P L KI+L R+L S++AY+ + +S Sbjct: 60 LTRYFLSFANMIQNQEESIKPHLQTNKIILVKRWLGSNFAYRVYPSKIDKNY-HIFNNLS 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + P+ TI L + +GL+R N+ + LD E + ++ + + + +NQ Sbjct: 119 KKFIKPNITIYLKIHPQLGLERKINQKNH----QLDVIETSSLTYFQQVEKGYFEFLKNQ 174 Query: 185 PDRCHIV 191 I+ Sbjct: 175 NLGTKII 181 >gi|291514468|emb|CBK63678.1| thymidylate kinase [Alistipes shahii WAL 8301] Length = 228 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 56/233 (24%), Positives = 99/233 (42%), Gaps = 27/233 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60 +FI EG++GAGK+T I +L++ L + + VH R AR + GV+ Sbjct: 1 MFIVLEGLDGAGKSTQIRMLRQLLAERGVESEYVHFPRFDAPVYGELIARFLRGEFGGVN 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114 E A++FA R IR + EGK ++ DR++ S+ +Q GER Sbjct: 61 EVDPYLVALLFAGDRA-AAGPQIRAWIAEGKAVVLDRYVYSNVGFQCAKLPAGERRDRLA 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-----RKD-VM 168 ++ L+ PD ++ LD+P + +RE DY + +D + Sbjct: 120 QWILDLEFGYNDLPRPDLSLFLDVPFAFTE---RKLTEVREGDDRDYLQGSRDIHEDALD 176 Query: 169 IHEKRRQIFLDIARNQPDRCHIVD------SAHSFQSVATNILNIVWELVQKR 215 + + R+++L A D +VD + S + I ++ ++ R Sbjct: 177 LQRRVREVYLAAAAKD-DSLRVVDCSDPSGAMGSPEHNFEKIRAVLAPILDAR 228 >gi|124516693|gb|EAY58201.1| Thymidylate kinase [Leptospirillum rubarum] Length = 229 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 25/225 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62 G I+ EG +G+GKTT LLK F + + V + AE R + + Sbjct: 9 GTLIAIEGTDGSGKTTQSELLKHFFESRGQGVVL----SPCNTAELIRGAISKLKERNTL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++AA +D E+VI PAL GK+++ ++++ + +A R Q D +++ Sbjct: 65 DPVTFCFLYAADFVDRFEHVIIPALASGKVVIAEQYVYTVFARAMIRGIEQ----DWIRK 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------RKDVMI---H 170 + + P T LD+ + L R+Q + R+ DY+E RK Sbjct: 121 MFDFALTPARTFYLDVRFEDLLNRIQ--WKSRDERYFDYYEAGMDLNLANRKKDSFVIYQ 178 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +I+ ++A D VD+ Q + + ++++ R Sbjct: 179 KRLIEIYREMA--LSDGFETVDAMKPIQLQQLELRQSISQILRNR 221 >gi|254779984|ref|YP_003058091.1| thymidylate kinase [Helicobacter pylori B38] gi|254001897|emb|CAX30150.1| Thymidylate kinase (dTMP kinase) [Helicobacter pylori B38] Length = 191 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVELLKNRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSEFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q ++P+ ++L + + GLK R SL+ LD E + + I +K + + Sbjct: 107 TQSILPEKIVLLVID-EEGLK---QRLSLK---SLDKIENQGTEKLLTIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S +++ I + Sbjct: 160 REKFGCEVLELDAKESVKNLHEQITAFIE 188 >gi|297380671|gb|ADI35558.1| thymidylate kinase [Helicobacter pylori v225d] Length = 191 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + VT+EPGGT E RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALVTKEPGGTRMGEHLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q V+P+ I+L + + +R+ + LD E + +Q A Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +D+ S + I+ + Sbjct: 160 KEKFGCEVLELDAQKSVWDLHRQIVAFIE 188 >gi|226529697|ref|NP_001150303.1| LOC100283933 [Zea mays] gi|195638226|gb|ACG38581.1| thymidylate kinase [Zea mays] Length = 255 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 86/219 (39%), Gaps = 20/219 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + EG++ +GKT+ + L FL+ K Y+ P + L+ + Sbjct: 52 RGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWSFPDRATSVGQMISSYLA-NDSQL 110 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + ++ L+ G L+ DR+ S A+ + L ++ + Sbjct: 111 DDRTIHLLFSANRWE-KRALMESKLLSGTTLIVDRYSYSGVAFSAAKG----LDIEWCKA 165 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ + +R + +E+ + +K + + + Sbjct: 166 PENGLIAPDLVIYLDVQPEKAAER--------GGYGDERYEK--IEFQKKVAEHYHSLCD 215 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLS 220 + +VD ++V + ++ +Q + +PL+ Sbjct: 216 S---TWKVVDGFLPMETVEERLRDLATSCIQDCQGNPLT 251 >gi|307202789|gb|EFN82074.1| Thymidylate kinase [Harpegnathos saltator] Length = 209 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 20/214 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG + AGK+T + LL L ++ + P TP L Sbjct: 4 KRGALIVLEGCDRAGKSTQVKLLTNALNERSIPTKASAFPNRNTPIGGLLNGFL--SKEI 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA ++F+A R + + I L+ G L+ DR+ S AY L+ Sbjct: 62 NIPPEAAHLLFSANRWE-CKEDIEKMLLSGTTLVIDRYASSGTAYTAANTG---RCLNWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + PDC ++L + +++ LR + + FE+ D+ + + + Sbjct: 118 KQPDLGLPKPDCVMLLKVS--------KHQQELRNNWGEERFEQNDL--QVRVSANYEKL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + D VD+ + ++ IL ++Q+ Sbjct: 168 ---KDDTWMTVDADQNVLTIHGEILKKALSVIQE 198 >gi|50288903|ref|XP_446881.1| hypothetical protein [Candida glabrata CBS 138] gi|49526190|emb|CAG59814.1| unnamed protein product [Candida glabrata] Length = 218 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 14/215 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ GKTT + L L+ V + P + L+ + Sbjct: 5 RGKLILIEGLDRTGKTTQVDALAERLRGCGLKVVAAKFPNRESEIGQLINRYLTNRDFQL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +A ++F+A R +++E + + L +G ++ DR++ S AY + + + L + Sbjct: 65 PDQAVHLLFSANRWEYIEEL-KQQLNDGYCVVLDRYVFSGVAYSAAK-GTPGMDLQWCLQ 122 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-- 180 + PD T+ L + + + NR E + +E D K +Q F + Sbjct: 123 PDKGLLKPDLTLFL---TNEDRESIANRAGFGE----ERYE--DSDFQLKVKQKFHEAFH 173 Query: 181 ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQK 214 A Q V+ + + V+ I +++ L+ + Sbjct: 174 AYCQEGELRTVNVTGKGIEQVSAEIWDVIEPLLHE 208 >gi|317010152|gb|ADU80732.1| thymidylate kinase [Helicobacter pylori India7] Length = 191 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKIGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q ++P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSILPEKIILLVIDKESLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +++ S +++ I + Sbjct: 160 REKFGCEVLELNAKESVKNLHEQITAFIK 188 >gi|196015603|ref|XP_002117658.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens] gi|190579827|gb|EDV19916.1| hypothetical protein TRIADDRAFT_32784 [Trichoplax adhaerens] Length = 211 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 82/214 (38%), Gaps = 20/214 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 N G I EG + GK+T +L L + + P TP + A L Sbjct: 6 NRGALIIIEGGDRTGKSTQSKMLVDALLADGKQAELVKFPDRTTPIGKLAGSYL--QKTL 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A ++F+A R + V ++I L G L+ DR+ S AY + ++ Sbjct: 64 DLEDHAIHLIFSANRWEKVPSIIE-RLENGITLVVDRYAFSGVAYTSAKRGFD---IEWC 119 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ PD I L LPVD R + + +E ++ + F + Sbjct: 120 KQSDTGIPAPDLVIYLTLPVDQATSR--------DQYGTERYEST--QFQKRAVENFEKL 169 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +D++ S ++ + ++ E++Q+ Sbjct: 170 MTKN---WTTLDASQSIDAIHQQMKDLTTEIMQQ 200 >gi|299745593|ref|XP_001831821.2| thymidylate kinase [Coprinopsis cinerea okayama7#130] gi|298406658|gb|EAU90004.2| thymidylate kinase [Coprinopsis cinerea okayama7#130] Length = 237 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 46/212 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG++ +GKTT +LL+ L+ + + + P T L + Sbjct: 11 FIVIEGLDRSGKTTQTALLQSRLESELGASTKLMKFPDRTTTIGQMIDSYLKSDSE-LDD 69 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---------QGERDSSQHL 115 ++F+A R + + + I L EG ++LCDR+ S A+ G +S L Sbjct: 70 HVIHLLFSANRWE-LASTIERLLNEGTVVLCDRYAFSGIAFSASKVVPERSGSGESVPKL 128 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + + PD + LD+ + +R Sbjct: 129 PFEWCRAPDIGLPAPDLVLFLDIAPEQAKQRG---------------------------- 160 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + +R ++D+ +SVA ++ N Sbjct: 161 GYGE------ERWRVIDAGRDVESVAADLWNA 186 >gi|197294444|ref|YP_001798985.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853771|emb|CAM11700.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 209 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 7/178 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKTT I +K LQ +N +V + G + R + L+ + Sbjct: 2 KIIIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLT--HENLDN 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + ++ + + E I P + KI+L DR+L S++AY+ ++ + + Sbjct: 60 QTRLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY-QIFYNLF 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ L +IG+ R + + + + LD E + +K Q + + + Sbjct: 119 NRFIKPDMTVYLKTNPEIGINRKRTQSNHK----LDVIESSPISYFKKVEQGYDEFLK 172 >gi|208435342|ref|YP_002267008.1| thymidylate kinase [Helicobacter pylori G27] gi|238057700|sp|B5Z993|KTHY_HELPG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|208433271|gb|ACI28142.1| thymidylate kinase [Helicobacter pylori G27] Length = 191 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVELLKTRFK----NALFTKEPGGTRMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180 Q ++P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSILPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQQKIKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S +++ I + Sbjct: 160 KEKFGCEVLELDAKESAKNLHEKIAAFIE 188 >gi|126338564|ref|XP_001362301.1| PREDICTED: similar to Chain A, Wild Type Human Thymidylate Kinase Complexed With Aztmp And Adp [Monodelphis domestica] Length = 212 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 81/213 (38%), Gaps = 17/213 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ AGKTT L L + + + R P T + L Sbjct: 4 RRGALIVLEGMDRAGKTTQGRKLVAALLQSGHPAELLRFPERSTEIGKLLGSYL--EKKK 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++F+A R + V +I+ L G L+ DR+ S A+ + ++ LD Sbjct: 62 NMEDHTVHLLFSANRWEQVP-LIKEKLSRGVTLVVDRYAFSGVAFTSAK---ENFSLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L KR + +E + EK Q F + Sbjct: 118 KQPDVGLPKPDVILFLQLSSVEAAKR--------GDFGNERYE--NNTFQEKALQRFYQL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ +D++ + + + I ++ E +Q Sbjct: 168 MKDDSLNWKTIDASKNIEDLHKEIYSLSEETIQ 200 >gi|291522522|emb|CBK80815.1| thymidylate kinase [Coprococcus catus GD/7] Length = 223 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 79/219 (36%), Gaps = 21/219 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV---DE 61 FI EG +G+GK T LL + K D P + A L+ D+ Sbjct: 2 KFIVIEGNDGSGKATQSQLLLETMLEKGIDARKLSFPNYQSDSSALVKGYLAGRYGKRDD 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDS 119 A A +AA R+ + +GK+++ DR+ S+ YQ + FL Sbjct: 62 ISPYAAASFYAADRIASYMEDWKRDYEKGKLIIADRYTTSNAIYQCARLPRMRRRRFLQW 121 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L E + PD I LD+ DI ++ ++ R ++ +D + + Sbjct: 122 LYEYEYDLLGLPEPDMVIYLDVDPDISMQLIEQRGEKKD------IHEEDAEYMRQVHEA 175 Query: 177 FLDIARNQPDRCHIVDSAH-----SFQSVATNILNIVWE 210 AR ++ + + I++ + + Sbjct: 176 SKFCARK--GGWERINCCKDGKILPPERIHEMIMDAILD 212 >gi|330836556|ref|YP_004411197.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374] gi|329748459|gb|AEC01815.1| Thymidylate kinase [Spirochaeta coccoides DSM 17374] Length = 215 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++G+G TT + +L V T EP G P R L V A Sbjct: 10 IVLEGLDGSGTTTQSERICHWLDELEVPVIPTCEPTGGPIGRLIRSFLRKEAVT--TPLA 67 Query: 67 EAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++AA R DH+ N + K +++ DR+ SS AYQ + + + Sbjct: 68 IAGLYAADRDDHLHNPQTGLALHHKDSLIISDRYFYSSLAYQSVQ--VPFETVSMMNRY- 124 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQIFLDIARN 183 P I +D PV+I L R++ R + +E +Y E + +E+ F ++ Sbjct: 125 ---PHPRYLIYIDTPVEICLARMKKRGAAQELFEYKEYLE-EVTSFYER---AFSELPEE 177 Query: 184 QPDRCHIVDSAHSFQSVATNILN 206 + VD + + + +I Sbjct: 178 --VKFLRVDGSMEIEDIFLHIKE 198 >gi|131840166|ref|YP_001096175.1| ORF140 [Cyprinid herpesvirus 3] gi|71068047|gb|AAZ23013.1| thymidylate kinase [Cyprinid herpesvirus 3] gi|84181500|gb|ABC55103.1| hypothetical protein [Cyprinid herpesvirus 3] gi|109706741|gb|ABG42967.1| ORF140 [Cyprinid herpesvirus 3] gi|129560659|dbj|BAF48954.1| deoxythymidylate kinase [Cyprinid herpesvirus 3] Length = 233 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 80/207 (38%), Gaps = 17/207 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ +GK+T +L + L + + R P TP + LL+ Sbjct: 19 RRGALIILEGVDRSGKSTQCRMLVKALLEMGVEAELMRFPDRTTPIGQMINSYLLNKS-- 76 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F+A R + ++ + LM+G ++ DR+ S A+ + L+ Sbjct: 77 DLDDHVVHLLFSANRWEAASDL-KRKLMKGTTIVLDRYAFSGVAFTAAK---PGFELEWC 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD + L + + R + +E R+ F + Sbjct: 133 KRTDVGLPKPDLVVFLAIEA--------SAVESRGGFGDERYE--VSAFQAAVRENFEVL 182 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 ++ VD+A + + V +IL + Sbjct: 183 MKDVTVNWRKVDAARTPEQVHGDILRL 209 >gi|154496578|ref|ZP_02035274.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC 29799] gi|150274211|gb|EDN01302.1| hypothetical protein BACCAP_00870 [Bacteroides capillosus ATCC 29799] Length = 224 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 84/219 (38%), Gaps = 15/219 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58 SG I FEG +G+GK+T + L L+++ D P + A + L+ Sbjct: 2 SGKLIVFEGTDGSGKSTQFAKLCERLEQEGTDFRRLIFPQYKEPSSALLRMYLNGEFGTH 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--F 116 D+ A + +A R + G ++L DR+ S+ +Q + F Sbjct: 62 PDDVNPYAASTFYAVDRYAAWKKDWGSYYQNGGLVLSDRYTTSNAVHQTCKLPEAEWENF 121 Query: 117 LDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L + ++ PD I LD+P D ++ ++ R + D E D K Sbjct: 122 IRWLFDFECGKLGLPAPDLVIYLDMPTDKAVEMLRAREKATHTKG-DIHE-VDTEYLAKC 179 Query: 174 RQIFLDIARNQP-DRCHIVDSA---HSFQSVATNILNIV 208 R+ L A R VD S + + I +I+ Sbjct: 180 RRTALAAAGLLGWRRVSCVDGTGAVRSIEDIHREIWDII 218 >gi|197294394|ref|YP_001798935.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853721|emb|CAM11639.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 209 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 7/178 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKTT I +K LQ +N +V + G + R + L+ + Sbjct: 2 KIIIFEGLDGSGKTTFIQNIKEELQAQNQEVITLQGLGSSSIGPQIRKMFLT--HENLDN 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + ++ + + E I P + KI+L DR+L S++AY+ ++ + + Sbjct: 60 QTRLLLSFSNMIQTQEEQITPHIFSNKIILIDRWLGSNFAYRIYPSQNKRDY-QIFYNLF 118 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T+ L +IG+ R + + + + LD E + +K Q + + + Sbjct: 119 NRFIKPDMTVYLKTNPEIGINRKRTQSNHK----LDVIESSPISYFKKVEQGYDEFLK 172 >gi|317181157|dbj|BAJ58943.1| thymidylate kinase [Helicobacter pylori F32] Length = 191 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGENLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPKKIILLLIDKEGLKQRLSLKN-------LDKIENQGTEKLLTIQQKIKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I + Sbjct: 160 KEKFGCEVLELDAQKSVGDLHRQIAAFIE 188 >gi|269118666|ref|YP_003306843.1| thymidylate kinase [Sebaldella termitidis ATCC 33386] gi|268612544|gb|ACZ06912.1| thymidylate kinase [Sebaldella termitidis ATCC 33386] Length = 227 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 17/222 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG +G+GK T +LL + L+ +N+++ P A + LS V Sbjct: 2 GKLIIIEGSDGSGKETQTNLLYKKLKERNFNIKKISFPNYESPASEPLKMYLSGEFGKDV 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 ++ + A + FA R + I+L DR+ S+ +Q + + + +F Sbjct: 62 NDVNSFAASTFFAVDRYASYKQDWEKFYNNSGIVLSDRYTTSNMVHQASKIENEEDKQIF 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I LD+ ++ K + +R + + + Sbjct: 122 LKWLIDLEWNKLGLPTPDIVIFLDVSPELSQKLMSDRKNKITGEEKKDIHETNSEYLKNS 181 Query: 174 RQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWE 210 L++A+ IV D + + + +I+ + E Sbjct: 182 YYNALNLAKQYG--WTIVSCETDGVLKNIEEINEDIIKKLSE 221 >gi|296817147|ref|XP_002848910.1| thymidylate kinase [Arthroderma otae CBS 113480] gi|238839363|gb|EEQ29025.1| thymidylate kinase [Arthroderma otae CBS 113480] Length = 233 Score = 135 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 87/212 (41%), Gaps = 14/212 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G + EG++ AGK+T + L +FL + + V R P T + L G + Sbjct: 9 RRGALVVVEGLDRAGKSTQCATLYQFLINQGHKVKYIRFPDRTTSIGQMIDKYL-RGEIQ 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + IR + G ++ DR+ S Y +++ + LD Sbjct: 68 LDDHAVHLLFSANRWEAAAQ-IRQDIEGGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L++ + KR + +E V + +K ++F+ ++ Sbjct: 126 RPEIGLPRPDIWFFLNISTESAAKR--------GGYGTERYE--TVNLQKKVGKLFISLS 175 Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELV 212 + + +VD+ + ++ + + V + + Sbjct: 176 GLKGNEDMRVVDAGREIEEISRELQSEVLQTI 207 >gi|327301613|ref|XP_003235499.1| thymidylate kinase [Trichophyton rubrum CBS 118892] gi|326462851|gb|EGD88304.1| thymidylate kinase [Trichophyton rubrum CBS 118892] Length = 235 Score = 135 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 85/214 (39%), Gaps = 14/214 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G + EG++ AGK+T + L +FL + + R P T + + L G + Sbjct: 11 RRGALVVVEGLDRAGKSTQCARLHQFLVDQGHKTKYIRFPDRTTSIGKMINQYL-RGEIQ 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A +VF+A R + I+ + G ++ DR+ S Y +++ + LD Sbjct: 70 LDDHAVHLVFSANRWEAAAQ-IQRDIESGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD L++ ++ R + +E V + +K ++FL + Sbjct: 128 RPEVGLPRPDIWFFLNVSTEVAAAR--------GGYGTERYE--TVNLQKKVGKLFLSLT 177 Query: 182 RNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + IVD+ ++ I V + + K Sbjct: 178 GLKGNEDMRIVDAGREVDEISHEIREEVLQTMAK 211 >gi|254585257|ref|XP_002498196.1| ZYRO0G04554p [Zygosaccharomyces rouxii] gi|238941090|emb|CAR29263.1| ZYRO0G04554p [Zygosaccharomyces rouxii] Length = 218 Score = 135 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 86/222 (38%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I EG++ GK+T S+L L+ + + + P T + L+ Sbjct: 1 MARGLLILVEGLDRTGKSTQASILLDKLK---PNAELVKFPDRTTPIGQLINRYLTDESF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++F+A R + + ++ L+ GK ++ DR++ S AY + + D Sbjct: 58 QLPDQSIHLLFSANRWE-LSQSLQNTLLSGKHVIMDRYVYSGIAYSLAK-GIDGMDFDWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD L R + RE + +E + EK R F + Sbjct: 116 IQPDKGLIKPDLLFFL-------SNRDSLDTASREGFGQERYE--SLAFQEKVRDQFYRV 166 Query: 181 ARN--------QPDRCHIVD-SAHSFQSVATNILNIVWELVQ 213 +R +++ + S V+ I IV +Q Sbjct: 167 LERLENYSQGTDSNRLQMINVTNQSIDQVSITIWEIVNRKLQ 208 >gi|261840150|gb|ACX99915.1| thymidylate kinase [Helicobacter pylori 52] Length = 191 Score = 135 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALEEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S +++ I + Sbjct: 160 REKFGCEVLELDAQKSAKNLHEKITAFIK 188 >gi|272761174|gb|ACZ95827.1| thymidylate kinase [Jujube witches'-broom phytoplasma] Length = 212 Score = 135 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 92/211 (43%), Gaps = 16/211 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I L+ L+ + + G + + R + L+ + Sbjct: 2 KLIVFEGLDGSGKTSLIHALQPQLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLDSLQ 121 + A +I P L ++++ DR+L S+YAYQ ++ Q L L + Sbjct: 57 ITRFYLSLANMSQIQAELIVPQLKNNQLIILDRWLPSTYAYQLFPFSKEKKQLLPLKKIF 116 Query: 122 EISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +I+ + + PD I LD+ IG R +N+ + + D ER+ + + RQ + Sbjct: 117 KINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQR----DLIERQSLTYFQNVRQGYDH 172 Query: 180 IARNQPDRC--HIVDSAHSFQSVATNILNIV 208 + I++ + S +S I+ + Sbjct: 173 YITHYTSGVNKLILNGSDSIKSNVKQIIKQI 203 >gi|219886119|gb|ACL53434.1| unknown [Zea mays] Length = 255 Score = 135 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 87/219 (39%), Gaps = 20/219 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + EG++ +GKT+ + L FL+ K Y+ R P + L+ + Sbjct: 52 RGALVVLEGLDRSGKTSQCARLLSFLKGKGYNAEGWRFPDRATSVGQMISSYLA-NDSQL 110 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R + ++ L+ G L+ DR+ S A+ + L ++ + Sbjct: 111 DDRTIHLLFSANRWE-KRALMESKLLSGTTLIVDRYSYSGVAFSAAKG----LDIEWCKA 165 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I LD+ + +R + +E+ + +K + + + Sbjct: 166 PENGLIAPDLVIYLDVQPEKAAER--------GGYGGERYEK--IEFQKKVAEHYHSLRD 215 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK-RVSPLS 220 + +VD ++V + ++ +Q + +PL+ Sbjct: 216 S---TWKVVDGFLPMETVEEKLRDLATSCIQDCQGNPLT 251 >gi|291900|gb|AAA21719.1| thymidylate kinase [Homo sapiens] Length = 212 Score = 135 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 89/224 (39%), Gaps = 21/224 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ AGK+T L L + + R P T + L Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLKKKSDV 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 64 E--DHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + L L + KR + + +E + E+ + F + Sbjct: 118 KQPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V + + + +K + L Sbjct: 168 MKDTTLNWKMVDASKSIEAVHEELRVLSEDAIRTATEKPLGELW 211 >gi|224437631|ref|ZP_03658584.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818] gi|313144083|ref|ZP_07806276.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818] gi|313129114|gb|EFR46731.1| thymidylate kinase [Helicobacter cinaedi CCUG 18818] Length = 201 Score = 135 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 95/210 (45%), Gaps = 19/210 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--- 61 +++ EG++ GK+T + LLK+ + T+EPGG+ E+ R ++L + Sbjct: 1 MYVVIEGVDTCGKSTQLELLKKHFPQ----AVFTKEPGGSVIGESLRDLILFAPQRQGFV 56 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE ++F A R H + V++P + ++++ DR L SS AY D + + L Sbjct: 57 LDEYAEFMLFLADRAQHYKEVLKPH--KNRLVISDRSLISSIAYAKHIDMDKAIM---LN 111 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ ++ ++P +IL L R++++ + D E + + + + + Sbjct: 112 KLVLRGILPQLVVILKLEKSALQARLESKKN-------DSIESRGIEYMLEIQGRMCEAT 164 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + ++++ + + I+ + + Sbjct: 165 KMLNLPYIEINASLDREVICQEIVGEIKRV 194 >gi|289644563|ref|ZP_06476634.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] gi|289505631|gb|EFD26659.1| thymidylate kinase [Frankia symbiont of Datisca glomerata] Length = 210 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 9/151 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G F++ +G G GK+T + L L + V T+EP +P R G D Sbjct: 1 MNRGFFVAIDGPSGIGKSTVTAALAGQLAGQGLPVLATKEPTASPLGSLTRF-----GTD 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ A A + AA R H+E IRPAL G +++CDR++ SS Q + L Sbjct: 56 DYQGLALACLVAADRYQHLETEIRPALASGTVVVCDRYVASSLVLQR----LDGVPPKFL 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ Q PD T+IL +R R Sbjct: 112 WALAEQADRPDLTVILTGDPIRSRERAARRG 142 >gi|329766083|ref|ZP_08257642.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137354|gb|EGG41631.1| thymidylate kinase [Candidatus Nitrosoarchaeum limnia SFB1] Length = 193 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 84/209 (40%), Gaps = 19/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFG 63 + I EG + AGK T +LL + L+++ P TP + L G +F Sbjct: 1 MIIVIEGGDQAGKKTQTALLAKALKQRKIKTTTFSFPDYKTPIGKEISKYL--NGKRKFP 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + AA R + + ++I A + +++ +R+ S+ Y ++ L+ + Sbjct: 59 PQVIHCLLAANRWEKLNDIIN-AQSKNSVIIMNRYYQSNLIYGLANGMNR----KWLENL 113 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 D I+LD+ +R + D FE+ + +I+ IA+ Sbjct: 114 DSGLPKADLVILLDVSQTESFRRKKTNR--------DKFEK-NEEFLRNISKIYRKIAKQ 164 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 + I+D++ Q V +IL + + Sbjct: 165 --ENWKIIDASRPKQEVHKDILQAFTKKI 191 >gi|272761198|gb|ACZ95828.1| thymidylate kinase [Jujube witches'-broom phytoplasma] Length = 212 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 16/211 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I L+ L+ + + G + + R + L+ E+ Sbjct: 2 KLIVFEGLDGSGKTSLIHALQPQLKT---PHQLYQGLGSSSLGKEIRDLFLNFQQVEY-- 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLDSLQ 121 + A +I P L ++++ DR+L S+YAYQ ++ Q L L + Sbjct: 57 ITRFYLSLANMSQIQAELIIPQLKNNQLIILDRWLPSTYAYQLFPFSKEKQQLLSLKQIF 116 Query: 122 EISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +I+ + + PD I LD+ IG R +N+ + + D ER+ + + RQ + Sbjct: 117 KINHETILKKPDLLIYLDIDPLIGRTRKKNQKNHQR----DLIERQSLTYFQNVRQGYDH 172 Query: 180 IARNQPDRC--HIVDSAHSFQSVATNILNIV 208 + I++ + S +S I+ + Sbjct: 173 YITHYTSGVNKLILNGSDSIKSNVKQIIKQI 203 >gi|251771464|gb|EES52041.1| thymidylate kinase [Leptospirillum ferrodiazotrophum] Length = 226 Score = 135 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 94/222 (42%), Gaps = 25/222 (11%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEF 62 GL I+ EG +G+GKTT LLK + + V V E R + + Sbjct: 9 GLLIAIEGTDGSGKTTQAELLKHYYLSRGVAVVV----SACNTVELIRKAISDLKQQNYL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++AA +D E+ I PAL G++++ ++++ + ++ R + D + Sbjct: 65 DPVTFSFLYAADFVDRFEHQIIPALESGQLVIAEQYVYTVFSRAILRGIAP----DWISN 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------RKDVMI---H 170 I ++P T LDLPV+ L+R+ + R+ DY+E RK Sbjct: 121 IFDFALVPAKTFYLDLPVETLLERLH--WKTRQERFFDYYESGMDMNLSGRKKDSFVIYQ 178 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +++ ++A+ +D+ + + + + L+ Sbjct: 179 RRLIEMYRELAKTHH--MDTIDATAPIHRQQSTLRSRIDALL 218 >gi|85091013|ref|XP_958694.1| thymidylate kinase [Neurospora crassa OR74A] gi|12718338|emb|CAC28573.1| related to thymidylate kinase [Neurospora crassa] gi|28920075|gb|EAA29458.1| thymidylate kinase [Neurospora crassa OR74A] Length = 309 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 15/176 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GKTT + LL+ + V R P TP + L S + Sbjct: 23 RGALIVIEGLDRSGKTTQVKLLEDRFLKAGKKVKTMRFPDRTTPIGQMIDSYLKSQA--Q 80 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V+ I L +G L+ DR+ S Y + + L L + Sbjct: 81 MDDHVIHLLFSANRWEAVKK-ITSELSQGTTLILDRYYHSGIVYSAAKQN-PSLSLSWAR 138 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + PD + LDL + LR + +E+ + + R++F Sbjct: 139 APEIGLPRPDLVLFLDLDEEQA--------RLRGGWGHELYEK--AEMQRRVRELF 184 Score = 35.0 bits (80), Expect = 6.9, Method: Composition-based stats. Identities = 8/31 (25%), Positives = 17/31 (54%) Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R + + H++D++ S + VA + +V V Sbjct: 263 RQEEEDLHVIDASASVEEVAEELWKVVSARV 293 >gi|307638129|gb|ADN80579.1| Thymidylate kinase [Helicobacter pylori 908] gi|325996729|gb|ADZ52134.1| Thymidylate kinase [Helicobacter pylori 2018] gi|325998323|gb|ADZ50531.1| Thymidylate kinase [Helicobacter pylori 2017] Length = 191 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ R++ L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVELLKTRFK----NALFTKEPGGTRMGESLRYIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSEFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q ++P ++L + + GLK R SL+ LD E + +Q A Sbjct: 107 TQSILPTKIVLLVID-EEGLK---QRLSLK---SLDKIENQGAEKLLTIQQKLKTHAYAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +++ S +++ I + Sbjct: 160 KEKFGCEVLELNAKESVKNLHEQITAFIK 188 >gi|116200466|ref|XP_001226045.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51] gi|88175492|gb|EAQ82960.1| hypothetical protein CHGG_10778 [Chaetomium globosum CBS 148.51] Length = 317 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 49/244 (20%), Positives = 86/244 (35%), Gaps = 36/244 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G + EG++ +GKTT + LL++ V V R P TP + L S E Sbjct: 64 RGALVVLEGLDRSGKTTQVKLLEQRFVELGRKVKVMRFPDRTTPIGQMIDSYLKSQ--VE 121 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + I L + +LCDR+ S Y + + L L + Sbjct: 122 MDDHVIHLLFSANRWE-AAKTITHLLTQSTTVLCDRYYHSGIVYSSAKQN-PSLTLPWAR 179 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR------VQNRYSLRESACLDYF------------- 162 + PD + LDL + R R ++ + Sbjct: 180 GPEIGLPRPDLVLFLDLDENQARARGGWGGEAYERAEMQRRGGSRRWWWGGLVNGGGGSG 239 Query: 163 --------ERKDVMIHEKRRQ----IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 R+++ + R + + H+VD++ S + VA I +V Sbjct: 240 GGSGGNGGPREEIAVGAPTAAQPLTGVEYRFRQEEEDLHVVDASSSAEEVAEEIWKVVKA 299 Query: 211 LVQK 214 V++ Sbjct: 300 RVEE 303 >gi|317013243|gb|ADU83851.1| thymidylate kinase [Helicobacter pylori Lithuania75] Length = 191 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVELLKNRFK----NALFTKEPGGTKMGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +++ S +++ I + Sbjct: 160 QEQFGCEVLELNAKESVKNLHEKITAFIK 188 >gi|332022461|gb|EGI62769.1| Thymidylate kinase [Acromyrmex echinatior] Length = 208 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 73/213 (34%), Gaps = 18/213 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + AGK+T + +L L P + LS ++ Sbjct: 3 KRGALIVLEGCDRAGKSTQVKMLMNALNDLRIPAKARAFPNRKTPVGTILNSFLSKEIN- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA ++F+A R + + + L G L+ DR+ S Y L Q Sbjct: 62 MPPEAAHLLFSANRWE-CKEDMEKTLRSGTTLVIDRYAASGTVYTAANTG---RSLSWCQ 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PDC + L + + + LR + FE ++ + + Sbjct: 118 QADLGLPKPDCVVFLKVS--------KQQQELRGDWGKERFEH--DEFQQRVNANYEKLR 167 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D I+++ +V IL ++Q Sbjct: 168 D---DTWVIINADQDESAVHAEILQKTLSVIQD 197 >gi|296488737|gb|DAA30850.1| thymidylate kinase [Bos taurus] Length = 212 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 82/212 (38%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + + R P + L + Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R +HV +++ L +G L+ DR+ S A+ + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEHVP-LMKEKLSQGVTLVVDRYAFSGVAFTSAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + R + +E ++ Q F + Sbjct: 119 QPDVGLPKPDLVVFLQLQLAEAAAR--------GEFGRERYESGP--FQQRALQRFQQLL 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +V+++ S + V I + + ++ Sbjct: 169 ADPSLPWKMVNASRSIEDVHREIRALSEDAIR 200 >gi|320012975|gb|ADW07824.1| thymidylate kinase [Streptomyces flavogriseus ATCC 33331] Length = 217 Score = 134 bits (339), Expect = 6e-30, Method: Composition-based stats. Identities = 55/230 (23%), Positives = 87/230 (37%), Gaps = 25/230 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+FI+ +G G GK+T I L + L + VH T EP + R Sbjct: 4 KRGMFITIDGPSGVGKSTTIRALHQELTARGIPVHRTAEPTTSDLGRFIRA-----HFSH 58 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A A + AA R +HV IRP L G ++ DR+L S+ Q + L L Sbjct: 59 IRGHALACLVAADRYEHVAQEIRPRLSAGDTVISDRYLASTLVMQQ----LDGVPLKFLL 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ +MPD +IL + R+ R + F R++ L A Sbjct: 115 DLNANVLMPDLAVILTAAPALIADRISAR------GPRNRFHLDPTAPG---REVLLYKA 165 Query: 182 RNQ-----PDRCHIVD-SAHSFQSVATNILNIVW-ELVQKRVSPLSSKKD 224 Q + +V+ + VA I + + + SP S+ Sbjct: 166 AAQTLMTTHVKVLVVNTGGATPSEVAATITDAIPCSSIASAASPQSTPPQ 215 >gi|15646083|ref|NP_208265.1| thymidylate kinase [Helicobacter pylori 26695] gi|6016459|sp|O26009|KTHY_HELPY RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|2314650|gb|AAD08513.1| thymidylate kinase (tmk) [Helicobacter pylori 26695] Length = 191 Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVELLKDRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHTESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180 Q V+P I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPAKIILLLIDKEGLKQRLSLK-------SLDKIENQGIEKLLHIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S +++ I + Sbjct: 160 QEKFGCEVLELDAKESVKNLHEKIAAFIK 188 >gi|260943900|ref|XP_002616248.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720] gi|238849897|gb|EEQ39361.1| hypothetical protein CLUG_03489 [Clavispora lusitaniae ATCC 42720] Length = 208 Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 22/211 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GK+T L L + Y TP + L++ D Sbjct: 2 RGRLILIEGLDRSGKSTQAENLASALDAQLYK----FPDRSTPVGKLINEYLVNSSFD-L 56 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 EA ++F+A R + V + + L+ G+ ++ DR++ S AY + S + L Sbjct: 57 SDEAAHLLFSANRWE-VAHEMEATLLRGQNIVLDRYIYSGIAYSLAKSSLNDY--EWLYS 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD T+ L + ++ L R R+ + +E+ K +Q F+ I Sbjct: 114 PDKGLPKPDLTLFLTIDLEE-LSR-------RKGWGDERYEK--SAFQAKVKQCFMQILD 163 Query: 183 NQPDR---CHIVDSAHSFQSVATNILNIVWE 210 + D VD S + V ++ I+ E Sbjct: 164 PEKDSSVEIVNVD-NLSIEQVKAKLMEIIKE 193 >gi|134045602|ref|YP_001097088.1| thymidylate kinase [Methanococcus maripaludis C5] gi|166221754|sp|A4FXE4|KTHY_METM5 RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|132663227|gb|ABO34873.1| dTMP kinase [Methanococcus maripaludis C5] Length = 199 Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 52/229 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI FEGI+G GKTT L+ L K T EP ++ R +L Sbjct: 1 MNK--FIVFEGIDGCGKTTQAKLIAEKLNAK-----FTFEPTDGKIGKSIREIL---SGS 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E A++FAA R++HV N I L + ++ DR++ SS YQ F+ ++ Sbjct: 51 QCQKETLALLFAADRVEHVFN-IEEDLKK-SHVVSDRYVYSSIIYQ-ISQGISKDFIYTI 107 Query: 121 QEISVQEVMPDCTIILDLPV----------DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + + + LKR+++R + FE+ + I Sbjct: 108 NDYAK-------------TPDLVVLLDVDLNEALKRMESREK-------EIFEK--IEIQ 145 Query: 171 EKRRQIFLDIARNQPDR------CHIVD-SAHSFQSVATNILNIVWELV 212 +K ++ + ++ ++ + IV+ ++ S V ILN + + + Sbjct: 146 KKIKEGYYNLINSEDKKFMPKYGFIIVNTTSKSIHQVFDEILNAIIDKI 194 >gi|298246530|ref|ZP_06970336.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] gi|297554011|gb|EFH87876.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] Length = 262 Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 90/218 (41%), Gaps = 17/218 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG +G G+TT + LL+ +L+ Y V T A + + G Sbjct: 54 GRLIVIEGTDGVGRTTQLRLLRPWLESLGYAVADTEFTRSVLAGDGIKQA---KAGHTLG 110 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + +A +D +E+++ PAL G I+L DR++ + A R ++ H L+ I Sbjct: 111 PITMHLFYATDFVDRLESLVLPALRAGFIVLIDRYIYTLMARAMVRGANPH----WLRSI 166 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY-------SLRESACLDYFERKDVMIHEKRRQI 176 + P+ L++ +D + RV R + D +E + + Sbjct: 167 YSLALKPNAIFYLNIGIDDLIPRVLQRGGFNYWESGMDMRLGPDLYESF-ITYQARLLTQ 225 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 F + + P ++D+ +++ + + ++ L+ + Sbjct: 226 FEHMVK--PYEFQVIDAKQPVEAICAQLKSAIYPLLPQ 261 >gi|330916235|ref|XP_003297345.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1] gi|311330039|gb|EFQ94563.1| hypothetical protein PTT_07709 [Pyrenophora teres f. teres 0-1] Length = 155 Score = 134 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 58/146 (39%), Gaps = 3/146 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG++ AGK+T L LQ V R P T + LS + Sbjct: 1 MTRGKLIVFEGLDRAGKSTQCQKLVEDLQNDGMKVRHMRFPDRTTPIGQMINSYLSGDSE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F+A R + N I+ L G ++ DR+ S Y + L+ Sbjct: 61 Q-EDHVIHLLFSANRWE-AANSIQADLTAGTTIIIDRYYYSGCVYSAAKQKHDMS-LEWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR 146 + + PD I LD+ + KR Sbjct: 118 RNPELGLPRPDLCIFLDISAEDAAKR 143 >gi|224418120|ref|ZP_03656126.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491] gi|253827447|ref|ZP_04870332.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491] gi|313141655|ref|ZP_07803848.1| integral membrane protein [Helicobacter canadensis MIT 98-5491] gi|253510853|gb|EES89512.1| thymidylate kinase [Helicobacter canadensis MIT 98-5491] gi|313130686|gb|EFR48303.1| integral membrane protein [Helicobacter canadensis MIT 98-5491] Length = 194 Score = 134 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 17/204 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EGI+ +GK+T I LK F ++ T EPG T R +LL + + + Sbjct: 1 MYVAIEGIDTSGKSTQIQALKLFFKK----AIFTFEPGATNLGVRLREILLQDSI-QLDS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE ++F A R H +++ +++ DR L S AY + L + + Sbjct: 56 RAEMLLFLADRAQHANEILQSH--ANNLIIADRSLISGMAYAKDF---DFDTLKTFNLFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q ++P+ IIL+L D KR+ ++ + D E++ + ++ I + Sbjct: 111 TQGILPNKVIILELQKDDLQKRLNSKGN-------DKIEQRGLEYLLSLQERIKSITQKL 163 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 I+++ S+ I++ + Sbjct: 164 SLEHRIINANLPKDSITKQIVDFI 187 >gi|323446155|gb|EGB02432.1| hypothetical protein AURANDRAFT_35261 [Aureococcus anophagefferens] gi|323448063|gb|EGB03967.1| hypothetical protein AURANDRAFT_33306 [Aureococcus anophagefferens] Length = 214 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 17/199 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+F+ FEG++ +GK+T LL L+ K + R P + L ++ Sbjct: 8 KRGVFVVFEGVDRSGKSTQCKLLVEGLRAKGRSAELRRFPERSTGIGQLIDKYLKRELE- 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R D I AL G ++CDR+ S A+ + + LD + Sbjct: 67 LDDRAVHLLFSANRWDEAAK-IERALASGVDVVCDRYAFSGVAFSAAKPNID--DLDWCK 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD + L++P R + +E + + ++ Q F+D+ Sbjct: 124 APDAGLPKPDVVVFLEIPAAKAEAR--------GGFGDERYE--ESAMQKRVAQHFVDL- 172 Query: 182 RNQPDRCHIVDSAHSFQSV 200 P ++D+A + V Sbjct: 173 -RGPS-WRVLDAARTVDEV 189 >gi|15612432|ref|NP_224085.1| thymidylate kinase [Helicobacter pylori J99] gi|8134530|sp|Q9ZJE5|KTHY_HELPJ RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|4155994|gb|AAD06956.1| THYMIDYLATE KINASE [Helicobacter pylori J99] Length = 191 Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 97/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H+E+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHIESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLLINKENLKQRLSLK-------SLDKIENQGIEKLLTIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S +++ I + Sbjct: 160 QEKFGCEVLELDAQKSAKNLHEKIATFIE 188 >gi|305432214|ref|ZP_07401378.1| thymidylate kinase [Campylobacter coli JV20] gi|304444757|gb|EFM37406.1| thymidylate kinase [Campylobacter coli JV20] Length = 192 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 90/206 (43%), Gaps = 15/206 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEG++ GK+T ISLLK + + T EPGGT R +LL + Sbjct: 1 MYVVFEGVDCVGKSTQISLLKECFK----EAVFTAEPGGTKLGNHLRELLLYKPY-QLDK 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E ++F A R H E +++ + K+++ DR S AY + ++ L L + Sbjct: 56 KTELLLFLADRAQHCEEILKA--NQDKLIISDRSFISGMAYAKDF---ENEELFRLNAFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ P I L ++ +R+ Q E +DYF + + +K + Sbjct: 111 LENFFPQKVIFLKGDENLIKERLSQKEQDAIEKRGIDYF----LSVQDKLENTLYFLKEK 166 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW 209 + +++ + +++ I + + Sbjct: 167 INLQVLTLNANDTKENLHQKIKDFLQ 192 >gi|320582782|gb|EFW96999.1| Thymidylate and uridylate kinase [Pichia angusta DL-1] Length = 210 Score = 134 bits (338), Expect = 9e-30, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 82/215 (38%), Gaps = 17/215 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+ I+ EG++ GKTT S L L + D + + P T + L+ Sbjct: 1 MTRGVLIAIEGLDRTGKTTQTSRLLERLDKSGVDATLIKFPERTTPIGRIINTYLTDKAF 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ ++F+A R + + IR L +GK ++ DR++ S AY + L D Sbjct: 61 ELSDQSAHLLFSANRWE-LAEKIRNLLEDGKTVVLDRYVYSGVAYSSAKG----LPFDWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD + +K RE + +E ++ + F Sbjct: 116 LSPDLGLPKPDIVLF--------MKFKHEDNVTREGFGEERYE--VAEFQQRVKTQFEKF 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + VD S + V I +E+V +R Sbjct: 166 QNEDNWKTIYVD-NKSIEEVGELIWAE-YEVVARR 198 >gi|16975360|pdb|1E98|A Chain A, Wild Type Human Thymidylate Kinase Complexed With Aztmp And Adp Length = 215 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 87/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 7 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 66 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 122 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 171 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ ++V I + + +K + L Sbjct: 172 KDTTLNWKMVDASKRIEAVHEEIRVLSEDAIRTATEKPLGELW 214 >gi|307353971|ref|YP_003895022.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] gi|307157204|gb|ADN36584.1| thymidylate kinase [Methanoplanus petrolearius DSM 11571] Length = 210 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/222 (26%), Positives = 103/222 (46%), Gaps = 32/222 (14%) Query: 1 MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 MN+ GLFI+ +G G GK+T + L + L + ++ + TREP + + R Sbjct: 1 MNTSYGLFITLDGPNGVGKSTIMGDLCKKLTSQGFETYKTREPTDSLIGDFLRK-----S 55 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++ + A + A R H+E+ I PAL + KI+L DR+++SS Q + L+ Sbjct: 56 EEKYRGKTLACIAATDRYYHIEHEILPALQKKKIVLSDRYVESSLVLQR----IDDVDLE 111 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQ--------NRYSLRESACLDYFERKDVMIH 170 + EI+ ++PD ++IL D KR+ R LDY+ R+ Sbjct: 112 FIWEINKNVIIPDLSVILLASPDTLNKRLNLRSDGSFFERKKTARKDELDYY-RQAAEFL 170 Query: 171 EKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWEL 211 EK Q F +++D+ + S + + +I + +L Sbjct: 171 EK--QGF---------NVYVLDNESTSIEENSESITKRIVDL 201 >gi|317011608|gb|ADU85355.1| thymidylate kinase [Helicobacter pylori SouthAfrica7] Length = 191 Score = 133 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T I LLK Q + T+EPGGT E R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQIELLKGAFQ----NALFTKEPGGTKTGETLRRIALN---ENMSE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q ++P+ I+L + + GLK R SL+ LD E++ + I +K + + Sbjct: 107 TQSILPEKIILLLID-EEGLK---ERLSLK---SLDKIEKQGAEKLLQIQKKLKTHAYIL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +++ S +++ I+ + Sbjct: 160 KEQFGCEVLELNAKESVKNLHEKIMVFIE 188 >gi|325675694|ref|ZP_08155378.1| thymidylate kinase [Rhodococcus equi ATCC 33707] gi|325553665|gb|EGD23343.1| thymidylate kinase [Rhodococcus equi ATCC 33707] Length = 222 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G+ I+ EG++GAGK T + + L+ DV P G + A+ A L D Sbjct: 2 GMLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R + + R + +++ DR++ S+ AY R + F+ Sbjct: 62 SASVHAMAVMFALDRAGAADRL-RDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVG 120 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + + PD + LD+PV + +R + R + S LD +E+ D + + + Sbjct: 121 WIENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYEK-DSGLQARTGE 179 Query: 176 IFLDIARNQ 184 ++ ++A Sbjct: 180 VYRELAAAD 188 >gi|313157974|gb|EFR57380.1| dTMP kinase [Alistipes sp. HGB5] Length = 229 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 52/230 (22%), Positives = 92/230 (40%), Gaps = 27/230 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLS-CGVD 60 +FI EG++GAGK+T I +L++ + + VH R AR + GV Sbjct: 1 MFIVLEGLDGAGKSTQIRMLRQLFTDRGVESEYVHFPRFDSPVYGQLIARFLRGEFGGVQ 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFL 117 E A++FA R D IR L EGK ++ DR++ S+ +Q + + Sbjct: 61 EVDPYLVALIFAGDRADAAPQ-IRQWLAEGKAVVLDRYVYSNVGFQCAKLPAGEERDRLA 119 Query: 118 DSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVM 168 D + + PD ++ LD+P + +RE DY + + Sbjct: 120 DWIVNLEFGHNALPRPDLSLFLDVPFAFTE---RKLSEVREGDDRDYLQGGQDIHEASLQ 176 Query: 169 IHEKRRQIFLDIARNQPDRCHIVD------SAHSFQSVATNILNIVWELV 212 + + R ++L A P +VD + S + + I + ++ Sbjct: 177 LQQDVRSVYLASAAKDPS-LRVVDCSDASGAMESPEGIFAKIRAELIPIL 225 >gi|296425149|ref|XP_002842105.1| hypothetical protein [Tuber melanosporum Mel28] gi|295638364|emb|CAZ86296.1| unnamed protein product [Tuber melanosporum] Length = 214 Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 80/201 (39%), Gaps = 16/201 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+ EG++ AGK+T LL L +N + + P T + LS Sbjct: 8 TRGALIAIEGLDRAGKSTQCQLLMDRLAERNVPARLQKFPDRTTPIGKMINAYLSTSTT- 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + ++++ L +G ++ DR++ S + + L LD + Sbjct: 67 LEDHTIHLLFSANRWELSAHILK-LLNDGVTIVLDRYVYSGIVFSAAKG----LSLDYCR 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V D + LDL ++ R + +E + + + R +F ++ Sbjct: 122 APDVGLPRADVVLFLDLDAEVA--------RRRGGFGGERYEVE--AVQRRVRDLFKEVG 171 Query: 182 RNQPDRCHIVDSAHSFQSVAT 202 + R +VD+ S + V Sbjct: 172 EKEEGRWRVVDAGRSVEEVRE 192 >gi|295100620|emb|CBK98165.1| thymidylate kinase [Faecalibacterium prausnitzii L2-6] Length = 223 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 34/234 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M+ G + EG++G+GK T LL L V P + A + LS Sbjct: 1 MSKGRLLVIEGLDGSGKATQAKLLAAHLAEGGRRVMEITFPDYESDSSALVKMYLSGRFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D+ A + +A R + G I++ DR+ S+ +Q + Sbjct: 61 DKPDDVNPYAASSFYAVDRYASYKTRWGSFYEAGGIVIADRYTTSNAVHQCSK--LPPEQ 118 Query: 117 LDSLQEIS-------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 D + + PD + L + + K + RY ES + Sbjct: 119 WDDFLRWAFDYEYRLLGLPAPDAVVYLQVDPAVSQKLMTGRYHGDESRK---------DV 169 Query: 170 HEKRRQIFLDIARNQPDRCHI------VD-----SAHSFQSVATNILNIVWELV 212 HEK + +L +R + C + V + + + + + + + + Sbjct: 170 HEKDIE-YLARSRRAAEYCAVHLGWATVHCTENRAMRTIEEIQAEVRALAEKEL 222 >gi|289614663|emb|CBI58566.1| unnamed protein product [Sordaria macrospora] Length = 279 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 52/243 (21%), Positives = 86/243 (35%), Gaps = 36/243 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GKTT + LL+ +++ V R P TP + L S + Sbjct: 26 RGALIVVEGLDRSGKTTQVKLLEERFRKEGKRVKTMRFPDRTTPIGQMIDSYLKSQA--Q 83 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V+ I L G L+ DR+ S Y + + L L + Sbjct: 84 MEDHVIHLLFSANRWEAVKT-ITTELSLGTTLILDRYYYSGIVYSAAKQN-PSLSLSWAR 141 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL--- 178 + PD + LDL + R +L + +R+ L Sbjct: 142 APEIGLPRPDLVLFLDLDEEQARLRGGGTAALGGAGTGGGGSGGKGDGEVSKREAVLLSD 201 Query: 179 -----------------------DIARNQPDR-----CHIVDSAHSFQSVATNILNIVWE 210 IAR R H+VD++ S + VA + +V Sbjct: 202 EPAAQEEVAVGAPTPLAGSAGGQHIAREYAFRQEEEDLHVVDASASVEEVAEEVWRVVSA 261 Query: 211 LVQ 213 V+ Sbjct: 262 RVE 264 >gi|210135641|ref|YP_002302080.1| thymidylate kinase [Helicobacter pylori P12] gi|238057699|sp|B6JNX2|KTHY_HELP2 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|210133609|gb|ACJ08600.1| thymidylate kinase [Helicobacter pylori P12] Length = 191 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 97/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKNKFK----NALFTKEPGGTKIGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E K+++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKEKKLIISDRSLISGMAYSEFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--LDIAR 182 Q ++P ++L + + +R+ + LD E + + ++ A Sbjct: 107 TQSILPTKIVLLLIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQRNLKTHAYAL 159 Query: 183 NQPDRCHI--VDSAHSFQSVATNILNIVW 209 + C + +++ S +++ I + Sbjct: 160 REKFGCKVLELNAKESVKNLHEKIAAFIK 188 >gi|306821414|ref|ZP_07455019.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550536|gb|EFM38522.1| thymidylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 217 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 82/219 (37%), Gaps = 21/219 (9%) Query: 4 GLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G F E G + GK T +LL L++ N V P A + + L+ Sbjct: 2 GKFYVIESGSDACGKATQSNLLYTHLKKDN-KVLKVEFPNYKSATSSLVKMYLNGDFGKN 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHL 115 ++ + FAA R + I + I++ DR+ S+ YQ + ++ Sbjct: 61 PEDVNPYITSTFFAADRYATFKTEIEKYYNDDYIIIADRYTTSNMVYQAGKYDDIDEKNK 120 Query: 116 FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FLD L + PD LDLP +I K ++NR S+++ +D E EK Sbjct: 121 FLDWLYDFEFNLYELPKPDKVFFLDLPFEISYKLMKNR-SVKKGVDVDIHEN-SRDYLEK 178 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILN 206 + +A +D S + ILN Sbjct: 179 VYENAKFVAEKYG--WCHIDCQENGCLKSVDDIHQLILN 215 >gi|62898429|dbj|BAD97154.1| deoxythymidylate kinase (thymidylate kinase) variant [Homo sapiens] Length = 212 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 88/223 (39%), Gaps = 19/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG+ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVGRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 119 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 169 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 211 >gi|190345821|gb|EDK37769.2| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC 6260] Length = 215 Score = 133 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 81/214 (37%), Gaps = 21/214 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GKTT +L + + + + P + + L+ Sbjct: 2 RGHLILIEGLDRSGKTTQTQILHNAIPSSS----LIKFPDRSTNIGTIINQYLTDHNFSL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFLD 118 +A ++F+A R + + I L G ++ DR++ S AY + S + ++ Sbjct: 58 SDQAAHLLFSANRWELAAS-IEDQLQAGHTVIMDRYIYSGIAYSLAKSETSSSPEMASVE 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L PD TI L L + R +S + +E+ E ++ FL Sbjct: 117 WLYAPDRGLPKPDVTIFLTLDIAEMAAR--------KSWGEERYEQTK--FQEVVKRCFL 166 Query: 179 DIARNQPD-RCHIVDSAH-SFQSVATNILNIVWE 210 + D IVD VA+ I +V E Sbjct: 167 KVLDPHADPSVVIVDVNKLGIDEVASKIWTVVEE 200 >gi|320530090|ref|ZP_08031160.1| dTMP kinase [Selenomonas artemidis F0399] gi|320137523|gb|EFW29435.1| dTMP kinase [Selenomonas artemidis F0399] Length = 229 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 77/227 (33%), Gaps = 19/227 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 M G E +G+GK T LL L+R + + P + + L Sbjct: 1 MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113 D+ A A + FA R G ++L DR+ S+ +Q + D+ + Sbjct: 61 THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FLD L ++ + +PD LD+ + + R + A D ER D Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDMEPAAAQRLIAARTE-KNGAAPDIHER-DADYL 178 Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212 + ++ +A + D A + + V + Sbjct: 179 ARTHDAYVLLAARYG--WVRIPSSTDGAPLPIAEIHERLYREVQTYL 223 >gi|187777353|ref|ZP_02993826.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC 15579] gi|187774281|gb|EDU38083.1| hypothetical protein CLOSPO_00905 [Clostridium sporogenes ATCC 15579] Length = 235 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 88/232 (37%), Gaps = 27/232 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M G I EG +G+GK T L L ++N V P + A + LS Sbjct: 5 MKRGRLIVIEGSDGSGKATQTKKLYDKLVKQNKKVKKVEFPNYKSESSALIKMYLSGEFG 64 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D A + +A R + ++G I++ DR+ S+ +Q + + Sbjct: 65 KNPDSVNPYASSTFYAVDRFASYKKDWEEFYLKGGIIIADRYTTSNMIHQAAKIKEVQAK 124 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FL+ L + ++ +PDC I LD+P ++ R + E++ IH Sbjct: 125 DKFLNWLWDFEFEKFNLPVPDCVIFLDMPPKCSKSLMETRNNKFTG------EKEK-DIH 177 Query: 171 EKRRQIFLDIARN-----QPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 E + L+ N + + ++ S + +I+ ++ + + Sbjct: 178 ENNYEYLLESYNNSKYISEKYGWNRIECTNEDKIKSIDQINDDIIKVITKYI 229 >gi|194755687|ref|XP_001960115.1| GF13205 [Drosophila ananassae] gi|190621413|gb|EDV36937.1| GF13205 [Drosophila ananassae] Length = 211 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 16/214 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G I FEG + +GK+T L L+ + P + + L+ D Sbjct: 4 IKRGALIVFEGCDRSGKSTQSRRLAELLKSRGIPTESLNFPDRSTDIGQVINSYLTNSKD 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+ R + + + R L+ G L+ DR+ S AY + + D Sbjct: 64 -LQDEVIHLLFSVNRWELMGKL-RQKLLAGTTLIVDRYSYSGVAYSVAKG----MDFDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD L D R+ R E + +E+ V + ++ I Sbjct: 118 YAPERGLIKPDAVFYLRAVPD----RLAERSEFGE----ERYEK--VEFQSRVSAVYDRI 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 N+ H +D++ + + I I +L+ K Sbjct: 168 FSNESTYWHQLDASVTADELHFLIAEIAEKLLPK 201 >gi|86159732|ref|YP_466517.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776243|gb|ABC83080.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-C] Length = 561 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 85/211 (40%), Gaps = 9/211 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 + +SFEGI+G+GKT +L+ L+R +V RE G T AA R + + E Sbjct: 1 MLVSFEGIDGSGKTALSNLVCERLRRGGREVVHARERGVLATAAARRVRELTRDPRLLEL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + A +E V+RPAL G + + DR L S A +++ Sbjct: 61 SPRAELCLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQIFL 178 + PD +++D+ D L R++ R D + + R+ Sbjct: 121 AASGGTWPDLAVLVDVDPD--LARLRKRVGKILEGRADEPGSRKGLAGHGLQVRVREHLA 178 Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIV 208 A P V + + +++A + + + Sbjct: 179 AEAAAAPASWLRVANEGRALEALADEVADAI 209 >gi|163867844|ref|YP_001609048.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476] gi|161017495|emb|CAK01053.1| putative thymidylate kinase [Bartonella tribocorum CIP 105476] Length = 219 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 14/210 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G F+ G +G+GKTT + + R+ ++ + + T +P L G Sbjct: 18 AGSFVVLCGFDGSGKTTQVQEISRYWAQEKH-IIQTFQPSHWYRNNQEVRDYLESG-KSI 75 Query: 63 GAEAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A++ A R H +I P+L ++ DR++ SS AY R L L+S+ Sbjct: 76 DPLLLALLAATDRRKHTLEIIEPSLTSSQNFIISDRYVYSSLAYFYARG----LSLESVI 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ P T L LP ++R+Q R L +E + + EK +++ ++ Sbjct: 132 KLNQFIPRPCITFYLHLPPTAIIERLQKRDGLAL-----KYE-EKLSFIEKVYEVYQLLS 185 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +R ++D S S+ + + + Sbjct: 186 EID-ERFIVIDGTASISSIHNQVRYHIDKA 214 >gi|153956386|ref|YP_001397151.1| hypothetical protein CKL_3795 [Clostridium kluyveri DSM 555] gi|219856699|ref|YP_002473821.1| hypothetical protein CKR_3356 [Clostridium kluyveri NBRC 12016] gi|146349244|gb|EDK35780.1| Tmk [Clostridium kluyveri DSM 555] gi|219570423|dbj|BAH08407.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 228 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 46/237 (19%), Positives = 81/237 (34%), Gaps = 41/237 (17%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G I EG +G+GK T L L + Y+V P + A + L+ Sbjct: 5 KGKLIVIEGCDGSGKATQTRKLYNRLLDEKYNVKKVEYPNYNSESSALVKMYLNGDFGEN 64 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 ++ A + + R + + G I+L DR+ S+ +Q + + Sbjct: 65 PEDVSAYVASTFYGVDRFASYKTQWKKFYEGGGIVLSDRYTTSNMVHQASKIDNIEEKDK 124 Query: 116 FLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FL L + PDC I LD+P + + R + IHE Sbjct: 125 FLKWLWDFEFNIFKLPVPDCVIFLDMPPEYSKNLMIERNNKFTGNA-------KKDIHES 177 Query: 173 RRQIFL-----------------DIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +L I+ + DR + V+ + NI ++V ++ Sbjct: 178 NYE-YLINSYNNAVYVADKYGWNKISCIENDRINTVN------EIHKNIYSLVKYIL 227 >gi|328773773|gb|EGF83810.1| hypothetical protein BATDEDRAFT_8037 [Batrachochytrium dendrobatidis JAM81] Length = 181 Score = 132 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 72/182 (39%), Gaps = 16/182 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I EG + GKT+ S+L L ++V + P T L G E Sbjct: 11 SRGALIVVEGGDRCGKTSQCSVLVSHLCAAGFNVMAHKFPDRTLDTGVLIDQYL-RGTKE 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + + + I+ + +G ++ DR+ S AY + + L+ + Sbjct: 70 VDDHAIHLLFSANRWESMGH-IKSLIDQGITIVVDRYAFSGAAYTAAKG----IDLEWCK 124 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD + LDL I R + + +E + R+ F IA Sbjct: 125 RPDMGLLKPDLVLYLDLDPKIAAARAE--------YGSERYE--TIEFQAAVRRNFYQIA 174 Query: 182 RN 183 + Sbjct: 175 DD 176 >gi|298246531|ref|ZP_06970337.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] gi|297554012|gb|EFH87877.1| thymidylate kinase [Ktedonobacter racemifer DSM 44963] Length = 260 Score = 132 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 52/231 (22%), Positives = 96/231 (41%), Gaps = 22/231 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI EGI+G+GK+T I+LL+++L + Y V E +P + Sbjct: 13 LFIV-EGIDGSGKSTQIALLRQWLISQGYSVFF-SEWNSSPLVKQTTS--RGKKKQILTP 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +++ A D E+ I P L G I+L DR++ +++A ++ L + Sbjct: 69 TTFSLIHATDFADRTEHDIIPPLKAGAIVLADRYIYTAFARDAA-RGVNRTWVRELYRFA 127 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESAC-------LDYFERKDVMIHEKRRQI 176 VQ P +P+ + L+R+ N R L+ D +E + + Q Sbjct: 128 VQ---PTLAFYYRVPLSLSLRRIMNGRPQLKYYEAGMDLGLSTDPYESFKL-FQHRVVQE 183 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ--KRVS-PLSSKKD 224 + I ++D+ S Q ++ +V ++ +R+S PL + Sbjct: 184 YEAIVEEFE--LTVMDATLSIQEQQRHMRELVLPHLEGVRRISMPLPPLES 232 >gi|223938821|ref|ZP_03630709.1| thymidylate kinase [bacterium Ellin514] gi|223892519|gb|EEF58992.1| thymidylate kinase [bacterium Ellin514] Length = 250 Score = 132 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 95/223 (42%), Gaps = 22/223 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I EG +G+G++T I+ L +L+ H T + G + + + + + Sbjct: 40 AGKLIVVEGADGSGRSTQIARLVEWLEGCG---HATVQVGLKRSTLVSEELNQAQHGNIL 96 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ +A D +EN+I PAL G ++L DR++ + A +L +L Sbjct: 97 SHTTLSLFYATDFADQLENMILPALKAGFMVLADRYIYTLMARDLV-RGMDEAWLKNLYS 155 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQIFLD-- 179 I+ ++PD L++ + ++R + ++ LDY+E D+ + + FL Sbjct: 156 IA---LVPDAVFYLNVSPEQLVQR-----NFAKNHSLDYWESGMDLGLSREMFDSFLKYQ 207 Query: 180 -IARNQPDR------CHIVDSAHSFQSVATNILNIVWELVQKR 215 + N+ R +IVD + ++ + + R Sbjct: 208 GLMANEFRRLQSIYGFNIVDGNRLPDEINADLRRKIEANLAGR 250 >gi|317014888|gb|ADU82324.1| thymidylate kinase [Helicobacter pylori Gambia94/24] Length = 191 Score = 132 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVALEGVDGAGKSTQVELLKTRFK----NALFTKEPGGTRMGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H E+VI+PAL E ++++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYSAFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 Q ++P ++L + + +R+ + LD E + + +Q A Sbjct: 107 TQNILPTKIVLLLIDKEGLKQRLSLK-------SLDKIENQGIEKLLTIQQKLKTYAYAL 159 Query: 185 PDRC----HIVDSAHSFQSVATNILNIVW 209 ++ +D+ S +++ I + Sbjct: 160 QEKFGCEVLELDAKESVKNLHEKITAFIK 188 >gi|315638103|ref|ZP_07893288.1| thymidylate kinase [Campylobacter upsaliensis JV21] gi|315481951|gb|EFU72570.1| thymidylate kinase [Campylobacter upsaliensis JV21] Length = 193 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 25/212 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ GK+T I LLK + D T EPG T E R +LL+ + Sbjct: 1 MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEHLRELLLNRPY-PISS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R H E ++R E K+++ DR + S AY + L SL + + Sbjct: 56 KAELLLFLADRNQHYEEILRE--NEQKLIISDRSIISGMAY---AKNFDLDILFSLNDFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ------IFL 178 + P I L ++ +R+ + LD E++ + ++ FL Sbjct: 111 LNGFFPQKAIFLRGDENLLKERLMQKN-------LDDIEKRGIAYFMDVQEKMEKVLNFL 163 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +D+ S +++ I + + Sbjct: 164 KF--KIDLKILELDAKDSIENLHEKIKEFIND 193 >gi|302685608|ref|XP_003032484.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8] gi|300106178|gb|EFI97581.1| hypothetical protein SCHCODRAFT_233884 [Schizophyllum commune H4-8] Length = 282 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 49/275 (17%), Positives = 91/275 (33%), Gaps = 75/275 (27%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG++ +GK+T + LK L V + + P T A L ++ Sbjct: 3 TRGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNIE- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---------------- 105 ++++A R + + + I L EG ++CDR+ S A+ Sbjct: 62 MDDHVVHLLYSANRWE-LASRISTLLSEGTTIICDRYAFSGIAFSASKVASTSAAPTSAS 120 Query: 106 --------------------QGERDSSQHLFLDSLQEISVQEVMP--------------D 131 Q + S I+ ++P D Sbjct: 121 SISASTSSSSPAALPSTSTSQSSALAPTSSTPASATSIAQTPLLPYAWCRAPDIGLPAPD 180 Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-ARNQ---PDR 187 T+ D+ + R + +ER+DV + +++ + A + P Sbjct: 181 VTLFFDIAPEAARAR--------GGYGEERYEREDV--QRRVMEVYARLGAEMEAARPGS 230 Query: 188 CHI---------VDSAHSFQSVATNILNIVWELVQ 213 VD+A + + VA + +V LV+ Sbjct: 231 WVRVDAARAWEEVDAARAIEEVADAVWAVVGPLVK 265 >gi|108563864|ref|YP_628180.1| thymidylate kinase [Helicobacter pylori HPAG1] gi|123373654|sp|Q1CRB6|KTHY_HELPH RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|107837637|gb|ABF85506.1| thymidylate kinase [Helicobacter pylori HPAG1] Length = 191 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++G GK+T + LLK + + T+EPGGT E+ RH+ L+ + Sbjct: 1 MYVVLEGVDGVGKSTQVGLLKDRFK----NALFTKEPGGTKMGESLRHIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +H E+VI+PAL E ++++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHTESVIKPALKEKRLIISDRSLISGMAYSEFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPAKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAHAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S + I + Sbjct: 160 QEKFGCEVLELDAQKSVGDLHRQIAAFIE 188 >gi|149643009|ref|NP_001092363.1| thymidylate kinase [Bos taurus] gi|148743918|gb|AAI42259.1| DTYMK protein [Bos taurus] Length = 212 Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + + R P + L + Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVDALCAEGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R +HV +++ L +G L+ DR+ S A+ + ++ LD + Sbjct: 63 VEDHSVHLLFSANRWEHVP-LMKEKLSQGVTLVVDRYAFSGVAFTSAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + R + S ++ Q F + Sbjct: 119 QPDVGLPKPDLVVFLQLQLAEAAARGEFGRERYGSGP----------FQQRALQRFQQLL 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +V+++ S + V I + + ++ Sbjct: 169 ADPSLPWKMVNASRSIEDVHREIRALSEDAIR 200 >gi|255712129|ref|XP_002552347.1| KLTH0C02728p [Lachancea thermotolerans] gi|238933726|emb|CAR21909.1| KLTH0C02728p [Lachancea thermotolerans] Length = 214 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 85/221 (38%), Gaps = 24/221 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GK+T L L D + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKSTQAGKLTERL---GPDSQLIKFPDRSTKIGGLINQYLTDPSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +A ++F+A R + V I+ L+EG+ ++ DR++ S AY + + L Sbjct: 58 LLPDQAIHLLFSANRWE-VAEEIKALLLEGRNVVLDRYVYSGVAYSAAK-GVPGMDLRWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V + PD T+ L LR+ + +E + +K R+ F Sbjct: 116 LQSDVGLLKPDLTLFL----------TNQGSELRQGFGDERYE--NSAFQQKVREQFSTF 163 Query: 181 AR--NQPD----RCHIVDSA-HSFQSVATNILNIVWELVQK 214 PD +++++ S + V + + +Q+ Sbjct: 164 FNDFEDPDYSQAHIKVLETSGKSIEQVHDMVWSTTSAFMQE 204 >gi|197123784|ref|YP_002135735.1| thymidylate kinase [Anaeromyxobacter sp. K] gi|196173633|gb|ACG74606.1| thymidylate kinase [Anaeromyxobacter sp. K] Length = 567 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 9/215 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 + +SFEGI+G+GKT +L+ L+ +V RE G T AA R + + E Sbjct: 1 MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + A +E V+RPAL G + + DR L S A +++ Sbjct: 61 SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAVAGRGLPRAEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQIFL 178 + PD +++D+ D L R++ R D + + R+ Sbjct: 121 AASGGTWPDLAVLVDVDPD--LARLRKRVGKILEGRADEPGSRKGLAGHGLQVRIREHLA 178 Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIVWELV 212 A P+ V + S +++A + + V Sbjct: 179 AEAAGAPEAWLRVANEGRSLEALADLVAEAIAARV 213 >gi|124027289|ref|YP_001012609.1| thymidylate kinase [Hyperthermus butylicus DSM 5456] gi|123977983|gb|ABM80264.1| Thymidylate kinase [Hyperthermus butylicus DSM 5456] Length = 223 Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 49/221 (22%), Positives = 87/221 (39%), Gaps = 18/221 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +++ FEGI+GAG TTH LL L+ Y V + EP RH+L Sbjct: 1 MARPVYVVFEGIDGAGTTTHARLLAEKLRLLGYCVELVEEPSKDVVGGVIRHMLRHG--- 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + A++FAA RL ++ I++ DR SS AYQ + D + Sbjct: 58 PFHQDVLALLFAADRLLLQRSLEERLQGRSCIVVSDRSWISSLAYQTCELFPYAVDADWV 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ PD + +D+ I +R+ +R +RE + + R+ + + Sbjct: 118 YIVNKYAWRPDILVYIDVEPLIAFRRLASRGRVRELP-------ETLAALRALRESYRHV 170 Query: 181 ARNQPDRCHI---VDSAH-----SFQSVATNILNIVWELVQ 213 + + V+ + ++ I V ++ Sbjct: 171 IQRVSRVVPVVLWVEGSRNGVEKPIDKLSREIAVRVLAAIK 211 >gi|194246795|ref|YP_002004434.1| Thymidylate kinase [Candidatus Phytoplasma mali] gi|193807152|emb|CAP18590.1| Thymidylate kinase [Candidatus Phytoplasma mali] Length = 205 Score = 131 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 15/177 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 L I FEGI+G GKTT I+ L + L+ + N V + G T + R + L + Sbjct: 2 LLIVFEGIDGTGKTTLINNLAQTLKTIQPNSKVIIINGLGSTNIGTSIREMFLF--NPKM 59 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-RDSSQHLFLDSLQ 121 +E + A + +I+P L I+L DR+L S++AYQ H + L Sbjct: 60 ISETRYFLSFANLIQIQNELIKPHLKTNTIILMDRYLGSNFAYQAYPFQIDPHYSIFQL- 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 I + + P T+++DL I LKR + +D E + + ++ + + Sbjct: 119 -IQKKFLKPQITVLIDLEPKIALKR--------KGDLIDLIENQPLSYFQQVVKGYQ 166 >gi|317056618|ref|YP_004105085.1| thymidylate kinase [Ruminococcus albus 7] gi|315448887|gb|ADU22451.1| thymidylate kinase [Ruminococcus albus 7] Length = 218 Score = 131 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 86/219 (39%), Gaps = 18/219 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----D 60 I EG++G+GK+T L + + K+ + P + + L+ + + Sbjct: 4 KLIVLEGLDGSGKSTQFEKLSEYFKNKDVKLKAISFPDYEDPSSTLVKMYLNGEIAGSAE 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--LD 118 A A + +A+ R + +G ++L R++ S+ YQ + L Sbjct: 64 AVNAYAASSFYASDRYISYKKYWEKDYNDGCLILAARYVTSNCIYQMTKLPEDEWENYLA 123 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L++ + PD I LD+P++I + + RY ES D E+ ++ R+ Sbjct: 124 WLEDYEYCKLSLPKPDKVIFLDMPIEISQRLLSARYGGDESKK-DIHEK-NIEFLHMCRK 181 Query: 176 IFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVW 209 + + IV+ + S +++ + I+ Sbjct: 182 A--ALFTAEKQGWDIVECSCGNEPLSIEAIFNKLTEIIE 218 >gi|149246800|ref|XP_001527825.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239] gi|146447779|gb|EDK42167.1| thymidylate kinase [Lodderomyces elongisporus NRRL YB-4239] Length = 237 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 86/232 (37%), Gaps = 35/232 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAARHVL 54 M G I EG++ +GK+T SLL L + + P T + Sbjct: 1 MPRGQLILIEGLDRSGKSTQASLLVSKLGHASSSSSPPCSSKLLKFPDRTTPIGKLINEY 60 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 L+ + +A ++F A R + + I L +G ++ DR++ S AY +++ Sbjct: 61 LTNKEFQLDDQAAHLLFLANRWE-LNQEIHNLLNQGCFVVLDRYIYSGIAYTLAKNNLDD 119 Query: 115 LF----------------LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 +D L PD T+ L L ++ KR + Sbjct: 120 SEANTSISRGKKSSNLASVDWLLGPDKGLPKPDLTMFLTLDLEEISKR--------KGWG 171 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDR-CHIVD-SAHSFQSVATNILNIV 208 + +E + K ++ FL I + D+ I+D S + V + +++ Sbjct: 172 NERYELQ--QFQAKVKRCFLQILNSNQDKSIEILDVGEKSIEEVTNQLWDVI 221 >gi|311697051|gb|ADP99924.1| thymidylate kinase-like protein [marine bacterium HP15] Length = 139 Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats. Identities = 54/145 (37%), Positives = 80/145 (55%), Gaps = 7/145 (4%) Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISVQE 127 ++ +AAR DHV +VIRPAL G+ ++ DRF+DS+YA Q D+ HL S ++I V Sbjct: 1 MLVSAARFDHVRSVIRPALASGQWVISDRFIDSTYALQVAVSDADLHLLFRSTRDIVVGP 60 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 +PD TIILDLP+ + R R LD E R+ + +A +P+R Sbjct: 61 TLPDLTIILDLPLAVA----HGRREQRRDGVLDPAEAARD--FAVIREALIAVAHQEPER 114 Query: 188 CHIVDSAHSFQSVATNILNIVWELV 212 CH++D+ S VA +I +V L+ Sbjct: 115 CHVIDANQSPDGVARDIWRLVEPLL 139 >gi|289422838|ref|ZP_06424671.1| dTMP kinase [Peptostreptococcus anaerobius 653-L] gi|289156748|gb|EFD05380.1| dTMP kinase [Peptostreptococcus anaerobius 653-L] Length = 226 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 82/226 (36%), Gaps = 18/226 (7%) Query: 3 SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--- 58 +G E G +G+GK T L L Y V P + A + L+ Sbjct: 2 AGKLFVIESGTDGSGKATQTKKLFDRLVEDGYRVRKVEFPNYDSDSSALIKMYLNGDFGD 61 Query: 59 -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQH 114 D+ A + +AA R + + G I+L DR+ S+ +Q + + Sbjct: 62 KADDVDAYIASTFYAADRYASYKLGWEDFYLNGGIILADRYTTSNMVHQASKMDSTDDKE 121 Query: 115 LFLDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FLD L + PD LD+P+ + K +++R + S +D+ Sbjct: 122 KFLDWLDDFEYGLYKIPRPDGVFFLDVPLKVSAKLMEDRKNKFTSGDEKDIHERDLDYLA 181 Query: 172 KRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWELV 212 + +A + +D + S + + +I + V E + Sbjct: 182 RTYDNSKYVADKF--KWTQIDCTDGMAMRSVEDINEDIYSRVLESL 225 >gi|220918549|ref|YP_002493853.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1] gi|219956403|gb|ACL66787.1| thymidylate kinase [Anaeromyxobacter dehalogenans 2CP-1] Length = 567 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 50/215 (23%), Positives = 85/215 (39%), Gaps = 9/215 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 + +SFEGI+G+GKT +L+ L+ +V RE G T AA R + + E Sbjct: 1 MLVSFEGIDGSGKTALSNLVCERLRGAGREVVHARERGVLATAAARRVRELTRDPRLLEL 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE + A +E V+RPAL G + + DR L S A +++ Sbjct: 61 SPRAELFLNLAREAQQLEEVVRPALARGALCVADRSLHSILALAIAGRGLPRAEVEAAVR 120 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQIFL 178 + PD +++D+ D L R++ R D + + R+ Sbjct: 121 AASGGTWPDLAVLVDVDPD--LARLRKRVGKILEGRADEPGSRKGLAGHGLQVRIREHLA 178 Query: 179 DIARNQPDRCHIV-DSAHSFQSVATNILNIVWELV 212 A P+ V + S +++A + + V Sbjct: 179 AEAAAAPEAWLRVANEGRSLEALADLVAEAIAARV 213 >gi|301386509|ref|ZP_07234927.1| thymidylate kinase [Pseudomonas syringae pv. tomato Max13] gi|302062080|ref|ZP_07253621.1| thymidylate kinase [Pseudomonas syringae pv. tomato K40] gi|302134676|ref|ZP_07260666.1| thymidylate kinase [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 138 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 100 DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 D++YAYQG H + +L++ ++ PD T++ DLPV+IGL R R L Sbjct: 27 DATYAYQGGGRGLSHERIAALEQFVQGDLRPDLTLVFDLPVEIGLSRAAAR------GRL 80 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 D FE++ + R +L+ A+ +P R +VD+A S V ++ ++ EL++ Sbjct: 81 DRFEQEGRAFFDAVRSTYLNRAKAEPARYRLVDAAQSLADVQASLDKLLPELLE 134 >gi|84995356|ref|XP_952400.1| thymidylate kinase [Theileria annulata strain Ankara] gi|65302561|emb|CAI74668.1| thymidylate kinase, putative [Theileria annulata] Length = 214 Score = 130 bits (329), Expect = 9e-29, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 23/217 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I FEGI+ +GK+T I+LL + L +N V P TP + R L + + Sbjct: 8 RGKLIVFEGIDRSGKSTQINLLSQKLSEENIKNEVLSFPYKTTPTGKLLREYLRN-RDES 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--------SQ 113 +A ++F+A R + + +I+ L G ++ DR+ S AY + Q Sbjct: 67 IPKQALHLLFSANRWEVMNRIIK-LLKSGTHVITDRYAFSGIAYSVGAEVRLLFYQVFPQ 125 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L + V PD +DL + R + L++ E Sbjct: 126 GLDFNWCLIPDTGIVEPDVVFYMDLAPECSSAR--GNFGSEIYENLEHMEN--------V 175 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++F +I+ + + + I +I + Sbjct: 176 YEVFKRF--GNLSYWNIIKAHDDQKQIHHKIYSIAKK 210 >gi|111023286|ref|YP_706258.1| thymidylate kinase [Rhodococcus jostii RHA1] gi|110822816|gb|ABG98100.1| probable thymidylate kinase [Rhodococcus jostii RHA1] Length = 227 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G I+ EG++GAGK T + + L + V P G + A+ A L D Sbjct: 2 GKLIALEGLDGAGKRTLVGAVVGRLTEQGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R V + L E +++ DR++ S+ AY R + F+ Sbjct: 62 SDSVYAMAVMFALDRSGAVGELAE-LLAEHDLVILDRYVASNAAYGAARLHQGADGEFVG 120 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +Q + + PD + LD+PV + +R + R S S LD +ER D + E+ + Sbjct: 121 WVQNLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTGE 179 Query: 176 IFLDIARNQ 184 ++ ++A Sbjct: 180 VYRELAVKD 188 >gi|217031818|ref|ZP_03437321.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128] gi|298735556|ref|YP_003728077.1| dTMP kinase [Helicobacter pylori B8] gi|216946470|gb|EEC25072.1| hypothetical protein HPB128_199g26 [Helicobacter pylori B128] gi|298354741|emb|CBI65613.1| dTMP kinase [Helicobacter pylori B8] Length = 191 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 98/209 (46%), Gaps = 25/209 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVALEGVDGAGKSTQVGLLKTRFK----NALFTKEPGGTKIGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +F + R +HVE+VI+PAL E ++++ DR L S AY L ++ Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKEKRLIISDRSLISGMAYSQFSSLE-------LNLLA 106 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD----VMIHEKRRQIFLDI 180 Q V+P+ I+L + + +R+ + LD E + + I +K + + Sbjct: 107 TQSVLPEKIILLVIDKEGLKQRLSLK-------SLDKIENQGTEKLLTIQQKLKTHAYAL 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +++ S +++ I + Sbjct: 160 REKFGCEVLELNAKESVKNLHEKIAAFIE 188 >gi|322795260|gb|EFZ18065.1| hypothetical protein SINV_01400 [Solenopsis invicta] Length = 208 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 80/214 (37%), Gaps = 18/214 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI EG + AGK+T + +L L P + LS ++ Sbjct: 2 LKRGAFIVLEGCDRAGKSTQVKMLINALNDLQIPAKARGFPNRKTPVGTILNSFLSKEIN 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+A R + + + L+ G L+ DR+ S Y L+ Sbjct: 62 -VPPETAHLLFSANRWE-CKEDMEKTLLSGVSLVMDRYAASGAVYTAANTG---RSLNWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q+ + + PDC + L + + + LR + FE ++ + ++ Sbjct: 117 QQPDLGLLKPDCVMFLKVS--------KRQQELRSDWGKERFEH--DEFQQRVDANYEEL 166 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + D ++++ +V IL ++Q+ Sbjct: 167 ---KDDSWFVINADQDESTVHAEILQKTLSVIQE 197 >gi|238928063|ref|ZP_04659823.1| thymidylate kinase [Selenomonas flueggei ATCC 43531] gi|238884023|gb|EEQ47661.1| thymidylate kinase [Selenomonas flueggei ATCC 43531] Length = 231 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 77/227 (33%), Gaps = 19/227 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 M G E +G+GK T LL + L R+ + V P A + L Sbjct: 1 MARGKLFIIEAGDGSGKETQTRLLAQRLIREGHRVRAVAFPDYEADASMPVRMYLRGDFG 60 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113 DE A + FA R R G I+L DR+ S+ +Q + + + Sbjct: 61 MQADEVNPYAASTFFAVDRYASYRMKWRQDYEAGTIILADRYTTSNMVHQAVKIRDAAER 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FLD L + + +PD LD+ +R+ + + D ER D Sbjct: 121 DAFLDWLDDFEFNKLGLPVPDAVFFLDMEP-CAAERLLTARAQAKGETPDIHER-DADYL 178 Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212 + ++ + + D A + + + V + + Sbjct: 179 RRTHDAYVLLTARCG--WVRIPSSADGAPLPIEEIHERLYAEVGKFL 223 >gi|313896786|ref|ZP_07830334.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430] gi|312974703|gb|EFR40170.1| dTMP kinase [Selenomonas sp. oral taxon 137 str. F0430] Length = 229 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 76/227 (33%), Gaps = 19/227 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 M G E +G+GK T LL L+R + + P + + L Sbjct: 1 MAKGKLFIIEAGDGSGKETQTRLLAERLERDGHSILPITFPDYAADSSMLVRMYLRGDFG 60 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQ 113 D+ A A + FA R G ++L DR+ S+ +Q + D+ + Sbjct: 61 THADDVNAYAASTFFAVDRYASYRTKWGRDYETGAVILADRYTTSNMVHQAVKIQDDAER 120 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 FLD L ++ + +PD LD+ + + R A D ER D Sbjct: 121 DAFLDWLYDLEFRKMGLPVPDAVFFLDMEPAAAQRLIAVRAEN-SGAAPDIHER-DADYL 178 Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVATNILNIVWELV 212 + ++ +A + D A + + V + Sbjct: 179 ARTHDAYVLLAARYG--WVRIPSSTDGAPLPIAEIHERLYREVQTYL 223 >gi|57506107|ref|ZP_00372029.1| thymidylate kinase [Campylobacter upsaliensis RM3195] gi|57015591|gb|EAL52383.1| thymidylate kinase [Campylobacter upsaliensis RM3195] Length = 193 Score = 130 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 25/212 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EGI+ GK+T I LLK + D T EPG T E R +LL+ + Sbjct: 1 MYVVLEGIDCVGKSTQIELLKPIYK----DAIFTSEPGATKLGEYLRELLLNRPY-PISS 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +AE ++F A R H E ++R E K+++ DR + S AY + L +L + + Sbjct: 56 KAELLLFLADRNQHYEEILRE--NEQKLIISDRSIISGMAY---AKNFDLDILFTLNDFA 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ------IFL 178 + P I L + +R+ + LD E++ V ++ FL Sbjct: 111 LNGFFPQKAIFLRGDEILLKERMGQKN-------LDDIEKRGVAYFINVQEKMEKVLNFL 163 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + +D+ S +++ I + + Sbjct: 164 KF--KIDLKILELDAKDSVENLHEKIKEFIND 193 >gi|307692944|ref|ZP_07635181.1| putative thymidylate kinase [Ruminococcaceae bacterium D16] Length = 222 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 87/231 (37%), Gaps = 31/231 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----G 58 +G I FEG +G+GK+T L R + + + P + A + L+ Sbjct: 2 AGRLIVFEGTDGSGKSTQFQALCRRVTQSGREYQKLVFPQYNEPSSALIRMYLAGEFGTH 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--SQHLF 116 + A + +A R ++ V +G ++L DR+ S+ +Q + + + F Sbjct: 62 PQDVNPYAASAFYAVDRYASLKKVWGEYYEQGGLVLTDRYTTSNAVHQAVKCAPQEREAF 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L + + PD + LD+P + ++ ++ R + + IHE Sbjct: 122 LRWLDDFEHDKLGLPRPDLVLYLDMPTERAVELLRRREAATHTKA---------DIHE-L 171 Query: 174 RQIFLDIARNQP------DRCHIV---DSA---HSFQSVATNILNIVWELV 212 +L R+ ++ ++ S + + I ++ ++ Sbjct: 172 DTGYLAACRDSALQATQLLGWKVIPCVNAQGEVRSVEEIHEEIWSLAAPVL 222 >gi|312140676|ref|YP_004008012.1| dtmp kinase [Rhodococcus equi 103S] gi|311890015|emb|CBH49333.1| dTMP kinase [Rhodococcus equi 103S] Length = 220 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 10/188 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T + + L+ DV P G + A+ A L D Sbjct: 1 MLIALEGLDGAGKRTLVGKVVARLEADGLDVATLDFPRYGTSIHADLASEALKGAHGDLS 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 A A++FA R + + R + +++ DR++ S+ AY R + F+ Sbjct: 61 ASVHAMAVMFALDRAGAADRL-RDLVAAHDVVILDRYVASNAAYGAARMHEGGDGEFVGW 119 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ + + PD + LD+PV + +R + R + S LD +E+ D + + ++ Sbjct: 120 IENLEFDRLGLPRPDLQLYLDVPVALAEQRARAREAEDVSRTLDAYEK-DSGLQARTGEV 178 Query: 177 FLDIARNQ 184 + ++A Sbjct: 179 YRELAAAD 186 >gi|315636925|ref|ZP_07892149.1| thymidylate kinase [Arcobacter butzleri JV22] gi|315478755|gb|EFU69464.1| thymidylate kinase [Arcobacter butzleri JV22] Length = 189 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 46/204 (22%), Positives = 94/204 (46%), Gaps = 18/204 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++S EGI+ AGK+T +++L++ + T+EPGGT R + L G + + Sbjct: 1 MYVSIEGIDTAGKSTQLNILEKKFP----NAIFTKEPGGTALGIKLRAMAL--GGEAKSS 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI+P + +++ DR + S AY + + + L L I+ Sbjct: 55 IAEMFLFLADRAEHIEEVIKP--NKNSLVISDRSMVSGIAYANQFEIDK---LVELNLIA 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++P I+L+L + R+ + + D E + + + + + Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKAN-------DSIELRGIDYLINIQNRMKETIKKL 162 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 +D++ + +A I + + Sbjct: 163 NVNHIFIDASLKIEDIAKTIEDFL 186 >gi|157737212|ref|YP_001489895.1| thymidylate kinase [Arcobacter butzleri RM4018] gi|254808274|sp|A8ETF2|KTHY_ARCB4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|157699066|gb|ABV67226.1| thymidylate kinase [Arcobacter butzleri RM4018] Length = 189 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 45/204 (22%), Positives = 94/204 (46%), Gaps = 18/204 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++S EGI+ AGK+T +++L++ + T+EPGGT R + L G + + Sbjct: 1 MYVSIEGIDTAGKSTQLNILEKTFP----NAIFTKEPGGTALGIKLRAMAL--GGEAKSS 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE +F A R +H+E VI+P + +++ DR + S AY + + + + L I+ Sbjct: 55 IAEMFLFLADRAEHIEEVIKP--NKNSLVISDRSVVSGIAYANQFEIDKLIE---LNLIA 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++P I+L+L + R+ + + D E + + + + + Sbjct: 110 TSNILPTHIILLELTPEELKFRLSQKAN-------DSIELRGIDYLINIQNRMKETIKKL 162 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 +D++ + +A I + + Sbjct: 163 NVNHIFIDASLKIEDIAKTIEDFL 186 >gi|290462111|gb|ADD24103.1| Thymidylate kinase [Lepeophtheirus salmonis] Length = 214 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 82/226 (36%), Gaps = 27/226 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCG 58 + G FI EG + +GKTT L ++ + R P L G Sbjct: 6 LKRGAFIVLEGCDRSGKTTLAKRL-----SQDPNFEFLRFPDRDSKLTGSLINSFL--TG 58 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + ++F+A R + V I L GK ++CDR+ S AY + D Sbjct: 59 AKEMCGQLIHLLFSANRWEKVPQ-ILSTLDSGKHIICDRYAYSGIAYSSSKPGMSF---D 114 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD + LD+ + LKR + +E+ V K R I+ Sbjct: 115 WCANSDNGLPTPDLILFLDVSPEEALKR--------GGFGDEVYEK--VEFQAKVRDIYS 164 Query: 179 DIARNQPDRCHIV--DSAHSFQSVATNILNIVWE-LVQKRVSPLSS 221 + V D S + T + ++ + LV++R SP S Sbjct: 165 KRLFGKGGEWKWVSTDG-KSLDELYTELRTLIEDTLVKERDSPPSP 209 >gi|308805831|ref|XP_003080227.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri] gi|116058687|emb|CAL54394.1| thymidylate kinase family protein (ISS) [Ostreococcus tauri] Length = 1006 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 18/225 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G + FEG + GK+T L + L+++ + R P T L D Sbjct: 357 SRGALVLFEGADRCGKSTQARRLVKTLEQRGVRAELWRYPDRTTKTGEMIDAYLRSESDT 416 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A A ++FAA R + + ++ L +G L+CDR+ S A+ + + L L + Sbjct: 417 ADA-AIHLLFAANRWE-KKALMERKLADGVTLVCDRYSYSGCAFTAAK-GVEGLDLTWCK 473 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD + L+L ++ +R + +E + +++F + Sbjct: 474 APEVGLPRPDALMYLELSLEDAARR--------GGFGEERYE--TTEMQRAVKEMFESM- 522 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS--PLSSKKD 224 +P ++D+ + + +L I +++ S PL + D Sbjct: 523 -REP-WWDVIDANRDEEVIEREVLEIALGAIERAKSGEPLGTLWD 565 >gi|146420481|ref|XP_001486196.1| hypothetical protein PGUG_01867 [Meyerozyma guilliermondii ATCC 6260] Length = 215 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 79/214 (36%), Gaps = 21/214 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GKTT +L + + + + P + + L+ Sbjct: 2 RGHLILIEGLDRSGKTTQTQILHNAIPSSS----LIKFPDRSTNIGTIINQYLTDHNFSL 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----DSSQHLFLD 118 +A ++F+A R + + I L G ++ DR++ S AY + + ++ Sbjct: 58 SDQAAHLLFSANRWELAAS-IEDQLQAGHTVIMDRYIYSGIAYSLAKLETSSLPEMASVE 116 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L PD TI L L + R +S + +E+ E ++ FL Sbjct: 117 WLYAPDRGLPKPDVTIFLTLDIAEMAAR--------KSWGEERYEQTK--FQEVVKRCFL 166 Query: 179 DIARNQPD-RCHIVDSAH-SFQSVATNILNIVWE 210 + D IVD VA I +V E Sbjct: 167 KVLDPHADPSVVIVDVNKLGIDEVALKIWTVVEE 200 >gi|16081254|ref|NP_393560.1| thymidylate kinase [Thermoplasma acidophilum DSM 1728] gi|13629142|sp|Q9HLZ2|KTHY_THEAC RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|10639227|emb|CAC11229.1| conserved hypothetical protein [Thermoplasma acidophilum] Length = 193 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 53/218 (24%), Positives = 94/218 (43%), Gaps = 36/218 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+GAGKTT + L + Y V++T+EP + G Sbjct: 1 MFIAIEGIDGAGKTTLARGIGNMLLGEGYRVYMTKEPT-------------DGMENYAGD 47 Query: 65 EAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------DSSQHLF 116 E + F R H + R + G+I++CDR++ SSYAYQ E + Sbjct: 48 GVELFLKFTINRYAHQREIDRH-IKNGEIVICDRYIRSSYAYQFEGIAEFFGNSEKAWEW 106 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +DS+ EI ++ PD I +D+ + ++R+ R +FE + + RQI Sbjct: 107 MDSVSEII--KIRPDVQIYVDVDEETAMERISRRGLRNP-----HFENEQKL--RSVRQI 157 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + IVD +++ + + +++ Sbjct: 158 YKGFQWD-----LIVDGGRDKEAIISETFEKIIARLRQ 190 >gi|257057066|ref|YP_003134898.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] gi|256586938|gb|ACU98071.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] Length = 220 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 11/217 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G + EG++GAGK T L L+ V P G A+ R L D Sbjct: 2 GRLVVVEGLDGAGKRTLTESLTAALREHGATVTTMTFPRYGRDVHADLVREALHGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLD 118 A+++A R + IR AL E ++L DR++ S+ AYQ R + Sbjct: 62 AESVYGMAVLYALDRRG-ARDDIRRALDEHDVVLLDRYVASNAAYQAARLRQGVDGPVVR 120 Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++E+ + +PD ++L +PV++ +R R S D FE D + + + Sbjct: 121 WVRELEIDRFGLPVPDTQLLLRVPVEVAAERAVARERQDTSRTRDAFES-DDALQARCAR 179 Query: 176 IFLDIARNQP-DRCHIVDSAHSFQSVATNILNIVWEL 211 ++ ++A + ++D S + ++ + EL Sbjct: 180 VYDELAASHWLSEWRVLDGTRSVAANREAMVVLAKEL 216 >gi|58580054|ref|YP_199070.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622050|ref|YP_449422.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188578974|ref|YP_001915903.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A] gi|73920833|sp|Q5H5T5|KTHY_XANOR RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|123523407|sp|Q2P8H9|KTHY_XANOM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|229621848|sp|B2SS96|KTHY_XANOP RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|58424648|gb|AAW73685.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365990|dbj|BAE67148.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523426|gb|ACD61371.1| thymidylate kinase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 227 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 39/233 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I+ EGI+GAGKTT L L+ V +++EP P R S Sbjct: 8 GGLLIAIEGIDGAGKTTLARRLTTTLEAAGARVVLSKEPTNGPWGTKLRQ---SAATGRL 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ EA + R +HV+ +I PAL G I++ DR+ S AYQG L+ L Sbjct: 65 SADEEAELLIRDRHEHVDTLIAPALARGDIVILDRYFPSMVAYQGAAGLPLDELLE-LNA 123 Query: 123 ISVQEVMPDCTIILDLP-----------VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + P GL R++ R ++FE +D + E Sbjct: 124 FA--------------PRPDVLLLLDLPPPTGLARIRARGD-----APNHFETQDNL--E 162 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + R IF + P + H+VD++ SV I+ + R+S + D Sbjct: 163 RCRTIFAGL--ELPGK-HVVDASADADSVLRQAHAIIVAALADRLSGDGAPAD 212 >gi|161529215|ref|YP_001583041.1| thymidylate kinase [Nitrosopumilus maritimus SCM1] gi|160340516|gb|ABX13603.1| thymidylate kinase [Nitrosopumilus maritimus SCM1] Length = 193 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 83/209 (39%), Gaps = 19/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFG 63 + I EG + AGK T ++L++ L+++ + P T + R L G +F Sbjct: 1 MIIVIEGGDQAGKLTQSTMLEKALKKRKIKTKLFHFPDYKTHIGKEIRQYL--DGKRKFP 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + +A R + +E I+ A + +L+ +R+ S+ Y + L+ + Sbjct: 59 PQVIHCLLSANRWEKLEQ-IKTAQEKNSVLIMNRYYHSNLVYGLANGMKE----KWLESL 113 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 D I+LD+ R + D FE+ + K +I+ A+ Sbjct: 114 DAGLPKADLVILLDVTQKESFNR--------QKTNRDKFEK-NEEFLRKISRIYKTTAKK 164 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R I+D+ S Q V I+ + + Sbjct: 165 --KRWKIIDATKSKQEVHEEIMKTFSKKI 191 >gi|148264612|ref|YP_001231318.1| thymidylate kinase [Geobacter uraniireducens Rf4] gi|146398112|gb|ABQ26745.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 227 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 49/220 (22%), Positives = 95/220 (43%), Gaps = 22/220 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I EG +G+G++T + LLK +L+ K + T +E + Sbjct: 17 AGKLIVIEGADGSGRSTQMELLKDYLEGKGHATVNVGLLRSTLVSEELNEA---KQGNVL 73 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G ++ +A D +EN I PA+ G I+L DR++ + A + ++ +L Sbjct: 74 GEITRSLFYATDFADQLENRIIPAMKAGFIVLADRYIYTLMARDIV-RGADRDWVRALYG 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQ---IFL 178 I+ V+PD I L + ++R + R+++ LDY+E D+ + + Sbjct: 133 IA---VVPDLVIYLRVSPAQLVER-----NFRKNSTLDYWEAGMDLGLSRDIFDSFMRYQ 184 Query: 179 DIARNQPD------RCHIVDSAHSFQSVATNILNIVWELV 212 + + + H+V+ S +S + I V +L+ Sbjct: 185 KLIQKEFSLLQQEYGFHVVNGNRSIRSASGEITARVEDLL 224 >gi|308472179|ref|XP_003098318.1| hypothetical protein CRE_07671 [Caenorhabditis remanei] gi|308269166|gb|EFP13119.1| hypothetical protein CRE_07671 [Caenorhabditis remanei] Length = 210 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 77/216 (35%), Gaps = 21/216 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G+ I FEG++ +GK+T L L + + V +P + L Sbjct: 6 KRGVLIVFEGLDRSGKSTQAKRLVESLNKRAEGSAVLQAFPDRSSPIGKLIDQYLK--KE 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + ++F+A R +IR + +G ++CDR+ S AY + + Sbjct: 64 IDLDEHSLHLMFSADRF-LKNQMIRENIAKGIDVICDRYCYSGVAYSLAKGLPEQ----W 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ V PD + D+ + +R + E + +K + Sbjct: 119 VRSSDVGLPKPDAVLFFDVSPAVAAQR--------GGFGAERLE--TATMQQKVAAVMPT 168 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + V++ +V ++ + L +++ Sbjct: 169 L--RDDSFWKTVNADGDLDTVEKDVFRLYENLNREK 202 >gi|17535647|ref|NP_496151.1| hypothetical protein R53.2 [Caenorhabditis elegans] gi|3024082|sp|Q22018|KTHY_CAEEL RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|3879168|emb|CAA91347.1| C. elegans protein R53.2, confirmed by transcript evidence [Caenorhabditis elegans] Length = 218 Score = 129 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 31/234 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR 51 GL I FEG++ +GK+T L + +K+ + V + + Sbjct: 6 KRGLLIVFEGLDRSGKSTQAKRLVESINKKSTESGDASSSPSAVLQAFPDRSSSIGKLID 65 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 L + A ++F+A R +IR + +G ++CDR+ S AY + Sbjct: 66 QYL--RKEIDMDEHALHLLFSADRF-SKNQMIRDNIAKGIDVICDRYCYSGVAYSLAKGL 122 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + ++ V PD + D+ ++ +R + E I + Sbjct: 123 PEQ----WVRSSDVGLPKPDAVLFFDVSPEVAAQR--------GGFGEERLE--TATIQQ 168 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 K + + V++ SV N+ I L R P S + I Sbjct: 169 KVAAVMPTL--RDDAYWKTVNADGDLDSVEKNVFRIYENL--DREKPFESLEKI 218 >gi|325108330|ref|YP_004269398.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305] gi|324968598|gb|ADY59376.1| Thymidylate kinase [Planctomyces brasiliensis DSM 5305] Length = 228 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 88/218 (40%), Gaps = 17/218 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVL--LSCGVDE 61 FI+ EGI+G+GK T + L L + P T + L +D Sbjct: 4 FIAIEGIDGSGKGTQTAALCDHLNAQGLRCDTITFPRYAETLLGKQIGRFLDGQFGALDH 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 ++++A R + ++I L +L+ DR++ S+ A+QG R + FL Sbjct: 64 LHPVPISLMYATERYES-RSLIEEKLNNCDVLIADRYVGSNLAHQGARLEGDERAEFLKF 122 Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++++ + P+ ++LDLP D RV + + + + + R++ Sbjct: 123 IEKLEYELFAVPRPELVLLLDLPADASAARVAKKKARDYTQQVTDLHESNHEYLADVREV 182 Query: 177 FLDIARNQPDRCHIVD------SAHSFQSVATNILNIV 208 +L+++ + V + S + + +IV Sbjct: 183 YLELSETF-ENWSRVSCLSPNGADRSIDEIQQELRDIV 219 >gi|157956089|gb|ABW06432.1| thymidylate kinase [Wheat blue dwarf phytoplasma] Length = 209 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 20/211 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I L+ L+ + + G + + R + L+ + Sbjct: 3 KLIVFEGLDGSGKTSLIQYLQPQLKT---PHQLYQGLGSSSIGKEIRDLFLN--FQQVDY 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + + + ++++ DR+L S++AYQ S + L L++I Sbjct: 58 LTRFYLSLANMAQIQAELFK----KNQLIILDRWLPSNFAYQLFPFSKEKKQLFPLKKIF 113 Query: 125 VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + PD I LD+ IG R + + + + D ER+ + + RQ + Sbjct: 114 KLNHETILIKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERESLTYFQTVRQGYNH 169 Query: 180 IARNQPDRCH--IVDSAHSFQSVATNILNIV 208 + I++ + S ++ I+ + Sbjct: 170 YLTHYTSGFKNLILNGSDSIKANVKQIIKQI 200 >gi|159467731|ref|XP_001692045.1| hypothetical protein CHLREDRAFT_128562 [Chlamydomonas reinhardtii] gi|158278772|gb|EDP04535.1| predicted protein [Chlamydomonas reinhardtii] Length = 214 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 16/212 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I FEG + GKTT S + L+ + D + R P + + AA + LS + Sbjct: 8 RGALIVFEGGDRCGKTTQCSKMVERLKSQGVDAVMWRFPDRSTSIGAAINAYLS-NQSQL 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F A RL+ + ++R L G L+ DR+ S AY + HL +D + Sbjct: 67 DDAVIHMLFVANRLEKRDEMLR-LLAGGTTLVLDRYSYSGVAYTAAK-GVPHLSIDYCKS 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + V D + + + + R + +E+ V + + F + Sbjct: 125 LEVVLPAADLVVHMSMSAEATAAR--------GGYGEERYEK--VEFQARVMEAFGQLRD 174 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +R +D+A + ++ + +V +V++ Sbjct: 175 ---ERWAAIDAAGTIDAIHEQVAAVVEPVVRR 203 >gi|326792104|ref|YP_004309925.1| thymidylate kinase [Clostridium lentocellum DSM 5427] gi|326542868|gb|ADZ84727.1| thymidylate kinase [Clostridium lentocellum DSM 5427] Length = 203 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 92/209 (44%), Gaps = 13/209 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F +F+G G GK+T I+ + LQ + +V T EP + R + + E Sbjct: 4 FFAFDGPNGVGKSTLINEVSNMLQERGIEVLNTSEPSTLEIGKFTRRI-----SEYVRKE 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + AA R +H+ VI+PAL E +I+LCDR++ SS QG + L+ + Sbjct: 59 TLACLVAADRYEHINKVIQPALDEKRIVLCDRYIASSLVLQGIDGVDEQFILNLCNNM-- 116 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 ++PD IL KR++ R +L E +V + + I N Sbjct: 117 --ILPDIYFILIASPYTIRKRLKERENLTRFERESKIEYLEVEYFKNA----VTILENMG 170 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +++ +S ++ +L + +++ Sbjct: 171 IEVYEINTDNSPENCIQQVLEAILVKIKQ 199 >gi|315925896|ref|ZP_07922101.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263] gi|315620717|gb|EFV00693.1| thymidylate kinase [Pseudoramibacter alactolyticus ATCC 23263] Length = 231 Score = 128 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 74/224 (33%), Gaps = 17/224 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57 +G I EG++G+GK T L L + V P + A L+ Sbjct: 5 QAGKLIVIEGVDGSGKQTQSQRLYGRLAAQGKRVLRVAYPRYDEDSSAMVRHYLAGDFGE 64 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QH 114 D A FAA R I P L G +++ DR+ ++ +Q + + + Sbjct: 65 DPDAVSPYVAATFFAADRYASYRQEIGPFLAGGGLVIADRYTTANMLHQAGKIADAAARQ 124 Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FLD L++ + PD I LD+P + + R + E Sbjct: 125 AFLDWLEDYEFRLLGLPRPDAVIYLDMPPEASGTLMAGRANKMTGKAAKDIHESHPAYLE 184 Query: 172 KRRQIFLDIARNQPDRCHIVDS-----AHSFQSVATNILNIVWE 210 + + + +D S ++ + + + Sbjct: 185 RAYRAGRALVARYG--WTRIDCLKDGVLQSVDAIGGAVEAALRD 226 >gi|125974597|ref|YP_001038507.1| thymidylate kinase [Clostridium thermocellum ATCC 27405] gi|256004041|ref|ZP_05429026.1| thymidylate kinase [Clostridium thermocellum DSM 2360] gi|281419122|ref|ZP_06250139.1| thymidylate kinase [Clostridium thermocellum JW20] gi|125714822|gb|ABN53314.1| thymidylate kinase [Clostridium thermocellum ATCC 27405] gi|255991964|gb|EEU02061.1| thymidylate kinase [Clostridium thermocellum DSM 2360] gi|281407271|gb|EFB37532.1| thymidylate kinase [Clostridium thermocellum JW20] gi|316941715|gb|ADU75749.1| thymidylate kinase [Clostridium thermocellum DSM 1313] Length = 227 Score = 128 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 45/229 (19%), Positives = 81/229 (35%), Gaps = 20/229 (8%) Query: 3 SGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57 G I E G + +GK T + L L ++ Y V P + A + L+ Sbjct: 2 KGKLIIIESGADASGKATQTNKLYERLVQEGYKVKKITFPNYDSDSSALVKMYLNGDFGK 61 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115 ++ + +A R A +G I+L DR+ S+ +Q + Sbjct: 62 DPNDVSPYVASTFYAVDRFASYRTEWGQAYNDGWIILADRYTTSNMVHQAAKIKDMEEKD 121 Query: 116 -FLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIH 170 FLD L + +PDC I LD+P + ++ R + D ER D + Sbjct: 122 RFLDWLWNFEFEIYKLPVPDCVIFLDMPPSFSRELMKERANKFTGEQKKDIHERNDEYLV 181 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHS-----FQSVATNILNIVWELVQK 214 E R L +A+ ++ + + V ++++ Sbjct: 182 ESYRNS-LYVAKKY--NWIKIECVKDGVLKKIDEIQKEVYEAVSGIIRQ 227 >gi|261367061|ref|ZP_05979944.1| dTMP kinase [Subdoligranulum variabile DSM 15176] gi|282571180|gb|EFB76715.1| dTMP kinase [Subdoligranulum variabile DSM 15176] Length = 223 Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 46/226 (20%), Positives = 84/226 (37%), Gaps = 21/226 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I FEG++G+GK T +L + L+ D+ P + A + LS Sbjct: 2 GKLIIFEGLDGSGKGTQTALTAQKLKAHGVDLRQITFPNYESDSSALVKMYLSGQFGDKP 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FL 117 D+ A A + +A R + G ++L DR+ S+ +Q + H FL Sbjct: 62 DDVNAYAASSFYAVDRFASYKTDWGDFYRAGGLILSDRYTTSNAVHQCAKLPPMHWDGFL 121 Query: 118 DSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L + + PD + L + ++ K + RY ES + KD + R Sbjct: 122 NWLFDFEYKKIGIPAPDAVVYLAVDPEVSQKLMDQRYHGDESKKD--IQEKDREYIARSR 179 Query: 175 QIFLDIARNQPDRCHIVDSA--------HSFQSVATNILNIVWELV 212 A+ + ++ S + + IL + ++ Sbjct: 180 AAAEYCAKMFG--WYRIECTEGQDVKTIRSVEDINAEILAKIQPIL 223 >gi|307188610|gb|EFN73327.1| Thymidylate kinase [Camponotus floridanus] Length = 209 Score = 128 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 75/213 (35%), Gaps = 18/213 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + AGK+T + +L L P + LS ++ Sbjct: 4 KRGALIVLEGCDRAGKSTQMKMLINALNDLRIPAENIAFPNRKTPVGSILDSFLSKKIN- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R + + + L+ G L+ DR+ S Y L+ Q Sbjct: 63 VPPETAHLLFSANRWE-CKEDMEKTLLSGVTLIVDRYAASGAVYTAANTG---RSLNWCQ 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PDC + L + + + R + FE ++ + + Sbjct: 119 QPDLGLPKPDCVMFLKVS--------KRQQEQRSDWGKERFEH--DEFQQRVNANYEKLR 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D +++ +V + IL + ++Q+ Sbjct: 169 D---DTWITINADQDESAVHSEILRMALSVIQE 198 >gi|269986147|gb|EEZ92460.1| thymidylate kinase [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 202 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 16/208 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEF 62 G I EGI+GAGK T +LK L+ + V V P + E + L + Sbjct: 3 GKLIVIEGIDGAGKATQAKILKEQLESQGKTVSVYSYPDYSSVYGERIKSFLYKKIDLKV 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +++ + +I + +G +L DRF S+ AYQ S +E Sbjct: 63 DEL--FMLYLIDMVKDRNRIIED-IKKGNDVLIDRFFFSTIAYQSAGGFSYETG----KE 115 Query: 123 ISVQEVMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 MP T +++PVDI ++R + + + +D FE + +++ + Sbjct: 116 FVKLLGMPPITVVFYINVPVDISMQRKEKQKGKMD---VDKFESNKM-FLSNVSKVYDQL 171 Query: 181 ARN--QPDRCHIVDSAHSFQSVATNILN 206 + +D + S + +++ I Sbjct: 172 KSENFYAKKWVEIDGSKSIEEISSLIKE 199 >gi|268679911|ref|YP_003304342.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946] gi|268617942|gb|ACZ12307.1| thymidylate kinase [Sulfurospirillum deleyianum DSM 6946] Length = 194 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 14/207 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ FEG++ +GK+T +SL +++ VH T+EPGGTP R +LL G + Sbjct: 1 MYVIFEGVDTSGKSTQVSL----FAKRHPHVHATKEPGGTPTGSKLREMLL-GGELKGSF 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEI 123 AE +F A R H + V++P L KI++ DR S AY S FL + + Sbjct: 56 NAELFLFLADRAFHYDTVVKP-LRHEKIVMSDRGFLSGIAYACANHSDIDGTFLLQMNRL 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++E P+ ++ + + ++ R ++E D E + V + + I +A+ Sbjct: 115 ALEEDYPEKMVLF-VSNE---HLIKERLGMKE---HDAIEERGVSYLLQIQDIMRRVAKT 167 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 P + VD+A +++ I + + Sbjct: 168 LPIKVLEVDAAQDIETLYRQIEEFLND 194 >gi|326428009|gb|EGD73579.1| thymidylate kinase [Salpingoeca sp. ATCC 50818] Length = 213 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 79/216 (36%), Gaps = 21/216 (9%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I EG + GK+T LL L ++ + R P + L ++ Sbjct: 3 RRGVLIVLEGTDRCGKSTQCKLLVEKLASLGHEAKLMRFPERSTVIGGVIDKYLRKEIE- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + V ++ AL G L+ DR+ S A+ + L +D + Sbjct: 62 LDDHAAHLLFSANRWELVSQ-MKQALKSGVSLVIDRYAFSGVAFTSAKG----LDMDWCK 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD I L+L KRV + +E K + + D+ Sbjct: 117 SPDANLPSPDLHIHLELDPTEAAKRV--------GFGSERYEVT--EFQAKVKAKYEDLY 166 Query: 182 R---NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 P R + + S + V +L + E +Q Sbjct: 167 ASMTRPPRRIDV--AGLSIEDVHAKVLELALEQLQD 200 >gi|13541004|ref|NP_110692.1| thymidylate kinase [Thermoplasma volcanium GSS1] gi|23821802|sp|Q97CC8|KTHY_THEVO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|14324388|dbj|BAB59316.1| thymidylate kinase [Thermoplasma volcanium GSS1] Length = 190 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 34/215 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+GAGKTT L L+++ + V +TREP E Sbjct: 1 MFIAVEGIDGAGKTTLAKSLSSLLEKEGFRVFLTREPTD------------DIRNYEGDD 48 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------DSSQHLFL 117 I F R H + IR L EG +++ DR++ SSYAY+ + + ++ Sbjct: 49 VELFIKFTLDRYKHQKE-IRKKLNEGFVVISDRYIRSSYAYEMKGAAAALGSEEKAKEWM 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D + I + PD I++ + V +GL R+ R + + +FE++ E+ + Sbjct: 108 DCVSNIIT--IRPDINILVQVDVQVGLDRISKR-----NGTITHFEQR-----ERLNEA- 154 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L I + + D + + + + Sbjct: 155 LKIYNSFDWDIKV-DGTDPLDKITNEVYLYLKNKI 188 >gi|302543876|ref|ZP_07296218.1| dTMP kinase [Streptomyces hygroscopicus ATCC 53653] gi|302461494|gb|EFL24587.1| dTMP kinase [Streptomyces himastatinicus ATCC 53653] Length = 256 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 20/211 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G+F++ +G G GK+T + + L+ H TREP T AR G D++ Sbjct: 59 TGMFVTIDGPGGVGKSTLTAAVVAELRAACVTAHATREPSDTALGRLARQ-----GTDDY 113 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A A + AA R H+E+ IRPA+ G +++CDR++ SS Q + D + E Sbjct: 114 RGMAMACLIAADRYQHLEDEIRPAVARGDVVVCDRYVASSLVLQVMDGVGR----DLVWE 169 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ MPD +IL+ D+ KR+ R +ER+ ++ F + AR Sbjct: 170 LNRHADMPDLAVILNARDDVIEKRLTER------GAHSRYERE-FGSSQRECAAFREAAR 222 Query: 183 -NQPDRCHIV--D-SAHSFQSVATNILNIVW 209 H+V D + + +A +I+ + Sbjct: 223 FLMAAGVHVVQFDVTTEGPERIARDIVAAIR 253 >gi|302519849|ref|ZP_07272191.1| thymidylate kinase [Streptomyces sp. SPB78] gi|302428744|gb|EFL00560.1| thymidylate kinase [Streptomyces sp. SPB78] Length = 216 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 15/164 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G FI+ +G G GK+T ++ L L+ + VH T EP +P + R D Sbjct: 1 MTAGRFITLDGPGGVGKSTTVAALAGLLRDQGEHVHTTTEPSTSPLGQFTR-----GHAD 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A A + AA R DH+ IRP L G ++CDR+L S+ Q + LD Sbjct: 56 QISGHALACLVAADRYDHINTEIRPRLDAGDTVVCDRYLASTLVVQRLDGVPERFLLD-- 113 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 ++ V+PD ++L R+ R + FER Sbjct: 114 --LNADIVLPDVAVLLTAAPGTITDRLTGRGAHH------RFER 149 >gi|237736219|ref|ZP_04566700.1| thymidylate kinase [Fusobacterium mortiferum ATCC 9817] gi|229421772|gb|EEO36819.1| thymidylate kinase [Fusobacterium mortiferum ATCC 9817] Length = 227 Score = 127 bits (321), Expect = 8e-28, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 81/224 (36%), Gaps = 13/224 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G I EG + +GK T L L + V P A + L+ + Sbjct: 4 NMGKLIVIEGTDSSGKETQTKKLYERLANEVEKVRKISFPNYESPACEPVKMYLAGAFGD 63 Query: 62 ----FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQH 114 + +FA R + G I++ DR+ S+ +Q + + Sbjct: 64 NALNVNPYPVSTMFAIDRYASYKMDWESFYNAGGIIVTDRYTTSNMVHQASKIENIDEKS 123 Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 +L L+++ + PD I L++P ++ +K ++ R + KD + Sbjct: 124 KYLGWLEDLEYNKMGIPKPDLVIFLNMPTEMAVKLMEARKNKITGEEKKDIHEKDTSYLK 183 Query: 172 KRRQIFLDIARNQP-DRCHIVDSAH--SFQSVATNILNIVWELV 212 K DIA+ V++ + + + I +V E++ Sbjct: 184 KSYDNACDIAKKYNWQEIKCVENKRLKTIEEIGEEIYTLVKEIL 227 >gi|307243785|ref|ZP_07525917.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678] gi|306492839|gb|EFM64860.1| dTMP kinase [Peptostreptococcus stomatis DSM 17678] Length = 233 Score = 127 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 79/230 (34%), Gaps = 16/230 (6%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG- 58 M +F E G +G+GK T LL L+ Y V P + A + L Sbjct: 1 MQGSVF-VIESGTDGSGKATQTKLLYDRLKADGYKVIKVSYPNYDSDSSALVKMYLRGDF 59 Query: 59 ---VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSS 112 D+ A + +AA R + EG I++ DR+ S+ +Q + Sbjct: 60 GKKADDVDAYIASTFYAADRYASYKTEWEDFYQEGGIVIADRYTTSNMVHQASKMDDIEE 119 Query: 113 QHLFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + FLD L + P LD+PVD+ +++R + + D Sbjct: 120 RASFLDWLDQYEYGLYKLPRPREVYFLDVPVDVSQDLIRDRKNKFTNESQKDIHESDKDY 179 Query: 170 HEKRRQIFLDIARNQPDRCHI-VD---SAHSFQSVATNILNIVWELVQKR 215 K + +A +D + S + I V ++ + Sbjct: 180 LVKTYENSKFVADKYQWHIVKCIDQDRNMRSVDQIHEEIYTRVISAIESK 229 >gi|226365793|ref|YP_002783576.1| thymidylate kinase [Rhodococcus opacus B4] gi|226244283|dbj|BAH54631.1| thymidylate kinase [Rhodococcus opacus B4] Length = 227 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G I+ EG++GAGK T + + L + V P G + A+ A L D Sbjct: 2 GTLIALEGLDGAGKRTLVGAVVDRLTERGLTVGTLDFPRYGRSVHADLASEALKGAHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R V + L +++ DR++ S+ AY R ++ F+ Sbjct: 62 AESVHAMAVMFALDRSGAVGEL-SDLLAGHDLVILDRYVASNAAYGAARLHQAADGEFVG 120 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + + PD + LD+PV + +R + R S S LD +ER D + E+ + Sbjct: 121 WVENLEFERLGLPRPDLQLYLDVPVALAAQRARGRESADASRSLDAYER-DRGLQERTGE 179 Query: 176 IFLDIARNQ 184 ++ ++A Sbjct: 180 VYRELAVKD 188 >gi|157116910|ref|XP_001652904.1| Thymidylate kinase, putative [Aedes aegypti] gi|108883432|gb|EAT47657.1| Thymidylate kinase, putative [Aedes aegypti] Length = 249 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 77/212 (36%), Gaps = 18/212 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + AGKTT + L + P + A + L+ D Sbjct: 45 KRGALIVLEGCDRAGKTTQCKRIVESLNSAGHKAKFMNFPDRSTQFGALINSYLTSK-DN 103 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F EA ++F R + +N + L G L+ DR+ S A+ + L +D + Sbjct: 104 FTDEAIHLLFTLNRWE-AKNEMERLLRSGVTLIVDRYSYSGVAFSAAKG----LNMDWCK 158 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD ++L L + KR + +E + +K + F + Sbjct: 159 APETGLPKPDLVLLLTLTAEAMAKR--------GGFGQERYE--VPELQKKVMEKFHTL- 207 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +VD+ +++ + +V + ++ Sbjct: 208 -KDDSYWKVVDADKKEDALSLELCEMVLDSME 238 >gi|118474238|ref|YP_892065.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40] gi|254808284|sp|A0RPD2|KTHY_CAMFF RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|118413464|gb|ABK81884.1| thymidylate kinase [Campylobacter fetus subsp. fetus 82-40] Length = 192 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 18/207 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++FEG++G GK+T ISLLK F D +T+EPGGT R LL + Sbjct: 1 MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123 + E +F A R +H E V++P ++L DR S AY D S L L + Sbjct: 56 KTEIFLFLADRAEHYEKVLKPNYAN--LVLNDRSFVSGMAYAMANDSSLDIGLLLDLNKF 113 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ + D + L + R+ +R + E E + + + Q F+ I + Sbjct: 114 ALNSDLGDKFVFLKADEILLRNRLFSRGTSDE------IEMRGIEYLMRV-QGFMSIILS 166 Query: 184 QPDRCHI--VDSAHSFQSVATNILNIV 208 + + +D++ + I + Sbjct: 167 D-LKFDVLEIDASLEVLEIQEKIRKFI 192 >gi|39939038|ref|NP_950804.1| hypothetical protein PAM_552 [Onion yellows phytoplasma OY-M] gi|39722147|dbj|BAD04637.1| hypothetical protein [Onion yellows phytoplasma OY-M] Length = 138 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKTT I +++ L+++ +V + G + + R + L+ + Sbjct: 2 KLIVFEGLDGSGKTTLIQKVRKQLEKQGQEVITLQGLGSSSIGQPLRDIFLT--NAQLKP 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ A E I+P L KI+L DR+L S++AYQ + + ++ Sbjct: 60 LTRYLLSFANMQQIQEEEIKPHLETNKIILIDRWLGSNFAYQAYPRNIDKNY-QLFNLLN 118 Query: 125 VQEVMPDCTIIL 136 Q + PD T+ + Sbjct: 119 KQFIKPDMTLFI 130 >gi|261330431|emb|CBH13415.1| thymidylate kinase, putative [Trypanosoma brucei gambiense DAL972] Length = 345 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 95/229 (41%), Gaps = 31/229 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVD 60 G I FEG +GAGK T +++ L ++ P + R VL + Sbjct: 128 GAVIVFEGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLSGERGALH 187 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 + + +++F+ R D + + R L GK +L DR+ S++ +Q + +S + F+ Sbjct: 188 DLDPKLFSLLFSLNRFDTLPEL-RYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIR 246 Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L+++ ++ + PD + LDLP L R RES LD E + E RQ Sbjct: 247 HLEQLELEWLKLPPPDVALYLDLPPAAALV-AMQRDEKRES--LDIHETAGLSYKENVRQ 303 Query: 176 IF------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++ ++ +R S + V I N V + + Sbjct: 304 TYVWCCQNQRNWVQIECCNDEGERY-------SREKVHEMIYNAVAKHI 345 >gi|145348882|ref|XP_001418872.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579102|gb|ABO97165.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 218 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 81/213 (38%), Gaps = 18/213 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDE 61 G F+ FEG + GK+T L L+ + + + R P T + L S E Sbjct: 10 RGAFVLFEGADRCGKSTQAMRLVHTLEARGVEAELWRYPDRATAMGKMIDQYLRSKS--E 67 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++FAA R + + ++ L G L+CDR+ S A+ + L L+ + Sbjct: 68 MEDGAIHLLFAANRWE-KKALMERKLASGVTLVCDRYSYSGCAFTAAK-GVDGLDLEWCR 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD + L+L ++ KR + +E + + F + Sbjct: 126 APEVGLPRPDALMYLELSLEDAAKR--------GGFGEERYE--TTEMQRAVKASFEAMR 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 D ++D+ + +L I V+K Sbjct: 176 E---DWWDVIDANREPDVIQDEVLRIALSAVEK 205 >gi|14601836|ref|NP_148377.1| thymidylate kinase [Aeropyrum pernix K1] gi|8134528|sp|Q9YA48|KTHY_AERPE RecName: Full=Putative thymidylate kinase; AltName: Full=dTMP kinase gi|5105789|dbj|BAA81101.1| thymidylate kinase [Aeropyrum pernix K1] Length = 208 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 49/214 (22%), Positives = 92/214 (42%), Gaps = 18/214 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EGI+G+G +TH LL L + +EP P R L S + + Sbjct: 2 RIVALEGIDGSGVSTHSRLLHARLAGAGVKSCLWKEPTEGPVGRLIRGFLRS--TEGVDS 59 Query: 65 EAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A++FAA RL + V+ ++L+ DR+ SS AYQG L+ + + Sbjct: 60 DLMALLFAADRLWGLRLGVVERCGGSPEVLVVDRYKYSSLAYQGVGSG-----LEWVDAV 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + + + +D+P ++ L+R+ R ++ ER ++E+ L +AR Sbjct: 115 NRKAPEAEILVYIDVPTEVALRRITARERREVFETPEFLERVK-SMYEEV----LRLARA 169 Query: 184 QPDRCHIVDS-----AHSFQSVATNILNIVWELV 212 + + V+ + V I V+E + Sbjct: 170 RGVKVIRVEGVRGGVERGIEDVQGEIAERVFEAL 203 >gi|72392843|ref|XP_847222.1| thymidylate kinase [Trypanosoma brucei TREU927] gi|62358480|gb|AAX78942.1| thymidylate kinase, putative [Trypanosoma brucei] gi|70803252|gb|AAZ13156.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 345 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 94/226 (41%), Gaps = 31/226 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVDEFG 63 I FEG +GAGK T +++ L ++ P + R VL + + Sbjct: 131 IVFEGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLSGERGALHDLD 190 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + +++F+ R D + + R L GK +L DR+ S++ +Q + +S + F+ L+ Sbjct: 191 PKLFSLLFSLNRFDTLPEL-RYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHLE 249 Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177 ++ ++ + PD + LDLP L R RES LD E + E RQ + Sbjct: 250 QLELEWLKLPPPDVALYLDLPPAAALV-AMQRDEKRES--LDIHETAGLSYKENVRQTYV 306 Query: 178 -----------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ ++ +R S + V I N V + + Sbjct: 307 WCCQNQRNWVQIECCNDEGERY-------SREKVHEMIYNAVAKHI 345 >gi|75706618|gb|ABA25861.1| thymidylate kinase [Phytoplasma sp. CPh] Length = 209 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 20/214 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I+ L+ L+ + + G + + R + L+ + Sbjct: 3 KLIVFEGLDGSGKTSLINYLQPQLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + + + ++++ DR+L S+YAYQ S + L L++I Sbjct: 58 LTRFYLSLANMAQIQAELFK----KNQLIILDRWLPSTYAYQLFPFSKEKQQLFPLKKIF 113 Query: 125 VQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD I LD+ IG R + + + + D ERK + + RQ + Sbjct: 114 KLNHETILNKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERKSLTYFQTVRQGYNH 169 Query: 180 IARNQPDRCH--IVDSAHSFQSVATNILNIVWEL 211 + I++ + S ++ I+ + L Sbjct: 170 YLTHYTSDIKKLILNGSDSIKTNVKQIIKQIGTL 203 >gi|38233300|ref|NP_939067.1| thymidylate kinase [Corynebacterium diphtheriae NCTC 13129] gi|38199559|emb|CAE49210.1| Putative thymidylate kinase [Corynebacterium diphtheriae] Length = 205 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 56/210 (26%), Positives = 94/210 (44%), Gaps = 13/210 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFG 63 + I+ EGI+GAGK T +S +K DV R A A R + S G Sbjct: 1 MIIAIEGIDGAGKNTLVSAIKERFDA---DVIGFPRYEQSIHAKLAQRALYGSMGDLTDS 57 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFLDSLQ 121 A A A +FA R D + V+ + K++L DR++ S+ AY R + ++ L+ Sbjct: 58 AYAMATLFALDRYD-AKAVLGRYVGTSKVVLLDRYVASNAAYSAARTRNDAMVQWVQELE 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +PD I+L ++ +R Q R + S LD +E +D + E+ Q + +A Sbjct: 117 FEELGLPVPDIHILLHTSPELAAQRAQRREATDASRKLDRYE-EDAGLQERTFQAYESLA 175 Query: 182 RNQ---PDRCHIVDSAHSFQSVATNILNIV 208 + + P +V S +V I+ + Sbjct: 176 QQKWMSP--WLLVHPDESPDTVTQRIIQAL 203 >gi|254570737|ref|XP_002492478.1| Thymidylate and uridylate kinase [Pichia pastoris GS115] gi|238032276|emb|CAY70299.1| Thymidylate and uridylate kinase [Pichia pastoris GS115] gi|328353509|emb|CCA39907.1| dTMP kinase [Pichia pastoris CBS 7435] Length = 202 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 75/210 (35%), Gaps = 27/210 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG++ GK+T + L L + + P + L+ + E Sbjct: 5 LIVIEGLDRTGKSTQTAKLCHRLNG-----FLVKFPNRETPIGKLLNQYLTDASNPMPLE 59 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 ++F+A R + V+N I L +G ++ DR++ S AY + L ++ Sbjct: 60 VAHLLFSANRWEMVKN-IEDLLSKGTPVVMDRYVYSGVAYSMAKG----LDIEWCLAPDK 114 Query: 126 QEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD TI L DL S RE + +E + R F + Sbjct: 115 GLPKPDVTIFLKANDLD----------SISQREGFGEERYEVASL--QTSVRNNFEILRS 162 Query: 183 NQPD-RCHIVDSAHSFQSVATNILNIVWEL 211 + + I+D V +I +V L Sbjct: 163 RYDEWKVIIIDG-KDIDQVHEHIWELVCPL 191 >gi|330803239|ref|XP_003289616.1| thymidylate kinase [Dictyostelium purpureum] gi|325080317|gb|EGC33878.1| thymidylate kinase [Dictyostelium purpureum] Length = 192 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 40/219 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 GLFI FEG + GK+T + L + +N R P TP + L + Sbjct: 3 KRGLFILFEGADRVGKSTQVQSLTNHISNSRNLPTKSLRFPDRTTPIGQILNQYLQNS-- 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A ++F++ R + ++ I L G ++ DR+ S AY + + +D Sbjct: 61 TNMDDRALHLLFSSNRWE-AKDSILELLNSGTNIVVDRYSYSGVAYTAAKG----IDVDW 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD L + + KR + +E++ Sbjct: 116 CYSCESGLPEPDIVFYLSMSTEDATKR--------GDYGGERYEKRPS------------ 155 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW---ELVQKR 215 ++++ + + V+ I I E +QK+ Sbjct: 156 --------WKVINANRTVEEVSNEINQIFDFEFESLQKK 186 >gi|256076848|ref|XP_002574721.1| thymidylate kinase [Schistosoma mansoni] gi|238659934|emb|CAZ30954.1| thymidylate kinase [Schistosoma mansoni] Length = 235 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 90/237 (37%), Gaps = 35/237 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58 M+ G+F+ EG + GKTT SLL + L + + P TP L G Sbjct: 5 MSQGIFVVLEGADRVGKTTQASLLAKALSEITQRETLSVKFPDRDTPLGHHLDSYL--SG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + A ++F A R + IR A+ G ++ DR++ S AY + + + Sbjct: 63 IGDINKHALHLLFTANRWERQAE-IRKAISNGIPVVADRYIYSGIAYTAAKAPPTPNW-E 120 Query: 119 SLQEISVQEVMPDCTIIL---DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 E+ V PD I L +L S R + +E + ++ + Sbjct: 121 WCWEMEKGLVEPDLVICLTPGNLDE----------LSSRNGYGKERYE--NDDFQKRVLE 168 Query: 176 IFLDIAR----NQPDR---------CHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218 ++ I++ + D H + + + + V I+ +V ++ + P Sbjct: 169 NYVRISKDVELDNKDNDDETDSVGLWHFIQATDKTVEEVHKCIMVLVKSKLESIIGP 225 >gi|257440771|ref|ZP_05616526.1| dTMP kinase [Faecalibacterium prausnitzii A2-165] gi|257196745|gb|EEU95029.1| dTMP kinase [Faecalibacterium prausnitzii A2-165] Length = 222 Score = 125 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 47/232 (20%), Positives = 86/232 (37%), Gaps = 30/232 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC--- 57 M+ G I EG++G+GK T LL + L ++ V P + A + L+ Sbjct: 1 MSKGKLIVLEGLDGSGKGTQAKLLAKHLTVTDHLVREITFPDYDSDSSALVKMYLAGQFG 60 Query: 58 -GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL- 115 D+ A A + +A R ++ EG IL+ DR+ S+ +Q + + Sbjct: 61 DKPDDVNAYAASSFYAVDRYAGYKSDWGKFYEEGGILIADRYTTSNAVHQCSKLPPEQWD 120 Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 FL L + + PD I L + + + + RY E+ +HE Sbjct: 121 TFLQWLFDYEYHLLGLPAPDKVIYLQVDPAVSQRLMTARYHGDETKK---------DVHE 171 Query: 172 KRRQIFLDIARNQPDRCH------IVDSA-----HSFQSVATNILNIVWELV 212 K + +L +R + C V S + + + + ++ Sbjct: 172 KDTE-YLARSRRAAEYCAAHLGWDTVHCTAGEKMRSIEDIQEEVRTLALAVI 222 >gi|253581348|ref|ZP_04858574.1| dTMP kinase [Fusobacterium varium ATCC 27725] gi|251836712|gb|EES65246.1| dTMP kinase [Fusobacterium varium ATCC 27725] Length = 232 Score = 125 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 80/222 (36%), Gaps = 13/222 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T L L + Y+V P A + L+ Sbjct: 11 GKLIVIEGTDSSGKETQTKKLFERLLNEKYNVKKISFPNYDSPACEPVKMYLAGKFGEDA 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---- 115 + ++++A R + E I++ DR++ S+ +Q + + Sbjct: 71 MKVNPYPVSMMYAIDRYASYKMDWEKFYQEDGIIVTDRYVTSNMVHQASKIIDETEKNVY 130 Query: 116 --FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +LD L+ + PD I L++P ++ LK ++ R + +D EK Sbjct: 131 LNWLDELEYDKMDIPRPDLVIFLNMPTEMALKLMEERNNKITGEQRKDIHERDAAYLEKS 190 Query: 174 RQIFLDIARNQPDR-CHIVDSAH--SFQSVATNILNIVWELV 212 +IA+ + D + + + +V ++ Sbjct: 191 HANACNIAKKYDWKEIKCTDGDRLKTIDEIGEEVYKLVRNII 232 >gi|156842253|ref|XP_001644495.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM 70294] gi|156115139|gb|EDO16637.1| hypothetical protein Kpol_529p17 [Vanderwaltozyma polyspora DSM 70294] Length = 217 Score = 125 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 84/226 (37%), Gaps = 29/226 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I EG++ GK+T +L L + + P + L+ Sbjct: 1 MSRGRLILIEGLDRTGKSTQCDILCEKLNG-----TLMKFPQRETKIGQLINNYLTDKSF 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++F+A R + + +I+ L G+ ++ DR++ S AY + + +D Sbjct: 56 KMPDQSIHLLFSANRWE-MSEIIQTELNNGRDVILDRYVYSGIAYSSAKH-ISGMDIDWC 113 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR----RQI 176 + + PD T+ L + RE + +E ++ + +I Sbjct: 114 YQCDKGLIRPDITVFLTND---------SNNDDREGFGEERYE--NIEFQKVVKLKFYEI 162 Query: 177 FLDI------ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKR 215 F + + I++ + + V IL + + K+ Sbjct: 163 FKKLDNLKEGEEAGENGLQIINVTNKNIDEVTGLILERIQPFLNKK 208 >gi|229365992|gb|ACQ57976.1| Thymidylate kinase [Anoplopoma fimbria] Length = 183 Score = 125 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 15/190 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L + LQ+ + R P T L D Sbjct: 4 KRGALIVLEGVDKAGKTTQCKKLVQALQQSGRPAEMMRFPDRTTTIGQLISAYLEKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + V +R L +G L+ DR+ S A+ + LD Sbjct: 63 LEDHTVHLLFSANRWELVPQ-MRKKLEQGITLVVDRYAFSGVAFTSAKQG---FCLDWCM 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD I L L +LR + + + +Q F + Sbjct: 119 KPDVGLPKPDLVIFLQLSPAEA--------TLRGQFGEERY--GTSVFQRAVQQRFEQLM 168 Query: 182 RNQPDRCHIV 191 + ++ Sbjct: 169 KEPSVNWQVI 178 >gi|19074200|ref|NP_584806.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1] gi|19068842|emb|CAD25310.1| THYMIDYLATE KINASE [Encephalitozoon cuniculi GB-M1] Length = 191 Score = 125 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 19/208 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G F+ FEG++ +GKTT + L L + P + L Sbjct: 1 MSKGKFVVFEGLDRSGKTTIVGSLYESLLPIVPTSKIRFPNRSGPVGKIIDGYL--QKKT 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +E ++F+A R +H ++ L I+LCDR+ S AY + L LD Sbjct: 59 NLESETIHLLFSADRYEH--RLMIEELRRDTIILCDRYSMSGIAYSVAKG----LSLDWC 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 PD TI +D+P+D +R + ++ V +K + + Sbjct: 113 IASEALLPKPDLTIFIDVPMDEICRRKGFGTEIHDT----------VPFLKKVLSAYQAL 162 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + +VD + V + + Sbjct: 163 LKKE-ENTLVVDGTLPVREVVEIVRKRI 189 >gi|48478173|ref|YP_023879.1| thymidylate kinase [Picrophilus torridus DSM 9790] gi|73920826|sp|Q6L016|KTHY_PICTO RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|48430821|gb|AAT43686.1| putative thymidylate kinase [Picrophilus torridus DSM 9790] Length = 202 Score = 125 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 49/219 (22%), Positives = 91/219 (41%), Gaps = 28/219 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N +FI+ EGI+G+GKTT + + ++TREP + ++ Sbjct: 4 NGSMFIAIEGIDGSGKTTLAGDIASY-----TGFYLTREPTDRFCYDYI-----EADYND 53 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118 + +F R H + I+ L+ G ++ DR++ SS AYQG + +D Sbjct: 54 ESSIINFFLFTLDRYMHQKE-IKNHLING--VISDRYVFSSIAYQGSGMEKRFKNMDETI 110 Query: 119 -SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + ++S +MPD I L + I LKR+ R + E D FER + + + + + Sbjct: 111 SWMLDVSRFIIMPDLIIYLKIDPGIALKRLNLRKN--EKKNTDAFER--LEMLKNVSKYY 166 Query: 178 LDIARNQPDRCHI----VDSAHSFQSVATNILNIVWELV 212 I I +++ + V + + + + Sbjct: 167 DYI---FSGIIKIPVIKINAEMEYNYVKDEAIKGLNDYL 202 >gi|148264685|ref|YP_001231391.1| thymidylate kinase [Geobacter uraniireducens Rf4] gi|146398185|gb|ABQ26818.1| thymidylate kinase [Geobacter uraniireducens Rf4] Length = 226 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 24/221 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I EG +G+G++T ++LLK +L+ + H T + G + + + + + Sbjct: 17 AGKLIVIEGADGSGRSTQMALLKDYLEGRG---HATVDVGLRRSTLVSEELQEAKQGNVL 73 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G ++ +A D +EN I PAL G I+L DR++ + A RD + D ++ Sbjct: 74 GEITRSLFYATDFADQLENRIIPALRAGFIVLADRYIYTLMA----RDIVRGADRDWVRS 129 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----------KDVMIHE 171 + ++PD I L + ++R + R++A LDY+E + ++ Sbjct: 130 LYGLALVPDLVIYLRVSPSQLVER-----NFRKNATLDYWEAGMDLGLSRDIFDSFIRYQ 184 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + Q + + + + V+ S SVA I V L+ Sbjct: 185 RLIQKEFTLMQQEYG-FNAVNGNRSICSVAGEITARVEGLM 224 >gi|37206|emb|CAA38528.1| thymidylate kinase [Homo sapiens] Length = 211 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 44/223 (19%), Positives = 87/223 (39%), Gaps = 20/223 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEAL-SRGPPPELLRFPERSTEIGKLLSSYLQKKSD- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 62 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK---ENFSLDWCK 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E + E+ + F + Sbjct: 118 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYE--NGAFQERALRCFHQLM 167 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ ++V + + + +K + L Sbjct: 168 KDTTLNWKMVDASKRLEAVHEELRVLSEDAIRTATEKPLGELW 210 >gi|45198887|ref|NP_985916.1| AFR369Wp [Ashbya gossypii ATCC 10895] gi|44984916|gb|AAS53740.1| AFR369Wp [Ashbya gossypii ATCC 10895] Length = 213 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 48/225 (21%), Positives = 82/225 (36%), Gaps = 21/225 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GK+T + +L LQ V + R P A L Sbjct: 1 MTRGRLILIEGLDRVGKSTQVGVLAERLQ---PHVQLMRFPARDTPVGALLDRYLRDRDF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + ++FAA R + I AL G+ ++ DR++ S AY + + + L+ Sbjct: 58 ELADQTAHLLFAANRWE-CAARIEAALAAGQHVILDRYVYSGAAYSAAK-AVPRMDLEWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 PD T+ L + + R + +E+ E+ R F + Sbjct: 116 AAADRGLPKPDLTLFL--------TQGAAAAAQRAGYGAERYEQ--PDFQERVRAQFERV 165 Query: 181 ARNQP-----DRCHIVD-SAHSFQSVATNILNIVWELVQKRVSPL 219 + + VD + S +VA I V + + + L Sbjct: 166 LAAEDAAYRAEHLVFVDVAGKSVAAVAGEIWAAVQQHLARDAGAL 210 >gi|156544086|ref|XP_001605460.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate kinase) [Nasonia vitripennis] Length = 209 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 17/213 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI EG++ AGK+T +S++ L+ +N V P + A + L+ ++ Sbjct: 1 MARGAFIVLEGLDRAGKSTQVSMIVEALKERNVPVERRVFPDRSTAIGGIINDYLAKKIE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA ++F+A R + ++ I L +G L+ DR+ S ++ L Sbjct: 61 -LAPEAVHLLFSANRWE-CKDGILETLEKGTTLIVDRYAASGA---AYSAATTGRPLSWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 PD + LD+ D R + + FER K + F + Sbjct: 116 TSPDQGLPAPDLVLYLDVTPDT--------QQQRSNWGEERFER--AETQRKVAENFRKL 165 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + V++ V +L V +L++ Sbjct: 166 S--ESGNWAFVEAGLDKLEVHQKLLQKVLDLLE 196 >gi|292670427|ref|ZP_06603853.1| thymidylate kinase [Selenomonas noxia ATCC 43541] gi|292647837|gb|EFF65809.1| thymidylate kinase [Selenomonas noxia ATCC 43541] Length = 225 Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 19/217 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 M G E +G+GK T +L L R+ V P + + L Sbjct: 3 MAKGKLFIIEAGDGSGKETQTRMLAERLVREGRRVVPVAFPDYEADSSMLVRMYLRGDFG 62 Query: 59 --VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---Q 113 D+ A A + FA R +G ++L DR+ S+ +Q + + Sbjct: 63 THADDVNAYAASTFFAVDRYASYRMKWGKDYEDGAVILADRYTTSNMVHQAVKIGDAAER 122 Query: 114 HLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L ++ + +PD LD+ + + + A D ER D Sbjct: 123 DAYLDWLYDLEFRKMGLPVPDAVFFLDMEP-CAADHLIAMRAKEKGAAPDIHER-DAAYL 180 Query: 171 EKRRQIFLDIARNQPDRCHIV----DSA-HSFQSVAT 202 E+ ++ +A + D A +++ Sbjct: 181 ERAHAAYVLLAERYG--WVRIPSSTDGAPLPIEAIHE 215 >gi|325990109|ref|YP_004249808.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis KI3806] gi|323575194|emb|CBZ40859.1| Thymidylate kinase (dTMP kinase) [Mycoplasma suis] Length = 218 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 30/226 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC- 57 +FI EG++ +GKTT I+ LK+ L K +H T EP G + L S Sbjct: 1 MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYGPEEFKEKFSELSSPI 60 Query: 58 --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E+++F A R +H+ I+P L E +L+CDR+ S+ AYQ Sbjct: 61 FSNSYSLSPVTESLLFLAIRAEHLRKFIKPKLEENSLLICDRYFLSTLAYQSHLKGVSCE 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +L S + + P+ I+++ + N+ ++ LD Sbjct: 121 WLSSNMKFISEGFSPNLVFIVNVSEEDWKTFTNNKRIKKQLNKLDCLSSS---------- 170 Query: 176 IFLDIARNQP----------DRCHIVDSAHSFQSVATNILNIVWEL 211 + +++ + + S S + A I+N + E+ Sbjct: 171 -YRELSEAYKWASEKLIELGENVINIPSTFSLEEKAQFIINKIVEI 215 >gi|253988332|ref|YP_003039688.1| thymidylate kinase-like protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779782|emb|CAQ82943.1| similarities with thymidylate kinase [Photorhabdus asymbiotica] Length = 223 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 21/228 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-----PGG--TPAAEAARHV 53 + GLFI+FEG +GAGK+T + L ++ + P G R V Sbjct: 2 IKRGLFIAFEGNDGAGKSTISREVYDILSLDYNNIVFLDKNYPLLPSGYSMYHMGKIRDV 61 Query: 54 LLSCGVD----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 L + E G ++ A+ +I+P+L++GKI++CD + A + Sbjct: 62 LWDYDISAPLGELGDRHWILLIASWFAVLDSLIIQPSLLQGKIIICDSWYYKYLARFLLK 121 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD-VM 168 + +S+ I+ PD I LD+P DI KR + ES L+ E+ D + Sbjct: 122 STELAELSNSVLSINT---KPDMVIYLDVPPDIAEKR-KKMLKPSESGKLEKNEKYDFIE 177 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVW-ELVQK 214 + + D I+D+ + +V ++I+ E+++K Sbjct: 178 YQKHVLNQYQTF---YDDTWKIIDTDTLTKDAVIKLTVDIIQGEILRK 222 >gi|303389072|ref|XP_003072769.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506] gi|303301911|gb|ADM11409.1| thymidylate kinase [Encephalitozoon intestinalis ATCC 50506] Length = 191 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 19/210 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G FI FEG++ +GKTT + L L DV R P + L ++ Sbjct: 1 MTQGKFIVFEGLDRSGKTTIVDSLYDSLSSMG-DVRKMRFPNRSGNIGKVIDAYLRKEIN 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+ R + + L + ILLCDR+ S +Y + L LD Sbjct: 60 -LENETIHLLFSGDRYEQKSTIEE--LRKSSILLCDRYSLSGASYSVAKG----LDLDWC 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD TI +D+P+D +R + D+ + EK + + Sbjct: 113 VMVDSGLPKPDMTIFIDIPLDE-----ISRRKGFGNEVHDH-----LPFLEKVLSAYKVL 162 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + + IVD S+ + + E Sbjct: 163 LKREKN-VLIVDGTFPISSIVEIVKRKILE 191 >gi|39998390|ref|NP_954341.1| hypothetical protein GSU3301 [Geobacter sulfurreducens PCA] gi|39985336|gb|AAR36691.1| conserved hypothetical protein [Geobacter sulfurreducens PCA] gi|298507331|gb|ADI86054.1| thymidylate kinase, putative [Geobacter sulfurreducens KN400] Length = 211 Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 93/226 (41%), Gaps = 29/226 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M G I EGI G+G+ + L L YDV P A E LL+ Sbjct: 1 MRKGKLIVIEGISGSGQ--QVKAGIVALHNTLVENKYDVVECANPDSGRAKELGITNLLN 58 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A+ + +A R + +NV+ PAL + KI+LC + SS A ++H Sbjct: 59 WPFGR-TPRADFLFESAVRTEVFKNVVEPALQQDKIVLCKQSSVSSLANAWVSGYTKHFD 117 Query: 117 ----LDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +D + + E+ PD TI +D+P +R+++ + +DY + Sbjct: 118 VLRHIDKISRGFLFEDEIFPDLTIFIDVPAQEAFERIEDVLQIHHEGGIDY--------Y 169 Query: 171 EKRRQIFLDIARNQPDRC--HIVDSAHS--FQSVATNILNIVWELV 212 + R+ +L + R +D++ + + I ++V +++ Sbjct: 170 NQMREFYLK----EISRWRGVRIDASAGRHPEIINAEIWDVVKKIL 211 >gi|156088733|ref|XP_001611773.1| thymidylate kinase [Babesia bovis T2Bo] gi|154799027|gb|EDO08205.1| thymidylate kinase, putative [Babesia bovis] Length = 237 Score = 124 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 86/205 (41%), Gaps = 16/205 (7%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 FEGI+ +GK+T + LL + L K D + + P L+ Sbjct: 18 FEGIDRSGKSTQVKLLSQKLTDKGIDHKLLKFPCYETECGKMLATHLASHGAVRSRRCIH 77 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 ++F+A R + ++ ++ L+ G ++ DR+ S AY ++ + + + + + Sbjct: 78 LLFSANRWEMMKEIV-ATLVSGTHIIVDRYAFSGVAYSVGAENLSYEWCITADD---GLL 133 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD + LD P + R + + +E++ + E R+++ + + + P Sbjct: 134 SPDLVVYLDNPAAVSAAR--------SNFGDERYEQEGKL--EAVRRVYEEFS-SLP-YW 181 Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213 H D+ + ++ I V ++Q Sbjct: 182 HKYDATLPQEVLSKAIYERVASVLQ 206 >gi|210623262|ref|ZP_03293679.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275] gi|210153663|gb|EEA84669.1| hypothetical protein CLOHIR_01629 [Clostridium hiranonis DSM 13275] Length = 227 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 80/227 (35%), Gaps = 18/227 (7%) Query: 1 MNSGLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG- 58 MN G I E G + +GK T L + L Y+V P + + L Sbjct: 4 MN-GKLIIIESGSDASGKATQSEELLKKLTADGYNVRKVEYPNYKSESSTLVKMYLRGDF 62 Query: 59 ---VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQ 113 D+ A + F A R + G I++ DR+ S+ +Q + + Sbjct: 63 GKHADDVDAYIASTFFTADRYASFKTEWEEFYRSGGIVIADRYTTSNMVHQASKMEIEER 122 Query: 114 HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD L++ PD I L++PVD +K ++NR + D Sbjct: 123 DKYLDWLEDYEYNLFKIPRPDEVIFLNVPVDYSIKLMENRKNKFTGEEEKDIHESDKNYL 182 Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 K L IA V+ + + ++ I IV ++ Sbjct: 183 RKTYNNSLYIADKY--NWKRVECVENEQLRTIEDISNEIYEIVKNIL 227 >gi|325973666|ref|YP_004250730.1| thymidylate kinase [Mycoplasma suis str. Illinois] gi|323652268|gb|ADX98350.1| thymidylate kinase [Mycoplasma suis str. Illinois] Length = 218 Score = 124 bits (312), Expect = 9e-27, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 89/226 (39%), Gaps = 30/226 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSC- 57 +FI EG++ +GKTT I+ LK+ L K +H T EP G + L S Sbjct: 1 MFIVIEGMDNSGKTTLINYLKKSLLNNPLIFEKFSKIHFTSEPYGPEEFKEKFSELSSPI 60 Query: 58 --GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E+++F A R +H++ I+P L E +L+CDR+ S+ AYQ Sbjct: 61 FSNSYSLSPVTESLLFLAIRAEHLKTFIKPKLEENSLLICDRYFLSTLAYQSYLKGVSCE 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +L S + + P+ I+++ + N+ ++ LD Sbjct: 121 WLSSNMKFISEGFSPNLVFIVNVSEEDWKTFTNNKRIKKQLNKLDCLSSS---------- 170 Query: 176 IFLDIARNQP----------DRCHIVDSAHSFQSVATNILNIVWEL 211 + +++ + + S S + I+N + E+ Sbjct: 171 -YRELSEAYKWASEKLIELGENVINIPSTFSLEEKVQFIINKIVEI 215 >gi|290558930|gb|EFD92317.1| thymidylate kinase [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 202 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 77/207 (37%), Gaps = 10/207 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EGI+GAGK T LLK L+ V P + A L + + Sbjct: 3 GKIIVIEGIDGAGKATQSKLLKEKLESNGITVSSYSYPDYSSVYGARIKSFLYKEI-KIK 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + +++ + E +I L G ++ DRF S+ AYQ ++ Sbjct: 62 VDELFMLYLIDMVKDREKMINE-LKSGNYIIIDRFFFSTIAYQSAGGFDYDNCKKIIKLF 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +P+ T +D+PVD+ + R + + + +D FE V + + + Sbjct: 121 --DMPVPEITFFIDVPVDVSMSRKEKQ---KGKLDVDKFESNKV-FLQNVSLYYKKLMEE 174 Query: 184 --QPDRCHIVDSAHSFQSVATNILNIV 208 + +D + + I+ + Sbjct: 175 NFYSKKWKRIDGNLKIEEINDLIIKSI 201 >gi|289676128|ref|ZP_06497018.1| thymidylate kinase [Pseudomonas syringae pv. syringae FF5] Length = 225 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 81/198 (40%), Gaps = 11/198 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCG---V 59 G I EGI+G+GK T + + + P G L+ + Sbjct: 2 GKIIVVEGIDGSGKNTQTDKMLKAFLSSGVEASKISFPQYGKTFFAKEVASYLNGEFGSI 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114 ++ + A+++A R + E ++ + +L+CDR++ S+ A+Q + + Sbjct: 62 EQISPKLSAMLYAGDRFECKEEIVNKS-TRDSVLICDRYVYSNVAHQIAKVSDEDRNELR 120 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++++L+ + PD TI LD+P + + + + + +D K Sbjct: 121 EWIEALEFDVYKLPRPDLTIFLDVPPKVSSDLIFRKDARNYTDKKKDLHEEDDSYLLKVY 180 Query: 175 QIFLDIARNQPDRCHIVD 192 +IF D+A + D ++ Sbjct: 181 KIFKDMAVREND-WVAIN 197 >gi|225020669|ref|ZP_03709861.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii ATCC 33806] gi|305680065|ref|ZP_07402875.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266] gi|224946615|gb|EEG27824.1| hypothetical protein CORMATOL_00676 [Corynebacterium matruchotii ATCC 33806] gi|305660685|gb|EFM50182.1| dTMP kinase [Corynebacterium matruchotii ATCC 14266] Length = 208 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 84/213 (39%), Gaps = 9/213 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I+ EGI+GAGKTT ++ L+ L + R A R + G Sbjct: 1 MIENMIIAIEGIDGAGKTTLLATLREQLHAEVIA--FPRYETSIHAQLVRRALYQQMGDL 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A A +FA R + ++ P + +++ DR++ S+ AY + +D + Sbjct: 59 TDSVYAMATLFALDRHE-ARELLHPFVASNALVVLDRYVASNAAYSWA-RTGDETIIDWV 116 Query: 121 QEI---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 E+ ++ PD + L+ D+ +R NR L D +E D + ++ + Sbjct: 117 AELEFNTLGVPRPDLQVFLNTTPDVAGQRAINREKLDRDRARDSYES-DRALQQRTADAY 175 Query: 178 LDIARNQPDR-CHIVDSAHSFQSVATNILNIVW 209 + +V+ + VA I + Sbjct: 176 GQLVAQNWQSPWLVVEPEADYLHVADRITAALQ 208 >gi|257076424|ref|ZP_05570785.1| thymidylate kinase [Ferroplasma acidarmanus fer1] Length = 206 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 26/221 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EGI+G+GKTT ++ L++ ++H TREP + + F + Sbjct: 1 MFITIEGIDGSGKTTLVNSLRKIFD----NIHFTREPTDKFQLANLKTL-----STPFNS 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERD----SSQHLFLDS 119 +F RL+H + + G K ++CDR+L SS AY+G + + Sbjct: 52 FYNFFLFTYDRLEHQDEI------NGFKNVICDRYLASSIAYEGPMIEELFGDKKETVLW 105 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQN-RYSLR-ESACLDYF-ERKDVMIHEKRRQI 176 + E+S +PD I LD +D+ L+R++N R +L L E++ + + + Sbjct: 106 MLEVSKMLKLPDMIIYLDAHLDVALERIRNSRKNLNFRGKQLSILEEKEGLKAIQDYYEY 165 Query: 177 FL---DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 FL ++ + + +++ + V NI+ + ++K Sbjct: 166 FLGNIEMFTKKQIKIERINANSPMEDVLYKAKNIINKTIEK 206 >gi|261885334|ref|ZP_06009373.1| thymidylate kinase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 193 Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++FEG++G GK+T ISLLK F D +T+EPGGT R LL + Sbjct: 1 MLVNFEGVDGVGKSTQISLLKEFRN----DAVITKEPGGTEFGLMVRDYLLK-NASKISN 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI 123 + E +F A R +H E V++P ++L DR S AY D S L L + Sbjct: 56 KTEIFLFLADRAEHYEKVLKPNYAN--LVLNDRSFVSGMAYAMANDSSLDIGLLLDLNKF 113 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + D + L + R+ +R + E E + + + Q F+ I Sbjct: 114 ALNGDLGDKFVFLKADEILLRNRLFSRGTSDE------IEMRGIEYLMRV-QGFMSII 164 >gi|257126449|ref|YP_003164563.1| thymidylate kinase [Leptotrichia buccalis C-1013-b] gi|257050388|gb|ACV39572.1| thymidylate kinase [Leptotrichia buccalis C-1013-b] Length = 225 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 19/181 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR-KNYD-VHVTREPGGTPAAEAARHVLLSCG--- 58 G I EG +G+GK T LL + L+ K + V P A + L+ Sbjct: 2 GKLIIIEGTDGSGKQTQTELLYKKLKEIKGEEKVKKISFPNYESRASEPVKMYLAGEFGK 61 Query: 59 -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-- 115 + A A +++++ R + G I++ DR+ S+ +Q + + Sbjct: 62 TAESVNAYAASVLYSIDRFASFKTEWEEFYNNGGIVISDRYTISNMIHQVPKILDEKEKE 121 Query: 116 -FLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 +L+ L ++ + PD LD+P + K ++NR + K IHE Sbjct: 122 KYLEWLVDLEWGKIGIPKPDIVFFLDIPFEFSQKLMKNRENKITGG-------KKKDIHE 174 Query: 172 K 172 K Sbjct: 175 K 175 >gi|170032238|ref|XP_001843989.1| thymidylate kinase [Culex quinquefasciatus] gi|167872105|gb|EDS35488.1| thymidylate kinase [Culex quinquefasciatus] Length = 210 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 67/207 (32%), Gaps = 18/207 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG + AGKTT + L + P + + L+ D Sbjct: 6 KRGALIVLEGCDRAGKTTQCKRIVEHLTQSGRKAKFMNFPDRSTDCGKLINSYLTNK-DN 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F E ++F R + + L +G L+ DR+ S A+ + L ++ + Sbjct: 65 FTDEGIHLLFTLNRWE-ARKQMEQLLQDGTTLIVDRYSYSGVAFSSAKG----LDMEWCK 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD I+L L + KR + +E + F ++ Sbjct: 120 APEAGLLKPDLVILLTLTAEALAKR--------GGFGEERYE--VPEFQRRVMGKFAEL- 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 +D+ + + +V Sbjct: 169 -RDDTYWRQIDADKGQDELTVELSELV 194 >gi|326469002|gb|EGD93011.1| thymidylate kinase [Trichophyton tonsurans CBS 112818] Length = 182 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 13/179 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G + EG++ AGK+T + L +FL + ++ R P T A + L G + Sbjct: 11 RRGALVVVEGLDRAGKSTQCARLHQFLVNQGHETKYIRFPDRTTAIGKMINQYL-RGEIQ 69 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + IR + G ++ DR+ S Y +++ + LD Sbjct: 70 LDDHAVHLLFSANRWEAAAQ-IRRDIESGITVIVDRYSYSGAVYSAAKENKELQ-LDWAW 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 V PD L++ ++ R + +E V + +K ++FL + Sbjct: 128 RPEVGLPRPDIWFFLNISTEVAAAR--------GGYGTERYE--TVNLQKKVGKLFLSL 176 >gi|157817466|ref|NP_001100395.1| thymidylate kinase [Rattus norvegicus] gi|149037469|gb|EDL91900.1| deoxythymidylate kinase (predicted), isoform CRA_b [Rattus norvegicus] Length = 212 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 81/212 (38%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L L + + R P + L + Sbjct: 4 RRGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ + ++ LD + Sbjct: 63 LEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTSAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + + L+ + R L+ +E E+ F + Sbjct: 119 QPDVGLPKPD--------LILFLQLQLLDAASRGEFGLERYE--TGTFQEQVLLCFQQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +VD++ S + V I + + +Q Sbjct: 169 SEKNLNWKVVDASKSIEDVHEEIRALSEDAIQ 200 >gi|51599045|ref|YP_073233.1| thymidylate kinase [Borrelia garinii PBi] gi|51573616|gb|AAU07641.1| thymidylate kinase [Borrelia garinii PBi] Length = 202 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 86/211 (40%), Gaps = 20/211 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP + + L++ Sbjct: 8 FYCIEGIDGSGKTSISNKLKTLCNDESR-YYFTKEPSNGIIGKMIKEQLMNFKN-PLKES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L K ++ DR+L SS AYQG E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIKTDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +++ +S + ++ L++ Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLIK 201 >gi|257470873|ref|ZP_05634963.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185] gi|317065075|ref|ZP_07929560.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185] gi|313690751|gb|EFS27586.1| thymidylate kinase [Fusobacterium ulcerans ATCC 49185] Length = 223 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 81/222 (36%), Gaps = 13/222 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T L L + Y+V P A + L+ Sbjct: 2 GKLIVIEGTDSSGKETQTKKLFERLLAEKYNVKKISFPNYDSPACEPVKMYLAGKFGEDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---F 116 + ++++A R + E I++ DR++ S+ +Q + +++ + Sbjct: 62 MKVNPYPVSMMYAIDRYASYKMDWEKFYKEEGIIVTDRYVTSNMVHQASKIATEDEKSVY 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 LD L E+ + PD I L++P ++ LK ++ R + +D EK Sbjct: 122 LDWLDELEYDKMDIPRPDLIIFLNMPTEMALKLMEERNNKITGEQKKDIHERDAAYLEKS 181 Query: 174 RQIFLDIARNQPDR-CHIVDSAH--SFQSVATNILNIVWELV 212 IA + D + + + +V ++ Sbjct: 182 HANACSIAEKYGWKEIKCTDGDRLKTIDEIGEEVYKLVRNII 223 >gi|225711618|gb|ACO11655.1| Thymidylate kinase [Caligus rogercresseyi] Length = 216 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 21/177 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G FI EG + +GKTT L ++ R P +P + + L+ G Sbjct: 7 KRGAFIVLEGCDRSGKTTIAKRLSD---SPGFE--FFRFPDRDSPLTGSLINSFLTGGT- 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ ++F+A R + V +++ L GK ++CDR+ S AY + D Sbjct: 61 PMSSQLIHLLFSANRWEKVPSMLSV-LSAGKNIICDRYAYSGIAYSSSKPGMDF---DWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 PD I LD+ + LKR + +E+ K R I+ Sbjct: 117 AGPDNGLPTPDLVIFLDVSPEQALKR--------GGFGEEVYEKVG--FQAKVRDIY 163 >gi|157785665|ref|NP_001099137.1| thymidylate kinase isoform 1 [Mus musculus] gi|193806346|sp|P97930|KTHY_MOUSE RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|20987342|gb|AAH30178.1| Dtymk protein [Mus musculus] gi|148707983|gb|EDL39930.1| deoxythymidylate kinase, isoform CRA_a [Mus musculus] Length = 212 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 82/212 (38%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L L + + R P + + L + Sbjct: 4 RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 LEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + + L+ + R L+ +E ++ F + Sbjct: 119 QPDVGLPKPD--------LILFLQLQLLDAAARGEFGLERYE--TGTFQKQVLLCFQQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +VD++ S + V I + ++ Sbjct: 169 EEKNLNWKVVDASKSIEEVHKEIRAHSEDAIR 200 >gi|226305654|ref|YP_002765614.1| thymidylate kinase [Rhodococcus erythropolis PR4] gi|226184771|dbj|BAH32875.1| putative thymidylate kinase [Rhodococcus erythropolis PR4] Length = 213 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL-SCGVD 60 G ++ EG++GAGK T I ++ L+R + P G + A+ A L S G Sbjct: 2 GTLVALEGLDGAGKRTLIGKVETELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R + I L I+L DR++ S+ AY R + Sbjct: 62 AESVNAMAVLFALDRAGAADR-ISELLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120 Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++E+ + + PD + LD+PV + +R ++R + S LD +ER D + + + Sbjct: 121 WIRELELGRLALPAPDLQLYLDVPVALAEQRARSREAQDASRQLDAYER-DGGLQARTGE 179 Query: 176 IFLDIARNQ 184 ++ +A Sbjct: 180 LYKQLAATN 188 >gi|33563101|dbj|BAA31455.1| Thimidylate Kinase [Phytoplasma sp.] Length = 209 Score = 122 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 88/211 (41%), Gaps = 20/211 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I L+ L+ + + G + + R + L+ + Sbjct: 3 KLIVFEGLDGSGKTSLIHTLQPQLKT---PHQLYQGLGSSSIGKEIRDLFLN--FQQVDY 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLDSLQ 121 + A + + ++++ DR+L S+YAYQ ++ Q L + Sbjct: 58 LTRFYLSLANMAQIQAELFK----NNQLIILDRWLPSAYAYQLFPFSKEKKQLPPLKKIF 113 Query: 122 EISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +++ + + PD I LD+ IG R + + + + D ER+ + + RQ + Sbjct: 114 KLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERQSLTYFQTVRQGYNH 169 Query: 180 IARNQPDRC--HIVDSAHSFQSVATNILNIV 208 + I++ + S +S I+ + Sbjct: 170 YLTHYTSGVNKLILNGSDSIKSNVKQIIKQI 200 >gi|255624824|ref|XP_002540531.1| Thymidylate kinase, putative [Ricinus communis] gi|223495133|gb|EEF21852.1| Thymidylate kinase, putative [Ricinus communis] Length = 127 Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats. Identities = 46/114 (40%), Positives = 73/114 (64%), Gaps = 2/114 (1%) Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 +DSS YQG + + F+++LQ ++V V+PDCT+ILD+P +IGL+ + R +A Sbjct: 1 MDSSRVYQGVTGNLEPDFIEALQRVAVNGVVPDCTLILDIPAEIGLE--RARRRASAAAA 58 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 D FE++++ HEKRR+ FLDIA P RCH++D+ ++A I I+ E + Sbjct: 59 PDRFEKEEMQTHEKRREAFLDIAARDPGRCHVIDAQRPEDAIADEIAGIIEERL 112 >gi|197294494|ref|YP_001799035.1| Thymidylate kinase [Candidatus Phytoplasma australiense] gi|171853821|emb|CAM11765.1| Thymidylate kinase [Candidatus Phytoplasma australiense] Length = 195 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 82/188 (43%), Gaps = 14/188 (7%) Query: 33 YDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI 92 + G + + R++ L + + + ++ A L + +I PAL+ G + Sbjct: 6 IKSKFFQGLGSSIVGKEIRNLFLHQS--KISPKTKYLLSLANMLQTQDELIFPALLSGYL 63 Query: 93 LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 +L DR+ S++AYQ + + + + + I+ + P T LD+ IG++R QN+ + Sbjct: 64 VLVDRWYGSTFAYQSKGNYIDYDDKITSKIINHFLIKPKLTFYLDIDPKIGIQRKQNQTN 123 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDI------ARNQPDRC--HIVDSAHSFQSVATNI 204 + LD ERK + E R+ +L+ A C ++++ S + Sbjct: 124 HK----LDLIERKPLNYFENVRKHYLNQHKYCNDANCNHKNCNHFLINATKSQKDNLEQT 179 Query: 205 LNIVWELV 212 I+ + + Sbjct: 180 TQILIKKI 187 >gi|330839887|ref|YP_004414467.1| Thymidylate kinase [Selenomonas sputigena ATCC 35185] gi|329747651|gb|AEC01008.1| Thymidylate kinase [Selenomonas sputigena ATCC 35185] Length = 224 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 82/223 (36%), Gaps = 15/223 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G + E +G+GK T +L+ L + V P + A + L Sbjct: 4 KGKLLVLEAGDGSGKATQTKMLRERLVAEGRCVRQVEFPDYASPSSALVRMYLGGDFGER 63 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 E A A + FA R + R L G I+L DR+ ++ +Q + + + Sbjct: 64 ASEVNAYAASAFFAVDRYASFQTKWRADLEAGAIVLADRYTTANMVHQAVKLEEAAEREA 123 Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FL L++ ++ PD + LD+ + + + + A D ER D + Sbjct: 124 FLAWLEDFEYGKLALPRPDLVLFLDMDPAVSRR-LIAARAAASGAARDIHER-DEGYLVR 181 Query: 173 RRQIFLDIARNQP-DRCHIVDSAHSF--QSVATNILNIVWELV 212 + +++A R ++ ++V I V ++ Sbjct: 182 CHRASVNLAARCGWQRVRCSEAGEPLSREAVHEKIYEAVRRIL 224 >gi|950071|emb|CAA83746.1| ATP-bind. pyrimidine kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 98 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 41/99 (41%), Positives = 63/99 (63%), Gaps = 4/99 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+FEG++G+GKTT + +K L+R NY V +TREPGG AE R ++L + A Sbjct: 1 MFITFEGMDGSGKTTALLKVKEELERLNYKVLITREPGGEVIAEQIRQIILDNKNKDMDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 EA++F A+R H++ VI+PAL + ++C + S Y Sbjct: 61 WTEALLFIASRNQHLQKVIKPALEKN--IIC--YFRSLY 95 >gi|229489508|ref|ZP_04383371.1| thymidylate kinase [Rhodococcus erythropolis SK121] gi|229323605|gb|EEN89363.1| thymidylate kinase [Rhodococcus erythropolis SK121] Length = 213 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL-SCGVD 60 G ++ EG++GAGK T I ++ L+R + P G + A+ A L S G Sbjct: 2 GTLVALEGLDGAGKRTLIGKVESELRRGGTSIATLDFPRYGKSIHADLAAEALKGSHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R + I L I+L DR++ S+ AY R + Sbjct: 62 AESVNAMAVLFALDRAGAADR-ISDLLSANDIVLLDRYVASNAAYNAARVHQGVDGEMVA 120 Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++E+ + + PD + LD+PV + +R ++R + S LD +ER D + + + Sbjct: 121 WVRELELGRLALPAPDLQLYLDVPVALAEQRARSREAEDASRQLDAYER-DGGLQARTGE 179 Query: 176 IFLDIARNQ 184 ++ +A Sbjct: 180 LYKQLAATD 188 >gi|260888711|ref|ZP_05899974.1| dTMP kinase [Selenomonas sputigena ATCC 35185] gi|260861580|gb|EEX76080.1| dTMP kinase [Selenomonas sputigena ATCC 35185] Length = 230 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 82/223 (36%), Gaps = 15/223 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G + E +G+GK T +L+ L + V P + A + L Sbjct: 10 KGKLLVLEAGDGSGKATQTKMLRERLVAEGRCVRQVEFPDYASPSSALVRMYLGGDFGER 69 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 E A A + FA R + R L G I+L DR+ ++ +Q + + + Sbjct: 70 ASEVNAYAASAFFAVDRYASFQTKWRADLEAGAIVLADRYTTANMVHQAVKLEEAAEREA 129 Query: 116 FLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FL L++ ++ PD + LD+ + + + + A D ER D + Sbjct: 130 FLAWLEDFEYGKLALPRPDLVLFLDMDPAVSRR-LIAARAAASGAARDIHER-DEGYLVR 187 Query: 173 RRQIFLDIARNQP-DRCHIVDSAHSF--QSVATNILNIVWELV 212 + +++A R ++ ++V I V ++ Sbjct: 188 CHRASVNLAARCGWQRVRCSEAGEPLSREAVHEKIYEAVRRIL 230 >gi|219685925|ref|ZP_03540727.1| dTMP kinase [Borrelia garinii Far04] gi|219672537|gb|EED29574.1| dTMP kinase [Borrelia garinii Far04] Length = 202 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 20/211 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP + + L++ Sbjct: 8 FYCIEGIDGSGKTSITNKLKTLCNDESR-YYFTKEPSNGIIGKMIKEQLMNFEN-PLKES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L K ++ DR+L SS AYQG E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDIFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +++ +S + ++ L++ Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLIK 201 >gi|78224441|ref|YP_386188.1| thymidylate kinase [Geobacter metallireducens GS-15] gi|78195696|gb|ABB33463.1| thymidylate kinase [Geobacter metallireducens GS-15] Length = 211 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 29/226 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISL----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M G I EGI G+G+ + L + L YDV P A E LL+ Sbjct: 1 MRKGKLIVIEGISGSGQ--QVKAAIVGLHKALTGMKYDVVECANPDSGRAKELGIDNLLN 58 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-L 115 A+ + AA R + +N++ PAL + KI+LC + SS A ++H Sbjct: 59 WPFGR-TPRADFMFEAAVRTEVFKNIVEPALQDDKIVLCKQSSISSLANAWVSGYTKHFD 117 Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L ++++S + PD T+ +D+P +R+++ + ++Y+E Sbjct: 118 VLRHIEKLSRGFLFEDEIYPDLTLFIDVPAQEAFERIEDVLQIHHEGGIEYYE------- 170 Query: 171 EKRRQIFLDIARNQPDRCH----IVDSAHSFQSVATNILNIVWELV 212 K R+ +L + R H + S + + +I V ++ Sbjct: 171 -KMREFYLK----EISRWHGASIAAGADRSEEEINADIWAKVQTIL 211 >gi|325680793|ref|ZP_08160331.1| dTMP kinase [Ruminococcus albus 8] gi|324107573|gb|EGC01851.1| dTMP kinase [Ruminococcus albus 8] Length = 217 Score = 121 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 48/217 (22%), Positives = 90/217 (41%), Gaps = 18/217 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DE 61 I EG++G+GK+T L +L+ K+ + P + + L+ + + Sbjct: 4 LIVLEGLDGSGKSTQFEKLTEYLKGKDVKLKAISFPDYNDPSSTLVQMYLNGEIAGSAEA 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--LDS 119 A A + +AA R + EG ++L R++ S+ YQ + + L+ Sbjct: 64 VNAYAASSFYAADRYVSYKKYWEKDHAEGSLILAARYVTSNCIYQMTKLPEEQWESYLEW 123 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L++ + P I LD+P++I K + RY ES D E+ ++ K R Sbjct: 124 LEDYEYEKLGLPKPTKVIFLDMPIEISQKLLSARYDGDESKK-DIHEK-NIEFLYKCRSA 181 Query: 177 FLDIARNQPDRCHIVDSAH-----SFQSVATNILNIV 208 L A+ Q HI++ S + + I+ ++ Sbjct: 182 ALFTAKRQG--WHIIECGRDGEPLSIEEIFGKIIELI 216 >gi|310659451|ref|YP_003937172.1| thymidylate kinase [Clostridium sticklandii DSM 519] gi|308826229|emb|CBH22267.1| putative thymidylate kinase [Clostridium sticklandii] Length = 231 Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 18/226 (7%) Query: 4 GLFISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G E G + +GK T LL L+ Y+V P + A + L Sbjct: 2 GRLFVVESGSDASGKATQTELLYNKLKMDGYNVRKIEFPNYKSESSALVKMYLRGDFGSK 61 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHL 115 ++ + +A R + G I++ DR+ S+ +Q + + + Sbjct: 62 PEDVNPYITSTFYAVDRYASFKTSWEEFYNNGGIIIADRYTTSNMVHQAAKYDDYNDKDK 121 Query: 116 FLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FL L E P L++PV+ K ++NR + + EK Sbjct: 122 FLQWLDEYEFDFYGLPRPTKVFFLNMPVEFSFKLMKNRKNKITGNVKKDIHEANKDYLEK 181 Query: 173 RRQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + L +A+ +D + + I +++ + ++ Sbjct: 182 SYENALYVAKKYG--WENIDCTSDDKLRQIKDIHEEIYSLILKSLK 225 >gi|219684919|ref|ZP_03539860.1| thymidylate kinase [Borrelia garinii PBr] gi|219671657|gb|EED28713.1| thymidylate kinase [Borrelia garinii PBr] Length = 202 Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 87/211 (41%), Gaps = 20/211 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP + + L++ Sbjct: 8 FYCIEGIDGSGKTSITNKLKTLCNDESR-YYFTKEPSNGIIGKMIKEQLMNFEN-PLKES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L K ++ DR+L SS AYQG E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKTKKIITDRYLFSSIAYQGNLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +++ +S + ++ L++ Sbjct: 171 ELEKKINVIYINNSIKDNLDETAKKIFNLIK 201 >gi|119113986|ref|XP_314179.3| AGAP005260-PA [Anopheles gambiae str. PEST] gi|116128380|gb|EAA09514.4| AGAP005260-PA [Anopheles gambiae str. PEST] Length = 211 Score = 121 bits (304), Expect = 7e-26, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 18/212 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG + GKTT L L + N P + + L+ D+ Sbjct: 7 KRGAFIVLEGCDRTGKTTQCKTLVDKLMQVNIRAQYMNFPDRSTQCGQLINGYLTRK-DD 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F E ++F R + ++ + L G L+ DR+ S A+ + L ++ + Sbjct: 66 FTDEGIHLLFTLNRWERMKE-MEKLLKAGVNLIVDRYSYSGVAFSSAKG----LDMEWCK 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD I+L L +D L R R + +E +K + + + Sbjct: 121 APESGLLKPDLVILLTLSMD-ALAR-------RGGFGDERYEVAG--FQKKVIERYGML- 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +D+ +F V + V ++ Sbjct: 170 -KDDRYWKAIDADKTFDDVTAVLYEEVLRAIE 200 >gi|26353426|dbj|BAC40343.1| unnamed protein product [Mus musculus] Length = 212 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 81/212 (38%), Gaps = 15/212 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L L + + R P + + L + Sbjct: 4 RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD + Sbjct: 63 LEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTGAK---ENFSLDWCK 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + + L+ + R L+ + ++ F + Sbjct: 119 QPDVGLPKPD--------LILFLQLQLLDAAARGEFGLER--NETGTFQKQVLLCFQQLM 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +VD++ S + V I + ++ Sbjct: 169 EEKNLNWKVVDASKSIEEVHKEIRAHSEDAIR 200 >gi|72078995|ref|XP_784160.1| PREDICTED: similar to thymidylate kinase, partial [Strongylocentrotus purpuratus] gi|115729707|ref|XP_001201706.1| PREDICTED: similar to thymidylate kinase, partial [Strongylocentrotus purpuratus] Length = 171 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 15/184 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G + FEG + +GK+T L + K + R P + L D Sbjct: 1 MRRGALVVFEGCDRSGKSTQCKKLVESMLEKGMKAELMRFPERSTVIGKLIDSYLKNSKD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F+A R + ++ + L EG L+ DR+ S A+ ++ L+ Sbjct: 61 -VQDNAIHLLFSANRWE-LKPEMERKLNEGVTLVVDRYAYSGVAFTAAKEGIS---LNWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V +PD + L + + KR + +E+ I + + F + Sbjct: 116 KRPDVGLPLPDLVLFLKVSSEAAEKR--------GGFGEERYEK--SEIQARVAKNFEKL 165 Query: 181 ARNQ 184 N Sbjct: 166 QEND 169 >gi|54026585|ref|YP_120827.1| thymidylate kinase [Nocardia farcinica IFM 10152] gi|54018093|dbj|BAD59463.1| putative thymidylate kinase [Nocardia farcinica IFM 10152] Length = 215 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61 GL I+ EG++GAGK T + L + P G + A+ A L D Sbjct: 2 GLLIALEGLDGAGKRTLTDAVVAALGARGVRAATLGFPRYGRSVHADLAAEALHGAHGDL 61 Query: 62 FGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 + A A++FA R + + + + AL + I++ DR++ S+ AY R S+ + Sbjct: 62 ASSVYAMALLFALDRAEARDELSK-ALADNDIVILDRYVASNAAYNAARLHQSATGEIVG 120 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ PD ++LD+ ++ +R + R L LD +ER D + + Sbjct: 121 WTADLEFGRFGLPEPDVQLLLDVDTEVAAERARRRTELDADRPLDAYER-DGGLQRRTLA 179 Query: 176 IFLDIARNQ 184 ++ ++A Sbjct: 180 VYRELAERN 188 >gi|224533463|ref|ZP_03674056.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a] gi|224513425|gb|EEF83783.1| thymidylate kinase [Borrelia burgdorferi CA-11.2a] Length = 202 Score = 120 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + TREP E R L++ Sbjct: 8 FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTREPSSGIIGEMIRKQLMNFEN-PLEES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209 + +++ +S A I N++ Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201 >gi|328776703|ref|XP_624530.3| PREDICTED: thymidylate kinase-like [Apis mellifera] Length = 214 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 80/213 (37%), Gaps = 18/213 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G I EG + AGK+T +L L N V + P T + L+ + Sbjct: 3 IRRGALIVLEGCDRAGKSTQAKMLITALNNLNIPVELHSFPNRTTTIGEIINNFLTKKTE 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+A R + ++ I L +G L+ DR+ S ++ L+ Sbjct: 63 -LPPETIHLLFSANRWE-CKDEILKTLYKGTTLIIDRYAASGA---AYTAATTGKNLNWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +E PD I L + + SLR + + FE +V E + + Sbjct: 118 REPDSGLPSPDLVIYLSIS--------KKSQSLRSNWGDERFE--NVEFQELVASNYEKL 167 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 +++++ + + IL V + ++ Sbjct: 168 IDK---TWYVINADDDKSVIHSQILEKVIDTIK 197 >gi|225376152|ref|ZP_03753373.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM 16841] gi|225211979|gb|EEG94333.1| hypothetical protein ROSEINA2194_01789 [Roseburia inulinivorans DSM 16841] Length = 206 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 16/168 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G FI+ +G G GK+T I +K L+ Y V++TREP T R ++ Sbjct: 9 GYFIAVDGPNGVGKSTLIEAIKNKLEVLGYAVYITREPTDTKLGNYLREF-----AEKHS 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A + AA R +H+ N I PAL EG++++ DR++ SS Q S L + EI Sbjct: 64 GISLACLVAADRYEHMTNEIIPALEEGQLVISDRYILSSLILQEMDGVSATFVLTANSEI 123 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-------SACLDYFER 164 + PD + + + KR+ R +L + LD+ ER Sbjct: 124 ----IKPDLQLAVFADERVLQKRLSERDTLTRFEKGNQSKSELDFMER 167 >gi|41409459|ref|NP_962295.1| thymidylate kinase [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398290|gb|AAS05911.1| Tmk [Mycobacterium avium subsp. paratuberculosis K-10] Length = 210 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T L++ + V P G + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60 Query: 63 GA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 + A A++FA R V + I + +++ DR++ S+ AY R + + Sbjct: 61 SSVYAMAMLFALDRAAAVGD-IEGLRRDHDVVIMDRYVASNAAYTAARLHQDADGPAVAW 119 Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + PD ++L + ++ +R ++R D +ER D + ++ + Sbjct: 120 VHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYER-DDGLQQRTGAV 178 Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206 + +A +VD+ +A ++ Sbjct: 179 YAQLAAAGWGGAWRVVDADVDPARLAADLAA 209 >gi|242238410|ref|YP_002986591.1| thymidylate kinase [Dickeya dadantii Ech703] gi|242130467|gb|ACS84769.1| thymidylate kinase [Dickeya dadantii Ech703] Length = 223 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 28/231 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTREPGGTPAAEAARH 52 N G FI+FEG +GAGK+T + KN+ V + G R Sbjct: 3 NKGFFIAFEGNDGAGKSTVSRDIYDSIVTIYPNTTFLDKNHPVLESGY--GMYHMGKIRE 60 Query: 53 VLLSCGV----DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 +L + DE G ++ ++ +I+PAL EGKI++ D + A Sbjct: 61 ILWDYDISAPLDELGDSHWLLLLSSWFAALDYGIIKPALNEGKIIISDGWFYKYIARFSL 120 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + + + E+ PD TI LD+ + R + ES L+ K++ Sbjct: 121 K---NDIMRNIANEVFNLSTEPDLTIYLDVTPRVAATRKET-LKPSESGMLE--NDKNLN 174 Query: 169 I---HEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKR 215 + R+ + ++ D+ +++ S + + +I+ I+ ++K+ Sbjct: 175 FSSYQQLVREQY---SKFFNDKWIHMNTTDLSPEYLKVHIIEIIKSNLEKQ 222 >gi|225549383|ref|ZP_03770355.1| thymidylate kinase [Borrelia burgdorferi 94a] gi|225370011|gb|EEG99452.1| thymidylate kinase [Borrelia burgdorferi 94a] gi|312149482|gb|ADQ29553.1| thymidylate kinase [Borrelia burgdorferi N40] Length = 202 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ Sbjct: 8 FYCIEGIDGSGKTSITNKLKDLCNDESR-YYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209 + +++ +S A I N++ Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201 >gi|195941996|ref|ZP_03087378.1| thymidylate kinase (tmk) [Borrelia burgdorferi 80a] Length = 257 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ Sbjct: 63 FYCIEGIDGSGKTSITNKLKALCNDES-KYYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 120 Query: 66 AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L + + ++ DR+L SS AYQG+ E Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 225 Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209 + +++ +S A I N++ Sbjct: 226 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 256 >gi|118463240|ref|YP_883352.1| thymidylate kinase [Mycobacterium avium 104] gi|254776646|ref|ZP_05218162.1| thymidylate kinase [Mycobacterium avium subsp. avium ATCC 25291] gi|118164527|gb|ABK65424.1| thymidylate kinase [Mycobacterium avium 104] Length = 210 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 87/211 (41%), Gaps = 11/211 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T L++ + V P G + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFPRYGRSVTADIAAEALHGEHGDLA 60 Query: 63 GA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 + A A++FA R V + I + +++ DR++ S+ AY R + + Sbjct: 61 SSVYAMAMLFALDRAAAVGD-IEGLRRDHDVVIMDRYVASNAAYTAARLHQDADGPAVAW 119 Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + PD ++L + ++ +R ++R D +ER D + ++ + Sbjct: 120 VHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYER-DDGLQQRTGAV 178 Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206 + +A +VD+ +A ++ Sbjct: 179 YAQLAAAGWGGAWRVVDADVDPARLAADLAA 209 >gi|225551698|ref|ZP_03772642.1| thymidylate kinase [Borrelia sp. SV1] gi|225371725|gb|EEH01151.1| thymidylate kinase [Borrelia sp. SV1] Length = 202 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ Sbjct: 8 FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTKEPSSGIIGELIREQLMNFEN-PLEES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209 + +++ +S A I N++ Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201 >gi|268529284|ref|XP_002629768.1| Hypothetical protein CBG01006 [Caenorhabditis briggsae] Length = 213 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 77/223 (34%), Gaps = 32/223 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I FEG++ +GK+T L + + P +P E L G + Sbjct: 11 RGALIVFEGLDRSGKSTQAQRLVEKIINSGRMAVLQAFPDRQSPVGEMIDRYL--RGEID 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + +I+ + +G ++CDR+ S +Y + + D ++ Sbjct: 69 MDEHALHLLFSADRF-LKKKMIKQHIAQGVDVVCDRYCYSGVSYSLAKGLPE----DWVR 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD + + ++ R + E + ++A Sbjct: 124 VTDQGLPKPDIVLFFQVSPEVAASR--------GGFGNERLETAQLQ---------AEVA 166 Query: 182 R-----NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + V++ + +V + + EL R PL Sbjct: 167 KVMPTLRDDAFWKSVNADAALAAVEKEVFQLYTEL--DRSKPL 207 >gi|216264232|ref|ZP_03436224.1| thymidylate kinase [Borrelia burgdorferi 156a] gi|218249745|ref|YP_002375292.1| thymidylate kinase [Borrelia burgdorferi ZS7] gi|221217600|ref|ZP_03589069.1| thymidylate kinase [Borrelia burgdorferi 72a] gi|223889303|ref|ZP_03623890.1| thymidylate kinase [Borrelia burgdorferi 64b] gi|224532921|ref|ZP_03673532.1| dTMP kinase [Borrelia burgdorferi WI91-23] gi|225550262|ref|ZP_03771221.1| thymidylate kinase [Borrelia burgdorferi 118a] gi|226320838|ref|ZP_03796390.1| thymidylate kinase [Borrelia burgdorferi 29805] gi|226321258|ref|ZP_03796786.1| thymidylate kinase [Borrelia burgdorferi Bol26] gi|215980705|gb|EEC21512.1| thymidylate kinase [Borrelia burgdorferi 156a] gi|218164933|gb|ACK74994.1| thymidylate kinase [Borrelia burgdorferi ZS7] gi|221192546|gb|EEE18764.1| thymidylate kinase [Borrelia burgdorferi 72a] gi|223885224|gb|EEF56327.1| thymidylate kinase [Borrelia burgdorferi 64b] gi|224512159|gb|EEF82549.1| dTMP kinase [Borrelia burgdorferi WI91-23] gi|225369130|gb|EEG98584.1| thymidylate kinase [Borrelia burgdorferi 118a] gi|226233290|gb|EEH32041.1| thymidylate kinase [Borrelia burgdorferi Bol26] gi|226233704|gb|EEH32433.1| thymidylate kinase [Borrelia burgdorferi 29805] gi|312147845|gb|ADQ30504.1| thymidylate kinase [Borrelia burgdorferi JD1] Length = 202 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ Sbjct: 8 FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L + + ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209 + +++ +S A I N++ Sbjct: 171 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 201 >gi|149174610|ref|ZP_01853236.1| Thymidylate kinase [Planctomyces maris DSM 8797] gi|148846720|gb|EDL61057.1| Thymidylate kinase [Planctomyces maris DSM 8797] Length = 222 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 95/220 (43%), Gaps = 16/220 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVL--LSCGVDEF 62 I+ EGI+G+GK T + L Q + + P T ++ L +DE Sbjct: 5 IAIEGIDGSGKGTQAARLHARCQAEGIKTSLIGFPRYDQTLFGKSIGDFLNGRFGELDEV 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSL 120 ++++A R + + I + +++ DR++ S+ A+QG + + + F++ + Sbjct: 65 NPFLASLLYAGDRFES-RSHILNTIETSDVVIFDRYIPSNVAHQGAKLSGAERSEFIEWI 123 Query: 121 QEISVQE-VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++I MP + I+LDLP D K + + + + + + D R+++ Sbjct: 124 EQIEYAIYKMPRLNLAILLDLPADYAQKLIAEKQARSYTEKVADLQEADQTYLANVREVY 183 Query: 178 LDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELV 212 L +A + ++ S + ++ I + V +L+ Sbjct: 184 LQLAEEN-QHWQKIQCLQKETLRSIEEISDEIWSYVSKLI 222 >gi|15595138|ref|NP_212927.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31] gi|2688733|gb|AAC67140.1| thymidylate kinase (tmk) [Borrelia burgdorferi B31] Length = 257 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E R L++ Sbjct: 63 FYCIEGIDGSGKTSITNKLKALCNDESR-YYFTKEPSSGIIGEMIRKQLMNFEN-PLEES 120 Query: 66 AEAIVFAAARLDHVENV--IRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L + + ++ DR+L SS AYQG+ E Sbjct: 121 TFAYLYAADRHDHLYKKGGILEILNTKSRKIITDRYLFSSIAYQGKLG----------YE 170 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ ++ +I +R+Q + D FE + E+ +L I + Sbjct: 171 LNKNFPLPEKVFFIETDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKIFK 225 Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209 + +++ +S A I N++ Sbjct: 226 KLEKKINVIYINNSIKDNLDKNAKKIFNLIK 256 >gi|33563152|dbj|BAC81723.1| pseudo thymidylate kinase [Onion yellows phytoplasma] Length = 174 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 75/182 (41%), Gaps = 18/182 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I L+ L+ + + G + + R + L+ + Sbjct: 2 KLIVFEGLDGSGKTSLIHALQPLLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + + ++++ DR+L S+YAYQ S + L L++I Sbjct: 57 LTRFYLSLVNMAQIQAELFK----NNQLIILDRWLPSTYAYQLFPFSKEKKQLSPLKKIF 112 Query: 125 VQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 PD I LD+ IG R + + + + D ER+ + + RQ + Sbjct: 113 KLNHETILKKPDLLIYLDIDPLIGRTRKKKQKNHQR----DLIERQSLTYFQNVRQGYRS 168 Query: 180 IA 181 ++ Sbjct: 169 LS 170 >gi|283481645|emb|CAZ69761.1| putative thymidylate kinase [Emiliania huxleyi virus 99B1] Length = 327 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 85/218 (38%), Gaps = 16/218 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVL--LSCG 58 G EG +G GK T +LL+R L++++Y V P R +L Sbjct: 104 RRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGD 163 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + A ++A R V++++ + G ++ DR++ S+ A+QG + ++ Sbjct: 164 IKNLDPFLFASLYAQNRW-SVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222 Query: 119 SLQEISVQEV--MPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 E+ E+ +P I LDLP ++ A LD E + R Sbjct: 223 KQTELFENEILGLPHANHIIYLDLPPEVAR---TAMDKDTTRAALDQNELAPLEYKNNVR 279 Query: 175 QIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNI 207 +I+L+ +V D S + V I +I Sbjct: 280 KIYLEQKNTLRRTYDVVKCMDDDIRISRKDVHNKIYDI 317 >gi|72392763|ref|XP_847182.1| thymidylate kinase [Trypanosoma brucei TREU927] gi|62359227|gb|AAX79670.1| thymidylate kinase, putative [Trypanosoma brucei] gi|70803212|gb|AAZ13116.1| thymidylate kinase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 345 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 51/226 (22%), Positives = 92/226 (40%), Gaps = 31/226 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLS--CGVDEFG 63 I F G +GAGK T +++ L ++ P + R VL + Sbjct: 131 IVFGGGDGAGKATQTEYMRKRLDKEGKAHASLDFPSDKHRYGKLIRKVLSGERGALHGLD 190 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + +++F+ R D + + R L GK +L DR+ S++ +Q + +S + F+ L+ Sbjct: 191 PKLFSLLFSLNRFDTLPEL-RYWLTHGKKILLDRYYTSNFGHQASKLEESERSDFIRHLE 249 Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177 ++ ++ + PD + LDLP L R RES LD E + E RQ + Sbjct: 250 QLELEWLKLPPPDVALYLDLPPAAALV-AMQRDEKRES--LDIHETAGLSYKENVRQTYV 306 Query: 178 -----------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ ++ +R S + V I N V + + Sbjct: 307 WCCQNQRNWVQIECCNDEGERY-------SREKVHEMIYNAVAKHI 345 >gi|224531531|ref|ZP_03672163.1| thymidylate kinase [Borrelia valaisiana VS116] gi|224510996|gb|EEF81402.1| thymidylate kinase [Borrelia valaisiana VS116] Length = 202 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ + LK ++ + T+EP E + L++ Sbjct: 8 FYCIEGIDGSGKTSITNKLKTLCNDES-KYYFTKEPSSGIIGEMIKEQLMNFKN-PLQES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L I ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRNDHLYKKGGILETLNTKSIKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ +++ ++ +R+Q D FE + E+ +L I + Sbjct: 116 LNKNFPLPEKVFFIEIEPNLAYERIQK-----HRTQSDLFELERYKTFEQIALKYLKIFK 170 Query: 183 NQPDRCHIVDSAHSF----QSVATNILNIVW 209 + +++ +S A I N++ Sbjct: 171 KLEKKINVIYINNSIKGDLDKNAKKIFNLIK 201 >gi|57167762|ref|ZP_00366902.1| thymidylate kinase [Campylobacter coli RM2228] gi|57020884|gb|EAL57548.1| thymidylate kinase [Campylobacter coli RM2228] Length = 185 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 83/198 (41%), Gaps = 15/198 (7%) Query: 13 EGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 + GK+T ISLLK + + T EPGGT R +LL + + E ++F Sbjct: 2 DCVGKSTQISLLKECFK----EAVFTAEPGGTKLGNHLRELLLYKPY-QLDKKTELLLFL 56 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 A R H E +++ + K+++ DR S AY + ++ L L +++ P Sbjct: 57 ADRAQHCEEILKA--NQDKLIISDRSFISGMAYAKDF---ENEELFRLNAFALENFFPQK 111 Query: 133 TIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 I L ++ +R+ Q E +DYF + + +K + + + Sbjct: 112 VIFLKGDENLIKERLSQKEQDAIEKRGIDYF----LSVQDKLENTLYFLKEKINLQVLTL 167 Query: 192 DSAHSFQSVATNILNIVW 209 ++ + +++ I + + Sbjct: 168 NANDTKENLHQKIKDFLQ 185 >gi|183981320|ref|YP_001849611.1| thymidylate kinase Tmk [Mycobacterium marinum M] gi|183174646|gb|ACC39756.1| thymidylate kinase Tmk [Mycobacterium marinum M] Length = 217 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 11/211 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T L++ + V P G + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 + A A +FA R V+ I + ++++ DR++ S+ AY R + Sbjct: 61 SSVFAMATLFALDRAAAVDE-IHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGEAVAW 119 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + PD ++L +PV++ +R + R D +ER D + ++ + Sbjct: 120 VGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYER-DDGLQQRTGSV 178 Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206 + ++A R +VD+ ++A +++ Sbjct: 179 YAELAAAGWGGRWLVVDADVDPGALAATLMS 209 >gi|323347864|gb|EGA82125.1| Cdc8p [Saccharomyces cerevisiae Lalvin QA23] Length = 168 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 8/142 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + + + I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIIL---DLP 139 + V + PD T+ L D+ Sbjct: 116 LQPDVGLLKPDLTLFLSTQDVD 137 >gi|317061547|ref|ZP_07926032.1| thymidylate kinase [Fusobacterium sp. D12] gi|313687223|gb|EFS24058.1| thymidylate kinase [Fusobacterium sp. D12] Length = 226 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 13/223 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57 N G I EG + +GK T LL + P + A + L+ Sbjct: 4 NMGKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYLAGEFGL 63 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGER--DSSQH 114 ++ + ++A R + + +L + DR++ S+ +Q + + Sbjct: 64 DAEKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQGEEKE 123 Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 +L L+ + Q PD I LD+P + ++ R + + E Sbjct: 124 HYLSWLETLEYEQFQIPRPDFVIFLDMPTKQAQELMRERKNKMTGESAKDIHENNQEYLE 183 Query: 172 KRRQIFLDIARNQPD-RCHIVDSAH--SFQSVATNILNIVWEL 211 K Q D+A R VD S + + I V E+ Sbjct: 184 KSYQNACDMAERYHWIRISCVDGERIKSMEEIQKEIWEKVREV 226 >gi|118618060|ref|YP_906392.1| thymidylate kinase [Mycobacterium ulcerans Agy99] gi|118570170|gb|ABL04921.1| thymidylate kinase Tmk [Mycobacterium ulcerans Agy99] Length = 222 Score = 118 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 45/211 (21%), Positives = 90/211 (42%), Gaps = 11/211 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T L++ + V P G + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLSEGLRKEFEAAGRSVATLAFPRYGNSVTADIAAEALHGEHGDLA 60 Query: 63 GAE-AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 + A A +FA R V+ I + ++++ DR++ S+ AY R + Sbjct: 61 SSVFAMATLFALDRAAAVDE-IHGLCLAYEVVILDRYVASNAAYSAARLHQDSAGEAVAW 119 Query: 120 LQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + PD ++L +PV++ +R + R D +ER D + ++ + Sbjct: 120 VGRMEYERFGLPEPDWQVLLAVPVELAGERSRGRARSDPGRPRDSYER-DDGLQQRTGSV 178 Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILN 206 + ++A R +VD+ ++A +++ Sbjct: 179 YAELAAAGWGGRWLVVDADVDPGALAATLMS 209 >gi|73852905|ref|YP_294189.1| putative thymidylate kinase [Emiliania huxleyi virus 86] gi|72415621|emb|CAI65858.1| putative thymidylate kinase [Emiliania huxleyi virus 86] Length = 327 Score = 118 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 75/185 (40%), Gaps = 11/185 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVL--LSCG 58 G EG +G GK T +LL+R L++++Y V P R +L Sbjct: 104 RRGRIFVIEGGDGCGKQTQATLLRRRLEQEDYPVKTIDFPNNERQHGMLIREILAGSHGD 163 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + A ++A R V++++ + G ++ DR++ S+ A+QG + ++ Sbjct: 164 IKNLDPFLFASLYAQNRW-SVKHILNFWITRGYNIILDRYIISNIAHQGAHEYRNREYVA 222 Query: 119 SLQEISVQEV--MPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 E+ E+ +P I LDLP ++ LD E + R Sbjct: 223 KQTELFENEILGLPHANHIIYLDLPPEVAR---TAMDKDTTRVALDQNELAPLEYKNNVR 279 Query: 175 QIFLD 179 +I+L+ Sbjct: 280 KIYLE 284 >gi|145503822|ref|XP_001437883.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405044|emb|CAK70486.1| unnamed protein product [Paramecium tetraurelia] Length = 205 Score = 118 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 81/209 (38%), Gaps = 23/209 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLFI EG++ GK+T LL L D + P + + L D Sbjct: 5 RRGLFIVLEGLDKCGKSTQTELLSEAL-----DAKKMQFPDRSTSMGLIISDYLKGKRD- 58 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + +I L +G ++CDR+ S A+ + L + + Sbjct: 59 INDQVIHLLFSANRWEAQNTIIE-TLNKGINIVCDRYAYSGVAFSSAKG----LPIQWCK 113 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD I L P+ + R + +E+++ + +A Sbjct: 114 QCDSGLPKPDLVIYLRAPI--------KQLKDRGDFGAERYEKQEFQQQVQEVF--DKMA 163 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + +I+ + + + + + I+ ++ + Sbjct: 164 QEEQ--FNIISAIQTKEEIFSQIMELIND 190 >gi|257464026|ref|ZP_05628411.1| thymidylate kinase [Fusobacterium sp. D12] Length = 222 Score = 118 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 75/221 (33%), Gaps = 13/221 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL + P + A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQSKLLLEQFLSQGRKARKLSFPNYSSPACEPVKMYLAGEFGLDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGER--DSSQHLF 116 ++ + ++A R + + +L + DR++ S+ +Q + + + Sbjct: 62 EKVNPYPVSAMYAIDRYASYQKDWGYDYQQEDMLFIADRYVPSNMIHQASKLQGEEKEHY 121 Query: 117 LDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L+ + Q PD I LD+P + ++ R + + EK Sbjct: 122 LSWLETLEYEQFQIPRPDFVIFLDMPTKQAQELMRERKNKMTGESAKDIHENNQEYLEKS 181 Query: 174 RQIFLDIARNQPD-RCHIVDSAH--SFQSVATNILNIVWEL 211 Q D+A R VD S + + I V E+ Sbjct: 182 YQNACDMAERYHWIRISCVDGERIKSMEEIQKEIWEKVREV 222 >gi|118468484|ref|YP_886239.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155] gi|118169771|gb|ABK70667.1| thymidylate kinase [Mycobacterium smegmatis str. MC2 155] Length = 210 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 15/203 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLSCGVDE 61 + I+ EG++GAGK T + L+ + + V P PA AA + S G Sbjct: 1 MLIAIEGVDGAGKRTLTNGLRAAFETNHKSVASLAFPRYHQSVPADLAAEALRGSHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 A A +FA R I +++ DR++ S+ AY R + Sbjct: 61 ESVYAMATLFALDRAG-AREQIEHLQAAYDVVILDRYVASNAAYSAARLHQGVDGEVVTW 119 Query: 120 LQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + E+ + +PD ++L++P ++ +R ++R + D +ER D + + ++ Sbjct: 120 VHELEFGRLHLPVPDWQVLLNVPTELAAQRAEHRANTEADRAKDAYER-DDGLQRRTGEV 178 Query: 177 FLDIARNQ-PDRCHI----VDSA 194 + +A R I VD+ Sbjct: 179 YAALAAADWGGRWAIAGPDVDAT 201 >gi|282174114|ref|YP_003358216.1| ORF77 [Anguillid herpesvirus 1] gi|281308957|gb|ADA57840.1| ORF77 [Anguillid herpesvirus 1] Length = 214 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 19/206 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ EG + GK+T + L VH + GT R + Sbjct: 16 GRLIAVEGCDRTGKSTLCARLAETWPESITAVHFPKM-EGTFTGSVLRTAFKTP-FVRSN 73 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++F+A R + + + I L +GKI++CDR+ S AY + Q + + Sbjct: 74 PRIMHLLFSANRWELM-DFIGAELAKGKIVVCDRYFGSGLAYSMVKGLDQ----EWCEGP 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + PD TI LD P+ +KR ++ FE + K I+ +AR Sbjct: 129 DRRLIQPDATIYLDAPLSALMKR-------KDWGADTVFETE--EFQSKLIPIYDKLARE 179 Query: 184 QPDRCHIVDSA-HSFQSVATNILNIV 208 R +D+ +V T + + Sbjct: 180 --KRWTRIDADLLDADAVYTLVEGYI 203 >gi|237786074|ref|YP_002906779.1| thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385] gi|237758986|gb|ACR18236.1| Thymidylate kinase [Corynebacterium kroppenstedtii DSM 44385] Length = 219 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 20/223 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + ++ EGI+GAGK T ++ +++ L + V + P + A+ AR L D Sbjct: 1 MIVACEGIDGAGKNTLVTAIEKELVEREKPVALVSFPRYNDSVHAQLARSALYGGMGDVV 60 Query: 63 GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL------ 115 + A +FA R + + + I +G +L DRF+ S+ AY R Sbjct: 61 DSACGMATLFALDRAE-IADDIAELSEDGYFVLIDRFVASNAAYTAARSGWDGQSPSQDN 119 Query: 116 ----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++ L+ + +PD + L P + +R R S D FE+ D + + Sbjct: 120 PTVSWIAELEFERLGIPVPDLHVFLSTPPRLASERAVAREGEDASRARDAFEK-DSDLQQ 178 Query: 172 KRRQIFLDIARNQPDR-CHIVDSAHSFQSVATNILNIVWELVQ 213 + + +AR+Q +V V +V +++ Sbjct: 179 RTAAAYEALARDQWQSPWVVV----EPGEVTRQATEVVEAILR 217 >gi|72117012|ref|XP_789676.1| PREDICTED: similar to thymidylate kinase [Strongylocentrotus purpuratus] gi|115961274|ref|XP_001189465.1| PREDICTED: similar to thymidylate kinase [Strongylocentrotus purpuratus] Length = 181 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 15/184 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G + FEG + +GK+T L + K + R P + L D Sbjct: 1 MRRGALVVFEGCDRSGKSTQCKKLVESMLEKGMKAELMRFPERSTVIGKLIDSYLKNSKD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A ++F+A R + ++ + L EG L+ DR+ S A+ ++ L+ Sbjct: 61 -VQDNAIHLLFSANRWE-LKPEMERKLNEGVTLVVDRYAYSGVAFTAAKEGIS---LNWC 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V +PD + L + + KR + +E+ I + + F + Sbjct: 116 KRPDVGLPLPDLVLFLKVSSEAAEKR--------GGFGEERYEK--SEIQARVAKNFEKL 165 Query: 181 ARNQ 184 N Sbjct: 166 QEND 169 >gi|240172610|ref|ZP_04751269.1| thymidylate kinase [Mycobacterium kansasii ATCC 12478] Length = 214 Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 11/207 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T L+ Q V P G + A+ A L D Sbjct: 1 MLIAVEGVDGAGKRTLTVRLRAAFQAVGKSVVTLAFPRYGRSVTADIAAEALHGQHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116 A A A +FA R I +++ DR++ S+ AY R + Sbjct: 61 SSAYAMATLFALDRAGAAAE-IAELRRNYDVVILDRYVASNAAYSAARLREDAGGPAVAW 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + ++ + +PD ++L +P D+ +R ++R D +ER D + + + Sbjct: 120 VQQIEYQRMGLPVPDWQVLLAVPADLAAQRARSRAEADPGRARDSYER-DDELQRRTGVV 178 Query: 177 FLDIARNQ-PDRCHIVDSAHSFQSVAT 202 + +A R +VDS +A Sbjct: 179 YAQLAAADWNGRWLVVDSDVDPDRLAA 205 >gi|331695112|ref|YP_004331351.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] gi|326949801|gb|AEA23498.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] Length = 569 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 84/223 (37%), Gaps = 22/223 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE---PGGTPAAEAARHVLLSCGVDE 61 + I+FEG+ GAGK+T +L R L+ + V V + P + +L + Sbjct: 1 MLITFEGLPGAGKSTQSRMLARCLEANGHHVTVLPDLATLDTEPISATLVDLLRTGDDPF 60 Query: 62 F---GAEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGER-----DS 111 A + ++ AA R D V V+ PAL E +++ DR + + +Y + Sbjct: 61 LRTGDAITDTMITAAIRADLVATVLDPALAENPAGVVIEDRGIHTMASYAIAALLRQHRA 120 Query: 112 SQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + LD L + ++ P + L +P ++ +R R R A D + Sbjct: 121 PAEIALDWLNALTALAGPRPTRALWLRIPPNVAARRADERGGDRRPASTD----EQRAHL 176 Query: 171 EKRRQIFLDIARNQPDRCH--IVDSAHSFQSVATNILNIVWEL 211 + +A P ++D I + ++ Sbjct: 177 TWVDHAYALLAERDPQLTVLDVID--LDPVDTHLAIHAALRQI 217 >gi|76664864|emb|CAJ17870.1| thymidylate kinase [Candidatus Phytoplasma solani] gi|76664904|emb|CAJ17888.1| thymidylate kinase [Candidatus Phytoplasma solani] Length = 115 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 3/113 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + FISFEG++G GKTT I LK++L+ ++ V + + G + + R++ L+ Sbjct: 1 MTN-KFISFEGLDGGGKTTLIKQLKKYLKNQHKKVIICQGLGSSLIGKPIRNLFLNQSN- 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 ++ L E +I P+L++G I+L DR+ DS++AYQ + + Sbjct: 59 -LSPNTRFLLSLTNMLQTQEELIIPSLLKGYIVLIDRWYDSTFAYQSDDINLD 110 >gi|302530810|ref|ZP_07283152.1| predicted protein [Streptomyces sp. AA4] gi|302439705|gb|EFL11521.1| predicted protein [Streptomyces sp. AA4] Length = 716 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 83/209 (39%), Gaps = 23/209 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I+ EG + L R+L V +T +P E R L Sbjct: 475 NGFLIAIEGTTAVNTAEQAARLARWLGTGTRPVVLTADP---ALGEQ-RFRTLVSDAALT 530 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G A+A+V AA R + VE I+PAL G +++ +RF+DS A L+ L + Sbjct: 531 GVRAQALVAAAVRAELVERQIQPALDAGSVVVMERFVDSPLASLSAAGELDRDELEGLVD 590 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD E + +++ ++A Sbjct: 591 WATGRLRPDLTVLLD-------------SEHPEDPQP------PLKDQLWVQKLLAEMAA 631 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 PDR +VD+ S + VA + + V + Sbjct: 632 ADPDRYVVVDAEGSDRDVAVRVRSAVQSV 660 >gi|311739824|ref|ZP_07713658.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035] gi|311304897|gb|EFQ80966.1| thymidylate kinase [Corynebacterium pseudogenitalium ATCC 33035] Length = 204 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 89/210 (42%), Gaps = 10/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T +S LK L R + R A A + + G A Sbjct: 1 MLISIEGIDGAGKNTLVSALKESLDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +FA R V++ ++ A ++L DR++ S+ AY ++ + + Sbjct: 61 YAMATLFALDRYG-VKDQLQRAKESDTVVLLDRYVASNAAYSAA-RLEDDAVMEWVHNLE 118 Query: 125 VQEV-MP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +P D + LD V++ +R Q R S D +ER D + E+ + +A Sbjct: 119 FGTLSLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER-DGGLQERTAAAYRRLA 177 Query: 182 RN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R + ++ + I ++V E Sbjct: 178 DAGWGGRWI---ATADADTIISAIKDLVGE 204 >gi|326383262|ref|ZP_08204950.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395] gi|326198012|gb|EGD55198.1| thymidylate kinase [Gordonia neofelifaecis NRRL B-59395] Length = 209 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G+ ++ EG++GAGK T + ++ + V P G + A+ A L D Sbjct: 2 GILVAVEGLDGAGKRTIVGRIEAAATDRGASVSTLAFPRYGESITADLASEALHGRHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R + R AL +++CDR+ S+ AY R + ++ Sbjct: 62 RESVYAMALLFALDRAAARRQL-REALTAHDLVICDRYCASNAAYSAARLGGGADSEVVE 120 Query: 119 SLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + ++ PD ++L +P D+ + R R +D +ER D + + Sbjct: 121 WVADLEFGRFQLPVPDHQLLLGVPPDVAMSRANGRAETDADRPVDSYER-DAELQHAVYR 179 Query: 176 IFLDIARNQ 184 ++ + + Sbjct: 180 VYGEFVESH 188 >gi|323332865|gb|EGA74268.1| Cdc8p [Saccharomyces cerevisiae AWRI796] gi|323354251|gb|EGA86094.1| Cdc8p [Saccharomyces cerevisiae VL3] Length = 138 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 5/136 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ GKTT ++L + LQ + + + P + + L+ Sbjct: 1 MGRGKLILIEGLDRTGKTTQCNILYKKLQ---PNCKLLKFPERSTRIGGLINEYLTDDSF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +A ++F+A R + + + I+ L+EGK ++ DR++ S AY + + + LD Sbjct: 58 QLSDQAIHLLFSANRWE-IVDKIKKDLLEGKNIVMDRYVYSGVAYSAAK-GTNGMDLDWC 115 Query: 121 QEISVQEVMPDCTIIL 136 + V + PD T+ Sbjct: 116 LQPDVGLLKPDLTLFF 131 >gi|75761480|ref|ZP_00741445.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491041|gb|EAO54292.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 228 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 21/222 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 I+ EGI+G+GKT +SLL++ L+ K+ +V + P LS + Sbjct: 9 KIIAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLSGNEEVNAN 68 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 ++ ++ +A R + + LL +RF SS YQ R + F+ Sbjct: 69 NVDPKSMSLWYALDRW---KEFENSNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQ 125 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRR 174 + E+ + PD I+ DL + K V N+ D +E + I R Sbjct: 126 WIFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADVYE-ESADIMSNAR 184 Query: 175 QIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWE 210 I+ D+A+ + I++ + + + ++ ++ + Sbjct: 185 GIYQDLAKKY-NNIVIINCLDENNKMKTPEEINQIVMKVIED 225 >gi|195335464|ref|XP_002034385.1| GM19929 [Drosophila sechellia] gi|194126355|gb|EDW48398.1| GM19929 [Drosophila sechellia] Length = 182 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 66/213 (30%), Gaps = 45/213 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEG + +GKTT LL L+ K P + + + L+ D Sbjct: 5 KRGALIIFEGCDRSGKTTQSRLLVELLKSKGIPTLPMNFPERSSSIGQVINSYLTNSKD- 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E ++F+A R +H+ LD Sbjct: 64 LPDEVIHLMFSANRWEHMNQT----------------------------------LDWCY 89 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD L P N + R + +E+ V + ++F I Sbjct: 90 APESGLIKPDAVFYLRAP--------SNELTNRGQYGDERYEK--VEFQGRVAEVFDRIC 139 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H D+ S + + I I EL+ K Sbjct: 140 SKEASYFHKFDATQSVEDLHALIGRITEELLPK 172 >gi|322830155|gb|EFZ33280.1| thymidylate kinase, putative [Trypanosoma cruzi] Length = 351 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 86/226 (38%), Gaps = 21/226 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63 I FEG +G GK T LL L + + V P E R VL G+ + Sbjct: 133 IVFEGGDGVGKATQARLLVDRLVDEGHRVSTIEFPSERNRYGELLREVLSGKKGGIQDLD 192 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + +++F+ R + + + + G ++ DR+ ++ +Q + + + F+ LQ Sbjct: 193 PKLFSLLFSMNRFAFLPEL-QYWMCRGTKIVLDRYYTANCGHQASKFPEEERAGFISHLQ 251 Query: 122 EI-SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +P + + LDLP ++ LD E E R+ +L Sbjct: 252 LMEVSWLRLPPANLVLYLDLPPHAAFSAMKA---DPNRGSLDIHETAQRAYKENVRKTYL 308 Query: 179 DIARNQPDRCHI-----VDSAHSFQSVATNILNIVWELVQKRVSPL 219 N + H V S S + E++++++ P+ Sbjct: 309 WCCENMSNWFHTDCCDCVGSRLSREETHNKAY----EMIERQLIPI 350 >gi|29841447|gb|AAP06479.1| SJCHGC06009 protein [Schistosoma japonicum] Length = 238 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 32/236 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G+F+ EG + GKTT SLL + L + + V TP L G Sbjct: 6 SRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYL--GGN 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + A ++F A R + IR A+ G ++ DR++ S AY + + + Sbjct: 64 GDINSHALHLLFTANRWEKQSE-IRNAISNGISVVADRYIYSGIAYTAAKLPPTPNW-EW 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 E+ + D I L + + + R + +E+ ++ + ++ Sbjct: 122 CCEMEKGLLEADLVICL--TPENL-----DELNSRNGYGNERYEK--DDFQKRVLENYVR 172 Query: 180 IARN----QPDR------------CHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218 +++ + H + + + + V I+ +V ++ P Sbjct: 173 LSKEVELDNSEWQNNDETGDSVGLWHFIQATNKTVEEVHKCIMVLVKSKLESISGP 228 >gi|255323824|ref|ZP_05364950.1| dTMP kinase [Corynebacterium tuberculostearicum SK141] gi|255299004|gb|EET78295.1| dTMP kinase [Corynebacterium tuberculostearicum SK141] Length = 204 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 10/210 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T +S LK R + R A A + + G A Sbjct: 1 MLISIEGIDGAGKNTLVSALKESFDRPVEVIAFPRYADSIHAQLAQKALYGKMGDLTDSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +FA R V++ ++ A ++L DR++ S+ AY ++ + ++ Sbjct: 61 YAMATLFALDRYG-VKDQLQRAKESDTVVLLDRYVASNAAYSAA-RLEDDAVMEWVHDLE 118 Query: 125 VQEV-MP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + +P D + LD V++ +R Q R S D +ER D + E+ + +A Sbjct: 119 FGTLCLPQADLQVYLDTAVEVASERAQARAQADASRERDRYER-DGGLQERTAAAYRRLA 177 Query: 182 RN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R + ++ + I ++V E Sbjct: 178 DAGWGGRWI---ATADADTIISAIKDLVGE 204 >gi|237845145|ref|XP_002371870.1| thymidylate kinase, putative [Toxoplasma gondii ME49] gi|211969534|gb|EEB04730.1| thymidylate kinase, putative [Toxoplasma gondii ME49] gi|221480782|gb|EEE19211.1| thymidylate kinase, putative [Toxoplasma gondii GT1] gi|221501447|gb|EEE27223.1| thymidylate kinase, putative [Toxoplasma gondii VEG] Length = 273 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 92/270 (34%), Gaps = 60/270 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G + FEGI+ +GK+T L L ++ + + R P TP + L + Sbjct: 7 KRGCLVVFEGIDRSGKSTQARLAYERLTKEGHAAELIRFPDRTTPIGQVLDRFLANASWS 66 Query: 61 EFG-------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSS 112 G + ++FAA R + ++R AL EG+ +L DR+ S AY G S Sbjct: 67 SDGQHPQVPPPQLTHLLFAANRWEAQARILR-ALGEGRTVLVDRYSFSGIAYTVGAAPSV 125 Query: 113 QHLFLDSLQEIS---------------------------------VQEVMPDCTIILDLP 139 L+ + + PD LD+ Sbjct: 126 AETEATRLRREAEASGDVEKTAEAVAASTAATGAPVDATFCRESERGLLAPDAVFFLDVA 185 Query: 140 VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQ 198 KR + +E+ + E+ Q++ N P + + + S + Sbjct: 186 PQETQKR--------GGYGDEVYEK--LATQERVYQVYRQF-DNLP-YWRRIAASSLSIE 233 Query: 199 SVATNILNIVWELVQ----KRVSPLSSKKD 224 + + + +++ ++ PL S D Sbjct: 234 ELHEKLFEQLKSVIEATQPDQLLPLGSTGD 263 >gi|224534161|ref|ZP_03674741.1| dTMP kinase [Borrelia spielmanii A14S] gi|224514586|gb|EEF84900.1| dTMP kinase [Borrelia spielmanii A14S] Length = 202 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I+ LK ++ + T+EP + + L++ Sbjct: 8 FYCIEGIDGSGKTSIINKLKALCNDESR-YYFTKEPSSGIVGKMIKEQLMNFKN-PLKES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSTKVITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + +I +R+Q + D FE + E+ +L + Sbjct: 116 LNKNFPLPEKAFFIKTDPNIAYERIQKNRT-----QSDLFELEKYKTFEQIALKYLKTFK 170 Query: 183 NQPDRCHI--VDSA--HSFQSVATNILNIVW 209 + ++ +D++ S I N++ Sbjct: 171 KIEKKINVIYIDNSIKDSLDKNVEKIFNLIK 201 >gi|71423920|ref|XP_812619.1| thymidylate kinase [Trypanosoma cruzi strain CL Brener] gi|70877423|gb|EAN90768.1| thymidylate kinase, putative [Trypanosoma cruzi] Length = 351 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 90/228 (39%), Gaps = 23/228 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63 I FEG +G GK T LL L + + V P E R VL G+ + Sbjct: 133 IVFEGGDGVGKATQARLLVDRLVDEGHRVSSIEFPSERNRYGELLREVLSGKKGGIQDLD 192 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + +++F+ R + + + + G ++ DR+ ++ +Q + + + F+ LQ Sbjct: 193 PKLFSLLFSMNRFAFLPEL-QYWMCRGTKIVLDRYYTANCGHQASKFPEEERAGFIGHLQ 251 Query: 122 EI-SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +P + + LDLP ++ LD E E R+ +L Sbjct: 252 LMEVSWLRLPPANLVLYLDLPPHAAFSAMK---VDPNRGSLDIHETAQRAYKENVRKTYL 308 Query: 179 DIARNQPDRCHIVD-----SAH-SFQSVATNILNIVWELVQKRVSPLS 220 N + H D + S + N V+E++++++ P++ Sbjct: 309 WCCENMSNWFHT-DCCDCAGSRLSREETH----NKVYEVIERQLIPIA 351 >gi|167750887|ref|ZP_02423014.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702] gi|167656066|gb|EDS00196.1| hypothetical protein EUBSIR_01871 [Eubacterium siraeum DSM 15702] gi|291557390|emb|CBL34507.1| thymidylate kinase [Eubacterium siraeum V10Sc8a] Length = 222 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 80/219 (36%), Gaps = 21/219 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----V 59 G EG++G GK+T + +LK + ++ P A+ LS Sbjct: 9 GKLFVIEGLDGCGKSTQLEMLKA---SADSNIRFISFPNYNSASGEIIKDYLSGKFCEEN 65 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFL 117 GA +A R + GK ++ R+ S+ YQ + +L Sbjct: 66 GRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKSRWDEYL 125 Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L++ + P+ I LD+PV++ K + RY E A D E +V + R Sbjct: 126 EWLEDYEYDKFAIPRPERIIFLDMPVEVSQKLLSARYGGDE-AKKDIHES-NVAFLKACR 183 Query: 175 QIFLDIARNQPDRCHIV---DSAHS--FQSVATNILNIV 208 + + +I+ D + + + + ++ Sbjct: 184 ET--ALYTADKKGWYILPCSDGENPYTPEKINKELSALI 220 >gi|111222127|ref|YP_712921.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a] gi|111149659|emb|CAJ61352.1| hypothetical protein FRAAL2706 [Frankia alni ACN14a] Length = 222 Score = 115 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GLF+S +G G GK+T ++ + L+ + +H T EP +P R + Sbjct: 1 MRPGLFVSVDGPGGVGKSTTLATVTEILRDQKVPIHATTEPSRSPIGNLIRA-----STN 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A A + A R HV I P L G +++ DR++ SS Q + + ++ Sbjct: 56 SHRGLALAHLVAGDRHHHVTTEIIPRLDAGDVVVSDRYIPSSLVLQRF----DAITIPTI 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 EI+ + PD +IL R+ R + S FER Sbjct: 112 LEINAGLLQPDLAVILTAAPTAIAARMAARGGVTNS----RFER 151 >gi|158318239|ref|YP_001510747.1| thymidylate kinase [Frankia sp. EAN1pec] gi|158113644|gb|ABW15841.1| thymidylate kinase [Frankia sp. EAN1pec] Length = 241 Score = 115 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 52/203 (25%), Positives = 88/203 (43%), Gaps = 21/203 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62 + ++ EG++GAGK T S L + P P A R +L G + Sbjct: 31 MIVAIEGVDGAGKNTLTSRLVEAVTATGRTAGTFAFPRYAAGPLGTAVRAML--DGDERL 88 Query: 63 -----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHL 115 A A A++FA R + + + R + +L+ DR+L S+ AY R + Sbjct: 89 AGLAGSARATALLFALDRANALPELAR-CVAAYDVLIVDRYLGSNAAYGAARLPAPERAE 147 Query: 116 FLDSLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 FLD + E+ + PD ++LD+PV+ + R + + LD FE D + + Sbjct: 148 FLDWIAELELTRLGLPRPDLQVLLDVPVETARAGARARAAEDTARALDTFES-DAGLQAR 206 Query: 173 RRQIFLDIARN---QPDRCHIVD 192 +I+L +A + P +VD Sbjct: 207 CAEIYLSLAADSWVAP--WLVVD 227 >gi|71411881|ref|XP_808153.1| thymidylate kinase [Trypanosoma cruzi strain CL Brener] gi|70872296|gb|EAN86302.1| thymidylate kinase, putative [Trypanosoma cruzi] Length = 351 Score = 115 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 48/223 (21%), Positives = 89/223 (39%), Gaps = 15/223 (6%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63 I FEG +G GK T LL L + + V P E R VL G+ + Sbjct: 133 IVFEGGDGVGKATQTRLLVNRLVDEGHRVSSIEFPSERNRYGELLREVLSGKKGGIQDLD 192 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQ 121 + +++F+ R + + + + G ++ DR+ ++ +Q + + + F+ LQ Sbjct: 193 PKLFSLLFSMNRFAFLPEL-QYWMCRGTKIVLDRYYTANCGHQASKFPEEERAGFIGHLQ 251 Query: 122 EI-SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +P + + LDLP ++ LD E E R+ +L Sbjct: 252 LMEVSWLRLPPANLVLYLDLPPHAAFSAMKA---DPNRGSLDIHETAQRAYKENVRKTYL 308 Query: 179 DIARNQPDRCHI--VDSAHSFQSVATNILNIVWELVQKRVSPL 219 N + H D A S S N V+E++++++ P+ Sbjct: 309 WCCENMSNWFHTNCCDCAGSRLS-REETHNKVYEMIERQIIPI 350 >gi|300701613|ref|XP_002994999.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01] gi|239603498|gb|EEQ81328.1| hypothetical protein NCER_102294 [Nosema ceranae BRL01] Length = 199 Score = 115 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEFG 63 +F+ FEG++ +GK+T + + L+ + P + E LL G Sbjct: 1 MFVVFEGLDKSGKSTTCDSVYKKLKELDIHTTQMHFPDRSSITGEILNKYLL--GKVNLT 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA ++F+A R +N I G ILLCDR+ S + + +++ + + Sbjct: 59 NEATHLLFSADRYQ-KKNFIEKTSRSG-ILLCDRYSWSGICFSHAKGIDLGWAVETERLL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 PD T L+ V++ +KR + + E + K + +L + R+ Sbjct: 117 ----PKPDITFFLEADVNVLMKR--------HNWGDEILETR--EFQLKAAEAYLQM-RD 161 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +D+ S + +++ + + +++ Sbjct: 162 YVKNLIKIDATKSVAEITDIVVDTIIKFQKRQ 193 >gi|216263713|ref|ZP_03435708.1| thymidylate kinase [Borrelia afzelii ACA-1] gi|215980557|gb|EEC21378.1| thymidylate kinase [Borrelia afzelii ACA-1] Length = 202 Score = 115 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 86/211 (40%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I+ LK + ++ + T+EP E + L++ Sbjct: 8 FYCIEGIDGSGKTSIINKLKTICKNESR-YYFTKEPSSGIIGEMIKEQLMNFKN-PLKES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L ++ DR+L SS AYQG+ E Sbjct: 66 TFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + I +R+Q + D FE + E+ +L + Sbjct: 116 LNKNFPLPEKVFFIKTDPKIAYERIQKNRT-----QSDLFELEKYKTFEQITLKYLKTFK 170 Query: 183 NQPDRCHI--VDSA--HSFQSVATNILNIVW 209 ++ +D++ + A I N++ Sbjct: 171 KIEKTINVIYIDNSIKDNLDKNAEKIFNLIK 201 >gi|302685604|ref|XP_003032482.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8] gi|300106176|gb|EFI97579.1| hypothetical protein SCHCODRAFT_84907 [Schizophyllum commune H4-8] Length = 221 Score = 115 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 63/223 (28%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG++ +GK+T + LK L V + + P T A L ++ Sbjct: 3 TRGAFIVIEGLDRSGKSTQAAKLKEKLAADGVKVELMKFPDRTTAIGKMIDAYLRTNIE- 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER------------ 109 ++++A R + + + I L EG ++CDR+ S A+ + Sbjct: 62 MDDHVVHLLYSANRWE-LASRISTLLTEGTTIICDRYAFSGIAFSASKVASTSASTTVTS 120 Query: 110 ---------------------------------------DSSQHLFLDSLQEISVQEVMP 130 D+S L + + P Sbjct: 121 TSSSTSTTAAPPTSTGSSTCGSSPTPAKTKDTCPTAKTTDTSPLLPYAWCRAPDIGLPAP 180 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 D T+ D+ + R + +ER+DV + Sbjct: 181 DVTLFFDIAPEAARAR--------GGYGEERYEREDV--QRRV 213 >gi|111115628|ref|YP_710246.1| thymidylate kinase [Borrelia afzelii PKo] gi|110890902|gb|ABH02070.1| thymidylate kinase [Borrelia afzelii PKo] Length = 202 Score = 115 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 24/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I+ LK + ++ + T+EP E + L++ Sbjct: 8 FYCIEGIDGSGKTSIINKLKTICKNESR-YYFTKEPSSGIIGEMIKEQLMNFKN-PLKES 65 Query: 66 AEAIVFAAARLDHVENV--IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A ++AA R DH+ I L ++ DR+L SS AYQG+ E Sbjct: 66 IFAYLYAADRHDHLYKKGGILEILNTKSTKIITDRYLFSSIAYQGKLG----------YE 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + + I +R+Q + D FE + E+ +L + Sbjct: 116 LNKNFPLPEKVFFIKIDPKIAYERIQKNRT-----QSDLFELEKYKTFEQITLKYLKTFK 170 Query: 183 NQPDRCHI--VDSA--HSFQSVATNILNIVW 209 ++ +D++ + A I N++ Sbjct: 171 KIEKTINVIYIDNSIKDNLDKNAEKIFNLIK 201 >gi|11875610|gb|AAG40728.1|AF272669_1 thymidine kinase [Shrimp white spot syndrome virus] gi|15021563|gb|AAK77840.1|AF369029_171 ORF171, putative chimeric thymidine kinase - thymidylate kinase [shrimp white spot syndrome virus] gi|19482046|gb|AAL89322.1| WSSV454 [shrimp white spot syndrome virus] Length = 388 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 16/210 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + EG + GK+T LL Y P + + L+ ++ Sbjct: 194 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIE-LDDH 252 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A ++F+A R + V + I+ L +G ++ DR+ S + R ++ Sbjct: 253 AAHLLFSANRWE-VCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVD---TVEWCSASDE 308 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA-RNQ 184 P + + + + S R++ ++ FE I E+ R +FLD+A +++ Sbjct: 309 GLPQP--------DLVLLMLLDVEKCSNRDTFGVERFE--TNSIQERARALFLDLANKDE 358 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + VD+ + + V T I+NIV+ +V++ Sbjct: 359 KNVWIKVDARGTIEEVQTKIINIVYNIVEE 388 >gi|167042320|gb|ABZ07049.1| putative Thymidylate kinase [uncultured marine crenarchaeote HF4000_ANIW97J3] Length = 292 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 20/209 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFG 63 L I+ EG++ AGK T +L + L+R V P T + ++ L G F Sbjct: 101 LIIAIEGLDQAGKKTQTEMLVKALRRIKIKTAVFSFPDYSTIIGKEIKNHL--SGKRNFP 158 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++AA RL+ +E I+ A + +L+ +R+ S+ Y G + + +L L+E Sbjct: 159 PEIIHYLYAANRLEKLEE-IQKASSKNSVLVMNRYYHSNLVY-GIANGLKEKWLQKLEE- 215 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 D I+LD D R +++ D FE+ + +K +I+ +A+ Sbjct: 216 --GLPKADLVIVLDASQDDSFSRKKSKR--------DRFEK-NKNFSKKISRIYRRLAKK 264 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 R +V S+ + Q+ I+ I+ + + Sbjct: 265 H--RWKMV-SSDTKQNTHKEIMKIISKKI 290 >gi|15827333|ref|NP_301596.1| thymidylate kinase [Mycobacterium leprae TN] gi|221229811|ref|YP_002503227.1| thymidylate kinase [Mycobacterium leprae Br4923] gi|13092882|emb|CAC30281.1| putative thymidylate kinase [Mycobacterium leprae] gi|219932918|emb|CAR70866.1| putative thymidylate kinase [Mycobacterium leprae Br4923] Length = 210 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 80/199 (40%), Gaps = 11/199 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVDEF- 62 + I+ EG++GAGK T L++ + V P A L + Sbjct: 1 MLIAIEGVDGAGKRTLSEELRQAFEATGKSVATLAFPRYRQSVAADIAAEALHGQHGDLA 60 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 A A++FA R VE+ I I++ DR++ S+ AY R + Sbjct: 61 SSVYAMALLFAFDRAGAVED-IEALDRNHDIVILDRYVASNAAYSAARLHEDCSGRAVAW 119 Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +Q I Q + PD ++L + V++ KR + R D +ER D + ++ + Sbjct: 120 VQRIEYQRLRLPSPDWQVLLAVSVELAGKRSRYRARTDPDRLRDSYER-DDGLQQRTGAV 178 Query: 177 FLDIARNQ-PDRCHIVDSA 194 + +A R +VD+ Sbjct: 179 YAGLAAADWGGRWLVVDAD 197 >gi|157865253|ref|XP_001681334.1| thymidylate kinase-like protein [Leishmania major] gi|68124630|emb|CAJ02337.1| thymidylate kinase-like protein [Leishmania major strain Friedlin] Length = 363 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 82/219 (37%), Gaps = 19/219 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVL--LSCGVDEFG 63 I EG +GAGK T LL R + +VH P R VL + E Sbjct: 141 IVVEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGKKGPISELN 200 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121 + + +++ R + L G ++ DR+ +++ +Q + + F+ L+ Sbjct: 201 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 259 Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + LDLP + L+ ++ + + LD E E+ RQ + Sbjct: 260 FMEVEWLGLPRATYVLYLDLPPAVALEAMRQDATRK---QLDIHETAGSDYKERVRQTYR 316 Query: 179 DIARNQPDRCHIV-----DSAH-SFQSVATNILNIVWEL 211 + P H + D + + V +I + + + Sbjct: 317 WCCEHLPG-WHHIECFSDDGRRLTREEVHASITSHLRDA 354 >gi|17158497|ref|NP_477917.1| wsv395 [Shrimp white spot syndrome virus] gi|17016791|gb|AAL33397.1| wsv395 [shrimp white spot syndrome virus] Length = 398 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 87/210 (41%), Gaps = 16/210 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + EG + GK+T LL Y P + + L+ ++ Sbjct: 204 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIE-LDDH 262 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A ++F+A R + V + I+ L +G ++ DR+ S + R ++ Sbjct: 263 AAHLLFSANRWE-VCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVD---TVEWCSASDE 318 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA-RNQ 184 P + + + + S R++ ++ FE I E+ R +FLD+A +++ Sbjct: 319 GLPQP--------DLVLLMLLDVEKCSNRDTFGVERFE--TNSIQERARALFLDLANKDE 368 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + VD+ + + V T I+NIV+ +V++ Sbjct: 369 KNVWIKVDARGTIEEVQTKIINIVYNIVEE 398 >gi|68486049|ref|XP_713041.1| hypothetical protein CaO19.8730 [Candida albicans SC5314] gi|68486114|ref|XP_713007.1| hypothetical protein CaO19.1137 [Candida albicans SC5314] gi|46434470|gb|EAK93878.1| hypothetical protein CaO19.1137 [Candida albicans SC5314] gi|46434509|gb|EAK93916.1| hypothetical protein CaO19.8730 [Candida albicans SC5314] gi|238878423|gb|EEQ42061.1| thymidylate kinase [Candida albicans WO-1] Length = 224 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 50/227 (22%), Positives = 83/227 (36%), Gaps = 37/227 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 M G I EG++ +GK+T S+L L + + P TP + L + Sbjct: 1 MARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSF 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117 +A ++F+A R + + I+ L +G ++ DR++ S AY ++ + Sbjct: 57 T-LSDQAAHLLFSANRWE-LSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQ 114 Query: 118 ----DSLQEISVQEVMPDCTIILDLPVDIGL---------KRVQNRYSLRESACLDYFER 164 L I D L L D GL S R+ + +E Sbjct: 115 GKNKQQLNNI-------D---WL-LSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYEL 163 Query: 165 KDVMIHEKRRQIFLDIARNQPD-RCHIVD-SAHSFQSVATNILNIVW 209 + K +Q FL+I D IVD + V T + I+ Sbjct: 164 Q--QFQAKVKQCFLEILDTNKDPTIRIVDVGGKTIDQVTTQLWEIIE 208 >gi|262038965|ref|ZP_06012303.1| dTMP kinase [Leptotrichia goodfellowii F0264] gi|261747019|gb|EEY34520.1| dTMP kinase [Leptotrichia goodfellowii F0264] Length = 156 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 61/154 (39%), Gaps = 12/154 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNYD-VHVTREPGGTPAAEAARHVLLSCG--- 58 G I EG +G+GK T L+ + L + K + + P A + L+ Sbjct: 2 GKLIIIEGTDGSGKQTQTELIYKRLCELKGKEKIKKISFPNYESKASEPVKMYLAGEFGK 61 Query: 59 -VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQH 114 VD A A ++ ++ R + G I++ DR+ S+ +Q + + Sbjct: 62 RVDSVNAYAASLFYSVDRYASFKKDWEDFYNNGGIIVSDRYTTSNMVHQAPKIGNEKERE 121 Query: 115 LFLDSLQEIS---VQEVMPDCTIILDLPVDIGLK 145 +L+ L ++ + PD LD+P + K Sbjct: 122 KYLEWLVDLEWEKMPIPEPDLVFFLDVPFEFSQK 155 >gi|15078963|ref|NP_149714.1| 251L [Invertebrate iridescent virus 6] gi|82012170|sp|Q91FS1|KTHY_IIV6 RecName: Full=Putative thymidylate kinase 251L; AltName: Full=dTMP kinase gi|15042332|gb|AAK82112.1|AF303741_251 251L [Invertebrate iridescent virus 6] Length = 213 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 18/210 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I FEG + GK+T LL L++KN +V + P T L + Sbjct: 12 TRGLLIVFEGCDKTGKSTQCKLLFEELKQKNIEVRMINFPNRTTQTGKLIDQYLKGKIY- 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E I+F+ R + + + I+ ++ G ++ DR+ S A+ + L + Sbjct: 71 LSDEDIHILFSKNRWE-IIDTIKTNILNGITVIIDRYSYSGIAFSVAKG----LDFQWCK 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD I L G + R + +ER + I +K ++ + + Sbjct: 126 QTENGLLKPDIIIYL-----TGQ---TKNMASRNGYGSEIYER--IEIQDKVKKCYEKMI 175 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + +++ + I I+ + Sbjct: 176 --EIPLWNKINADQDVLIIKKQIETIIQKF 203 >gi|228905402|ref|ZP_04069357.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] gi|228854222|gb|EEM98925.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] Length = 328 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 21/222 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 I+ EGI+G+GKT +SLL++ L+ K+ +V + P LS + Sbjct: 109 KIIAVEGIDGSGKTVQMSLLEKQLKEKDKNVIIKSFPVYDSFFGKNIGQFLSGNEEVNAN 168 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 ++ ++ +A R + + LL +RF SS YQ R + F+ Sbjct: 169 NVDPKSMSLWYALDRW---KEFENSNYINCDYLLLNRFTLSSAVYQSSRVKPELREEFIQ 225 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRR 174 + E+ + PD I+ DL + K V N+ D +E + I R Sbjct: 226 WIFELEHSQLGLPAPDLYIVFDLNTETSKKNVSNKGFRDYVGEKADVYE-ESADIMSNAR 284 Query: 175 QIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWE 210 I+ D+A+ + I++ + + + ++ ++ + Sbjct: 285 GIYQDLAKKY-NNIVIINCLDENNKMKTPEEINQIVMKVIED 325 >gi|218906650|ref|YP_002454484.1| thymidylate kinase, putative [Bacillus cereus AH820] gi|218535113|gb|ACK87511.1| thymidylate kinase, putative [Bacillus cereus AH820] Length = 328 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 87/222 (39%), Gaps = 21/222 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD---- 60 I+ EGI+G+GKT +SLL+ L+ K+ V + P LS + Sbjct: 109 KIIAVEGIDGSGKTVQMSLLEEQLKEKDKQVIIKSFPVYDSFFGKNIGQFLSGNEEVNAN 168 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 ++ ++ +A R + + LL +RF SS YQ R + F+ Sbjct: 169 NVDPKSMSLWYALDRW---KEFENFNYINYDYLLLNRFTLSSAVYQSSRVEPELREEFIQ 225 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRR 174 + E+ + PD I+ DL + K V N+ D +E + I R Sbjct: 226 WIFELEHSQLGLPSPDLYIVFDLNAETSKKNVSNKGFRDYVGEKADVYE-ESADIMSNAR 284 Query: 175 QIFLDIARNQPDRCHIVDS------AHSFQSVATNILNIVWE 210 I+ D+A+ + I++ + + + ++ ++ + Sbjct: 285 GIYQDLAKKY-NNIVIINCLDENNKMKTPEEINQIVMKVIED 325 >gi|260577914|ref|ZP_05845844.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734] gi|258603934|gb|EEW17181.1| thymidylate kinase [Corynebacterium jeikeium ATCC 43734] Length = 216 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 15/218 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62 + +SFEG++GAGK T ++ +++ L + V P + A AR L D Sbjct: 1 MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60 Query: 63 GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117 + A +FA R + + + +G ++L DR+ S+ AY R ++ Sbjct: 61 HSVHGMATLFALDRAE-IGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGEWV 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L++ + PD I++D+ ++ +R ++R + ++ D +ER D + E+ + Sbjct: 120 TQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVCAY 178 Query: 178 LDIARNQ---PDRCHIVDSAH-SFQSVATNILNIVWEL 211 +A Q P VDS +++ A + +++ E+ Sbjct: 179 RALAEQQWLSP--WVTVDSTGDDYEARAAKVADLLEEM 214 >gi|146078976|ref|XP_001463654.1| thymidylate kinase-like protein [Leishmania infantum JPCM5] gi|134067741|emb|CAM66020.1| thymidylate kinase-like protein [Leishmania infantum JPCM5] gi|322497056|emb|CBZ32126.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 363 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 81/219 (36%), Gaps = 19/219 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63 I EG +GAGK T LL R + +VH P +LS + E Sbjct: 141 IVIEGGDGAGKETQTGLLVRRVHAAGDEVHALDFPNEKGLYGGLVRAVLSGRKGSISELN 200 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121 + + +++ R + L G ++ DR+ +++ +Q + + F+ L+ Sbjct: 201 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 259 Query: 122 EIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + LDLP L+ R S R+ LD E E+ RQ + Sbjct: 260 FMEVEWLGLPRATYVLYLDLPPAAALE-AMRRDSTRKQ--LDIHETAGSDYKERVRQTYR 316 Query: 179 DIARNQPDRCHIV-----DSAH-SFQSVATNILNIVWEL 211 + P H + D + + V +I + + + Sbjct: 317 WCCEHLPG-WHHIECFDDDGRRLTREEVHASITSHLRDA 354 >gi|203288221|ref|YP_002223236.1| thymidylate kinase [Borrelia recurrentis A1] gi|201085441|gb|ACH95015.1| thymidylate kinase [Borrelia recurrentis A1] Length = 202 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 26/212 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L++ K H T+EP + R L + Sbjct: 8 FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFKN-PLRKV 65 Query: 66 AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A ++ A R +H+ N+ I L + + ++ DR+L SS AYQGE Sbjct: 66 SLAHLYVADRYEHLYNIQNGIITILNKNQTKVISDRYLFSSIAYQGELG----------Y 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ +P+ + +I KR+Q + D FE ++ E ++++ Sbjct: 116 KLNKDFPLPEKLFFIKTDPNIAFKRIQKNRT-----QADIFEFEEAKFKE-INSRYMEMF 169 Query: 182 RNQPDRCHIVD----SAHSFQSVATNILNIVW 209 + IV S H + A I +++ Sbjct: 170 QIFNQLIDIVYIENSSEHDLEISARKIFDLIK 201 >gi|322489068|emb|CBZ24317.1| thymidylate kinase-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 362 Score = 114 bits (287), Expect = 7e-24, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 88/227 (38%), Gaps = 19/227 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---VDEFG 63 I EG +GAGK T LL R + +VH P LLS + E Sbjct: 140 IVIEGGDGAGKETQTGLLVRRVHAAGDEVHSLDFPNEKALYGGLVRALLSGKKGSISELD 199 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121 + + +++ R + L G ++ DR+ +++ +Q + + F+ L+ Sbjct: 200 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 258 Query: 122 EISVQEV-MPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + V+ + +P T + LDLP L+ R + R+ LD E E+ RQ + Sbjct: 259 FMEVEWLGLPRATSVLYLDLPPAAALE-AMRRDAARKQ--LDIHETAGSDYKERVRQTYR 315 Query: 179 DIARNQPDRCHIVDS------AHSFQSVATNILNIVWELVQKRVSPL 219 + P H +D + + V +I + + + + L Sbjct: 316 WCCEHLPG-WHHIDCFGDGGRRLTREEVHGSITSHLRNAGSRAIGAL 361 >gi|68536724|ref|YP_251429.1| thymidylate kinase [Corynebacterium jeikeium K411] gi|68264323|emb|CAI37811.1| tmk [Corynebacterium jeikeium K411] Length = 216 Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 15/218 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62 + +SFEG++GAGK T ++ +++ L + V P + A AR L D Sbjct: 1 MIVSFEGVDGAGKNTLVTAVEKELVEREVPVARIAFPRYEESHPAMLAREALHENLGDLI 60 Query: 63 GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----HLFL 117 + A +FA R + + + +G ++L DR+ S+ AY R ++ Sbjct: 61 HSVHGMAALFALDRAE-IGADLAGFDADGYVILIDRYTASNVAYSAARVGGDVAEVGEWV 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L++ + PD I++D+ ++ +R ++R + ++ D +ER D + E+ + Sbjct: 120 TQLEQEKLGIPAPDLQILVDVEAEVAGQRAESREAQDQTRARDAYER-DSSLQERTVCAY 178 Query: 178 LDIARNQ---PDRCHIVDSAH-SFQSVATNILNIVWEL 211 +A Q P VDS +++ A + +++ E+ Sbjct: 179 RALAEQQWLSP--WVTVDSTGDDYEARAAKVADLLEEM 214 >gi|291531126|emb|CBK96711.1| thymidylate kinase [Eubacterium siraeum 70/3] Length = 222 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 80/219 (36%), Gaps = 21/219 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG----V 59 G EG++G GK+T + +LK + ++ P A+ LS Sbjct: 9 GKLFVIEGLDGCGKSTQLEMLKA---SADSNIRFISFPNYNSASGEIIKDYLSGKFCEEN 65 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFL 117 GA +A R + GK ++ R+ S+ YQ + +L Sbjct: 66 GRTGAYTAGSFYAIDRYISYKTDWEKDYKAGKTIIAARYTSSNAIYQMAKLEKSQWDEYL 125 Query: 118 DSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L++ + P+ + LD+PV++ K + RY E A D E +V + R Sbjct: 126 EWLEDYEYDKFAIPRPERIVFLDMPVEVSQKLLSARYGGDE-AKKDIHES-NVAFLKACR 183 Query: 175 QIFLDIARNQPDRCHIV---DSAHS--FQSVATNILNIV 208 + + +I+ D + + + + ++ Sbjct: 184 ET--ALYTADKKGWYILPCSDGENPYTPEKINKELSALI 220 >gi|203284688|ref|YP_002222428.1| thymidylate kinase [Borrelia duttonii Ly] gi|201084131|gb|ACH93722.1| thymidylate kinase [Borrelia duttonii Ly] Length = 202 Score = 114 bits (286), Expect = 9e-24, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 26/212 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L++ K H T+EP + R L + Sbjct: 8 FYCIEGIDGSGKTSIIQKLQKICNNK-MKYHFTKEPSTGIIGKLIRKQLTNFKN-PLRKV 65 Query: 66 AEAIVFAAARLDHVENV---IRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A ++ A R +H+ N+ I L + + ++ DR+L SS AYQGE Sbjct: 66 SLAHLYVADRYEHLYNIQNGIIAILNKNQTKVISDRYLFSSIAYQGELG----------Y 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ +P+ + +I KR+Q + D FE ++ E ++++ Sbjct: 116 KLNKDFPLPEKLFFIKTDPNIAFKRIQKNRT-----QADLFEFEEAKFKE-INSRYMEMF 169 Query: 182 RNQPDRCHIVD----SAHSFQSVATNILNIVW 209 + IV S H + A I +++ Sbjct: 170 QIFNQLIDIVYIENSSEHDLEISARKIFDLIK 201 >gi|167753463|ref|ZP_02425590.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216] gi|167658088|gb|EDS02218.1| hypothetical protein ALIPUT_01737 [Alistipes putredinis DSM 17216] Length = 225 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 88/226 (38%), Gaps = 21/226 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLS--CGVD 60 + I EG++GAGK+T + L++R ++ + H P E L VD Sbjct: 1 MLIVLEGLDGAGKSTQVELVRRMFAQEGVESHFLHFPRFDAPVYGELIARFLRGELGAVD 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQH 114 + A++FA R D + R L G ++ DR++ S+ +Q G+R Sbjct: 61 KVDPYLVALLFAGDRADAAAQL-RCWLDAGHAVVLDRYVYSNVGFQCAKLPAGDRQEELR 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN--RYSLRESACLDY-FERKDVMIHE 171 ++ L+ PD ++ LD+P K++ RE + + + Sbjct: 120 RWILDLEFGYYGIPRPDVSLFLDVPFAFTEKKLSEVREGDDREYLKGERDIHEASLDLQR 179 Query: 172 KRRQIFLDIARNQPDRCHIVDSA------HSFQSVATNILNIVWEL 211 + R+++ A DR I+D + S ++ I + Sbjct: 180 RVREVYRAAAAAD-DRLRIIDCSDAQGGMDSPNAIFARIRTEIERF 224 >gi|258611590|ref|ZP_05233832.2| thymidylate kinase [Listeria monocytogenes FSL N3-165] gi|258601555|gb|EEW14880.1| thymidylate kinase [Listeria monocytogenes FSL N3-165] Length = 111 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 4/114 (3%) Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 +DSS AYQG + + ++++ +PD T LD+P ++GL R+ + Sbjct: 1 MDSSLAYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAAN----KGRE 56 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ +++D+ HEK + + + P+R VD+ + + + IL + + Sbjct: 57 VNRLDKEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQL 110 >gi|257057529|ref|YP_003135361.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] gi|256587401|gb|ACU98534.1| thymidylate kinase [Saccharomonospora viridis DSM 43017] Length = 642 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 20/223 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +GL I EG A + L ++L + V + +P A + R L G Sbjct: 439 NGLLIVLEGTTAADTAAQAAHLAQWLGSGSQRVVLAADP----ALDDERLTSLMSGAALT 494 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 GA A+A+ AA R D VE +RPAL EG I++ +RF+D+ A+ L+ L + Sbjct: 495 GARAKALAAAAVRADIVERNVRPALDEGAIVVMERFVDTPLAHLSAMAGLDATELEGLTD 554 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD T++LD ++ + H + ++I ++A Sbjct: 555 WATGALRPDLTVLLDADPGEASEQSTS----------------TAEHHWRVQEILAEMAA 598 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 + PDR +VD+ + VA + V E + +V+ + +++ Sbjct: 599 SAPDRYVVVDAEGTEAEVAERVRVSVSEALSGKVALPPTTQEV 641 >gi|300857934|ref|YP_003782917.1| thymidylate kinase [Corynebacterium pseudotuberculosis FRC41] gi|300685388|gb|ADK28310.1| Thymidylate kinase [Corynebacterium pseudotuberculosis FRC41] gi|302205663|gb|ADL10005.1| thymidylate kinase [Corynebacterium pseudotuberculosis C231] gi|302330214|gb|ADL20408.1| thymidylate kinase [Corynebacterium pseudotuberculosis 1002] Length = 206 Score = 113 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 80/207 (38%), Gaps = 7/207 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGK T + L L + R A A + + G Sbjct: 1 MIIAIEGIDGAGKNTLVRALVEKLDARVLG--FPRYQDSIHAHLAQKALYQEMGDVSDSI 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122 A A++FA R + + +R ++L DR++ S+ AY R D + ++ L+ Sbjct: 59 YAMALLFALDRRE-IAEELRSYKGSEDVILLDRYVSSNAAYSAARAQDWNLVAWVSHLEF 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD ++L+ ++ +R R + D +E D + + + +A Sbjct: 118 EEFGLPTPDIQVLLNTSPEVAAQRAAKREEQDQDRSRDCYE-TDSSLQVRTSDAYARLAE 176 Query: 183 NQP-DRCHIVDSAHSFQSVATNILNIV 208 + + S VA I+ + Sbjct: 177 EKRFSPWIVAQPGDSVDDVALKIIQTL 203 >gi|321456428|gb|EFX67536.1| hypothetical protein DAPPUDRAFT_63855 [Daphnia pulex] Length = 195 Score = 113 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 19/191 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G I E + +GK T +K +LQ N + H+ R P + A + Sbjct: 2 IKRGALIVLERCDRSGKPTQCQKVKHLWLQESNKEAHLMRFPDEIVCDQPAISSYICYAK 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + G E +F +ARL + I+ L +G ++ DR+ S A+ + ++ L Sbjct: 62 PKDGTATE--LFTSARLLSIRPDIKKLLQKGTNVIVDRYSYSGIAFSAAK---PNMDLRW 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 Q+ + PD I LD+ R + +E ++ + + R +L Sbjct: 117 CQQSDSGLLKPDLVIFLDIDPVEA--------ETRGQYGSERYE--NLEMQKVVRSNYLK 166 Query: 180 IARNQPDRCHI 190 + Q + + Sbjct: 167 L---QDESWRV 174 >gi|227505511|ref|ZP_03935560.1| thymidylate kinase [Corynebacterium striatum ATCC 6940] gi|227197875|gb|EEI77923.1| thymidylate kinase [Corynebacterium striatum ATCC 6940] Length = 204 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T + +K+ L + + R A A + G A Sbjct: 1 MLISIEGIDGAGKNTLVQRIKKELSVEVNVLGFPRYEESVHAQLAQDALYGRMGDLTDSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +FA RL + + A +L+ DR++ S+ AY R + +D + ++ Sbjct: 61 FAMATLFALDRLG-AKERLLAAQESKDLLILDRYVASNAAYSAARLGTD-EVIDWVFDLE 118 Query: 125 VQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 P I LD V++ R +R + D +E+ D + + +A Sbjct: 119 FGRFGLPKPQLQIFLDTDVELAAARATSRAEEDSTRVRDRYEK-DSTLQANTAAAYRRLA 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + I + + ++ +V E Sbjct: 178 ERKWGGQWI--ATADTDMIVQSVKKLVEE 204 >gi|315918331|ref|ZP_07914571.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563] gi|313692206|gb|EFS29041.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563] Length = 226 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 29/231 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57 N G I EG + +GK T LL P A + L+ Sbjct: 4 NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGL 63 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH-- 114 ++ + ++A R + + + + + DR++ S+ +Q + + Sbjct: 64 NAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKE 123 Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++L++L+ + PDC I LD+P + ++ R + ++ IHE Sbjct: 124 EYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHE 176 Query: 172 KRRQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211 + R+ +L ++A R VD S Q + IL V E+ Sbjct: 177 RNRE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 226 >gi|300932844|ref|ZP_07148100.1| thymidylate kinase [Corynebacterium resistens DSM 45100] Length = 220 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 10/218 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62 + I+FEG++GAGK T +S ++ L + V P + A+ A+ L D Sbjct: 1 MIIAFEGVDGAGKNTLVSAVEAELLAREIPVARVGFPRYEQSVHAQLAQAALYGQMGDLL 60 Query: 63 GAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 + A +FA R + V + +G ++L DRF+ S+ AY R S ++ Sbjct: 61 DSIHGMATMFALDRAE-VAEDLASFSEDGYVVLLDRFVASNAAYSTARLGSDSVADWVYG 119 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ S+ +PD +++D+ + +RV +R S D +E D + + D Sbjct: 120 LEFDSLGSPLPDLQVLVDVDATVAQQRVAHRADEDSSRAQDRYEA-DSQLQVDTVAAYRD 178 Query: 180 IARNQ-PDRCHIV--DSAHSFQSVATNILNIVWELVQK 214 +A ++ D + A +++ + + Sbjct: 179 LAARNWASEWLVMNFDHGADVKQCAQQVVDTIVATLAD 216 >gi|288919199|ref|ZP_06413537.1| thymidylate kinase [Frankia sp. EUN1f] gi|288349446|gb|EFC83685.1| thymidylate kinase [Frankia sp. EUN1f] Length = 223 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 16/191 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVLLSCGVDEF 62 + ++ EG++GAGK T S L L P T P A R +L G + Sbjct: 1 MIVAIEGVDGAGKHTLTSRLVEALTAAGRTAATFSFPRYTAGPLGTAVRAML--DGDERL 58 Query: 63 -----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSS 112 A A A++FA R + + + A E +LL DR+L S+ AY R Sbjct: 59 AGVAGSARATALLFALDRANALPELAARA-AEHDVLLVDRYLASNAAYGAARLPADERPD 117 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 ++ L+ +++ PD ++LD+PV+ + R + + LD FER D + E+ Sbjct: 118 FLAWIAELELTALRLPRPDLQVLLDVPVETARAAARQRAAGDATRALDTFER-DEGLQER 176 Query: 173 RRQIFLDIARN 183 I+ +A + Sbjct: 177 CAGIYRHLAAD 187 >gi|3493131|gb|AAC33288.1| thymidylate kinase [Arabidopsis thaliana] Length = 188 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 65/170 (38%), Gaps = 16/170 (9%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++ +GK+T + L FL + + R P + LS + ++ Sbjct: 2 GLDRSGKSTQCAKLLSFLNGLGHPTELWRFPDRETSVGQMISAYLSNK-SQLDDHTIHLL 60 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 F+A R + +++ L G L+ DR+ S A+ + L ++ + + + P Sbjct: 61 FSANRWE-KRSLMEEKLKTGTTLIVDRYSYSGVAFSSAKG----LDIEWCKAPEIGLLAP 115 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 D + LD+ + +R + +ER V +K + + Sbjct: 116 DSVLYLDISPERAAER--------GGYGDERYER--VEFQKKVADFYQTL 155 >gi|227832501|ref|YP_002834208.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] gi|262183633|ref|ZP_06043054.1| thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] gi|227453517|gb|ACP32270.1| Thymidylate kinase [Corynebacterium aurimucosum ATCC 700975] Length = 206 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 51/216 (23%), Positives = 80/216 (37%), Gaps = 15/216 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T L+ L + R A A + G Sbjct: 1 MLISIEGIDGAGKNTITQRLREELACDVEVLSFPRYEDSIHAQLAQEALYGRMGDLTDSV 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A +FA R E ++ A +L+ DR++ S+ AY L +D + E+ Sbjct: 61 YGMATLFALDRRGAKEQLLAAAESTDSLLILDRYVASNAAYSSA-RVGGELIVDWIYELE 119 Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +P I LD V + +R R + E D +ER D + + + +A Sbjct: 120 FERFGLPVPQLQIFLDTDVALAGQRAVARAAEDEGRNRDRYER-DAALQSRTAAAYRRLA 178 Query: 182 RNQ--PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 Q D+ I+ V ELV ++ Sbjct: 179 EQQWAGQWIATADADM--------IIQAVKELVGEQ 206 >gi|39939007|ref|NP_950773.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|39722116|dbj|BAD04606.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 204 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 84/215 (39%), Gaps = 21/215 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEGI+G+GKT+ I L+ L+ + + G + + R + L+ + Sbjct: 3 KLIVFEGIDGSGKTSLIHALQPLLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE----RDSSQHLFLDSL 120 + A + + ++++ DR+L S+YAYQ +L L + Sbjct: 58 LTRFYLSLANMAQIQVELFK----NKQLIILDRWLPSTYAYQLFPFFKEKKLTNLPLKQI 113 Query: 121 QEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 I+ + + PD I L++ IG R + + S + D ERK + + Q + Sbjct: 114 FNINHETILKKPDLLIYLEIDPQIGKTRKKKQKSHQR----DLIERKSLTYFQTVCQGYK 169 Query: 179 DIARNQPDRCH--IVDSAHSFQSVATNILNIVWEL 211 + I++ S I+ + E+ Sbjct: 170 HYLTHYTRDIKQLILNGTDHIPSNIQKIMKYLGEI 204 >gi|226468432|emb|CAX69893.1| deoxythymidylate kinase (thymidylate kinase) [Schistosoma japonicum] Length = 238 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 86/236 (36%), Gaps = 32/236 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G+F+ EG + GKTT SLL + L + + V TP L G Sbjct: 6 SRGIFVVLEGADRVGKTTQASLLAKALSEITQKKTLSVKFPNRDTPLGHQLDAYL--GGN 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + A ++F A R + IR A+ G ++ DR++ S AY + + + Sbjct: 64 GDINSHALHLLFTANRWEKQSE-IRNAISNGISVVADRYIYSGIAYTAAKLPPTPNW-EW 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 E+ + D I L + + + R + +E+ ++ + ++ Sbjct: 122 CCEMEKGLLEADLVICL--TPENL-----DELNSRNGYGNECYEK--DDFQKRVLENYVR 172 Query: 180 IARN----QPDR------------CHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218 +++ + H + + + + V I+ +V ++ P Sbjct: 173 LSKEVELDNSEWQNNDETGDSVGLWHFIQATNKTVEEVHKCIMVLVKSKLESISGP 228 >gi|291009673|ref|ZP_06567646.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] Length = 214 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 13/197 (6%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVD- 60 G I EG++GAGK T L L R+ V P AE L D Sbjct: 2 GRLIVIEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAELVAEALRGGHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118 A+++A R + +R L ++L DR++ S+ AY R F+ Sbjct: 62 GDSVHGMAVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDFVA 120 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +E+ ++ PD ++L +P ++ R +R D FE D + E+ + Sbjct: 121 WTEELEIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFES-DASLQERCGE 179 Query: 176 IFLDIARNQ---PDRCH 189 ++ +A P R Sbjct: 180 VYAQLAERNWWSPWRVV 196 >gi|257467201|ref|ZP_05631512.1| thymidylate kinase [Fusobacterium gonidiaformans ATCC 25563] Length = 222 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 29/229 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGLNA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH---- 114 ++ + ++A R + + + + + DR++ S+ +Q + + Sbjct: 62 EKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKEEY 121 Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++L++L+ + PDC I LD+P + ++ R + ++ IHE+ Sbjct: 122 LIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHERN 174 Query: 174 RQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211 R+ +L ++A R VD S Q + IL V E+ Sbjct: 175 RE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIQNEILEKVREI 222 >gi|4974|emb|CAA46698.1| thymidylate kinase [Schizosaccharomyces pombe] Length = 210 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 79/212 (37%), Gaps = 23/212 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVD 60 N G I EG++ +GK+T LL L + + + P T + L Sbjct: 5 NRGRLIVIEGLDRSGKSTQCQLLVDKLILNMKRLKLFKFPDRTTAIGKKIDDYL--TESV 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++F+A R + ++ A + + DR+ S A+ + L + Sbjct: 63 QLNDQVIHLLFSANRWE--PSIYYRANQQRCNCILDRYAFSGIAFSAAKG----LDWEWC 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L++ I R + +E+ + + EK + + Sbjct: 117 KSPDRGLTRPDLVIFLNVDPRIAATR--------GQYGEERYEK--IEMQEKVLKNLQRL 166 Query: 181 ARNQPD---RCHIVDSAH-SFQSVATNILNIV 208 + + +D++ + + V + I+++V Sbjct: 167 QKEFREEGLEFITLDASSYALEDVDSQIVDLV 198 >gi|241950051|ref|XP_002417748.1| dTMP kinase, putative; thymidylate kinase, putative [Candida dubliniensis CD36] gi|223641086|emb|CAX45461.1| dTMP kinase, putative [Candida dubliniensis CD36] Length = 224 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 50/239 (20%), Positives = 87/239 (36%), Gaps = 42/239 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 M G I EG++ +GK+T S+L L + + P TP + L + Sbjct: 1 MARGQLILIEGLDRSGKSTQASILSTKLS----PSKLIKFPDRSTPIGKLINEYLTNKSF 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117 ++ ++F+A R + + I+ L +G ++ DR++ S AY ++ + Sbjct: 57 T-LSDQSAHLLFSANRWE-LSQQIQDLLNQGYFIILDRYIYSGIAYTLAKNDFHDETISQ 114 Query: 118 ----DSLQEISVQEVMPDCTIILDLPVDIGL---------KRVQNRYSLRESACLDYFER 164 L + D L L D GL S R+ + +E Sbjct: 115 GKNKQQLNNV-------D---WL-LSPDKGLPKPDLTLFLTLDLEEISKRKGWGDERYEL 163 Query: 165 KDVMIHEKRRQIFLDIARNQPD-RCHIVD-SAHSFQSVATNILNIVW-----ELVQKRV 216 + K +Q FL+I D IVD + V T + I+ EL+ + Sbjct: 164 Q--QFQAKVKQCFLEILDTNDDPTIRIVDVGGKTIDQVTTQLWEIIETNKNHELINDAI 220 >gi|284992962|ref|YP_003411516.1| major facilitator superfamily protein [Geodermatophilus obscurus DSM 43160] gi|284066207|gb|ADB77145.1| major facilitator superfamily MFS_1 [Geodermatophilus obscurus DSM 43160] Length = 727 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 84/234 (35%), Gaps = 43/234 (18%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL-------- 55 GLFI EG + + + L + L+ V VT EP T R +L Sbjct: 482 GLFIVVEGADRELTRRYAADLAQVLRDCGCPVEVTSEPSDTQLGRQVRGLLFPPPPGSGT 541 Query: 56 ---------SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 GA A++ AA R HV VIRPAL ++++ ++D+S A+ Sbjct: 542 GFPQPEPAVDDTGSPIGAHTAALLAAADRAQHVAAVIRPALERRRVVVNTHYVDTSIAFH 601 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 G + + + ++PD T+++D PV Sbjct: 602 GAGQGLDADRIFRTSLWATRGLLPDLTVVVDSPVTSAPADADA----------------- 644 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELVQKR 215 E R+ FL A PDR +V D+ V+ + + LV R Sbjct: 645 ----EAVRRAFLAQAEAAPDRYVVVPGELLDTDGEEGMVSPVVRRRLATLVATR 694 >gi|215428729|ref|ZP_03426648.1| thymidylate kinase [Mycobacterium tuberculosis T92] gi|289751941|ref|ZP_06511319.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92] gi|289692528|gb|EFD59957.1| thymidylate kinase tmk [Mycobacterium tuberculosis T92] Length = 214 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 11/196 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEF- 62 + I+ EG++GAGK T + L + V P G A L + Sbjct: 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116 A A +FA R V I+ +++ DR++ S+ AY R + Sbjct: 61 SSVYAMATLFALDRAGAVHT-IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAW 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + ++ + PD ++L + ++ +R + R D +ER D + ++ + Sbjct: 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGAV 178 Query: 177 FLDIARN-QPDRCHIV 191 + ++A R +V Sbjct: 179 YAELAAQGWGGRWLVV 194 >gi|15610383|ref|NP_217764.1| thymidylate kinase [Mycobacterium tuberculosis H37Rv] gi|15842836|ref|NP_337873.1| thymidylate kinase [Mycobacterium tuberculosis CDC1551] gi|31794427|ref|NP_856920.1| thymidylate kinase [Mycobacterium bovis AF2122/97] gi|121639136|ref|YP_979360.1| thymidylate kinase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148663110|ref|YP_001284633.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra] gi|148824449|ref|YP_001289203.1| thymidylate kinase [Mycobacterium tuberculosis F11] gi|167966685|ref|ZP_02548962.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra] gi|215405259|ref|ZP_03417440.1| thymidylate kinase [Mycobacterium tuberculosis 02_1987] gi|215413125|ref|ZP_03421826.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A] gi|215432211|ref|ZP_03430130.1| thymidylate kinase [Mycobacterium tuberculosis EAS054] gi|215447550|ref|ZP_03434302.1| thymidylate kinase [Mycobacterium tuberculosis T85] gi|218755033|ref|ZP_03533829.1| thymidylate kinase [Mycobacterium tuberculosis GM 1503] gi|219559306|ref|ZP_03538382.1| thymidylate kinase [Mycobacterium tuberculosis T17] gi|224991629|ref|YP_002646318.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172] gi|253800289|ref|YP_003033290.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435] gi|254365871|ref|ZP_04981916.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem] gi|254552350|ref|ZP_05142797.1| thymidylate kinase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260188295|ref|ZP_05765769.1| thymidylate kinase [Mycobacterium tuberculosis CPHL_A] gi|260202408|ref|ZP_05769899.1| thymidylate kinase [Mycobacterium tuberculosis T46] gi|260206598|ref|ZP_05774089.1| thymidylate kinase [Mycobacterium tuberculosis K85] gi|289444828|ref|ZP_06434572.1| thymidylate kinase [Mycobacterium tuberculosis T46] gi|289448935|ref|ZP_06438679.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A] gi|289555525|ref|ZP_06444735.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605] gi|289571474|ref|ZP_06451701.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17] gi|289575967|ref|ZP_06456194.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85] gi|289747065|ref|ZP_06506443.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987] gi|289755370|ref|ZP_06514748.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054] gi|289759387|ref|ZP_06518765.1| thymidylate kinase [Mycobacterium tuberculosis T85] gi|289763435|ref|ZP_06522813.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503] gi|294993813|ref|ZP_06799504.1| thymidylate kinase [Mycobacterium tuberculosis 210] gi|297635900|ref|ZP_06953680.1| thymidylate kinase [Mycobacterium tuberculosis KZN 4207] gi|297732897|ref|ZP_06962015.1| thymidylate kinase [Mycobacterium tuberculosis KZN R506] gi|298526723|ref|ZP_07014132.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A] gi|306777576|ref|ZP_07415913.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001] gi|306782297|ref|ZP_07420634.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002] gi|306786119|ref|ZP_07424441.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003] gi|306790487|ref|ZP_07428809.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004] gi|306795008|ref|ZP_07433310.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005] gi|306799206|ref|ZP_07437508.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006] gi|306805054|ref|ZP_07441722.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008] gi|306809240|ref|ZP_07445908.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007] gi|306969343|ref|ZP_07482004.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009] gi|306973695|ref|ZP_07486356.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010] gi|307081404|ref|ZP_07490574.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011] gi|307086008|ref|ZP_07495121.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012] gi|313660229|ref|ZP_07817109.1| thymidylate kinase [Mycobacterium tuberculosis KZN V2475] gi|61213172|sp|O05891|KTHY_MYCTU RecName: Full=Thymidylate kinase; AltName: Full=Thymidine monophosphate kinase; AltName: Full=dTMP kinase; Short=TMPK gi|16975072|pdb|1G3U|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) gi|20149891|pdb|1GSI|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) gi|20149899|pdb|1GTV|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine-5'-Diphosphate (Tdp) gi|20149900|pdb|1GTV|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine-5'-Diphosphate (Tdp) gi|28373781|pdb|1MRN|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Bisubstrate Inhibitor (Tp5a) gi|28373782|pdb|1MRS|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With 5-Ch2oh Deoxyuridine Monophosphate gi|30749563|pdb|1N5I|A Chain A, Crystal Structure Of Inactive Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Monophosphate (Tmp) At Ph 4.6 (Resolution 1.85 A) gi|30749564|pdb|1N5J|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Thymidine Diphosphate (Tdp) And Thymidine Triphosphate (Ttp) At Ph 5.4 (1.85 A Resolution) gi|30749565|pdb|1N5K|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate (Resolution 2.1 A) gi|30749566|pdb|1N5K|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate (Resolution 2.1 A) gi|30749567|pdb|1N5L|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate, After Catalysis In The Crystal (2.3 A Resolution) gi|30749568|pdb|1N5L|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Crystallized In Sodium Malonate, After Catalysis In The Crystal (2.3 A Resolution) gi|60593791|pdb|1W2G|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Deoxythymidine (Dt) (2.1 A Resolution) gi|60593792|pdb|1W2G|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Deoxythymidine (Dt) (2.1 A Resolution) gi|60593793|pdb|1W2H|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Azidothymidine Monophosphate (Azt- Mp) (2.0 A Resolution) gi|60593794|pdb|1W2H|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Azidothymidine Monophosphate (Azt- Mp) (2.0 A Resolution) gi|2072714|emb|CAB08348.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID KINASE) (TMPK) [Mycobacterium tuberculosis H37Rv] gi|13883165|gb|AAK47687.1| thymidylate kinase, putative [Mycobacterium tuberculosis CDC1551] gi|31620023|emb|CAD95367.1| PROBABLE THYMIDYLATE KINASE TMK (dTMP KINASE) (THYMIDYLIC ACID KINASE) (TMPK) [Mycobacterium bovis AF2122/97] gi|121494784|emb|CAL73265.1| Probable thymidylate kinase tmk [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151384|gb|EBA43429.1| thymidylate kinase tmk [Mycobacterium tuberculosis str. Haarlem] gi|148507262|gb|ABQ75071.1| thymidylate kinase [Mycobacterium tuberculosis H37Ra] gi|148722976|gb|ABR07601.1| thymidylate kinase tmk [Mycobacterium tuberculosis F11] gi|224774744|dbj|BAH27550.1| thymidylate kinase [Mycobacterium bovis BCG str. Tokyo 172] gi|253321792|gb|ACT26395.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 1435] gi|289417747|gb|EFD14987.1| thymidylate kinase [Mycobacterium tuberculosis T46] gi|289421893|gb|EFD19094.1| thymidylate kinase tmk [Mycobacterium tuberculosis CPHL_A] gi|289440157|gb|EFD22650.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 605] gi|289540398|gb|EFD44976.1| thymidylate kinase tmk [Mycobacterium tuberculosis K85] gi|289545228|gb|EFD48876.1| thymidylate kinase tmk [Mycobacterium tuberculosis T17] gi|289687593|gb|EFD55081.1| thymidylate kinase tmk [Mycobacterium tuberculosis 02_1987] gi|289695957|gb|EFD63386.1| thymidylate kinase tmk [Mycobacterium tuberculosis EAS054] gi|289710941|gb|EFD74957.1| thymidylate kinase tmk [Mycobacterium tuberculosis GM 1503] gi|289714951|gb|EFD78963.1| thymidylate kinase [Mycobacterium tuberculosis T85] gi|298496517|gb|EFI31811.1| thymidylate kinase [Mycobacterium tuberculosis 94_M4241A] gi|308214118|gb|EFO73517.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu001] gi|308325048|gb|EFP13899.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu002] gi|308329269|gb|EFP18120.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu003] gi|308333100|gb|EFP21951.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu004] gi|308336787|gb|EFP25638.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu005] gi|308340621|gb|EFP29472.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu006] gi|308344562|gb|EFP33413.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu007] gi|308348358|gb|EFP37209.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu008] gi|308353195|gb|EFP42046.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu009] gi|308356935|gb|EFP45786.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu010] gi|308360936|gb|EFP49787.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu011] gi|308364475|gb|EFP53326.1| thymidylate kinase tmk [Mycobacterium tuberculosis SUMu012] gi|323718116|gb|EGB27298.1| thymidylate kinase tmk [Mycobacterium tuberculosis CDC1551A] gi|326902525|gb|EGE49458.1| thymidylate kinase tmk [Mycobacterium tuberculosis W-148] gi|328460024|gb|AEB05447.1| thymidylate kinase tmk [Mycobacterium tuberculosis KZN 4207] Length = 214 Score = 112 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 11/202 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEF- 62 + I+ EG++GAGK T + L + V P G A L + Sbjct: 1 MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLA 60 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116 A A +FA R V I+ +++ DR++ S+ AY R + Sbjct: 61 SSVYAMATLFALDRAGAVHT-IQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAW 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + ++ + PD ++L + ++ +R + R D +ER D + ++ + Sbjct: 120 VQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER-DAELQQRTGAV 178 Query: 177 FLDIARN-QPDRCHIVDSAHSF 197 + ++A R +V + Sbjct: 179 YAELAAQGWGGRWLVVGADVDP 200 >gi|34764303|ref|ZP_00145140.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885923|gb|EAA23262.1| Thymidylate kinase [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 228 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 84/233 (36%), Gaps = 33/233 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLGGTFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNKEKEEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + IHE Sbjct: 122 LRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173 Query: 174 RQIFLD--------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + +L I++ ++ S + + I + + E++Q Sbjct: 174 NEDYLKKSYDNATAISKKY--NWCEIECVENNKIKSIEKINDEIFSKIKEIIQ 224 >gi|308275898|gb|ADO25797.1| thymidylate kinase [Corynebacterium pseudotuberculosis I19] Length = 206 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 7/207 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGK T + L L + ++ A+ + + G Sbjct: 1 MIIAIEGIDGAGKNTLVRALVEKLDARVLGFPRCQDSIHAHLAQ--KALYQEMGDVSDSI 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122 A A++FA R + + +R ++L DR++ S+ AY R D + ++ L+ Sbjct: 59 YAMALLFALDRRE-IAEELRSYKGSEDVILLDRYVSSNAAYSAARAQDWNLVAWVSHLEF 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD ++L+ ++ +R R + D +E D + + + +A Sbjct: 118 EEFGLPTPDIQVLLNTSPEVAAQRAAKREEQDQDRSRDCYE-TDSSLQVRTSDAYARLAE 176 Query: 183 NQP-DRCHIVDSAHSFQSVATNILNIV 208 + + S VA I+ + Sbjct: 177 EKRFSPWIVAQPGDSVDDVALKIIQTL 203 >gi|302563323|ref|NP_001181704.1| thymidylate kinase [Macaca mulatta] Length = 188 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 43/223 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVETLCAAGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + V +I+ L +G L+ DR+ S A+ G + Sbjct: 63 VEDHAVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGVAFTGAK------------ 109 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ L R + + +E + E+ Q F + Sbjct: 110 -------------------ELQLADAAKRGAY----GHERYENR--AFQERALQCFHQLM 144 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 R+ +VD++ S ++V +I + + +K + L Sbjct: 145 RDTTLNWKMVDASKSIEAVHEDIRVLSEDAIHTATEKPLGELW 187 >gi|119953569|ref|YP_945779.1| thymidylate kinase [Borrelia turicatae 91E135] gi|119862340|gb|AAX18108.1| thymidylate kinase [Borrelia turicatae 91E135] Length = 202 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 22/212 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L + L + T+EP E R L + Sbjct: 8 FYCIEGIDGSGKTSIIQKL-QKLCNNKLKYYFTKEPSQGVIGEFIRQQLTNFKN-PLRKV 65 Query: 66 AEAIVFAAARLDHV---ENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A ++ A R +H+ +N I L +GK ++ DR+L SS AYQGE Sbjct: 66 SLAYLYVADRYEHLYNTKNGIIEILNKGKTKVITDRYLFSSIAYQGELG----------Y 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +++ +P+ + I KR+Q D FE + E + ++ Sbjct: 116 KLNKDFPLPEKLFFIKTDPGIAYKRIQ-----ENRIQADLFEFEAAKFKE-INSRYTEML 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + D IV +S + +++L++ Sbjct: 170 KIFDDLIDIVYIENSNEEDLETSTRKIFDLIK 201 >gi|19551980|ref|NP_599982.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|62389641|ref|YP_225043.1| thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|145294916|ref|YP_001137737.1| thymidylate kinase [Corynebacterium glutamicum R] gi|21323519|dbj|BAB98146.1| Thymidylate kinase [Corynebacterium glutamicum ATCC 13032] gi|41324976|emb|CAF19457.1| THYMIDYLATE KINASE, PUTATIVE [Corynebacterium glutamicum ATCC 13032] gi|140844836|dbj|BAF53835.1| hypothetical protein [Corynebacterium glutamicum R] Length = 203 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 15/209 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62 + +S EGI+GAGK T +S L + + K + T L + + Sbjct: 1 MIVSIEGIDGAGKNTLVSALTQVIDAK----VLAFPRYETSIHAQLAAEALHGRMGDLTD 56 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSL 120 A A A +FA R +++ L ++L DR++ S+ AY R ++ L Sbjct: 57 SAYAMATLFALDRHFAIDD-----LNAPGVVLLDRYVASNAAYTAARLLDDDAPRWVADL 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + P ++LD P ++ R + R +L + D +E D + ++ + + + Sbjct: 112 EFGRLGLPRPTLQVLLDTPAEVAQDRARRREALDSARARDRYES-DSALQQRTAEHYRRL 170 Query: 181 ARNQPDR-CHIVDSAHSFQSVATNILNIV 208 A + + +V VA I+ + Sbjct: 171 AADNWESPWIVVAPDEDPGHVAQRIVEFL 199 >gi|317059743|ref|ZP_07924228.1| thymidylate kinase [Fusobacterium sp. 3_1_5R] gi|313685419|gb|EFS22254.1| thymidylate kinase [Fusobacterium sp. 3_1_5R] Length = 226 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 44/231 (19%), Positives = 84/231 (36%), Gaps = 29/231 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---- 57 N G I EG + +GK T LL P A + L+ Sbjct: 4 NMGKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGL 63 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH-- 114 ++ + ++A R + + + + + DR++ S+ +Q + + Sbjct: 64 NAEKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKE 123 Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++L++L+ + PDC I LD+P + ++ R + ++ IHE Sbjct: 124 EYLIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHE 176 Query: 172 KRRQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211 + R+ +L ++A R VD S Q + IL V E+ Sbjct: 177 RNRE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 226 >gi|189502888|gb|ACE06825.1| unknown [Schistosoma japonicum] gi|226488060|emb|CAX75695.1| Thymidylate kinase [Schistosoma japonicum] gi|226488064|emb|CAX75697.1| Thymidylate kinase [Schistosoma japonicum] Length = 224 Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 32/232 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58 + GLF+ FEG+E GK T LL+ L + + P TP + G Sbjct: 5 IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117 + A ++ A R + + I AL G ++ DR+ S AY + Sbjct: 63 KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + + PD I L + S+R+S+ + FE + ++ F Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGGNKFE--TMDFQKRVLTYF 172 Query: 178 LDI----------------ARNQPDRCHIVDSA-HSFQSVATNILNIVWELV 212 + A ++P H + + + + + I+ I+ + Sbjct: 173 GRLSREMESELNENNGDDNAESEPRLWHWIPATGQTVDEIHSCIMAIIDSKL 224 >gi|154333035|ref|XP_001562778.1| thymidylate kinase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134059783|emb|CAM37208.1| thymidylate kinase-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 363 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 87/219 (39%), Gaps = 19/219 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVL--LSCGVDEFG 63 I EG +GAGK T +LL R + +VH P R VL ++E Sbjct: 141 IVVEGGDGAGKETQAALLVRQIHASGGEVHALDFPYERGLYGGLVRTVLSGKKGSINELN 200 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQ 121 + + +++ R + L G ++ DR+ +++ +Q + + F+ L+ Sbjct: 201 PQLFSFLYSLNRFG-CARQLHFWLRRGSSVVLDRYYTANFGHQASKLPPEEREAFISDLE 259 Query: 122 EISVQEV-MPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + V+ +P T + LDLP L+ R + R+ LD E ++ RQ ++ Sbjct: 260 FMEVELFGLPRATSVLYLDLPPAAALE-AMRRDATRKQ--LDIHETAGGDYKKRVRQTYM 316 Query: 179 DIARNQPDRCHIV-----DSAH-SFQSVATNILNIVWEL 211 + P H + D + + V T I + + Sbjct: 317 WCCEHLPG-WHHIMCFGDDGRRLTREEVHTAITRHLRSV 354 >gi|319949855|ref|ZP_08023867.1| thymidylate kinase [Dietzia cinnamea P4] gi|319436480|gb|EFV91588.1| thymidylate kinase [Dietzia cinnamea P4] Length = 222 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 9/183 (4%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EFGAE 65 EG++GAGK T + L L + V P L G Sbjct: 2 VVEGLDGAGKNTLTTRLVAELDARGLSVGRLAFPRYGTLHADLAADALHGGQAGAADSPH 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-----FLDSL 120 A A++FA R ++ + ++L DR++ S+ AY R ++ +L Sbjct: 62 AMALLFALDRHAALDAL-AGLAAAHDVVLLDRYVASNAAYTAARLGPDREDEVIAWIGAL 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + P ++LD PV++ +R R + D +ER D + +++ + Sbjct: 121 EFDRLGLPAPHLQLLLDTPVEVAAERAGTREAADPGRARDRYER-DADLQAATGEVYRRL 179 Query: 181 ARN 183 A Sbjct: 180 AAA 182 >gi|291415048|ref|XP_002723765.1| PREDICTED: thymidylate kinase isoform 2 [Oryctolagus cuniculus] Length = 188 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 39/211 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L+ + + R P + L + Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVAALRAAGHRAELLRFPERSTEIGKLLSSYLEKKSE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V I+ L +G L+ DR+ S A+ + Sbjct: 63 VEDHSVHLLFSANRWEQVP-FIKEKLSQGVTLVVDRYAFSGVAFTSAK------------ 109 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ L +R + +E + E+ Q F + Sbjct: 110 -------------------ELKLAEAASRGEF----GCERYESR--AFQERALQGFHQLM 144 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R+ +VD++ S + V I + + + Sbjct: 145 RDPSLNWKMVDASKSIEDVHEEIRALSEDAI 175 >gi|237742316|ref|ZP_04572797.1| thymidylate kinase [Fusobacterium sp. 4_1_13] gi|229429964|gb|EEO40176.1| thymidylate kinase [Fusobacterium sp. 4_1_13] Length = 228 Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 83/225 (36%), Gaps = 17/225 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGTFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNKEKEEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + + +K Sbjct: 122 LRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181 Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + I++ ++ S + + I + + E++Q Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFSKIKEIIQ 224 >gi|308198161|ref|XP_001387114.2| thymidylate kinase [Scheffersomyces stipitis CBS 6054] gi|149389058|gb|EAZ63091.2| thymidylate kinase [Pichia stipitis CBS 6054] Length = 229 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 37/242 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I EG++ +GK+T ++L L + + + P + + + L+ Sbjct: 1 MGRGQLILIEGLDRSGKSTQSAILAEKLGKS----KLLKFPDRSTSVGKIINEYLTNSSF 56 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER----------- 109 + + ++F+A R + +I L +G ++ DR++ S AY + Sbjct: 57 QLSDQTAHLLFSANRWELNNEIIE-LLNDGYFVILDRYIYSGIAYSLAKYEYSKTANNSG 115 Query: 110 ------DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 S Q ++ L P + + L R+ + +E Sbjct: 116 VIASTTASEQMGDVEWLYGPDKGLPKP--------DLTLFLTLDLVELGKRKGWGNERYE 167 Query: 164 RKDVMIHEKRRQIFLDIA-RNQPDRCHIVD-SAHSFQSVATNILNIVWELVQKRVSPLSS 221 + + + FL I + + +VD S + + V I +V E K+V+ + Sbjct: 168 LE--EFQKIVKSSFLRILNHEEDETVELVDVSGKNIEEVTALIWEVVEE---KKVNQTTE 222 Query: 222 KK 223 ++ Sbjct: 223 RQ 224 >gi|226488062|emb|CAX75696.1| Thymidylate kinase [Schistosoma japonicum] Length = 224 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 32/232 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58 + GLF+ FEG+E GK T LL+ L + + P TP + G Sbjct: 5 IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117 + A ++ A R + + I AL G ++ DR+ S AY + Sbjct: 63 KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + + PD I L + S+R+S+ + FE + ++ F Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGSNKFE--TMDFQKRVLTYF 172 Query: 178 LDI----------------ARNQPDRCHIVDSA-HSFQSVATNILNIVWELV 212 + A ++P H + + + + + I+ I+ + Sbjct: 173 GRLSREMESELNENNDDDNAESEPRLWHWIPATGQTVDEIHSCIMAIIDSKL 224 >gi|226488066|emb|CAX75698.1| Thymidylate kinase [Schistosoma japonicum] gi|226488068|emb|CAX75699.1| Thymidylate kinase [Schistosoma japonicum] Length = 224 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 32/232 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58 + GLF+ FEG+E GK T LL+ L + + P TP + G Sbjct: 5 IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117 + A ++ A R + + I AL G ++ DR+ S AY + Sbjct: 63 KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + + PD I L + S+R+S+ + FE + ++ F Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGGNKFE--TMDFQKRVLTYF 172 Query: 178 LDI----------------ARNQPDRCHIVDSA-HSFQSVATNILNIVWELV 212 + A ++P H + + + + + I+ I+ + Sbjct: 173 GRLSREMESELNENNDDDNAESEPRLWHWIPATGQTVDEIHSCIMAIIDSKL 224 >gi|255728491|ref|XP_002549171.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404] gi|240133487|gb|EER33043.1| hypothetical protein CTRG_03468 [Candida tropicalis MYA-3404] Length = 222 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 79/223 (35%), Gaps = 30/223 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 M G I EG++ +GK+T S+L + + P TP + L+ Sbjct: 1 MPRGQLILIEGLDRSGKSTQASILASKFTSS----QLIKFPDRSTPIGKLINE-YLTNKS 55 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL---- 115 ++ ++F+A R + + I+ L +G ++ DR++ S AY ++ Sbjct: 56 FSLNDQSAHLLFSANRWE-LNQQIQELLNKGYFVILDRYIYSGIAYTLAKNEINDESISS 114 Query: 116 --------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 +D L P + + L S R+ + +E + Sbjct: 115 GKNSKQLGDVDWLLAPDKGLPKP--------DLTLFLTLDLEEISKRKGWGDERYELQ-- 164 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVW 209 K + FL + + IVD + V+ + +I+ Sbjct: 165 QFQAKVKDCFLQVLDTKDPSICIVDVGEKNIDQVSKQLWDIIE 207 >gi|257453209|ref|ZP_05618508.1| thymidylate kinase [Fusobacterium sp. 3_1_5R] Length = 222 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 29/229 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQSHLLLEHFLSLGRKARRLSFPNYESPACEPVKMYLAGEFGLNA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQH---- 114 ++ + ++A R + + + + + DR++ S+ +Q + + Sbjct: 62 EKVNPYPVSTMYAIDRYASYQKDWGYDYQQEESIFVADRYVTSNMIHQASKLEGKEKEEY 121 Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++L++L+ + PDC I LD+P + ++ R + ++ IHE+ Sbjct: 122 LIWLETLEYKQFEIPRPDCIIFLDMPTKQAQELMKKRANKITGE-------EEKDIHERN 174 Query: 174 RQIFL--------DIARNQP-DRCHIVDSAH--SFQSVATNILNIVWEL 211 R+ +L ++A R VD S Q + IL V E+ Sbjct: 175 RE-YLEKSYRNACEMAEKYGWTRISCVDGDRIKSIQEIRNEILEKVREI 222 >gi|300790592|ref|YP_003770883.1| dTMP kinase [Amycolatopsis mediterranei U32] gi|299800106|gb|ADJ50481.1| dTMP kinase [Amycolatopsis mediterranei U32] Length = 703 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 32/228 (14%) Query: 3 SGLFISFEGIEGAGKTTHISL------LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 +G I+ EG TT I+ L +++ V V +P A + R L Sbjct: 479 NGYLIAVEG------TTAINTAIQAVNLADWMRGGTRPVVVAADP----ALDDQRLAALV 528 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G GA A+A+ AA R D VE ++PAL G +++ +RF+DS A+ Sbjct: 529 SGASLTGARAQALAAAAVRADIVERHVQPALDAGSVVVMERFVDSPLAHLSAVAGLDSDE 588 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+ L + + + PD TI+LD A D + + + + Sbjct: 589 LEGLADWATGRLRPDMTILLDAAP--------------NGAPRDK--SATMNDQWRVQHL 632 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 ++A P+R +VD+ + VA I + + R++ L+ + Sbjct: 633 LTEMAAADPERYVVVDADGTDVEVAERIRTALRAVFVGRLAALAPTTE 680 >gi|167769946|ref|ZP_02441999.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM 17241] gi|167667937|gb|EDS12067.1| hypothetical protein ANACOL_01287 [Anaerotruncus colihominis DSM 17241] Length = 221 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 66/180 (36%), Gaps = 10/180 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---V 59 G I +G++GAGK T +LL R P T + A L+ Sbjct: 2 KGRLIVIDGLDGAGKQTQAALLLDRFARAGVPARGISFPDYTHPSSALVKQYLAGEFGQA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFL 117 D+ A A + +A R + + G ++ DR+ S+ +Q + F+ Sbjct: 62 DDVPAYAASSFYAVDRFASYVGYWKDDYLAGHTIIADRYATSNLIHQMGKLPRGQWDAFI 121 Query: 118 DSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 D + + PD + LD+ D+ + + RY +A D E + + R Sbjct: 122 DWSADFEYEKLGLPKPDAVLFLDMHPDVSERLLMKRYGGD-AAKKDIHEA-NAAYMRRCR 179 >gi|325119339|emb|CBZ54892.1| Thymidylate kinase, related [Neospora caninum Liverpool] Length = 271 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 50/266 (18%), Positives = 89/266 (33%), Gaps = 57/266 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G + FEGI+ +GK+T L L ++ + R P T + L S Sbjct: 7 KRGCLVVFEGIDRSGKSTQARLAYERLLKEGQPTELIRFPDRTTSIGQVLDKFLASATWS 66 Query: 61 EFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQ 113 G + ++FAA R + ++R AL EGK +L DR+ S AY G Sbjct: 67 NEGPCQIPPPQLTHLLFAANRWEAQARILR-ALGEGKTVLVDRYSFSGIAYTVGAAPVLA 125 Query: 114 HLFLDSL---------------------------------QEISVQEVMPDCTIILDLPV 140 SL +E + PD LD+ Sbjct: 126 ETEAKSLQADANASGDPAKAAWSWAASTAATGASVDPAFCRETERGLLAPDAVFFLDISP 185 Query: 141 DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQS 199 R + +E+ + E+ Q++ + P + ++ S Sbjct: 186 RETQSR--------GGYGEEVYEK--LATQERVYQVYRQF-ESLP-YWRRIPAASVSPNE 233 Query: 200 VATNILNIVWELVQ--KRVSPLSSKK 223 + ++ + ++Q + PLS ++ Sbjct: 234 LHETVIENLKAVIQAAQPEQPLSPRE 259 >gi|158314647|ref|YP_001507155.1| thymidylate kinase [Frankia sp. EAN1pec] gi|158110052|gb|ABW12249.1| thymidylate kinase [Frankia sp. EAN1pec] Length = 224 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 87/224 (38%), Gaps = 23/224 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62 + +S EG+ G+GK+T LL+ L+ + V + + + + S D F Sbjct: 1 MLVSLEGLPGSGKSTQARLLEGRLRGEGLRVTYLPDLATLDTGDVGTALVEIFSSSDDPF 60 Query: 63 ----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-------QGERDS 111 E ++ AA R D V I PAL +++ DR + + ++Y Q + Sbjct: 61 LRHGDVVTECLLAAAVRADIVATRIEPALDHHDVVIEDRGVHTMFSYGLASLIRQHAAEV 120 Query: 112 SQHL-FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + +LD L ++ D + L PV + R + R R + +R + Sbjct: 121 DDAVSWLDGLGRLA--GRRADVVLWLSAPVGEMVVRAEARDGRRWTGE----QRAYLSF- 173 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + ++A + + + ++V + +V +++ Sbjct: 174 --VDLAYQELAARDAGMVRVPTAGQAPEAVHAAVWEVVAAQLKR 215 >gi|296206037|ref|XP_002750036.1| PREDICTED: thymidylate kinase-like isoform 2 [Callithrix jacchus] Length = 188 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 39/212 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGMDRAGKSTQSRKLVDALCALGHRAELLRFPERSTEIGKLLSSYLEKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + Sbjct: 63 LEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVMDRYAFSGVAFSGAK------------ 109 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ L R + + +E + E+ Q F + Sbjct: 110 -------------------ELQLADAAKRSAF----GHERYE--NGAFQERALQCFHQLM 144 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R+ +VD++ S ++V +IL + + ++ Sbjct: 145 RDTTVNWKMVDASKSIEAVHEDILVLAEDAIR 176 >gi|172040159|ref|YP_001799873.1| thymidylate kinase [Corynebacterium urealyticum DSM 7109] gi|171851463|emb|CAQ04439.1| unnamed protein product [Corynebacterium urealyticum DSM 7109] Length = 231 Score = 110 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 20/198 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE---AARHVLLSCGVDE 61 + I+FEGI+GAGK T ++ L+ L + V P + A R + G Sbjct: 1 MIIAFEGIDGAGKNTLVTALEAELLARELPVARVSFPRYEDSVHAQLAQRALTGQMGDLI 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-------- 113 A +FA R + V + +G I+L DRF+ S+ AY R + + Sbjct: 61 DSIHGMATLFALDRAE-VAEQLEDLDADGYIVLMDRFVASNAAYSAARLAEEATGGAEPL 119 Query: 114 ----HLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 H ++ ++ + V ++ +PD +++D ++ +R ++R + D +E D Sbjct: 120 EPAQHPVVEWVRSLEVDDLGSPVPDLQVLVDASAEVAGERAKSREQQDAARTRDAYES-D 178 Query: 167 VMIHEKRRQIFLDIARNQ 184 + ++ + + +A + Sbjct: 179 GGLQQRTLEAYHSLASAE 196 >gi|296327936|ref|ZP_06870471.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154892|gb|EFG95674.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 225 Score = 110 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 88/230 (38%), Gaps = 29/230 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNEEKDEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + ERKD+ HE Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGS-----ERKDI--HE-V 173 Query: 174 RQIFLDI------ARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 + +L A ++ ++ S + + I + + E++ Sbjct: 174 NEDYLKRSYENATAISKKYNWCEIECVENNKIKSIEKINDEIFSKIKEII 223 >gi|19704658|ref|NP_604220.1| thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714964|gb|AAL95519.1| Thymidylate kinase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 225 Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 88/230 (38%), Gaps = 29/230 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPVSTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNEKKDEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + ERKD+ HE Sbjct: 122 LKWLVDLEYNKNEIPEPDIVIFLKMPIDKAKELMENRKNKIDGS-----ERKDI--HE-V 173 Query: 174 RQIFLDI------ARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 + +L A ++ ++ S + + I + + E++ Sbjct: 174 NEDYLKRSYENATAISKKYNWCEIECVENNKIKSIEKINDEIFSKIKEII 223 >gi|326925774|ref|XP_003209084.1| PREDICTED: thymidylate kinase-like isoform 2 [Meleagris gallopavo] Length = 188 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 74/212 (34%), Gaps = 39/212 (18%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ AGK+T L + LQ + + R P T LS E Sbjct: 5 RGALIVLEGMDRAGKSTQSRRLVQALQAAGHRADLLRFPERTTEIGRLIGAYLS-REREL 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++F+A R +HV + ++ L +G L+ DR+ S A+ ++ Sbjct: 64 EDHVVHLLFSANRWEHVTS-MKEKLHQGITLVVDRYAFSGVAFTSAKE------------ 110 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 L + R + + +E +K Q F + Sbjct: 111 ---------------LSPEEAAAR--------GNFGRERYENGP--FQKKVLQSFHHLMN 145 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +D++ S + + I + + +Q+ Sbjct: 146 EKTLNWKTMDASKSIEDLHREIKTVAEKTMQE 177 >gi|193631931|ref|XP_001951558.1| PREDICTED: thymidylate kinase-like isoform 3 [Acyrthosiphon pisum] gi|193631933|ref|XP_001951544.1| PREDICTED: thymidylate kinase-like isoform 2 [Acyrthosiphon pisum] gi|193631935|ref|XP_001951524.1| PREDICTED: thymidylate kinase-like isoform 1 [Acyrthosiphon pisum] gi|328724839|ref|XP_003248266.1| PREDICTED: thymidylate kinase-like [Acyrthosiphon pisum] Length = 212 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 67/211 (31%), Gaps = 20/211 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG + +GKTT + L L P TP L E Sbjct: 7 RGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYL--SRKIE 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + +E IR + G L+ DR+ S + + Sbjct: 65 LPDRSVHLLFSANRWE-LEPEIRKQIESGVTLIVDRYSYSGVVFTSAKQCVDF---KWCC 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD + L L + KR + +E ++ K + Sbjct: 121 GPENGLPKPDIVMFLKLSIGEMAKR--------SGFGDERYE--NIEFQNKVDINYDKF- 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + D VD+A + +L V + + Sbjct: 170 --KNDNFIQVDAAQDVSILTNTLLEQVLKTI 198 >gi|254302827|ref|ZP_04970185.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323019|gb|EDK88269.1| dTMP kinase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 225 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 86/231 (37%), Gaps = 29/231 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + + I++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYTDDYIIITDRYVTSNMIHQASKIKNNEEKDEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + IHE Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173 Query: 174 RQIFLD--------IARNQPDR-CHIVDSA--HSFQSVATNILNIVWELVQ 213 + +L I++ R V++ S + + I + + ++++ Sbjct: 174 NEDYLKKSYDNATAISKKYNWREIECVENNKIKSIERINDEIFSKIKKIIE 224 >gi|224059750|ref|XP_002191830.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 215 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 16/171 (9%) Query: 44 TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 T + L ++F+A R +HV +++ L +G ++ DR+ S Sbjct: 50 TEIGQLISSYL--GREKNLEDHTIHLLFSANRWEHVP-MMKEKLHQGITVVVDRYAFSGV 106 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 A+ + + L+ ++ V PD + L L + +R + +E Sbjct: 107 AFTSAKGNFG---LEWCKQPDVGLPKPDLILFLQLNPEAAAER--------GDFGHERYE 155 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 EK Q F + ++ VD++ S + + I +I E +++ Sbjct: 156 --TSSFQEKVLQSFYCLMEDKSLNWKTVDASKSIEDLHREIKSIAKETMEE 204 >gi|187918646|ref|YP_001884212.1| thymidylate kinase [Borrelia hermsii DAH] gi|119861494|gb|AAX17289.1| thymidylate kinase [Borrelia hermsii DAH] Length = 212 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 21/168 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F EGI+G+GKT+ I L + L H T+EP + R L + Sbjct: 18 FYCIEGIDGSGKTSIIQKL-QKLCNNKLKYHFTKEPSQGIIGKFIRKQLTNLKN-PLRRV 75 Query: 66 AEAIVFAAARLDHV---ENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A ++AA R +H+ +N I L +GK ++ DR+L SS YQGE Sbjct: 76 SLAHLYAADRYEHLYNTKNGILEILNKGKTKVITDRYLFSSIVYQGELG----------Y 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 +++ +P+ + I KR+Q D FE ++ Sbjct: 126 KLNRDFPLPEKLFFIKTDPSIAYKRIQ-----ENRIQADLFEFEEAKF 168 >gi|227486952|ref|ZP_03917268.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867] gi|227093026|gb|EEI28338.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51867] Length = 205 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 6/207 (2%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ EGI+GAGK T + L + + + R A A + + G Sbjct: 1 MILAVEGIDGAGKNTLVRDLLKHIDAETLS--FPRYSTSDAAKLARKALYGRMGDMTESP 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQE 122 A A +FA R E + + A + IL+ DR++ S+ AY R D ++ L+ Sbjct: 59 YAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYDLEY 118 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + P I+L+ P + +R ++R D +E+ D + + + +AR Sbjct: 119 GELGLPKPALQILLETPASVAQERAESRARAERDRAKDTYEQ-DSSLQVRTSVAYRRLAR 177 Query: 183 NQ-PDRCHIVDSAHSFQSVATNILNIV 208 Q IV + Q ILN + Sbjct: 178 GQWASPWLIVPHTTTPQEATEEILNRL 204 >gi|256027750|ref|ZP_05441584.1| thymidylate kinase [Fusobacterium sp. D11] gi|289765707|ref|ZP_06525085.1| thymidylate kinase [Fusobacterium sp. D11] gi|289717262|gb|EFD81274.1| thymidylate kinase [Fusobacterium sp. D11] Length = 225 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 84/225 (37%), Gaps = 17/225 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNEEKDEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + + +K Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181 Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + I++ + ++ S + + I + + E++Q Sbjct: 182 YENATAISKKY--NWYEIECVENNKIKSIEKINDEIFSKIKEIIQ 224 >gi|319442834|ref|ZP_07991990.1| thymidylate kinase [Corynebacterium variabile DSM 44702] Length = 236 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 91/217 (41%), Gaps = 16/217 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEF- 62 + I+FEGI+GAGK T ++ L+ L + V P T L G+ + Sbjct: 1 MIIAFEGIDGAGKNTVVTALEAELIAREIPVARLAFPRYETSVHAQLASAALHGGMGDLV 60 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH------- 114 A A +FA R + V + +G ++L DR++ S+ AY R S Sbjct: 61 DSAYGMATLFALDRAE-VAAELTGFDEDGYVVLLDRWVASNAAYSAARLSQDASAGGESS 119 Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++D L+ + +PD +++++P + RV R +D +E D + Sbjct: 120 EVVAWVDDLEFTQLGIPVPDLQVLVNVPDSVTAGRVAARAEEDAGRGVDAYE-VDGGLQA 178 Query: 172 KRRQIFLDIARNQPDR-CHIVDSAHSFQSVATNILNI 207 + + +A + + ++D++ ++ ++ + Sbjct: 179 RTLAAYRALADARWNSPWLVLDNSGDRSALDAQLVEL 215 >gi|237744136|ref|ZP_04574617.1| thymidylate kinase [Fusobacterium sp. 7_1] gi|229431365|gb|EEO41577.1| thymidylate kinase [Fusobacterium sp. 7_1] Length = 225 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 81/225 (36%), Gaps = 17/225 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMVHQASKIKDNEEKDEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + + +K Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181 Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + I++ ++ S + + I + E +Q Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFFKIKERIQ 224 >gi|269860112|ref|XP_002649779.1| thymidylate kinase [Enterocytozoon bieneusi H348] gi|220066838|gb|EED44309.1| thymidylate kinase [Enterocytozoon bieneusi H348] Length = 205 Score = 108 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 30/216 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SC 57 N LFI EGI+ +GKTT +L+ + + V T + + L + Sbjct: 5 NKNLFIVLEGIDRSGKTTLCNLISKKINA----VKFNFPDRTTNTGKKIDNFLKQYCENV 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E + R + +E + I L I +CDR+ S Y + ++ Sbjct: 61 ENIFDNKEINEKLHLLFRDNRLEKIPFILKTLENHDI-ICDRYSMSGIVYSISKGLNE-- 117 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +++ +PD T LD+ +I KR + D E +K + Sbjct: 118 --KWVKDSEKDLPIPDITFFLDVNPEISFKR-----QDFGNEIHDTIE-----FQKKVYE 165 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +L D + + +++ ILN + Sbjct: 166 NYLK----NKDYMIFIK-NDTIENMLNEILNYINRF 196 >gi|256845595|ref|ZP_05551053.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2] gi|256719154|gb|EEU32709.1| thymidylate kinase [Fusobacterium sp. 3_1_36A2] Length = 228 Score = 108 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 83/233 (35%), Gaps = 33/233 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLGGTFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNKEKEEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + IHE Sbjct: 122 LRWLVDLEYNKNEIPKPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173 Query: 174 RQIFLD--------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + +L I++ ++ S + + I + +++Q Sbjct: 174 NEDYLKKSYDNATAISKKY--NWCEIECVENNKIKSIEKINDEIFFKIKDIIQ 224 >gi|120402750|ref|YP_952579.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1] gi|119955568|gb|ABM12573.1| thymidylate kinase [Mycobacterium vanbaalenii PYR-1] Length = 211 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 10/188 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I EG++GAGK T + L+ + V P G + A+ A L D Sbjct: 1 MLIVIEGVDGAGKRTLTNGLRAAFESDGRSVATLAFPRYGVSVPADLAAEALHGAHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116 A A++FA R + I ++L DR++ S+ AY R D + Sbjct: 61 ESVYAMAVLFAMDRAGARDE-IDHLKSAYDVVLLDRYVASNAAYSAARLHQGVDGDVAAW 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ ++ PD ++LD+P ++ +R +R + D +ER D + + + Sbjct: 120 VGDLEYGRLRLPKPDWQVLLDVPTELAAQRAVSRAAREADRARDAYER-DDGLQRRTSAV 178 Query: 177 FLDIARNQ 184 + ++A Sbjct: 179 YAELAAAN 186 >gi|302530026|ref|ZP_07282368.1| thymidylate kinase [Streptomyces sp. AA4] gi|302438921|gb|EFL10737.1| thymidylate kinase [Streptomyces sp. AA4] Length = 210 Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 15/203 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-EFG 63 + EG++GAGK T L L+ V P G + A+ R L D Sbjct: 2 VVIEGLDGAGKRTLSEGLTAALEDAGASVGSLAFPRYGRSVHADLVREALHRGHGDLADS 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--GERDSSQHLFLDSLQ 121 A+++A R + IR L ++L DR++ S+ AY R+ + + + Sbjct: 62 VYGMAMLYALDRSGAADE-IRALLAANDVVLLDRYVASNAAYAAARLREHADGAVVQWVW 120 Query: 122 EISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ V PD ++L + ++ +R R + D FE D + ++ ++ Sbjct: 121 DLEVTRFGLPRPDAHLLLRVSPEVAAERAVRRAESDAARTRDAFES-DDSLQQRCAAVYD 179 Query: 179 DIARN---QPDRCHIVDSAHSFQ 198 ++A P H++D Sbjct: 180 ELAAASWLAP--WHVLDGVAGVD 200 >gi|258654373|ref|YP_003203529.1| thymidylate kinase [Nakamurella multipartita DSM 44233] gi|258557598|gb|ACV80540.1| thymidylate kinase [Nakamurella multipartita DSM 44233] Length = 213 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 71/192 (36%), Gaps = 15/192 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I EG++G+GK T L Q V P A ++ G Sbjct: 2 GRLIVIEGLDGSGKRTLTQALAARWQADGRTVATLAFPRYGLDVHA--DLVQDALYGRLG 59 Query: 64 AEAE-----AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ----- 113 ++ A++FA R IR +LL DR++ S+ AY R Sbjct: 60 DLSDSIYGPAVLFALDRRAAAGQ-IRDLRQAHDVLLLDRYVTSNAAYGSARLGGPDRPTD 118 Query: 114 -HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 ++ +L+ PD I+L V++ +R +NR + LD FE D + + Sbjct: 119 FPAWVRALEIDRFGVPAPDHQILLATSVELAGQRARNRADQDQDRALDRFEA-DDGLQRR 177 Query: 173 RRQIFLDIARNQ 184 ++ +A Sbjct: 178 TAAMYRRLAEQD 189 >gi|227541887|ref|ZP_03971936.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866] gi|227182330|gb|EEI63302.1| thymidylate kinase [Corynebacterium glucuronolyticum ATCC 51866] Length = 205 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 12/210 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLS-CGVDE 61 + ++ EGI+GAGK T L++ L KN D P + + A+ AR L G Sbjct: 1 MILAVEGIDGAGKNT---LVRDLL--KNIDAETLSFPRYSTSDAAKLARKALYGRMGDMT 55 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 A A +FA R E + + A + IL+ DR++ S+ AY R D ++ Sbjct: 56 ESPYAMAALFALDRAGAREYLQKYAASQDSILILDRYVASNAAYTAARLEDMDAAQWVYD 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+ + P I+L+ P + +R ++R D +E+ D + + + Sbjct: 116 LEYGELGLPKPALQILLETPASVAQERAESRARAERDRAKDTYEQ-DSSLQVRTSVAYRR 174 Query: 180 IARNQ-PDRCHIVDSAHSFQSVATNILNIV 208 +AR Q IV + Q ILN + Sbjct: 175 LARGQWASPWLIVPHTTTPQEATEEILNRL 204 >gi|294785116|ref|ZP_06750404.1| dTMP kinase [Fusobacterium sp. 3_1_27] gi|294486830|gb|EFG34192.1| dTMP kinase [Fusobacterium sp. 3_1_27] Length = 225 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 33/225 (14%), Positives = 82/225 (36%), Gaps = 17/225 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYIDDYVIITDRYVTSNMIHQASKIKNNEEKEEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + + +K Sbjct: 122 LRWLVDLEYNKNKIPEPDIVIFLKMPIDKAKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181 Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + I++ ++ S + + I + +++Q Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFFKIKDIIQ 224 >gi|259013537|ref|NP_001158503.1| thymidylate kinase isoform 2 [Homo sapiens] gi|114584337|ref|XP_001161587.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate kinase) isoform 1 [Pan troglodytes] gi|219521040|gb|AAI71902.1| LOC727761 protein [Homo sapiens] Length = 188 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 43/223 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK------------ 109 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ L R + + +E + E+ + F + Sbjct: 110 -------------------ELQLADAAKRGAF----GHERYE--NGAFQERALRCFHQLM 144 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 145 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 187 >gi|326392432|ref|ZP_08213833.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] gi|325991527|gb|EGD50118.1| thymidylate kinase [Thermoanaerobacter ethanolicus JW 200] Length = 92 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 1/92 (1%) Query: 26 RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRP 85 +L ++ Y++ V REPGGT E R +LL + E +++A++R VE I P Sbjct: 1 EYLLKQGYNILVLREPGGTKVGEKVRDILLD-KNNFISPVTETLLYASSRAQLVEEKILP 59 Query: 86 ALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 AL +G+I++ DRF+DSSY YQG L Sbjct: 60 ALEKGQIVILDRFVDSSYVYQGYARGLGIEKL 91 >gi|20178547|ref|NP_619968.1| CPXV186 protein [Cowpox virus] gi|20153165|gb|AAM13626.1|AF482758_177 CPXV186 protein [Cowpox virus] Length = 227 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 24 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 81 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 183 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223 >gi|30519543|emb|CAD90718.1| A51R protein [Cowpox virus] Length = 227 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 24 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 81 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 183 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223 >gi|296168958|ref|ZP_06850627.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896427|gb|EFG76080.1| thymidylate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 229 Score = 107 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 85/202 (42%), Gaps = 11/202 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T L++ + V + P G + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLSEGLRKAFEAAGKSVAIVGFPRYGKSVTADVAAEALHGRHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 A A++FA R VE+ I + +++ DR++ S+ AY R + + Sbjct: 61 ASVYAMAMLFALDRAGAVED-IEALRRDHDVVILDRYVASNAAYSAARLHEGAGGAAAAW 119 Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + E + + PD ++L +P D+ +R ++R D +ER D + + + Sbjct: 120 VLEFEYRRLRLPAPDWQVLLAVPADLAGQRARSRAESDPGRARDSYER-DDELQLRTGAV 178 Query: 177 FLDIARN-QPDRCHIVDSAHSF 197 + ++A + D+ Sbjct: 179 YAELAAAGWGGPWLVADADVDP 200 >gi|145225292|ref|YP_001135970.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK] gi|315445589|ref|YP_004078468.1| thymidylate kinase [Mycobacterium sp. Spyr1] gi|145217778|gb|ABP47182.1| thymidylate kinase [Mycobacterium gilvum PYR-GCK] gi|315263892|gb|ADU00634.1| thymidylate kinase [Mycobacterium sp. Spyr1] Length = 209 Score = 107 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 80/188 (42%), Gaps = 10/188 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD-E 61 + I EG++GAGK T + L+ + V P G + A+ A L D Sbjct: 1 MLIVIEGVDGAGKRTLTNGLRAAFESGGRSVATLAFPRYGVSVPADVAAEALHGQHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS 119 A A++FA R + I +++ DR++ S+ AY R + + Sbjct: 61 DSVYAMAMLFAMDRAGARDE-IGHLTSAYSVVILDRYVASNAAYSAARLHQGADGDVVAW 119 Query: 120 LQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++++ + P ++LD+P ++ +R NR + + D +ER D + + + Sbjct: 120 VRDLEYGRLKLPVPTWQVLLDVPTELAAQRAVNRAAEDAARARDAYER-DDGLQRRTGAV 178 Query: 177 FLDIARNQ 184 + ++A Q Sbjct: 179 YAELAAAQ 186 >gi|262068171|ref|ZP_06027783.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693] gi|291378114|gb|EFE85632.1| dTMP kinase [Fusobacterium periodonticum ATCC 33693] Length = 224 Score = 107 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 81/233 (34%), Gaps = 33/233 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVVEGTDSSGKETQTKLLYERVKKVYDKTIKISFPNYDSPACEPVKMYLAGKFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + ++A R + ++ +++ DR++ S+ +Q + D Sbjct: 62 TKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDTEAKDDY 121 Query: 120 LQEIS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L + + PD I L +P+D + ++NR + + + IHE Sbjct: 122 LNWLVDLEYKKNEIPEPDMVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173 Query: 174 RQIFLD--------IARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + +L I++ ++ + + + I + + EL++ Sbjct: 174 NEDYLKKSYDNATAISKKYS--WCEIECVENNEIKTIEKINDEIFSKIKELLK 224 >gi|196234357|ref|ZP_03133185.1| thymidylate kinase [Chthoniobacter flavus Ellin428] gi|196221549|gb|EDY16091.1| thymidylate kinase [Chthoniobacter flavus Ellin428] Length = 253 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 81/218 (37%), Gaps = 26/218 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G + EG +G+G++T I +L ++L+ Y V +E + Sbjct: 22 AGKLFAIEGADGSGRSTQIGMLSQWLEANGYAVRHMGLRRSNLVSEELEEA---KQGNVL 78 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ +A D + + I PAL G I++ DR++ + A RD + + Sbjct: 79 THTTLSLFYATDFFDQLVHEIVPALRAGLIVIADRYIYTLMA----RDLVRGADRAWTRN 134 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVM-----------IH 170 + ++PD + ++R + ++++ LDY+E D+ Sbjct: 135 LYSPALVPDAVFYFRVGAAQLVER-----NFQKNSTLDYWESGMDLGLSRDMFSSFVKYQ 189 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + F + I++ +++ + + Sbjct: 190 RLLQNEFQKMQEEYG--FEIINGNSRVETIQRELRKKI 225 >gi|256374448|ref|YP_003098108.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827] gi|255918751|gb|ACU34262.1| major facilitator superfamily MFS_1 [Actinosynnema mirum DSM 43827] Length = 710 Score = 107 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 52/210 (24%), Positives = 81/210 (38%), Gaps = 18/210 (8%) Query: 3 SGLFISFEGIEGA-GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I+ EG + + + L L+ ++V + EP +L D Sbjct: 479 RGLLITVEG-DASLDTSVQARELAEVLRSAGHEVLLASEPDLDE--RRVHELL--NTADL 533 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G A A+V AA R D VE +RPAL G I++ DRF DS A+ S L+ L Sbjct: 534 AGVRAHALVAAAVRADVVERRVRPALEAGLIVVVDRFADSPIAHFSASGSVDTSELERLS 593 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQN-------RYSLRESACLDYFERKD-----VMI 169 + + + PD T++LD + A E V Sbjct: 594 DWATGRLRPDLTVLLDRTPTTLPASALGAPPGAVPAGTAPPGAASAGLEGARRTITHVEH 653 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199 H + +++ +A PDR +VD+ + Sbjct: 654 HWQVQRLLTGMAAADPDRYLVVDADGTPDE 683 >gi|159109111|ref|XP_001704822.1| CDC8 [Giardia lamblia ATCC 50803] gi|157432895|gb|EDO77148.1| CDC8 [Giardia lamblia ATCC 50803] Length = 254 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 87/224 (38%), Gaps = 28/224 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GLF+ EG++ AGK T I + L++ V V P T + A L +D Sbjct: 30 TRGLFVVIEGLDRAGKDTMIGQVVALLRQAGESVVVQAFPDRTTKSGAVLDRFLQRELD- 88 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++A R + +E V+ L+ G ++C R+ S AY + +++ Sbjct: 89 LSDWDCHRLYAENRKE-LEEVLCNTLLAGTTVICSRYAYSGVAYTAAKGHDMRRCMEA-- 145 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI- 180 + PD I LD+ + ++R + +E +D K F + Sbjct: 146 --DKGLLRPDLVIFLDVDA--------SAVAVRTGFGKERYETQD--FQVKVYTAFQTLW 193 Query: 181 ---------ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++++ DR ++ + ++ I+ +++++ Sbjct: 194 ELLRNSQNGSQDEEDRTTLL--TIRPEDISEAPKQILQAILERK 235 >gi|320531334|ref|ZP_08032307.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171 str. F0337] gi|320136462|gb|EFW28437.1| thymidylate kinase domain protein [Actinomyces sp. oral taxon 171 str. F0337] Length = 109 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 49/84 (58%), Gaps = 2/84 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GLFISFEG +G GKTT I +L L + D +TREPGGT R +LL G Sbjct: 28 GLFISFEGGDGVGKTTQIRILADLLAAADVDHILTREPGGTELGVEIRRLLLHGGH--VA 85 Query: 64 AEAEAIVFAAARLDHVENVIRPAL 87 AEA+++AA R H+ +RPAL Sbjct: 86 PRAEALLYAADRAHHIATRVRPAL 109 >gi|1836042|gb|AAB46838.1| thymidylate kinase [Mus sp.] Length = 227 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 17/195 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVD 60 G I EG++ AGKTT L L + + R P T + L Sbjct: 4 RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYL--EKKT 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + ++F+A R + V +I+ L +G L+ DR+ S A+ G + ++ LD Sbjct: 62 ELEDHSVHLLFSANRWEQVP-LIKAKLNQGVTLVLDRYAFSGVAFTGAK---ENFSLDWC 117 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ V PD + + L+ + R L+ +E ++ F + Sbjct: 118 KQPDVGLPKPD--------LILFLQLQLLDAAARGEFGLERYE--TGTFQKQVLLCFQQL 167 Query: 181 ARNQPDRCHIVDSAH 195 + +VD++ Sbjct: 168 MEEKNLNWKVVDASK 182 >gi|297669949|ref|XP_002813146.1| PREDICTED: thymidylate kinase-like isoform 2 [Pongo abelii] Length = 188 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 78/223 (34%), Gaps = 43/223 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + V +I+ L +G L+ DR+ S A+ G + Sbjct: 63 VEDHSVHLLFSANRWEQVP-LIKEKLSQGVTLVVDRYAFSGVAFTGAK------------ 109 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ L R + + +E + E+ F + Sbjct: 110 -------------------ELQLADAAKRGAF----GHERYENR--AFQERALWCFHQLM 144 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 R+ +VD++ S ++V +I +++ +K + L Sbjct: 145 RDTTLNWKMVDASKSIEAVHEDIRMLSEDVICTATEKPLGELW 187 >gi|66275971|ref|YP_233056.1| thymidylate kinase [Vaccinia virus] gi|29692280|gb|AAO89453.1| thymidylate kinase [Vaccinia virus WR] gi|37551619|gb|AAQ93271.1| thymidylate kinase [Vaccinia virus] gi|88854248|gb|ABD52666.1| thymidylate kinase TMK [Vaccinia virus] gi|90819834|gb|ABD98644.1| VACV-DUKE-182 [Vaccinia virus] Length = 227 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 24 MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 81 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 183 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223 >gi|90660407|gb|ABD97521.1| thymidylate kinase [Cowpox virus] Length = 227 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 24 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 81 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 183 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223 >gi|86739022|ref|YP_479422.1| thymidylate kinase [Frankia sp. CcI3] gi|86565884|gb|ABD09693.1| thymidylate kinase [Frankia sp. CcI3] Length = 212 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 44/201 (21%), Positives = 78/201 (38%), Gaps = 17/201 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVLLSC---GV 59 + ++ EG++GAGK T L L V P P A R +L Sbjct: 1 MILAIEGVDGAGKNTLTGRLVARLTAAGRSVATLAYPRYATEPLGPAVRGLLAGDPRLAP 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114 A A++FA R + + + +++ DR++ S+ AY R S Sbjct: 61 LAASPRASAMMFALDRANSRPEL-DALVRTHDLMIIDRYVASNAAYGAARLPATERESFP 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ L+ ++ +PD ++L +PV R LD FE D + E+ Sbjct: 120 AWIAELELGALALPVPDLQVLLRIPVGTARAGTLARAGADRGRALDTFES-DDGLQERCA 178 Query: 175 QIFLDIARN---QPDRCHIVD 192 +++ ++A P +VD Sbjct: 179 RMYEELAARSWVSP--WLVVD 197 >gi|160858058|emb|CAM58346.1| thymidylate kinase [Vaccinia virus Ankara] Length = 204 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|302531808|ref|ZP_07284150.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4] gi|302440703|gb|EFL12519.1| hypothetical protein SSMG_08190 [Streptomyces sp. AA4] Length = 571 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 20/222 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE---PGGTPAAEAARHVLLSCGVDE 61 + I+FEG+ GAGK+T +L R L+ + V + P A A +L + G Sbjct: 1 MLITFEGLPGAGKSTQSRMLARCLESNGHHATVLPDLATLDTDPVAAALVDLLRTSGDPF 60 Query: 62 F---GAEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGER-----DS 111 A + ++ AA R D V V+ PAL E I++ DR + + +Y + Sbjct: 61 LRSGDAITDTMITAAIRADLVATVLDPALAENPSAIVIEDRGIHTMASYAIAALLRQHRA 120 Query: 112 SQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + LD L I ++ + L +P + +R R A F + Sbjct: 121 PAQVALDWLSSITALAGPRTTRALWLRMPPAVAARRAGERGGDHRPA----FTGEQRAHL 176 Query: 171 EKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211 + +A P ++D + + + + +L Sbjct: 177 AWVDHAYALLAERDPQ-LTVLDAADLDPVGIHLAVHAALGQL 217 >gi|18640403|ref|NP_570559.1| CMLV169 [Camelpox virus] gi|18483079|gb|AAL73876.1|AF438165_166 thymidylate kinase [Camelpox virus M-96] Length = 227 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 24 MSRGALIVFEGLDKSGKTTQCMNIMESILAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 81 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + +DV +K Q + + Sbjct: 136 KSYEFGLPKPDLVIFL----ESGSKEINKNVGEEIY--------EDVAFQQKVLQEYKKM 183 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 223 >gi|56404583|sp|Q80DS7|KTHY_CWPXG RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 204 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|56404622|sp|Q8QMQ7|KTHY_CWPXB RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 204 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|237740226|ref|ZP_04570707.1| thymidylate kinase [Fusobacterium sp. 2_1_31] gi|229422243|gb|EEO37290.1| thymidylate kinase [Fusobacterium sp. 2_1_31] Length = 224 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 82/237 (34%), Gaps = 41/237 (17%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGKFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + ++A R + ++ +++ DR++ S+ +Q + + Sbjct: 62 TKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDAEAKDEY 121 Query: 120 LQEIS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L + + PD I L +P+D + ++NR + + + IHE Sbjct: 122 LNWLVDLEYKKNEIPEPDIVIFLKMPIDKAKELMENRKNKIDG-------SEKKDIHE-V 173 Query: 174 RQIFLD--------IARN---------QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +L I++ + ++ + + + I + + EL++ Sbjct: 174 NEDYLKKSYDNATAISKKYSWCEIECVEDNKIKTI------ERINDEIFSKIEELIK 224 >gi|227550018|ref|ZP_03980067.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291] gi|227077927|gb|EEI15890.1| thymidylate kinase [Corynebacterium lipophiloflavum DSM 44291] Length = 201 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 8/190 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-G 63 + I+ EGI+GAGK T ++ +K L + V R + A+ AR L D Sbjct: 1 MIIAVEGIDGAGKNTLVNAIKGELGAE--TVAFPRY-ADSIYAQLAREALHGRMGDLVDS 57 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSLQ 121 A A +FA R + A KI++ DR++ S+ AY R ++ L+ Sbjct: 58 AHGMATLFALDRAGAKPLLDTFATAPDKIIILDRYVASNAAYTAARTGDDAAARWVFELE 117 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD +++D +R + R D +E D + + ++ +A Sbjct: 118 FVRLGLPRPDLQVLVDTDPAEAGQRARRREEGDAERVRDRYES-DASLQQDTFAAYVRLA 176 Query: 182 RN-QPDRCHI 190 R + Sbjct: 177 ETGWAGRWVV 186 >gi|22164753|ref|NP_671666.1| EVM147 [Ectromelia virus] gi|22123894|gb|AAM92452.1|AF523264_148 EVM147 [Ectromelia virus] Length = 227 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 79/221 (35%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 24 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + + L Sbjct: 81 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAPMTLS---- 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 136 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 183 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 184 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAMHTVTGPVG 223 >gi|56404626|sp|Q8QQ21|KTHY_CAMPS RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56404634|sp|Q8V2K9|KTHY_CAMPM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|19718140|gb|AAG37665.1| CMP166R [Camelpox virus CMS] Length = 204 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESILAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + +DV +K Q + + Sbjct: 113 KSYEFGLPKPDLVIFL----ESGSKEINKNVGEEIY--------EDVAFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|288917903|ref|ZP_06412263.1| thymidylate kinase [Frankia sp. EUN1f] gi|288350692|gb|EFC84909.1| thymidylate kinase [Frankia sp. EUN1f] Length = 214 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 80/215 (37%), Gaps = 16/215 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGV 59 M I+ G++G+GKTT L +L + GG P +A R + + G Sbjct: 1 MRRRPIIALLGVDGSGKTTQARRLAVWLNGQGVPARYFENAGGRPIWDALARRLDRADGQ 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 FG A V A+ R V + + + G++ + DR+ YA R Sbjct: 61 ALFGRRAYVAVEASMRWVAVSRALALSWLTGRVAVMDRYAYCQYAIMRARGDRGE---RR 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ + PD L +P + +RV+ R +R+++ + + Sbjct: 118 VRGAFRRFPAPDLVCYLSVPAGLAQRRVEQRGR----------DREELGYLVAFDEAYRS 167 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +V + S + V T + V ++ + Sbjct: 168 LPEASS--FVVVSAEGSSEDVQTALRATVLPVLAR 200 >gi|25027324|ref|NP_737378.1| thymidylate kinase [Corynebacterium efficiens YS-314] gi|259506538|ref|ZP_05749440.1| thymidylate kinase [Corynebacterium efficiens YS-314] gi|23492605|dbj|BAC17578.1| putative thymidylate kinase [Corynebacterium efficiens YS-314] gi|259165958|gb|EEW50512.1| thymidylate kinase [Corynebacterium efficiens YS-314] Length = 203 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 10/181 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T + L + + R A AA + G A Sbjct: 1 MIISIEGIDGAGKNTLVRALTERIDARVIS--FPRYDTSIHAQLAAEALHGRMGDLTDSA 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--QGERDSSQHLFLDSLQE 122 A A +FA R D ++ + P L LL DR++ S+ AY RD + ++ L+ Sbjct: 59 HAMATLFALDRHDALDELTAPGL-----LLLDRYVASNAAYTAARLRDDAAATWVAELEF 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + P ++LD P D+ +R + R + + D +E D + E+ + +A Sbjct: 114 GRLGLPRPALQVLLDTPTDLAQERARRREASDGARTRDRYE-TDSGLQERTAAQYRRLAA 172 Query: 183 N 183 Sbjct: 173 Q 173 >gi|17975072|ref|NP_536586.1| A49R [Monkeypox virus Zaire-96-I-16] gi|17529939|gb|AAL40617.1|AF380138_159 A49R [Monkeypox virus Zaire-96-I-16] gi|68449041|gb|AAY97163.1| thymidylate kinase [Monkeypox virus] gi|68449243|gb|AAY97364.1| thymidylate kinase [Monkeypox virus] gi|323098573|gb|ADX22811.1| thymidylate kinase [Monkeypox virus] Length = 204 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|62288454|gb|AAX78482.1| unknown [synthetic construct] Length = 253 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 50 MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 106 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 107 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 161 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 162 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 209 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 210 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 249 >gi|56404550|sp|Q76RA8|KTHY_VACCA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56404558|sp|Q77TG7|KTHY_VACCT RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56405064|sp|P68693|KTHY_VACCC RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|56405065|sp|Q80HT9|KTHY_VACCV RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|209870290|pdb|2V54|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase Bound To Tdp gi|209870291|pdb|2V54|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase Bound To Tdp gi|209870294|pdb|2W0S|A Chain A, Crystal Structure Of Vaccinia Virus Thymidylate Kinase Bound To Brivudin-5'-Monophosphate gi|209870295|pdb|2W0S|B Chain B, Crystal Structure Of Vaccinia Virus Thymidylate Kinase Bound To Brivudin-5'-Monophosphate gi|62232|emb|CAA34345.1| unnamed protein product [Vaccinia virus] gi|222737|dbj|BAA01822.1| 23.2K protein [Vaccinia virus] gi|335528|gb|AAA48180.1| putative A48R [Vaccinia virus Copenhagen] gi|2772800|gb|AAB96539.1| thymidylate kinase [Vaccinia virus] gi|6969848|gb|AAF34060.1| TA59R [Vaccinia virus Tian Tan] gi|38349040|gb|AAR18016.1| thymidylate kinase [Vaccinia virus] gi|47088489|gb|AAT10559.1| thymidylate kinase [Vaccinia virus] gi|111184359|gb|ABH08279.1| HSPV170 [Horsepox virus] Length = 204 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|56404530|sp|Q6RZD4|KTHY_RABPU RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|44971520|gb|AAS49870.1| RPXV157 [Rabbitpox virus] gi|167412703|gb|ABZ80137.1| thymidylate kinase [Vaccinia virus GLV-1h68] Length = 204 Score = 105 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|294782678|ref|ZP_06748004.1| dTMP kinase [Fusobacterium sp. 1_1_41FAA] gi|294481319|gb|EFG29094.1| dTMP kinase [Fusobacterium sp. 1_1_41FAA] Length = 224 Score = 105 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 86/237 (36%), Gaps = 41/237 (17%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGKFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS---QHLF 116 + + ++A R + ++ +++ DR++ S+ +Q + + + Sbjct: 62 TKVNPYPVSTMYAIDRYASFKQDWEKYYLDDYLIITDRYVTSNMIHQASKIKDIEAKDEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L+ L ++ ++ PD I L +P + + ++NR + + + IHE Sbjct: 122 LNWLVDLEYKKNEIPEPDIVIFLKMPTNKAKELMENRKNKIDG-------SEKKDIHE-V 173 Query: 174 RQIFLD--------IARN---------QPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + +L I++ + ++ + + + I + + EL++ Sbjct: 174 NEDYLKKSYDNATAISKKYSWCEIECVENNKIKTI------ERINDEIFSKIEELIK 224 >gi|268323396|emb|CBH36984.1| thymidylate kinase [uncultured archaeon] Length = 204 Score = 105 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 94/212 (44%), Gaps = 12/212 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGI+G+GK T LLK+ L +K + V P L ++ + Sbjct: 1 MLINFEGIDGSGKRTQSKLLKKELLKKGFKVADFSYPDYDSEYGKLIKGFLEAKLN-LSS 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + +++ + + E VI+ L +G +++ DR+ S+ AYQ + + ++ ++ Sbjct: 60 DEQFLLYLIDIVKNKEEVIQ-KLRKGHVVIMDRYFLSTIAYQSAN-NFDYEVAKAVTKL- 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +Q +P +++P+DI +R + +D FE + K ++ + + Q Sbjct: 117 IQLPLPSVIFYIEIPLDIASRRKSKQ-----KGIVDRFEG-NTEFLTKVVNVYERLIQEQ 170 Query: 185 --PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +D + IL + EL+++ Sbjct: 171 FPSSSWIKLDGTEDPGLLNKKILLKLEELIKR 202 >gi|260494279|ref|ZP_05814410.1| thymidylate kinase [Fusobacterium sp. 3_1_33] gi|260198425|gb|EEW95941.1| thymidylate kinase [Fusobacterium sp. 3_1_33] Length = 223 Score = 105 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 81/224 (36%), Gaps = 17/224 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC----GV 59 G I EG + +GK T LL +++ P A + L+ Sbjct: 2 GKIIVIEGTDSSGKETQTKLLYERVKKIYDKTIKISFPNYDSPACEPVKMYLAGAFGTDA 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLF 116 + + ++A R + + +++ DR++ S+ +Q + + + + Sbjct: 62 TKVNPYPISTMYAIDRYASFKQDWEKKYIGDYVIITDRYVTSNMVHQASKIKDNEEKDEY 121 Query: 117 LDSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L L ++ + PD I L +P+D + ++NR + + + + +K Sbjct: 122 LKWLVDLEYNKNKIPEPDIVIFLKMPIDKTKELMENRKNKIDGSEKKDIHEVNEDYLKKS 181 Query: 174 RQIFLDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELV 212 + I++ ++ S + + I + + +L+ Sbjct: 182 YENATAISKKY--NWCEIECVENNKIKSIEKINDEIFSKIKDLI 223 >gi|51342318|gb|AAU01362.1| MPXV-WRAIR152 [Monkeypox virus] gi|58220622|gb|AAW67910.1| MPXV-SL-152 [Monkeypox virus] gi|59858958|gb|AAX09253.1| MPXV-COP-152 [Monkeypox virus] gi|68448840|gb|AAY96963.1| thymidylate kinase [Monkeypox virus] gi|68449442|gb|AAY97562.1| thymidylate kinase [Monkeypox virus] gi|68449642|gb|AAY97761.1| thymidylate kinase [Monkeypox virus] Length = 204 Score = 105 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNIGEEIY-------EDVEFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|56404611|sp|Q8JL72|KTHY_ECTVM RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 204 Score = 105 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 47/221 (21%), Positives = 79/221 (35%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + + L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGAPMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAMHTVTGPVG 200 >gi|254822994|ref|ZP_05227995.1| thymidylate kinase [Mycobacterium intracellulare ATCC 13950] Length = 210 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 10/181 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T L + V P G + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLTEGLLSAFEAAGRSVATLAFPRYGQSVTADIAAEALHGEHGDLA 60 Query: 63 GA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116 + A A +FA R VE + + +++ DR++ S+ AY R + Sbjct: 61 SSVYAMATLFALDRAAAVEQL-EGLRRDHDVVIMDRYVASNAAYTAARLHQDAGGPAVAW 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L+ + PD ++L +P ++ +R ++R + D +ER D + ++ + Sbjct: 120 VHGLEYQRLGLPAPDWQVLLAVPAELAGQRARSRAASDPGRARDSYER-DDELQQRTGDV 178 Query: 177 F 177 + Sbjct: 179 Y 179 >gi|115433106|ref|XP_001216690.1| thymidylate kinase [Aspergillus terreus NIH2624] gi|114189542|gb|EAU31242.1| thymidylate kinase [Aspergillus terreus NIH2624] Length = 175 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 15/166 (9%) Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + ++F+A R + V I + G ++ DR+ S Y + + L Sbjct: 14 GSQSQMDDHSIHLLFSANRWE-VAQSIERDVDNGTTVIVDRYSYSGAVYSAAK-GNPSLS 71 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L + V PD + L + + KR + +E + + + R++ Sbjct: 72 LGWAWQPEVGLPRPDLCLFLQITPEEAAKR--------GGFGAERYENETM--QTRVREL 121 Query: 177 FLDIARNQP-DRCHIVDSAHSFQSVATNILNIVWELVQ--KRVSPL 219 F I QP ++D+ SFQ VA ++ V + + R+ PL Sbjct: 122 FKTIFDLQPRGDVTVIDAGRSFQDVAQDMRKAVEDRIACLGRIGPL 167 >gi|253744823|gb|EET00963.1| CDC8 [Giardia intestinalis ATCC 50581] Length = 264 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 16/180 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I EG++ AGK T I L L++ V V P T + L +D Sbjct: 41 RGLLIVVEGLDRAGKDTLIEHLMNLLEQAGESVMVQAFPDRTTKSGIILDRFLRREID-L 99 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++A R + +E + AL+ G ++C R+ S AY + + + Sbjct: 100 SDWDCHELYAENRRE-LEETLCKALLSGTTVICSRYAYSGVAYTAAKGHD----IRKCMK 154 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + PD + LD+ ++R S + +E K F + Sbjct: 155 ADMGLLRPDLIVFLDVDART--------VAMRNSFGKERYE--THDFQVKVYTAFQTLWE 204 >gi|16768438|gb|AAL28438.1| GM04626p [Drosophila melanogaster] Length = 171 Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 17/171 (9%) Query: 44 TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + + L + + E ++F+A R +H+ N ++ L+EG L+ DR+ S Sbjct: 8 SSIGQVINSYLTNSK--DLPDEVIHLMFSANRWEHI-NQVKEKLLEGTTLVVDRYSFSGV 64 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 AY + L D + PD L P N + R + +E Sbjct: 65 AYSAAKG----LDFDWCYAPERGLIKPDAVFYLRAPP--------NDLTHRGQYGKERYE 112 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + V + ++F I + H D+ S + + I +I EL+ K Sbjct: 113 K--VEFQGRVAEVFNRICSKEGSYFHQFDARQSVEDLHAQIASITEELLPK 161 >gi|56713570|gb|AAW23610.1| thymidylate kinase [Vaccinia virus] gi|56713854|gb|AAW23892.1| thymidylate kinase [Vaccinia virus] Length = 204 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESILSN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|322695315|gb|EFY87125.1| thymidylate kinase [Metarhizium acridum CQMa 102] Length = 206 Score = 104 bits (261), Expect = 7e-21, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 71/236 (30%), Gaps = 87/236 (36%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI EG++ +GKTT + LL++ Sbjct: 21 KRGAFIVLEGLDRSGKTTQVKLLEQR---------------------------------- 46 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + I+ + G I++ DRF S Y + + L L + Sbjct: 47 -------------------DQIKSLVAAGTIVISDRFYHSGIVYSAAK-LNPSLPLSWAR 86 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 PD + LDL + R + +E+ + + R++F ++ Sbjct: 87 APERGLPRPDLVLFLDLDEETARAR--------GGWGGELYEK--AEMQRRVRELFWGLS 136 Query: 182 -----------------------RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 R + + +VD+A S + VA I V V + Sbjct: 137 MGGKDIQGQEMLAELGGLDGAQWRQEEEDLVVVDAAGSVEEVADRIWATVEGRVAQ 192 >gi|323098770|gb|ADX23007.1| thymidylate kinase [Monkeypox virus] Length = 204 Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 80/221 (36%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPXPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVEFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|94489660|gb|ABF28748.1| thymidylate kinase [Variola virus] Length = 205 Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160 Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 + I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGEDIHWQII-SSKFEEDVKKELIKNIVIEAIHTVTGPVG 201 >gi|134102882|ref|YP_001108543.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] gi|133915505|emb|CAM05618.1| thymidylate kinase [Saccharopolyspora erythraea NRRL 2338] Length = 209 Score = 104 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 13/192 (6%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVD-EFGAE 65 EG++GAGK T L L R+ V P AE L D Sbjct: 2 IEGLDGAGKRTLADGLTAELSRRGRSVARVAFPRYDADVHAELVAEALRGGHGDLGDSVH 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEI 123 A+++A R + +R L ++L DR++ S+ AY R F+ +E+ Sbjct: 62 GMAVLYALDRRG-AADALRVDLETHDVVLLDRYVASNAAYGAARLHQDAQGDFVAWTEEL 120 Query: 124 SVQEV---MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ PD ++L +P ++ R +R D FE D + E+ +++ + Sbjct: 121 EIKRFALPRPDLQLLLQVPTEVAAGRAAHRERTEAERQRDNFES-DASLQERCGEVYAQL 179 Query: 181 ARNQ---PDRCH 189 A P R Sbjct: 180 AERNWWSPWRVV 191 >gi|291299854|ref|YP_003511132.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728] gi|290569074|gb|ADD42039.1| thymidylate kinase [Stackebrandtia nassauensis DSM 44728] Length = 204 Score = 104 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 78/215 (36%), Gaps = 29/215 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ GI+GAGKTT LKR+L + + V + R VL + ++ Sbjct: 10 IALVGIDGAGKTTQARWLKRWLTQLGHPVRY-------RMVASGRRVLGNTARRLGRPDS 62 Query: 67 EAIV--FAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A++ A R + + + G IL+ DR+ YA + + Sbjct: 63 VALLGPGMAIRAETLLRYWNLTVGNGGGILIADRYAVCQYAR---TRVVYPRLEPWARRL 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + PD T+ LD+ + RV+ R + + V + + Sbjct: 120 LGRVPPPDLTLYLDVAPETAHLRVKTRG----------IDEEPVDSLAAMDSAYRSL--- 166 Query: 184 QPD--RCHIVDSAHSFQSVATNILNIVWELVQKRV 216 P+ IVD+ + +A I + V + + + Sbjct: 167 -PEFASFAIVDANRDPEEIAETIRDEVRTALPRLL 200 >gi|312200592|ref|YP_004020653.1| thymidylate kinase [Frankia sp. EuI1c] gi|311231928|gb|ADP84783.1| thymidylate kinase [Frankia sp. EuI1c] Length = 223 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 13/198 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVLLSC---GV 59 + ++ EGI+GAGK T L L V P P A R +L Sbjct: 1 MIVAIEGIDGAGKNTLTQALVAALTATGRPVSRLAFPRYDVEPLGPAVRAMLTGDQALAP 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQH 114 A A++FA R + + A + ++L DR++ S+ AY R Sbjct: 61 VAASVRASALLFALDRANAGPELAAAAAGD-AVVLVDRYVASNAAYGAARLSAPERPGFR 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ S++ + PD I+L +PV++ R + R +L S D +E D + + Sbjct: 120 DWVASIELTDLALPRPDLQILLRVPVEVARARARARAALDASRAPDRYEA-DDALQARVA 178 Query: 175 QIFLDIARN-QPDRCHIV 191 + ++AR+ R V Sbjct: 179 TEYDELARSGWIGRWLTV 196 >gi|308160228|gb|EFO62726.1| CDC8 [Giardia lamblia P15] Length = 263 Score = 103 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 79/228 (34%), Gaps = 34/228 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + GLFI EG++ AGK T I L L++ V V P T + L +D Sbjct: 38 ITRGLFIVIEGLDRAGKDTMIDQLVALLKQTGESVMVQAFPDRTTKSGIILDRFLRRELD 97 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++A R + +E + L+ G ++C R+ S AY + + Sbjct: 98 -LSDWDCHKLYAENRKE-LEEGLCNTLLTGTTVICSRYAYSGVAYTAAKGHD----IRRC 151 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + PD + LD+ +LR + +E ++ K F + Sbjct: 152 MEADKGLLRPDLVVFLDVDAKT--------VALRTDFGKERYETQN--FQIKVYAAFQTL 201 Query: 181 AR--NQPDRCHIVDSAHS-----------FQSVATNILNIVWELVQKR 215 D + ++++ I+ +++++ Sbjct: 202 WGLLRNSQ-----DGSQDGKDCTTLLTFRPENISEAPRQILQAVLERK 244 >gi|270011758|gb|EFA08206.1| hypothetical protein TcasGA2_TC005833 [Tribolium castaneum] Length = 242 Score = 103 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 82/223 (36%), Gaps = 35/223 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G I EG++ +GK+T L L+ +N + + P T + L Sbjct: 33 LKRGALIVVEGVDRSGKSTQCRKLVESLKARNVNAALVTFPDRTTSTGGLIDKYLKQET- 91 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA ++F A R + + L +G L+ DR+ S Y + +++ + Sbjct: 92 HLCDEAIHLMFTANRWEKKAE-MERLLKQGVTLVVDRYSYSGIVYSSVK---KNMSVKWC 147 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRV---------QNRYSLRESACLDYFERKDVMIHE 171 QE + GL + + R + + +E + + E Sbjct: 148 QE-----------------PENGLLKPDLVLLLVLSEAEMVKRPNYGSEIYENR--EMQE 188 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 K Q F D++ ++ +V + + V +L+ V + V + Sbjct: 189 KVAQAFRDLSER--EKWEVVSADGGVEDVHKELLDKVIKKVSQ 229 >gi|88900791|gb|ABD57703.1| VACV203 [Vaccinia virus] Length = 204 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 79/221 (35%), Gaps = 22/221 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MFRGALIVFEGLDKSGKTTQCMNIMESIPAN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYAAAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVTFQQKVLQEYKKM 160 Query: 181 ARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 200 >gi|169630674|ref|YP_001704323.1| thymidylate kinase [Mycobacterium abscessus ATCC 19977] gi|169242641|emb|CAM63669.1| Probable thymidylate kinase Tmk [Mycobacterium abscessus] Length = 212 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 10/189 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61 G I+ EG++GAGK T L + V P G + A+ A L D Sbjct: 2 GQLIAIEGVDGAGKRTLTEKLIARGNSQGLSVATLDFPRYGRSVHADLAAESLKGGHGDV 61 Query: 62 FG-AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHL 115 A A ++FA R D + + +++ DR++ S+ AY R Sbjct: 62 VSSAYAMGLLFALDRRDARDEL-AGLTRSHDLVILDRWVASNAAYGAARLHQDGGGDMAR 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ L+ PD + LD+ ++ +R + R D +ER D + ++ Sbjct: 121 WVHQLEYERFGLPHPDWQVFLDVSPELAQQRARQREQQESDRARDTYER-DSDLQQRVSA 179 Query: 176 IFLDIARNQ 184 + D+A+ Sbjct: 180 AYADLAQRD 188 >gi|237751787|ref|ZP_04582267.1| thymidylate kinase [Helicobacter bilis ATCC 43879] gi|229373153|gb|EEO23544.1| thymidylate kinase [Helicobacter bilis ATCC 43879] Length = 214 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 81/223 (36%), Gaps = 39/223 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTREPGGTPAAEAARHVLL 55 + EGI+ +GKTT +L+K+ + + V EPG T R +LL Sbjct: 2 KYYVIEGIDTSGKTTQCNLIKQNYPCVSLENYKDSIKDSIIVLNEPGSTYLGNLVRKILL 61 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + ++ ++F A R + + + ++ DR L S AY D + L Sbjct: 62 DSQT-QINEKSSFLLFLAQRAELF--LQLKNISN--TIIADRSLISGVAYARAIDMREAL 116 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +L + ++P + L+ D R+ + LD E+K + + Sbjct: 117 ---NLNLFATGGILPQKIVFLETSKDTLKSRLNAK-------SLDNIEQKGIQYLLDTQS 166 Query: 176 IFLDIAR--------------NQPDRCHIVDSAHSFQSVATNI 204 F +I +PD +DSA + + I Sbjct: 167 YFKEILAYLQDENFIESNPNIKKPD-ILTLDSAMPKEDIHKRI 208 >gi|9627681|ref|NP_042204.1| hypothetical protein VARVgp160 [Variola virus] gi|462468|sp|P33803|KTHY_VAR67 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|439072|gb|AAA60903.1| homolog of vaccinia virus CDS A48R (thymidylate kinase); putative [Variola major virus] gi|457051|emb|CAA49101.1| J2R [Variola virus] gi|516401|emb|CAA47543.1| thymidylate kinase [Variola virus] gi|5830722|emb|CAB54761.1| K2R protein [Variola minor virus] gi|94483807|gb|ABF22924.1| thymidylate kinase [Variola virus] gi|94484011|gb|ABF23127.1| thymidylate kinase [Variola virus] gi|94484214|gb|ABF23329.1| thymidylate kinase [Variola virus] gi|94484421|gb|ABF23535.1| thymidylate kinase [Variola virus] gi|94484623|gb|ABF23736.1| thymidylate kinase [Variola virus] gi|94484821|gb|ABF23933.1| thymidylate kinase [Variola virus] gi|94485019|gb|ABF24130.1| thymidylate kinase [Variola virus] gi|94485217|gb|ABF24327.1| thymidylate kinase [Variola virus] gi|94485419|gb|ABF24528.1| thymidylate kinase [Variola virus] gi|94485622|gb|ABF24730.1| thymidylate kinase [Variola virus] gi|94485824|gb|ABF24931.1| thymidylate kinase [Variola virus] gi|94486028|gb|ABF25134.1| thymidylate kinase [Variola virus] gi|94486229|gb|ABF25334.1| thymidylate kinase [Variola virus] gi|94486432|gb|ABF25536.1| thymidylate kinase [Variola virus] gi|94486635|gb|ABF25738.1| thymidylate kinase [Variola virus] gi|94486837|gb|ABF25939.1| thymidylate kinase [Variola virus] gi|94487040|gb|ABF26141.1| thymidylate kinase [Variola virus] gi|94487242|gb|ABF26342.1| thymidylate kinase [Variola virus] gi|94487445|gb|ABF26544.1| thymidylate kinase [Variola virus] gi|94487648|gb|ABF26746.1| thymidylate kinase [Variola virus] gi|94487849|gb|ABF26946.1| thymidylate kinase [Variola virus] gi|94488053|gb|ABF27149.1| thymidylate kinase [Variola virus] gi|94488656|gb|ABF27749.1| thymidylate kinase [Variola virus] gi|94488857|gb|ABF27949.1| thymidylate kinase [Variola virus] gi|94489057|gb|ABF28148.1| thymidylate kinase [Variola virus] gi|94489257|gb|ABF28347.1| thymidylate kinase [Variola virus] gi|94489458|gb|ABF28547.1| thymidylate kinase [Variola virus] gi|94489859|gb|ABF28946.1| thymidylate kinase [Variola virus] gi|94490268|gb|ABF29353.1| thymidylate kinase [Variola virus] gi|109724203|gb|ABG43329.1| thymidylate kinase [Variola virus] gi|109724407|gb|ABG43532.1| thymidylate kinase [Variola virus] gi|109724610|gb|ABG43734.1| thymidylate kinase [Variola virus] gi|109724814|gb|ABG43937.1| thymidylate kinase [Variola virus] gi|109725017|gb|ABG44139.1| thymidylate kinase [Variola virus] gi|109725222|gb|ABG44343.1| thymidylate kinase [Variola virus] gi|109725427|gb|ABG44547.1| thymidylate kinase [Variola virus] gi|109725629|gb|ABG44748.1| thymidylate kinase [Variola virus] gi|109725833|gb|ABG44951.1| thymidylate kinase [Variola virus] gi|109726036|gb|ABG45153.1| thymidylate kinase [Variola virus] gi|109726442|gb|ABG45557.1| thymidylate kinase [Variola virus] gi|109726646|gb|ABG45760.1| thymidylate kinase [Variola virus] gi|745282|prf||2015436GF J2R gene Length = 205 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160 Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 + I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGEDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 201 >gi|167516318|ref|XP_001742500.1| hypothetical protein [Monosiga brevicollis MX1] gi|163779124|gb|EDQ92738.1| predicted protein [Monosiga brevicollis MX1] Length = 171 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 71/176 (40%), Gaps = 17/176 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGV 59 MN GL I EG + GK+T L +L+ + R P T + + L + Sbjct: 1 MNRGLLIVLEGCDRCGKSTQCGRLVEWLKNHRPNGAESMRFPDRTTQIGSLINQYLRKEI 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +A ++F+A R + + I L G L+ DR+ S A+ + L ++ Sbjct: 61 E-LPDKAAHLLFSANRWELRDE-IERKLANGVSLVVDRYAFSGVAFTSAKG----LDVEW 114 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ +PD +++ + ++ ++R E + +E K ++ Sbjct: 115 CKQPDAGLPVPD--VLIHM--ELSQSEAESRGGFGE----ERYE--VSEFQAKVKE 160 >gi|256070556|ref|XP_002571609.1| thymidylate kinase [Schistosoma mansoni] gi|238656754|emb|CAZ27839.1| thymidylate kinase [Schistosoma mansoni] Length = 222 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 80/229 (34%), Gaps = 30/229 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCGV 59 GLF+ FEG+E GK T LL+ L + + P TP + S G Sbjct: 6 KRGLFVVFEGVEKCGKKTQSELLQEALTQITGKQALLIHFPDKSTPIGKLLTEY--SDGK 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLD 118 + A +++ A R + + I AL G ++ DR+ S A + Sbjct: 64 LQLEPHAAHLLYIANRWERQDE-ISSALKAGISVVVDRYSYSGIANTAAKFHPLSEFDWK 122 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + + PD I L + S+RE+ FE + ++ + Sbjct: 123 WCRSMEYGLLQPD--FIFCLAPEN-----FAEISVREAFSDKKFE--TMDFQKRILIYYG 173 Query: 179 DIARN--------------QPDRCHIVDSA-HSFQSVATNILNIVWELV 212 ++R +P H + + + + I++I+ + Sbjct: 174 RLSREMESELSENDDTKDHEPRLWHWIPATGQTVDETHSCIMSIIDSKL 222 >gi|262203512|ref|YP_003274720.1| thymidylate kinase [Gordonia bronchialis DSM 43247] gi|262086859|gb|ACY22827.1| thymidylate kinase [Gordonia bronchialis DSM 43247] Length = 211 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 10/188 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLL-SCGVD 60 G I+ EG++GAGK T ++ L R+ V P G + A+ A L + G Sbjct: 2 GELIAVEGLDGAGKNTLVTGLVDEWTRRGARVATFTFPRYGRSLTADIASEALHGNHGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLD 118 A A++FA R V + A ++L DR++ S+ AY R + + Sbjct: 62 RESVYAMALLFALDRSAAVAEIAAAAEAADVVIL-DRYVASNAAYSAARLHQDADGEVVR 120 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + ++ + PD I+L +P + + R ++R S S D++ER D + + Sbjct: 121 WVADLEFGRLGLPAPDRQILLGVPAETAMARAESRASADASRARDHYER-DSDLQHRVDA 179 Query: 176 IFLDIARN 183 ++ +A Sbjct: 180 VYRRLADA 187 >gi|321474134|gb|EFX85100.1| hypothetical protein DAPPUDRAFT_46657 [Daphnia pulex] Length = 149 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 72/164 (43%), Gaps = 20/164 (12%) Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++F+A R + + + I+ L + ++ DR+ +S A+ + ++ L Q Sbjct: 4 IDDHAIHLLFSANRWELLPD-IKKLLQKSTNIIVDRYSNSGIAFSAAK---PNMDLRWCQ 59 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD I L + + R + +E ++ + + R +L + Sbjct: 60 QSESGLLKPDLVIFLGIDLVEAQTR----------GQYERYE--NLEMQKVVRSNYLKL- 106 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 Q + C +VD++ S + V ++ +V E + ++P S+ K + Sbjct: 107 --QDETCRVVDASRSMEEVGRDVCRLVQEAL-DNITPDSALKQL 147 >gi|159037580|ref|YP_001536833.1| dTMP kinase [Salinispora arenicola CNS-205] gi|157916415|gb|ABV97842.1| dTMP kinase [Salinispora arenicola CNS-205] Length = 227 Score = 102 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 84/212 (39%), Gaps = 19/212 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---SCGVDEF 62 FI EG++G GKTT L R + + AA+AA ++ D Sbjct: 6 FIVIEGLDGTGKTTVRKGLFRLWEGLYEVTPLCILTSNFLAADAAADIVKGKYQPSADNR 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +A+ A + + ++RPAL + ++ DR+L S A+ + + ++ + Sbjct: 66 DRYLQAL--VADKAATLARLVRPAL-PNRPVISDRWLVSELAFFAVKHDMKPG--ETYER 120 Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ P D T++LDL L+R R A D + + + RQ++ +I Sbjct: 121 LAAGITQPVDLTLVLDLDPRDSLQRAHGRQGDAVRADWDV-----LDVQARVRQVYTEIV 175 Query: 182 ---RNQP--DRCHIVDSAHSFQSVATNILNIV 208 P +D++ S V + + Sbjct: 176 SEPAAYPLLGEVAHIDASASPGGVLDQVWQAL 207 >gi|94490065|gb|ABF29151.1| thymidylate kinase [Variola virus] Length = 205 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCINIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160 Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 + I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGEDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 201 >gi|94488256|gb|ABF27351.1| thymidylate kinase [Variola virus] gi|94488456|gb|ABF27550.1| thymidylate kinase [Variola virus] gi|109726240|gb|ABG45356.1| thymidylate kinase [Variola virus] Length = 205 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 48/222 (21%), Positives = 81/222 (36%), Gaps = 23/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSCGALIVFEGLDKSGKTTQCMNIMESIPTN--TIKYLNFPQRSTVTGKMIDDYLTRK-K 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++F A R + + I+ L +G L+ DR+ S AY + +S L Sbjct: 58 TYNDHIVNLLFCANRWE-FASFIQEQLEQGITLIVDRYAFSGVAYATAKGASMTLS---- 112 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I L + G K + NR E +DV +K Q + + Sbjct: 113 KSYESGLPKPDLVIFL----ESGSKEI-NRNVGEEIY-------EDVAFQQKVLQEYKKM 160 Query: 181 ARN-QPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLS 220 + I+ S+ + V I NIV E + P+ Sbjct: 161 IEEGEDIHWQII-SSEFEEDVKKELIKNIVIEAIHTVTGPVG 201 >gi|330469772|ref|YP_004407515.1| thymidylate kinase [Verrucosispora maris AB-18-032] gi|328812743|gb|AEB46915.1| thymidylate kinase [Verrucosispora maris AB-18-032] Length = 224 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 72/213 (33%), Gaps = 17/213 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT LL L +D R GG AA + G + + Sbjct: 5 GIDGSGKTTQAQLLADTLTEAGHDATYHRNAGGRRWLGRAAHRLGRPDAQRLLGRDGMLL 64 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEISVQEV 128 V + R + + + G+ + DR+ YA + + + I Sbjct: 65 VESVLRWLAIAAALLTSWATGRTAIMDRYAVCQYASLRAHGGRRWERLVRAAYRI---FP 121 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 P T ++ + +R++ R + +++ + + + P Sbjct: 122 QPQVTFLMAVDPAEAYRRIERRGT----------DQESLTYLAAADHAYRTL-PEYP-TF 169 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 ++D+A VA I + + SP + Sbjct: 170 VVIDAARPAHEVAREIRGHLAGWLAAEDSPSGT 202 >gi|227502887|ref|ZP_03932936.1| thymidylate kinase [Corynebacterium accolens ATCC 49725] gi|306835486|ref|ZP_07468503.1| thymidylate kinase [Corynebacterium accolens ATCC 49726] gi|227076617|gb|EEI14580.1| thymidylate kinase [Corynebacterium accolens ATCC 49725] gi|304568652|gb|EFM44200.1| thymidylate kinase [Corynebacterium accolens ATCC 49726] Length = 204 Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 8/209 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS EGI+GAGK T + ++ L+ + R A A + G A Sbjct: 1 MLISIEGIDGAGKNTLATAVRSALEVPVRTIAFPRYETSIHAQLAREALYGKMGDLTDSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLDSLQE 122 A +FA R ++ +R A +I++ DR++ S+ AY R L ++ L+ Sbjct: 61 YGMATLFALDRFG-IKEELRAAKETREIVILDRYVASNAAYSAARLRDDSLFQWVYDLEF 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ D + +D V++ R Q+R + + D++ER D + E+ + + Sbjct: 120 GTLGLPKADLQVYVDTAVEVASARAQSRAATDSTRERDHYER-DGGLQERTAAAYRRLVE 178 Query: 183 N-QPDRCHIVDSAHSFQSVATNILNIVWE 210 + R + ++ I ++V + Sbjct: 179 SGWGGRWI---ATADADTITAAINDLVGD 204 >gi|209965955|ref|YP_002298870.1| thymidylate kinase [Rhodospirillum centenum SW] gi|209959421|gb|ACJ00058.1| thymidylate kinase, putative [Rhodospirillum centenum SW] Length = 220 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 81/222 (36%), Gaps = 22/222 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDE-- 61 + I+ EGI+GAGK T + L + T P G A LL+ G +E Sbjct: 1 MLIAIEGIDGAGKRTLTDAVATLLAERGLTCSATSFPQYGRTRAARGVQDLLNLGPEELA 60 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGER-----DSSQH 114 A +A R + + L G ++L DR++ S+ AYQ R Sbjct: 61 RIDPREAAAWYALDRFE--SRGLLAGLRAGHDVVLIDRWIASNIAYQRARAPAAEGPGLE 118 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE--SACLDYFERKDVMIHEK 172 ++ SL+ +PD T+++ + + R R+ D E + + + Sbjct: 119 AWILSLETGLYGLPVPDATVLV-ATPETAAADLIRRKGGRDYTDKAFDALEA-NRALQAR 176 Query: 173 RRQIFLDIARN-QPDRCHIV----DSA-HSFQSVATNILNIV 208 + D+A R ++ D +A ++ + Sbjct: 177 VLATYHDLAARGVLGRWIVLHPVRDGTLRPPADLAAEVVAAL 218 >gi|226372878|gb|ACO52064.1| Probable thymidylate kinase 1 [Rana catesbeiana] Length = 424 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 24/209 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++ GK+T LK+ L+ + R P + + R A Sbjct: 231 IVIEGLDATGKSTLTESLKQHLKA-----TLLRSPPDSISRW--RKTFDDETSLIKRAYY 283 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFL----DSLQ 121 + AA + + P ++ DRF S+ AY L + Sbjct: 284 ALSNYVAAVDIAKASEVSP-------VIVDRFWHSTAAYAIATEIGGNIQNLPDHHHVVY 336 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + PD I+L + + + R++ R + E + +K + + + Sbjct: 337 QWPEDLLKPDLVILLTVSDEERIHRIRKRGLQETQEEKE-LEANSM-FRQKVEEAYRRM- 393 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 P C ++D+ S ++V N L+I+ Sbjct: 394 -ENPG-CVVIDAGASREAVLKNTLSIIKR 420 >gi|75758384|ref|ZP_00738507.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494110|gb|EAO57203.1| Thymidylate kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 204 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 76/211 (36%), Gaps = 17/211 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFGAE 65 I+ EG++ +GK + L L + Y+V + TP R L G G Sbjct: 4 IALEGLDKSGKKSQADKLHEALYERGYNVEQSEFHRYDTPTGGLIRQFL--DGEYNPGQL 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + AA + + N + +L+ DR+L S Y + L + Sbjct: 62 AIECIMAADKYAQL-NWFEELAEKLDVLILDRYLVSQLVYSTANGVDIDFTANLLDRM-- 118 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--N 183 P+ I LD+ + +KR D +E D + + R ++L + Sbjct: 119 --PEPNFQIFLDIEPEESMKRKGK------HGENDKYES-DKELLTRARDLYLRYMKLEE 169 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + I+D + + + IL L+ + Sbjct: 170 EDGNAMILDGTLAVEELHQQILERTLSLLTE 200 >gi|207723641|ref|YP_002254039.1| hypothetical protein RSMK01034 [Ralstonia solanacearum MolK2] gi|206588844|emb|CAQ35806.1| conserved hypothetical protein [Ralstonia solanacearum MolK2] Length = 216 Score = 100 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 27/225 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 I+FEGI+G+GKTT +LL L P EA + G + Sbjct: 7 KRATLITFEGIDGSGKTTAATLLVERLAAHGVKTIFHPNRSLAPVREALDALAQEDGYSD 66 Query: 62 FGAEAEAIVFAAARLDHVENVIR--------PALM-EGKILLCDRFLDSSYAYQGERDSS 112 +F A + + V++ P L E ++++ DR+ + + ++ Sbjct: 67 -----RFGLFGAGNMQFLAAVMKWRELLDLRPLLEREDQVVVLDRYFYTHLSLATTHATT 121 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L L +I PD T+ +D+ + +RV R R+ +DY + Sbjct: 122 NSAHLRRLFKI---FPTPDITLFMDIDPKLAGERVLKRG--RDVNAVDYL--------AR 168 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + + + V + +V +I V + ++ Sbjct: 169 LHDGYQSLPEFDQFQKVAVTGDATPATVLDDIWARVAPKLAHLLA 213 >gi|29841168|gb|AAP06181.1| similar to Chain A, Mutant Human Thymidylate Kinase F105y complexed With Dtmp And Appnp [Schistosoma japonicum] Length = 219 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 15/186 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58 + GLF+ FEG+E GK T LL+ L + + P TP + G Sbjct: 5 IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFL 117 + A ++ A R + + I AL G ++ DR+ S AY + Sbjct: 63 KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAKFHPLSDADW 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + + PD I L + S+R+S+ + FE + ++ F Sbjct: 122 KWCRSVEYGLLQPD--FIFCLAPEN-----FAEISVRDSSGGNKFE--TMDFQKRVLTYF 172 Query: 178 LDIARN 183 ++R Sbjct: 173 GRLSRE 178 >gi|290958501|ref|YP_003489683.1| thymidylate kinase [Streptomyces scabiei 87.22] gi|260648027|emb|CBG71135.1| putative thymidylate kinase [Streptomyces scabiei 87.22] Length = 204 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 75/207 (36%), Gaps = 23/207 (11%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG---VDEFG 63 S +GI+G+GK+T + + L E G L Sbjct: 3 SIDGIDGSGKSTQVGRVAAALTAAGVRAEPAVVEAFGARTVNTLAERLTGDPYAYHPAIP 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR----FLDSSYAYQGERDSSQHLFLDS 119 E VFA + P L EG L+ DR + S+ AY G D S Sbjct: 63 VELREWVFACDVAYFTKTRFPPLLAEGITLVWDRGPLSYHASAVAYDGLSDWVGRA--QS 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L P T +LDLP + ++R++ R R+ + V + + + L Sbjct: 121 LY------PRPHRTYLLDLPAETAVRRLKERAGKRQRTD------ESVDLLRQVQGHMLG 168 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILN 206 +A+N+PD ++D+ + IL Sbjct: 169 MAKNRPD-VVVLDATRDPDEITGQILR 194 >gi|15866136|gb|AAL10206.1|AF410884_2 thimidylate kinase [Mycobacterium avium subsp. paratuberculosis] Length = 210 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 79/223 (35%), Gaps = 35/223 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--------PGGTP-------AAEA 49 + I+ EG++GAGK T L++ + V P P A Sbjct: 1 MLIAIEGVDGAGKRTLAEGLRKAFEAAGQSVATLAFRVTGAPVPPTSRPRRCTASTATWR 60 Query: 50 ARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 R C G A F A R DH +++ DRF+ S+ AY R Sbjct: 61 CRCTRWRCSSRWTGPGAWGT-FKALRRDH------------HVVIMDRFVASNAAYTAAR 107 Query: 110 --DSSQHLFLDSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 + + + + + PD ++L + ++ +R ++R D +ER Sbjct: 108 LHQDADGPAVAWVHTLEYGRLKLPAPDRQVLLAVSAELAAERARSRAESDPGRARDSYER 167 Query: 165 KDVMIHEKRRQIFLDIARN-QPDRCHIVDSAHSFQSVATNILN 206 D + ++ ++ +A +VD+ +A ++ Sbjct: 168 -DDGLQQRTGAVYAQLAAAGWGGAWRVVDADVDPARLAADLAA 209 >gi|300779615|ref|ZP_07089471.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030] gi|300533725|gb|EFK54784.1| thymidylate kinase [Corynebacterium genitalium ATCC 33030] Length = 208 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 8/187 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDE 61 + ++ EGI+GAGK T + L R L + P + A L + + Sbjct: 1 MIVALEGIDGAGKNTLVQKLIRELGATDRIDSAATMAFPRYNESLHAQLAADALHGKMGD 60 Query: 62 FGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFL 117 A A++FA R V + + A +LL DR++ S+ AY R ++ Sbjct: 61 LTDSAHGMAVMFALDRYGVVGELWQWASSPSDVLLLDRYVASNAAYTSARTGRIDDRAWV 120 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L+ + P +++D D R ++R S D +ER D + + + Sbjct: 121 AGLEFDRLGLPRPALQVLVDTAPDTARARARSREQADASRARDRYER-DASLQDATYAAY 179 Query: 178 LDIARNQ 184 ++A Sbjct: 180 AEMAETN 186 >gi|94971971|ref|YP_594011.1| thymidylate kinase-like [Deinococcus geothermalis DSM 11300] gi|94554022|gb|ABF43937.1| thymidylate kinase [Deinococcus geothermalis DSM 11300] Length = 436 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 80/220 (36%), Gaps = 22/220 (10%) Query: 3 SGLFISFEGIEGAGKTTHI----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 +GL ++F G +GAGK++ I + + +R G P+ EA Sbjct: 230 TGLCVAFLGPDGAGKSSVIAEVENKVAPAFRRLKRYHLRPSFGRGHPSGEAVSDPHGKAP 289 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + A+ +++ A +R L+ +++ DR+ +L Sbjct: 290 RGSGSSLAKLLLWLADYTVGSVPAVRLPLVRSTLVIFDRYYHDLLVDARRYRYGGPAWLA 349 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L +V PD I LDLP ++ R + + R+ + Sbjct: 350 GLVGRAV--PRPDLFIFLDLPAEVAHARKPE---------------VPLEEGRRLRERYR 392 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 +AR P+ H+VD+ VA + I+ +QKR Sbjct: 393 QLARQLPN-AHVVDAERPLDEVAREVETIILHHLQKRTGK 431 >gi|216906057|ref|YP_002333648.1| thymidylate kinase [Abalone shriveling syndrome-associated virus] gi|216263150|gb|ACJ71974.1| thymidylate kinase [Abalone shriveling syndrome-associated virus] Length = 270 Score = 99.3 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 10/128 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +FI+ EGI+ GK+T L+R + + + +T EP + L + Sbjct: 1 MFITIEGIDKIGKSTVAQGLQRKFSQYSDNSIVLTHEPFNFNG---LSNFLKK---YQLS 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---L 120 ++ E ++ AAR++H +I PA+ G I++CDRF+DS+ YQG L + L Sbjct: 55 SKVEILIQTAARIEHATRLINPAISSGSIVICDRFIDSTIVYQGICCCDGISDLAAKHEL 114 Query: 121 QEISVQEV 128 I V Sbjct: 115 NNILTGFV 122 >gi|194211528|ref|XP_001497832.2| PREDICTED: similar to deoxythymidylate kinase (thymidylate kinase) [Equus caballus] Length = 218 Score = 99.3 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 16/170 (9%) Query: 44 TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 T + L +E + ++F+A R + V +I+ L +G L+ DR+ S Sbjct: 53 TDIGKLLSSYL--EKKNEMENHSVHLLFSANRWEQVP-LIKEKLSQGVTLIVDRYAFSGV 109 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 AY + LD ++ V PD + L L + R + +E Sbjct: 110 AYTSAK---ADFSLDWCKQPDVGLPKPDLVVFLQLQLAEAAMR--------GEFGRERYE 158 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + E Q F + + +VD++ S + V I + + +Q Sbjct: 159 NRT--FQESVSQRFHQLMGDTTLNWKMVDASQSIEDVHKEIRELSEDTIQ 206 >gi|317508027|ref|ZP_07965717.1| thymidylate kinase [Segniliparus rugosus ATCC BAA-974] gi|316253689|gb|EFV13069.1| thymidylate kinase [Segniliparus rugosus ATCC BAA-974] Length = 209 Score = 98.9 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 74/187 (39%), Gaps = 11/187 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEF 62 + I+ EG++GAGK T S L + + V P G + A+ A L Sbjct: 1 MLITVEGLDGAGKNTLTSALSETWRGRGLRVAKMAFPRYGQSVHADVAAESLRGDFDGRI 60 Query: 63 --GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A++FA R + + L ++LCDR++ S+ AY R + Sbjct: 61 AADPLGMALLFALDRYEAKGEL-EALLGAHDVVLCDRYVASNAAYGAARLGEDATGPFAA 119 Query: 121 QEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + PD ++L P + +R + R + D +ER D + E+ Sbjct: 120 WVLAFEFGRLGLPKPDHQLLLATPPGLAAERARWRAASDPGRERDAYER-DAPLQERVGA 178 Query: 176 IFLDIAR 182 ++ +A Sbjct: 179 VYAGLAE 185 >gi|111220154|ref|YP_710948.1| thymidylate kinase [Frankia alni ACN14a] gi|111147686|emb|CAJ59342.1| Thymidylate kinase (dTMP kinase) [Frankia alni ACN14a] Length = 214 Score = 98.6 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 21/203 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT--PAAEAARHVL---LSCGV 59 + I+ EG++GAGK T L L V P P A R +L Sbjct: 1 MIIAIEGVDGAGKNTLTGRLVARLTDAGRSVATLAYPRYDAEPLGPAMRGLLGGDARLAP 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGER-----D 110 A A++FA R RPAL +++ DR++ S+ AY R Sbjct: 61 LAAAPRATAMMFALDRAAS-----RPALDALTDANDVVILDRYIASNAAYGAARLPAAER 115 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + ++ L+ S+ PD ++L +PV R LD FE D + Sbjct: 116 AGFPAWVADLELGSLALPAPDLQVLLRVPVAKARAGAAARAGDDPDRPLDAFES-DGGLQ 174 Query: 171 EKRRQIFLDIARNQ-PDRCHIVD 192 E+ +++ D+A IVD Sbjct: 175 ERCARMYEDLAARNWISPWLIVD 197 >gi|82915445|ref|XP_729074.1| thymidylate kinase [Plasmodium yoelii yoelii str. 17XNL] gi|23485911|gb|EAA20639.1| Thymidylate kinase [Plasmodium yoelii yoelii] Length = 146 Score = 98.6 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 2/109 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI FEG++ +GK+T L +L+ N V P L Sbjct: 12 LKRGNFIVFEGVDRSGKSTQSKLFVEYLKNNNIQVQHLCFPNRETTIGKIITNYLKMEST 71 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 F E ++F+A R + ++ I+ L+ G ++CDR S Y Sbjct: 72 -FSNETIHLLFSANRWEMMDQ-IKNLLINGVWVICDRXXYSGVXYSSGA 118 >gi|330835060|ref|YP_004409788.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4] gi|329567199|gb|AEB95304.1| thymidylate kinase-like protein [Metallosphaera cuprina Ar-4] Length = 209 Score = 97.4 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 28/222 (12%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTPAAEAARHVLLSCGV 59 G+ I+ EG EG+G+T H++ LK FL+ + Y V + G P A R ++ Sbjct: 3 GMIIALEGAEGSGRTFHVNSLKSFLEEEGYGVITFGLGLSKLMGEPIARKKRDIV----- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F + + D VENV++P+L G + + D ++ + A+ R + Sbjct: 58 --FQRRTLFLAYVTDLADQVENVVKPSLKAGFVAIADGYVSTLMAWGMTRGLEPSWMKEV 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHEKRR 174 L + + ++ L D ++R+ LR+ LD F + + R Sbjct: 116 LNAL----PKSNLSLGLVSSPDEIMRRI-----LRKKGTLDPFSSGIDVCINGELFSSYR 166 Query: 175 QIFLDIARNQPDRCH---IVDSAHSFQSVATNILNIVWELVQ 213 Q + N + IVD+ SF+ V I IV ++ Sbjct: 167 QYLENFQTNLIEVMKDGTIVDTGRSFEVVKDEIAKIVGGRLE 208 >gi|302869481|ref|YP_003838118.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] gi|302572340|gb|ADL48542.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] Length = 248 Score = 96.6 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI+G+GKTT L + L R GG + +V Sbjct: 21 GIDGSGKTTQAHRLAQALTAAGRPATYHRNAGGRRWLGRIAQRVGRPDAQRLVGRDGLLV 80 Query: 71 F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISVQEV 128 + R + + L+ G+ + DR+ YA + L I Sbjct: 81 VESVLRWLAIALALLSCLVTGRTAVMDRWSACQYASIRAHGGQRWERLARAGYRI---FP 137 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD-- 186 P T +L + +R++ R + + + + + D+ P+ Sbjct: 138 APRVTFLLTVDPAEAYRRIERRGT----------DHETMEWLTAAAAAYRDL----PEYG 183 Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212 +VD + VA I + E + Sbjct: 184 SFVVVDGTGPPEEVARRIRAHLSEWL 209 >gi|315504056|ref|YP_004082943.1| thymidylate kinase [Micromonospora sp. L5] gi|315410675|gb|ADU08792.1| thymidylate kinase [Micromonospora sp. L5] Length = 248 Score = 96.6 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 64/206 (31%), Gaps = 21/206 (10%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI+G+GKTT L + L R GG + +V Sbjct: 21 GIDGSGKTTQAHRLAQALTAAGRPATYHRNAGGRRWLGRIAQRVGRPDAQRLVGRDGLLV 80 Query: 71 F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISVQEV 128 + R + + L+ G+ + DR+ YA + L I Sbjct: 81 VESVLRWLAIALALLSCLVTGRTAVMDRWSACQYASIRAHGGQRWERLARAGYRI---FP 137 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD-- 186 P T +L + +R++ R + + + + + D+ P+ Sbjct: 138 APRVTFLLTVDPAEAYRRIERRGT----------DHETMEWLTAAAAAYRDL----PEYG 183 Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212 +VD + VA I + E + Sbjct: 184 SFVVVDGNGPPEEVARRIRAHLSEWL 209 >gi|213024834|ref|ZP_03339281.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 68 Score = 96.6 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 23/68 (33%), Positives = 38/68 (55%) Query: 84 RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG 143 +PAL +G ++ DR S+ AYQG L +L++ + + PD T+ LD+ ++G Sbjct: 1 KPALAQGVWVIGDRHDLSTQAYQGGGRGIDQTMLATLRDAVLGDFRPDLTLYLDVTPEVG 60 Query: 144 LKRVQNRY 151 LKR + R Sbjct: 61 LKRARARG 68 >gi|149411455|ref|XP_001513078.1| PREDICTED: similar to THAP domain-containing protein 4 [Ornithorhynchus anatinus] Length = 670 Score = 96.6 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 70/176 (39%), Gaps = 15/176 (8%) Query: 39 REPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + P + L ++ ++F+A R + V +++ L +G L+ DR+ Sbjct: 498 KYPQRSTEIGKLLSSYLERKIN-LEDHTVHLLFSANRWEQVP-LMKEKLNQGITLIVDRY 555 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 S A+ + ++ LD ++ V PD + L L R S Sbjct: 556 AFSGVAFTSAK---ENFSLDWCKQPDVGLPKPDLILFLQLSTVEAATR--------GSFG 604 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +E + EK Q F + +++ ++D++ + + + I ++ E +++ Sbjct: 605 TERYE--NNAFQEKALQSFHKLMKDKTLNWKVIDASKNIEDLHKEIHHLSKEAIKE 658 >gi|301611086|ref|XP_002935074.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Xenopus (Silurana) tropicalis] Length = 459 Score = 96.2 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 32/219 (14%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G + I EG++ GK+T L+ L+ + R P +S Sbjct: 259 KKGRYPVIVIEGLDATGKSTLTESLRDCLKA-----TLLRSPPDC----------ISKWR 303 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 F E I +AA + + ++ ++ DR+ S+ AY + +L Sbjct: 304 KTFDDEPSLIKRAYYAAGNYIGACEIAKASMDSP--VIVDRYWHSTAAYAIATEIGGNLP 361 Query: 117 L-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + + + PD I+L + + + R++ R + + M Sbjct: 362 SLPHCGHDIYQWPQDLLRPDLVILLTVSDEERMLRMRGRGLEETKEEKEL--ESNTMFRL 419 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 K + + I P C I+D++ +SV LN++ + Sbjct: 420 KVEEAYKRI--ENPQ-CVIIDASPPKESVLKETLNVIRK 455 >gi|254671909|emb|CBA04216.1| Thymidylate kinase [Neisseria meningitidis alpha275] Length = 81 Score = 96.2 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD T++LD+P+++ + R+ S D FE++ + R ++L+ A P+R Sbjct: 2 RPDLTLLLDVPLEVSMARIGQ------SREKDRFEQEQADFFMRVRSVYLNRAAACPERY 55 Query: 189 HIVDSAHSFQSVATNILNIV 208 I+DS S V NI ++ Sbjct: 56 AIIDSNRSLDEVRNNIEKVL 75 >gi|161407223|ref|YP_638514.2| thymidylate kinase [Mycobacterium sp. MCS] Length = 210 Score = 96.2 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 15/203 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVD-E 61 + I+ EG++GAGK T + ++ + V P + A+ A L D Sbjct: 1 MLIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLA 60 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLF 116 A A++FA R D + I +++ DR++ S+ AY R D + Sbjct: 61 ESVYAMAVLFALDRADARDE-IAHLAAAHDVVILDRYVASNAAYSAARLHQSADGEAVEW 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + SL+ + D I+LD+P + +R + R D +ER D + + ++ Sbjct: 120 VRSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYER-DDGLQRRTGEV 178 Query: 177 FLDIARNQP-DRCHI----VDSA 194 + +A R + VD+A Sbjct: 179 YQALAATDWCGRWIVAGPDVDAA 201 >gi|209515281|ref|ZP_03264148.1| thymidylate kinase [Burkholderia sp. H160] gi|209504262|gb|EEA04251.1| thymidylate kinase [Burkholderia sp. H160] Length = 238 Score = 95.9 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 23/231 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVD-- 60 G+ ++ G++GAGK++ + L+ R + T P + R ++ S Sbjct: 18 GVLVTLCGVDGAGKSSLMERLEGACTRAGLNCVTTFTPTRRIRKDEVFRQLVDSHWHTSS 77 Query: 61 --------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + + H+ + + PAL G ++ CDR++ +S A G S Sbjct: 78 SGPDASARRVDMLGILLSIMGDLVQHMSDTVIPALERGDVVFCDRYVFTSQAEIGT-RSD 136 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L I+ + PD L++ +RV+ R + + + Sbjct: 137 PAETAPVLHSIAGYLLRPDVAFGLNVSGATSHRRVRARNDENDQPPP-------MSFLMR 189 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW--ELVQKRVSPLSS 221 + + + +D+ S L+ + E V +R +++ Sbjct: 190 QVAAYRAVFEVNG--VVALDAERSIDETFCAALSHIVAIERVARRSGSMAA 238 >gi|111223133|ref|YP_713927.1| putative thymidylate kinase [Frankia alni ACN14a] gi|111150665|emb|CAJ62366.1| putative Thymidylate kinase (dTMP kinase) [Frankia alni ACN14a] Length = 263 Score = 95.9 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 15/213 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I+ G++G GKTT L R L GG P + R + G D G Sbjct: 10 IALLGVDGVGKTTQARRLARTLTAAGQPASYFENGGGRPLLDPLARRLGRRDGPDLLGRR 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDSLQEI 123 V A R + + + + G+I + DR+ YA G R + ++ Sbjct: 70 VHVAVEATYRGLAITRALALSRLTGRIAVMDRYTYCQYAVMGLRGDGTGDDDGARRVRAA 129 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +PD ++ P + +RV+ R E LD + + D+ Sbjct: 130 YRRFPLPDLVVLFTAPATLAQQRVERRGRDHE--DLDRL----TAF----AEAYRDLPEA 179 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 H + ++ + V + +V E + +R+ Sbjct: 180 AA--FHELPASGTPDEVHAVLYPLVTEALGRRL 210 >gi|326202523|ref|ZP_08192391.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] gi|325987107|gb|EGD47935.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] Length = 230 Score = 95.5 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 30/226 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58 +G+ I FEGI G GK+ + +L+++L Y V + + LL+ G Sbjct: 11 NGMLIVFEGISGCGKSESVRVLRKYLTDNGYKTSVLEWNSNRVIRNIIKRIDSKKLLTPG 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + F ++ + P L + +L+ DR++ + + + Sbjct: 71 IYSFFQWVSFLIDYLF-------KVLPLLKKNYVLIADRYIYTGLTRDSVNGAGGKIG-R 122 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDY----FERKDVMIHEKR 173 L + P LD+ + +R++ R L + L + K++ K Sbjct: 123 LLHRFV---IKPTMVFFLDVSPEECDRRIKKRGKDLFHTNKLIRENKLLKNKELYYLNKL 179 Query: 174 RQIFLDI----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 R +L + A V+ ++ V + + R Sbjct: 180 RDEYLLLINSKAIQNETNIITVNEDSDI------VVKCVNDYISGR 219 >gi|159039489|ref|YP_001538742.1| thymidylate kinase [Salinispora arenicola CNS-205] gi|157918324|gb|ABV99751.1| thymidylate kinase [Salinispora arenicola CNS-205] Length = 237 Score = 95.5 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 64/212 (30%), Gaps = 27/212 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ GI+G+GKTT L L R GG L Sbjct: 17 IALIGIDGSGKTTQARRLAAALTGAGLPATYHRNAGGRRFLGRVARRLGRPDPQRLLGRT 76 Query: 67 EAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +V + R + L+ G++ + DR+ YA + L L Sbjct: 77 GLLVAESVLRWLAIAAARLSRLLTGRVAVMDRYSACQYASIRAHGGHRWERLARLGYRV- 135 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-- 183 P T +L + +R++ R + HE R +L A Sbjct: 136 -FPRPQVTFLLTVDPAEAYRRIERRGTD----------------HESMR--YLTAADRAY 176 Query: 184 ----QPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +VD++ V+ I + V Sbjct: 177 RTLPEHHTFVVVDASGPADEVSRRIRDHVDGW 208 >gi|325002113|ref|ZP_08123225.1| thymidylate kinase [Pseudonocardia sp. P1] Length = 212 Score = 95.1 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 11/188 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS-CGVD 60 G + EG++GAGK T L L+ V P AE AR L G Sbjct: 2 GRLVVIEGLDGAGKRTFAGRLTAALRAGGATVTSAAFPRYDDDVHAELARDALYGRMGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118 A A++FA R D + R +L ++L DR++ S+ AY R + Sbjct: 62 ASSVHAMAVLFALDRRDAAAGL-RASLGTHDVVLVDRYVASNAAYNAARLGQDARGEVVG 120 Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++E+ + +PD ++L P L E+ D +E D + + Sbjct: 121 WVRELEIDRFGIPVPDHQLLL-APPRAVAAERARARELTEARQRDAYES-DDALQARTDA 178 Query: 176 IFLDIARN 183 ++ +A Sbjct: 179 VYRQLADA 186 >gi|146303756|ref|YP_001191072.1| thymidylate kinase-like protein [Metallosphaera sedula DSM 5348] gi|145702006|gb|ABP95148.1| Thymidylate kinase-like protein [Metallosphaera sedula DSM 5348] Length = 210 Score = 95.1 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 94/220 (42%), Gaps = 22/220 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGV 59 G I+ EG EG+G+T H+S LK +L+ + Y V G P ++ R ++ Sbjct: 3 GKIIALEGSEGSGRTYHVSSLKTYLEEQGYGVVTFGLGMSRLMGEPISKKKRDIV----- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F + + D +EN ++P + G + + D ++ + A+ G + +++ Sbjct: 58 --FQRRTLFLAYVTDLADQIENEVKPMVKAGFLAIADGYVSTLKAW-GLARGLEEEWMNY 114 Query: 120 LQEISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRE--SACLDY-FERKDVMIHEKRR 174 + +P + L L ++R+ + + + S+ +D + +E Sbjct: 115 V-----LSALPHANLSLGLVSSPREIMRRILKKKGVLDPLSSGIDICINGELFSSYETYL 169 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 F D R IVD++ +F+ V + I IV + ++K Sbjct: 170 NTFQDYLRKVIQNGVIVDTSRNFEVVKSEIATIVGDRIEK 209 >gi|303398720|emb|CBW46701.1| A240L [African swine fever virus Georgia 2007/1] Length = 236 Score = 94.7 bits (235), Expect = 7e-18, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 73/207 (35%), Gaps = 27/207 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G+ I+ EGI G GK+T LK L+ +Y+ P T + VL E Sbjct: 2 RGILIAIEGINGVGKSTQAMKLKETLECMDYNAICIHFPNPDTTTGDLILQVL--NKTIE 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E +F R + + I L I++ DR++ S Y + +++ Sbjct: 60 MSSEQLHKLFTKHRSEFIAE-IAVLLKLNYIVIVDRYIWSGLVYAQA----DGITIET-- 112 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180 PD T L + + L FE K+ E F I Sbjct: 113 ---KNTFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157 Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206 + P +R I+ + + + + IL Sbjct: 158 MDDVPKNRFCIIPATLNKEIIHMIILT 184 >gi|119867414|ref|YP_937366.1| thymidylate kinase [Mycobacterium sp. KMS] gi|108768736|gb|ABG07458.1| thymidylate kinase [Mycobacterium sp. MCS] gi|119693503|gb|ABL90576.1| thymidylate kinase [Mycobacterium sp. KMS] Length = 229 Score = 94.7 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 15/202 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVD-EF 62 I+ EG++GAGK T + ++ + V P + A+ A L D Sbjct: 21 LIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGRHGDLAE 80 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLFL 117 A A++FA R D + I +++ DR++ S+ AY R D ++ Sbjct: 81 SVYAMAVLFALDRADARDE-IAHLAAAHDVVILDRYVASNAAYSAARLHQSADGEAVEWV 139 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL+ + D I+LD+P + +R + R D +ER D + + +++ Sbjct: 140 RSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYER-DDGLQRRTGEVY 198 Query: 178 LDIARNQP-DRCHI----VDSA 194 +A R + VD+A Sbjct: 199 QALAATDWCGRWIVAGPDVDAA 220 >gi|301775533|ref|XP_002923194.1| PREDICTED: thymidylate kinase-like [Ailuropoda melanoleuca] Length = 204 Score = 94.7 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 19/188 (10%) Query: 37 VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + R P + L + + ++F+A R + V +I+ L +G L+ D Sbjct: 31 LLRFPERSTEIGKLLSSYLEKKSE-VEDHSVHLLFSANRWEQVP-LIKKKLSQGITLVVD 88 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 R+ S A+ + ++ LD ++ V PD + L L + +R Sbjct: 89 RYAFSGVAFTSAK---ENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAARR--------GE 137 Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN----IVWELV 212 + +E + E+ F + ++ +VD++ S + V I + Sbjct: 138 FGRERYENGN--FQERALHRFHQLMADETLNWKMVDASKSIEDVHKEIHALSVGAIQAAA 195 Query: 213 QKRVSPLS 220 Q+ + L Sbjct: 196 QRPLGELW 203 >gi|20093541|ref|NP_613388.1| thymidylate kinase [Methanopyrus kandleri AV19] gi|73920824|sp|Q8TZ38|KTHY_METKA RecName: Full=Probable thymidylate kinase; AltName: Full=dTMP kinase gi|19886382|gb|AAM01318.1| Thymidylate kinase [Methanopyrus kandleri AV19] Length = 194 Score = 94.7 bits (235), Expect = 8e-18, Method: Composition-based stats. Identities = 48/227 (21%), Positives = 82/227 (36%), Gaps = 42/227 (18%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL++ EGI+G GK++ ++L FL+ +V REP EA + Sbjct: 2 GLYLGVEGIDGVGKSSVVNLAAEFLEIHGLEVTTVREPSTDIGREAL---------EWDD 52 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A+ F R+ ++ V ++L DR S+ AYQ + L E+ Sbjct: 53 PYLQALAFTLDRMLTLKRV---DFEAADVVLSDRTFLSTLAYQSA----LGADMRWLLEL 105 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 PD I+D R L E A D E+ R + + AR Sbjct: 106 QRPVPKPDVVYIID------------REPLAEDATFDK------EFLERVRNRYREAARL 147 Query: 184 QPDRCHI----VDSAH-SFQSVATNILNIVWELVQKRVSPLSSKKDI 225 + + +++ + +A I+ + PL D+ Sbjct: 148 IEEEFDVEIKWIEAEDMDKEEIAELIVADARRRLDD---PLGIPDDL 191 >gi|239788950|dbj|BAH71126.1| ACYPI007604 [Acyrthosiphon pisum] Length = 131 Score = 94.7 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 4/126 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG + +GKTT + L L P TP L E Sbjct: 7 RGALIVLEGCDRSGKTTQCAKLVEALNNMKIPAKKISFPDRSTPIGSLINDYL--SRKIE 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++F+A R + +E IR + G L+ DR+ S + + + + Sbjct: 65 LPDRSVHLLFSANRWE-LEPEIRKQIESGVTLIVDRYSYSGVVFTSAKQCVDFKWCLWAR 123 Query: 122 EISVQE 127 + Q Sbjct: 124 KWFTQS 129 >gi|238060711|ref|ZP_04605420.1| thymidylate kinase [Micromonospora sp. ATCC 39149] gi|237882522|gb|EEP71350.1| thymidylate kinase [Micromonospora sp. ATCC 39149] Length = 239 Score = 94.3 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 17/204 (8%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI+G+GKTT L L R GG L + + + Sbjct: 8 GIDGSGKTTQAHYLAEALTAAGRPATYHRNAGGRRWLGRIAQRLGRPDAERLVGRSGLLA 67 Query: 71 F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISVQEV 128 + R + + L+ G+ + DR+ YA + L I Sbjct: 68 VESVLRWLAIAVALVSCLVTGRTAVMDRYSACQYASIRAHGGQRWERLARAGYRI---FP 124 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 P T +L + +R++ R + E+ + D + + P Sbjct: 125 PPQVTFLLAVDPAEAYRRIERRGTDHETMG--WLSAADT--------AYRTL-PEFPS-F 172 Query: 189 HIVDSAHSFQSVATNILNIVWELV 212 +VD+ + V+ I + + Sbjct: 173 VVVDAGSPPEEVSRQIRAHLAAWL 196 >gi|295681475|ref|YP_003610049.1| thymidylate kinase [Burkholderia sp. CCGE1002] gi|295441370|gb|ADG20538.1| thymidylate kinase [Burkholderia sp. CCGE1002] Length = 250 Score = 94.3 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 82/233 (35%), Gaps = 25/233 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVD-- 60 G+ I+ G++GAGK++ + L+ + T P +A R ++ S Sbjct: 18 GVLITLCGVDGAGKSSLMKKLESACTGAGLNCVTTFTPTSRIRKDAVFRDMVDSHWHTSK 77 Query: 61 ----------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + + H+ + + PAL G ++ CDR++ +S A G R Sbjct: 78 ASLGADASVRRVDMLGILLSIMGDLVQHLTDTVIPALQRGDVVFCDRYVFTSQAEIGTRS 137 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L L+ ++ + PD L++ +RV++R + + Sbjct: 138 DPAETAL-VLRSVAGHLLRPDVAFGLNVCGATSHRRVRSRNDENDQPPP-------MSFL 189 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW--ELVQKRVSPLSS 221 ++ + + +D S L+ + E V R +++ Sbjct: 190 TRQVAAYRAVFEVNG--VVALDGERSIDETYCAALSHIVAIERVAGRFGSIAA 240 >gi|207110221|ref|ZP_03244383.1| thymidylate kinase [Helicobacter pylori HPKX_438_CA4C1] Length = 81 Score = 93.9 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 7/87 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG++GAGK+T + LLK + + T+EPGGT E+ R + L+ + Sbjct: 1 MYVVLEGVDGAGKSTQVGLLKDRFK----NALFTKEPGGTKIGESLRRIALN---ENISE 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK 91 A A +F + R +HVE+VI+PAL K Sbjct: 54 LARAFLFLSDRAEHVESVIKPALKRKK 80 >gi|126433982|ref|YP_001069673.1| thymidylate kinase [Mycobacterium sp. JLS] gi|126233782|gb|ABN97182.1| thymidylate kinase [Mycobacterium sp. JLS] Length = 229 Score = 93.6 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 83/202 (41%), Gaps = 15/202 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLL-SCGVDEF 62 I+ EG++GAGK T + ++ + V P + A+ A L S G Sbjct: 21 LIAIEGVDGAGKRTLTTGMRAAFEGAGRSVATLAFPRYHRSVTADLAAEALHGSHGDLAE 80 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----DSSQHLFL 117 A A++FA R D + I +++ DR++ S+ AY R D ++ Sbjct: 81 SVYAMAVLFALDRADARDE-IAHLAAAYDVVILDRYVASNAAYSAARLHQSADGEAVEWV 139 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 SL+ + D I+LD+P + +R + R D +ER D + + +++ Sbjct: 140 RSLEYDRLGLPAADWQILLDVPTALAAERAERRAEQEADRARDAYER-DDGLQRRTGEVY 198 Query: 178 LDIARNQP-DRCHI----VDSA 194 +A R + VD+A Sbjct: 199 KALAATDWCGRWIVAGPDVDAA 220 >gi|220929912|ref|YP_002506821.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10] gi|220000240|gb|ACL76841.1| Thymidylate kinase-like protein [Clostridium cellulolyticum H10] Length = 230 Score = 93.6 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 20/187 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCG 58 G+ I FEGI G GK+ + L+++L K Y V + + + LL+ G Sbjct: 11 KGMLIVFEGISGCGKSESVEALRKYLSDKGYKTSVLEWNSNKIIRKITKAIDSIKLLTPG 70 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 V F ++ + P L + IL+ DR++ + + + + Sbjct: 71 VYSFLQWIGFLIDYFF-------KVVPLLKKNYILIADRYIYTGLIRDSVNGAGRIIG-S 122 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL-----RESACLDYFERKDVMIHEKR 173 L I P LD+ ++ +R++ R R + K++ K Sbjct: 123 FLHRIVK---KPAMVFFLDVSPEVCDERIKKRGKALFHTNRLIWENKLLKNKELYYLNKL 179 Query: 174 RQIFLDI 180 R+ +L + Sbjct: 180 RREYLLL 186 >gi|159467729|ref|XP_001692044.1| hypothetical protein CHLREDRAFT_94429 [Chlamydomonas reinhardtii] gi|158278771|gb|EDP04534.1| predicted protein [Chlamydomonas reinhardtii] Length = 167 Score = 93.2 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 2/109 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I FEGI+ GK+T SLL LQ++ + R P T + L Sbjct: 48 RRGALIVFEGIDRCGKSTQCSLLLESLQKQGVPAELWRFPDRTTLIGGLINEYLQKKAS- 106 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 A ++F A R + + ++R L G L+ DR+ S AY + Sbjct: 107 LNDAAVHMLFVANRHEKRDEMLR-LLAGGTTLVLDRYSYSGVAYTAAKG 154 >gi|304314527|ref|YP_003849674.1| hypothetical protein MTBMA_c07660 [Methanothermobacter marburgensis str. Marburg] gi|302587986|gb|ADL58361.1| hypothetical protein MTBMA_c07660 [Methanothermobacter marburgensis str. Marburg] Length = 214 Score = 93.2 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 75/223 (33%), Gaps = 35/223 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAA---------- 47 MN G + GI+G+GKTT L K LQ N + + +P Sbjct: 1 MNKGKLVCLMGIDGSGKTTIARLFKERLQEMNRIKVEYVWCKFGYYSPLLRKLFCFIGII 60 Query: 48 ---EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSS 102 + R + G + + + H + +R +L GK ++CDR+L + Sbjct: 61 GKPDKLRGLNSISGNNFKNKIVYNLYLYFLLMTHYLTILNVRISLSLGKTVICDRYLPDT 120 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + + + L + PD + LP I +R + LDY Sbjct: 121 LVDLVLEFNQTYEDANKLLKKLYFTPKPDLLFYIRLPSKIAYERKKE-------NSLDYL 173 Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205 RK K I+ + + ++D + + I Sbjct: 174 NRK-----VKIYDIY-----SSKNEVVVLDGTKNPNELLNEIQ 206 >gi|296118803|ref|ZP_06837379.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306] gi|295968292|gb|EFG81541.1| dTMP kinase [Corynebacterium ammoniagenes DSM 20306] Length = 204 Score = 93.2 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 5/165 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ EGI+GAGK T +S L++ L + R A A + G A Sbjct: 1 MIIAIEGIDGAGKNTLVSQLRKELNIPVEVLAFPRYEDSIHAQLAQEALYGRMGDLTSSA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A A +FA R + + A +L+ DR++ S+ AY R +D + ++ Sbjct: 61 YAMATLFALDRHG-AKQQLEEASTSSNLLILDRYVASNAAYSAARLGDD-AVMDWVFDLE 118 Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + PD I L V I +R +R + S D +E+ Sbjct: 119 FGRLGLPKPDLQIYLATEVGIAAQRASSREAQDASREKDQYEKDG 163 >gi|296393761|ref|YP_003658645.1| thymidylate kinase [Segniliparus rotundus DSM 44985] gi|296180908|gb|ADG97814.1| thymidylate kinase [Segniliparus rotundus DSM 44985] Length = 205 Score = 92.4 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 16/211 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ G++G+GK+T IS L R + G +E R L ++ Sbjct: 2 KFVCVTGVDGSGKSTQISALARAFAEQGRAAGRVSIWDGLS-SERMRGALAFRSREDV-Y 59 Query: 65 EAEAIVFAAARLD---HVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ AAR H V + G LL D + YA + + + ++ Sbjct: 60 RYLGMLTPAARAYFLFHALQVSMDLAVAGVWDVLLLDGYWYKYYATEVAHGADR----EA 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ +++ PD T L + + R R ES D R+ + + + + Sbjct: 116 VRAMALGFARPDRTFYLTVDPAVATARKACRSDY-ESGYGDA--RRFLDFQRRSQTLLDA 172 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +AR R +D + + I + + Sbjct: 173 LAREH--RWTALDGRSEPEQITRTIFGELQK 201 >gi|302506264|ref|XP_003015089.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371] gi|291178660|gb|EFE34449.1| hypothetical protein ARB_06849 [Arthroderma benhamiae CBS 112371] Length = 177 Score = 92.4 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 13/158 (8%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G + A ++F+A R + IR + G ++ DR+ S Y +++ + L Sbjct: 8 GEIQLDDHAVHLLFSANRWEAAAQ-IRQDIESGITVIVDRYSYSGAVYSAAKENKELQ-L 65 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D V PD L++ ++ R + +E + + +K ++F Sbjct: 66 DWAWRPEVGLPRPDIWFFLNISIEAAAAR--------GGYGTERYE--TINLQKKVGKLF 115 Query: 178 LDIARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 L + + + +VD+ ++ I V + + K Sbjct: 116 LSLTELKGNEDMRVVDAGRGIDEISRQIREEVLQTMAK 153 >gi|255513966|gb|EET90230.1| Thymidylate kinase-like protein [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 240 Score = 92.4 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 90/231 (38%), Gaps = 32/231 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKR---------FLQRKNYDVHVTREPGGTPAAEAARH 52 ISFEG+ AGK+ + +L+R K +E P + Sbjct: 6 KKSFLISFEGVGAAGKSLQVDMLRRDPDMQKCMSMKIAKGVSRQSMQE-SLWPFRDRETE 64 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQG 107 L + + + + F AA ++ ++ L K+++ DR++D++ + Sbjct: 65 RLWVTVLPKVHPGTDMLAFIAAMNENCLT-MKDELASDQDGKLKVIIFDRYIDTALTHAV 123 Query: 108 ERDSSQHLFLD--SLQEISVQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 R + D +++ + PD TI++D P+++ R R + S Sbjct: 124 ARAALAGEHEDGPAIKSLFGTFFALKEHIEWPDLTIVIDTPIEVAEGRAMKRENHGYSET 183 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +RK + + + +A +PDR H +D S + + + I +++ Sbjct: 184 ----DRKG---FKTISEAYRKLASYEPDRVHFIDGRKSPEEILSEIKDLIR 227 >gi|167948232|ref|ZP_02535306.1| thymidylate kinase [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 78 Score = 92.4 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 6/80 (7%) Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 +LDLPV++GL R R + D FE + ++ RQ +L IA +QP+R ++D++ Sbjct: 2 LLDLPVEVGLARAGQR------SAPDRFESEQQHFFQRVRQGYLQIAADQPERVRLIDAS 55 Query: 195 HSFQSVATNILNIVWELVQK 214 V I + +Q+ Sbjct: 56 LPLAQVQQQISRELERFIQR 75 >gi|47212537|emb|CAF90553.1| unnamed protein product [Tetraodon nigroviridis] Length = 166 Score = 92.4 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 2/97 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L + LQ + + R P T A L + Sbjct: 4 KRGALIVLEGVDKAGKTTQCKKLVQALQERGQPAEMMRFPDRTTAIGQLISAYLENKSE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + ++FAA R + V +I+ L +G L+ DR+ Sbjct: 63 LTDQTVHLLFAANRWEMVP-LIKKKLQQGTTLVVDRY 98 >gi|147920304|ref|YP_685925.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I] gi|110621321|emb|CAJ36599.1| putative thymidylate kinase [uncultured methanogenic archaeon RC-I] Length = 185 Score = 92.0 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 28/205 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVDEFG 63 FI +G++G+GK T LLK +L + + + P ++ L+S G + Sbjct: 2 RFIVIDGLDGSGKDTQARLLKEYLAKSGNHIVIRAHPAQDNCLGRISKKALMSHG--QLM 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + V I ++ R++ +S AY + + I Sbjct: 60 RMVATLFYGFD----VIRSILLYCKGDNTVIFVRYIMAS-AY------LPRPIIKPVYAI 108 Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V+P D LD+ + L+RV+ R E + + EK R L I Sbjct: 109 VSR-VLPTSDEMFFLDVAPEEALRRVKARGEAEEMF-------ETLPHMEKVRGRALLIT 160 Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206 + ++D + V IL+ Sbjct: 161 KG----WKVIDGNGPPEQVFQRILD 181 >gi|255513756|gb|EET90021.1| thymidylate kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 215 Score = 91.6 bits (227), Expect = 6e-17, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 21/223 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG+ GAGKT S L L N + T PG E + + + Sbjct: 3 FIVVEGVNGAGKTVASSKLAEAL--GNAQIVKTPMPG---FLEELKEYFVRNQENIVARV 57 Query: 66 AEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYA----YQGERDSS--QHLFL 117 F A H ++IR L + ++ DR+ S+ A Y + S + + Sbjct: 58 T----FFDAATKHTCDLIRDMLCRDPNRFVIADRYWYSTMASHLAYDRVFNGSKSRDEII 113 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA--CLDYFERKDVMIHEKRRQ 175 + + + PD I++D+ + +R+ R R+ A + ER V E+ + Sbjct: 114 EIMNISKKYFIRPDLVILIDVDPEERRRRIALRKDGRDDAWHTENADERLFVAFKEEYEK 173 Query: 176 IFLDIARNQPDRCHIVDSAHS-FQSVATNILNIVWELVQKRVS 217 +F D+ R + V++ + A I ++++ + Sbjct: 174 VFDDL-RKDGTKILKVNNTRTEIDQTAEIIRKATGIMLKRNTA 215 >gi|94970851|ref|YP_592899.1| thymidylate kinase-like [Candidatus Koribacter versatilis Ellin345] gi|94552901|gb|ABF42825.1| Thymidylate kinase-like protein [Candidatus Koribacter versatilis Ellin345] Length = 228 Score = 91.6 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 75/227 (33%), Gaps = 40/227 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFGA 64 ++F GI+ GK+T I LL L+ + V G TP + + +L + Sbjct: 3 LLTFSGIDCCGKSTQIELLMEQLKSRGNAVSYMWLRLGYTPGFQGLKSLLRRVAGKKAAP 62 Query: 65 -----------------EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 + V R I++CDR+L S Sbjct: 63 AGNSPQRERFMKQGWKRRLWLYLAIGDMFWQTAVVTRWKRSADIIVICDRYLRDS----- 117 Query: 108 ERDSSQHLFLDSLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 E D + + D++ +M PD +++DL + L+R + + Sbjct: 118 EFDLAMNFPEDTVTRWWSWRLMSALAARPDVALLMDLSFEESLRRSLAKSEPFPDSEDRR 177 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ER ++ R + H++D+ + I+ +V Sbjct: 178 RERAEM-YRNSVRDG----------QWHVIDATRDIADIHGEIMGLV 213 >gi|284175898|ref|ZP_06389867.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2] gi|261602757|gb|ACX92360.1| thymidylate kinase related protein [Sulfolobus solfataricus 98/2] Length = 205 Score = 90.5 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 93/219 (42%), Gaps = 28/219 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60 + I+FEGIEG+GKT+H+ K++L+++ Y V + G A+ R+++ Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + + D +EN ++P++ G I L D + + ++ G + ++D + Sbjct: 55 -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDV 112 Query: 121 QEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEK 172 + P ++ ++ P +I + ++ R L D FE + + Sbjct: 113 LSM---LPKPSISLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINR 168 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ + I+ + I+ + F V I+ + + Sbjct: 169 FQEALMSISSREN----IIYTDKEFDEVQKEIVRRIDNI 203 >gi|215275164|sp|P0C8G2|KTHY_ASFWA RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 239 Score = 90.5 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 76/207 (36%), Gaps = 27/207 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G+ I+ EGI G GK+T LK+ L+ +Y+ R P T + VL + E Sbjct: 2 RGILIAIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVL--NKMIE 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E +F + V I L I++ DR++ S AY + +++ Sbjct: 60 MSSEQLHKLFTKHCSEFVAE-IAALLKLNFIVIVDRYIWSGLAYAQA----DGITIET-- 112 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180 PD T L + + L FE K+ E F I Sbjct: 113 ---KNTFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157 Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206 + P +R + + + + + T IL Sbjct: 158 MNDVPKNRLCTIPATLNKEIIHTMILT 184 >gi|215275161|sp|P0C8F9|KTHY_ASFK5 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 235 Score = 90.1 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 85/217 (39%), Gaps = 25/217 (11%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G+ I+ EGI G K+T LK L+ K YDV P T + VL + + Sbjct: 2 RGILIAIEGINGVEKSTQAIRLKNALENKRYDVIYLHFPSPNTDTGKLILDVL--NKIVK 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E +F R + I L I++ DR++ S AY + +D+ Sbjct: 60 MPSEQLHELFTKHRCEFTAE-IAALLKLNYIVIVDRYIWSGLAYAQA----DRIMIDTKN 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD T L + L N L + E+++++ + F++I Sbjct: 115 TFN-----PDYTFFL--SPNKSL----NEKPLHLQRLYETEEKQEIIFTQ-----FINII 158 Query: 182 RNQP-DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 P ++ + + + + + I + ++ +K ++ Sbjct: 159 NEVPKNKFCAIPANLNKEIIDKIIFSKTIKVFEKNLN 195 >gi|37524928|ref|NP_928272.1| hypothetical protein plu0936 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36784354|emb|CAE13231.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 178 Score = 90.1 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 14/174 (8%) Query: 49 AARHVLLSCGVD----EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 R +L + E G ++ A+ +I+P L++GKI++CD + A Sbjct: 12 KIRDLLWDYDISAPLGELGDRHWILLIASWFAVLDSLIIQPCLLQGKIIICDSWYYKYLA 71 Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 + + S I+ PD I LD+P I KR + ES L+ E+ Sbjct: 72 RFLLKSTELAKLSKSALSINT---KPDMVIYLDVPPSIAEKR-KEILKPSESGKLEINEK 127 Query: 165 KD-VMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVW-ELVQKR 215 D + + + D I+D+ + +V +I++++ E++++R Sbjct: 128 YDFIEYQKHVLNQYQTF---YDDTWKIIDADTLTKDAVIKSIVDVIQLEILKRR 178 >gi|9628143|ref|NP_042729.1| thymidylate kinase [African swine fever virus] gi|1170718|sp|P42490|KTHY_ASFB7 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase gi|402550|emb|CAA79604.1| thymidylate kinase [African swine fever virus] gi|780405|gb|AAA65265.1| thymidylate kinase [African swine fever virus] gi|162849246|emb|CAN10134.1| Thymidylate kinase [African swine fever virus Benin 97/1] gi|162849418|emb|CAN10383.1| Thymidylate kinase [African swine fever virus OURT 88/3] gi|291289479|emb|CBH29136.1| BA71V-A240L [African swine fever virus E75] gi|1097424|prf||2113434AH thymidylate kinase Length = 240 Score = 89.7 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 74/207 (35%), Gaps = 27/207 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G+ I+ EGI G GK+T LK+ L+ +Y+ R P T VL + E Sbjct: 2 RGILITIEGINGVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGGLILQVL--NKMTE 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E +F + I L I++ D ++ S AY + +++ Sbjct: 60 MSSEQLHKLFTKHHSEFSAE-IAALLKLNFIVIVDHYIWSGLAYAQA----DGITIET-- 112 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180 PD T L + + L FE K+ E F I Sbjct: 113 ---KNIFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157 Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206 + P +R I+ + + + + T IL Sbjct: 158 MNDVPKNRLCIIPATLNKEIIHTMILT 184 >gi|114584339|ref|XP_001161682.1| PREDICTED: similar to Deoxythymidylate kinase (thymidylate kinase) isoform 2 [Pan troglodytes] Length = 169 Score = 89.3 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 64/223 (28%), Gaps = 62/223 (27%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + D S LD + Sbjct: 63 --------------------------------VEDHSNFS---------------LDWCK 75 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V PD + L L + KR + + +E E+ + F + Sbjct: 76 QPDVGLPKPDLVLFLQLQLADAAKR--------GAFGHERYENG--AFQERALRCFHQLM 125 Query: 182 RNQPDRCHIVDSAHSFQSVATNIL----NIVWELVQKRVSPLS 220 ++ +VD++ S ++V +I + + +K + L Sbjct: 126 KDTTLNWKMVDASKSIEAVHEDIRVLSEDAIRTATEKPLGELW 168 >gi|15898045|ref|NP_342650.1| thymidylate kinase related protein [Sulfolobus solfataricus P2] gi|13814386|gb|AAK41440.1| Thymidylate kinase related protein [Sulfolobus solfataricus P2] Length = 208 Score = 88.9 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 93/219 (42%), Gaps = 28/219 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLLSCGVD 60 L I+FEGIEG+GKT+H+ K++L+++ Y V + G A+ R+++ Sbjct: 4 LIIAFEGIEGSGKTSHLEATKKYLEKEGYGVVTFGLQMSKLIGDRIAQVKRNII------ 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + + D +EN ++P++ G I L D + + ++ G + ++D + Sbjct: 58 -FERRTLFLAYVTDLADQIENYVKPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDV 115 Query: 121 QEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEK 172 + P ++ ++ P +I + ++ R L D FE + + Sbjct: 116 LSM---LPKPSISLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINR 171 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ + I+ + I+ + F V I+ + + Sbjct: 172 FQEALMSISSREN----IIYTDKEFDEVQKEIVRRIDNI 206 >gi|118576712|ref|YP_876455.1| thymidylate kinase [Cenarchaeum symbiosum A] gi|118195233|gb|ABK78151.1| thymidylate kinase [Cenarchaeum symbiosum A] Length = 186 Score = 88.9 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 50/141 (35%), Gaps = 9/141 (6%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-TPAAEAARHVLLSCGVDEFGAE 65 I EG + AGK T LL L RK V P TP + + L G + Sbjct: 8 IVIEGCDQAGKQTQAGLLAGALNRKGRKARVFAFPDYTTPVGKMMKKQLEGRGFE---PR 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + AA R + IR A G + + DR+ S+ Y L L + Sbjct: 65 VFHCLAAANRWEKAGE-IRAASSGGSVAILDRYRQSNMVY----GVLNGLSRRWLAGLDA 119 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 D I+LD+ +R Sbjct: 120 GLPRADVVILLDIKQKEAFRR 140 >gi|198431808|ref|XP_002124573.1| PREDICTED: similar to thymidylate kinase family LPS-inducible member [Ciona intestinalis] Length = 420 Score = 88.5 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 73/215 (33%), Gaps = 35/215 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD-----VHVTREPGGTPAAEAARHVLLSCGVDE 61 I EG++ GK+T L + L V R+ + R + G Sbjct: 224 IVIEGLDATGKSTLTENLAKRLNGCARKSPQDCVLHLRK-TFDSHFQLLRRAYYAIGN-- 280 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF----- 116 A + + + ++CDRF S+ AY D Sbjct: 281 ----------YAFAAQVLHD------AQSGPVVCDRFWHSTAAYAIATDVKVGDETHLPP 324 Query: 117 -LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + PD I+L + ++ R++ R + + + E+ + ++ + Sbjct: 325 ARHWVYSWPPDLLKPDIVILLTISDELRRCRLEGRNTEKTDEEI-RMEK-SRLFRQRIAE 382 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++ + + P +D++ S + + + ++ + Sbjct: 383 VYKRM--DNPA-LVELDASGSAEELCNKAVELLSD 414 >gi|145596093|ref|YP_001160390.1| thymidylate kinase [Salinispora tropica CNB-440] gi|145305430|gb|ABP56012.1| thymidylate kinase [Salinispora tropica CNB-440] Length = 236 Score = 88.5 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 23/207 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI+G+GKTT L L R GG L +V Sbjct: 31 GIDGSGKTTQAHRLAVALTEVGLPATYHRNAGGRRFLGRVARRLGRPDAQRLLGSTGLLV 90 Query: 71 F-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 + R + + + G++ + DR+ YA + + L Sbjct: 91 AESVLRWLAIAAALLGHRLTGRVAVMDRYAACQYASIRAHGGHRWERMARLGYRV--FPQ 148 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEKRRQIFLDIARNQP 185 P T +L + +R++ R + ES D + + Sbjct: 149 PQVTFLLAVDPTEAYRRIERRGTDHESMRYLIAADR--------------AYRSLPEQ-- 192 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELV 212 +VD+ V+ I + + + Sbjct: 193 PTFVLVDADRPADEVSRQIREHLHDWL 219 >gi|222444683|ref|ZP_03607198.1| hypothetical protein METSMIALI_00296 [Methanobrevibacter smithii DSM 2375] gi|222434248|gb|EEE41413.1| hypothetical protein METSMIALI_00296 [Methanobrevibacter smithii DSM 2375] Length = 186 Score = 88.5 bits (219), Expect = 6e-16, Method: Composition-based stats. Identities = 43/213 (20%), Positives = 77/213 (36%), Gaps = 38/213 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63 FI +G++G+GK T + LL +++ +V V P ++ LL G Sbjct: 3 KFIVIDGLDGSGKDTQVKLLAEMYEKQGKNVVVRSHPSMDNKYGIKSKEALLKTGKINHL 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A R IR +L+ R++ S Y ++ + Sbjct: 63 KATVYFGLDAIRS------IRKYYNNDNIDVLIFSRYIMS-VVY-------LPNVINIII 108 Query: 122 EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V V+P D LD+ + LKR+ NR ++ + E + L+ Sbjct: 109 YKFVSFVLPTSDYMFFLDVSPEESLKRIDNR-------------SEETEMFENMEE--LE 153 Query: 180 IARNQPDR----CHIVDSAHSFQSVATNILNIV 208 AR + + +I+D+ +S V I + Sbjct: 154 KARIKSKKVTYDWNIIDADNSIAKVNNEIKEKL 186 >gi|255033412|gb|ACT99397.1| unknown [Lactuca sativa] gi|255033414|gb|ACT99398.1| unknown [Lactuca sativa] gi|255033416|gb|ACT99399.1| unknown [Lactuca sativa] gi|255033418|gb|ACT99400.1| unknown [Lactuca sativa] gi|255033424|gb|ACT99403.1| unknown [Lactuca sativa] gi|255033426|gb|ACT99404.1| unknown [Lactuca sativa] gi|255033428|gb|ACT99405.1| unknown [Lactuca sativa] gi|255033430|gb|ACT99406.1| unknown [Lactuca sativa] gi|255033434|gb|ACT99408.1| unknown [Lactuca sativa] gi|255033436|gb|ACT99409.1| unknown [Lactuca sativa] gi|255033440|gb|ACT99411.1| unknown [Lactuca sativa] gi|255033442|gb|ACT99412.1| unknown [Lactuca sativa] gi|255033444|gb|ACT99413.1| unknown [Lactuca sativa] gi|255033446|gb|ACT99414.1| unknown [Lactuca sativa] gi|255033454|gb|ACT99418.1| unknown [Lactuca sativa] gi|255033466|gb|ACT99424.1| unknown [Lactuca sativa] gi|255033468|gb|ACT99425.1| unknown [Lactuca sativa] gi|255033476|gb|ACT99429.1| unknown [Lactuca sativa] gi|255033482|gb|ACT99432.1| unknown [Lactuca sativa] gi|255033484|gb|ACT99433.1| unknown [Lactuca sativa] gi|255033492|gb|ACT99437.1| unknown [Lactuca serriola] gi|255033494|gb|ACT99438.1| unknown [Lactuca sativa] gi|255033500|gb|ACT99441.1| unknown [Lactuca sativa] gi|255033502|gb|ACT99442.1| unknown [Lactuca sativa] gi|255033504|gb|ACT99443.1| unknown [Lactuca sativa] gi|255033508|gb|ACT99445.1| unknown [Lactuca sativa] gi|255033512|gb|ACT99447.1| unknown [Lactuca sativa] gi|255033514|gb|ACT99448.1| unknown [Lactuca sativa] gi|255033516|gb|ACT99449.1| unknown [Lactuca sativa] gi|255033518|gb|ACT99450.1| unknown [Lactuca sativa] gi|255033520|gb|ACT99451.1| unknown [Lactuca sativa] gi|255033522|gb|ACT99452.1| unknown [Lactuca sativa] gi|255033526|gb|ACT99454.1| unknown [Lactuca sativa] gi|255033532|gb|ACT99457.1| unknown [Lactuca serriola] gi|255033536|gb|ACT99459.1| unknown [Lactuca sativa] Length = 129 Score = 88.2 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GKT+ + L +L Y V R P T + L + + Sbjct: 16 RGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQS--Q 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 74 LDDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG----LDIEWCK 128 >gi|261350780|ref|ZP_05976197.1| dTMP kinase [Methanobrevibacter smithii DSM 2374] gi|288860535|gb|EFC92833.1| dTMP kinase [Methanobrevibacter smithii DSM 2374] Length = 186 Score = 88.2 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 38/213 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63 FI +G++GAGK T + LL +++ +V V P ++ LL G Sbjct: 3 KFIVIDGLDGAGKDTQVKLLAEMYEKQGKNVVVRSHPSMDNKYGIKSKEALLKTGKINHL 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A R IR +L+ R++ S Y ++ + Sbjct: 63 KATVYFGLDAIRS------IRKYYNNDNIDVLIFSRYIMS-VVY-------LPNVINIII 108 Query: 122 EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V V+P D LD+ + LKR+ NR ++ + E + L+ Sbjct: 109 YKFVSFVLPTSDYMFFLDVSPEESLKRIDNR-------------SEETEMFENMEE--LE 153 Query: 180 IARNQPDR----CHIVDSAHSFQSVATNILNIV 208 AR + + +I+D+ +S V I + Sbjct: 154 KARIKSKKVTYDWNIIDADNSIAKVNNEIKEKL 186 >gi|255033474|gb|ACT99428.1| unknown [Lactuca sativa] Length = 129 Score = 88.2 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 8/120 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GKT+ + L +L Y V R P T + L + + Sbjct: 16 RGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQS--Q 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 74 LDDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG----LDIEWCK 128 >gi|255033432|gb|ACT99407.1| unknown [Lactuca sativa] gi|255033438|gb|ACT99410.1| unknown [Lactuca sativa] gi|255033448|gb|ACT99415.1| unknown [Lactuca sativa] gi|255033450|gb|ACT99416.1| unknown [Lactuca sativa] gi|255033452|gb|ACT99417.1| unknown [Lactuca sativa] gi|255033456|gb|ACT99419.1| unknown [Lactuca sativa] gi|255033458|gb|ACT99420.1| unknown [Lactuca sativa] gi|255033460|gb|ACT99421.1| unknown [Lactuca sativa] gi|255033462|gb|ACT99422.1| unknown [Lactuca sativa] gi|255033464|gb|ACT99423.1| unknown [Lactuca sativa] gi|255033480|gb|ACT99431.1| unknown [Lactuca sativa] gi|255033486|gb|ACT99434.1| unknown [Lactuca sativa] gi|255033488|gb|ACT99435.1| unknown [Lactuca sativa] gi|255033496|gb|ACT99439.1| unknown [Lactuca sativa] gi|255033534|gb|ACT99458.1| unknown [Lactuca sativa] gi|255033538|gb|ACT99460.1| unknown [Lactuca sativa] Length = 129 Score = 87.8 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GKT+ + L +L Y V R P T + L + + Sbjct: 16 RGALIVLEGLDRSGKTSQSARLLSYLNNLGYPVESWRFPDRDTAVGKMISSYLTNQS--Q 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 ++F+A R + +++ L G L+ DR+ S A+ + Sbjct: 74 LDDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG 121 >gi|327261283|ref|XP_003215460.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Anolis carolinensis] Length = 300 Score = 87.8 bits (217), Expect = 9e-16, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 26/214 (12%) Query: 3 SGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 G F I EG++ GKTT S +K L V + P + Sbjct: 98 KGNFPVIVIEGLDATGKTTVTSAVKDTLNA----VLLRTPPPCVSQWRK----VFDDKPT 149 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--- 117 A+ + + ++ ++ DR+ S+ AY ++S + Sbjct: 150 LIRRAFYALTNYIVASEIAKESVKSP------VIVDRYWHSTAAYAIATETSGKVEDLPP 203 Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + PD ++L L D +R+ R + + E ++ ++ + Sbjct: 204 PHHPVYCWPKDLLRPDIVLLLTLSSDERSRRLLGRGVEKTREEAE-LE-ENRYFRQRVEE 261 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + P C VD++ S + V +L+++ Sbjct: 262 AYRRM--ENPG-CQPVDASPSREKVVKAVLHLIE 292 >gi|300789814|ref|YP_003770105.1| dTMP kinase [Amycolatopsis mediterranei U32] gi|299799328|gb|ADJ49703.1| dTMP kinase [Amycolatopsis mediterranei U32] Length = 217 Score = 87.8 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 15/206 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVD- 60 G + EG++GAGK T L L K V P G + A+ R L D Sbjct: 5 GRLVVIEGLDGAGKRTLTDGLTAALGAKGASVTSLAFPRYGESVHADLVREALHRGHGDL 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118 A+++A R + IR ++L DR++ S+ AY R + Sbjct: 65 ADSVYGMAMLYALDRSGAADR-IRELRDAHDVVLLDRYVASNAAYAAARLRQDAAGEVVK 123 Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + E+ V PD ++L + + +R + R D FE D + + Sbjct: 124 WVWELEVDRFGLPRPDAHLLLRVAPAVAAERAERRAETETGRERDAFE-TDDGLQRRCAA 182 Query: 176 IFLDIARN---QPDRCHIVDSAHSFQ 198 ++ ++A P H++D Sbjct: 183 VYDELAATGWLAP--WHVLDGVAGVD 206 >gi|70607739|ref|YP_256609.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639] gi|68568387|gb|AAY81316.1| thymidylate kinase-like protein [Sulfolobus acidocaldarius DSM 639] Length = 210 Score = 87.4 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 87/220 (39%), Gaps = 20/220 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I+ EGI +GKTTH+ L+ +L+ + Y V G +++ + S D Sbjct: 1 MEKGRIIAIEGIMSSGKTTHVQSLRDYLEDRGYVVTTI----GIQSSKLMADAIASVKRD 56 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F + + D EN+++P+L G I++ D ++ + A+ R + + Sbjct: 57 IVFQRRTLFLAYVTDLADQTENLVKPSLDSGFIVIADGYVLTLEAWALTRRLER----EW 112 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178 ++ + +I L P ++R+ R LD E D+ + E + Sbjct: 113 VEGVLSMLPKASLSISLISPPTEIMRRIIKR-----KGFLDPLSESVDLNVKEDTFLAYK 167 Query: 179 DIARNQPDRCH-----IVDSAHSFQSVATNILNIVWELVQ 213 + ++ + ++ V I +V E ++ Sbjct: 168 KYVKEFQSHLKSISPNVLVTKNNVNEVNREIERLVREELK 207 >gi|255033420|gb|ACT99401.1| unknown [Lactuca sativa] gi|255033422|gb|ACT99402.1| unknown [Lactuca sativa] gi|255033470|gb|ACT99426.1| unknown [Lactuca sativa] gi|255033472|gb|ACT99427.1| unknown [Lactuca sativa] gi|255033478|gb|ACT99430.1| unknown [Lactuca sativa] gi|255033490|gb|ACT99436.1| unknown [Lactuca sativa] gi|255033498|gb|ACT99440.1| unknown [Lactuca sativa] gi|255033506|gb|ACT99444.1| unknown [Lactuca sativa] gi|255033510|gb|ACT99446.1| unknown [Lactuca sativa] gi|255033524|gb|ACT99453.1| unknown [Lactuca sativa] gi|255033528|gb|ACT99455.1| unknown [Lactuca sativa] gi|255033530|gb|ACT99456.1| unknown [Lactuca sativa] Length = 129 Score = 87.4 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 6/119 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I EG++ +GKT+ + L +L Y V R P A L + Sbjct: 16 RGALIVLEGLDRSGKTSQSARLLSYLNNLGYRVESWRFPDRDTAVGKMISSYL-TNQSQL 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++F+A R + +++ L G L+ DR+ S A+ + L ++ + Sbjct: 75 DDHTIHLLFSANRWE-KRSLMEAKLKSGISLIVDRYSYSGVAFSSAKG----LDIEWCK 128 >gi|39938860|ref|NP_950626.1| thymidylate kinase [Onion yellows phytoplasma OY-M] gi|39721969|dbj|BAD04459.1| thymidylate kinase [Onion yellows phytoplasma OY-M] Length = 145 Score = 86.6 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 5/102 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I+ L+ L+ + + G + + R + L+ + Sbjct: 18 KLIVFEGLDGSGKTSLINSLQPHLKN---PYQLYQGLGSSSLGKEIRGLFLN--FQQVDY 72 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 + A +I L ++++ DR+L S+YAYQ Sbjct: 73 LTRFYLSLANMAQIQAELIVSQLKNNQLIILDRWLPSTYAYQ 114 >gi|227826764|ref|YP_002828543.1| thymidylate kinase related protein [Sulfolobus islandicus M.14.25] gi|229583934|ref|YP_002842435.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.27] gi|238618863|ref|YP_002913688.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4] gi|227458559|gb|ACP37245.1| thymidylate kinase related protein [Sulfolobus islandicus M.14.25] gi|228018983|gb|ACP54390.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.27] gi|238379932|gb|ACR41020.1| thymidylate kinase related protein [Sulfolobus islandicus M.16.4] gi|323476500|gb|ADX81738.1| thymidylate kinase [Sulfolobus islandicus HVE10/4] Length = 205 Score = 86.6 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGIEG+GKT+H+ K++L+++ Y V E V F Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQV---KRNIVFER 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + D +EN + P++ G I L D + + ++ G + ++D + I Sbjct: 58 RTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDVLSI- 115 Query: 125 VQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEKRRQI 176 P ++ ++ P +I + ++ R L D FE + + +++ Sbjct: 116 --LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINRFQEV 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + I+ + I+ + F V I+ + Sbjct: 173 LMSISSKEN----IIYTDKEFDEVQKEIVRRI 200 >gi|260909078|gb|ACX54176.1| chimeric thymidine kinase/thymidylate kinase [Shrimp white spot syndrome virus] Length = 262 Score = 86.6 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 5/128 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + EG + GK+T LL Y P + + L+ ++ Sbjct: 140 LVVLEGGDRCGKSTQAKLLLTNKNSPLYGGEYMCFPDRSSHTGKLINDYLTKKIE-LDDH 198 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A ++F+A R + V + I+ L +G ++ DR+ S + R ++ Sbjct: 199 AAHLLFSANRWE-VCSKIKQLLDDGIHVVMDRYYYSGIVFSLARGVD---TVEWCSASDE 254 Query: 126 QEVMPDCT 133 PD Sbjct: 255 GLPQPDLV 262 >gi|229583123|ref|YP_002841522.1| thymidylate kinase related protein [Sulfolobus islandicus Y.N.15.51] gi|228013839|gb|ACP49600.1| thymidylate kinase related protein [Sulfolobus islandicus Y.N.15.51] Length = 208 Score = 85.8 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 94/220 (42%), Gaps = 29/220 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REPGGTPAAEAARHVLLS 56 MN+ L I+FEGIEG+GKT+H+ K++L+++ Y V + G + R++L Sbjct: 1 MNT-LIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQVKRNIL-- 57 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 F + + D +EN + P++ G I L D + + ++ G + + Sbjct: 58 -----FERRTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEW 111 Query: 117 LDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVM 168 +D + I P ++ ++ P +I + ++ R L D FE + Sbjct: 112 IDDVLSI---LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-ID 167 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +++ + I+ + ++ + F V I+ + Sbjct: 168 YINRFQEVLMSISSKEN----MIYTDKEFDEVQKEIVRRI 203 >gi|215275163|sp|P0C8G1|KTHY_ASFP4 RecName: Full=Thymidylate kinase; AltName: Full=dTMP kinase Length = 239 Score = 85.5 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 76/207 (36%), Gaps = 27/207 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G+ I+ EG+ GK+T LK+ L+ +Y+ R P T + VL + E Sbjct: 2 RGILIAIEGVNRVGKSTQAMRLKKALECMDYNAVCIRFPNPDTTTGDLILQVL--NKMIE 59 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +E +F + V I L I++ DR++ S AY + +++ Sbjct: 60 MSSEQLHKLFTKHCSEFVAE-IAALLKLNFIVIVDRYIWSGLAYAQA----DGITIET-- 112 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIFLDI 180 PD T L + + L FE K+ E F I Sbjct: 113 ---KNIFKPDYTFFL----------SSKKPLNEKPLTLQRLFETKEK--QETIFTNFTII 157 Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILN 206 + P +R I+ + + + + T IL Sbjct: 158 MNDVPKNRLCIIPATLNKEIIHTMILT 184 >gi|209732338|gb|ACI67038.1| Thymidylate kinase [Salmo salar] gi|303659245|gb|ADM15955.1| Thymidylate kinase [Salmo salar] Length = 120 Score = 85.5 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 2/104 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT + L + LQ + + P T + L + Sbjct: 4 RRGALIVLEGVDKAGKTTQCNKLVQALQDSGQKAEMMKFPERTTKIGQLINSYLENKSN- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 ++F+A R + + +++ L +G L+ DR+ S A+ Sbjct: 63 LEDHTVHLLFSANRWELMP-LMKEKLEQGISLVVDRYAFSGVAF 105 >gi|163784586|ref|ZP_02179432.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159880147|gb|EDP73805.1| thymidylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 51 Score = 85.5 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 24/50 (48%), Positives = 31/50 (62%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52 G+FI+FEGIEGAGK+T L +L K + +TREPGGT + R Sbjct: 2 KGVFITFEGIEGAGKSTQAKKLYEYLISKGKNAVLTREPGGTKTGKKIRE 51 >gi|148642137|ref|YP_001272650.1| thymidylate kinase [Methanobrevibacter smithii ATCC 35061] gi|148551154|gb|ABQ86282.1| thymidylate kinase [Methanobrevibacter smithii ATCC 35061] Length = 186 Score = 85.1 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 42/215 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63 FI +G++G+GK T + LL +++ +V V P ++ LL G Sbjct: 3 KFIVIDGLDGSGKDTQVKLLAEMYEKQGKNVVVRSHPSMDNKYGIKSKEALLKTGKINHL 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A R IR +L+ R++ S Y ++ + Sbjct: 63 KATVYFGLDAIRS------IRKYYNNDNIDVLIFSRYIMS-VVY-------LPNVINIII 108 Query: 122 EISVQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 V V+P T LD+ + LKR+ NR ++ + E + Sbjct: 109 YKFVSFVLP--TSEYMFFLDVSPEESLKRIDNR-------------SEETEMFENMEE-- 151 Query: 178 LDIARNQPDR----CHIVDSAHSFQSVATNILNIV 208 L+ AR + + +I+D+ +S V I + Sbjct: 152 LEKARIKSKKVTYDWNIIDADNSIAKVNDEIKEKL 186 >gi|227829398|ref|YP_002831177.1| thymidylate kinase related protein [Sulfolobus islandicus L.S.2.15] gi|229578186|ref|YP_002836584.1| thymidylate kinase related protein [Sulfolobus islandicus Y.G.57.14] gi|284996769|ref|YP_003418536.1| thymidylate kinase related protein [Sulfolobus islandicus L.D.8.5] gi|227455845|gb|ACP34532.1| thymidylate kinase related protein [Sulfolobus islandicus L.S.2.15] gi|228008900|gb|ACP44662.1| thymidylate kinase related protein [Sulfolobus islandicus Y.G.57.14] gi|284444664|gb|ADB86166.1| thymidylate kinase related protein [Sulfolobus islandicus L.D.8.5] Length = 205 Score = 85.1 bits (210), Expect = 6e-15, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGIEG+GKT+H+ K++L+++ Y V E V F Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKQGYGVITFGLQKSKLLGERITQV---KRNIVFER 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + D +EN + P++ G I L D + + ++ G + ++D + I Sbjct: 58 RTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDVLSI- 115 Query: 125 VQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEKRRQI 176 P ++ ++ P +I + ++ R L D FE + + +++ Sbjct: 116 --LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINRFQEV 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + I+ + ++ + F V I+ + Sbjct: 173 LMSISSKEN----MIYTDKEFDEVQKEIVRRI 200 >gi|323473846|gb|ADX84452.1| thymidylate kinase related protein [Sulfolobus islandicus REY15A] Length = 205 Score = 84.7 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 86/212 (40%), Gaps = 20/212 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+FEGIEG+GKT+H+ K++L+++ Y + E V F Sbjct: 1 MIIAFEGIEGSGKTSHLEATKKYLEKQGYGIITFGLQKSKLLGERITQV---KRNIVFER 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + D +EN + P++ G I L D + + ++ G + ++D + I Sbjct: 58 RTLFLAYVTDLADQIENYVNPSIDSGFIALADGYTLTLTSW-GLTRGLEKEWIDDVLSI- 115 Query: 125 VQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHEKRRQI 176 P ++ ++ P +I + ++ R L D FE + + +++ Sbjct: 116 --LPKPSVSLPLISTPDEIVRRIIKKRGYLDPLETGIDICIKEDTFEAY-IDYINRFQEV 172 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + I+ + I+ + F V I+ + Sbjct: 173 LMSISSKEN----IIYTDKEFDEVQKEIVRRI 200 >gi|315426522|dbj|BAJ48153.1| dTMP kinase [Candidatus Caldiarchaeum subterraneum] Length = 218 Score = 84.7 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 83/223 (37%), Gaps = 27/223 (12%) Query: 10 EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 EG++G+GKTT + + L K + V + P +P + E + Sbjct: 5 EGVDGSGKTTLMKAVVNKLAEKGHGVETYKTPSSSPTG---IFAVQHGNRPETDPLTRML 61 Query: 70 VFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAY----------QGERDSSQHLFL 117 +F A D VI+ + E K ++ DR+ S Y +G D F+ Sbjct: 62 LFLANTSDDSA-VIKKIIEEKKPDYMMIDRYSLCSVVYGFALWSRRFGRGVEDMLFTRFI 120 Query: 118 DSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE---KR 173 + ++ + PD T+++++ + + R + +++ D D + + K Sbjct: 121 EIVETLGENVFAKPDLTVVVEVDEET-----RRRRTAQKTGTSDRVLEVDEELQKLVSKY 175 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 ++L + + + +A + + L + R+ Sbjct: 176 YDVYLSW--RPGETVKVFNGDSMLDELANTLAEKLVYLREARL 216 >gi|254495912|ref|ZP_05108821.1| putative thymidylate kinase [Legionella drancourtii LLAP12] gi|254354894|gb|EET13520.1| putative thymidylate kinase [Legionella drancourtii LLAP12] Length = 203 Score = 84.7 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 81/217 (37%), Gaps = 25/217 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHV 53 M + I G +G+GKTT + L++ L+ + Y V + + P + Sbjct: 1 MKT---IVIAGADGSGKTTLCNALEKSLRLQGYKVEVATIWDILDKNLFIAPVNKQGIAK 57 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 L A + + + A+ HV P +IL+ + + Y + Sbjct: 58 YLQ--TLSCHARSLFLFHSMAQAIHVAQKENP-----QILVINSYWYKYYI-SEILHGAL 109 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +D++ +I P+ LD+ LKR + D E+ + +K Sbjct: 110 RDDVDAMVKI---FPKPNLVYYLDISPVTSLKRKEVISGYESGYERDK-EKGFLTFQKKA 165 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +Q + I QP+ +D++ S + +A + + + Sbjct: 166 QQEWDKI--KQPN-WKNLDTSLSIEDLARTVFEDIQK 199 >gi|39938558|ref|NP_950324.1| hypothetical protein PAM_072 [Onion yellows phytoplasma OY-M] gi|39721667|dbj|BAD04157.1| hypothetical protein [Onion yellows phytoplasma OY-M] Length = 129 Score = 84.3 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 5/119 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FE ++G+GKT+ I L+ L+ + G + + R + L+ + Sbjct: 2 KLIVFEVLDGSGKTSLIHALQPQLKA---PFQTYQGLGSSSLGKEIRDLFLN--FSQVDY 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A + +I P L ++++ DR+L S+YAYQ S + L L++I Sbjct: 57 LTRFYLSLANMTQNQVELIVPQLKNNQLIILDRWLPSTYAYQLFPFSKEKKQLLPLKKI 115 >gi|157116912|ref|XP_001652905.1| Thymidylate kinase, putative [Aedes aegypti] gi|108883433|gb|EAT47658.1| Thymidylate kinase, putative [Aedes aegypti] Length = 181 Score = 84.3 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 18/184 (9%) Query: 30 RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89 R + P + A + L+ D F EA ++F R + +N + L Sbjct: 5 RAGHKAKFMNFPDRSTQFGALINSYLTSK-DNFTDEAIHLLFTLNRWE-AKNEMERLLRS 62 Query: 90 GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQN 149 G L+ DR+ S A+ + L +D + PD ++L L + KR Sbjct: 63 GVTLIVDRYSYSGVAFSAAKG----LNMDWCKAPETGLPKPDLVLLLTLTAEAMAKR--- 115 Query: 150 RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +E + +K + F + +VD+ +++ + +V Sbjct: 116 -----GGFGQERYE--VPELQKKVMEKFHTL--KDDSYWKVVDADKKEDALSLELCEMVL 166 Query: 210 ELVQ 213 + ++ Sbjct: 167 DSME 170 >gi|315504847|ref|YP_004083734.1| thymidylate kinase (dtmp kinase) [Micromonospora sp. L5] gi|315411466|gb|ADU09583.1| putative thymidylate kinase (dTMP kinase) [Micromonospora sp. L5] Length = 220 Score = 83.9 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 63/200 (31%), Gaps = 16/200 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGV 59 M + I+ G++G+GKTT L L+ + GG P R + + G+ Sbjct: 1 MGRPVMIALIGVDGSGKTTQARALAARLREQGVRARYFENAGGRPLWNRLARALGRADGM 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 FG + A R + + A + G++ + DR+ R + + Sbjct: 61 ALFGRTVYPALEATVRAAAMARTVAVARLTGQVAVLDRWTWCQDVIMAARGDRGRRAVRA 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + P L + +RV R + +++ + Sbjct: 121 VYAV---FPRPAVVCFLATSPGVAQRRVAARG----------IDTEELAHLRALDGAYRA 167 Query: 180 IARNQPDRCHIVDSAHSFQS 199 + + +D + Sbjct: 168 L--PEFGSFVTLDGDGTPDE 185 >gi|302558329|ref|ZP_07310671.1| thymidylate kinase [Streptomyces griseoflavus Tu4000] gi|302475947|gb|EFL39040.1| thymidylate kinase [Streptomyces griseoflavus Tu4000] Length = 212 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 69/218 (31%), Gaps = 39/218 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EGI G GK+T +L + L+ + P A Sbjct: 20 FIILEGISGIGKSTLARILTQRLEAGSLHTVPDFYMPWAPV---------------MNAN 64 Query: 66 AEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ F + + H ++I L G ++ DR++ S AY + L Sbjct: 65 TRALPQFAFYLSGVLHASDIICGHLEHGP-VVSDRYVSSVLAYHSAVHELDMAQVAEL-- 121 Query: 123 ISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESAC-----LDYFERKDVMIHEKRR 174 ++ PD T L R+ + + E + R Sbjct: 122 LAPFRPYLCAPDHTFYLRCTDRTLRTRMAGKKDYNQDDHDMITVPGRLE--------RLR 173 Query: 175 QIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWEL 211 F ++A P I+++ + +A I + EL Sbjct: 174 SNFDEVAAGDPTG-VIIETDDRTPGELADAITAHLTEL 210 >gi|70951454|ref|XP_744966.1| thymidylate kinase [Plasmodium chabaudi chabaudi] gi|56525131|emb|CAH77574.1| thymidylate kinase, putative [Plasmodium chabaudi chabaudi] Length = 129 Score = 83.9 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 15/128 (11%) Query: 81 NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPV 140 + I+ L+ G ++CDR+ S AY + + PD L+LP Sbjct: 1 DEIKNLLINGTWVVCDRYAYSGVAYSSGALKLPK---EWCMNPDKGLIKPDAVCYLNLPP 57 Query: 141 DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + R S + FE + ++ + + + D +D+ S Q + Sbjct: 58 NHAQNR-----SEYGKEIYEKFE-----VQKRIYEAYEHFSNE--DYWINIDATKSIQEI 105 Query: 201 ATNILNIV 208 I+ + Sbjct: 106 HNTIVEEI 113 >gi|296138803|ref|YP_003646046.1| thymidylate kinase [Tsukamurella paurometabola DSM 20162] gi|296026937|gb|ADG77707.1| thymidylate kinase [Tsukamurella paurometabola DSM 20162] Length = 213 Score = 83.5 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 52/214 (24%), Positives = 87/214 (40%), Gaps = 15/214 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61 G ++ EG++GAGK T + + L + V P G + A+ A L D Sbjct: 2 GTLVAVEGLDGAGKNTLTRAVTQRLTDRGLTVAALAFPRYGRSIHADLAAEALHGGHGDA 61 Query: 62 F-GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-----L 115 ++FA R + IR L ++L DR+ SS AY R Sbjct: 62 TASVYGMGLLFALDRRGAADE-IRGLLAGHDVVLLDRYAASSAAYSAARLGEDAHGAVAT 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ L+ +PD + LD+PV + R + R + + D +E+ D + + Sbjct: 121 WVRELEFERFGVPVPDLQVYLDVPVAVAAARAKGREAHDATRARDVYEK-DAGLQARTGA 179 Query: 176 IFLDIARNQ---PDRCHIVDSAHSFQSVATNILN 206 ++ +A Q P R H VD + + +A I N Sbjct: 180 VYAGLAAAQWVSPWRVHGVD--DAPELLADAIAN 211 >gi|126660079|ref|ZP_01731200.1| hypothetical protein CY0110_12342 [Cyanothece sp. CCY0110] gi|126618676|gb|EAZ89424.1| hypothetical protein CY0110_12342 [Cyanothece sp. CCY0110] Length = 126 Score = 83.5 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 55/132 (41%), Gaps = 12/132 (9%) Query: 79 VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL 138 V+ V + + ++ R+ SS AY +S+ + + E++ + PD I LD+ Sbjct: 4 VDGVYKLIQQDHCHVIATRYYFSSLAY----NSNNQEEFNFVYELNQRFPNPDIVIYLDI 59 Query: 139 PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198 VDI L R++N + ++ ++ + I ++ +D +S Sbjct: 60 SVDIALSRLENAVYKEVYETKEKL--------QQVKKNYDKIFQSYEGDILTIDGNNSIG 111 Query: 199 SVATNILNIVWE 210 + I++ + + Sbjct: 112 KIQQEIISYLEK 123 >gi|331698936|ref|YP_004335175.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] gi|326953625|gb|AEA27322.1| Thymidylate kinase [Pseudonocardia dioxanivorans CB1190] Length = 214 Score = 83.5 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 9/173 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC-GVD 60 G + EG++GAGK T L L P AE AR L G Sbjct: 2 GRLVVIEGLDGAGKRTLTDGLCAALDAAGASTARLAFPRYDDDVHAELARDALYGRLGDL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118 A++FA R V V+ L +L+ DR++ S+ AY R + Sbjct: 62 SDSVHGMAVLFALDRRAAVP-VLADLLAAHDVLIVDRYVASNAAYNAARLHQDASGEVVA 120 Query: 119 SLQEISV---QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E+ + +PD ++L +P + R R D +E D + Sbjct: 121 WVRELEIERFGLPVPDLQLLLQVPQSVAAARAAGRARTEAGRDRDAYESDDAL 173 >gi|329940407|ref|ZP_08289688.1| hypothetical protein SGM_5180 [Streptomyces griseoaurantiacus M045] gi|329300468|gb|EGG44365.1| hypothetical protein SGM_5180 [Streptomyces griseoaurantiacus M045] Length = 230 Score = 83.2 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 70/213 (32%), Gaps = 22/213 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARHVL- 54 G I+F G +GAGK+T + L + L + + R+P + + ++ Sbjct: 12 GKLITFVGGDGAGKSTLAARLHQALNDAGHTAVLIGKHSTDVRRDPELSAYLDRLNELVY 71 Query: 55 -LSCGVDEFGAEAEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 GV + + ++ A+ + VI+PAL G ++ D A Sbjct: 72 RRDAGVAQACGDHYWLLALASWYTLQDRLVIQPALAAGTHVILDNAHHKILARYAVNPEV 131 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +++ PD L++ L R + SL + Sbjct: 132 SPRL---CEQVFAHLTKPDLVFFLNIGAREALVRKGSFTSLEAGHAG-----GGDEDFIR 183 Query: 173 RRQIFLDIARNQPDR--CHIVD-SAHSFQSVAT 202 + LD R Q +R +D + V Sbjct: 184 YQDTVLDQMREQAERGAWLTLDVAQLDRDQVFK 216 >gi|302868681|ref|YP_003837318.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] gi|302571540|gb|ADL47742.1| thymidylate kinase [Micromonospora aurantiaca ATCC 27029] Length = 220 Score = 82.8 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 60/200 (30%), Gaps = 16/200 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59 M + I+ G++G+GKTT L L+ + GG P L + G Sbjct: 1 MGRPVMIALIGVDGSGKTTQARALAARLREQGIRARYFENAGGRPLWNRLAQALGRADGT 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 FG + A R + + A + G++ + DR+ R + + Sbjct: 61 ALFGRTVYPALEATVRAAAMARTVAVARLTGRVAVLDRWTWCQDVIMAARGDRGRRAVRA 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + P L + RV R + +++ + Sbjct: 121 VYAV---FPRPAVVCFLATSPGVAQWRVAARG----------IDTEELAHLRALDAAYRA 167 Query: 180 IARNQPDRCHIVDSAHSFQS 199 + + +D + Sbjct: 168 L--PEFGSFVTLDGDGTPDE 185 >gi|226471244|emb|CAX70703.1| Thymidylate kinase [Schistosoma japonicum] Length = 132 Score = 82.8 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 5/111 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPG-GTPAAEAARHVLLSCG 58 + GLF+ FEG+E GK T LL+ L + + P TP + G Sbjct: 5 IKRGLFVVFEGVEKCGKNTQSELLQDALTQITGKQALLIHFPDKSTPVGKLLAEYF--DG 62 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 + A ++ A R + + I AL G ++ DR+ S AY + Sbjct: 63 KLQLELHASHLLHIANRWERQDE-ISNALKAGISVVVDRYSYSGIAYTAAK 112 >gi|254827258|ref|ZP_05231945.1| thymidylate kinase [Listeria monocytogenes FSL N3-165] gi|258599640|gb|EEW12965.1| thymidylate kinase [Listeria monocytogenes FSL N3-165] Length = 77 Score = 82.4 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +FI+ EG +G+GKTT +LL + + D TREPGG+P +E R+++L G + Sbjct: 1 MKA-IFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNE 59 Query: 61 EFGAE 65 E ++ Sbjct: 60 EMDSK 64 >gi|296394614|ref|YP_003659498.1| thymidylate kinase [Segniliparus rotundus DSM 44985] gi|296181761|gb|ADG98667.1| thymidylate kinase [Segniliparus rotundus DSM 44985] Length = 209 Score = 82.4 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 75/187 (40%), Gaps = 11/187 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS--CGVD 60 + I+ EG++GAGK T L + + V P G + A+ A L G Sbjct: 1 MLITVEGLDGAGKRTITDALSAVWRAQGRSVAQMAFPRYGQSAHADLAAESLRGAFGGRI 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLD 118 A ++FA R + + L I+LCDR+ S+ AY R F Sbjct: 61 AADPLAMGLLFALDRHEAKGEL-AALLGSHDIVLCDRYAASNAAYGAARLGEDAAGPFAS 119 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + E + PDC ++L P + +R ++R + D +ER D + E+ Sbjct: 120 WVFEFEFGRLGLPEPDCQLLLATPAGLAAERARSRAAADPGRARDAYER-DGELQERVGA 178 Query: 176 IFLDIAR 182 ++ +A Sbjct: 179 VYGGLAA 185 >gi|91792525|ref|YP_562176.1| thymidylate kinase-like protein [Shewanella denitrificans OS217] gi|91714527|gb|ABE54453.1| Thymidylate kinase-like protein [Shewanella denitrificans OS217] Length = 217 Score = 82.4 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 31/217 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHV------LLS 56 + I+ G +G GK+T LL + + T +R + + Sbjct: 1 MLIALTGADGVGKSTVSKLLLQEVAHHGKRFKTLDRWNMLDTSLFPQSRFISAPLPEVKQ 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 C + G +F + V PA I D + A + + Sbjct: 61 CVAEMEGPSR--FLFILWTIYGVLESYDPA--SPHITFIDSYWMKHAAAEVAYGLPEKFV 116 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVMI- 169 L+ ++ + PD TI+LDL ++ +R + A L+Y+E R Sbjct: 117 LNIIELL----PKPDLTILLDLSPELAYERKEK----SGFADLNYYECGMDKTRSYNSFI 168 Query: 170 --HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 K R L A ++ H +D++ + VA + Sbjct: 169 QHQSKIRSQLLCWA--DSNKWHKIDTSRPVEEVAAAV 203 >gi|311070662|ref|YP_003975585.1| deoxyguanosine kinase [Bacillus atrophaeus 1942] gi|310871179|gb|ADP34654.1| deoxyguanosine kinase [Bacillus atrophaeus 1942] Length = 207 Score = 82.4 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 81/222 (36%), Gaps = 24/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG GAGKTT ++L + L V P + + Sbjct: 1 MNKAPFIAIEGPIGAGKTTLATMLSQELGFPIIKEIVEDNPYLDKFYDNI---------E 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS 119 E+ + E + F R +E+ R L EG+ ++ D + + + QHL Sbjct: 52 EWSFQLE-MFFLCHRYKQLEDTNRKFLKEGQPVIADYHIYKNVIFAERTLHDQHLDKYRQ 110 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 + + ++ PD I + + L+R++ R E Y E+ +Q Sbjct: 111 IYHLLTDDLPKPDLIIYIRASLTTLLERIEKRGRPFEKKIEQSYLEQLIADYEAAIKQ-- 168 Query: 178 LDIARNQPD-RCHIVDSAHSFQSVATN-----ILNIVWELVQ 213 + P+ + +D S V I V EL++ Sbjct: 169 --LQEANPELKVLTIDGD-SEDFVLNERDFKGIAAQVKELIK 207 >gi|213029631|ref|ZP_03344078.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 89 Score = 81.6 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRP 85 +AE ++ AAR+ V NV P Sbjct: 65 ITDKAEVLIVLAARVQLVRNVTNP 88 >gi|256380301|ref|YP_003103961.1| thymidylate kinase [Actinosynnema mirum DSM 43827] gi|255924604|gb|ACU40115.1| thymidylate kinase [Actinosynnema mirum DSM 43827] Length = 210 Score = 81.6 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 36/222 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVL---LSCGVDEFG 63 EG++GAGK T L L + V P G A+ R L L VDE Sbjct: 2 VEGLDGAGKRTLTGALTAELVSRGARVTTGAFPRYGRDVHADLVRAALYGELGPLVDEV- 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE--RDSSQHLFLDSLQ 121 A+++A R E + R L ++L DR++ S AY R F+ ++ Sbjct: 61 -RGMALLYALDRRGAREEL-RVGLASHDVVLLDRYIASGAAYGAARLRQGPDGEFVAWVR 118 Query: 122 EISVQEV-----------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + V +P + +R +R + D +E D + Sbjct: 119 ALEVDRFELPLPDLQLLLR--------VPAAVAEQRAAHREATEADRGRDVYES-DGGLQ 169 Query: 171 EKRRQIFLDIARN---QPDRCHIVDSAHSFQSV-ATNILNIV 208 + +++ +A P VD + + I +++ Sbjct: 170 RRCGEVYDGLAATSWLSP--WRAVDGSVPAAELGVAAIADLL 209 >gi|312200489|ref|YP_004020550.1| thymidylate kinase [Frankia sp. EuI1c] gi|311231825|gb|ADP84680.1| thymidylate kinase [Frankia sp. EuI1c] Length = 228 Score = 80.8 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 72/230 (31%), Gaps = 46/230 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69 G++GAGK+T L L GG P +A H L G G Sbjct: 4 GVDGAGKSTAARRLANELTASGTPARYFENAGGRPIIDALAHRLGRRDGRHLLGNRGYLG 63 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-----------LFLD 118 V R + + + + ++ + DR+ YA R S+ +D Sbjct: 64 VEVTIRWLAITRAVTLSTLTRRVAVMDRYTYCQYAIMRARGDSRPTRRPTDDQDLWEAID 123 Query: 119 S----------------------LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 + ++ + PD T L +P + +RVQ R Sbjct: 124 TSGGHGRGFNRSDPQTGGHAERLVRLLYAPFPKPDATFYLAVPPEKAARRVQARGR---- 179 Query: 157 ACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + +D + + + P ++D++ + + + I + Sbjct: 180 ------DVEDPIYLAAFAAAYHTL-PEFPG-FTVIDASGNAEELLATIQS 221 >gi|187933942|ref|YP_001885545.1| thymidylate kinase [Clostridium botulinum B str. Eklund 17B] gi|187722095|gb|ACD23316.1| dTMP kinase [Clostridium botulinum B str. Eklund 17B] Length = 208 Score = 80.8 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 25/207 (12%) Query: 8 SFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCG---VDE 61 FEGI+ GKTT I LK R + Y+ + PG + + Sbjct: 15 VFEGIDNVGKTTIIKELKGRICKEMGYECEIVAFPGNEERTLGGFVYDIHHNEKRYIDYS 74 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++ A+ +D ++ + KI++ DRF S+YAY G + + ++ Sbjct: 75 INDASLQLLHVASHIDLIQRKLMEKYSSSKIIMMDRFWWSTYAY-GLSGGLKSNVVSAI- 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + P+ + V+ + R+ DY KD++I Q + D+A Sbjct: 133 ------LAPELICWEKINVN------KIFLIERKDREKDYEADKDILIM----QNYRDLA 176 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 R P +C I+++ S + I N + Sbjct: 177 RKNP-KCQIINNDGSLEETTNMIFNEI 202 >gi|90411356|ref|ZP_01219368.1| putative hymidylate kinase [Photobacterium profundum 3TCK] gi|90327885|gb|EAS44216.1| putative hymidylate kinase [Photobacterium profundum 3TCK] Length = 203 Score = 80.5 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 18/154 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI +EG++ GKTT SL + + + V A R V+ D Sbjct: 1 MNK--FIVYEGLDACGKTTLSSLYAKERKSVVHSAVV-------EEALGLRKVI-----D 46 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--FLD 118 + ++ A++F + + AL G ++ DR+ S+ AYQ S + +D Sbjct: 47 SYQSKESALLFFLMNNYLKSHEVAGALESGD-VILDRYFFSTLAYQTALLSESIVKNIVD 105 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 +L + ++P+ + + + KR++ R Sbjct: 106 TLN-TTQNILLPEVIVFVKADAETINKRIEARDG 138 >gi|282162836|ref|YP_003355221.1| putative thymidylate kinase [Methanocella paludicola SANAE] gi|282155150|dbj|BAI60238.1| putative thymidylate kinase [Methanocella paludicola SANAE] Length = 186 Score = 80.1 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 72/210 (34%), Gaps = 30/210 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCGVDEF 62 F +G++G+GK T LK +L + +V + P A R ++ S Sbjct: 2 RFYVIDGLDGSGKDTQAYKLKEYLSKSGREVALRIHPASDNAFGHIAKRSLVKSGAF--- 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A F LD V ++I + ++ R+ + AY + + Sbjct: 59 -WRLVATFFYG--LDVVRSIILYCRGDRDVIFV-RYTLA-CAY------LPRAIIRPVYA 107 Query: 123 ISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + P LD+ + L+R++ R E + + +K R L I Sbjct: 108 VVNFLLPKSPHM-FFLDVSPEEALRRIKKRGDSEEMF-------ETLPHLQKNRSRALLI 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 +VD + V I+ + + Sbjct: 160 L----GNWKVVDGNVAPDKVFEQIVGSLSD 185 >gi|73994339|ref|XP_851996.1| PREDICTED: similar to deoxythymidylate kinase (thymidylate kinase) [Canis familiaris] Length = 156 Score = 80.1 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 13/126 (10%) Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 +I+ L +G L+ DR+ S A+ + + LD ++ V PD + L L + Sbjct: 26 LIKKKLSQGITLIVDRYAFSGVAFTSAK---EDFSLDWCKQPDVGLPKPDLVVFLQLRLA 82 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201 R + +E D E+ + F + +Q +VD++ S ++V Sbjct: 83 EAATR--------GEFGRERYE--DGKFQERALRRFHQLMADQTVNWKMVDASKSIEAVH 132 Query: 202 TNILNI 207 I + Sbjct: 133 KEIHAL 138 >gi|226310244|ref|YP_002770138.1| hypothetical protein BBR47_06570 [Brevibacillus brevis NBRC 100599] gi|226093192|dbj|BAH41634.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 191 Score = 79.7 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 87/218 (39%), Gaps = 29/218 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M ++FEGI+ K +LL+ L+ Y V P A + L C ++ Sbjct: 1 MRQPTIVAFEGIDANAKEAQAALLEENLRCLGYKVKRVSFPRLDTPIGAVIGMWLRCEIE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +A +F A LD+ + R + ++ D + S+Y Y +D+ + ++ Sbjct: 61 -LDEKAVGKLFEADFLDYQREMARLSKENVDFIIMDHYELSNYYYFYIKDT-PLSWYATM 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 +++ PD T L VD + + K ++ +L + Sbjct: 119 SDLTK---RPDATFFLRTEVD-----------------------ANHAMLLKVQEAYLSL 152 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL-VQKRVS 217 A H +D+A + + NIL +V +L ++KRV+ Sbjct: 153 AHASRRSVHTLDTAIGVERMQKNILQVVHQLHLKKRVT 190 >gi|325958278|ref|YP_004289744.1| Thymidylate kinase [Methanobacterium sp. AL-21] gi|325329710|gb|ADZ08772.1| Thymidylate kinase [Methanobacterium sp. AL-21] Length = 197 Score = 79.7 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 29/214 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFG 63 FI +G++G+GK T L+ V V P P A+ LL G + Sbjct: 2 RFIVVDGLDGSGKDTQAKLIADKYLANGESVIVRSHPSEDNPYGIMAKKALL--GHGKLD 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +A V +R ++ R+L AY L + Sbjct: 60 HIMASVYYALD----VIRSVRVYKESADNVIMVRYLM-GVAY------LPMPIASLLYKF 108 Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + V+P + LD+ + ++R+ +R D K R+ L + Sbjct: 109 FI-TVLPSSEYMFFLDVEPAVLMERLSSRSEKEMFENPDDL--------VKVRKKALKLT 159 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 HI+++ S + I I+ +L +K+ Sbjct: 160 EG----WHIIENGQSLEDSQKKIAEILDDLDKKK 189 >gi|52078510|ref|YP_077301.1| deoxyguanosine kinase [Bacillus licheniformis ATCC 14580] gi|52783873|ref|YP_089702.1| deoxyguanosine kinase [Bacillus licheniformis ATCC 14580] gi|319648538|ref|ZP_08002753.1| dgk protein [Bacillus sp. BT1B_CT2] gi|52001721|gb|AAU21663.1| deoxyguanosine kinase [Bacillus licheniformis ATCC 14580] gi|52346375|gb|AAU39009.1| Dgk [Bacillus licheniformis ATCC 14580] gi|317389386|gb|EFV70198.1| dgk protein [Bacillus sp. BT1B_CT2] Length = 207 Score = 79.7 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 40/227 (17%), Positives = 79/227 (34%), Gaps = 34/227 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ FI+ EG GAGKTT S+L L V P + D Sbjct: 1 MNTAPFIAVEGPIGAGKTTLASMLSEKLSLSLVKEIVEENPFLDKFYD---------EKD 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+ + E + F R +E+ + L ++ D + + + + + L+ Sbjct: 52 EWSFQLE-MFFLCNRYKQLEDTEKKYLHHHMPVVSDYHIYKNLIF--AERTLEGKKLEKY 108 Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQ 175 ++I P+ I + + L+R++ R FE++ D E+ Sbjct: 109 RKIYQLLTEDLPKPNVIIYIRASLPTLLERIKKRGRP--------FEQEMDKQYLEQLIN 160 Query: 176 IFLDIARNQPDR-----CHIVDSAHS----FQSVATNILNIVWELVQ 213 + + + ++ ++V I + V E ++ Sbjct: 161 DYEAAIKQFKESDPPIPVIEINGDQEDFVISEAVFNRIADQVKEYIE 207 >gi|229917438|ref|YP_002886084.1| deoxynucleoside kinase [Exiguobacterium sp. AT1b] gi|229468867|gb|ACQ70639.1| deoxynucleoside kinase [Exiguobacterium sp. AT1b] Length = 211 Score = 78.9 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 17/165 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG G GKT+ ++ + + + V P E +E+ Sbjct: 1 MFITVEGPIGVGKTSLAHIISQHFSMQMLNEIVEENPFLGKFYEDI---------EEWSF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQ 121 + E + F R ++++ + L + + ++ D + + + S + L + + Sbjct: 52 QTE-MFFLCNRFKQLDDIHKHHLSQQQSVVSDYHIFKNLIF--AHRSLKPAHLNKYEQIY 108 Query: 122 EISVQE-VMPDCTIILDLPVDIGLKRVQNRY-SLRESACLDYFER 164 +I + PD I L ++ +KRV R + E+ DY E+ Sbjct: 109 KILTHDMPKPDVVIYLHASIETLMKRVALRGREVEENMSRDYLEQ 153 >gi|308067671|ref|YP_003869276.1| hypothetical protein PPE_00888 [Paenibacillus polymyxa E681] gi|305856950|gb|ADM68738.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 206 Score = 78.9 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 74/221 (33%), Gaps = 24/221 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EG GAGKTT S+L L V P + D Sbjct: 1 MKQAPFIAVEGPIGAGKTTLASMLSTELHLPIIKEIVEENPFLDKFYQNI---------D 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119 E+ + E + F R +E+ + + + ++ D + + + + Sbjct: 52 EWSFQLE-MFFLCNRYKQLEDTGLQYIEKAQPVISDYHIYKNLIFAERTLKGVKLEKYRQ 110 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 + + + PD I + ++ L R++ R E Y E+ + + Sbjct: 111 IYHLLTDDMPKPDIIIYIRADLNTLLGRIRKRARSFEQEMDPAYLEQLIIDY----DKGM 166 Query: 178 LDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212 +A P R V+ V I++ V EL+ Sbjct: 167 QFLAEQSPSPRILTVNGN-EIDFVENQAQFKQIVSDVKELI 206 >gi|119960496|ref|YP_949169.1| thymidylate kinase [Arthrobacter aurescens TC1] gi|119947355|gb|ABM06266.1| putative Thymidylate kinase [Arthrobacter aurescens TC1] Length = 193 Score = 78.5 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 25/207 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63 + I GI+G+GKTT L + + A R LLS + Sbjct: 1 MLIVLTGIDGSGKTTAARALVDSALAEGRSALLLSN-----HAARRRMSLLSARYGWKVP 55 Query: 64 AEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + R+ +V ++ A +++ DR L A + + L L Sbjct: 56 PRVADFIETGVRVFNV--LVNHARARQFDGLVVMDRHLHCQLALRQANGLRRGRLLPWLL 113 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E + D + D I +RV R + +++ V R + + Sbjct: 114 E---KLPAADLHVHFDADPTIAHERVMARGT----------DQETVADLRAFRDAYRSLP 160 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +VD++ V + ++ Sbjct: 161 EYED--FAVVDASGEPGDVQAQLNRVI 185 >gi|304315230|ref|YP_003850377.1| thymidylate kinase-related protein [Methanothermobacter marburgensis str. Marburg] gi|302588689|gb|ADL59064.1| thymidylate kinase-related protein [Methanothermobacter marburgensis str. Marburg] Length = 200 Score = 78.5 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 79/212 (37%), Gaps = 35/212 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63 FI +G++GAGK TH L++R + V P P + AR LL G Sbjct: 2 RFIVIDGLDGAGKDTHAELIRRRYLERGERVIFRSHPEEDNPYGKRARKALLIGGRIN-- 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A VF A LD + ++ L+ R+L AY L S+ Sbjct: 60 -HIRAAVFYA--LDVIRSLWLYHWRSNPGPDTLIFSRYLM-GVAY-------LPGPLASI 108 Query: 121 QEISVQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + V+P T LD+ + L+R+ R +++ + RQ Sbjct: 109 MYRLLSGVLP--TTKYMFFLDVSPEESLRRLMERDEHEMF--------ENLEDLTRTRQK 158 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L +A + +I+++ S V I I+ Sbjct: 159 ALRLASD----WYIINTEDSIADVQRRIDEIL 186 >gi|311898057|dbj|BAJ30465.1| hypothetical protein KSE_46840 [Kitasatospora setae KM-6054] Length = 215 Score = 78.5 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 23/212 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 SG + EGI G+GK+T LL + L + V P A +V D Sbjct: 16 RSGALVVLEGISGSGKSTLSGLLAQRLGAEVLHVI------PNPLAGLIGYV-----NDH 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + A LD ++ R AL+ G ++ DR+ S + + Sbjct: 65 GGTLTQFAFHLAGLLDGADSA-RRALVSGSLV-ADRWTGSVVVNHAAVNQLDLEVAAA-- 120 Query: 122 EISVQ-EVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 + + +P D T+ L + K +++R R + D F + + + ++++ Sbjct: 121 QFAPYLGYLPRADLTVYL----ETSEKEIRHRMETRPARPATDRFLVRRPQLLPRVQELY 176 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 A P I S + I ++ Sbjct: 177 RRFAATDPTGIAISTDGRSPDELTEEIHALLE 208 >gi|270004399|gb|EFA00847.1| hypothetical protein TcasGA2_TC003748 [Tribolium castaneum] Length = 211 Score = 78.5 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 22/161 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG++G GK+ L L + + + + R L A Sbjct: 56 LIILEGLDGCGKSRISRELSSKLSAE-------KWCTPPESIKHIRD-LFDDHPTLRTAY 107 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFL----D 118 + AA +E A+++ K ++ DR+ S+ AY Q DSS + D Sbjct: 108 YALGNYIAA----LECT---AILKQKPVVMDRYWHSTAAYAIAQAVYDSSGATEMPPEGD 160 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 S + + P I LD+ D+ L+R+ R + L Sbjct: 161 SFYKWPQDLLQPSIVIFLDVDEDVRLERLSRRKTTTTQEDL 201 >gi|33563150|dbj|BAC81722.1| pseudo thymidylate kinase [Onion yellows phytoplasma] Length = 125 Score = 78.1 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 9/119 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I+ L+ L+ + + G + + R + L+ + Sbjct: 2 KLIVFEGLDGSGKTSLINSLQPQLKT---PHQLYQGLGSSSIGKEIRDLFLN--FQQVDY 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A + + ++++ DR+L S+YAYQ S + L L++I Sbjct: 57 LTRFYLSLANMAQIQAELFK----NNQLIILDRWLPSAYAYQLFPFSKEKKQLPPLKKI 111 >gi|326774410|ref|ZP_08233675.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1] gi|326654743|gb|EGE39589.1| Thymidylate kinase [Streptomyces cf. griseus XylebKG-1] Length = 232 Score = 78.1 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 52/160 (32%), Gaps = 27/160 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-------REPGGTPAAEAARHVLLS 56 G I+F G +GAGK+T + L + L + + +PG + + ++ Sbjct: 15 GRLITFVGGDGAGKSTLATRLHQALNDAGHRAVLVGKTSTTAADPGLSDYLDRLNTLVYR 74 Query: 57 CGV---DEFGAEAEAIVFAA-----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 G + AA RL VI+PAL G ++ D A Sbjct: 75 RDTRVAQACGDHYWLLALAAWYTLQDRL-----VIQPALAAGTHVVLDNSPHKILARYAV 129 Query: 109 RDSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKR 146 + + +P D LDL L R Sbjct: 130 NPDIDPRLPERV-----FAHLPAGDLVFFLDLSAREALAR 164 >gi|33563154|dbj|BAC81724.1| pseudo thymidylate kinase [Onion yellows phytoplasma] Length = 145 Score = 78.1 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 56/137 (40%), Gaps = 11/137 (8%) Query: 79 VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE-----VMPDCT 133 + + ++++ DR+L S+YAYQ S + L L++I PD Sbjct: 1 MAQIQAELFKNNQLIILDRWLPSAYAYQLFPFSKEKKQLSPLKKIFKLNHETILKKPDLL 60 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH--IV 191 I LD+ IG R + + + + D ER+ + + RQ + + I+ Sbjct: 61 IYLDIDPLIGRTRKKKQKNHQR----DLIERQSLTYFQNVRQGYDHYLTHYTSDIKKLIL 116 Query: 192 DSAHSFQSVATNILNIV 208 + + S +S I+ + Sbjct: 117 NGSDSIKSNVKQIIKQI 133 >gi|332188674|ref|ZP_08390389.1| thymidylate kinase family protein [Sphingomonas sp. S17] gi|332011291|gb|EGI53381.1| thymidylate kinase family protein [Sphingomonas sp. S17] Length = 223 Score = 78.1 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 86/225 (38%), Gaps = 20/225 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEF 62 ++ EG +GAGK T + + L P T A L Sbjct: 3 FLLAIEGADGAGKATATAAVTERLNAAGLSAAALSFPRYAETVGGWALGEYLAGRLPHAA 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-----RDSSQHLFL 117 E A ++A R + +++ A +++ DR++ S+ AYQ + + ++ Sbjct: 63 APETAATLYALDRFESRPHLVELA-ERHDVIVFDRYIASNMAYQAAQVPTEQAEALLQWI 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIG---LKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L+ + + P ++ LD P++I + R + R E+ D +E D+ + + R Sbjct: 122 EQLETVQFRLPAPHLSVYLDTPLEIARDLIARKRKRSYTDETY--DAYEA-DLGLQARVR 178 Query: 175 QIFLDIAR----NQPDRCHIVDSA--HSFQSVATNILNIVWELVQ 213 + +A + V ++A I +V E ++ Sbjct: 179 ANYAAMADGAMLGEWATVSTVAGGNLRDPAAIADEITALVTERLR 223 >gi|5650772|gb|AAD45944.1|AF089813_7 putative thymidylate kinase [Synechococcus sp. PCC 7002] Length = 101 Score = 78.1 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI FEGI+G+G +T LL + QR+ ++ EP R L Sbjct: 8 KFIVFEGIDGSGSSTQAELLYQHFQRQKIPAVLSPEPSNGIIGNLVRETLRQRLRFTTDP 67 Query: 65 ----EAEAIVFAAARLDHVENVI 83 A +FA R DH+ N I Sbjct: 68 VQLNRQLAYLFAGDRHDHLYNEI 90 >gi|39938876|ref|NP_950642.1| hypothetical protein PAM_390 [Onion yellows phytoplasma OY-M] gi|39939133|ref|NP_950899.1| hypothetical protein PAM_647 [Onion yellows phytoplasma OY-M] gi|39721985|dbj|BAD04475.1| hypothetical protein [Onion yellows phytoplasma OY-M] gi|39722242|dbj|BAD04732.1| hypothetical protein [Onion yellows phytoplasma OY-M] Length = 126 Score = 77.8 bits (191), Expect = 9e-13, Method: Composition-based stats. Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 11/120 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63 I FEG++G+GKT+ I+ L+ L+ H +P G + + R + L+ + Sbjct: 3 KLIVFEGLDGSGKTSLINSLQPQLK----TPHQLYQPFGSSSIGKEIRDLFLN--FQQVD 56 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A + + ++++ DR+L S+YAYQ S + L L++I Sbjct: 57 YLTRFYLSLANMAQIQAELFK----NNQLIILDRWLPSAYAYQLFPFSKEKKQLPPLKKI 112 >gi|213422228|ref|ZP_03355294.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 79 Score = 77.8 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 4/75 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLS---CGVDE 61 +I EG+EGAGKTT ++ L++ ++ TREPGGT AE R ++L G + Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTREPGGTQLAEKLRSLVLDIRSVGDEV 64 Query: 62 FGAEAEAIVFAAARL 76 +AE ++F AAR+ Sbjct: 65 ITDKAEVLMFYAARV 79 >gi|288560482|ref|YP_003423968.1| thymidylate kinase Tmk2 [Methanobrevibacter ruminantium M1] gi|288543192|gb|ADC47076.1| thymidylate kinase Tmk2 [Methanobrevibacter ruminantium M1] Length = 192 Score = 77.8 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 25/216 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ +G++G+GK T +K +++ V + ++ L G Sbjct: 1 MKR--FIAIDGLDGSGKDTQARKIKEKYEQEGTVVIRSHPTSDNFFGRHSKSALEKKG-- 56 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + A + +VI+ + ++ R+ + +Y + S L + Sbjct: 57 KLNKIIATLCYGAD---AIRSVIK-YYGKYDTVIFVRYTLA-VSYLSKAISVPVYKLVCV 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + LD+ ++RV++R E FE D K R + Sbjct: 112 LLPISEYF-----FYLDVSPKELVRRVKSRNEKEEM-----FENYDA--FVKVR----KM 155 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 A +++ + S + + I I+ EL +K + Sbjct: 156 AEPVLYNWNVIPADDSPDEIFSRIEAILDELDKKLL 191 >gi|126303911|ref|XP_001381291.1| PREDICTED: similar to thymidylate kinase family LPS-inducible member [Monodelphis domestica] Length = 496 Score = 77.4 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 26/226 (11%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + + + V + P P R + + Sbjct: 264 QKGKFPVIAIEGLDATGKTTVTHSIAKTMNA----VFLKSPP---PCISQWRKIFDNEPA 316 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117 A + A + + + ++ DR+ S+ AY + S Sbjct: 317 IIRRAYYSLGNYIIA-----SEIAKASTQAP--VIVDRYWHSTAAYAIATEISGLPHYLP 369 Query: 118 ---DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + + + PD ++L R+Q R + + + + EK Sbjct: 370 PAHHPIYQWPKDLLKPDIILLLTTTPKERELRIQERGLEKTKEEEEL--EVNKLFREKVE 427 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 + + P CH+VD+ V N+L+++ + ++ L Sbjct: 428 MSYKRM--ENPG-CHLVDAGPERGEVIQNVLDVIKNSFAQDINLLP 470 >gi|94971641|ref|YP_593689.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345] gi|94553691|gb|ABF43615.1| thymidylate kinase [Candidatus Koribacter versatilis Ellin345] Length = 235 Score = 77.4 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 41/198 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD----- 60 +SF G++G+GK+T I L+ L + R + + Sbjct: 11 LVSFSGLDGSGKSTQIDNLRATLHANGLTTTLLAFWDNVVVGTRWREGFVHKMYNSEKGI 70 Query: 61 ----------------EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSY 103 + + A ++ H+ V+ A G +++ DR++ Sbjct: 71 GAPDKPVNRQDKNVRKWYLSLARHGLYLMD-AIHLRMVVARARRSGADVVIMDRYIYDEL 129 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 A ++ F+ ++ I PD +LD V+ R Sbjct: 130 ANLPLQNKLTRSFIRFVRAIV---PTPDVAYLLDADVEAARARKPE-------------- 172 Query: 164 RKDVMIHEKRRQIFLDIA 181 V K R+ + +A Sbjct: 173 -YPVEFMHKCRRWYYQLA 189 >gi|212637864|ref|YP_002314384.1| Deoxyguanosine kinase [Anoxybacillus flavithermus WK1] gi|212559344|gb|ACJ32399.1| Deoxyguanosine kinase [Anoxybacillus flavithermus WK1] Length = 212 Score = 77.0 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 77/216 (35%), Gaps = 30/216 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ FI+ EG G GKT+ ++ Q + V P E + Sbjct: 1 MSRVPFITVEGPIGVGKTSLAKVISTHFQYELLKEIVDENPFLGKFYENI---------E 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118 E+ + E + F R +E+V + L GK ++ D + + +A Q + ++ Sbjct: 52 EWSFQTE-MFFLCNRYKQLEDVEKNFLNNGKPVVADYHIFKNLIFAKQTLKGKQYEKYVR 110 Query: 119 SLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ- 175 + +I + P+ I L + L+R+ R E +Y ++ + Q Sbjct: 111 -IYDILTNDMPKPNVVIYLHASLHTLLERIAMRGREFEKNIDPNYLQQLSHAYEQAMEQF 169 Query: 176 ----------IF----LDIARNQPDRCHIVDSAHSF 197 F LD DR +I++ S Sbjct: 170 EQAHPHIPVLRFNGDELDFVHRDKDRFYILNELQSV 205 >gi|82750265|ref|YP_416006.1| deoxypurine kinase subunit [Staphylococcus aureus RF122] gi|82655796|emb|CAI80196.1| deoxypurine kinase subunit [Staphylococcus aureus RF122] Length = 205 Score = 77.0 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 85/219 (38%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI EG G GK++ L + L +T P + E Sbjct: 1 MNKP-FIVIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 51 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 105 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199 >gi|310640406|ref|YP_003945164.1| sec-independent protein translocase, tatc subunit [Paenibacillus polymyxa SC2] gi|309245356|gb|ADO54923.1| Sec-independent protein translocase, TatC subunit [Paenibacillus polymyxa SC2] Length = 217 Score = 76.6 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 74/227 (32%), Gaps = 36/227 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EG GAGKTT S+L L V P + D Sbjct: 12 MKQAPFIAVEGPIGAGKTTLASMLSTELHLPMIKEIVEENPFLDKFYQNI---------D 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119 E+ + E + F R +E+ + + + ++ D + + + + Sbjct: 63 EWSFQLE-MFFLCNRYKQLEDTGLQYIEKAQPVISDYHIYKNLIFAERTLKGVKLEKYRQ 121 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER------KDVMIHE 171 + + + PD + + +D L R++ R E Y E+ K + Sbjct: 122 IYHLLTDDMPKPDIIVYIRADLDTLLGRIRKRGRSFEQEMDPAYLEQLITDYDKGIQF-- 179 Query: 172 KRRQIFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212 +A P R V+ V I++ V EL+ Sbjct: 180 --------LAEQSPAPRILTVNGN-EIDFVENQAQFEQIVSDVKELI 217 >gi|220914159|ref|YP_002489468.1| thymidylate kinase [Arthrobacter chlorophenolicus A6] gi|219861037|gb|ACL41379.1| thymidylate kinase [Arthrobacter chlorophenolicus A6] Length = 203 Score = 76.6 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 29/212 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I GI+G+GK+T L + ++ + + A VL + + A Sbjct: 1 MIIVLTGIDGSGKSTAARALVQAVRARGGKAMLLSN----HAGRRTMSVLAARWGVQLPA 56 Query: 65 EAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A AA + V NV+ L +++ DR L A + + + FL L Sbjct: 57 RAAD---AAETVLRVANVLVSHLRARRFDGMVVIDRHLHCQLALRSMKGLPRGRFLPWLL 113 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 P + LDL +R+ R + + + + R + + Sbjct: 114 A---ALPQPAAVVHLDLEPAEAHRRITARGT----------DSETLADLSAFRDAYAGL- 159 Query: 182 RNQPD--RCHIVDSAHSFQSVATNILNIVWEL 211 P+ VD++ + +L V L Sbjct: 160 ---PEFGGFIRVDASLPAAELVQRMLQAVDTL 188 >gi|308171907|ref|YP_003918612.1| deoxyguanosine kinase [Bacillus amyloliquefaciens DSM 7] gi|307604771|emb|CBI41142.1| deoxyguanosine kinase [Bacillus amyloliquefaciens DSM 7] gi|328551715|gb|AEB22207.1| deoxyguanosine kinase [Bacillus amyloliquefaciens TA208] gi|328909975|gb|AEB61571.1| deoxyguanosine kinase [Bacillus amyloliquefaciens LL3] Length = 207 Score = 76.6 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 24/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG GAGKTT S+L L + V P + + Sbjct: 1 MNRAPFIAVEGPIGAGKTTLASMLSEELGFPMINEIVEDNPYLDKFYDNI---------E 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119 E+ + E + F R +E+ R L +G+ +L D + + + + Sbjct: 52 EWSFQLE-MFFLCHRYKQLEDTDRDYLKQGQPVLSDYHIYKNVIFAERTLHGQKLEKYKQ 110 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 + + ++ P+ + + + L+R++ R E Y ER RQ Sbjct: 111 IYHLLTHDLPKPNVIVYIKASLPTLLQRIEKRGRPFEKNIEHQYLERLIADYDTAIRQ-- 168 Query: 178 LDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELVQ 213 + PD +D + V I V EL++ Sbjct: 169 --LQEEDPDISVLTIDGD-TEDFVLNKTDYERIARQVKELIK 207 >gi|282910198|ref|ZP_06318002.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus WBG10049] gi|282325590|gb|EFB55898.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus WBG10049] Length = 220 Score = 76.6 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 16 MNK-AFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 66 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 120 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 121 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 176 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 177 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 214 >gi|151220731|ref|YP_001331553.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str. Newman] gi|161508797|ref|YP_001574456.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253731163|ref|ZP_04865328.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253732566|ref|ZP_04866731.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH130] gi|257424671|ref|ZP_05601098.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 55/2053] gi|257427339|ref|ZP_05603738.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 65-1322] gi|257429976|ref|ZP_05606360.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 68-397] gi|257432677|ref|ZP_05609037.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus E1410] gi|257435581|ref|ZP_05611629.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M876] gi|258422596|ref|ZP_05685502.1| deoxynucleoside kinase [Staphylococcus aureus A9635] gi|258452709|ref|ZP_05700707.1| deoxynucleoside kinase [Staphylococcus aureus A5948] gi|282903145|ref|ZP_06311036.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus C160] gi|282904935|ref|ZP_06312793.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus Btn1260] gi|282907885|ref|ZP_06315720.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282913390|ref|ZP_06321179.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus M899] gi|282915880|ref|ZP_06323645.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus D139] gi|282918345|ref|ZP_06326082.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C427] gi|282923307|ref|ZP_06330987.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C101] gi|282924472|ref|ZP_06332144.1| deoxynucleoside kinase [Staphylococcus aureus A9765] gi|283769714|ref|ZP_06342606.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus H19] gi|283957355|ref|ZP_06374808.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293500436|ref|ZP_06666287.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 58-424] gi|293509381|ref|ZP_06668092.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M809] gi|293523968|ref|ZP_06670655.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus M1015] gi|294850334|ref|ZP_06791068.1| deoxynucleoside kinase [Staphylococcus aureus A9754] gi|150373531|dbj|BAF66791.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str. Newman] gi|160367606|gb|ABX28577.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725128|gb|EES93857.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253729495|gb|EES98224.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH130] gi|257272241|gb|EEV04364.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 55/2053] gi|257275532|gb|EEV07005.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 65-1322] gi|257279173|gb|EEV09774.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 68-397] gi|257282092|gb|EEV12227.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus E1410] gi|257284772|gb|EEV14891.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M876] gi|257847168|gb|EEV71176.1| deoxynucleoside kinase [Staphylococcus aureus A9635] gi|257859582|gb|EEV82432.1| deoxynucleoside kinase [Staphylococcus aureus A5948] gi|282314175|gb|EFB44565.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C101] gi|282317479|gb|EFB47851.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus C427] gi|282320176|gb|EFB50521.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus D139] gi|282322422|gb|EFB52744.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus M899] gi|282328269|gb|EFB58547.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus WW2703/97] gi|282331760|gb|EFB61271.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus Btn1260] gi|282592883|gb|EFB97887.1| deoxynucleoside kinase [Staphylococcus aureus A9765] gi|282596100|gb|EFC01061.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus C160] gi|283459861|gb|EFC06951.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus H19] gi|283790806|gb|EFC29621.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920931|gb|EFD97992.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus M1015] gi|291095441|gb|EFE25702.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 58-424] gi|291467478|gb|EFF09993.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus M809] gi|294822846|gb|EFG39281.1| deoxynucleoside kinase [Staphylococcus aureus A9754] gi|320141793|gb|EFW33621.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MRSA177] gi|323439829|gb|EGA97546.1| deoxypurine kinase subunit [Staphylococcus aureus O11] gi|323443070|gb|EGB00690.1| deoxypurine kinase subunit [Staphylococcus aureus O46] Length = 220 Score = 76.6 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 16 MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 66 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 120 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 121 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 176 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 177 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 214 >gi|154684534|ref|YP_001419695.1| deoxyguanosine kinase [Bacillus amyloliquefaciens FZB42] gi|154350385|gb|ABS72464.1| Dgk [Bacillus amyloliquefaciens FZB42] Length = 207 Score = 76.2 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 78/222 (35%), Gaps = 24/222 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG GAGKTT ++L L + V P + + Sbjct: 1 MNRAPFIAVEGPIGAGKTTLATMLSEELGFPMINEIVEDNPYLDKFYDNI---------E 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS 119 E+ + E + F R +E+ R L +G+ +L D + + + + Sbjct: 52 EWSFQLE-MFFLCHRYKQLEDTDRDYLKQGQPVLSDYHIYKNVIFAERTLHGQKLEKYKQ 110 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 + + ++ P+ + + + L+R++ R E Y ER RQ Sbjct: 111 IYHLLTHDLPKPNIIVYIKASLPTLLQRIEKRGRPFEKNIEHQYLERLITDYDTAIRQ-- 168 Query: 178 LDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELVQ 213 + PD +D + V I V EL++ Sbjct: 169 --LQEEDPDISVLTIDGD-TEDFVLNKTDYERIARQVKELIK 207 >gi|297208729|ref|ZP_06925157.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297590552|ref|ZP_06949191.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MN8] gi|300912819|ref|ZP_07130261.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH70] gi|304381844|ref|ZP_07364491.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|296886674|gb|EFH25579.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297576851|gb|EFH95566.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MN8] gi|300885923|gb|EFK81126.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH70] gi|302750449|gb|ADL64626.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304339630|gb|EFM05577.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|320141578|gb|EFW33417.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MRSA131] Length = 215 Score = 76.2 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 11 MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 61 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 115 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 116 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 171 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 172 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 209 >gi|148267017|ref|YP_001245960.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH9] gi|150393064|ref|YP_001315739.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH1] gi|257795344|ref|ZP_05644323.1| deoxynucleoside kinase [Staphylococcus aureus A9781] gi|258408969|ref|ZP_05681250.1| deoxynucleoside kinase [Staphylococcus aureus A9763] gi|258420393|ref|ZP_05683336.1| deoxynucleoside kinase [Staphylococcus aureus A9719] gi|258439313|ref|ZP_05690245.1| deoxynucleoside kinase [Staphylococcus aureus A9299] gi|258444053|ref|ZP_05692390.1| deoxynucleoside kinase [Staphylococcus aureus A8115] gi|258446322|ref|ZP_05694480.1| deoxynucleoside kinase [Staphylococcus aureus A6300] gi|258448415|ref|ZP_05696530.1| deoxynucleoside kinase [Staphylococcus aureus A6224] gi|258453771|ref|ZP_05701745.1| deoxynucleoside kinase [Staphylococcus aureus A5937] gi|282894993|ref|ZP_06303216.1| deoxynucleoside kinase [Staphylococcus aureus A8117] gi|282928895|ref|ZP_06336486.1| deoxynucleoside kinase [Staphylococcus aureus A10102] gi|295406934|ref|ZP_06816737.1| deoxynucleoside kinase [Staphylococcus aureus A8819] gi|297246242|ref|ZP_06930091.1| deoxynucleoside kinase [Staphylococcus aureus A8796] gi|147740086|gb|ABQ48384.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH9] gi|149945516|gb|ABR51452.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JH1] gi|257789316|gb|EEV27656.1| deoxynucleoside kinase [Staphylococcus aureus A9781] gi|257840320|gb|EEV64783.1| deoxynucleoside kinase [Staphylococcus aureus A9763] gi|257843583|gb|EEV67989.1| deoxynucleoside kinase [Staphylococcus aureus A9719] gi|257847650|gb|EEV71649.1| deoxynucleoside kinase [Staphylococcus aureus A9299] gi|257850723|gb|EEV74668.1| deoxynucleoside kinase [Staphylococcus aureus A8115] gi|257854916|gb|EEV77861.1| deoxynucleoside kinase [Staphylococcus aureus A6300] gi|257858284|gb|EEV81171.1| deoxynucleoside kinase [Staphylococcus aureus A6224] gi|257864027|gb|EEV86781.1| deoxynucleoside kinase [Staphylococcus aureus A5937] gi|282589503|gb|EFB94592.1| deoxynucleoside kinase [Staphylococcus aureus A10102] gi|282762675|gb|EFC02812.1| deoxynucleoside kinase [Staphylococcus aureus A8117] gi|294968165|gb|EFG44191.1| deoxynucleoside kinase [Staphylococcus aureus A8819] gi|297176840|gb|EFH36098.1| deoxynucleoside kinase [Staphylococcus aureus A8796] Length = 220 Score = 76.2 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 16 MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 66 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSPVEFQKFSK 120 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 121 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 176 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 177 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 214 >gi|312439023|gb|ADQ78094.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus TCH60] Length = 215 Score = 76.2 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 11 MNK-AFIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 61 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 115 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 116 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 171 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 172 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 209 >gi|288553873|ref|YP_003425808.1| deoxyguanosine kinase [Bacillus pseudofirmus OF4] gi|288545033|gb|ADC48916.1| Deoxyguanosine kinase [Bacillus pseudofirmus OF4] Length = 217 Score = 75.8 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 80/230 (34%), Gaps = 30/230 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + Q V P + E +E+ + Sbjct: 6 FIAVEGPIGVGKTSLAKAISLHYQYHLLKEIVHENPFLSKFYENI---------EEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEIS 124 E + F R +E++ R L ++ D + + + Q S Q+ ++ +I Sbjct: 57 TE-MFFLCNRYKQLEDIQRKFLASNVPVVADYHIYKNIIFAQRTLRSDQYEKYTAIYDIM 115 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----D 179 Q+ P+ I LD + LKR++ R E + D + R+ + Sbjct: 116 TQDMPKPNFIIYLDASLPTLLKRIEMRGREMEL-------KMDPAYLRQLREDYETAMAK 168 Query: 180 IARNQPDR-CHIVDSAHSFQSVA-----TNILNIVWELVQKRVSPLSSKK 223 A PD ++ V I ++ + ++ L S + Sbjct: 169 WAVEYPDIPIIRINGD-ELDFVQHEQDLQKIFTLIDDARKEGAFCLESTR 217 >gi|6045051|dbj|BAA85260.1| thymidylate kinase [Moritella marina] Length = 80 Score = 75.8 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAA-EAARHVLLSCGVDE- 61 F+ EG+EGAGK+T +S + +L + DV TREP E R ++ +E Sbjct: 4 KFLVIEGLEGAGKSTAVSTVINWLAEQGITDVITTREPWWHKIKPEKMRAIVKDVDTEEP 63 Query: 62 FGAEAEAIVFAAARLD 77 AE ++ AAR Sbjct: 64 LTESAELMLMYAARAQ 79 >gi|85858233|ref|YP_460435.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB] gi|85721324|gb|ABC76267.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB] Length = 487 Score = 75.8 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 48/247 (19%), Positives = 86/247 (34%), Gaps = 59/247 (23%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GL I+ G +GAGKTT I + ++L V + G PA +R +L G + Sbjct: 264 HGGLLIAIVGGDGAGKTTVIEEVHKWL---GRKFDVMKLHMGKPA--RSRTTILGSGFLK 318 Query: 62 FG--------------AEAEA--------IVFAAARLDHVENVIRPALMEGKILLCDRFL 99 G EAE +VF A R G +++CDR+ Sbjct: 319 IGTMLGLYPATADLYAEEAEFPGYPFLIRMVFLAYDRYLTYLKARRFASNGGLVICDRYF 378 Query: 100 DSSY--------AYQGERDSSQHLFLDSLQEISV----QEVMPDCTIILDLPVDIGLKRV 147 + + + + F++ L I + + PD I+L L +I ++R Sbjct: 379 LADLLTMDGPRCKMMAKAFNRSNFFMNWLIRIEASCYEKMMSPDLLIVLRLNPEIAVQRK 438 Query: 148 QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ--PDRCHIVDSAHSFQSVATNIL 205 + ++ R I +VDS+ + V + Sbjct: 439 TDETAVS------------------VRARSTSIWEYDWSKTSACVVDSSRPKEEVLAQVQ 480 Query: 206 NIVWELV 212 +++W + Sbjct: 481 SLIWRYL 487 >gi|302332270|gb|ADL22463.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus JKD6159] Length = 205 Score = 75.8 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 51 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 105 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYRKYY 161 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199 >gi|21282241|ref|NP_645329.1| hypothetical protein MW0512 [Staphylococcus aureus subsp. aureus MW2] gi|49482787|ref|YP_040011.1| deoxyadenosine kinase protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49485422|ref|YP_042643.1| putative deoxyadenosine kinase protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57651434|ref|YP_185490.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus COL] gi|87161275|ref|YP_493245.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88194320|ref|YP_499112.1| hypothetical protein SAOUHSC_00540 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|221141005|ref|ZP_03565498.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str. JKD6009] gi|262049600|ref|ZP_06022469.1| hypothetical protein SAD30_0394 [Staphylococcus aureus D30] gi|262052442|ref|ZP_06024642.1| hypothetical protein SA930_0278 [Staphylococcus aureus 930918-3] gi|284023568|ref|ZP_06377966.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus 132] gi|295427096|ref|ZP_06819732.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus EMRSA16] gi|21203677|dbj|BAB94377.1| MW0512 [Staphylococcus aureus subsp. aureus MW2] gi|49240916|emb|CAG39583.1| putative deoxyadenosine kinase protein [Staphylococcus aureus subsp. aureus MRSA252] gi|49243865|emb|CAG42290.1| putative deoxyadenosine kinase protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57285620|gb|AAW37714.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus COL] gi|87127249|gb|ABD21763.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87201878|gb|ABD29688.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|87312669|gb|ABD37700.1| deoxyguanosine kinase [Staphylococcus aureus] gi|259159688|gb|EEW44732.1| hypothetical protein SA930_0278 [Staphylococcus aureus 930918-3] gi|259162340|gb|EEW46913.1| hypothetical protein SAD30_0394 [Staphylococcus aureus D30] gi|269940130|emb|CBI48506.1| putative deoxyadenosine kinase protein [Staphylococcus aureus subsp. aureus TW20] gi|295128884|gb|EFG58514.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus EMRSA16] gi|298693888|gb|ADI97110.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus ED133] gi|315193921|gb|EFU24315.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus CGS00] gi|315196630|gb|EFU26977.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus CGS01] gi|329313278|gb|AEB87691.1| Deoxynucleoside kinase [Staphylococcus aureus subsp. aureus T0131] gi|329731045|gb|EGG67418.1| deoxyguanosine kinase [Staphylococcus aureus subsp. aureus 21189] gi|329731967|gb|EGG68323.1| deoxyguanosine kinase [Staphylococcus aureus subsp. aureus 21193] Length = 205 Score = 75.8 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 51 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSVEFQKFSK 105 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199 >gi|283469849|emb|CAQ49060.1| deoxypurine kinase subunit [Staphylococcus aureus subsp. aureus ST398] Length = 205 Score = 75.8 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 51 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSSIEFQKFSK 105 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199 >gi|308176132|ref|YP_003915538.1| putative dTMP kinase [Arthrobacter arilaitensis Re117] gi|307743595|emb|CBT74567.1| putative dTMP kinase [Arthrobacter arilaitensis Re117] Length = 206 Score = 75.4 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 21/202 (10%) Query: 8 SFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G +GAGK+T I L ++ L + + + + R F Sbjct: 23 VILGPDGAGKSTLIEALTRQLLNERIRARRLANAAARSWLTKFCRR-----SGITFPTFT 77 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + R +V + A G + + DR L + R L L L S + Sbjct: 78 QDFFETSIRGFNVARNMVSAAHSGGLSVMDRHLYCQLVLRRLRGHPSGLLLPWLAAKSTE 137 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 I+LD+ + +R+ +R + + + + R +L +A+ Sbjct: 138 CAR---IILLDIDPHLAYERIVSRGK----------DHETLEYLSESRDEYLRLAQLHG- 183 Query: 187 RCHIVDSAHSFQSVATNILNIV 208 I+D++ S + + ++ Sbjct: 184 -WIILDASLSTSLLVEQLRLVI 204 >gi|323488470|ref|ZP_08093716.1| hypothetical protein GPDM_03997 [Planococcus donghaensis MPA1U2] gi|323397862|gb|EGA90662.1| hypothetical protein GPDM_03997 [Planococcus donghaensis MPA1U2] Length = 212 Score = 75.4 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 83/220 (37%), Gaps = 26/220 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ L Q + V P E +E+ + Sbjct: 5 FITVEGPIGVGKTSLTKALADQNQFQLLKEIVDENPFLNKFYEDI---------EEWSFQ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEI- 123 E + F R + ++ + + + ++ D + + + ++++ +++ +I Sbjct: 56 TE-MFFLCNRYKQLADIQKKFISNHEPVVADYHIFKNLIFAKRTLPTAEYAKYEAIYKIL 114 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 +V P+ I L +D +KR++ R E +Y E+ HE F++ Sbjct: 115 TVDMPKPNMVIYLHASLDTLMKRIKLRGREFEQMITPEYMEQLAADYHE-----FIERFE 169 Query: 183 NQPDRCHIV--DSAHSFQSVATN-----ILNIVWELVQKR 215 + ++ + V N IL+ V +QKR Sbjct: 170 REHPEIPVLRFNGD-EIDFVQNNGDLQLILDKVDGTLQKR 208 >gi|15923547|ref|NP_371081.1| deoxypurine kinase [Staphylococcus aureus subsp. aureus Mu50] gi|15926235|ref|NP_373768.1| hypothetical protein SA0515 [Staphylococcus aureus subsp. aureus N315] gi|156978886|ref|YP_001441145.1| hypothetical protein SAHV_0555 [Staphylococcus aureus subsp. aureus Mu3] gi|253315667|ref|ZP_04838880.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255005351|ref|ZP_05143952.2| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus Mu50-omega] gi|269202180|ref|YP_003281449.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus ED98] gi|296276693|ref|ZP_06859200.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus MR1] gi|13700449|dbj|BAB41746.1| SA0515 [Staphylococcus aureus subsp. aureus N315] gi|14246325|dbj|BAB56719.1| similar to deoxypurine kinase [Staphylococcus aureus subsp. aureus Mu50] gi|156721021|dbj|BAF77438.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|262074470|gb|ACY10443.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus ED98] gi|285816258|gb|ADC36745.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus aureus 04-02981] gi|312829053|emb|CBX33895.1| deoxynucleoside kinase family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128850|gb|EFT84849.1| deoxynucleoside kinase [Staphylococcus aureus subsp. aureus CGS03] gi|329727900|gb|EGG64349.1| deoxyguanosine kinase [Staphylococcus aureus subsp. aureus 21172] Length = 205 Score = 75.4 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 86/219 (39%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L +T P + E Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHKLSQTLDFYEEKEIITENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDS 119 ++ + E + F R ++V + L +G ++ D + + + S + Sbjct: 51 KWSFQTE-MFFLCNRYKQFQDVTQ--LNQG--VVSDYHIHKNKIFAKNTLSPVEFQKFSK 105 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I ++ +MP+ I LD +D+ R+ R E E + ++ +K + + Sbjct: 106 IYDILTEDMIMPNMIIFLDADLDVLKSRIAKRNRSFEHQ----IEDEYLLKLKKDYREYY 161 Query: 179 DIARNQPDRCHIVDSAHSF-----QSVATNILNIVWELV 212 + ++ ++D+ S + +IL+I+ ++ Sbjct: 162 ESLQSNGSNVVLIDTT-SIDFLKNEQDYEDILHIILPMI 199 >gi|328950285|ref|YP_004367620.1| deoxynucleoside kinase [Marinithermus hydrothermalis DSM 14884] gi|328450609|gb|AEB11510.1| deoxynucleoside kinase [Marinithermus hydrothermalis DSM 14884] Length = 201 Score = 75.4 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 73/218 (33%), Gaps = 30/218 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG G GKTT L L + V P L + Sbjct: 1 MYIAIEGPIGVGKTTLARHLADHLNAELLLEVVEENPFLP---------LFYQDPQRYAF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122 + + F +R + + +P+L G ++ D D Y + L D Sbjct: 52 KVQVF-FLLSRYKQLLPLSQPSLFTGA-VVADYLFDKDYIFASLNLKDAEWELYADLYAH 109 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDIA 181 +S + PD TI L PV + L+R+ R FER+ + + + Sbjct: 110 LSPKLPAPDLTIYLRAPVPVLLERIHRRGRP--------FEREISPEYLTRLTEAYDRHF 161 Query: 182 RNQPDRCHIVDSA--------HSFQSVATNILNIVWEL 211 P ++D+ + VA +L V + Sbjct: 162 ERYPHPLWVLDNTEINYAENPADREWVAREVLQRVGQA 199 >gi|253575929|ref|ZP_04853263.1| deoxyguanosine kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844723|gb|EES72737.1| deoxyguanosine kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 207 Score = 75.1 bits (184), Expect = 6e-12, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 33/226 (14%) Query: 1 MNSGL-FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M FI+ EG GAGKTT ++L V P + Sbjct: 1 MKKPCPFIAVEGAIGAGKTTLATMLAERFDFPLLKEIVEENPFLDKFYQNI--------- 51 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLD 118 +E+ + E + F R +E+ ++ + G ++ D + ++ + Q + Sbjct: 52 EEWAFQLE-MFFLCNRYKQLEDTVKNYVSRGVPVVSDYHIYKNWIFAQRTLQGDKREKYR 110 Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQI 176 + + ++ P+ + + + LKR++ R FE+ D E+ + Sbjct: 111 QIYHLLTDDLPKPNVIVYIRAELATLLKRIEKRGRS--------FEQDIDPGYLERLIED 162 Query: 177 FL----DIARNQPDRCHI-VDSAHSFQSV-----ATNILNIVWELV 212 + I +P+ I +D V I+ + E + Sbjct: 163 YETAITQIQTREPETVVITIDGNM-LDFVEHPEHFEQIVAKIKEHL 207 >gi|297584356|ref|YP_003700136.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10] gi|297142813|gb|ADH99570.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10] Length = 217 Score = 75.1 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 67/170 (39%), Gaps = 15/170 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + + + + V P + E DE+ + Sbjct: 9 FIAVEGPIGVGKTSLATRIANHYKYELLKEIVDENPFLSKFYEDI---------DEWSFQ 59 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLDSLQEI 123 E + F R +E+ +L +GK ++ D + + +A Q + + D + +I Sbjct: 60 TE-MFFLCNRFKQLEDTYEKSLQKGKAVVSDYHIFKNHLFAKQTLKQQHFDKY-DRIYKI 117 Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171 + P+ I L + L+R++ R E A +Y + H+ Sbjct: 118 LTDGLPTPNLIIYLHASLPTLLERIKMRGRSMEQAMDPEYLRQLSSDYHQ 167 >gi|485966|emb|CAA83856.1| unknown [Pseudomonas syringae] Length = 209 Score = 75.1 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 77/226 (34%), Gaps = 33/226 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---------REPGGTPAAEAARHVLL 55 + I+ GI+GAGK+T L+R+L KN V+V P + + Sbjct: 1 MLITLAGIDGAGKSTQCRHLERWLVSKNIPVNVIDKWDVLKPEVFPECRFIQPDLDQLRV 60 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQ 113 E + A ++++ A + ++ + D + A + + + Sbjct: 61 CIAQMEGASRALFLIWSIA-------TVMKQYERDPHQVYILDGYWMKHLASEILYGNDE 113 Query: 114 HLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMI 169 L + V+P D + D+ V R R E R+ Sbjct: 114 QWLLGLV------SVLPPADTVLYFDVDV----ARTGVRKQAYTPYECGRNEVSRQAFDK 163 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 H+ + +D + ++D+ V+ + ++ L+Q R Sbjct: 164 HQLALKGLMDRWSSSMG-WTVIDANQPEALVSAALQEVLTPLLQGR 208 >gi|221105979|ref|XP_002169331.1| PREDICTED: similar to thymidylate kinase family protein [Hydra magnipapillata] Length = 78 Score = 75.1 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G F+ EG + +GK+T LL +L + R P + A + ++ + Sbjct: 1 MGRGAFVVLEGCDKSGKSTQCRLLVDYLNSLGKKTELWRFPERSTAIGQIINGYITKKNE 60 Query: 61 EFGAEAEAIVFAAARLDHV 79 +A ++F+A R + V Sbjct: 61 -LHDKAVHLMFSANRWELV 78 >gi|302657864|ref|XP_003020643.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517] gi|291184499|gb|EFE40025.1| hypothetical protein TRV_05241 [Trichophyton verrucosum HKI 0517] Length = 130 Score = 74.7 bits (183), Expect = 8e-12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 12/123 (9%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G + A ++F+A R + IR + G ++ DR+ S Y +++ + L Sbjct: 8 GEIQLDDHAVHLLFSANRWEAAAQ-IRQDIESGITVIVDRYSYSGAVYSAAKENKELQ-L 65 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D V PD L++ +++ R + +E V + +K ++F Sbjct: 66 DWAWRPEVGLPRPDIWFFLNISIEVAAAR--------GGYGTERYE--TVNLQKKVGKLF 115 Query: 178 LDI 180 L + Sbjct: 116 LSL 118 >gi|228904780|ref|ZP_04068834.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] gi|228854794|gb|EEM99398.1| Thymidylate kinase [Bacillus thuringiensis IBL 4222] Length = 180 Score = 74.7 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 17/188 (9%) Query: 30 RKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM 88 + Y+V + TP R L G G A + AA + + N Sbjct: 3 ERGYNVEQSEFHRYDTPTGGLIRQFL--DGEYNPGQLAIECIMAADKYAQL-NWFEELAE 59 Query: 89 EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148 + +L+ DR+L S Y + L + P+ I LD+ + +KR Sbjct: 60 KLDVLILDRYLVSQLVYSTANGVDIDFTANLLDRM----PEPNFQIFLDIEPEESMKRKG 115 Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--NQPDRCHIVDSAHSFQSVATNILN 206 D +E D + + R ++L + + I+D + + + IL Sbjct: 116 K------HGENDKYES-DKELLTRARDLYLRYMKLEEEDGNAMILDGTLAVEELHQQILE 168 Query: 207 IVWELVQK 214 L+ + Sbjct: 169 RTLSLLTE 176 >gi|212225008|ref|YP_002308244.1| hypothetical protein TON_1856 [Thermococcus onnurineus NA1] gi|212009965|gb|ACJ17347.1| Hypothetical protein TON_1856 [Thermococcus onnurineus NA1] Length = 222 Score = 74.3 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 82/236 (34%), Gaps = 50/236 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ I G +G GKTT +L L+ Y+ + + G+ Sbjct: 1 MDPPRLICIIGPDGTGKTTQAKMLIEKLREMGYEYEYRWMRFHHFISLPVLALARLMGLT 60 Query: 61 EFGAEAE--------------------AIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 E + ++ L + + P ++ K L+CDRF+ Sbjct: 61 EIQTLPDGRKIGYHHFYRSKLISTVYPITLYLDMLLAMIFKIYIPLKVQRKRLVCDRFIY 120 Query: 101 SSYAYQGERDSSQHLFLDSLQ----EISVQEVM--P-D-CTIILDLPVDIGLKRVQNRYS 152 + + LD+++ + + + + P D TI+L P + +R Sbjct: 121 DTLV-------DLTIDLDNIEFDNSKTAKKFLKLIPRDCLTILLIAPYEKIKER------ 167 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 RE D + KR + ++++ + P +D++ + V I+ IV Sbjct: 168 -REDLKFDKY-------LRKRIETYMELKKRFPQ-LVTIDASSEVEKVHNQIVEIV 214 >gi|23097471|ref|NP_690937.1| deoxypurine kinase subunit [Oceanobacillus iheyensis HTE831] gi|22775694|dbj|BAC11972.1| deoxypurine kinase subunit [Oceanobacillus iheyensis HTE831] Length = 216 Score = 74.3 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 30/228 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ L + V P E E+ + Sbjct: 6 FIAIEGPIGIGKTSLAKKLSDHFEFHLLKEIVEENPFLGKFYENI---------SEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E + F R +E++ + L + + ++ D + + + + + Q L+ ++I Sbjct: 57 TE-MFFLCNRFKQLEDINKDYLQQEQPVIADYHITKNMIF--AKRTLQQDKLEKYEKIYQ 113 Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF-LD 179 P+ I + +D LKR++ R E +Y + + F L+ Sbjct: 114 ILTEDIPTPNILIYIHADLDTILKRIRMRGREVEQHIDPEYLRQLSAD-----YEAFMLE 168 Query: 180 IARNQPDR-CHIVDSAHSFQSVA-----TNILNIVWELVQKRVSPLSS 221 R P ++ V I+ V L+ ++ L S Sbjct: 169 FERTHPHIPVLRINGDQ-MDFVQYQDHLEQIIGDVESLINEQCRALPS 215 >gi|326675692|ref|XP_699055.4| PREDICTED: UMP-CMP kinase 2, mitochondrial, partial [Danio rerio] Length = 561 Score = 74.3 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 44/218 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++ GKTT L++ L + P D Sbjct: 221 IVIEGLDATGKTTLTEALRQSLNA----TLLKSPPQCLAPFRQ--------RFDSEPPLI 268 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +A ++ + +L ++ DR+ S+ AY +++L Sbjct: 269 RRAFYALGNYITATHIAKESLRAP--VIVDRYWHSTAAYAIATAVGGR--VENL------ 318 Query: 127 EVMPDCTIIL--------------DLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHE 171 PD + + + + ++R+++R + + E + + + Sbjct: 319 -PKPDSELYVWPEDLLQPDLVLLLTVSPEERVRRLRDRGQDKTTEEA---ELEINQLFRL 374 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 K + + I P C VD++ S Q V + +++ Sbjct: 375 KVEEAYKRI--QNPS-CITVDASPSPQEVLKQVHHLIR 409 >gi|94264557|ref|ZP_01288343.1| hypothetical protein MldDRAFT_5200 [delta proteobacterium MLMS-1] gi|93455042|gb|EAT05273.1| hypothetical protein MldDRAFT_5200 [delta proteobacterium MLMS-1] Length = 432 Score = 73.9 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 90/234 (38%), Gaps = 42/234 (17%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---TREPGGTPAAEAARHV----- 53 G+ ++ EGI+G+GK+T I +L + + ++ ++ V G + R + Sbjct: 217 KKGIVVAVEGIDGSGKSTFIDVLNKSIPKEGRELFVQKSMAGRGFWRYSNKIRTIWRRSC 276 Query: 54 --------LLSCGVDEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 +L G+ E + F R ++N GK ++ DR+ Y Sbjct: 277 DRPGKMNSVLKNGLLPIVFIIEIGSLYFLFLRSRQLKN-------SGKNVIFDRYACLHY 329 Query: 104 AYQGE----RDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 Q R ++L++ L + PD + L++ + +R + + Sbjct: 330 IRQRVHNKNRFVGKNLYIQLLYLLSVRWFPSPDVFVYLNVDPLVAYERKKEDHVDELMEK 389 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++ V +++K + F IVDS + + + L++ W+ + Sbjct: 390 YLIYNKEVVPLYDKITECF------------IVDSTLPTEVIVSRFLSVYWQRL 431 >gi|260752279|ref|YP_003225172.1| hypothetical protein Za10_0034 [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258551642|gb|ACV74588.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 256 Score = 73.9 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 45/239 (18%) Query: 3 SGLFISFEGIEGAGKTTH----ISLLKRFLQRKNYDVHVTREPGGTPAAE------AARH 52 +G I+ G +G+GK++ I+ ++++ K Y + + G + + Sbjct: 25 TGKLIALVGCDGSGKSSLTTDLIAAIQKYTPVKRYYLGLGSGDLGRKIGQIPVVGSWIEN 84 Query: 53 VLLSCGVDEFGA--------EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 +L A + F + R +R AL G ++ DR+ + A Sbjct: 85 LLKQRATTTRTKGKKIPGVMTALVVYFFSLRRFCSYLKMRRALKAGITVITDRYPQAEIA 144 Query: 105 YQGERDSSQHL-----FLDSL--QEISVQ----EVMPDCTIILDLPVDIGLKRVQNRYSL 153 Q + F+ L E ++ PD + LD+ + R Sbjct: 145 GQCDGPGLSAAKAGNRFVSWLVRSEAALYQRMASFQPDLVLRLDVDPETAHAR------- 197 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++ K ++ A + ++D+ +++V +I+ +V + Sbjct: 198 KPDHDIEALRIKSEIMQHLTFGG----AHME-----VIDATRPYKAVWKDIVRLVQPYL 247 >gi|172056060|ref|YP_001812520.1| deoxynucleoside kinase [Exiguobacterium sibiricum 255-15] gi|171988581|gb|ACB59503.1| deoxynucleoside kinase [Exiguobacterium sibiricum 255-15] Length = 209 Score = 73.9 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 17/170 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI+ EG G GKT+ + + V P E +E+ Sbjct: 1 MFITVEGPIGVGKTSLANAISHHFSFSMLREIVEENPFLGKFYEDI---------EEWSF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + E + F R ++++ R L + + ++ D + + + S + LD ++I Sbjct: 52 QTE-MFFLCNRFKQLDDIERHYLSKQRSVVADYHIFKNLIF--AHRSLKVEHLDKYEQIY 108 Query: 124 ---SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169 + PD I LD +D +KRV R E Y E+ Sbjct: 109 SILTTDMPKPDAVIYLDASIDTLMKRVALRGREIEENMSRAYLEQLAADY 158 >gi|56552213|ref|YP_163052.1| hypothetical protein ZMO1317 [Zymomonas mobilis subsp. mobilis ZM4] gi|56543787|gb|AAV89941.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ZM4] Length = 256 Score = 73.9 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 45/239 (18%) Query: 3 SGLFISFEGIEGAGKTTH----ISLLKRFLQRKNYDVHVTREPGGTPAAE------AARH 52 +G I+ G +G+GK++ I+ ++++ K Y + + G + + Sbjct: 25 TGKLIALVGCDGSGKSSLTTDLIAAIQKYTPVKRYYLGLGSGDLGRKIGQIPVVGSWIEN 84 Query: 53 VLLSCGVDEFGA--------EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 +L A + F + R +R AL G ++ DR+ + A Sbjct: 85 LLKQRATTTRTKGKKIPGVMTALVVYFFSLRRFCSYLKMRRALKAGITVITDRYPQAEIA 144 Query: 105 YQGERDSSQHL-----FLDSL--QEISVQ----EVMPDCTIILDLPVDIGLKRVQNRYSL 153 Q + F+ L E ++ PD + LD+ + R Sbjct: 145 GQCDGPGLSAAKAGNRFVSWLVRSEAALYQRMASFQPDLVLRLDVDPETAHAR------- 197 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++ K ++ A + ++D+ +++V +I+ +V + Sbjct: 198 KPDHDIEALRIKSEIMQHLTFGG----AHME-----VIDATRPYKAVWKDIVRLVQPYL 247 >gi|15679111|ref|NP_276228.1| hypothetical protein MTH1100 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622201|gb|AAB85589.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 196 Score = 73.5 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 35/211 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAE 67 +G++GAGK TH L++R + V P P + AR LL G Sbjct: 2 IDGLDGAGKDTHAELIRRRYLERGEHVVFRSHPEDDNPYGKRAREALLRGGKVN---HIR 58 Query: 68 AIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A +F A LD + ++ L+ R+L AY L + Sbjct: 59 AAIFYA--LDVIRSLWLYHWRSNPGPDTLIFSRYLM-GVAY------LPGPLSSVLYRL- 108 Query: 125 VQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V+P T LD+ + L+R+ R LD R+ L + Sbjct: 109 LSRVLP--TTEYMFFLDVSPEESLRRLMERDEHEMFENLDDL--------TSTREKALRL 158 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A D +I+++ + V + I I+ L Sbjct: 159 A----DGWYIINTEDPIEDVQSRIDEILDRL 185 >gi|126649231|ref|XP_001388288.1| thymidylate kinase [Cryptosporidium parvum Iowa II] gi|126117126|gb|EAZ51226.1| thymidylate kinase [Cryptosporidium parvum Iowa II] Length = 166 Score = 73.1 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/142 (15%), Positives = 54/142 (38%), Gaps = 16/142 (11%) Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + ++F A R + + N I+ L G ++CDR+ S AY + Sbjct: 7 GKSIKMAPQVSHLLFTANRWE-LNNYIKENLENGIDVVCDRYSFSGIAYSSGAINLDF-- 63 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + PD + L++ +D+ S R ++ +E ++ R++ Sbjct: 64 -EWCKSREQGLISPDIVVFLEVNLDLS--------STRSGFGVEIYE--NISDQISVRKV 112 Query: 177 FLDIARNQPDRCHIVDSAHSFQ 198 + + ++++ S Sbjct: 113 YQKFS--NYSFWRNINASQSPD 132 >gi|241761714|ref|ZP_04759801.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374022|gb|EER63555.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 256 Score = 72.8 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 83/245 (33%), Gaps = 57/245 (23%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I+ G +G+GK++ + L +Q+ V R G + + R + + Sbjct: 25 TGKLIALVGCDGSGKSSLTTDLIAAIQKY---TPVKRYYLGLGSGDLGRKI---GQIPVV 78 Query: 63 GAEAEAIV------------------------FAAARLDHVENVIRPALMEGKILLCDRF 98 G+ E ++ F + R +R AL G ++ DR+ Sbjct: 79 GSWIENLLKQRATTTRTKGKKIPGVMTALVVYFFSLRRFCSYLKMRRALKTGITVITDRY 138 Query: 99 LDSSYAYQGERDSSQHL-----FLDSL--QEISVQ----EVMPDCTIILDLPVDIGLKRV 147 + A Q + F+ L E ++ PD + LD+ + R Sbjct: 139 PQAEIAGQCDGPGLSAAKAGNRFVSWLVRSEAALYQRMASFQPDLVLRLDVDPETAHAR- 197 Query: 148 QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + ++ K ++ A + ++D+ +++V +I+ + Sbjct: 198 ------KPDHDIEALRIKSEIMQHLTFGG----AHME-----VIDATRPYKAVWKDIVRL 242 Query: 208 VWELV 212 V + Sbjct: 243 VQPYL 247 >gi|37680376|ref|NP_934985.1| thymidylate kinase [Vibrio vulnificus YJ016] gi|37199123|dbj|BAC94956.1| thymidylate kinase [Vibrio vulnificus YJ016] Length = 206 Score = 72.8 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 62/154 (40%), Gaps = 18/154 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI +EG++ GKTT S + +++ V E R ++ D Sbjct: 1 MNK--FIVYEGLDACGKTTLSSRYAQERNTRSHFAIV-------QEGEQLRELI-----D 46 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--D 118 ++ A++F + A G ++ DR++ S+ AYQ + + + + Sbjct: 47 SNQSKESALLFFMLNNFLKSYEVAQARESGD-VILDRYIFSTLAYQTILIGEERVKVIFE 105 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 +L ++ ++PD + + R++ R Sbjct: 106 AL-DVKNNILLPDAIVFVKADAKTINNRIKARGG 138 >gi|319655044|ref|ZP_08009114.1| deoxyguanosine kinase [Bacillus sp. 2_A_57_CT2] gi|317393268|gb|EFV74036.1| deoxyguanosine kinase [Bacillus sp. 2_A_57_CT2] Length = 213 Score = 72.8 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 26/220 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + Q V P E +E+ + Sbjct: 6 FITVEGPIGVGKTSLAKAISEKFQYALLKEIVDENPFLGKFYENI---------EEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEIS 124 E + F R + ++ L + K ++ D + + + Q + +++ + +I Sbjct: 57 TE-MFFLCNRYKQLVDINNHYLAQKKPVVADYHIFKNLIFAQRTLNQNEYQKYLKIYDIL 115 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 + P+ I L+ ++ L R++ R E Y E+ + + R Sbjct: 116 TGDMPKPNVIIYLNASLETLLDRIELRGREIEKNISPLYLEQLSLDYETAMNE----FER 171 Query: 183 NQPDRCHIV--DSAHSFQSVATN-----ILNIVWELVQKR 215 PD ++ + V I + + ++KR Sbjct: 172 QHPD-IPVIRFNGDQ-LDFVKNESDLMHIFDTLSTSLKKR 209 >gi|11498906|ref|NP_070137.1| thymidylate kinase, putative [Archaeoglobus fulgidus DSM 4304] gi|2649268|gb|AAB89936.1| thymidylate kinase, putative [Archaeoglobus fulgidus DSM 4304] Length = 243 Score = 72.8 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 72/211 (34%), Gaps = 33/211 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI +G++GAGK TH ++R + + T P + A+ LL G +F Sbjct: 57 RFIVIDGMDGAGKDTHAEFVRRRYAERGSVIVRTH-PSDSLFGRVAKASLLRRG--KFFH 113 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AI + + + + ++ R+L G + L Sbjct: 114 LMAAIFYFFDVIYSLLR----YYGRAETVIFVRYL-------GGVLYLPERYARVLYRF- 161 Query: 125 VQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V+P T L+ ++ ++RV R +++ + R+ I Sbjct: 162 FRSVLP--TSPYMFYLEAEPEVCMERVARRSESEMF--------ENIEDFRRVRERAFRI 211 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +++ + I I+ EL Sbjct: 212 LKG----WKFINTNRPIEETRREIERILSEL 238 >gi|315659097|ref|ZP_07911962.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590] gi|315495821|gb|EFU84151.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590] Length = 226 Score = 72.8 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 85/221 (38%), Gaps = 27/221 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L V P + E Sbjct: 22 MNKP-FIAIEGPIGVGKSSLAHQLSQTLDYYEEKEIVDENPFLSDFYEDI---------S 71 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ L G ++ D + + + ++S+ + Sbjct: 72 KWSFQTE-MFFLCNRYKQLNDL--KTLQHG--VVSDYHIYKNKIFARNTLNASEFDKFER 126 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ +P+ I LD + + +R+ R ES + E ++ ++ F Sbjct: 127 IYDIITEDLVLPNMIIFLDAELSVLKQRIAQRQRSFES----HIEDDYLLTLQQEYHHFY 182 Query: 179 DIARNQPDRCHIVDSAHSFQSVA-----TNILNIVWELVQK 214 + + Q R +D+ H V +IL + L+ + Sbjct: 183 ETLKAQGARVIQIDTTH-IDFVHNPEDYADILTQIKPLLGE 222 >gi|67590947|ref|XP_665517.1| thymidylate kinase [Cryptosporidium hominis TU502] gi|54656244|gb|EAL35286.1| thymidylate kinase [Cryptosporidium hominis] Length = 165 Score = 72.4 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 16/142 (11%) Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + ++F A R + + N I+ L G ++CDR+ S AY + Sbjct: 7 GKSIKMAPQVSHLLFTANRWE-LNNYIKENLENGIDVVCDRYSFSGIAYSSGAINLDF-- 63 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + PD + L V++GL S R ++ +E ++ R++ Sbjct: 64 -EWCKSREQGLISPDIVVFL--EVNLGLS------STRSGFGVEIYE--NISDQISVRKV 112 Query: 177 FLDIARNQPDRCHIVDSAHSFQ 198 + + ++++ S Sbjct: 113 YQKFS--NYSFWRNINASQSPD 132 >gi|289551637|ref|YP_003472541.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus lugdunensis HKU09-01] gi|289181168|gb|ADC88413.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus lugdunensis HKU09-01] Length = 205 Score = 72.4 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 85/221 (38%), Gaps = 27/221 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L V P + E Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHQLSQTLDYYEEKEIVDENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ L G ++ D + + + ++S+ + Sbjct: 51 KWSFQTE-MFFLCNRYKQLNDL--KTLQHG--VVSDYHIYKNKIFARNTLNASEFDKFER 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ +P+ I LD + + +R+ R ES + E ++ ++ F Sbjct: 106 IYDIITEDLVLPNMIIFLDAELSVLKQRIAQRQRSFES----HIEDNYLLTLQQEYHHFY 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVA-----TNILNIVWELVQK 214 + + Q R +D+ H V +IL + L+ + Sbjct: 162 ETLKAQGARVIQIDTTH-IDFVHNPEDYADILTQIKPLLGE 201 >gi|55962459|emb|CAI11968.1| novel protein similar to mouse thymidylate kinase family LPS-inducible member (Tyki) [Danio rerio] Length = 401 Score = 72.4 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 44/213 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++ GKTT L++ L + P D Sbjct: 216 IVIEGLDATGKTTLTEALRQSLNA----TLLKSPPQCLAPFRQ--------RFDSEPPLI 263 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +A ++ + +L ++ DR+ S+ AY +++L Sbjct: 264 RRAFYALGNYITATHIAKESLRAP--VIVDRYWHSTAAYAIATAVGGR--VENL------ 313 Query: 127 EVMPDCTIIL--------------DLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHE 171 PD + + + + ++R+++R + + E + + + Sbjct: 314 -PKPDSELYVWPEDLLQPDLVLLLTVSPEERVRRLRDRGQDKTTEEA---ELEINQLFRL 369 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 K + + I P C VD++ S Q V + Sbjct: 370 KVEEAYKRI--QNPS-CITVDASPSPQEVLKQV 399 >gi|325964882|ref|YP_004242788.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3] gi|323470969|gb|ADX74654.1| thymidylate kinase [Arthrobacter phenanthrenivorans Sphe3] Length = 201 Score = 72.4 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 31/213 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I GI+G+GK+T L +Q + + A A V + A Sbjct: 1 MLIVLTGIDGSGKSTAAQALVSAVQARGGAALLL----NNHAGRRAMSVFSAKLGIRLPA 56 Query: 65 EAEAIVFAAARLDHVENVIRPALME------GKILLCDRFLDSSYAYQGERDSSQHLFLD 118 A A + + V L +++ DR L A + + + L Sbjct: 57 RA------ADAAETIFRVWNVLLNHLRTSRFDGLVVMDRHLYCQLALRAAKGLPRGRLLP 110 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L D + L++ + +R++ R S ES +D+ + + Sbjct: 111 WLLAALPAP---DAVVHLEVDPRLAHERIKARGSDAES-------LEDLAAFD---DGYR 157 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + P VD++ + + ++ +L Sbjct: 158 RL-PEYPQ-FVTVDASVPAPELVRRLDALISQL 188 >gi|311028948|ref|ZP_07707038.1| deoxyguanosine kinase [Bacillus sp. m3-13] Length = 150 Score = 72.0 bits (176), Expect = 5e-11, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 16/155 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + Q + V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKKIAEEFQYQLLKEIVDENPFLGKFYENI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---LQE 122 E + F R +E++ + L + K ++ D + + + + + + D + + Sbjct: 57 TE-MFFLCNRYKQLEDIDQHHLKQHKPVIADYHILKNLIF--AKRTLKDKQYDKYLRIYD 113 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRES 156 I ++ P+ I L+ +D L R++ R E Sbjct: 114 ILTEDMPRPNVIIYLNASLDTLLTRIEKRGRDIEK 148 >gi|299542076|ref|ZP_07052392.1| hypothetical protein BFZC1_24018 [Lysinibacillus fusiformis ZC1] gi|298725391|gb|EFI66039.1| hypothetical protein BFZC1_24018 [Lysinibacillus fusiformis ZC1] Length = 211 Score = 72.0 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 79/220 (35%), Gaps = 26/220 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EG G GKT+ + V P E +E+ + Sbjct: 5 FVTVEGPIGVGKTSLSKEIAATFNYHLLKEIVDENPFLNKFYENI---------EEWSFQ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124 E + F R + ++ + L K ++ D + + + + ++ + + I Sbjct: 56 TE-MFFLCNRYKQLTDIKKFRLAHAKPVVADYHIFKNLIFAKRTLAPTEYEKYEEIYRIL 114 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + L V+ +KR+ R E DY E+ H + F + Sbjct: 115 TKDMPVPNVVVYLHASVETLMKRIAMRGREFEKMISRDYMEQLVADYHSFI-EHFESM-- 171 Query: 183 NQPDRCHIV--DSAHSFQSVA-----TNILNIVWELVQKR 215 P+ ++ + V ++L I+ + +Q+R Sbjct: 172 -HPE-IPVIRFNGDQ-LDFVKNPNDLNHVLKIIKDTLQQR 208 >gi|150391767|ref|YP_001321816.1| deoxyguanosine kinase [Alkaliphilus metalliredigens QYMF] gi|149951629|gb|ABR50157.1| deoxyguanosine kinase [Alkaliphilus metalliredigens QYMF] Length = 221 Score = 72.0 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 66/174 (37%), Gaps = 14/174 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + FIS EG G GKTT ++L + L V P E + Sbjct: 1 MKN-TFISVEGPIGVGKTTLTNILAKHLDSFALKEIVEDNPYLKSFYENV---------E 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 E+ + E + F R+ +E+V + L G ++ D + + + G + + Sbjct: 51 EYAFQTE-MFFLCNRIKQLEDVQKKYLDRGLSVVSDYNIIKNLVFAGLNLQNGKFQKYRQ 109 Query: 120 LQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171 + I + Q D I L D+ +KR++ R E DY +R + Sbjct: 110 VYAILADQLPQSDIIIYLYGDTDLLMKRIEMRDRPFERNMSRDYIDRLNREYQH 163 >gi|116668624|ref|YP_829557.1| thymidylate kinase [Arthrobacter sp. FB24] gi|116608733|gb|ABK01457.1| thymidylate kinase [Arthrobacter sp. FB24] Length = 206 Score = 72.0 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 67/219 (30%), Gaps = 41/219 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ L I GI+GAGKTT + + R G + Sbjct: 1 MSHPLLIVLTGIDGAGKTTAARAAVEAARLAGGKALLLRNHAGRR------------NMT 48 Query: 61 EFGAEAEAIVFAAARLDHVENVIR-------PALMEG--KILLCDRFLDSSYAYQGERDS 111 ++ + + D +E IR A +++ DR L A + R Sbjct: 49 QWSERSGIHL-NRRVADALETGIRTINVLVSHARARNFSGLVVMDRHLYCQLALRSVRGL 107 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L + PD I D+ + LKR+ R + + + + Sbjct: 108 PPGRLLRW---LLRHLPAPDLVIHFDVSPEQALKRILLRGT----------DTETLEELR 154 Query: 172 KRRQIFLDIARNQPD--RCHIVDSAHSFQSVATNILNIV 208 + + + P+ +D+ + V + + + Sbjct: 155 ALGEAYRAL----PEFAGFVRIDAGGAQDEVLAALTDTI 189 >gi|9631984|ref|NP_048773.1| hypothetical protein PBCV1_A416R [Paramecium bursaria Chlorella virus 1] gi|1620088|gb|AAC96784.1| contains ATP/GTP-binding site motif A; similar to Bacillus subtilus 24.1 kDa protein, corresponds to Swiss-Prot Accession Number P37530 [Paramecium bursaria Chlorella virus 1] Length = 188 Score = 72.0 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 78/217 (35%), Gaps = 37/217 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS +G+ G+GKTT L L+++ + V REP G + + Sbjct: 1 MIISVDGLMGSGKTT----LLDRLEKRGFKVF--REPVGEW--KFLNKFYKNPKKYALAL 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGERDSSQHLFLD 118 + E + + I+ +R ++ + + + + Sbjct: 53 QLEIL--VSFTKYTFTE---------DIVFTERCPQVSHYVFAKM--LSAKGTLTDEEMA 99 Query: 119 SLQEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + PD I L P+D+ +R++ R +Y ER EK I Sbjct: 100 TYKNFYDKMNLWKPDVHIFLKCPIDVCEQRLKRRSDSYTIDT-EYMER-----LEKYYSI 153 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 F + P +D++ + V + +N V + V+ Sbjct: 154 FNKYTNSTP--IKFIDASKNEDEVEEDFMNQVKDFVE 188 >gi|169825644|ref|YP_001695802.1| hypothetical protein Bsph_0030 [Lysinibacillus sphaericus C3-41] gi|168990132|gb|ACA37672.1| Hypothetical yaaG protein [Lysinibacillus sphaericus C3-41] Length = 223 Score = 72.0 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 82/220 (37%), Gaps = 26/220 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EG G GKT+ + V P E +E+ + Sbjct: 17 FVTVEGPIGVGKTSLSKEIAATFNYHLLKEIVDENPFLNKFYENI---------EEWSFQ 67 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124 E + F R + ++ + L K ++ D + + + +S ++ + + +I Sbjct: 68 TE-MFFLCNRYKQLTDIKKFRLAHAKPVVADYHIFKNLIFAKRTLASTEYEKYEEIYKIL 126 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + L V+ +KR+ R E DY E+ + H + F + Sbjct: 127 TKDMPVPNVVVYLHASVETLMKRIAMRGRDFEKMISRDYMEQLVIDYHSFI-EHFE---K 182 Query: 183 NQPDRCHIV--DSAH-----SFQSVATNILNIVWELVQKR 215 P+ ++ + + + +L I+ + +QKR Sbjct: 183 MHPE-IPVIRFNGDQLDFVKNPDDL-NYVLKIIKDTLQKR 220 >gi|170721760|ref|YP_001749448.1| hypothetical protein PputW619_2585 [Pseudomonas putida W619] gi|169759763|gb|ACA73079.1| conserved hypothetical protein [Pseudomonas putida W619] Length = 205 Score = 71.6 bits (175), Expect = 7e-11, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 77/217 (35%), Gaps = 18/217 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 M+ LF+S +G +G GKTT + + + L+ V E P + S Sbjct: 1 MSRSLFVSMDGPKGTGKTTLLEAVTQALRADGLKVIRICERKSDPFRAQTMALVNQFVRS 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D A E FA +R + + P G I+L DR+ S A+ R Sbjct: 61 PSPDLELAVCER--FAQSRAW-ISQQVLPRQPPGSIILIDRWYPSEAAF---RRLIPFPE 114 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L I+ +PD ++ + DI R R S + FE H Q Sbjct: 115 ILRLN-IASNVRVPDLSVGVVTAPDISWARATARTRGLSSTVMHRFEE-----HVACTQA 168 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 F + + + + +++ + +++ Sbjct: 169 FERAVAENG--WLLCRNEGTIEDATLQVVSAIQGVLR 203 >gi|126652943|ref|ZP_01725085.1| Deoxyguanosine kinase [Bacillus sp. B14905] gi|126590273|gb|EAZ84395.1| Deoxyguanosine kinase [Bacillus sp. B14905] Length = 223 Score = 71.2 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 80/220 (36%), Gaps = 26/220 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EG G GKT+ + V P E +E+ + Sbjct: 17 FVTVEGPIGVGKTSLSKEIAATFNYHLLKEIVDENPFLNKFYENI---------EEWSFQ 67 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124 E + F R + ++ + K ++ D + + + +S ++ + + +I Sbjct: 68 TE-MFFLCNRYKQLTDIKKFRFAHAKPVVADYHIFKNLIFAKRTLASTEYEKYEEIYQIL 126 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 ++ +P+ + L V+ +KR+ R E DY E+ H + F + Sbjct: 127 TKDMPVPNVVVYLHASVETLMKRIAMRGRDFEKMISRDYMEQLVTDYHSFI-EHFE---K 182 Query: 183 NQPDRCHIV--DSAH-----SFQSVATNILNIVWELVQKR 215 P+ ++ D + + +L I+ + +QKR Sbjct: 183 MHPE-IPVIRFDGDQLDFVKNPDDL-NYVLKIIKDTLQKR 220 >gi|223042779|ref|ZP_03612827.1| deoxynucleoside kinase family protein [Staphylococcus capitis SK14] gi|314932785|ref|ZP_07840154.1| deoxynucleoside kinase family protein [Staphylococcus caprae C87] gi|222443633|gb|EEE49730.1| deoxynucleoside kinase family protein [Staphylococcus capitis SK14] gi|313654466|gb|EFS18219.1| deoxynucleoside kinase family protein [Staphylococcus caprae C87] Length = 205 Score = 71.2 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 86/223 (38%), Gaps = 27/223 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ +L + L V P + + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLARMLSQTLGYYEEKEIVDENPFLSDFYDDI---------E 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R ++++ AL +G ++ D + + + DS + Sbjct: 51 KWSFQTE-MFFLCNRYKQIQDI--EALEQG--VVSDYHIHKNKIFANNTLDSKEFDKFSR 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +D+ R+ R E E ++ ++ + + Sbjct: 106 IYDILTEDLEMPNMIIFLDADLDVLKARIAKRNRNFEHT----IEDDYLLKLKQDYKAYY 161 Query: 179 DIARNQPDRCHIVDSAHSFQSV-----ATNILNIVWELVQKRV 216 + +N+ +D+ V IL ++ ++ + Sbjct: 162 ESLKNEGANVIRIDTT-EKDFVNNSDDYKEILELIKPMIGDNI 203 >gi|295702256|ref|YP_003595331.1| deoxyguanosine kinase [Bacillus megaterium DSM 319] gi|294799915|gb|ADF36981.1| deoxyguanosine kinase [Bacillus megaterium DSM 319] Length = 211 Score = 71.2 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 22/218 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FIS EG G GKT+ + + Q + V P E +E+ + Sbjct: 6 FISVEGPIGVGKTSLAKEIAQAFQFEILKEIVDENPFLGKFYENI---------NEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSLQEI 123 E + F R +E++ + L K ++ D + + A Q +D ++ + Sbjct: 57 TE-MFFLCNRYKQLEDIQKGFLSYKKPVVADYHIMKNMIFAEQTLKDEQYKKYVQIFHIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + P+ I L+ +D LKR++ R E ++ + +EK F +N Sbjct: 116 TADMPAPNIIIYLNASLDTLLKRIKMRGREIERNIDPHYLARLSDDYEKAMSAFE---QN 172 Query: 184 QPD-RCHIVDSAHSFQSVA-----TNILNIVWELVQKR 215 PD D V IL+ V E + KR Sbjct: 173 NPDVTILRYDGD-EIDFVQNKQHLNRILSEVQESMLKR 209 >gi|326201499|ref|ZP_08191370.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] gi|325988099|gb|EGD48924.1| thymidylate kinase [Clostridium papyrosolvens DSM 2782] Length = 233 Score = 71.2 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 73/188 (38%), Gaps = 15/188 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVD 60 G+ I EGI G+GK+ I+ + L + Y+V + E R ++ + C + Sbjct: 11 QKGVLIVCEGISGSGKSESIAKIYNHLSAQ-YNVQIVEWNSN----EKIRKIVKALCNLK 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +I+ + I PAL +G I++ DR++ ++ RD + Sbjct: 66 MLTSTIYSILQWISFCIDYFTRILPALNKGNIVIADRYVYTAL----TRDIVNGSSVLPG 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDY---FERKDVMIHEKRRQ 175 + + P+ D ++ +R+ R + + + K++ K R Sbjct: 122 KYLCTLVRKPEMLFFYDTNCELCYERILTRGKALFHTNKYIKRNKLLKNKNLYYLMKLRG 181 Query: 176 IFLDIARN 183 ++ I R Sbjct: 182 EYMKILRK 189 >gi|242372783|ref|ZP_04818357.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W1] gi|242349556|gb|EES41157.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W1] Length = 220 Score = 70.8 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 75/196 (38%), Gaps = 21/196 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L V P + + + Sbjct: 16 MNKP-FIAIEGPIGVGKSSLAHKLSQTLNYYEEREIVDENPFLSDFYDDI---------E 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ AL +G ++ D + + + D + Sbjct: 66 KWSFQTE-MFFLCNRYKQIRDL--EALDQG--VVSDYHIHKNKIFASNTLDEKEFDKFSR 120 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +DI R+ R E E ++ +K + + Sbjct: 121 IYDILTEDLEMPNMIIFLDADLDILKSRIAKRNRDFEHT----IEDDYLLTLKKDYKAYY 176 Query: 179 DIARNQPDRCHIVDSA 194 + + + ++D+ Sbjct: 177 ESLKKEGANVILIDTT 192 >gi|213965042|ref|ZP_03393241.1| thymidylate kinase [Corynebacterium amycolatum SK46] gi|213952578|gb|EEB63961.1| thymidylate kinase [Corynebacterium amycolatum SK46] Length = 176 Score = 70.8 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 6/128 (4%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G A A A++FA R + I A E +L+ DR++ S+ AY + + Sbjct: 24 GDTADSAWAMALLFALDRKER-RQAIVDAARENDVLIIDRYVASNAAY-SLARTQDPAIV 81 Query: 118 DSLQEISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +++ + PD + L V + R + R + D +E+ D + E+ Sbjct: 82 EWIEKTEFGDFQLPLPDVQVCLATSVGVAADRARKREASDVQRTRDAYEK-DSGLQERTL 140 Query: 175 QIFLDIAR 182 + A Sbjct: 141 AAYQKFAE 148 >gi|320450934|ref|YP_004203030.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Thermus scotoductus SA-01] gi|320151103|gb|ADW22481.1| deoxyguanosine kinase/deoxyadenosine kinase, subunit [Thermus scotoductus SA-01] Length = 202 Score = 70.8 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 68/194 (35%), Gaps = 23/194 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG GAGKTT LL + + V P + L + Sbjct: 1 MYIAIEGPIGAGKTTLARLLAQRFGAEPLLEVVEENPFLS---------LFYQDRKRYAF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF---LDSLQ 121 + + + RP L G ++ D +L A + + LD + Sbjct: 52 KTQVFFLLSRYRQLSRLRERP-LFGG--VVAD-YLFDKDAIFASLNLEGPEWDLYLDLYR 107 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E+S++ PD T+ L PV + L+R++ R E E D E + + Sbjct: 108 ELSLKLPPPDLTVYLRAPVLVLLERIRKRGRPFE-------EGMDPTYLEALSEAYERHF 160 Query: 182 RNQPDRCHIVDSAH 195 ++++ Sbjct: 161 ARYAHPLLVLEADQ 174 >gi|16077083|ref|NP_387896.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221307824|ref|ZP_03589671.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221312146|ref|ZP_03593951.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317079|ref|ZP_03598373.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. JH642] gi|221321342|ref|ZP_03602636.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. SMY] gi|586860|sp|P37530|DGK_BACSU RecName: Full=Deoxyguanosine kinase; Short=DGUO kinase; Short=dGK gi|467405|dbj|BAA05251.1| unknown [Bacillus subtilis] gi|2632282|emb|CAB11791.1| deoxyguanosine kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 207 Score = 70.8 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 28/223 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ FI+ EG GAGKTT ++L + + V P + + Sbjct: 1 MNTAPFIAIEGPIGAGKTTLATMLSQKFGFPMINEIVEDNPYLDKFYDNIKE-------- 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + E + F R +E+ L +G+ ++ D + + + + L+ Sbjct: 53 -WSFQLE-MFFLCHRYKQLEDTSDHFLKKGQPVIADYHIYKNVIF--AERTLSPHQLEKY 108 Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175 ++I P+ I + + L R++ R E Y E+ +Q Sbjct: 109 KKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEVAIKQ 168 Query: 176 IFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212 + P+ VD S V I V EL+ Sbjct: 169 ----LQEADPELTVLTVDGD-SKDFVLNKSDFERIAAHVKELI 206 >gi|311896881|dbj|BAJ29289.1| hypothetical protein KSE_34820 [Kitasatospora setae KM-6054] Length = 210 Score = 70.4 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 75/220 (34%), Gaps = 31/220 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG+ GKTT + L L + V + +P + F AE + Sbjct: 5 IEGVSCVGKTTLAAQLAPHL---DRPVVIPCYYHASPDPTRL------PAPEPFTAEHQL 55 Query: 69 --IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDSLQEISV 125 I D + AL EG+ ++ DR +D+ A+ + + + Sbjct: 56 ANIAEFLDVEDLRLTLAGQALAEGRDVILDRTVDTLLAHAHAVGRMNGFDCDAQARHLVT 115 Query: 126 QEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD--IA 181 MPD TI+L D+ +R + R + +++R +L +A Sbjct: 116 GRPVAMPDLTIVLTADPDVLARRARLRKGMPTI----FYDRHFSEHFN----AYLAHPLA 167 Query: 182 RNQPDRCHIVDSA-HSFQSVATNILNIV--WELVQKRVSP 218 ++D+ S + L V + Q R SP Sbjct: 168 PA----VALLDATDGSLDDLTAQALGHVHRHQAAQHRPSP 203 >gi|89100958|ref|ZP_01173804.1| deoxyguanosine kinase [Bacillus sp. NRRL B-14911] gi|89084329|gb|EAR63484.1| deoxyguanosine kinase [Bacillus sp. NRRL B-14911] Length = 215 Score = 70.4 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 17/169 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + Q V P + +E+ + Sbjct: 6 FITVEGPIGVGKTSLAKAISEHFQFALLKEIVDENPFLGKFYDNI---------EEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R + ++ L K ++ D + + + + + + Sbjct: 57 TE-MFFLCNRYKQLGDINTDYLANNKAVVADYHILKNLVF--AERTLSPAEFQKYVKIYD 113 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169 I + P+ I L ++ L+R++ R E Y E+ + Sbjct: 114 ILTSDMPRPNVIIYLHASLETLLQRIRLRGREIEKNISPLYLEQLSIDY 162 >gi|291409780|ref|XP_002721181.1| PREDICTED: UMP-CMP kinase 2-like [Oryctolagus cuniculus] Length = 451 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 79/237 (33%), Gaps = 58/237 (24%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P + R + Sbjct: 250 QRGKFQVIAIEGLDATGKTTVTQAVSDALKA----VLLKSPPSC--IGQW-RKIFDDEPT 302 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A + A E+V P ++ DR+ S+ AY + S L Sbjct: 303 IVRRAFYSLGNYIVASEIAKESVKSP-------VIVDRYWHSTAAYAIATEVSGG--LQQ 353 Query: 120 L---QEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESAC 158 L Q D + + ++R+Q R + E Sbjct: 354 LPPAHHPVYQWPE-------DLLKPDLVLLLTVSPEERVRRLQGRGVEKTQEEAELEGNS 406 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +K ++ + + P CH+VD++ S + V +L+++ ++R Sbjct: 407 V---------FRQKVQECYRRM--ENPG-CHVVDASPSREMVLQTVLSLIRNSGERR 451 >gi|221120456|ref|XP_002156620.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 346 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 52/133 (39%), Gaps = 17/133 (12%) Query: 82 VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVD 141 +I+ + G L+ DR+ S A+ + + + + PD +++ ++ Sbjct: 14 LIKEKIANGVTLVVDRYAYSGVAFTSAKGYD----MLWCKNCDIGLPRPDAVYYMNIDIE 69 Query: 142 IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201 S+R + +E D +K ++ F ++ +P +++D+ S + Sbjct: 70 DA--------SVRGDYGCERYEVSD--FQKKVQECFQNL--KEPS-WNVIDARESIDCIH 116 Query: 202 TNILNIVWELVQK 214 + V + + + Sbjct: 117 KTLCESVLKTIGE 129 >gi|312221622|emb|CBY01562.1| hypothetical protein [Leptosphaeria maculans] Length = 97 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 11/98 (11%) Query: 87 LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 L GK ++ DR+ S Y + + L L+ + V PD + LD+ + KR Sbjct: 4 LRAGKTVIVDRYYYSGCVYSAAKQN-PSLSLEWSRHPEVGLPRPDLCVFLDISAEEAAKR 62 Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + +E+K + ++ R++F + + Sbjct: 63 --------GGYGSEKYEKK--EMQDRVRELFEMMMSRE 90 >gi|313112783|ref|ZP_07798430.1| hypothetical protein HMPREF9436_00270 [Faecalibacterium cf. prausnitzii KLE1255] gi|310624853|gb|EFQ08161.1| hypothetical protein HMPREF9436_00270 [Faecalibacterium cf. prausnitzii KLE1255] Length = 224 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 84/238 (35%), Gaps = 45/238 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAARHVL 54 M + ISF G++G+GK+T I L+++ Y V + R G + + +L Sbjct: 1 MKPAM-ISFMGLDGSGKSTSIDYAYEQLKKRGYKVEIVRAAYVIVFLRG--VIKLGKKIL 57 Query: 55 LSCGVDEFGAEAEAIVFA---------AARLDHVENVIRPALME----------GKILLC 95 + D F + +A + + A ++ I L G LL Sbjct: 58 MKKDSDPFSGDYKAYLESLRKNANKGGAYKIFSFLTTIEFKLQIFFKIRLKRFFGTTLLV 117 Query: 96 DRFLDSSYA-YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 DR++ + Y D + +++ PD I + PV++ R Sbjct: 118 DRYIYDNVVTYAANLDLGEEYMEETMNGKWKNAPRPDKIIYIKTPVEVCCSRK------D 171 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + Y E + +EK +++ ++ Q + ++ + E++ Sbjct: 172 DIPDPLYLEIRKPR-YEKVAEMY---------NATVIAGDQDKQKMLDEVMAAIDEVL 219 >gi|296332944|ref|ZP_06875402.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305672713|ref|YP_003864384.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149908|gb|EFG90799.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305410956|gb|ADM36074.1| deoxyguanosine kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 207 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 76/223 (34%), Gaps = 28/223 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ FI+ EG GAGKTT ++L + V P + + Sbjct: 1 MNTAPFIAIEGPIGAGKTTLATMLSQEFGFPMISEIVEDNPYLDKFYDNI---------E 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+ + E + F R +E+ L +G+ ++ D + + + + L+ Sbjct: 52 EWSFQLE-MFFLCHRYKQLEDTSDHFLKKGQPVIADYHIYKNVIF--AERTLSQHQLEKY 108 Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175 ++I P+ I + + L R++ R E Y E+ +Q Sbjct: 109 KKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLIADYEVAIKQ 168 Query: 176 IFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212 + P+ +D S V I V EL+ Sbjct: 169 ----LQEADPELTVLTIDGD-SKDFVLNKSDFERIAAHVKELI 206 >gi|321313683|ref|YP_004205970.1| deoxyguanosine kinase [Bacillus subtilis BSn5] gi|291482385|dbj|BAI83460.1| deoxyguanosine kinase [Bacillus subtilis subsp. natto BEST195] gi|320019957|gb|ADV94943.1| deoxyguanosine kinase [Bacillus subtilis BSn5] Length = 207 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 77/223 (34%), Gaps = 28/223 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ FI+ EG GAGKTT ++L + + V P + + Sbjct: 1 MNTAPFIAIEGPIGAGKTTLATMLSQEFGFPMINEIVEDNPYLDKFYDNI---------E 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+ + E + F R +E+ L +G+ ++ D + + + + L+ Sbjct: 52 EWSFQLE-MFFLCHRYKQLEDTSDHFLKKGQPVIADYHIYKNVIF--AERTLSPHQLEKY 108 Query: 121 QEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175 ++I P+ I + + L R++ R E Y E+ +Q Sbjct: 109 KKIYHLLTDDLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEVAIKQ 168 Query: 176 IFLDIARNQPD-RCHIVDSAHSFQSV-----ATNILNIVWELV 212 + P+ VD S V I V EL+ Sbjct: 169 ----LQEADPELTVLTVDGD-SKDFVLNKSDFERIAAHVKELI 206 >gi|226942414|ref|YP_002797487.1| Thymidylate kinase [Azotobacter vinelandii DJ] gi|226717341|gb|ACO76512.1| Thymidylate kinase [Azotobacter vinelandii DJ] Length = 189 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 56/149 (37%), Gaps = 15/149 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI E ++G GKTT L L PG PA + R + + D A Sbjct: 3 RFIVIESLDGVGKTTLTRNLAAALGG-----IAMSMPG--PAIKPLREPIQAALGDARIA 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A +F A R A G+ ++ DRFL S+ AY R + Sbjct: 56 HA---LFYLAVAAAEGTRARAATDAGRSVVMDRFLASTIAYARARGVDADFD-----ALL 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 PD +++L L D ++R+ R + Sbjct: 108 PALPRPDVSVLLTLDEDERIRRLGARGEM 136 >gi|269962034|ref|ZP_06176388.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269833118|gb|EEZ87223.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 80 Score = 69.7 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV-DEFG 63 FI EG+EGAGK+T I + L+ D+ TREPGGTP AE R ++ ++ Sbjct: 5 FIVVEGLEGAGKSTAIKTVLDTLKAAGIQDIVNTREPGGTPLAEKMRALVKEEHEGEDLK 64 Query: 64 AEAE 67 E Sbjct: 65 DMTE 68 >gi|156186999|gb|ABU55750.1| thymidylate kinase [Spiraea stunt phytoplasma] Length = 88 Score = 69.7 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I L+ L+ + + G + + R++ L+ + Sbjct: 2 KLIVFEGLDGSGKTSLIHALQPQLK---IPHQLYQGLGSSSIGKKIRNLFLN--FQQVDY 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + +I P L ++++ D Sbjct: 57 LTRFYLSLSNMTQIQVELISPQLKNHQLIILD 88 >gi|294496889|ref|YP_003560589.1| deoxyguanosine kinase [Bacillus megaterium QM B1551] gi|294346826|gb|ADE67155.1| deoxyguanosine kinase [Bacillus megaterium QM B1551] Length = 211 Score = 69.7 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 46/218 (21%), Positives = 80/218 (36%), Gaps = 22/218 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FIS EG G GKT+ + + Q + V P + +E+ + Sbjct: 6 FISVEGPIGVGKTSLAKEIAQAFQFEILKEIVDENPFLGKFYKNI---------NEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSLQEI 123 E + F R +E++ + L K ++ D + + A Q +D ++ + Sbjct: 57 TE-MFFLCNRYKQLEDIQKGFLSYKKPVVADYHIMKNMIFAEQTLKDEQYKKYVQIFHIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + P+ I L+ +D LKR++ R E ++ + +EK F +N Sbjct: 116 TADMPAPNIIIYLNASLDTLLKRIKMRGREIERNIDPHYLARLSDDYEKAMTAFE---QN 172 Query: 184 QPD-RCHIVDSAHSFQSVA-----TNILNIVWELVQKR 215 PD D V IL+ V E + KR Sbjct: 173 NPDVTILRYDGD-EIDFVQNKQHLNRILSEVQESMLKR 209 >gi|205371949|ref|ZP_03224768.1| deoxyguanosine kinase [Bacillus coahuilensis m4-4] Length = 213 Score = 69.7 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 12/153 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ L V P + +E+ + Sbjct: 6 FITVEGPIGVGKTSLAKALSDHFHYHLLKEIVDENPFLDKFYDNI---------EEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEIS 124 E + F R +E++ L + K ++ D + + + Q + Q+ + +I Sbjct: 57 TE-MFFLCNRFKQLEDIQNHYLSKDKPIVADYHIFKNLIFAQRTLKNQQYDKYMQIFDIL 115 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRES 156 ++ P+ I L+ +D L R++ R E Sbjct: 116 TKDMPRPNLVIYLNASLDTLLTRIEMRGREFEK 148 >gi|313680444|ref|YP_004058183.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977] gi|313153159|gb|ADR37010.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977] Length = 199 Score = 69.3 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 72/192 (37%), Gaps = 20/192 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG G GKTT L + L+ + V P E F Sbjct: 1 MYIAIEGPIGVGKTTLTRHLAQALEGEALFEVVEENPFLPLFYE-------DPEHYAFKV 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQE- 122 + ++ +R +E++ +P L E + ++ D D + + + + L + Sbjct: 54 QVFFLL---SRYKQLEHLAQPRLFE-RAVVADYLFDKDFIFASLNLEGHEWELYQELYQS 109 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +S + PD TI L P+++ L+R++ R E D E+ + + Sbjct: 110 LSPRIPTPDLTIYLRAPLEVLLERIRRRGRSFERGI-------DPGYLERLTEAYDRHFA 162 Query: 183 NQPDRCHIVDSA 194 R + D+ Sbjct: 163 RYRGRLWVFDNT 174 >gi|317128650|ref|YP_004094932.1| deoxynucleoside kinase [Bacillus cellulosilyticus DSM 2522] gi|315473598|gb|ADU30201.1| deoxynucleoside kinase [Bacillus cellulosilyticus DSM 2522] Length = 216 Score = 69.3 bits (169), Expect = 3e-10, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 13/169 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ ++L + K V P + E E+ + Sbjct: 9 FIAVEGPIGVGKTSLATMLAHYFNYKLLKEIVDENPFLSKFYENI---------AEWSFQ 59 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEIS 124 E + F R +E+ L GK ++ D + + + + H D + I Sbjct: 60 TE-MFFLCNRYKQLEDTYDNNLSRGKAVVSDYHIFKNLLFAKQTLKQDHFDKYDRIYRIL 118 Query: 125 VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171 ++ P+ I L + L R++ R L E A Y ++ H+ Sbjct: 119 TNDLPRPNIIIHLHASLPTLLNRIEQRGRLMEQAIDPKYLQQLSDDYHQ 167 >gi|325066507|ref|ZP_08125180.1| thymidylate kinase [Actinomyces oris K20] Length = 63 Score = 69.3 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 24/43 (55%), Positives = 28/43 (65%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46 GLFISFEG +G GKTT I +L L + D +TREPGGT Sbjct: 21 GLFISFEGGDGVGKTTQIRILADLLTAADVDHILTREPGGTEL 63 >gi|213025801|ref|ZP_03340248.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 58 Score = 69.3 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +D E++ + R +L++A R +D+ +V +I V + VQ++ + Sbjct: 1 MDRIEQESFDFFNRTRARYLELAAQD-SRIRTIDATQPLDAVMRDIRATVTKWVQEQAA 58 >gi|281340989|gb|EFB16573.1| hypothetical protein PANDA_012286 [Ailuropoda melanoleuca] Length = 138 Score = 69.3 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 16/147 (10%) Query: 44 TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 T + L E + ++F+A R + V +I+ L +G L+ DR+ S Sbjct: 8 TEIGKLLSSYL--EKKSEVEDHSVHLLFSANRWEQVP-LIKKKLSQGITLVVDRYAFSGV 64 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 A+ + ++ LD ++ V PD + L L + +R + +E Sbjct: 65 AFTSAK---ENFSLDWCKQPDVGLPKPDLVVFLQLRLAEAARR--------GEFGRERYE 113 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHI 190 + E+ F + ++ + Sbjct: 114 NGN--FQERALHRFHQLMADETLNWKV 138 >gi|291296955|ref|YP_003508353.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279] gi|290471914|gb|ADD29333.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279] Length = 206 Score = 69.3 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 76/211 (36%), Gaps = 18/211 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG+ G GKTT LL L ++ V P L +G Sbjct: 1 MYIAIEGVIGVGKTTLARLLAERLGAESLLEVVEENPFLP---------LFYQDPVRYGF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122 + + F +R + + +P+L G ++ D D + S L D + Sbjct: 52 KVQVF-FLLSRYKQLLPLAQPSLFTGG-VVADYLFDKDAIFAAMNLSGAEWDLYNDLYRS 109 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF---LD 179 ++ + PD TI L P+ + L+R++ R + E + + +E + L Sbjct: 110 LAPKIPTPDLTIYLRAPLPVILERIRRRGRVFEKQMEPEYLARLHEFYEHHFATYPHALW 169 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 Q +++ V + + + Sbjct: 170 TLETQDLNFAELEADQ--DWVVRQVQERLAQ 198 >gi|149182702|ref|ZP_01861169.1| Deoxyguanosine kinase [Bacillus sp. SG-1] gi|148849612|gb|EDL63795.1| Deoxyguanosine kinase [Bacillus sp. SG-1] Length = 213 Score = 69.3 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 17/175 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + V P + DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKAISDHFNYHLLKEIVDENPFLDKFYDNI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R +E++ + + K ++ D + + + + ++ D ++ + Sbjct: 57 TE-MFFLCNRYKQLEDIETHFISQNKPVVADYHILKNLIF--AERTLKNKQFDKYLNIYQ 113 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175 I ++ +P+ I L+ +D L+R+ R E Y E+ + +Q Sbjct: 114 ILTEDMPVPNVIIYLNASLDTLLQRIAMRGREFEKKISPLYLEQLSMDYERHMQQ 168 >gi|254427963|ref|ZP_05041670.1| Deoxynucleoside kinase subfamily, putative [Alcanivorax sp. DG881] gi|196194132|gb|EDX89091.1| Deoxynucleoside kinase subfamily, putative [Alcanivorax sp. DG881] Length = 230 Score = 68.9 bits (168), Expect = 4e-10, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 79/225 (35%), Gaps = 42/225 (18%) Query: 5 LFISFEGIEGAGKTTHISLLK------RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 FI+ EG GAGKT+ L + L+R + + +TR Sbjct: 21 RFIAVEGPIGAGKTSLAKRLAMTFGYDQLLERADDNPFLTRFY---------------QD 65 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFL 117 + + E + F R D + V + L G + D +D + + Q D + Sbjct: 66 PARYALQTE-LFFLFQRADQLRQVQQQDLFAGPR-IADFLIDKNRLFAQVTLDEDEFELY 123 Query: 118 DSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEK 172 ++ + ++V PD I L P + +R+ +R + E LD Sbjct: 124 RNVDDHLTVDAPRPDLVIYLQAPPQVLRQRIGHRGNDFEQGIASDYLDKLSNAYTEFFH- 182 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVA--TNILNIVWELVQKR 215 F D A IV++A V + ++ EL+ R Sbjct: 183 ----FYDRAPL-----LIVNAA-EIDLVNHDRDYQQLISELLDIR 217 >gi|289209205|ref|YP_003461271.1| deoxynucleoside kinase [Thioalkalivibrio sp. K90mix] gi|288944836|gb|ADC72535.1| deoxynucleoside kinase [Thioalkalivibrio sp. K90mix] Length = 216 Score = 68.9 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 19/172 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EG G GK++ LL L+ + P P E + A Sbjct: 8 FVAVEGPIGVGKSSLARLLSEHLRAEGI----FEAPDENPFLERFYQ------EPDKHAL 57 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A + F R+ + V + L E + + + D D +A ++ + + Sbjct: 58 ATQLHFLVQRVRQLTPVSQKGLFEQRHVADYVMD--KDPLFAELNLHPDELEIYREMFRH 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNR----YSLRESACLDYFERKDVMIH 170 + PD I L PV++ L R++ R E+ L+ Sbjct: 116 LRAGLPRPDLVIYLQAPVEVLLDRIRQRARPYERHIEAHYLERLNAAYAEFF 167 >gi|281212513|gb|EFA86673.1| deoxyguanosine kinase [Polysphondylium pallidum PN500] Length = 279 Score = 68.9 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 79/230 (34%), Gaps = 29/230 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I EG AGKT + L L K + T P E + L + Sbjct: 23 KNAKIIILEGNISAGKTFLSTRLGELLNYKVFLEPTTTNPYLQSFYENPKKYALDMQLWL 82 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL- 120 + + A + +L+ ++ DR + S + + + D Sbjct: 83 LNQRFKTYLLA----------LEYSLVNDSGVVLDRSVFSDWVFAENCRKEGLISSDGFT 132 Query: 121 ------QEISVQEVMPDCTIILDLPVDIGLKRVQ--NRYSLRESACLDYFERKDVMIHEK 172 ++ Q +P+ T+ LD+ + L R+Q + +S L Y + D Sbjct: 133 QYTTIRNKMISQIPIPNITVYLDVTPEQCLNRIQTLRKREFEQSIPLSYLQGLDGCY--- 189 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 + FL+ +++ VD + I I+ E+ R PLS K Sbjct: 190 --KSFLEEIKSKGSNVVTVDWSK-----FAEIDTIIKEIKNDRSLPLSEK 232 >gi|307297649|ref|ZP_07577455.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916909|gb|EFN47291.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2] Length = 205 Score = 68.5 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 33/223 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG +IS EG+ G GKTT + LL + V P E + + Sbjct: 7 SGKYISVEGVIGVGKTTLVKLLSQKYTMPVVLEVVEENPFLAHFYEDI---------ERW 57 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG----ERDSSQHLFLD 118 + + + F +R D NV + A +G+ ++ D YA+ + + L Sbjct: 58 AFQTQ-LFFLISRFDQQSNV-KKAASQGQGVISD------YAFMKDHLFASLTLKGEQLK 109 Query: 119 SLQEISV----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++I Q + PD I L +D +KR+ R E +R + + Sbjct: 110 LYEKIFSVLKDQVLYPDLIIYLYADIDTLMKRIALRDRPFER----RMDRTYIAMLSDTY 165 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVAT-NILNIVWELVQKRV 216 + + +A R +D++ S V + LN+V+ ++ + Sbjct: 166 EKY--MAAFSESRVLRIDTS-SIDFVRNVDDLNMVFSRIEANL 205 >gi|302531819|ref|ZP_07284161.1| hypothetical protein SSMG_08201 [Streptomyces sp. AA4] gi|302440714|gb|EFL12530.1| hypothetical protein SSMG_08201 [Streptomyces sp. AA4] Length = 250 Score = 68.5 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 74/236 (31%), Gaps = 38/236 (16%) Query: 3 SGLFISFEGI--------EGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G+ I+ EGI + L L + V E +L Sbjct: 19 RGVLITVEGIWGTGKTTT--------ATALGERLTAAGFSTRVMHYGPRHGVVERLSDML 70 Query: 55 ----------LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 L A + ++ + + RP L E +++ D + S A Sbjct: 71 DTAPLRRRDGLGGYAAAHHATVDVLLRLCRESYNHRVLYRPVLAEHDVVVIDHGVYSKLA 130 Query: 105 YQGER------DSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 Y D L L+ ++ ++ + PD + LD+P + +R R S Sbjct: 131 YALAVLCEQHPDLDPMLLLEQVRAVAAPWFLHPDVALWLDMPWPLARERAIARGRGGGSP 190 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWELV 212 + ++ + + +A PDR + + SV I ++ ++ Sbjct: 191 GS----VERLLFLPRYSHAYRLLANALPDRIRRIRVGTRTTPSVLAEIDELLSPVL 242 >gi|293376814|ref|ZP_06623034.1| deoxynucleoside kinase [Turicibacter sanguinis PC909] gi|325845378|ref|ZP_08168677.1| deoxyguanosine kinase [Turicibacter sp. HGF1] gi|292644566|gb|EFF62656.1| deoxynucleoside kinase [Turicibacter sanguinis PC909] gi|325488593|gb|EGC91003.1| deoxyguanosine kinase [Turicibacter sp. HGF1] Length = 211 Score = 68.5 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 79/227 (34%), Gaps = 34/227 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N FI+ EG G GKT+ +LL + V P + D Sbjct: 3 NKPYFIAIEGPIGIGKTSLATLLSKHYNYHLLKEIVYENPFLDKFYDDI---------DS 53 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + E + F R + ++ + L K ++ D L + + S L +++ Sbjct: 54 WAFQTE-MFFLTNRYKQLTDIQKDFLDNQKSVVSDYHLFKNVIF-----SKMTLDVNNFN 107 Query: 122 E-------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173 + + P+ II++ ++ +KR++ R E +Y + HE Sbjct: 108 KYQKIYHILEEDLPKPNVIIIVNATLETIMKRIKMRNRHFEQNIDPNYLQTLIDSYHE-- 165 Query: 174 RQIFLDIARNQPDRCHIVDSAHS-FQSV-----ATNILNIVWELVQK 214 + + + + +++ V ++ + E++ + Sbjct: 166 ---YTALLKENHEEIKVIELNGDELDYVNNPKHLQQVIKKIDEMIGQ 209 >gi|225719270|gb|ACO15481.1| Deoxynucleoside kinase [Caligus clemensi] Length = 287 Score = 68.5 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 50/236 (21%), Positives = 84/236 (35%), Gaps = 40/236 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGV 59 N I+ EGI G GK+T +S +K + DV EP +L + Sbjct: 61 NRPFVINVEGIVGTGKSTFLSYMKEY---PYMDVLP--EPVNQWTNLNGTDLLGLVFENP 115 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDS----- 111 + E+ V +H+ RP G I + +R S+ +A Q Sbjct: 116 ARWSMTQESYVLLTLTQEHL----RPY---GIIKIMERSPHSAQNVFARQFHEAGQMTEV 168 Query: 112 ---SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER--- 164 + D L + ++ D TI L L ++ KRV R E LD+ +R Sbjct: 169 EFNVLQAWYDFLND--KMDLRSDLTIYLRLDPEVAYKRVLERGRSEEKKLSLDFLQRLHR 226 Query: 165 --KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 D ++H FL D ++D++ + I + + + K + Sbjct: 227 FHDDWLMHRNT-TSFL-----PSDNILVLDTSRPLEE-MERIYKHLGKWIWKSIPK 275 >gi|156186981|gb|ABU55736.1| thymidylate kinase [Malaysian periwinkle yellows phytoplasma] Length = 99 Score = 68.1 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 5/92 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I+ L+ L+ + + G + + R + L+ + Sbjct: 13 KLIVFEGLDGSGKTSLINSLQPHLKN---PYQLYQGLGSSSLGKEIRGLFLN--FQQVDY 67 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + A +I L ++++ D Sbjct: 68 LTRFYLSLANMAQIQAELIVSQLKNNQLIILD 99 >gi|158317246|ref|YP_001509754.1| thymidylate kinase-like protein [Frankia sp. EAN1pec] gi|158112651|gb|ABW14848.1| Thymidylate kinase-like protein [Frankia sp. EAN1pec] Length = 226 Score = 68.1 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 21/210 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 L ++ EG++GAGKTT I L+ L+ R V E A +L V Sbjct: 7 LLVAVEGVDGAGKTTLIRGLETVLRPLRGTRPARVCVEIF--RAIAEPDDTVLHQAVIPG 64 Query: 63 GAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A + +A RP L L DR++ SS + G +L+ + Sbjct: 65 PVRRLAHLIELSAQLRYRTGPDGRPDL------LFDRWIQSSEVHCGPYGEQHRPWLEHM 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH-EKRRQIFLD 179 +++ PD + L +P + +R+ R R A F + H ++ + Sbjct: 119 EDL---LPRPDPLLWLRVPPALAYERMVARGDRRTRA----FTPAALRAHLVEQADGYEK 171 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209 I D +D S + + + + Sbjct: 172 IMAQA-DNVVELDGTQSRERLLDQAASAIE 200 >gi|295402715|ref|ZP_06812657.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93] gi|294975246|gb|EFG50882.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93] Length = 211 Score = 68.1 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%) Query: 4 GL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ FI+ EG G GKT+ + V P E +E Sbjct: 2 GMVPFIAIEGPIGVGKTSLAKAISEHFHYHLVKEIVDENPFLGKFYENI---------EE 52 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH---LFLD 118 + + E + F R +E + R L + ++ D + + + + + + Sbjct: 53 WSFQTE-MFFLCHRYKQLEEIDRDFLQRQQPVVTDYHIMKNLIF--AKRTLKIHHYKKYT 109 Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +I + P+ I L ++ L R+Q R E Sbjct: 110 KIYDILTDGLPQPNMIIYLHASLETLLTRIQQRGRDFEKR 149 >gi|312109166|ref|YP_003987482.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1] gi|311214267|gb|ADP72871.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1] Length = 211 Score = 68.1 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 18/160 (11%) Query: 4 GL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ FI+ EG G GKT+ + V P E +E Sbjct: 2 GMVPFIAIEGPIGVGKTSLAKAISEHFHYHLVKEIVDENPFLGKFYENI---------EE 52 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH---LFLD 118 + + E + F R +E + R L + ++ D + + + + + + Sbjct: 53 WSFQTE-MFFLCHRYKQLEEIDRDFLQRQQPVVTDYHIMKNLIF--AKRTLKIHHYKKYT 109 Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +I + P+ I L ++ L R+Q R E Sbjct: 110 KIYDILTDGLPQPNMIIYLHASLETLLTRIQQRGRDFEKR 149 >gi|301771640|ref|XP_002921240.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Ailuropoda melanoleuca] Length = 265 Score = 68.1 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 69/222 (31%), Gaps = 40/222 (18%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P Sbjct: 66 QKGKFPVIAIEGLDATGKTTVTQSVSDSLKA----VLLKSPPACISQWRKI--------F 113 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLD 118 D+ ++ + + + ++ DR+ S+ Y + + L Sbjct: 114 DDEPTIIRRAFYSLGNYIVASEIAKESSKSP--VIVDRYWHSTATYAIATEVTGGLQHLP 171 Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDV 167 Q D + + + R++ R R + E V Sbjct: 172 PAHHPIYQWPR-------DLLKPDLVLLLTVSPEERMHRIEGRGMERTREEAE-LEANSV 223 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S + V +L+++ Sbjct: 224 -FRQKVEVSYQRM--ENPG-CHVVDASPSREKVLQMVLSVIQ 261 >gi|189210088|ref|XP_001941376.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977469|gb|EDU44095.1| thymidylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 136 Score = 67.7 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 12/100 (12%) Query: 96 DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 DR+ S Y + + L+ + + PD I LD+ + KR Sbjct: 42 DRYYYSGCVYSAAKQNPNMS-LEWCRNPELGLPRPDLCIFLDISAEDAAKR--------G 92 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCHIVDSA 194 + +E+KD+ ++ R +F + + + + +D+ Sbjct: 93 GYGAEKYEKKDM--QDRVRVLFETLMQRKEGEDFVRIDAG 130 >gi|155371404|ref|YP_001426938.1| hypothetical protein ATCV1_Z457L [Acanthocystis turfacea Chlorella virus 1] gi|155124724|gb|ABT16591.1| hypothetical protein ATCV1_Z457L [Acanthocystis turfacea Chlorella virus 1] Length = 188 Score = 67.7 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 72/208 (34%), Gaps = 23/208 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS EG+ G GK+T ++ LK + + V EP + + Sbjct: 4 ISIEGLMGTGKSTVLAALKE----RGFKVVT--EPVEKWT--FLQKFYDDPRKYSLALQI 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + ++ A + + R++ ++ + + + S ++ Sbjct: 56 QILLTFA--EQEFPEDEVVFVERSPAV--SRYVFANMLRSEGLMTDEAKNVYSQLYTKLE 111 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 PD I LD PVD LKR ++R R+ + EK IF Sbjct: 112 LWKPDGYIFLDAPVDTCLKRQESRGDSYN------ITRQYMTNLEKYYNIFFKYNTRD-- 163 Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214 IVDS + V ++L V + +K Sbjct: 164 ---IVDSNRPVEDVVADVLLAVERMKKK 188 >gi|258650987|ref|YP_003200143.1| major facilitator superfamily protein [Nakamurella multipartita DSM 44233] gi|258554212|gb|ACV77154.1| major facilitator superfamily MFS_1 [Nakamurella multipartita DSM 44233] Length = 725 Score = 67.7 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 17/136 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGV 59 ++G I+ EG + A ++ +++ LQ Y V REP T + A Sbjct: 469 HAGALIAVEGTDAAATADYLKSIEQHLQETGYLTCVVSRREPSPTVRSAAV--------- 519 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLD 118 A+A+ +A + + + PAL +G ++LCD F+D Y+ L Sbjct: 520 ---DPLADALRTSATLAELMATQVGPALEDGAVVLCDGFMDEFIVRYRTLGLVEDDLSRV 576 Query: 119 SLQEISVQEVMPDCTI 134 ++ ++ + PD T+ Sbjct: 577 AV--WAISGLKPDLTV 590 >gi|39939030|ref|NP_950796.1| hypothetical protein PAM_544 [Onion yellows phytoplasma OY-M] gi|39722139|dbj|BAD04629.1| hypothetical protein [Onion yellows phytoplasma OY-M] Length = 126 Score = 67.7 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 9/119 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG G GKT+ I+ L+ L+ + + G + + R + L+ + Sbjct: 3 KLIVFEGHSGRGKTSLINSLRPHLKN---PYQLYQGLGSSSLGKEIRGLFLN--FQQVDY 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A + + ++++ DR+L S+YAYQ + L L++I Sbjct: 58 LTRFYLSLANMSQIQAELFK----NHQLIILDRWLPSTYAYQLFPFFKEKKQLLPLKKI 112 >gi|152973868|ref|YP_001373385.1| deoxynucleoside kinase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022620|gb|ABS20390.1| deoxynucleoside kinase [Bacillus cytotoxicus NVH 391-98] Length = 211 Score = 67.7 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E +E+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------EEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ + L + K ++ D + + + +D +L + + Sbjct: 57 TE-MFFLCNRYKQLEDINKKYLNQHKPVVADYHIFKNLIFASRTLKDVQYEKYLRIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|297607687|ref|NP_001060418.2| Os07g0639900 [Oryza sativa Japonica Group] gi|255678005|dbj|BAF22332.2| Os07g0639900 [Oryza sativa Japonica Group] Length = 131 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDE 61 G I EG++ +GK++ + L FLQ K R P GT + L E Sbjct: 50 RGALIVLEGLDRSGKSSQCARLLSFLQGKGCQAEGWRFPDRGTSVGQMISAYL--ANESE 107 Query: 62 FGAEAEAIVFAAARLD 77 ++F+A R + Sbjct: 108 LDDRTIHLLFSANRWE 123 >gi|166796829|gb|AAI59429.1| Dtymk protein [Rattus norvegicus] Length = 124 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L L + + R P + L + Sbjct: 4 RRGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTE- 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEG 90 + ++F+A R + V +I+ L +G Sbjct: 63 LEDHSVHLLFSANRWEQVP-LIKAKLNQG 90 >gi|242241896|ref|ZP_04796341.1| possible deoxyadenosine kinase [Staphylococcus epidermidis W23144] gi|251809980|ref|ZP_04824453.1| possible deoxyadenosine kinase [Staphylococcus epidermidis BCM-HMP0060] gi|242234674|gb|EES36986.1| possible deoxyadenosine kinase [Staphylococcus epidermidis W23144] gi|251806523|gb|EES59180.1| possible deoxyadenosine kinase [Staphylococcus epidermidis BCM-HMP0060] Length = 232 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 85/221 (38%), Gaps = 27/221 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + V P + + + Sbjct: 28 MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 77 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ +L +G ++ D + + + D+ + Sbjct: 78 KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 132 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +D+ R+ R ES E ++ +K + Sbjct: 133 IFDILTEDIEMPNTIIFLDADLDVLKSRIAQRNRSFESQ----IEDDYLLTLKKDYLAYY 188 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214 + +N +D++ V + ILN+V ++ + Sbjct: 189 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 228 >gi|110639273|ref|YP_679482.1| thymidylate kinase [Cytophaga hutchinsonii ATCC 33406] gi|110281954|gb|ABG60140.1| conserved hypothetical protein; possible thymidylate kinase [Cytophaga hutchinsonii ATCC 33406] Length = 896 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 54/165 (32%), Gaps = 25/165 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN G+ I+ G++GAGK+T I LK Q+ V V R P+ Sbjct: 683 MNKGVIITVSGVDGAGKSTIIEDLKSSFVQKFRKKVVVLR---HRPSIFPILSAWKHGKK 739 Query: 60 DEFGAEAEAI---------VFAAARLDHVEN--------VIRPALMEGKILLCDRFLDSS 102 AE + + + R + V ++ G I++ DR+ Sbjct: 740 KAEAMAAERLPRQGTNDSKLSSLFRFGYYYTDYLFGQVYVYVKYVLRGYIVIYDRYYFDF 799 Query: 103 YAYQ-GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + L + P I+L ++ LKR Sbjct: 800 IGDSKRSNLKLNAKVVTWLYKFIY---KPKLNILLYASPEVILKR 841 >gi|239825600|ref|YP_002948224.1| deoxynucleoside kinase [Geobacillus sp. WCH70] gi|239805893|gb|ACS22958.1| deoxynucleoside kinase [Geobacillus sp. WCH70] Length = 212 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 18/160 (11%) Query: 4 GL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ FI+ EG G GKT+ + + V P E +E Sbjct: 2 GMVPFIAVEGPIGVGKTSLAKAISEHFRYHLVKEIVDENPFLGKFYENI---------EE 52 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--- 118 + + E + F R +E + R L + K ++ D + + + + + + Sbjct: 53 WSFQTE-MFFLCHRYKQLEEIDRNFLQQKKPVVADYHIMKNVIF--AKRTLKEHHYKKYI 109 Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +I + P+ I L ++ L R+ R E Sbjct: 110 KIYDILTDGLPQPNMIIYLHASLETLLTRIHQRGRDFEKR 149 >gi|125775535|ref|XP_001358975.1| GA19526 [Drosophila pseudoobscura pseudoobscura] gi|54638716|gb|EAL28118.1| GA19526 [Drosophila pseudoobscura pseudoobscura] Length = 408 Score = 67.0 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 32/228 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------------VTREPGGTPAAEAA 50 I EG +GKT L L + Y + E + + Sbjct: 86 ICVEGPIASGKTKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPELPPSCRSYDI 145 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 R+ L D A+ + ++ R + ++ G+ ++ +R S + + Sbjct: 146 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHIFSTGQGVVLERSPYSDFVFMETMF 203 Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 QG + +++ ++ E+ P I LDLPVD KR++ R E + E Sbjct: 204 RQGYLSRGARSVYNEIRQNTIGELLKPHLVIYLDLPVDAVQKRIKARNVEHEVKSKVFSE 263 Query: 164 R--KDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 +D+ I K Q +L N + I D + + V +I I Sbjct: 264 AYLRDMEILYK--QQYLKDIANHAE-LLIYDWTADGETEVVVEDIERI 308 >gi|94984210|ref|YP_603574.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300] gi|94554491|gb|ABF44405.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300] Length = 205 Score = 67.0 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 68/200 (34%), Gaps = 34/200 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG G GKT+ L N +V P EA Sbjct: 1 MYLVVEGPIGVGKTSLAGRLAARYGAALNLEVVE-ENPFLARFYEA-------------- 45 Query: 64 AEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLF 116 E A F +R + + +P L G ++ D +L D +A +D+ L+ Sbjct: 46 PETYAFQVQVFFLLSRFKQLSKLAQPGLWSGN-VVSD-YLFDKDFIFAAMNLKDAEFALY 103 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQ 175 D +S + PD I L ++ L R++ R FER + Sbjct: 104 EDLYAHLSPRLPTPDLVIYLRAEPELLLARIEQRGRP--------FERAMQADYLRELTA 155 Query: 176 IFLDIARNQPDRCHIVDSAH 195 + R P VD++H Sbjct: 156 RYDAYFRTYPGHVLTVDASH 175 >gi|195144468|ref|XP_002013218.1| GL24009 [Drosophila persimilis] gi|194102161|gb|EDW24204.1| GL24009 [Drosophila persimilis] Length = 408 Score = 67.0 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 81/228 (35%), Gaps = 32/228 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------------VTREPGGTPAAEAA 50 I EG +GKT L L + Y + E + + Sbjct: 86 ICVEGPIASGKTKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPELPPSCRSYDI 145 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 R+ L D A+ + ++ R + ++ G+ ++ +R S + + Sbjct: 146 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHIFSTGQGVVLERSPYSDFVFMETMF 203 Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 QG + +++ ++ E+ P I LDLPVD KR++ R E + E Sbjct: 204 RQGYLSRGARSVYNEIRQNTIGELLKPHLVIYLDLPVDAVQKRIKARNVEHEVKSTVFSE 263 Query: 164 R--KDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 +D+ I K Q +L N + I D + + V +I I Sbjct: 264 AYLRDMEILYK--QQYLKDIANHAE-LLIYDWTADGETEVVVEDIERI 308 >gi|119478380|ref|ZP_01618388.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143] gi|119448589|gb|EAW29835.1| deoxynucleoside kinase [marine gamma proteobacterium HTCC2143] Length = 226 Score = 67.0 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 67/183 (36%), Gaps = 40/183 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EG G GKTT L + + P E + A Sbjct: 19 RFIAIEGAIGVGKTTLARQLADTFNYQ----TLLENAEQNPFLERFYQ------NQKHAA 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKI---L-LCDRFL---DSSYAYQGERDSSQHLFL 117 A + F R +E+ L +G I + + D FL D +A Q D+ + Sbjct: 69 LATQLFFLFQRSQQIED-----LRQGDIFEPVRVSD-FLIDKDKLFA-QLNLDADEFQLY 121 Query: 118 DSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D + Q++++ PD I L VD+ L R+QNR V ++ + Sbjct: 122 DKVFQQLTIDAPKPDLVIYLQASVDVLLARIQNR---------------GVEFEQRISRN 166 Query: 177 FLD 179 +L+ Sbjct: 167 YLE 169 >gi|300717314|ref|YP_003742117.1| Conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299063150|emb|CAX60270.1| Conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 205 Score = 67.0 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 58/181 (32%), Gaps = 25/181 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59 MN LF+S +G +G GKTT + + + L+ N V + + E V Sbjct: 1 MNRPLFVSLDGPKGVGKTTLLEAVTQVLRADNKKVIRLCEKKSDPWRKETMALVNRFARD 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E E A + + G I+L DR+ S A+ R + Sbjct: 61 PAMDLEREICQRFADSRAWISRHVLAKQPAGSIILMDRWYPSDAAF---RRMVPFAEILQ 117 Query: 120 LQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS----------LRESACLDYFER 164 L + PD T +I R R AC + FER Sbjct: 118 LN-LERNVRTPDLHVGVAT-----APEISWARAAARTRGLSSTVIHKLDDHVACTEAFER 171 Query: 165 K 165 + Sbjct: 172 E 172 >gi|224475713|ref|YP_002633319.1| putative deoxynucleoside kinase [Staphylococcus carnosus subsp. carnosus TM300] gi|222420320|emb|CAL27134.1| putative deoxynucleoside kinase [Staphylococcus carnosus subsp. carnosus TM300] Length = 205 Score = 66.6 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 37/224 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN +I+ EG G GK+T L LQ V P + E Sbjct: 1 MNQP-YIAIEGPIGVGKSTLAHYLSETLQYHEAQEIVDENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118 + + E + F R V+++ + + G ++ D + + +A Q D+ F Sbjct: 51 TWSFQTE-MFFLCNRYKQVQDLEQQS--SG--IVSDYHIFKNKIFARQTLTDTEFDKFSR 105 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ +MP+ I LD +++ +R+ R E D +Q + Sbjct: 106 IYNILTEDLMMPNVVIFLDADLEVLKQRIAKRNRSFEHQIED-------DYLLNLKQAYW 158 Query: 179 DI-----ARNQPDRCHIVDSAHSFQSV-----ATNILNIVWELV 212 + A+ + + +D+ V ILNIV ++ Sbjct: 159 EFYQSLKAQGKKAKW--IDTT-ELDFVNHPDDYAQILNIVQTMI 199 >gi|293367939|ref|ZP_06614577.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W2(grey)] gi|291317968|gb|EFE58376.1| deoxynucleoside kinase [Staphylococcus epidermidis M23864:W2(grey)] Length = 232 Score = 66.6 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 86/221 (38%), Gaps = 27/221 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + V P + + + Sbjct: 28 MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 77 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ +L +G ++ D + + + D+ + Sbjct: 78 KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 132 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +++ R+ R ES + E ++ +K + Sbjct: 133 IFDILTEDIEMPNTIIFLDADLNVLKSRIAQRNRSFES----HIEDDYLLTLKKDYLAYY 188 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214 + +N +D++ V + ILN+V ++ + Sbjct: 189 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 228 >gi|76664708|emb|CAJ17794.1| thymidylate kinase [Candidatus Phytoplasma solani] Length = 68 Score = 66.6 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 2/66 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I +KR L+ + +V V R G + E+ R L+ ++ Sbjct: 2 KLIIFEGLDGSGKTSLIKSVKRELKEQGKEVIVIRGLGSSTIGESIRETFLT--HNKLHN 59 Query: 65 EAEAIV 70 + Sbjct: 60 LTRYFL 65 >gi|154331269|ref|XP_001561453.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134058770|emb|CAM36440.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 272 Score = 66.6 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 28/180 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++G GKT L L T P E R +E A A Sbjct: 68 IVVEGLDGTGKTLITRTLAEKLSGM---AVSTPPPQFAEVRETFRS------QEEVVARA 118 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123 ++AA E+++ A + +++ DR+ S+ A + D++ Sbjct: 119 ---FYSAANYIAAEDIL--AASQSAVVVVDRWWCSTCAMALANAHNYDSLPPSGDAVYRW 173 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR----QIFLD 179 PD +L + + + R++ R FE + + + R + + Sbjct: 174 PEDLPAPDAGFLLCVDEAVRVARIRKRAPED-------FEEQRLSSQSEMRRVAMEAYRR 226 >gi|304394866|ref|ZP_07376750.1| conserved hypothetical protein [Pantoea sp. aB] gi|304357119|gb|EFM21482.1| conserved hypothetical protein [Pantoea sp. aB] Length = 202 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 59/172 (34%), Gaps = 21/172 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 MN LF++ +G +G GKTT + + + L+ N V E P + + Sbjct: 1 MNRQLFVTLDGPKGTGKTTLLESITQVLRADNRKVIRLSEQKSDPFRAESMALVNRLARD 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 VD E FA +R + + E I+L DR+ S A+ R Sbjct: 61 PSVDLEREICER--FALSRAW-ISQNVLTKQPENCIILMDRWYPSDAAF---RRMVPFAE 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + L I PD T ++ +R R S + E Sbjct: 115 IVQLN-IEHNVRAPDLHVGVVT-----APEVSWERAAARSRGLGSTVIHRLE 160 >gi|218132360|ref|ZP_03461164.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC 43243] gi|217992698|gb|EEC58700.1| hypothetical protein BACPEC_00219 [Bacteroides pectinophilus ATCC 43243] Length = 235 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 67/184 (36%), Gaps = 40/184 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL--------------------------------QRKN 32 + ISF G +GAGKTTHI LLK+ + Q + Sbjct: 1 MIISFTGCDGAGKTTHIDLLKKRICNSCKLSGINLLDITNGVLVYENIRDIDLIYKQLEK 60 Query: 33 YDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAIVFAAARLDH---VENVIRPALM 88 YDV VTR + E R + L +E V + D E+VI Sbjct: 61 YDVIVTRFYMKSKLCNEEQRKIRLGLDSVFNNSERIRKVLDCVKTDSDIWREHVISKLHE 120 Query: 89 EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148 KI++ DR+ AY S +L L +++ + PD + L D +R Sbjct: 121 RNKIIIVDRYYYDEVAY----RSMYNLGLYEVEQYFCDAIKPDLSYALLASFDEIRQRNN 176 Query: 149 NRYS 152 NR Sbjct: 177 NRED 180 >gi|27467244|ref|NP_763881.1| deoxypurine kinase [Staphylococcus epidermidis ATCC 12228] gi|27314787|gb|AAO03923.1|AE016745_22 deoxypurine kinase [Staphylococcus epidermidis ATCC 12228] gi|329734691|gb|EGG70998.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU028] Length = 205 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 86/221 (38%), Gaps = 27/221 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + V P + + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ +L +G ++ D + + + D+ + Sbjct: 51 KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +D+ R+ R ES + E ++ +K + Sbjct: 106 IFDILTEDIEMPNTIIFLDADLDVLKSRIAQRNRSFES----HIEDDYLLTLKKDYLAYY 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214 + +N +D++ V + ILN+V ++ + Sbjct: 162 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 201 >gi|238752985|ref|ZP_04614445.1| Thymidylate kinase [Yersinia rohdei ATCC 43380] gi|238708807|gb|EEQ01065.1| Thymidylate kinase [Yersinia rohdei ATCC 43380] Length = 224 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 60/172 (34%), Gaps = 21/172 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 M+ LF+S +G +GAGKTT + + + L+ N V E P + + Sbjct: 1 MSRPLFVSLDGPKGAGKTTLLEAITKVLRADNKKVIRLCEKKSDPYRGETMALVNQLARN 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +D E FA +R + + G I+L DR+ S A+ R Sbjct: 61 PTLDLEWEVCER--FADSRAW-ISQQVLTKQPPGSIILMDRWYPSDAAF---RRMVPFAE 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + L I MPD T DI R R S + E Sbjct: 115 ILQLN-IERNVWMPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKLE 160 >gi|118594496|ref|ZP_01551843.1| Deoxynucleoside kinase [Methylophilales bacterium HTCC2181] gi|118440274|gb|EAV46901.1| Deoxynucleoside kinase [Methylophilales bacterium HTCC2181] Length = 215 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 58/173 (33%), Gaps = 18/173 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G+GK+T LL + R P E +H L Sbjct: 9 YIVVEGPIGSGKSTLARLLANQFNANMFSEKAERNPFLPKFYEDMKHYALPTQ------- 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123 + F R + + + + ++ D FL D +A + L+ + + Sbjct: 62 ---LFFLFQRANQISELKQNDFFRNG-VVADFFLQKDPIFARLNLDNEEFKLYDQIYRHL 117 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYF-ERKDVMIHE 171 ++ PD I L PVD+ RV+ R E L+ E H Sbjct: 118 EIKAPTPDLVIYLQTPVDLLRARVEKRNIGYEQKISTEYLERIAESYSSYFHN 170 >gi|47230082|emb|CAG10496.1| unnamed protein product [Tetraodon nigroviridis] Length = 371 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 20/162 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++ GKTT L L + R P + AR D+ Sbjct: 218 IVIEGLDATGKTTLTESLVGAL-----GATLLRSPPQCLSPFRAR-------FDQEPPLI 265 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER--DSSQHLFLDS---LQ 121 +A + IR A ++ DRF S+ AY H + Sbjct: 266 RRAFYALGNYITADQAIREAGKAP--VIIDRFWHSTAAYAIATALRGPVHNLPAEGSEVY 323 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 P ++L L + +R+++R L ++ + E Sbjct: 324 RWPGDLFQPHLVVLLTLDPEERRRRLKDRG-LIKTKEEEKLE 364 >gi|327438136|dbj|BAK14501.1| deoxynucleoside kinase [Solibacillus silvestris StLB046] Length = 212 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 29/221 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + + V P E E+ + Sbjct: 5 FITVEGPIGVGKTSLSKAVSQTFDYHLLKEIVDENPFLGKFYEDI---------SEWSFQ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSLQEIS 124 E + F R + + I + ++ D + + + ++ +S+ I Sbjct: 56 TE-MFFLCNRYKQLSD-IHEIIEAQGPVVADYHIFKNLIFAKRTLKPTEYEKYESIYRIL 113 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL-DIA 181 + P+ I L +D +KR+ R E +Y E+ H+ F+ Sbjct: 114 TADMPKPNMVIYLHASLDTLMKRIAMRGREVEKNISREYIEQLSSDYHQ-----FIGHFE 168 Query: 182 RNQPDRCHIV-------DSAHSFQSVATNILNIVWELVQKR 215 + P+ ++ D S + + +L +V E +Q+R Sbjct: 169 KMHPE-IPVISLNGDELDFVKSEEDL-QYVLRLVEEKLQQR 207 >gi|284988973|ref|YP_003407527.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160] gi|284062218|gb|ADB73156.1| thymidylate kinase [Geodermatophilus obscurus DSM 43160] Length = 209 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 69/214 (32%), Gaps = 43/214 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGV 59 G+ I+ G +GAGKTT L L + + V+ G R + + G Sbjct: 3 RRGMCIALLGPDGAGKTTLARSLAAALPVRVHYVY-----SGLWQRRERRSWVDGVRGGP 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118 A + AAR G +++ DR + L+ Sbjct: 58 RLRRLLRVARIGMAARWYR---------GLGHLVVLDR--------TPHEVRLRATGLNG 100 Query: 119 SLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L ++V+ PD I+LD P ++ R LD R+ Sbjct: 101 RLNALAVRLLAPTPDLMILLDAPPEVLFAR----KGEHSVEVLDGL-----------RRS 145 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + P VD+ ++V + ++ E Sbjct: 146 YRMMLEQFPAH-ATVDARADAETVRRQAIEVIRE 178 >gi|57866179|ref|YP_187799.1| deoxynucleoside kinase family protein [Staphylococcus epidermidis RP62A] gi|282874985|ref|ZP_06283860.1| deoxynucleoside kinase [Staphylococcus epidermidis SK135] gi|57636837|gb|AAW53625.1| deoxynucleoside kinase family protein [Staphylococcus epidermidis RP62A] gi|281296313|gb|EFA88832.1| deoxynucleoside kinase [Staphylococcus epidermidis SK135] gi|319399689|gb|EFV87938.1| deoxynucleoside kinase family protein [Staphylococcus epidermidis FRI909] Length = 205 Score = 66.2 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 85/221 (38%), Gaps = 27/221 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + V P + + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ +L +G ++ D + + + D+ + Sbjct: 51 KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +D+ R+ R ES E ++ +K + Sbjct: 106 IFDILTEDIEMPNTIIFLDADLDVLKSRIAQRNRSFESQ----IEDDYLLTLKKDYLAYY 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214 + +N +D++ V + ILN+V ++ + Sbjct: 162 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 201 >gi|255994227|ref|ZP_05427362.1| dTMP kinase [Eubacterium saphenum ATCC 49989] gi|255993895|gb|EEU03984.1| dTMP kinase [Eubacterium saphenum ATCC 49989] Length = 78 Score = 65.8 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Query: 137 DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS 196 D+ D KR +R + + D E ++ H K + + +A+ DR +D Sbjct: 2 DISHDECYKRRVSR-DKEQGSQCDRLESENDEFHSKVYEGYKILAKENSDRIFTIDGCRD 60 Query: 197 FQSVATNILNIVWELVQK 214 Q + +IL+I+ + + Sbjct: 61 EQKITEDILSILKSRMDR 78 >gi|297566842|ref|YP_003685814.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946] gi|296851291|gb|ADH64306.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946] Length = 205 Score = 65.8 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 42/195 (21%), Positives = 72/195 (36%), Gaps = 24/195 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG+ G GKTT LL L + V P L +G Sbjct: 1 MYIAIEGVIGVGKTTLTRLLAERLGAEKLLEVVEDNPFLP---------LFYQDPARYGF 51 Query: 65 EAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQ 121 + + F +R + + +PAL G ++ D D + S L D Sbjct: 52 KVQVF-FLLSRYKQLLPLAQPALFSRG--VVADYLFDKDAIFASLNLSGAEWDLYADLYS 108 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDI 180 +S + PD T+ L P+ + L+R++ R FE++ D E+ + + Sbjct: 109 HLSPRIPTPDLTVYLRAPLPVLLERIRRRGRP--------FEQQIDPGYLERLGESYDRH 160 Query: 181 ARNQPDRCHIVDSAH 195 P IV++ Sbjct: 161 FATYPHPLWIVEADQ 175 >gi|229003026|ref|ZP_04160884.1| Deoxyguanosine kinase [Bacillus mycoides Rock1-4] gi|228758226|gb|EEM07413.1| Deoxyguanosine kinase [Bacillus mycoides Rock1-4] Length = 227 Score = 65.8 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E +E+ + Sbjct: 22 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYENI---------EEWSFQ 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R +E++ L + K ++ D + + + S + D + Sbjct: 73 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHILKNLIF--ASRSLKDAQYDKYMQIYR 129 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 I Q+ +P+ + L ++ KR+ R E Sbjct: 130 ILTQDMPVPNVIVYLTASLETLQKRIAMRGRKFEKN 165 >gi|9971893|gb|AAG10455.1|AF279106_17 predicted deoxypurine kinase [uncultured marine gamma proteobacterium EBAC31A08] Length = 221 Score = 65.8 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 18/170 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG G GKTT + + NYD + +P P ++ + A Sbjct: 12 KYIAIEGPIGVGKTTLANKIAETF---NYDSFL-EQPAENPF---LKNFYKNPSQ---SA 61 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 A + F R+ ++++ + +L E + + D FL D +A + + + D + Sbjct: 62 LATQLFFLFQRMQQIQDLKQRSLFE-TVRVAD-FLIEKDRLFA-EVTLSNEEMDLYDKVY 118 Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169 + +++ PD I L P+D+ R+ R ++ E LDY ER + Sbjct: 119 DHLTLDAPTPDLVIYLQAPIDVLKDRITKRGNINEQYLTLDYLERLNDAY 168 >gi|73663466|ref|YP_302247.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495981|dbj|BAE19302.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 205 Score = 65.8 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 21/197 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EG G GK++ L + + +T P + E Sbjct: 1 MKK-QFIAVEGPIGVGKSSLAHKLSQTYKYYEEKEIITENPFLSDFYEDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDS 119 ++ + E + F R +++ AL+E I+ D + + + ++++ Sbjct: 51 KWSFQTE-MFFLCNRYKQFQDL---ALIENGIV-SDYHIYKNKIFANNTLTTTEYNKFSR 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD + R+ +R E D + ++ ++ + Sbjct: 106 IYDILTEDLEMPNMIIFLDADLATLKSRIAHRNRSFEHQIADDY----LLNLKRDYNDYY 161 Query: 179 DIARNQPDRCHIVDSAH 195 + +N +R +D+ H Sbjct: 162 ESLKNDGERVIRIDTTH 178 >gi|91774953|ref|YP_544709.1| deoxynucleoside kinase [Methylobacillus flagellatus KT] gi|91708940|gb|ABE48868.1| deoxynucleoside kinase [Methylobacillus flagellatus KT] Length = 215 Score = 65.4 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 61/179 (34%), Gaps = 29/179 (16%) Query: 6 FISFEGIEGAGKTTHISLLKR------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 +I EG G+GKTT + L L+ + + + P R+ L Sbjct: 9 YIVVEGPIGSGKTTLANKLADMFPVNLLLENAGANPFLPKFYQDAP-----RYAL----- 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFL 117 +F R++ + ++I+ + + D FL D +A D L+ Sbjct: 59 ----PTQMFFLF--QRVEQIRDLIQRDMFNQAT-IADFFLEKDPLFAQMNLNDEEYALYR 111 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEK 172 + + VQ PD I L PV+ +RV R + E L + Sbjct: 112 QMYKHLHVQVPTPDLVIYLQSPVETLHERVNQRGNAYEQEIPREYLARLSDAYSDFFHR 170 >gi|228995412|ref|ZP_04155083.1| Deoxyguanosine kinase [Bacillus mycoides Rock3-17] gi|228764338|gb|EEM13214.1| Deoxyguanosine kinase [Bacillus mycoides Rock3-17] Length = 227 Score = 65.4 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E +E+ + Sbjct: 22 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYENI---------EEWSFQ 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R +E++ L + K ++ D + + + S + D + Sbjct: 73 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHILKNLIF--ASRSLKDAQYDKYMQIYR 129 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 I Q+ +P+ + L ++ KR+ R E Sbjct: 130 ILTQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 165 >gi|118088982|ref|XP_419937.2| PREDICTED: similar to LOC129607 protein [Gallus gallus] Length = 287 Score = 65.4 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 68/237 (28%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F + FEG++ GKTT +K L V + P Sbjct: 87 RKGEFPVVVFEGLDATGKTTVTQSVKDALGA----VLLRSPPACISQWRTI-------FD 135 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E A +AA + + + ++ DR+ S+ AY ++ Sbjct: 136 EEPTPIRRAF-YAAGNYILASEIAKASTQAP--VIVDRYWHSTAAYTVATETDG------ 186 Query: 120 LQEISVQEVMPDCTIILD-------------------LPVDIGLKRVQNRYSLR------ 154 ++Q + PD D + + +R++ R R Sbjct: 187 ----NIQNLPPDH----DAVYKWPEDLLKPDLVLLLTVSPEERARRLEARGLERTKEEAE 238 Query: 155 -ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 E+ L ++ + + + P C VD++ S + V +L ++ + Sbjct: 239 LEANSL---------FRQRIEESYRRMV--NPA-CQEVDASPSKEEVFKTVLQLIKK 283 >gi|329729474|gb|EGG65877.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU144] gi|329737863|gb|EGG74095.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU045] Length = 205 Score = 65.4 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 86/221 (38%), Gaps = 27/221 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + V P + + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHRLSKTFGFYEEKEIVDENPFLSDFYDDI---------E 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R + ++ +L +G ++ D + + + D+ + Sbjct: 51 KWSFQTE-MFFLCNRYKQIRDI--ESLNQG--IVSDYHIHKNKIFAKNTLDAKEFDKFSR 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +++ R+ R ES + E ++ +K + Sbjct: 106 IFDILTEDIEMPNTIIFLDADLNVLKSRIAQRNRSFES----HIEDDYLLTLKKDYLAYY 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQK 214 + +N +D++ V + ILN+V ++ + Sbjct: 162 ESLKNDGANVIRIDTSQ-QDFVKNDYDYQNILNLVKPMIGE 201 >gi|229027867|ref|ZP_04184024.1| Deoxyguanosine kinase [Bacillus cereus AH1271] gi|228733443|gb|EEL84268.1| Deoxyguanosine kinase [Bacillus cereus AH1271] Length = 211 Score = 65.4 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ R+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQARIAKRGREFEKN 149 >gi|166240506|ref|XP_641009.2| deoxyguanosine kinase [Dictyostelium discoideum AX4] gi|182647414|sp|Q54UT2|DGK_DICDI RecName: Full=Deoxyguanosine kinase; Short=dGK; AltName: Full=DddGK gi|56384964|gb|AAV85947.1| deoxyguanosine kinase [Dictyostelium discoideum] gi|165988632|gb|EAL67033.2| deoxyguanosine kinase [Dictyostelium discoideum AX4] Length = 285 Score = 65.0 bits (158), Expect = 6e-09, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 60/162 (37%), Gaps = 21/162 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I EG AGKT S L L Y V + EP T LS E Sbjct: 33 KIIILEGNISAGKTYLSSKLGDLL---GYKVFL--EPTATNP-------YLSLFYKEPSK 80 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A + R + N ++ +L + ++ DR + S + + S + + +E Sbjct: 81 YALIMQKWLLNQRYNTFLNALQYSLENEQGVILDRSVYSDWVFAENCRSEGLISAEGFKE 140 Query: 123 ISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ T+ LD+ L+R+QNR E + Sbjct: 141 YNSIRDRFLSNIPIPNVTLFLDVDPKQCLQRIQNRKRDCEQS 182 >gi|228937322|ref|ZP_04099970.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970208|ref|ZP_04130869.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228976778|ref|ZP_04137192.1| Deoxyguanosine kinase [Bacillus thuringiensis Bt407] gi|228782940|gb|EEM31104.1| Deoxyguanosine kinase [Bacillus thuringiensis Bt407] gi|228789509|gb|EEM37427.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822347|gb|EEM68327.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326937812|gb|AEA13708.1| deoxyguanosine kinase [Bacillus thuringiensis serovar chinensis CT-43] Length = 211 Score = 65.0 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQKKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|229159194|ref|ZP_04287220.1| Deoxyguanosine kinase [Bacillus cereus R309803] gi|228624275|gb|EEK81075.1| Deoxyguanosine kinase [Bacillus cereus R309803] Length = 211 Score = 65.0 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQKKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|220934059|ref|YP_002512958.1| DNA polymerase III, epsilon subunit [Thioalkalivibrio sp. HL-EbGR7] gi|219995369|gb|ACL71971.1| DNA polymerase III, epsilon subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 216 Score = 65.0 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 30/205 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G GKT+ L L + + P P E + Sbjct: 8 YIVVEGPIGVGKTSLARRLAETLNAE----LLLEAPEENPFLE---RFYQDPRGAALPTQ 60 Query: 66 AEAIVFAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + F R+ + + +P + ++ DR +A Q D +H + + Sbjct: 61 ---LFFLMQRVRQMAELRQGDIFKPVRVSDFLIEKDR----LFA-QVTLDDDEHSLYEQV 112 Query: 121 Q-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++++ PD I L PV++ L+R+ R E D + + + Sbjct: 113 YSQMTLDAPKPDLVIYLQAPVEVLLERIARRGRGYER-------LMDSAYLHRLSEAYAS 165 Query: 180 IARNQPD-RCHIVDSAHSFQSVATN 203 + D IV+++ V + Sbjct: 166 FFYHYEDAPLLIVNASG-IDWVNRD 189 >gi|119591692|gb|EAW71286.1| deoxythymidylate kinase (thymidylate kinase), isoform CRA_d [Homo sapiens] Length = 83 Score = 65.0 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGK+T L L + + R P + L D Sbjct: 4 RRGALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRFPERSTEIGKLLSSYLQKKSD- 62 Query: 62 FGAEAEAIVFAAARLDHV 79 + ++F+A R + V Sbjct: 63 VEDHSVHLLFSANRWEQV 80 >gi|321456889|gb|EFX67986.1| hypothetical protein DAPPUDRAFT_231763 [Daphnia pulex] Length = 397 Score = 65.0 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 51/179 (28%), Gaps = 24/179 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 I EG AGK L L + + R V Sbjct: 79 KLIVVEGPPAAGKRALAKELAEELDMAYFPSPNVADCYINKYGYDLRQVDHKLPESCKSY 138 Query: 54 -----LLSCGVDEFGAEAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQG 107 L A + + + + L G+ ++ DR S AY Sbjct: 139 DENDFLKDPMRGNGSKAARFQLTKLSLRYKLHLEALAHILNTGQGVVMDRSPFSDLAYMT 198 Query: 108 ERDSSQHL------FLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 + + F ++ ++ + P I LD+PVD +R++ R E + Sbjct: 199 AMTETGIISKNVYNFYHQVRNNALFALWRPHLVIYLDVPVDETRRRIEARNLPNEKDSM 257 >gi|163938028|ref|YP_001642912.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4] gi|229053866|ref|ZP_04195303.1| Deoxyguanosine kinase [Bacillus cereus AH603] gi|229131027|ref|ZP_04259943.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST196] gi|229165009|ref|ZP_04292807.1| Deoxyguanosine kinase [Bacillus cereus AH621] gi|163860225|gb|ABY41284.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4] gi|228618461|gb|EEK75488.1| Deoxyguanosine kinase [Bacillus cereus AH621] gi|228652439|gb|EEL08360.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST196] gi|228721476|gb|EEL72993.1| Deoxyguanosine kinase [Bacillus cereus AH603] Length = 211 Score = 65.0 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ L +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKELSTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|229083332|ref|ZP_04215692.1| Deoxyguanosine kinase [Bacillus cereus Rock3-44] gi|228699979|gb|EEL52604.1| Deoxyguanosine kinase [Bacillus cereus Rock3-44] Length = 211 Score = 65.0 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYENI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R +E++ L + K ++ D + + + + + D + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIF--ASRTLKDAQYDKYMQIYR 113 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 I Q+ +P+ + L ++ KR+ R E Sbjct: 114 ILTQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|229009530|ref|ZP_04166759.1| Deoxyguanosine kinase [Bacillus mycoides DSM 2048] gi|228751741|gb|EEM01538.1| Deoxyguanosine kinase [Bacillus mycoides DSM 2048] Length = 211 Score = 64.7 bits (157), Expect = 8e-09, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ L +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKELSTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|145206872|gb|ABP37829.1| thymidylate kinase [Candidatus Phytoplasma solani] Length = 99 Score = 64.7 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 5/92 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I L+ L+ + + G + + R + L+ + Sbjct: 13 KLIVFEGLDGSGKTSLIHALQPQLKT---PHQLYQGLGSSSLGKEIRDLFLN--FQQVDY 67 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + A +I L ++++ D Sbjct: 68 LTRFYLSLANMTQIQAELIVSQLKNNQLIILD 99 >gi|293363201|ref|ZP_06610085.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] gi|292553060|gb|EFF41809.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] Length = 218 Score = 64.7 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 79/223 (35%), Gaps = 15/223 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS G+ G+GK+T S L Q + + Sbjct: 1 MIISISGMIGSGKSTLSSKLHNHFQNSII--VEEFQKDDLIFNTFLDWCYQQKPNIDISF 58 Query: 65 EA---EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----LFL 117 +A EA+ + DH++ + + DRF Y + + Sbjct: 59 QAYIVEAL--SQNFYDHLKIYKNLDKNSNRYMFLDRFTLEHYVFAKVTLLKKEPKYFEAF 116 Query: 118 DSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++L E ++ +V PD I LD+ +R+ R E D E + + +Q Sbjct: 117 EALFE-NILDVKTNPDFAIYLDVDFLTAKQRIFKRQRASEVDNWDANEAYFKQLSDMYKQ 175 Query: 176 IFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQKRVS 217 F+ +A I+D+ + + + + +N + QK+++ Sbjct: 176 EFIKLALKYSIPFAIIDANSLNEEQILELAINKIALYKQKQIN 218 >gi|228989229|ref|ZP_04149223.1| Deoxyguanosine kinase [Bacillus pseudomycoides DSM 12442] gi|228770504|gb|EEM19074.1| Deoxyguanosine kinase [Bacillus pseudomycoides DSM 12442] Length = 211 Score = 64.7 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E +E+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISAHMQLHLLKEIVDENPFLGKFYENI---------EEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R +E++ L + K ++ D + + + S + D + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHILKNLIF--ASRSLKDAQYDKYMQIYR 113 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 I Q+ +P+ + L ++ KR+ R E Sbjct: 114 ILTQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|238854854|ref|ZP_04645184.1| putative thymidylate kinase [Lactobacillus jensenii 269-3] gi|260664141|ref|ZP_05864994.1| predicted protein [Lactobacillus jensenii SJ-7A-US] gi|282933932|ref|ZP_06339280.1| putative thymidylate kinase [Lactobacillus jensenii 208-1] gi|313472356|ref|ZP_07812848.1| putative thymidylate kinase (dTMP kinase) [Lactobacillus jensenii 1153] gi|238832644|gb|EEQ24951.1| putative thymidylate kinase [Lactobacillus jensenii 269-3] gi|239529787|gb|EEQ68788.1| putative thymidylate kinase (dTMP kinase) [Lactobacillus jensenii 1153] gi|260562027|gb|EEX27996.1| predicted protein [Lactobacillus jensenii SJ-7A-US] gi|281302021|gb|EFA94275.1| putative thymidylate kinase [Lactobacillus jensenii 208-1] Length = 221 Score = 64.7 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 43/248 (17%), Positives = 94/248 (37%), Gaps = 60/248 (24%) Query: 1 MNSGLFISFEGIEGAGKTT----------------HISLLKRFLQRKNYDVHVTREPGGT 44 M+ G+ I EGI +GKTT I L+ L ++ E Sbjct: 1 MSRGIIILIEGISNSGKTTLCNSLKNKANFEIIPEAIRYLENRLNDCGDNILFVPENSNQ 60 Query: 45 PAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 +L ++ ++ A L +G+ ++ D+ S A Sbjct: 61 EVLNQ--ELLFDIEFEK--------LYDANFLA----------QKGENVVIDKSAFSILA 100 Query: 105 ---------YQGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSL- 153 QG + ++ F + ++I+ ++ PD +I+L ++I +R +NR Sbjct: 101 TANAFQSSIIQGTYEIAEKFFHEYEKKIARFDLAKPDLSILLKADLEISEERNKNRKHKL 160 Query: 154 --RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWE 210 ++ + F+++ V+ E F I + I+D+++ S + V ++ + Sbjct: 161 LNIWTSPITRFKQERVLESE-----FEKI-----NNKMILDTSNMSKEEVYKQVIETIKL 210 Query: 211 LVQKRVSP 218 ++ + +S Sbjct: 211 MIGRDISE 218 >gi|42560979|ref|NP_975430.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492476|emb|CAE77072.1| Deoxynucleoside kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320814|gb|ADK69457.1| conserved hypothetical protein [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 214 Score = 64.7 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 32/222 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT + LK+ L +K V+ T P A D Sbjct: 3 IAIFGTTGAGKTTLLENLKKLLDKKYVFVNETS--LDCPYFNKAYD---DSNSDVQDYNY 57 Query: 67 EA-IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHLFLDSLQE 122 + + R ++ I+ + ++ DR + S + + ++ Sbjct: 58 KLDLWMLTDR---MKTFIK--YKNHQNVIYDRSILDSMVFSQTDHIYNRLDDRDYNVFKD 112 Query: 123 ISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + ++P D I L + +KR+ R E D F ++ Sbjct: 113 YFLTCILPNIFDCQTNNKIFDIVIYLKVDPYKAIKRINKRSRDIELDTNDLFWLNLTKVY 172 Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211 E I+ ++ P ++D+ +A I N + E+ Sbjct: 173 EFWYDIYKEVI---P--FWVIDANVDEPNYIANMIANKIKEI 209 >gi|50120419|ref|YP_049586.1| hypothetical protein ECA1481 [Pectobacterium atrosepticum SCRI1043] gi|49610945|emb|CAG74390.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 212 Score = 64.7 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 60/175 (34%), Gaps = 27/175 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 M+ LFIS +G +GAGKTT + + + L+ N V E P + + Sbjct: 1 MSRPLFISLDGPKGAGKTTLLEAITKVLRADNKKVIRLCEKKSDPYRGETMALVNKLARN 60 Query: 57 CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 +D E FA +R HV P I+L DR+ S A+ R Sbjct: 61 PTLDLEWEICER--FADSRAWISLHVLTKQPP----DSIILMDRWYPSDAAF---RRMVP 111 Query: 114 HLFLDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + L I PD T DI R R S + FE Sbjct: 112 FAEILQLN-IERNVRTPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKFE 160 >gi|118340537|gb|ABK80587.1| putative deoxynucleoside kinase [uncultured marine Nitrospinaceae bacterium] Length = 216 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 16/169 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EG GAGKT+ ++LL++ + V + E P + + Sbjct: 9 RFIAVEGSIGAGKTSLVNLLEQ---QYGARVIL-EENDSNPFITKFYE-----DQETYSF 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + F +R + + + L +++ D +L D +A D L+ Sbjct: 60 QTQIY-FLLSRYNQYIELAQRDLFNSVVVI-D-YLFQRDKIFAQLNLEDHEYRLYEQIYN 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMI 169 IS + PD I L ++ L+RV R ES DY + + Sbjct: 117 LISSKAPKPDLVIFLQASTEVLLERVSKRGREYESFMDPDYLDSVNKAF 165 >gi|159901602|ref|YP_001547848.1| thymidylate kinase-like [Herpetosiphon aurantiacus ATCC 23779] gi|159894641|gb|ABX07720.1| Thymidylate kinase-like [Herpetosiphon aurantiacus ATCC 23779] Length = 230 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 65/226 (28%), Gaps = 41/226 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFG 63 +I+ G +G GKTT + L L + V R P + E Sbjct: 20 YIT--GSDGTGKTTQVHRLMEVLTAQGLPVIHRWLRFPFRLSGLLLVYARIRGLSWYEAH 77 Query: 64 AEAEA---IVFAAARLDHVENV--IRPAL-----------MEGKILLCDRFLDSSYAYQG 107 A+ + HV + AL G I++C+RF+ A Sbjct: 78 PYGRQGYWDFHASWLMQHVFPIVLWFDALSVAIQAVYWPISRGNIIVCERFVVDMLADLM 137 Query: 108 ERDSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACL-DYFER 164 L ++ ++P I+LD +R R L L D Sbjct: 138 VATQDFGLLKRWYARWFMR-LLPARTLVILLDGDPVHIRQR---RPDLAYDRVLSDRI-- 191 Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 R IA ++ + S ++ I V + Sbjct: 192 ------RAVR----IIAAQCG--WPLIAADQSIDAIHQTICTFVED 225 >gi|229100806|ref|ZP_04231624.1| Deoxyguanosine kinase [Bacillus cereus Rock3-28] gi|228682613|gb|EEL36672.1| Deoxyguanosine kinase [Bacillus cereus Rock3-28] Length = 211 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKFLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|228475248|ref|ZP_04059973.1| deoxynucleoside kinase family protein [Staphylococcus hominis SK119] gi|228270713|gb|EEK12122.1| deoxynucleoside kinase family protein [Staphylococcus hominis SK119] Length = 205 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 82/221 (37%), Gaps = 31/221 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ + + + + P + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLTHKISQTFNYYEENEIINENPFLSDFYDDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ + E + F R +++ + + +G ++ D + + + R++ D Sbjct: 51 KWSFQTE-MFFLCNRYKQAQDIAK--INQG--VVSDYHIYKNRIF--ARNTLNESEFDKF 103 Query: 121 QEIS---VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 I +++ P+ I LD +D+ +R+ R E E ++ +K Sbjct: 104 NRIFNILTEDLESPNMIIFLDADLDVLKRRIAKRNRSFEHQ----IEDSYLLNLKKDYLS 159 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELV 212 F + +N+ ++D++ V ILN + ++ Sbjct: 160 FYETLKNEGANVILIDTS-DLDFVQNESDYQLILNQIKPMI 199 >gi|254468053|ref|ZP_05081459.1| deoxyadenosine kinase, putative [beta proteobacterium KB13] gi|207086863|gb|EDZ64146.1| deoxyadenosine kinase, putative [beta proteobacterium KB13] Length = 217 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 63/195 (32%), Gaps = 23/195 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G+GK+T +L + P + L Sbjct: 10 YIVVEGPIGSGKSTLSRMLSENFGSNFIKEKADQNPFLPKFYKNMSQYALPTQ------- 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDSLQEI 123 + F R + + ++ + + D F+ +A Q D + + + Sbjct: 63 ---LFFLFQRAEQINDIKQNDFFHKGTV-ADFFIYKDPIFA-QLNLDEEELKLYKQIYQF 117 Query: 124 -SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYF-ERKDVMIHEKRRQIF 177 ++ PD I L PV++ KRV+ R E L+ E H K Q Sbjct: 118 LELKVPKPDLVIYLQTPVELLKKRVERRSINYEKTISTEYLEKIAEAYSNFFHFKYNQKL 177 Query: 178 LDIARNQPDRCHIVD 192 L + + I+D Sbjct: 178 LIV---NNENLDIID 189 >gi|70727434|ref|YP_254350.1| hypothetical protein SH2435 [Staphylococcus haemolyticus JCSC1435] gi|68448160|dbj|BAE05744.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 205 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 85/219 (38%), Gaps = 27/219 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L + P + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLTHKLSQTLNYYEEKEIIDENPFLSDFYDDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS 119 ++ + E + F R +++ + + +G ++ D + + + S+ D Sbjct: 51 KWSFQTE-MFFLCNRYKQAKDIAK--MTQG--VVSDYHIYKNKIFARNTLSNNEFDKFDR 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +I +++ MP+ I LD +++ +R+ R E + E ++ ++ F Sbjct: 106 IFDILTEDLEMPNMIIFLDADLEVLKQRIAQRNRSFEH----HIEDDYLLNLKEDYLTFY 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELV 212 + +++ +++++ V + IL + ++ Sbjct: 162 NAMKSEGANVVLINTS-EIDFVKNDSDYQSILEKIRPMI 199 >gi|329896234|ref|ZP_08271412.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088] gi|328921905|gb|EGG29272.1| Deoxyadenosine kinase [gamma proteobacterium IMCC3088] Length = 224 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 60/172 (34%), Gaps = 19/172 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG+ G GKTT L + Q + T P T E R A Sbjct: 17 FIAIEGVIGVGKTTLARRLAQTFQYQTILEDPTANPFLTKFYEDMRQ----------HAL 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 A + F R ++ + + + + D F+ D +A L+ Q+ Sbjct: 67 ATQLSFLFQRTQAIQALRQSDIFAPLHV-AD-FMLQKDPLFARLTLNSEEYELYDKVYQQ 124 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIH 170 ++V PD I L P D+ L R++ R E L+ + Sbjct: 125 MTVDVPRPDLVIYLQAPTDVLLSRIERRGISSERRISADYLNKLNQAYSEFF 176 >gi|110004424|emb|CAK98762.1| putative deoxynucleoside kinase protein [Spiroplasma citri] Length = 202 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 66/224 (29%), Gaps = 46/224 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G+ G GK+T LL H + + Sbjct: 3 ITLAGVVGVGKSTVSKLL-------GKKHHYMVMDEPVEENPYLDQYYADPK--DMAFKM 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF---------------LDSSYAYQGERDS 111 + + A + I ++ DR ++ Y+ ++ Sbjct: 54 QVYMVMARSKQLKQAKITSN------IIFDRSILEDPIFVDVLYELGYMNTTDYKVYKEF 107 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF----ERKDV 167 + L SL + + P+ + L + +I ++R+ R E + RK Sbjct: 108 YDVVVLQSLYL--DENIKPELVVYLRVDPEIAMERITKRGRASEQNIGSAYWTLLNRKYE 165 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWE 210 +E+ + F ++D+ + + + I + E Sbjct: 166 EWYERSKDKF---------NFLVIDANHKTPEEIVAIISEKLIE 200 >gi|314937114|ref|ZP_07844461.1| deoxynucleoside kinase family protein [Staphylococcus hominis subsp. hominis C80] gi|313655733|gb|EFS19478.1| deoxynucleoside kinase family protein [Staphylococcus hominis subsp. hominis C80] Length = 205 Score = 64.3 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 83/221 (37%), Gaps = 31/221 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ + + + + P + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLTHKISQTFNYYEENEIINENPFLSDFYDDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ + E + F R +++ + + +G ++ D + + + R++ D Sbjct: 51 KWSFQTE-MFFLCNRYKQAQDIAK--INQG--VVSDYHIYKNRIF--ARNTLNESEFDKF 103 Query: 121 QEIS---VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 I +++ +P+ I LD +D+ +R+ R E E ++ +K Sbjct: 104 NRIFNILTEDLELPNMIIFLDADLDVLKRRIAKRNRSFEHQ----IEDSYLLNLKKDYLS 159 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELV 212 F + +N+ ++D++ V ILN + ++ Sbjct: 160 FYETLKNEGANVILIDTS-DLDFVQNESDYQLILNQIKPMI 199 >gi|56964653|ref|YP_176384.1| deoxypurine kinase [Bacillus clausii KSM-K16] gi|56910896|dbj|BAD65423.1| deoxypurine kinase [Bacillus clausii KSM-K16] Length = 207 Score = 63.9 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 69/204 (33%), Gaps = 28/204 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG+ G GKTT + R+ V P + ++E+ + Sbjct: 5 FICVEGVIGVGKTTLAKAIATHYGRECLLEIVEENPFLEKFYD---------NMEEWSFQ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLDSLQEI 123 E + F R+ +E+ I P L K+++ D + + +A Q + Q + Sbjct: 56 TE-MFFLCNRVKQLED-IGPVL-NHKLVVSDYHICKNLIFARQTLSAFKWSQYRRIFQIL 112 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFL---- 178 + P I L + R+ R FE++ D K + Sbjct: 113 NEPLPKPTVVIYLKAGLSTLTNRITKRGRP--------FEKEMDPNYLRKLSDDYEATMA 164 Query: 179 DIARNQPDRCHIVDSAHSFQSVAT 202 ++A+ + +D VA Sbjct: 165 ELAKEENTTVLTID-TDDLDFVAN 187 >gi|229074080|ref|ZP_04207129.1| Deoxyguanosine kinase [Bacillus cereus Rock4-18] gi|229094740|ref|ZP_04225748.1| Deoxyguanosine kinase [Bacillus cereus Rock3-29] gi|229113694|ref|ZP_04243131.1| Deoxyguanosine kinase [Bacillus cereus Rock1-3] gi|228669760|gb|EEL25165.1| Deoxyguanosine kinase [Bacillus cereus Rock1-3] gi|228688678|gb|EEL42548.1| Deoxyguanosine kinase [Bacillus cereus Rock3-29] gi|228709043|gb|EEL61167.1| Deoxyguanosine kinase [Bacillus cereus Rock4-18] Length = 211 Score = 63.9 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|110833199|ref|YP_692058.1| deoxynucleoside kinase [Alcanivorax borkumensis SK2] gi|110646310|emb|CAL15786.1| Deoxynucleoside kinase [Alcanivorax borkumensis SK2] Length = 233 Score = 63.9 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 75/225 (33%), Gaps = 42/225 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKR------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 FI+ EG GAGKT+ L L++ + + +TR Sbjct: 24 RFIAVEGPIGAGKTSLAKRLAMTFGYDLLLEQADDNPFLTRFY---------------QD 68 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + E + F R D + V + L G + D +D + + L Sbjct: 69 PTRYALQTE-LFFLFQRADQLRQVQQQDLFAGPR-IADFLIDKNRLFAQVTLDEDEFQLY 126 Query: 119 SLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEK 172 S + ++V PD I L P + +R+ +R + E LD Sbjct: 127 SNVDDHLTVDAPRPDLVIYLQAPSQVLRQRIGHRGNNFEQGIASDYLDKLSNAYTEFFH- 185 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVA--TNILNIVWELVQKR 215 F D A IV++A V + ++ EL+ R Sbjct: 186 ----FYDRAPL-----LIVNAA-EIDLVNHDRDYQQLISELLDIR 220 >gi|260811992|ref|XP_002600705.1| hypothetical protein BRAFLDRAFT_123496 [Branchiostoma floridae] gi|229285994|gb|EEN56717.1| hypothetical protein BRAFLDRAFT_123496 [Branchiostoma floridae] Length = 368 Score = 63.9 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 63/180 (35%), Gaps = 22/180 (12%) Query: 12 IEG---AGKTTHISLLKRFLQRKNY---DVHVT--REPGGTPAAEA------ARHVLLSC 57 I+G GKTT L L K + DVH E G+P + Sbjct: 75 IDGNLAVGKTTLGKELAEKLGMKYFPEVDVHYFDRFEGDGSPMDKKFSGNVSLEQFYKDP 134 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--- 114 + + +V R + + G+ ++ DR + S + + ++ Sbjct: 135 SDPDGHSIRFQLVMFVLRYFQFCEAMNHLISTGQGVILDRSVHSDFVFLEAMYKERYIKK 194 Query: 115 ---LFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169 + ++E + +++P I LD+P + K++Q R E L Y E D Sbjct: 195 HCYDYYYMVKEEVINKILPPHLVIYLDVPPEEVQKKIQKRGIEMEKEIPLTYLETLDDAY 254 >gi|30018292|ref|NP_829923.1| deoxyguanosine kinase [Bacillus cereus ATCC 14579] gi|206972677|ref|ZP_03233617.1| deoxynucleoside kinase family protein [Bacillus cereus AH1134] gi|228918970|ref|ZP_04082351.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228950567|ref|ZP_04112703.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228956460|ref|ZP_04118258.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229039924|ref|ZP_04189690.1| Deoxyguanosine kinase [Bacillus cereus AH676] gi|229067783|ref|ZP_04201102.1| Deoxyguanosine kinase [Bacillus cereus F65185] gi|229107705|ref|ZP_04237343.1| Deoxyguanosine kinase [Bacillus cereus Rock1-15] gi|229125536|ref|ZP_04254570.1| Deoxyguanosine kinase [Bacillus cereus BDRD-Cer4] gi|229142825|ref|ZP_04271269.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST24] gi|229148428|ref|ZP_04276686.1| Deoxyguanosine kinase [Bacillus cereus m1550] gi|229176619|ref|ZP_04304025.1| Deoxyguanosine kinase [Bacillus cereus 172560W] gi|229188304|ref|ZP_04315355.1| Deoxyguanosine kinase [Bacillus cereus ATCC 10876] gi|296500853|ref|YP_003662553.1| deoxyguanosine kinase [Bacillus thuringiensis BMB171] gi|29893832|gb|AAP07124.1| Deoxyguanosine kinase [Bacillus cereus ATCC 14579] gi|87312651|gb|ABD37691.1| deoxyguanosine kinase [synthetic construct] gi|206732397|gb|EDZ49579.1| deoxynucleoside kinase family protein [Bacillus cereus AH1134] gi|228595172|gb|EEK52940.1| Deoxyguanosine kinase [Bacillus cereus ATCC 10876] gi|228606849|gb|EEK64264.1| Deoxyguanosine kinase [Bacillus cereus 172560W] gi|228635037|gb|EEK91608.1| Deoxyguanosine kinase [Bacillus cereus m1550] gi|228640639|gb|EEK97025.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST24] gi|228657920|gb|EEL13724.1| Deoxyguanosine kinase [Bacillus cereus BDRD-Cer4] gi|228675745|gb|EEL30951.1| Deoxyguanosine kinase [Bacillus cereus Rock1-15] gi|228715336|gb|EEL67193.1| Deoxyguanosine kinase [Bacillus cereus F65185] gi|228727414|gb|EEL78605.1| Deoxyguanosine kinase [Bacillus cereus AH676] gi|228803217|gb|EEM50037.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228809110|gb|EEM55593.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228840685|gb|EEM85945.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|296321905|gb|ADH04833.1| deoxyguanosine kinase [Bacillus thuringiensis BMB171] Length = 211 Score = 63.9 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|207723646|ref|YP_002254044.1| hypothetical protein RSMK01029 [Ralstonia solanacearum MolK2] gi|206588849|emb|CAQ35811.1| hypothetical protein RSMK01029 [Ralstonia solanacearum MolK2] Length = 187 Score = 63.9 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 16/181 (8%) Query: 31 KNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAEAEAIVFA--AARLDHVENVIRPAL 87 + T P + R L G + E EA++ A + N + P L Sbjct: 11 RTRPCVSTWAPTQWWRHDINIRRALYGEGPGQPVPE-EALLHFNLADCHAYQANAVMPPL 69 Query: 88 MEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEISVQEVMPDCTIILDLPVDIGLKR 146 G+ ++ +R+L A R + +L D++ I PD +LD ++ + R Sbjct: 70 GRGEFVVSNRYLFDMLALFEARGMTLPTWLPDAVARIV----RPDFCFVLDGSSEVFVDR 125 Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + R F++ DV + +A+ ++ + + L+ Sbjct: 126 IVKRDGPMPG----RFDQ-DVQFVARYNAALRRLAQEND--LTVLRAEADPDHIVQQCLD 178 Query: 207 I 207 + Sbjct: 179 V 179 >gi|298717143|ref|YP_003729785.1| hypothetical protein Pvag_pPag30044 [Pantoea vagans C9-1] gi|298361332|gb|ADI78113.1| hypothetical protein Pvag_pPag30044 [Pantoea vagans C9-1] Length = 205 Score = 63.9 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 21/172 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 M+ LF+S +G +GAGKTT + + + L+ N V E P + + Sbjct: 1 MSRQLFVSLDGPKGAGKTTLLEAITQVLRADNMKVIRLSEKKSDPFRAESMALVNRLARD 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + FA +R + + + ++L DR+ S A+ R Sbjct: 61 PSADLEWEICQR--FAVSRAW-ISQNVLAKQPQDSVILMDRWYPSDAAF---RRMVSFTE 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + L + PD T ++ +R R S + E Sbjct: 115 ILQLNR-AHNVRAPDLHVGVVT-----APEVSWERAAARSRGLGSTVIHRLE 160 >gi|203284158|ref|YP_002221898.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia duttonii Ly] gi|201083601|gb|ACH93192.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia duttonii Ly] Length = 206 Score = 63.9 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 20/172 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GL I EG+ G GKTT +L + ++ RE Sbjct: 1 MEAGLVIVIEGLIGVGKTTLGHIL-----SLDLEIPFYRELDNEFTLSMLNEFYKD-KFR 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQ 113 + + R +++V + +GK +L DR + S + D+ Sbjct: 55 WAFPMQISFLNE--RFKLIKSVFK---SKGKGIL-DRSIYSDCVFASFLNDNGYISDNEY 108 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164 ++LD L + P+ I LD + R++ R E+ DY E+ Sbjct: 109 KIYLDLLDNMLEHSKKPELMIYLDCSIAEAENRIKKRNRSCETDISKDYLEK 160 >gi|325275524|ref|ZP_08141434.1| hypothetical protein G1E_19280 [Pseudomonas sp. TJI-51] gi|324099337|gb|EGB97273.1| hypothetical protein G1E_19280 [Pseudomonas sp. TJI-51] Length = 205 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 75/223 (33%), Gaps = 28/223 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN LF+S +G +G GKTT + + + L+ + V E P ++ + Sbjct: 1 MNRPLFVSLDGPKGTGKTTLLEAVTQALRLGGHKVVRLCERNNDPYRGDTMALVNRLARN 60 Query: 61 EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A E E A + + P G I+L DR+ S A+ R S + Sbjct: 61 PCQALEHEVCQRFADSRAWISRNVLPRQPAGSIILIDRWYPSDAAF---RRSVPFAQILQ 117 Query: 120 LQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERK---DVMIHE 171 L + +PD T + R R S + + + Sbjct: 118 LN-LERGVQVPDLHVGVVT-----AAETSWARAAARTRGLRSTVIHTLDEQVACTEAFER 171 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + RN+ + + + I+ ++ ++++ Sbjct: 172 AVAEQGWVLCRNE----------GTVEQASCQIVAEIYAVLRQ 204 >gi|75763791|ref|ZP_00743452.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488722|gb|EAO52277.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 217 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 12 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 63 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 122 TQDMPVPNVIVYLTASLETLQKRITLRGREFEKN 155 >gi|42779097|ref|NP_976344.1| deoxynucleoside kinase family protein [Bacillus cereus ATCC 10987] gi|52145194|ref|YP_081634.1| deoxyguanosine kinase [Bacillus cereus E33L] gi|206978344|ref|ZP_03239218.1| deoxynucleoside kinase family protein [Bacillus cereus H3081.97] gi|217957596|ref|YP_002336138.1| deoxynucleoside kinase family protein [Bacillus cereus AH187] gi|222093789|ref|YP_002527837.1| deoxyguanosine kinase [Bacillus cereus Q1] gi|228983275|ref|ZP_04143490.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229136863|ref|ZP_04265492.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST26] gi|229153799|ref|ZP_04281931.1| Deoxyguanosine kinase [Bacillus cereus ATCC 4342] gi|229194410|ref|ZP_04321215.1| Deoxyguanosine kinase [Bacillus cereus m1293] gi|42735012|gb|AAS38952.1| deoxynucleoside kinase family protein [Bacillus cereus ATCC 10987] gi|51978663|gb|AAU20213.1| deoxyguanosine kinase [Bacillus cereus E33L] gi|206743436|gb|EDZ54869.1| deoxynucleoside kinase family protein [Bacillus cereus H3081.97] gi|217063093|gb|ACJ77343.1| deoxynucleoside kinase family protein [Bacillus cereus AH187] gi|221237835|gb|ACM10545.1| deoxyguanosine kinase [Bacillus cereus Q1] gi|228589066|gb|EEK47079.1| Deoxyguanosine kinase [Bacillus cereus m1293] gi|228629668|gb|EEK86363.1| Deoxyguanosine kinase [Bacillus cereus ATCC 4342] gi|228646598|gb|EEL02803.1| Deoxyguanosine kinase [Bacillus cereus BDRD-ST26] gi|228776455|gb|EEM24806.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 211 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|330842896|ref|XP_003293404.1| hypothetical protein DICPUDRAFT_41960 [Dictyostelium purpureum] gi|325076274|gb|EGC30074.1| hypothetical protein DICPUDRAFT_41960 [Dictyostelium purpureum] Length = 280 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 55/167 (32%), Gaps = 18/167 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I EG AGKT S L L Y V EP T Sbjct: 34 KIIILEGNISAGKTFLASKLGDIL---GYKVFF--EPTTTNP--FLESFYKDPKKYALIM 86 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---- 120 + + R + N ++ ++ + ++ DR + S + + + D Sbjct: 87 QLWLLN---QRYNTYLNALQYSIENDRGVILDRSVYSDWVFAENCRLEGLINEDGFKEYS 143 Query: 121 ---QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFE 163 + +P+ T+ LD+ L R+QNR E S L Y E Sbjct: 144 RKREHFLSNIPIPNTTLYLDVNPKECLSRIQNRKRDCELSIPLSYLE 190 >gi|218895156|ref|YP_002443567.1| deoxynucleoside kinase family protein [Bacillus cereus G9842] gi|228905816|ref|ZP_04069715.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 200] gi|218544061|gb|ACK96455.1| deoxynucleoside kinase family protein [Bacillus cereus G9842] gi|228853824|gb|EEM98582.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 200] Length = 211 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIALRGREFEKN 149 >gi|158287505|ref|XP_309517.4| AGAP011130-PA [Anopheles gambiae str. PEST] gi|157019683|gb|EAA05289.4| AGAP011130-PA [Anopheles gambiae str. PEST] Length = 399 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 21/173 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 + +G AGK+ L L+ K + P R + Sbjct: 80 VVVDGPIAAGKSAFAKELAAELEMKYFPEVTMDNYYINPYGYDMRQLDAKLPATMQSFDV 139 Query: 54 -LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---- 108 A + + R + + G+ ++ DR + S + + Sbjct: 140 TKFHQNPTHRNAASFQVRMLVERFSQYADALAHLFSTGEGVVLDRSVYSDFVFLEAMFRN 199 Query: 109 ---RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 ++ ++ D ++ + P I LD+PVD+ +R++ R + E + Sbjct: 200 GYVSKGARSVYYDLVKNTFCDLMKPHLVIYLDVPVDVVKQRIKKRANPAEVSS 252 >gi|71894164|ref|YP_278272.1| hypothetical protein MS53_0141 [Mycoplasma synoviae 53] gi|71850952|gb|AAZ43561.1| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 210 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 24/218 (11%) Query: 7 ISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ G+ +GK+T L + + + E L + Sbjct: 3 IAISGMVASGKSTLTKKLHTEYFKN---SFMLKEYEEDDEVFEKLLKWKLEKKPNVVLPF 59 Query: 66 AEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLF-------L 117 I+ ++ ++ + + L + + DRF S +Q ++ L Sbjct: 60 EVYIM--DNHIEKMKKLYKEYLAKDNYYIFSDRF---SIEHQIFAITAFEKEPHKHKTYL 114 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI---HEKRR 174 D + I V EV+PD LD+ + KR R E +D + + H + Sbjct: 115 DVVNSIIVPEVLPDYIFYLDVTYETFEKRFLKRQYKSE---MDTYHKNKEAFKKLHTIYK 171 Query: 175 QIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211 + F+++ + + HIVD + VA + +++ L Sbjct: 172 ENFVNLCKEFNLKYHIVDVNNLDENEVAQKVASLIQNL 209 >gi|65317482|ref|ZP_00390441.1| COG1428: Deoxynucleoside kinases [Bacillus anthracis str. A2012] gi|118475793|ref|YP_892944.1| deoxyguanosine kinase [Bacillus thuringiensis str. Al Hakam] gi|118415018|gb|ABK83437.1| deoxyguanosine kinase [Bacillus thuringiensis str. Al Hakam] Length = 217 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 12 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 63 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 121 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ +R+ R E Sbjct: 122 TQDMPVPNVIVYLTASLETLQRRIAMRGREFEKN 155 >gi|223940590|ref|ZP_03632435.1| thymidylate kinase-like protein [bacterium Ellin514] gi|223890743|gb|EEF57259.1| thymidylate kinase-like protein [bacterium Ellin514] Length = 426 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 41/218 (18%) Query: 11 GIEGAGKTTHISLLKRFLQR--------KNYDVHVTREPGG---TPAAEAARHVLLSCGV 59 G +G+GK+T ++ L++ LQ ++ G P + R +L Sbjct: 232 GSDGSGKSTLLANLEQLLQPCFRHQQTFHFRPAVFQKKKQGVITDPHGKPPRGLL----- 286 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + A + P + +++ DR D Q L + Sbjct: 287 ---TSWLKVFYYFADHWAGWFLKVIPGKIRSTLIIFDRSFDDLLVDQKRYRLRGTSGLVA 343 Query: 120 LQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + ++ ++P D +L P + +R + L+ E++ + + Sbjct: 344 V----LRHLLPKADRVFVLSAPARVIHQR-------KPELPLEELEKQQSTLQQ------ 386 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 +A N+ R +V + + + VA + V + R Sbjct: 387 --LAANE-SRYALVSAEQTPEQVANAVCREVLLCLAAR 421 >gi|308158792|gb|EFO61357.1| Deoxynucleoside kinase [Giardia lamblia P15] Length = 251 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 28/194 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FIS G+ GAGKTT L + + V+ EP F Sbjct: 31 MFISISGLIGAGKTTLAEELA---KEMGFPVYY--EPVEDNI--YLEDFYKDMKTYGFPM 83 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQHLFLD 118 + + R + +I G+ + DR + D+ +A QG + Sbjct: 84 QVYLLN---KRYQQHQQIIW----SGEGAVQDRSIYEDAVFARILVKQGNMSKRDYKTYT 136 Query: 119 SL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L +S P+ I LD+ + L+R++ R ES + + + Sbjct: 137 DLYNNMSKYLTHPNFLIHLDVTPEESLERIKERSRNCESGIP-------LSYLQDLYDEY 189 Query: 178 LDIARNQPDRCHIV 191 R ++ Sbjct: 190 NIFLAEISKRIPVI 203 >gi|299133986|ref|ZP_07027179.1| hypothetical protein AfiDRAFT_2308 [Afipia sp. 1NLS2] gi|298590733|gb|EFI50935.1| hypothetical protein AfiDRAFT_2308 [Afipia sp. 1NLS2] Length = 510 Score = 63.5 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 48/242 (19%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR--HVLL----- 55 G+ ++ G++G+GK+T ++ + +L + + + G + R ++L Sbjct: 285 GGMIVAIVGVDGSGKSTAVTTIHEWLGSEIDTIPMYFGTGDGRPSLLLRPFKMMLPLIAS 344 Query: 56 -------SCGVDEFGAEAEAIVFAAAR---LDHVENVIRPAL-------MEGKILLCDRF 98 +++ V R L G I+L DR+ Sbjct: 345 ALKTRPKGASHGAMSHREPGFLYSVLLTVWALVVAREKRNKLVSARRGANRGLIVLTDRY 404 Query: 99 LDSSYAYQGERDSSQHLFL--DSLQEISV------QEVMPDCTIILDLPVDIGLKRVQNR 150 + + + L+ + Q + PD I L + + L R Sbjct: 405 PQNQTPSFNDGPLLNRVPRAPRWLRRLEASAYLLAQRLPPDLVIKLQVTPETALLR---E 461 Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + S + + E R R +D+ V I + +W+ Sbjct: 462 PDMDPSIVRERITTLRHLTFEAR-------------RVVTIDAEQPLPDVIRRIKSEIWD 508 Query: 211 LV 212 L+ Sbjct: 509 LL 510 >gi|169616051|ref|XP_001801441.1| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15] gi|160703101|gb|EAT81696.2| hypothetical protein SNOG_11197 [Phaeosphaeria nodorum SN15] Length = 105 Score = 63.1 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 42/99 (42%), Gaps = 11/99 (11%) Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+ ++ V PD + LD+ D KR + +E+K + ++ R++ Sbjct: 3 LEWCRKPDVGLPRPDLCVFLDISADDAAKR--------GGYGTEKYEKK--EMQDRVREL 52 Query: 177 FLDIA-RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 F + R + + +D+ S + V + + V +++ Sbjct: 53 FETLMGRKEGEDFVRIDAGASLEEVQKKVKHEVDRCIER 91 >gi|196000705|ref|XP_002110220.1| hypothetical protein TRIADDRAFT_53995 [Trichoplax adhaerens] gi|190586171|gb|EDV26224.1| hypothetical protein TRIADDRAFT_53995 [Trichoplax adhaerens] Length = 311 Score = 63.1 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 62/192 (32%), Gaps = 37/192 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N+ IS EG GAGKTT + + L Y V EP A S Sbjct: 34 NTAKIISVEGNIGAGKTTLANNIGEIL---GYKVFY--EPVNQNPYLA--KFYESPKDYA 86 Query: 62 FGAEAEA----IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------- 109 F + + L H L G+ ++ DR + S + Sbjct: 87 FKLQLWIYRQRFLIYCNALQHY-------LSTGQGVILDRSVYSDRVFAKTGNNDGFISS 139 Query: 110 -DSSQHLFLDS--LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYF 162 + Q+ L L + + P + L + L+RV+ R + E + L Sbjct: 140 TEYDQYELLRQQLLNRV----IPPHLLVYLHVSPTDCLERVRKRGRIYEKSISTSYLQKL 195 Query: 163 ERKDVMIHEKRR 174 E + E+ R Sbjct: 196 EDEFDNFVEEMR 207 >gi|114332254|ref|YP_748476.1| deoxynucleoside kinase [Nitrosomonas eutropha C91] gi|114309268|gb|ABI60511.1| deoxynucleoside kinase [Nitrosomonas eutropha C91] Length = 214 Score = 63.1 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 54/178 (30%), Gaps = 18/178 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG GAGKT+ + L + +P P E + Sbjct: 7 RYIVVEGPVGAGKTSLARNMATRLNCS----LMLEQPEANPFLEKFYE-----DTPRYAL 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122 + R + ++ D + + S L ++ Sbjct: 58 STQLFFLLQRRHQLQLMRQENGFSQS--VVSDFLFEKGQLFAAVALSEPEHGLYRQICEQ 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF----ERKDVMIHEKRRQ 175 + + PD I L + ++ +KR++ R + E DY ER HE R Sbjct: 116 MPLDAPAPDLVIYLQVSPEVLIKRIRQRGNTLEQNISEDYLRRLAERYMQFFHEYDRA 173 >gi|228898773|ref|ZP_04063057.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222] gi|228860865|gb|EEN05241.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222] Length = 211 Score = 63.1 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRITLRGREFEKN 149 >gi|229170869|ref|ZP_04298474.1| Deoxyguanosine kinase [Bacillus cereus MM3] gi|228612604|gb|EEK69821.1| Deoxyguanosine kinase [Bacillus cereus MM3] Length = 211 Score = 63.1 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKAISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R +E++ L + K ++ D + + + + ++ D + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIF--ASRTLKNSQYDKYMQIYR 113 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 I Q+ +P+ + L ++ R+ R E Sbjct: 114 ILTQDMPVPNVIVYLTASLETLQTRIAMRGREFEKN 149 >gi|229015422|ref|ZP_04172425.1| Deoxyguanosine kinase [Bacillus cereus AH1273] gi|229021627|ref|ZP_04178215.1| Deoxyguanosine kinase [Bacillus cereus AH1272] gi|228739673|gb|EEL90081.1| Deoxyguanosine kinase [Bacillus cereus AH1272] gi|228745864|gb|EEL95863.1| Deoxyguanosine kinase [Bacillus cereus AH1273] Length = 211 Score = 63.1 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLDQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|167635088|ref|ZP_02393405.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0442] gi|170688921|ref|ZP_02880123.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0465] gi|254686608|ref|ZP_05150467.1| deoxyguanosine kinase [Bacillus anthracis str. CNEVA-9066] gi|254744202|ref|ZP_05201883.1| deoxyguanosine kinase [Bacillus anthracis str. Kruger B] gi|167529562|gb|EDR92312.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0442] gi|170667145|gb|EDT17906.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0465] Length = 211 Score = 63.1 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ +R+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQRRIAMRGREFEKN 149 >gi|30260209|ref|NP_842586.1| deoxynucleoside kinase family protein [Bacillus anthracis str. Ames] gi|47525271|ref|YP_016620.1| deoxynucleoside kinase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49183054|ref|YP_026306.1| deoxynucleoside kinase family protein [Bacillus anthracis str. Sterne] gi|49476693|ref|YP_034375.1| deoxyguanosine kinase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|165873230|ref|ZP_02217841.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0488] gi|170707564|ref|ZP_02898017.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0389] gi|177655685|ref|ZP_02937010.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0174] gi|190569333|ref|ZP_03022225.1| deoxynucleoside kinase family protein [Bacillus anthracis Tsiankovskii-I] gi|196036364|ref|ZP_03103761.1| deoxynucleoside kinase family protein [Bacillus cereus W] gi|196041975|ref|ZP_03109262.1| deoxynucleoside kinase family protein [Bacillus cereus NVH0597-99] gi|218901221|ref|YP_002449055.1| deoxynucleoside kinase family protein [Bacillus cereus AH820] gi|225862072|ref|YP_002747450.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB102] gi|227812693|ref|YP_002812702.1| deoxynucleoside kinase family protein [Bacillus anthracis str. CDC 684] gi|228912758|ref|ZP_04076407.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228925273|ref|ZP_04088371.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931522|ref|ZP_04094430.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228943826|ref|ZP_04106213.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229089152|ref|ZP_04220435.1| Deoxyguanosine kinase [Bacillus cereus Rock3-42] gi|229119682|ref|ZP_04248945.1| Deoxyguanosine kinase [Bacillus cereus 95/8201] gi|229602573|ref|YP_002864671.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0248] gi|254724161|ref|ZP_05185946.1| deoxyguanosine kinase [Bacillus anthracis str. A1055] gi|254737004|ref|ZP_05194709.1| deoxyguanosine kinase [Bacillus anthracis str. Western North America USA6153] gi|254751193|ref|ZP_05203232.1| deoxyguanosine kinase [Bacillus anthracis str. Vollum] gi|254761663|ref|ZP_05213681.1| deoxyguanosine kinase [Bacillus anthracis str. Australia 94] gi|301051756|ref|YP_003789967.1| deoxyguanosine kinase [Bacillus anthracis CI] gi|30253530|gb|AAP24072.1| deoxynucleoside kinase family protein [Bacillus anthracis str. Ames] gi|47500419|gb|AAT29095.1| deoxynucleoside kinase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49176981|gb|AAT52357.1| deoxynucleoside kinase family protein [Bacillus anthracis str. Sterne] gi|49328249|gb|AAT58895.1| deoxyguanosine kinase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164711028|gb|EDR16594.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0488] gi|170127560|gb|EDS96434.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0389] gi|172080025|gb|EDT65125.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0174] gi|190559555|gb|EDV13548.1| deoxynucleoside kinase family protein [Bacillus anthracis Tsiankovskii-I] gi|195990994|gb|EDX54965.1| deoxynucleoside kinase family protein [Bacillus cereus W] gi|196027230|gb|EDX65850.1| deoxynucleoside kinase family protein [Bacillus cereus NVH0597-99] gi|218537695|gb|ACK90093.1| deoxynucleoside kinase family protein [Bacillus cereus AH820] gi|225789020|gb|ACO29237.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB102] gi|227007000|gb|ACP16743.1| deoxynucleoside kinase family protein [Bacillus anthracis str. CDC 684] gi|228663773|gb|EEL19350.1| Deoxyguanosine kinase [Bacillus cereus 95/8201] gi|228694175|gb|EEL47855.1| Deoxyguanosine kinase [Bacillus cereus Rock3-42] gi|228815850|gb|EEM62084.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228828140|gb|EEM73866.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834387|gb|EEM79926.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228846885|gb|EEM91888.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266981|gb|ACQ48618.1| deoxynucleoside kinase family protein [Bacillus anthracis str. A0248] gi|300373925|gb|ADK02829.1| deoxyguanosine kinase [Bacillus cereus biovar anthracis str. CI] gi|324324009|gb|ADY19269.1| deoxynucleoside kinase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 211 Score = 63.1 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ +R+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQRRIAMRGREFEKN 149 >gi|229077292|ref|ZP_04209975.1| Deoxyguanosine kinase [Bacillus cereus Rock4-2] gi|228706015|gb|EEL58320.1| Deoxyguanosine kinase [Bacillus cereus Rock4-2] Length = 211 Score = 63.1 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD---SLQE 122 E + F R +E++ L + K ++ D + + + + + D + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIF--ASRTLKDSQYDKYMQIYR 113 Query: 123 ISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 I +Q+ +P+ + L ++ KR+ R E Sbjct: 114 ILIQDMPVPNVIVYLTASLETLQKRIAMRGREFEKN 149 >gi|238788255|ref|ZP_04632049.1| hypothetical protein yfred0001_6980 [Yersinia frederiksenii ATCC 33641] gi|238723501|gb|EEQ15147.1| hypothetical protein yfred0001_6980 [Yersinia frederiksenii ATCC 33641] Length = 220 Score = 62.7 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 56/164 (34%), Gaps = 27/164 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 M LFIS +G +G GKTT + + + L+ N V E P + + Sbjct: 1 MTPPLFISLDGPKGVGKTTLLEAITKELRADNKKVIRLCEKKSDPYRRETMALVNRLARN 60 Query: 57 CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 +D E FA +R HV P G I+L DR+ S A+ R Sbjct: 61 PSLDLERQVCER--FADSRAWISRHVLTKQPP----GSIILMDRWYPSDAAF---RRMVP 111 Query: 114 HLFLDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS 152 + L I +PD T DI R R Sbjct: 112 FADILQLN-IERNVRVPDLHVGVVT-----APDISWARASARTR 149 >gi|185135884|ref|NP_001117091.1| thymidylate kinase [Salmo salar] gi|145320997|gb|ABP63530.1| thymidylate kinase [Salmo salar] Length = 415 Score = 62.7 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 34/214 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++ GK+T L L + + P + AR D Sbjct: 222 IVIEGLDATGKSTLTESLTEAL-----GATLLKSPPQCLSPWRAR-------FDTEPPLI 269 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-----GERDSSQHLFLDSLQ 121 +A + + A ++ DR+ S+ AY G + + + Sbjct: 270 RRAFYALGNYLTAGQIGQEARQAP--VIVDRYWHSTAAYAIATAVGGKLGNLPQAGSEVY 327 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVM----IHEKRRQI 176 + P V + Q R + D E +++ +K + Sbjct: 328 GWPGDLLRP-------SLVLMLSLSSQERMRRLQVRGQDKTMEEEELEANHLFRQKVEEA 380 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + P C VD++ S V +L ++ E Sbjct: 381 YQRV--GGPA-CITVDASPSPDQVLQQVLLLIRE 411 >gi|196047686|ref|ZP_03114890.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB108] gi|229182414|ref|ZP_04309667.1| Deoxyguanosine kinase [Bacillus cereus BGSC 6E1] gi|196021471|gb|EDX60174.1| deoxynucleoside kinase family protein [Bacillus cereus 03BB108] gi|228601060|gb|EEK58627.1| Deoxyguanosine kinase [Bacillus cereus BGSC 6E1] Length = 211 Score = 62.7 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNVIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L ++ +R+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQRRIALRGREFEKN 149 >gi|83319354|ref|YP_424499.1| hypothetical protein MCAP_0527 [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283240|gb|ABC01172.1| conserved hypothetical protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 214 Score = 62.7 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 32/222 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT + LK+ L +K V+ T P A D Sbjct: 3 IAIFGTTGAGKTTLLENLKKLLDKKYVFVNETS--LDCPYFNKAYD---DSNSDVQDYNY 57 Query: 67 EA-IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD---SSQHLFLDSLQE 122 + + R ++ I+ + ++ DR + S + + ++ Sbjct: 58 KLDLWMLTDR---MKTFIK--YKNHQNVIYDRSILDSMVFSQTDHMYNRLDDRDYNVFKD 112 Query: 123 ISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + ++P D I L + ++R+ R E D F + Sbjct: 113 YFLTCILPNIFDCQTNNKIFDIVIYLKVEPQKAIRRINKRSRDVELDTNDLFWLNLTKAY 172 Query: 171 EKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211 E I+ ++ P ++D+ +A I N + ++ Sbjct: 173 EFWYDIYKEVI---P--FWVIDANVDDPNYIANMIANKIKDV 209 >gi|297480629|ref|XP_002691535.1| PREDICTED: UMP-CMP kinase 2-like [Bos taurus] gi|296482367|gb|DAA24482.1| UMP-CMP kinase 2-like [Bos taurus] Length = 447 Score = 62.7 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 54/229 (23%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I EG++ GKTT + L+ V + P Sbjct: 246 QKGRFPVIVIEGLDATGKTTVTQSVSDSLKA----VLLKSPPSCISQWRKI--------F 293 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LD 118 D+ ++ + + + ++ DR+ S+ Y + S L L Sbjct: 294 DDEPTIIRRAFYSLGNYIVASEIAKESTKSP--VVVDRYWHSTATYAIATEVSGGLQHLP 351 Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160 + Q D + + ++R++ R + E+ + Sbjct: 352 PIHHPIYQWPR-------DLLKPDLILLLTVSPEERMQRIEGRGMEKTREEAELETNSI- 403 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S + V +L+++ Sbjct: 404 --------FRQKVEVCYQRM--ENPG-CHVVDASPSREKVLQMVLSVIQ 441 >gi|159116708|ref|XP_001708575.1| Deoxynucleoside kinase [Giardia lamblia ATCC 50803] gi|157436687|gb|EDO80901.1| Deoxynucleoside kinase [Giardia lamblia ATCC 50803] Length = 251 Score = 62.7 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 28/194 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FIS G+ GAGKTT L + + V+ EP F Sbjct: 31 MFISISGLIGAGKTTLAEELA---KEMGFPVYY--EPVEDNI--YLEDFYKDMKTYGFPM 83 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQHLFLD 118 + + R + +I G+ + DR + D+ +A QG + Sbjct: 84 QVYLLN---KRYQQHQQIIW----SGEGAVQDRSIYEDAVFARILVKQGNMSKRDYKTYT 136 Query: 119 SL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L +S P+ I LD+ + L+R++ R E+ + + + Sbjct: 137 DLYNNMSKYLTHPNFLIHLDVTPEESLERIKERSRNCEAGIP-------LSYLQDLYDEY 189 Query: 178 LDIARNQPDRCHIV 191 R ++ Sbjct: 190 NIFLAEISKRIPVI 203 >gi|297460075|ref|XP_001252651.2| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Bos taurus] Length = 447 Score = 62.7 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 54/229 (23%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I EG++ GKTT + L+ V + P Sbjct: 246 QKGRFPVIVIEGLDATGKTTVTQSVSDSLKA----VLLKSPPSCISQWRKI--------F 293 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LD 118 D+ ++ + + + ++ DR+ S+ Y + S L L Sbjct: 294 DDEPTIIRRAFYSLGNYIVASEIAKESTKSP--VVVDRYWHSTATYAIATEVSGGLQHLP 351 Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160 + Q D + + ++R++ R + E+ + Sbjct: 352 PIHHPIYQWPR-------DLLKPDLILLLTVSPEERMQRIEGRGMEKTREEAELETNSI- 403 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S + V +L+++ Sbjct: 404 --------FRQKVEVCYQRM--ENPG-CHVVDASPSREKVLQMVLSVIQ 441 >gi|228963117|ref|ZP_04124288.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228796573|gb|EEM44010.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar sotto str. T04001] Length = 178 Score = 62.7 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 12/153 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 + +P+ + L ++ KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLETLQKRIALRGREFEK 148 >gi|195112580|ref|XP_002000850.1| GI10455 [Drosophila mojavensis] gi|193917444|gb|EDW16311.1| GI10455 [Drosophila mojavensis] Length = 410 Score = 62.4 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 76/228 (33%), Gaps = 28/228 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 I EG AGKT L L + Y P R + Sbjct: 86 KVICVEGPIAAGKTKFAMELAAELDMQYYPAVDMDLIYINPYGYDMRKLDPELPPSCRSY 145 Query: 54 -LLSCGVDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---- 105 + + D A A ++ +V + ++ L G+ ++ +R S + + Sbjct: 146 DIKNFCADPKHPSAAAFQIRMYMLRFSQYV-DALQHILSTGQGVVTERSPFSDFVFMEAM 204 Query: 106 --QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 QG + +++ ++ E+ P I LD+PVD+ K+++ R E F Sbjct: 205 FRQGYISRGARSVYNDVRQNTIGELLKPHLVIYLDVPVDVVQKQIKARNLEHEVKSK-VF 263 Query: 163 ERKDVMIHEKRR-QIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + E Q +L + I D + + V +I I Sbjct: 264 SNAYLTDLEVIYKQQYLKDIAGHAE-LLIYDWSAGGETEVVVEDIERI 310 >gi|297182349|gb|ADI18516.1| deoxynucleoside kinases [uncultured gamma proteobacterium HF4000_19M20] Length = 229 Score = 62.4 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 70/207 (33%), Gaps = 35/207 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EG G GKTT LL Y++ + + A+ + A Sbjct: 16 KFIAVEGPIGVGKTTLAQLLADSF---GYEIFLEKPAENPFLADFYK-------NPSKNA 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKI---L-LCDRFL---DSSYAYQGERDSSQHLFL 117 A + F R+ ++ L + I + + D FL D +A D L+ Sbjct: 66 LATQLFFLFQRVKQIQE-----LEQDDIFFPVRISD-FLLDKDKLFAKATLSDQELALYE 119 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFE--RKDV-MIHEK- 172 +S+ + PD I L RV R E LDY + + K Sbjct: 120 QIYSYLSLNLLTPDLVIYLQAESKTLFDRVIQRGVDIEKNITLDYLDILNESYKEFFLKY 179 Query: 173 -------RRQIFLDIARNQPDRCHIVD 192 FLD+ N+ D I+D Sbjct: 180 DRSPVLIVNSDFLDLVNNKNDYILILD 206 >gi|291238600|ref|XP_002739202.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10-like [Saccoglossus kowalevskii] Length = 372 Score = 62.4 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 21/185 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAE-------AARH 52 I +G AGKTT L + + + D + R+ G + + Sbjct: 77 KIIVIDGNIAAGKTTLGQKLAKELGMYYFPEASLD-YFDRQSGDGKRLDPKFTGNVSLER 135 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106 ++ + +V R + + L G+ ++ DR + S + + Sbjct: 136 FYKDPKAEDGHSFRLQVVMYMIRYLTYCDAMNHLLTTGEGVILDRSVYSDFVFLEAITTA 195 Query: 107 GERDSSQHLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLD-YFER 164 G + + L+ IS+ V+P I LD P+D+ KR++ R E D Y E Sbjct: 196 GLIRKQCYDYYQELKGISLWRVLPPHLVIYLDAPLDVVKKRIKERGIPYEQTIDDSYLES 255 Query: 165 KDVMI 169 D Sbjct: 256 IDRAY 260 >gi|149037468|gb|EDL91899.1| deoxythymidylate kinase (predicted), isoform CRA_a [Rattus norvegicus] Length = 80 Score = 62.4 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L L + + R P + L + Sbjct: 4 RRGALIVLEGVDRAGKTTQCLRLVTALCASGHRAELLRFPERSTEIGKLLSSYLEKKTE- 62 Query: 62 FGAEAEAIVFAAARLDHV 79 + ++F+A R + V Sbjct: 63 LEDHSVHLLFSANRWEQV 80 >gi|145481693|ref|XP_001426869.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393946|emb|CAK59471.1| unnamed protein product [Paramecium tetraurelia] Length = 236 Score = 62.4 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 39/216 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDEFG 63 IS EG G+GK+T + L +Q+K +H EP + LL + Sbjct: 16 LISIEGNIGSGKSTLLKL----MQQKYPQMHYLPEPVNEWQQINGNPKLNLLGSFYQDPH 71 Query: 64 AEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRFLDS---SYAYQGERDSSQHL--- 115 A + A RL H + V+ A + I+L +R + + +A G + + Sbjct: 72 RWAYTMQNYAFYSRLKHWKTVM--AYLNQSIILSERSIQADKEIFAKNGYINGLMNEMEF 129 Query: 116 -----FLDSL------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYF 162 F D L ++I+ Q + L + ++ L+R+ R E + DY Sbjct: 130 AIYEQFYDWLVQEVFGKQIAKQ-----LIVYLQVNPNVCLERMLKRSRDEEKNSISKDYL 184 Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198 V IH++ + +L A++Q + I++ F+ Sbjct: 185 ----VQIHQR-HEEWLINAKDQNQKVLILNGDKEFE 215 >gi|157819837|ref|NP_001101487.1| UMP-CMP kinase 2, mitochondrial [Rattus norvegicus] gi|149051032|gb|EDM03205.1| thymidylate kinase family LPS-inducible member (predicted) [Rattus norvegicus] Length = 417 Score = 62.4 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 72/225 (32%), Gaps = 40/225 (17%) Query: 1 MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 + G F I+ EG++ GKTT + LQ V + P L Sbjct: 217 IQKGKFQVIAIEGLDATGKTTLTQSVSESLQA----VLLQSPPPCISQWRK-----LFDD 267 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FL 117 A F + V + I ++ DR+ S+ Y + S L +L Sbjct: 268 EPTIIRRA----FYSLGNYLVASEIAKQ-SAKFPVIVDRYWHSTATYAIATEVSGGLQYL 322 Query: 118 DSLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKD 166 Q D + + ++R+Q R + + E Sbjct: 323 PPAHHPVYQWPR-------DLLKPDLVLLLTVNSEERVRRLQGRGQEKTKEEAE-LEVNS 374 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 V +K + + P C +VD++ S ++V +L ++ Sbjct: 375 V-FRQKVEATYQRM--ENPS-CRLVDASPSRETVLQTVLQLIQRA 415 >gi|224048693|ref|XP_002196001.1| PREDICTED: similar to thymidylate kinase family LPS-inducible member [Taeniopygia guttata] Length = 241 Score = 62.0 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 54/230 (23%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I FEG++ GKTT +K L + R P + Sbjct: 41 KKGSFPVIVFEGLDATGKTTVTQAVKDALNG-----ILLRSPPACISQWRTVF------D 89 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-LFLD 118 DE A +AA + + + ++ DR+ S+ AY ++ L Sbjct: 90 DEPTPIKRAF-YAAGNYILASEIAKASTQAP--VIIDRYWHSTAAYAIATETIGKVQDLP 146 Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160 +Q+ Q D + + ++R+Q+R + E+ L Sbjct: 147 PVQDEVYQWPE-------DLLKPDLVLLLTVDPEERVRRLQHRGLEKTKEEAELEANSL- 198 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + + + P C VD++ S + V +L ++ + Sbjct: 199 --------FRQSVEESYKRMV--NP-VCQEVDASPSKEEVLKTVLQLIKK 237 >gi|297539333|ref|YP_003675102.1| deoxynucleoside kinase [Methylotenera sp. 301] gi|297258680|gb|ADI30525.1| deoxynucleoside kinase [Methylotenera sp. 301] Length = 215 Score = 62.0 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 33/226 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G GKTT +L P + A+ L Sbjct: 9 YIVVEGPIGCGKTTLAKMLADKFPVDYLSEKAEANPFLPRFYQDAQRYALPTQ------- 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123 + F R + ++++ + + K ++ D FL D +A D L+ + Q + Sbjct: 62 ---LFFLFQRANQMKDLSQRDMFA-KPIIADFFLEKDPIFARLNLDDEEYALYHNIYQHL 117 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD I L P+D ++R++ R E R+ +A Sbjct: 118 QLKAPKPDLVIYLQTPIDALMERIEERSVTYEQDIP--------------REYIERLANA 163 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVW-----ELVQKRVSPLSSKKD 224 + H D++ V LN++ EL+ R+ + +++ Sbjct: 164 YSEFFHNYDAS-PVLIVNNEKLNVLKNEDALELLLNRIMQIKGQRE 208 >gi|326916472|ref|XP_003204531.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Meleagris gallopavo] Length = 267 Score = 62.0 bits (150), Expect = 5e-08, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 68/237 (28%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F + FEG++ GKTT +K L V + P Sbjct: 67 RKGEFPVVVFEGLDATGKTTVTQSVKDALGA----VLLRSPPVCISQWRTI-------FD 115 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E A +AA + + + ++ DR+ S+ AY ++ Sbjct: 116 EEPTPIRRAF-YAAGNYILASEIAKASTQAP--VIVDRYWHSTAAYTIATETDG------ 166 Query: 120 LQEISVQEVMPDCTIILD-------------------LPVDIGLKRVQNRYSLR------ 154 ++Q + PD D + + +R++ R R Sbjct: 167 ----NIQNLPPDH----DAVYKWPEDLLKPDLVLLLTVNPEERARRLEGRGLERTKEEAE 218 Query: 155 -ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 E+ L ++ + + + P C VD++ S + V +L ++ + Sbjct: 219 LEANSL---------FRQRIEESYRRMV--NPA-CQEVDASPSKEEVFKTVLQLIKK 263 >gi|312221623|emb|CBY01563.1| hypothetical protein [Leptosphaeria maculans] Length = 106 Score = 62.0 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 33/106 (31%), Gaps = 31/106 (29%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------------------ 42 M G I FEG++ AGK+T + L L+ V R PG Sbjct: 1 MPRGRLIVFEGLDRAGKSTQCAKLVADLRNDGRVVRHLRFPGMFSLAFIVGWQRKVDVWD 60 Query: 43 -----------GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLD 77 T + L G E ++F+A R + Sbjct: 61 FHGKKRKKECITTRIGQMIDSYL--SGQSEQEDHVIHLLFSANRWE 104 >gi|222152094|ref|YP_002561254.1| deoxypurine kinase homolog [Macrococcus caseolyticus JCSC5402] gi|222121223|dbj|BAH18558.1| deoxypurine kinase homolog [Macrococcus caseolyticus JCSC5402] Length = 199 Score = 62.0 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 77/214 (35%), Gaps = 30/214 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ EG G GK++ L L V P + E D++ Sbjct: 4 LFIAIEGPIGVGKSSLTKKLSATLNLTPIYEIVEENPFLSDFYEDI---------DKWSF 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123 + E + F R + L + D + + + + + + + + +I Sbjct: 55 QTE-MFFLCNRY-----KVLTELSNDISAVSDYHILKNKVFANNTLNEKEYRMFEDIYDI 108 Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +EV PD T+ L +++ +R+Q R ES D + K + + + + Sbjct: 109 LTREVRNPDITVFLTADLEVLKQRIQLRNRDFESHIEDDYLIKLTEDYRRVYE-----SM 163 Query: 183 NQPDRCHIVDSA--------HSFQSVATNILNIV 208 + ++D++ ++ + I +I+ Sbjct: 164 KHDHQTLLIDTSDMDFVNNAADYEHIVQQIKDII 197 >gi|194018056|ref|ZP_03056661.1| deoxyguanosine kinase [Bacillus pumilus ATCC 7061] gi|194010248|gb|EDW19825.1| deoxyguanosine kinase [Bacillus pumilus ATCC 7061] Length = 207 Score = 62.0 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKTT ++L + Q V P E ++++ + Sbjct: 6 FIAVEGPIGAGKTTLATMLAKEFQFPLVKEIVEENPFLDKFYE---------DMEQWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E + F R +E++ + + + ++ D + + + + +D ++I Sbjct: 57 LE-MFFLCNRFKQLESIQENYVNQQQPIVTDYHVYKNMIF--AERTLSKKHMDKYRKIYH 113 Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 P+ I + + L+R+Q R E Sbjct: 114 LLTDDLPKPNAIIYIKASLPTLLERIQMRGRSFEED 149 >gi|260828376|ref|XP_002609139.1| hypothetical protein BRAFLDRAFT_131374 [Branchiostoma floridae] gi|229294494|gb|EEN65149.1| hypothetical protein BRAFLDRAFT_131374 [Branchiostoma floridae] Length = 463 Score = 62.0 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 63/230 (27%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++ GKTT L + L P RH+ + F ++ Sbjct: 263 IVLEGLDATGKTTLTERLGKMLSA----------PVLQSPPLPIRHL-----REVFDSQP 307 Query: 67 EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQ-----GERDSSQHLFL--- 117 E I A L + ++ A ++ DRF S+ AY G D SQ Sbjct: 308 ELIRRAYYTLGNYILAMQVAEEAQTHPVVIDRFWHSTTAYSIATEVGCGDESQLPPRGHS 367 Query: 118 ----------------DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + E S R+ R + + Sbjct: 368 VYTWPSDLLKPQLALLLMVNETSRG------------------ARLAGRGMGKTEEEI-R 408 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 E+ ++ ++ + +L + P ++D++ S + V + + ++ + Sbjct: 409 LEK-SLLFRKRLVEAYLRM--ENPG-LKVIDASGSKEEVFASTVQVLKDF 454 >gi|33391177|gb|AAQ17206.1| NADH-ubiquinone oxidoreductase 42 kDa subunit [Branchiostoma belcheri tsingtauense] Length = 368 Score = 62.0 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 22/180 (12%) Query: 12 IEG---AGKTTHISLLKRFLQRKNY---DVH-VTREPGGTPAAEA-------ARHVLLSC 57 I+G GKTT L L K + DVH R G + + Sbjct: 75 IDGNLAVGKTTLGKELGEKLGMKYFPEVDVHYFDRFEGDGSPMDKRFSGNVSLEDYYKNP 134 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--- 114 + + +V R + + G+ ++ DR + S + + ++ Sbjct: 135 SDPDGHSIRFQMVMFMMRYFQFCEAMNHLIATGQGVILDRSVHSDFVFLEAMYKERYIKK 194 Query: 115 ---LFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169 + ++E + +++P I LD+P + K+++ R E L Y E D Sbjct: 195 HCYDYYYMVKEEVINKILPPHLVIYLDVPPEEVQKKIEKRGIEMEKDIPLSYLETLDDAY 254 >gi|320162237|ref|YP_004175462.1| deoxynucleoside kinase [Anaerolinea thermophila UNI-1] gi|319996091|dbj|BAJ64862.1| deoxynucleoside kinase [Anaerolinea thermophila UNI-1] Length = 218 Score = 62.0 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 62/181 (34%), Gaps = 31/181 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGV 59 M +I+ G G GK+T + LL L G P E AR+ L Sbjct: 1 MKR--YITVAGNIGVGKSTLVKLLCAKL-------------GWQPFYEPEARNPYLPDFY 45 Query: 60 DEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERD 110 A + F A RL +I L G ++ DR + ++ QG + Sbjct: 46 QNMAAWGFHSQVFFLANRLQIHRQII---LFPGS-VVQDRSVYEDAEIFAANLYRQGYLN 101 Query: 111 SSQHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVM 168 + +L + I PD I L + ++R+ R E +Y E + + Sbjct: 102 ERDYATYRALYQGIVEFLPPPDLVIYLRARPETLMERIAQRNREYERGISREYLEALNDL 161 Query: 169 I 169 Sbjct: 162 Y 162 >gi|270262671|ref|ZP_06190942.1| hypothetical protein SOD_c02920 [Serratia odorifera 4Rx13] gi|270043355|gb|EFA16448.1| hypothetical protein SOD_c02920 [Serratia odorifera 4Rx13] Length = 220 Score = 62.0 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 58/172 (33%), Gaps = 21/172 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59 M+ LF+S +G +GAGKTT + + + L+ N V + + E L++ Sbjct: 1 MSRQLFVSLDGPKGAGKTTLLEAITKVLRADNKKVVRLCEKKSDPYRGETM--ALVNKLA 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLF 116 E V D + R L + I+L DR+ S A+ R Sbjct: 59 RNPSQALELEV-CERFADSRAWISRHVLTKQPPDSIILMDRWYPSDAAF---RRMVPFAE 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + L I MPD T + R R S + E Sbjct: 115 ILQLN-IERNVRMPDLHVGVVT-----APETSWARAAARPRGLSSTVIYKLE 160 >gi|322832365|ref|YP_004212392.1| hypothetical protein Rahaq_1645 [Rahnella sp. Y9602] gi|321167566|gb|ADW73265.1| hypothetical protein Rahaq_1645 [Rahnella sp. Y9602] Length = 205 Score = 61.6 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 43/175 (24%), Positives = 58/175 (33%), Gaps = 27/175 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 M+ LFIS +G +G GKTT + + + L+ N V E P + + Sbjct: 1 MSRPLFISLDGPKGVGKTTLLEAMTKVLRADNKKVVRLCEKKSDPYRRETMALVNRLARN 60 Query: 57 CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 D E FA +R HV P I+L DR+ S A+ R Sbjct: 61 PARDLELEVCER--FADSRAWISRHVLTKQPP----DSIILMDRWYPSEAAF---RRMVP 111 Query: 114 HLFLDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + L I MPD T DI R R S + E Sbjct: 112 FAEILQLN-IERNVRMPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKLE 160 >gi|313498682|gb|ADR60048.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 205 Score = 61.6 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 32/224 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 MN LFISF+G +G GKTT + + + L+ V E P H+ S Sbjct: 1 MNRPLFISFDGPKGTGKTTLLEAVTQALRLDGIKVIRLCERKNDPHRGETMALVNHLSRS 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D E FA +R + + P I+L DR+ S A+ R + Sbjct: 61 PCQDLEFKVCER--FAESRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDK 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERK---DVM 168 + L + +PD T + R R S + + + Sbjct: 115 ILRLN-LERNVQVPDLHVGVVT-----KPETSWARAAARTRGLGSTVIHNLDEQVACTEA 168 Query: 169 IHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211 + + RN+ VD + V I ++ L Sbjct: 169 FERAVAEQGWVLCRNEG----TVDEATR---QVVREIQGVLRHL 205 >gi|194743064|ref|XP_001954020.1| GF18063 [Drosophila ananassae] gi|190627057|gb|EDV42581.1| GF18063 [Drosophila ananassae] Length = 407 Score = 61.6 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 73/227 (32%), Gaps = 26/227 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 I EG AGKT L L K Y R + Sbjct: 83 KVICVEGPIAAGKTKFAEELADELDMKYYPAVDLDLIFVNAYGYDMRQLDPQLPPSCRSY 142 Query: 54 ----LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---- 105 L + A+ + ++ R + ++ L G+ ++ +R S + + Sbjct: 143 DVKNFLKDPNHDLAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAM 201 Query: 106 --QGERDSSQHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 QG + L+E + + P I LDLPVD K+++ R E + Sbjct: 202 FRQGYLSRGARSVYNELRENTISELLKPHLVIYLDLPVDAVKKQIKARNIGYEVESKVFS 261 Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + + + +Q +L + I D + + V +I I Sbjct: 262 DAYLRDLEQLYKQQYLKDIATHAE-LLIYDWTAGGETEVVVEDIERI 307 >gi|114576207|ref|XP_515282.2| PREDICTED: hypothetical protein [Pan troglodytes] Length = 710 Score = 61.6 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 36/228 (15%), Positives = 73/228 (32%), Gaps = 54/228 (23%) Query: 3 SGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 G F ++ EG++ GKTT + L+ V + P + R + Sbjct: 510 KGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DDEP 560 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS 119 A ++ + + + ++ DR+ S+ Y + S L L Sbjct: 561 TIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLPP 615 Query: 120 LQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLDY 161 Q D + + L+R+Q R + E+ + Sbjct: 616 AHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV-- 666 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S + V +L+++ Sbjct: 667 -------FRQKVEMSYQRM--ENPG-CHVVDASPSREKVLQTVLSLIQ 704 >gi|218232701|ref|YP_002364870.1| deoxynucleoside kinase family protein [Bacillus cereus B4264] gi|218160658|gb|ACK60650.1| deoxynucleoside kinase family protein [Bacillus cereus B4264] Length = 211 Score = 61.6 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + +Q V P E DE+ + Sbjct: 6 FITVEGPIGVGKTSLAKEISTHMQLHLLKEIVDENPFLGKFYEDI---------DEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG--ERDSSQHLFLDSLQEI 123 E + F R +E++ L + K ++ D + + + +DS ++ + + Sbjct: 57 TE-MFFLCNRYKQLEDINIKYLNQRKPVVADYHIFKNLIFASRTLKDSQYDKYMQIYRIL 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +P+ + L + KR+ R E Sbjct: 116 TQDMPVPNVIVYLTASLKTLQKRIAMRGREFEKN 149 >gi|226531794|ref|NP_001148127.1| UMP/CMP kinase1 [Zea mays] gi|195615994|gb|ACG29827.1| uridylate kinase [Zea mays] Length = 221 Score = 61.6 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 43/219 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T S + R + + T ++++ + Sbjct: 20 GGPGSGKGTQCSKIVRHF---GFTHLSAGDLLRQQVQSDTEHGAMIKNLMHEGKLVPSDI 76 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ A L G DRFL + E + + Sbjct: 77 IVRLLLTA-------------MLQSGN----DRFLVDGFPRNEENRRAYESII------- 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181 + P+ + +D P + +R+ +R R+ +D ++ + H+ + + Sbjct: 113 --GIEPELVLFIDCPREELERRILHRDQGRDDDNVDTIRKRFQVFHDSTLPVVLYYDRM- 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLS 220 + VD A S +V ++ I +L+ +V L+ Sbjct: 170 ----GKVRRVDGAKSADAVFEDVKAIFTQLLTTQVHSLT 204 >gi|59808649|gb|AAH89425.1| CMPK2 protein [Homo sapiens] Length = 441 Score = 61.6 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 74/230 (32%), Gaps = 54/230 (23%) Query: 1 MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 + G F ++ EG++ GKTT + L+ V + P + R + Sbjct: 239 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DD 289 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-L 117 A ++ + + + ++ DR+ S+ Y + S L L Sbjct: 290 EPTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHL 344 Query: 118 DSLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACL 159 Q D + + L+R+Q R + E+ + Sbjct: 345 PPAHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV 397 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S + V +L+++ Sbjct: 398 ---------FRQKVEMSYQRM--ENPG-CHVVDASPSREKVLQTVLSLIQ 435 >gi|311899730|dbj|BAJ32138.1| hypothetical protein KSE_63790 [Kitasatospora setae KM-6054] Length = 213 Score = 61.6 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 80/223 (35%), Gaps = 29/223 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+F++ +G+ +GK+T L+ L VH+ E G P R + G Sbjct: 15 RGVFVTLDGLSASGKSTVAPLVAARL----GGVHL--EDDGLPGFARMRAEV--DGAGVL 66 Query: 63 GAEAEAIVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A + +H++ R + G+ ++ + + + A + Sbjct: 67 PARLHWWLM----ANHLKSERARGLVGSGRPVVVESYFPRTVATHRAMGQ------NWPV 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD ++L++ + +R++ R + + E V + + F Sbjct: 117 GYPAGALRPDAAVLLEVDESVRRERLRVRAAGGALSDWHRREEPRVAESVRVYRAF---- 172 Query: 182 RNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223 VD + + VA ++ +V E V++ +S + Sbjct: 173 -----GLVPVDGTGRTPEQVAEAVVALVHERVRRNRPEGASSR 210 >gi|256424810|ref|YP_003125463.1| deoxynucleoside kinase [Chitinophaga pinensis DSM 2588] gi|256039718|gb|ACU63262.1| deoxynucleoside kinase [Chitinophaga pinensis DSM 2588] Length = 207 Score = 61.6 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 19/190 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG GAGKTT + L K P E F Sbjct: 4 KYITIEGNIGAGKTTLANKLSAHFGAKLILEEFADNPFLPKFYEK-------PQQYAFPL 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQE- 122 E + F A R ++++++ M +++ D S + L L + Sbjct: 57 E---LFFMAERYKQLKDMLQMQDMFSNLVISDYLFIKSLLFAKINLKEDEYNLYQKLFDI 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I+ Q + PD I L+ PV + +++R E D +++ R Sbjct: 114 INPQLIQPDLLIFLNAPVSKLQQNIKHRNRSYEQQIED-------QYLINVHDMYMQYIR 166 Query: 183 NQPDRCHIVD 192 P R ++D Sbjct: 167 QHPVRVLMLD 176 >gi|317474272|ref|ZP_07933548.1| thymidylate kinase [Bacteroides eggerthii 1_2_48FAA] gi|316909582|gb|EFV31260.1| thymidylate kinase [Bacteroides eggerthii 1_2_48FAA] Length = 211 Score = 61.6 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 81/226 (35%), Gaps = 40/226 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCG---V 59 +I G++G+GKTT I+ LK L+++ V R T A A +L Sbjct: 3 KYIIISGVDGSGKTTVINSLKDKLEQQGKTVDYIWMRYNHYTVKAMNAFARILGLSVKVH 62 Query: 60 DEFGAEAEAIVF-------------AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 ++ G E ++ + V++ ++ ++CDR+++ Sbjct: 63 NKMGNVWEHRLYKMPWFCKLYVWCSYLDNKIAQKKVMK---LKSDYVICDRWINDILIDL 119 Query: 107 GER-DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFER 164 G + L ++ TI+ + V R A LD E Sbjct: 120 GAECRFNNILDSKWYKKFH--------TIL----PQNSYQFVVIRNY---QAILDCRIEN 164 Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + R ++ +A N ++VD++ + + ++ I+ + Sbjct: 165 QANPDFPYRFALYQKLAENTE--VNVVDNSRTIEESVEQVIRILNK 208 >gi|218295701|ref|ZP_03496497.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23] gi|218243860|gb|EED10387.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23] Length = 200 Score = 61.6 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 27/218 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EG G GKTT + LL L + V P + R + Sbjct: 1 MYLAVEGPIGVGKTTLVRLLSEALGAEPLLEVVEENPFLPLFYQDRRR---------YAF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + + +P G ++ L D D +A L+L+ + Sbjct: 52 KVQVFFLLSRFRQLAPLRQKPLF--GGVVADYLLD--KDPIFASLNLEGPEWDLYLELYR 107 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E++ + PD T+ L PV + L+R+ R E D E + + Sbjct: 108 ELAPKVPPPDLTVYLRAPVPVLLERIARRGRPFEQG-------MDPAYLEALSEAYERHF 160 Query: 182 RNQPDRCHIVDSAH---SFQSVATN-ILNIVWELVQKR 215 P ++++ S ++ +V E + ++ Sbjct: 161 ARYPHPLLVLEADALDFSPTGPHREAVVALVREHLAQK 198 >gi|149918076|ref|ZP_01906569.1| hypothetical protein PPSIR1_41789 [Plesiocystis pacifica SIR-1] gi|149821081|gb|EDM80487.1| hypothetical protein PPSIR1_41789 [Plesiocystis pacifica SIR-1] Length = 174 Score = 61.6 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 25/183 (13%) Query: 42 GGTPAAEAARHVLLSCGVDEFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRF 98 + R ++ D A + FAA+R I AL G+ ++ DR+ Sbjct: 3 TPSSTLRKLRPAIIDDLKDSQEARQLFYLSTVFAASRA------IERALTSGESIVIDRY 56 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 S+ AY R S+ +D+L+ T+ +D P+ I KRVQ R + + Sbjct: 57 FLSTQAYAEFRGSNLR--VDTLERRLTPAT---LTVYVDAPLAIRRKRVQTRGASPADSE 111 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQP---DRCHIVDS-AHSFQSVATNILNIVWELVQK 214 R+ + R+ L I R + ++DS HS +L + + + Sbjct: 112 T--LTREADA---RLRE--LHIQRRELSVVGNFVVIDSDTHSIDECVERVLEALDTTLTQ 164 Query: 215 RVS 217 R S Sbjct: 165 RAS 167 >gi|126314359|ref|XP_001376325.1| PREDICTED: similar to ubiquitin specific proteinase 40 [Monodelphis domestica] Length = 1612 Score = 61.6 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 24/176 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL--------------QRKNYDVHVTREPGGTPAA 47 N I+ EG GK+ L L + ++ E GG + Sbjct: 1312 NKSKVITVEGNVCTGKSDLAKDLAEKLGLRHFPEADIHYAEKTSGDGSILSPELGGNCSL 1371 Query: 48 EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-- 105 E ++ + A RL + + L G+ ++ +R + S + + Sbjct: 1372 EKFYD---DPRSNDGNSYRLQSWLYANRLLQYSDALEHLLSTGQGVVLERSIFSDFVFME 1428 Query: 106 ----QGERDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 QG + ++ + + + + P I +D+PV LKR+Q + E Sbjct: 1429 AMFKQGFIRKQCVEHYEEIKRLTAPEYLPPHLVIFIDMPVPEILKRIQEKGDPHEK 1484 >gi|9626826|ref|NP_041096.1| ORF5 [Ictalurid herpesvirus 1] gi|9626904|ref|NP_041174.1| ORF5 [Ictalurid herpesvirus 1] gi|125445|sp|P28855|KITH_ICHVA RecName: Full=Thymidine kinase gi|331215|gb|AAA88108.1| ORF5 [Ictalurid herpesvirus 1] gi|331292|gb|AAA88186.1| ORF5 [Ictalurid herpesvirus 1] Length = 228 Score = 61.2 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 49/235 (20%), Positives = 88/235 (37%), Gaps = 35/235 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL EG G GK+T + L + +V EP ++ L + Sbjct: 16 GLVFCVEGNIGCGKSTLVKALMERVAGSGVNVV--EEPVDQWVNHNGKNYL---ELSYTD 70 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS----YAYQGERDSSQHLFL-- 117 A+ F D NV R L + +R S+ A G R L Sbjct: 71 PTGYAVPFQNLVFDSYVNVQR--LQNPD--IMERSPMSATRVFCAVNGSRGVIPATALPG 126 Query: 118 ------DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIH 170 ++ I+ + V + L+LP + L+R++ R E+ LDY ++H Sbjct: 127 MAARGEAVMRTIATRPVF----VYLELPPEECLRRMRRRDRTGEAGVGLDYL----RLLH 178 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 E+ + +L A + VD++ S + + ++ I+ + +PL+ K + Sbjct: 179 ER-YEAWLSSAED----VERVDASRSREEIVDRVIEILCRRHPRLRAPLTRKSQL 228 >gi|320156427|ref|YP_004188806.1| putative deoxyribonucleoside kinase [Vibrio vulnificus MO6-24/O] gi|319931739|gb|ADV86603.1| putative deoxyribonucleoside kinase [Vibrio vulnificus MO6-24/O] Length = 197 Score = 61.2 bits (148), Expect = 9e-08, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 78/217 (35%), Gaps = 25/217 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG GAGK+T + L L ++V + S ++F A Sbjct: 1 MYIAIEGNIGAGKSTVLEPLAAKL---GFEVIHEGIETDKGFQDCLAAFYESNAKEDFDA 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A R + + L K + +R L A ++ +LQ+ Sbjct: 58 VQVYL--ANYRANLISK-----LDPNKNYIMERSLQ-GAALFCIAENHTDTATWTLQDF- 108 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA-- 181 P + LD P +I L+R+ R E LDY E + + D A Sbjct: 109 KHVPQPLHYLYLDCPAEICLQRIAKRGRECEQTIPLDYLE--------RVEKAHKDWAYM 160 Query: 182 RNQPDRCHIVDSAHSF--QSVATNILNIVWELVQKRV 216 +VDS+ ++A +I ++ + RV Sbjct: 161 GEWAGIVSVVDSSGQINLDALAEHINKVIEVKTKPRV 197 >gi|157691305|ref|YP_001485767.1| deoxyguanosine kinase [Bacillus pumilus SAFR-032] gi|157680063|gb|ABV61207.1| deoxyguanosine kinase [Bacillus pumilus SAFR-032] Length = 207 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKTT ++L + Q V P E ++++ + Sbjct: 6 FIAVEGPIGAGKTTLATMLAKEFQFPLVKEIVEENPFLDKFYE---------DMEQWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E + F R +E++ + + ++ D + + + + +D ++I Sbjct: 57 LE-MFFLCNRFKQLESIQENYVNHQQPIVTDYHVYKNMIF--AERTLSKKHMDKYRKIYH 113 Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 P+ I + + L+R+Q R E Sbjct: 114 LLTDDLPKPNAIIYIKASLPTLLERIQMRGRSFEED 149 >gi|167033597|ref|YP_001668828.1| hypothetical protein PputGB1_2593 [Pseudomonas putida GB-1] gi|166860085|gb|ABY98492.1| conserved hypothetical protein [Pseudomonas putida GB-1] Length = 213 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 21/161 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 MN LF+S +G +G GKTT + + + L+ + V E P + S Sbjct: 1 MNRPLFVSIDGPKGTGKTTLLEAVTQALRVEGKKVIRLCERNNDPYRRETMALVNQLARS 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D E FAA+R + + P I+L DR+ S A+ R + Sbjct: 61 PCQDLEFRVCER--FAASRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDH 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS 152 + L + +PD T + R R Sbjct: 115 ILRLN-LERSVQVPDLHVGVVT-----APETSWARAAARTR 149 >gi|26990078|ref|NP_745503.1| hypothetical protein PP_3363 [Pseudomonas putida KT2440] gi|24985006|gb|AAN68967.1|AE016528_5 thymidylate kinase, putative [Pseudomonas putida KT2440] Length = 205 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 55/161 (34%), Gaps = 21/161 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 MN LFISF+G +G GKTT + + + L+ V E P + S Sbjct: 1 MNRPLFISFDGPKGTGKTTLLEAVTQALRLDGNKVIRLCERKNDPHRGETMALVNQLSRS 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D E FA +R + + P I+L DR+ S A+ R + Sbjct: 61 PCQDLEFKVCER--FAESRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDK 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYS 152 + L + +PD T + R R Sbjct: 115 ILRLN-LERNVQVPDLHVGVVT-----TPETSWARAAARTR 149 >gi|117606370|ref|NP_997198.2| UMP-CMP kinase 2, mitochondrial precursor [Homo sapiens] gi|296439392|sp|Q5EBM0|CMPK2_HUMAN RecName: Full=UMP-CMP kinase 2, mitochondrial; Flags: Precursor gi|119621441|gb|EAX01036.1| hypothetical protein LOC129607, isoform CRA_a [Homo sapiens] Length = 449 Score = 61.2 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 74/230 (32%), Gaps = 54/230 (23%) Query: 1 MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 + G F ++ EG++ GKTT + L+ V + P + R + Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DD 297 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-L 117 A ++ + + + ++ DR+ S+ Y + S L L Sbjct: 298 EPTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHL 352 Query: 118 DSLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACL 159 Q D + + L+R+Q R + E+ + Sbjct: 353 PPAHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV 405 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S + V +L+++ Sbjct: 406 ---------FRQKVEMSYQRM--ENPG-CHVVDASPSREKVLQTVLSLIQ 443 >gi|239616711|ref|YP_002940033.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1] gi|239505542|gb|ACR79029.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1] Length = 204 Score = 60.8 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 22/164 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I F G G+GKTT L L +++H P E + + Sbjct: 2 GKMIVFAGNVGSGKTTIARALADAL---GFEIHFES-VSDNPFLE---DFYHNQRKWAYH 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAYQGERDSSQ-----HL 115 + ++ H ++ A+ +G ++ DR + +A Sbjct: 55 LQTFFLI-------HRFTALKEAMEKGSNIVFDRSIYEDAEIFARNLYETGKMEKREFET 107 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 +LD + PD + +D +D L R++ R E Sbjct: 108 YLDMFYSMIKYIPHPDLLVFIDADIDTILARIRKRGRNMELEVP 151 >gi|328778513|ref|XP_396785.4| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Apis mellifera] Length = 415 Score = 60.8 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 21/175 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 I +G GKT + + E R + Sbjct: 77 KLIVVDGPPAVGKTKLCEQIAKDFGFLYMPAPTHDEIFINYYGFDIRDLNPQLPESCRFY 136 Query: 54 -LLSCGVDEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 L + + + + F R + N + L G+ ++ +R + + YA+ Sbjct: 137 DLKDFLRNPYYYRTASIQLGFFNMRFEQYMNALVHILATGQGVVLNRSIFTEYAFMDAMH 196 Query: 111 SSQHLFLDSLQEISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 + +L +++E + + P I LD +I ++++ R ++ E Sbjct: 197 KAGYLSDLTVKEFEMMRKNSFKFLLRPHLVIYLDASPEIIQEKIKKRGNVDEINS 251 >gi|225077170|ref|ZP_03720369.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens NRL30031/H210] gi|224951518|gb|EEG32727.1| hypothetical protein NEIFLAOT_02225 [Neisseria flavescens NRL30031/H210] Length = 211 Score = 60.8 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 16/155 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN +I EG G+GKT L ++ P P + + G Sbjct: 1 MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117 A + F R + V N+I +G +++ D FL D + D Q LF Sbjct: 54 ----LAAELFFLTRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFA 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q I Q V PD I L V+ KR+Q R+ Sbjct: 108 DMKQRILPQYVEPDVVIYLQTAVENNRKRLQKRHE 142 >gi|12963517|ref|NP_075625.1| thymidylate kinase isoform 2 [Mus musculus] gi|1836040|gb|AAB46837.1| thymidylate kinase [Mus sp.] gi|12848397|dbj|BAB27937.1| unnamed protein product [Mus musculus] gi|12859415|dbj|BAB31646.1| unnamed protein product [Mus musculus] gi|12859652|dbj|BAB31722.1| unnamed protein product [Mus musculus] gi|47124402|gb|AAH69902.1| Deoxythymidylate kinase [Mus musculus] gi|74141414|dbj|BAE35986.1| unnamed protein product [Mus musculus] gi|148707984|gb|EDL39931.1| deoxythymidylate kinase, isoform CRA_b [Mus musculus] Length = 80 Score = 60.8 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I EG++ AGKTT L L + + R P + + L + Sbjct: 4 RRGALIVLEGVDRAGKTTQGLKLVTALCASGHRAELLRFPERSTEIGKLLNSYLEKKTE- 62 Query: 62 FGAEAEAIVFAAARLDHV 79 + ++F+A R + V Sbjct: 63 LEDHSVHLLFSANRWEQV 80 >gi|148547616|ref|YP_001267718.1| hypothetical protein Pput_2395 [Pseudomonas putida F1] gi|148511674|gb|ABQ78534.1| thymidylate kinase [Pseudomonas putida F1] Length = 205 Score = 60.8 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 71/224 (31%), Gaps = 32/224 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLS 56 MN LFIS +G +G GKTT + + + L+ V E P + S Sbjct: 1 MNRPLFISIDGPKGTGKTTLLEAVTQALRLDGNKVIRLCERKNDPHRGETMALVNQLSRS 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D E FA +R + + P I+L DR+ S A+ R + Sbjct: 61 PCQDLEFKVCER--FAESRAW-ISRHVLPRQPADSIILIDRWYPSDAAF---RRTVPFDK 114 Query: 117 LDSLQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERK---DVM 168 + L + +PD T + R R S + + + Sbjct: 115 ILRLN-LERNVQVPDLHVGVVT-----TPETSWARAAARTRGLGSTVIHNLDEQVACTEA 168 Query: 169 IHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIVWEL 211 + + RN+ VD + V I ++ L Sbjct: 169 FERAVAEQGWVLCRNEG----TVDEATR---QVVREIQGVLRHL 205 >gi|253999872|ref|YP_003051935.1| deoxynucleoside kinase [Methylovorus sp. SIP3-4] gi|313201846|ref|YP_004040504.1| deoxynucleoside kinase [Methylovorus sp. MP688] gi|253986551|gb|ACT51408.1| deoxynucleoside kinase [Methylovorus sp. SIP3-4] gi|312441162|gb|ADQ85268.1| deoxynucleoside kinase [Methylovorus sp. MP688] Length = 215 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 64/191 (33%), Gaps = 27/191 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G+GKTT L V++ E + L + Sbjct: 9 YIVIEGPIGSGKTTLARKLADKFS-----VNLLLENAESNPFLP--RFYLDAPRYALPTQ 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123 + F R + + ++ + L GK + D FL D +A D L+ Q + Sbjct: 62 ---LFFLFQRCEQIRDLSQRDLF-GKATIADFFLEKDPLFARMNLDDEEFALYRQIYQHL 117 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 VQ PD I L PVD +RV R E R+ +A Sbjct: 118 QVQVSTPDLVIYLQTPVDALAERVNQRNISYEQEIP--------------REYLKRLADA 163 Query: 184 QPDRCHIVDSA 194 + H D+A Sbjct: 164 YSEFFHQYDAA 174 >gi|157371350|ref|YP_001479339.1| hypothetical protein Spro_3111 [Serratia proteamaculans 568] gi|157323114|gb|ABV42211.1| conserved hypothetical protein [Serratia proteamaculans 568] Length = 205 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 54/169 (31%), Gaps = 15/169 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59 M+ LF++ +G +GAGKTT + + + L+ N V + + E V Sbjct: 1 MSRQLFVALDGPKGAGKTTLLEAITKGLRADNKKVIRLCEKKSDPYRGETMALVNKLARN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E E A + + I+L DR+ S A+ R + Sbjct: 61 PTLDLELEVCKRFADSRAWISRHVLTKQPPDSIILMDRWYPSDAAF---RRMVPFAEILQ 117 Query: 120 LQEISVQEVMPDC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 L I PD T DI R R S + E Sbjct: 118 LN-IERNVRTPDLHVGVVT-----APDISWARAAARPRGLSSTVIHKLE 160 >gi|104781815|ref|YP_608313.1| hypothetical protein PSEEN2729 [Pseudomonas entomophila L48] gi|95110802|emb|CAK15515.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 202 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 11/136 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGV 59 MN LFIS +G +G GKTT + + R L+ N V + + E L++ V Sbjct: 1 MNRSLFISLDGPKGTGKTTLLESVTRALRADNRKVIRLCEKKSDPYRGETM--ALVNQFV 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLF 116 + E + + + L + G I+L DR+ S A+ R Sbjct: 59 RNPCRDLELSI-CKRFAQSRHWMSQHVLAKQPPGSIILIDRWYPSDAAF---RRLVSFAE 114 Query: 117 LDSLQEISVQEVMPDC 132 + L I +PD Sbjct: 115 ILRLN-IERNVRVPDL 129 >gi|308501733|ref|XP_003113051.1| CRE-NUO-4 protein [Caenorhabditis remanei] gi|308265352|gb|EFP09305.1| CRE-NUO-4 protein [Caenorhabditis remanei] Length = 436 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 34/230 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGG---TPAAEAARHVLL 55 I EG G+GKTT L L + + D+ + R + AR+ L Sbjct: 73 KLIVIEGNIGSGKTTLAKQLADQLGFVHIPEFRMDDILIDRYGNDLRNYYSKFPARYRLP 132 Query: 56 SCGVDEFGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + E R+ D N + L G+ ++ +R S + + Sbjct: 133 DMSMFYKNPRGELSAAMQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMR 192 Query: 111 SSQHL---------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 ++ F+ + P + L+ P + L+ ++ R + E A +D Sbjct: 193 DKNYIGHEYFKHYYFVRK-NALPQLHFWPHLVVYLNTPTNKCLENIKRRGNTDEIAVVD- 250 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAHS--FQSVATNILNI 207 ER + + + D R + I+ D +V +I + Sbjct: 251 -ER----YLKTIEESYKDSLREYRNHSKILAYDWTKPGDTDAVVEDIERL 295 >gi|90023018|ref|YP_528845.1| DNA polymerase III, epsilon subunit [Saccharophagus degradans 2-40] gi|89952618|gb|ABD82633.1| deoxynucleoside kinase [Saccharophagus degradans 2-40] Length = 230 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 28/178 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62 FI+ EG G GKTT L + NYD + R E P A + Sbjct: 18 RFIAVEGPIGVGKTTLAKQLAQTF---NYDTLLERAEENPFLPRFYA---------NEHN 65 Query: 63 GAEAEAIVFAAARLDHV-----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A + F R+ + +++ +P + ++ DR +A + + L+ Sbjct: 66 SALPTQLFFLFQRVQQINDLKQDDIFQPVRVADFLIDKDR----LFAEVTLDEEAMRLYD 121 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF----ERKDVMIH 170 +++ PD + L P D+ ++R++ R E A +Y E H Sbjct: 122 QVYNHMTINAPKPDLVVYLQAPEDVLVERIKKRGIQNEQAISPEYLHQLNEAYTRFFH 179 >gi|331703438|ref|YP_004400125.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328801993|emb|CBW54147.1| Deoxynucleoside kinase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 212 Score = 60.4 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 36/224 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEFGA 64 I+ G GAGKTT + LK+ L ++ T P A + + Sbjct: 3 IAIFGTTGAGKTTLLENLKKLLDSSYIFINETSLDCPYFNKAYDDTNKNVQDYNYKLD-- 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL 120 + R ++ I+ + + ++ DR + S + S + + Sbjct: 61 ----LWMLTDR---MKTFIK--YKDHQNVIYDRSILDSMVFSQTDHMYNRLSDTDY-NVF 110 Query: 121 QEISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++ + ++P D I L + ++R+ R E D F Sbjct: 111 KDYFLTCILPNIFDIKNNWKTFDVVIYLKVDPYKAIQRINKRSRDVELDTNDLFWLNLTN 170 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211 +E I+ ++ P ++D+ +AT+I N++ + Sbjct: 171 AYEFWYNIYKEVI---P--FWVIDANVDDPNYIATSIANMIKNI 209 >gi|297625036|ref|YP_003706470.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093] gi|297166216|gb|ADI15927.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093] Length = 209 Score = 60.0 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 13/174 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKT+ LL L + V P P F A+ Sbjct: 3 FIAVEGPIGAGKTSLSRLLAESLGAQLVLEVVEENPFLAPF-------YRDPERYAFSAQ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQ-EI 123 ++ +R V+ + + +L + D D + + + L ++ Sbjct: 56 TFFLL---SRFKQVQEMRQGSLFF-THTVADYLFDKDVIFASLNLRGDEWRLYEELYTQL 111 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + PD T+ L D+ L+R+ R E + + +++ + + Sbjct: 112 RPKLPEPDLTVYLRATPDLLLERIAKRARPFEQDLEAAYLQALGEAYDRYFERY 165 >gi|297172526|gb|ADI23497.1| deoxynucleoside kinases [uncultured gamma proteobacterium HF0770_40P16] Length = 229 Score = 60.0 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 65/202 (32%), Gaps = 27/202 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EG G GKTT +LL Y+ + + + + A Sbjct: 16 KFIAVEGPIGVGKTTLANLLADSF---GYETFLEKPSANPFLGDFYKK-------PSQNA 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 A + F R+ ++ + + + + D FL D +A D L+ Sbjct: 66 LATQLFFLFQRVKQIQELKQDDIFSPVKV-SD-FLVEKDKLFAKATLSDQELTLYEQIYN 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEK----- 172 +S + PD I L +R+ R E LD + + Sbjct: 124 YLSFDLITPDIVIYLQAKSKTLFERIMRRGIDIEKNITLKYLDILNESYLEFFQNYEKSP 183 Query: 173 ---RRQIFLDIARNQPDRCHIV 191 F+D+ N+ D ++ Sbjct: 184 VLIVNSDFIDLVNNKKDYILLL 205 >gi|129560535|dbj|BAF48830.1| hypothetical protein [Cyprinid herpesvirus 3] Length = 293 Score = 60.0 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 37/238 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ EG GAGK+T I +K + +R+ ++V V EP + + LL + Sbjct: 60 VAVEGNLGAGKSTFIEAMKEYAKRQRWEVMV--EPIDSWTDVCGKGNLLDRYYKDMPRWG 117 Query: 67 EAIVFAA--ARLDHVENVIR--PALMEGKIL-----LCDRFLDSSYAYQ-GERDSSQHLF 116 A +RL + P L ++ DRF+ A G D + Sbjct: 118 YTFQSYAYQSRLQRQTELEMGLPMLGVDVVVYERSCFSDRFVFGEAARMSGNMDELEFAA 177 Query: 117 LDSLQEISVQEV-MP-DC--TIILDLPVDIGLKRVQNRYSLRESA-CLDYFE-----RKD 166 + + + + P D I L L+RV R ES+ ++Y +D Sbjct: 178 YSAAHKFFAEILQRPFDIHGVIYLRATPKTCLERVNKRSRSEESSVDMEYLTTIHKLHED 237 Query: 167 VMIHEKRRQIFLDIARNQPDRCHI------VDSAHSFQSVA--TNILNIVWELVQKRV 216 ++H+K P C + VD ++ + VA I V ++ +V Sbjct: 238 WLMHKK------GPCEQYPSMCKVPVLVVNVD-EYNCEDVARRREIFAEVDAFIKDQV 288 >gi|254283056|ref|ZP_04958024.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR51-B] gi|219679259|gb|EED35608.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR51-B] Length = 227 Score = 60.0 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 42/193 (21%), Positives = 73/193 (37%), Gaps = 23/193 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKTT + L NYDV + +P P E A Sbjct: 20 FIAVEGPIGVGKTTLANRLAGTF---NYDVLL-EDPQENPFLERFYQ------NPRQTAL 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ- 121 A + F R ++++ + + E + L D D +A DS ++ + + Sbjct: 70 ATQLFFLFQRAQKIQDMRQQDIFEPVRVADFLID--KDPLFAR-VNLDSDEYQLYNKVYG 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++++ PD I L VD +R+Q R E + +R+ + + F Sbjct: 127 QLTIDAPTPDLVIYLQASVDRLQERIQQRGLPAER----HIDREYLETLNEVYSEFFLYY 182 Query: 182 RNQPDRCHIVDSA 194 P I+++ Sbjct: 183 DAAP--LLIINAN 193 >gi|319637819|ref|ZP_07992585.1| deoxyguanosine kinase [Neisseria mucosa C102] gi|317400974|gb|EFV81629.1| deoxyguanosine kinase [Neisseria mucosa C102] Length = 211 Score = 60.0 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 58/155 (37%), Gaps = 16/155 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN +I EG G+GKT L ++ P P + + G Sbjct: 1 MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117 A + F R + V N+I +G +++ D FL D + D + LF Sbjct: 54 ----LAAELFFLTRRAESV-NIIEDHCAQGGMVVAD-FLPEKDRIFTPIVLNDDERQLFA 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q I Q PD I L V+ KR+Q R+ Sbjct: 108 DIKQRILPQYAEPDVVIYLQTAVENNRKRLQKRHE 142 >gi|332027605|gb|EGI67676.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Acromyrmex echinatior] Length = 342 Score = 60.0 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 23/174 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I EG AGK+ + L + E R + Sbjct: 49 IVVEGPIAAGKSKVAAKLAEEFEMVYLPPPTFDEYYINEYGYDIRTLDDRLSVGSQSCDV 108 Query: 54 --LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----- 106 L+ + + + D + L G+ ++ +R + Y + Sbjct: 109 QKFLTNPYHPNVPMFQFH-YFQFKFDQYITALLHLLSTGQGVVLNRSFYTDYVFAKAMTN 167 Query: 107 -GERDSSQHLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 G S F + + I+ +Q + P I LDLPVD +++++ R E Sbjct: 168 AGYMRSEVLKFYNDIVNIAKLQMLRPHLIIYLDLPVDTVMEKIKKRGIPYEVNS 221 >gi|131840049|ref|YP_001096058.1| ORF19 [Cyprinid herpesvirus 3] gi|106006034|gb|ABF81799.1| hypothetical protein [Cyprinid herpesvirus 3] gi|109706624|gb|ABG42850.1| ORF19 [Cyprinid herpesvirus 3] Length = 241 Score = 60.0 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 87/238 (36%), Gaps = 37/238 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ EG GAGK+T I +K + +R+ ++V V EP + + LL + Sbjct: 8 VAVEGNLGAGKSTFIEAMKEYAKRQRWEVMV--EPIDSWTDVCGKGNLLDRYYKDMPRWG 65 Query: 67 EAIVFAA--ARLDHVENVIR--PALMEGKIL-----LCDRFLDSSYAYQ-GERDSSQHLF 116 A +RL + P L ++ DRF+ A G D + Sbjct: 66 YTFQSYAYQSRLQRQTELEMGLPMLGVDVVVYERSCFSDRFVFGEAARMSGNMDELEFAA 125 Query: 117 LDSLQEISVQEV-MP-DC--TIILDLPVDIGLKRVQNRYSLRESA-CLDYFE-----RKD 166 + + + + P D I L L+RV R ES+ ++Y +D Sbjct: 126 YSAAHKFFAEILQRPFDIHGVIYLRATPKTCLERVNKRSRSEESSVDMEYLTTIHKLHED 185 Query: 167 VMIHEKRRQIFLDIARNQPDRCHI------VDSAHSFQSVA--TNILNIVWELVQKRV 216 ++H+K P C + VD ++ + VA I V ++ +V Sbjct: 186 WLMHKK------GPCEQYPSMCKVPVLVVNVD-EYNCEDVARRREIFAEVDAFIKDQV 236 >gi|327198711|emb|CCA61412.1| unnamed protein product [Diadromus pulchellus ascovirus 4a] Length = 187 Score = 60.0 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 75/209 (35%), Gaps = 29/209 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I EG G GK++ + + V EP + + Sbjct: 1 MYICIEGNIGCGKSSVLKAFAE------NNFVVFPEPLEKWT--LLEELYRDPEKYAYPF 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHLFLDSLQ 121 + + ++ N L + + +R +S ++ SQ LDS Sbjct: 53 QLQVVL-----SQIETNKAIRRLSRSCVKIMERSAWASKNVFSNVRNWSQSQIDVLDSCY 107 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI 180 ++ +V+P+ I LDL + +R+ R E LDY R D E ++ Sbjct: 108 DLI--DVVPEYYIYLDLDPRVCHQRIAQRNRFEERNISLDYLIRLDERYKE-------EL 158 Query: 181 ARNQPDRCHIVD-SAHSFQSVATNILNIV 208 ++ ++D + + + + NI +I+ Sbjct: 159 SKL--KNTIVIDCGSMTTEQIVKNIRDIL 185 >gi|253997251|ref|YP_003049315.1| deoxynucleoside kinase [Methylotenera mobilis JLW8] gi|253983930|gb|ACT48788.1| deoxynucleoside kinase [Methylotenera mobilis JLW8] Length = 215 Score = 59.7 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 14/167 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G GKTT +L P + +G Sbjct: 9 YIVVEGPIGCGKTTLSKMLAEKFPVDYLSEKAEANPFLPRFYQ---------DAQRYGLP 59 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI 123 + + F R + ++ + + + I+ D FL D +A D L+ Q + Sbjct: 60 TQ-LFFLFQRANQIKELSQRDMFAKPIV-ADFFLEKDPIFARLNLDDEEYALYHQIYQHL 117 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMI 169 ++ PD I L P+D ++R++ R E +Y ER Sbjct: 118 QLKAPKPDLVIYLQTPIDSLMERIEERSVSYEQDIPREYIERLSNAY 164 >gi|15605675|ref|NP_213050.1| adenylate kinase [Aquifex aeolicus VF5] gi|6225575|sp|O66490|KAD_AQUAE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|163310973|pdb|2RGX|A Chain A, Crystal Structure Of Adenylate Kinase From Aquifex Aeolicus In Complex With Ap5a gi|163310974|pdb|2RH5|A Chain A, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus gi|163310975|pdb|2RH5|C Chain C, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus gi|163310976|pdb|2RH5|B Chain B, Structure Of Apo Adenylate Kinase From Aquifex Aeolicus gi|2982815|gb|AAC06438.1| adenylate kinase [Aquifex aeolicus VF5] Length = 206 Score = 59.7 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 81/231 (35%), Gaps = 52/231 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGV 59 + + F G GAGK T L + K + T + R + L Sbjct: 1 MILVFLGPPGAGKGTQAKRLA---KEKGFVHIST--------GDILREAVQKGTPLGKKA 49 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E+ E + D + +I + ++ D F R Q LD Sbjct: 50 KEYMERGELVP-----DDLIIALIEEVFPKHGNVIFDGF---------PRTVKQAEALD- 94 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA------------CLDYFERKDV 167 + + + + D ++ ++P ++ ++R+ R E+ + +R+D Sbjct: 95 -EMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVKVIQREDD 153 Query: 168 --MIHEKRRQIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVWE 210 + +KR +++ + + + I+D++ + V +L ++ + Sbjct: 154 KPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVIGD 204 >gi|331006240|ref|ZP_08329560.1| Deoxyadenosine kinase [gamma proteobacterium IMCC1989] gi|330419929|gb|EGG94275.1| Deoxyadenosine kinase [gamma proteobacterium IMCC1989] Length = 228 Score = 59.7 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 20/200 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKTT L NYD + + P E LS + Sbjct: 20 FIAVEGAIGAGKTTLAKRLAETF---NYDTLL-EKAEENPFLERFYQDRLSNALPTQ--- 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123 + F R ++ + + + + + + D +D + L + ++ Sbjct: 73 ---LFFLFQRAQQIQELRQSDIFQP-VRVSDFLIDKDPLFAEVTLDKDELAIYQQVYNQL 128 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ PD + L PV+ L R++ R E + + + F Sbjct: 129 TIDAPKPDLVVYLQAPVNTLLHRIKTRGVNAEQT----IDNSYLETINEAYTRFFHFYDQ 184 Query: 184 QPDRCHIVDSAHSFQSVATN 203 P IV++ V + Sbjct: 185 SP--LLIVNAN-EIDWVNND 201 >gi|256384254|gb|ACU78824.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385087|gb|ACU79656.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455411|gb|ADH21646.1| deoxynucleoside kinase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 212 Score = 59.7 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 36/224 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEFGA 64 I+ G GAGKTT + LK+ L ++ T P A + + Sbjct: 3 IAIFGTTGAGKTTLLENLKKLLDSSYVFINETSLDCPYFNKAYDDTNKNVQDYNYKLD-- 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL 120 + R ++ I+ + + ++ DR + S + S + + Sbjct: 61 ----LWMLTDR---MKTFIK--YKDHQNVIYDRSILDSMVFSQTDHMYNRLSDTDY-NVF 110 Query: 121 QEISVQEVMP------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++ + ++P D I L + ++R+ R E D F Sbjct: 111 KDYFLTCILPNIFDIKNNWKTFDVVIYLKVDPYKAIQRINKRSRDVELDTNDLFWLNLTN 170 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211 +E I+ ++ P ++D+ +AT+I N++ + Sbjct: 171 AYEFWYNIYKEVV---P--FWVIDANVDDPNYIATSIANMIKNI 209 >gi|261379860|ref|ZP_05984433.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703] gi|284797557|gb|EFC52904.1| deoxynucleoside kinase family protein [Neisseria subflava NJ9703] Length = 211 Score = 59.7 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 16/155 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN +I EG G+GKT L ++ P P + + G Sbjct: 1 MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117 A + F R + V N+I +G +++ D FL D + D Q LF Sbjct: 54 ----LAAELFFLMRRAESV-NIIEDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFA 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q I Q PD I L V+ KR+Q R+ Sbjct: 108 DMKQRILPQYAEPDVVIYLQTAVENNRKRLQKRHE 142 >gi|15078856|ref|NP_149606.1| 143R [Invertebrate iridescent virus 6] gi|82013396|sp|O55749|VF143_IIV6 RecName: Full=Putative kinase protein 143R gi|2738433|gb|AAB94460.1| 143R [Invertebrate iridescent virus 6] Length = 195 Score = 59.7 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 42/219 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I +GI GAGK+T LK+ L EP LL ++ A Sbjct: 4 ICIDGIIGAGKSTVTHRLKKNL------YKCYEEPIDKWT-------LLPNLYNDMKKYA 50 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS----YAYQGERDSSQHLFLDSLQE 122 F + + ++ +R +S + E + +D+ Sbjct: 51 TPFQFQVLFSQ--YDQYLSFKDCKETVVVERCPWTSKNIFTSLMIENNLFDLSAIDTYNN 108 Query: 123 IS------VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--HEKRR 174 + V I + + ++ +R++ R D F +++ + Sbjct: 109 LYERLSYQVDHF-----IYIKVDSEMAFERIKKR---------DRFAEQNISFDYLKSLE 154 Query: 175 QIFLD-IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +A P I+D +++ + V ++ + + Sbjct: 155 NKYATSLATLSPSTVTIIDGSNTIEEVEFDVKTAINNFL 193 >gi|195502459|ref|XP_002098233.1| GE10263 [Drosophila yakuba] gi|194184334|gb|EDW97945.1| GE10263 [Drosophila yakuba] Length = 407 Score = 59.3 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 28/226 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54 I EG AGK+ L L + Y R + Sbjct: 85 ICVEGPFAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144 Query: 55 ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 L D A+ + ++ R + ++ L G+ ++ +R S + + Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAMF 202 Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 QG + L++ ++ E+ P I LDLPVD K+++ R E + + Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + + +Q +L + I D + + V +I I Sbjct: 263 AYLSDVEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307 >gi|325524979|gb|EGD02902.1| deoxyguanosine kinase [Burkholderia sp. TJI49] Length = 228 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 18/163 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTTLARLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + FA R +I AL G+ ++ D + + L + I+ Sbjct: 71 Q---LSFALQRAQQAGELI-GALDTGRPVVADFMPQKNDIFARLNLPEDEWQLY--RSIA 124 Query: 125 VQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 +PD + L ++ R+Q R E D + Sbjct: 125 THLDVPRAPVPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|110643225|ref|YP_670955.1| ATP-binding protein YghT [Escherichia coli 536] gi|110344817|gb|ABG71054.1| hypothetical ATP-binding protein YghT [Escherichia coli 536] Length = 230 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 52/241 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAAR 51 I+ G +G+GK+T L +++ VH+ ++ G G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 52 HVLLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG 107 + G ++ F A RL H +++ G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLHFRHML-ACRRRGLIVLTDRYPQDQIPGAYDG 126 Query: 108 ER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLR 154 + F+ L ++ PD I L++ +++ R R SL Sbjct: 127 TVFPPNIEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLA 184 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + +D+ + V + + + + Sbjct: 185 RKIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLIDAEKAITDFMTA 226 Query: 215 R 215 R Sbjct: 227 R 227 >gi|155370536|ref|YP_001426070.1| hypothetical protein FR483_N438R [Paramecium bursaria Chlorella virus FR483] gi|155123856|gb|ABT15723.1| hypothetical protein FR483_N438R [Paramecium bursaria Chlorella virus FR483] Length = 187 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 40/213 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ EG+ G+GK++ + LQ++ V EP + + + Sbjct: 4 IAIEGLMGSGKSSVLR----ELQKRGIRVIA--EPTQDW--KYLDKFYGNRKKYALTLQI 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV- 125 E ++ ++++ +R S + + SS+ + D ++++ Sbjct: 56 EILLSF-----------LKYKFSDELVVVERSPQVSRSVFAKMLSSEGILSD--EDMATY 102 Query: 126 ----QEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 P D I+LD P +I ++R +R + + + +K +IF Sbjct: 103 VDIYDLAKPWKVDMYIVLDCPTEICIERAGSRGDSYKITP------EYMKDLKKYYEIFF 156 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 C V+S V N++ IV + Sbjct: 157 KYTD-----CKRVNSDRPLNDVVDNVMEIVSQA 184 >gi|294944735|ref|XP_002784404.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983] gi|239897438|gb|EER16200.1| thymidylate kinase, putative [Perkinsus marinus ATCC 50983] Length = 96 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 86 ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145 L G+ ++CDR++ S AY + + + + + V PD + LD+ + K Sbjct: 7 HLAAGRHIVCDRYIFSVVAYTAMKVTVDF---EWCKSVDVGLPRPDMVMFLDISPEAAAK 63 >gi|196228061|ref|ZP_03126928.1| hypothetical protein CfE428DRAFT_0092 [Chthoniobacter flavus Ellin428] gi|196227464|gb|EDY21967.1| hypothetical protein CfE428DRAFT_0092 [Chthoniobacter flavus Ellin428] Length = 443 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 15/179 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQR--KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G +I F G +G GKTT +LL + + H P P + + Sbjct: 232 GRWIVFVGPDGVGKTTVATLLLAETKDFFRGARYHHWIPPWQKPLTSTVPASAPKPPLRD 291 Query: 62 FGAEAEAIVFAAAR------LDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 A A + +A R H+ I P L+ ++++ DR+L + Y + +S + Sbjct: 292 RPAGTGATISSALRLVRNVFRAHLAYCFRILPQLLRQRLVIGDRYLFN---YHLDPESVR 348 Query: 114 HLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIH 170 + S +++ PD + L + +R + E + H Sbjct: 349 YYGPSSWVRFALRFVPKPDLVLCLVADPEEIHRRKPELSLDEIRRVISRGEELSSIGFH 407 >gi|271962255|ref|YP_003336451.1| hypothetical protein Sros_0685 [Streptosporangium roseum DSM 43021] gi|270505430|gb|ACZ83708.1| hypothetical protein Sros_0685 [Streptosporangium roseum DSM 43021] Length = 211 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 75/221 (33%), Gaps = 34/221 (15%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSC----GV 59 + G + AGK+T + L+ + V + A R + +L G Sbjct: 6 TLLGPDFAGKSTLLRQLRD---ERACQVVSYDDWCVAERFPAIRRLRREWVLDVYPRVGE 62 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A A A++ R H+ + + A + ++ D + + + + Sbjct: 63 EYSPAAAVAMLRPIVR--HLHDQVAGA-ADDIPVIVDSYYYKLLV---KCRLLGLVHERT 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--------VMIHE 171 E PD I LDLP ++ +R Q + L+ FE + Sbjct: 117 FAEW-RALPQPDGVIYLDLPPEVAWERAQ------WGSRLNAFEHYGPVPGWEGFAELQS 169 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + R ++ P ++D+ ++VA ++ V Sbjct: 170 RMRPAIMEEIAGLP--LVVLDARAGQRTVAAEAGRVLASAV 208 >gi|195453208|ref|XP_002073687.1| GK14239 [Drosophila willistoni] gi|194169772|gb|EDW84673.1| GK14239 [Drosophila willistoni] Length = 412 Score = 59.3 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 76/226 (33%), Gaps = 28/226 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------L 54 I EG AGKT L L + + P R + + Sbjct: 90 ICVEGPVAAGKTKFAKELAEELDMQYFPAVDMDLIYINPYGYDMRQLDAQMPPSCRSFDV 149 Query: 55 LSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106 + D A R + ++ G+ ++ +R S + + Q Sbjct: 150 KNFCQDPNHDLAALFQIRMYMLRYSQYIDALQHIFSTGQGVVLERSPHSDFVFMETMFRQ 209 Query: 107 GERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER- 164 G + +++ ++ E+ P I LDLPVD K++++R E + + E Sbjct: 210 GYISRGARSVYNEIRQNTLGELLKPHLVIYLDLPVDAVQKQIKSRNVDYEVSSKVFSEAY 269 Query: 165 -KDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 +D+ K Q +L + + I D + + V +I I Sbjct: 270 LRDLETLYK--QQYLKDISSHAE-LLIYDWTAGGETEVVVEDIERI 312 >gi|311893510|dbj|BAJ25918.1| hypothetical protein KSE_00660t [Kitasatospora setae KM-6054] gi|311900952|dbj|BAJ33360.1| hypothetical protein KSE_76080t [Kitasatospora setae KM-6054] Length = 211 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 63/217 (29%), Gaps = 32/217 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLS--CGVDEF 62 F G + AGK++ +SLL+ + + V T P T R ++ + Sbjct: 8 FCVLLGPDYAGKSSALSLLRDTVPWRTLSVDDTHLAPEHTLLTSLRRDLVREVAGRPGAW 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + F A L +R L + D + A + H Sbjct: 68 SPD-----FLATMLQTAAVHLRDRLCADPHTPAVVDSYYYKLLAKGRLAGADDHAGFAWW 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE----RKDVMIHEKRRQI 176 + P + LD+ +R + L+ E + + Q Sbjct: 123 RTF----PQPRRVVYLDVRPATAWRR------SHDGRDLNRLEYYGPQPTADGFTR-YQG 171 Query: 177 FLDIARNQPDRCH-----IVDSAHSFQSVATNILNIV 208 D+A+ D ++D A I ++ Sbjct: 172 --DLAKTMHDEIAHLPVTVIDGHGDPAQTAQAIRKVL 206 >gi|152980754|ref|YP_001354567.1| deoxyguanosine kinase [Janthinobacterium sp. Marseille] gi|151280831|gb|ABR89241.1| deoxyguanosine kinase [Janthinobacterium sp. Marseille] Length = 213 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 20/175 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG GAGKTT L L + + P P E Sbjct: 7 KYIVVEGAIGAGKTTLARKLAAQLGAQ----TLLELPEENPFLEKFYR---DAARYALPT 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + F R++ + ++ +P L + +I+ L D D +A D L+ Sbjct: 60 Q---MFFLLQRMNQLRDLAQPDLFDARIVSDFLLD--KDPIFARLTLSDDELALYQQLYD 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----ERKDVMIHE 171 + Q +PD I L + R++ R E+ + + E + +E Sbjct: 115 HLRPQAPLPDLVIYLQAEPQTLIDRIKKRGIPMEAGISENYMHRLCESYSRIFYE 169 >gi|147920512|ref|YP_685694.1| putative signal recognition particle [uncultured methanogenic archaeon RC-I] gi|110621090|emb|CAJ36368.1| putative signal recognition particle [uncultured methanogenic archaeon RC-I] Length = 377 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G+ GAGKTT I+ L L+ + Y V + G T A A L D G + Sbjct: 184 ITFIGVNGAGKTTTIAKLGERLKEQGYGVVIAA--GDTFRAGAIEQ--LEKHADRLGIKM 239 Query: 67 EAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + ++ A K I+L D R + ++ L++I+ Sbjct: 240 IKHAQGADPAAVIYDAVQFAKNNKKDIVLAD---------TAGRLHTNINLMEQLRKIN- 289 Query: 126 QEVMPDCTIILD 137 + V PD I +D Sbjct: 290 RVVKPDLVIFVD 301 >gi|88705694|ref|ZP_01103404.1| deoxypurine kinase [Congregibacter litoralis KT71] gi|88700207|gb|EAQ97316.1| deoxypurine kinase [Congregibacter litoralis KT71] Length = 221 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GKTT L + + + P E A Sbjct: 14 YIAVEGPIGVGKTTLTRRLAETFNHE----ILLEDAEQNPFLERFYR------NRSEAAL 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 A + F R ++ + + L + + D FL D +A L+ Q+ Sbjct: 64 ATQLFFLFQRAQKMQELRQSELFSP-VRVAD-FLIEKDPLFARINLDSDEFELYEKVYQK 121 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 +++ PD I L P D+ L+R++NR E + + Sbjct: 122 LTIDAPRPDLVIYLQAPTDVLLERIENRGIGHEKSIDSRY 161 >gi|322510905|gb|ADX06218.1| putative deoxynucleoside kinase COG1428 [Organic Lake phycodnavirus 2] Length = 206 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 74/221 (33%), Gaps = 31/221 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF 62 IS EG G+GK+T + LK+ + + EP + +L + Sbjct: 2 KIISIEGNIGSGKSTFVEALKKHFHSE--SICFLDEPVELWNTIVDEHGKTMLENYYQDS 59 Query: 63 GAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118 A + A +RL ++ I + I++ +R + D Q D +D Sbjct: 60 KKYAFSFQMMAYISRLSILKKAIDS--KKYDIIITERSLYTDKHVFCQMLYDDHTIQEMD 117 Query: 119 ------SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 E ++ +P + L + RV R E L Y ER + Sbjct: 118 YKIYNKWFDEFNMN--VPIHYVYLKTDPQVSYDRVIQRNRPGEIIPLSYLERCSL----- 170 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVA-TNILNIVWELV 212 + DI D +D+ + + I+ +++ Sbjct: 171 ----YHDIWLCNKD-IITIDAN--VDTSHTKEWVQIIEQMI 204 >gi|195330905|ref|XP_002032143.1| GM26394 [Drosophila sechellia] gi|194121086|gb|EDW43129.1| GM26394 [Drosophila sechellia] Length = 407 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 75/228 (32%), Gaps = 28/228 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---------- 54 I EG AGK+ L L + Y R + Sbjct: 83 KVICVEGPIAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSY 142 Query: 55 ------LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105 L D A+ + ++ R + ++ L G+ ++ +R S + + Sbjct: 143 DVRNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEA 200 Query: 106 ---QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 QG + L++ ++ E+ P I LDLPVD K+++ R E + Sbjct: 201 MFRQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVF 260 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + + + +Q +L + I D + + V +I I Sbjct: 261 SDAYLSDLEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307 >gi|221200984|ref|ZP_03574024.1| deoxynucleoside kinase family protein [Burkholderia multivorans CGD2M] gi|221206564|ref|ZP_03579577.1| deoxynucleoside kinase family protein [Burkholderia multivorans CGD2] gi|221214421|ref|ZP_03587392.1| deoxynucleoside kinase family protein [Burkholderia multivorans CGD1] gi|221165678|gb|EED98153.1| deoxynucleoside kinase family protein [Burkholderia multivorans CGD1] gi|221173873|gb|EEE06307.1| deoxynucleoside kinase family protein [Burkholderia multivorans CGD2] gi|221178834|gb|EEE11241.1| deoxynucleoside kinase family protein [Burkholderia multivorans CGD2M] Length = 228 Score = 58.9 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTTLAQLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + + FA R +I AL G+ ++ D + Q ++ + ++ Sbjct: 71 Q---LSFALQRAQQAAELI-GALDTGRPVVAD------FMPQKNDIFARLNLPEDEWQLY 120 Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + + PD + L ++ R+Q R E D + Sbjct: 121 RSIAAHLEAPRAPAPDLVVYLQASPEVLFARIQKRGLPMELQIGDAY 167 >gi|124268201|ref|YP_001022205.1| deoxynucleoside kinase [Methylibium petroleiphilum PM1] gi|124260976|gb|ABM95970.1| deoxynucleoside kinase [Methylibium petroleiphilum PM1] Length = 246 Score = 58.9 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 22/161 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPG--GTPAAEAARHVLLSCG 58 + EG G GKTT L L++ + ++ R GTP Sbjct: 12 VVVEGPIGVGKTTLARTLAAHWGARLVLEQPAENPYLARFYEHMGTPQGR--------GR 63 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHL 115 + + + F R++ ++ + + + + ++ D FL D+ +A D L Sbjct: 64 GNPLALQTQLS-FLFQRVEQMKELGQGGMFDHG-VVSD-FLFAKDAIFAMLTLGDEDLAL 120 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 + + S Q PD I L D+ + R++ R E Sbjct: 121 YRQIYKRHSAQAPQPDLVIWLQAEPDVLMARIRRRGIEMER 161 >gi|195572762|ref|XP_002104364.1| GD20916 [Drosophila simulans] gi|194200291|gb|EDX13867.1| GD20916 [Drosophila simulans] Length = 407 Score = 58.5 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 28/226 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54 I EG AGK+ L L + Y R + Sbjct: 85 ICVEGPIAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144 Query: 55 ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 L D A+ + ++ R + ++ L G+ ++ +R S + + Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAMF 202 Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 QG + L++ ++ E+ P I LDLPVD K+++ R E + + Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + + +Q +L + I D + + V +I I Sbjct: 263 AYLSDLEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307 >gi|260878751|ref|ZP_05891106.1| deoxynucleoside kinase family protein [Vibrio parahaemolyticus AN-5034] gi|308091062|gb|EFO40757.1| deoxynucleoside kinase family protein [Vibrio parahaemolyticus AN-5034] Length = 197 Score = 58.5 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 83/221 (37%), Gaps = 33/221 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ EG GAGK+T + L L Y+V + S ++F A Sbjct: 1 MYIAIEGNIGAGKSTVLEPLAALL---GYEVIHEGIETDKGFQDCLAAFYESGSKEDFNA 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 V+ A I L K + +R L + + + + + Sbjct: 58 ---LQVYLAN----YRANIIKNLDPTKNYIMERSLQGAVLFCLAENHTDTAT------WT 104 Query: 125 VQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ-IFL 178 +Q+ P + LD P +I L+R+ R E + LDY +R + R ++ Sbjct: 105 LQDFKHVEQPTHYLFLDCPAEICLERIAKRQRECEQSLPLDYLKRVEKAH----RDWGYM 160 Query: 179 -DIARNQPDRCHIVDSAH--SFQSVATNILNIVWELVQKRV 216 + A +VDS+ +++A ++ +V +RV Sbjct: 161 GEWAGQ----VTVVDSSGYVDLEALAEHVKTVVKIKAGERV 197 >gi|301307897|ref|ZP_07213853.1| hypothetical protein HMPREF9008_03638 [Bacteroides sp. 20_3] gi|300834240|gb|EFK64854.1| hypothetical protein HMPREF9008_03638 [Bacteroides sp. 20_3] Length = 212 Score = 58.5 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 71/221 (32%), Gaps = 32/221 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62 +I G++G+GKTT I ++ L+ + V + + L E Sbjct: 3 KYIIISGVDGSGKTTVIEGVRAQLEAEGKTVGYIWMRYHHKLIKIMHAIAKLTGLSKKEN 62 Query: 63 GAEAEAIVFAAARL------DHVENVIRPALMEGK-------ILLCDRFLDSSYAYQGER 109 A E + + + I L K ++CDR+++ G Sbjct: 63 TAMGEMWLHYFYKSPLFCWFYLYSSYIDSWLARKKPTKLRTDYVICDRWVNDIIIDMGSE 122 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVM 168 + + ++ + + + + V +R C E + Sbjct: 123 THNLDILDGKWYKLYQRLL-----------PNDSFQFVISRNREDVLNC--RIENTFNEA 169 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + R ++ IA+ P+ +D+ S + + ++ + Sbjct: 170 FDYRFR-LYQKIAQK-PEVIK-IDNTGSIEKSVSLVIESIR 207 >gi|157134045|ref|XP_001663120.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Aedes aegypti] gi|94469044|gb|ABF18371.1| mitochondrial NADH-ubiquinone oxidoreductase [Aedes aegypti] gi|108870616|gb|EAT34841.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Aedes aegypti] Length = 407 Score = 58.5 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 25/175 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 + +G AGK+ L L+ K + R + Sbjct: 88 VVVDGPIAAGKSAFAKELATELEMKYFPEATMDNYYINSYGYDLRKLDPQLPPSMQSFDV 147 Query: 54 ---LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-- 108 L + ++ R + + G+ ++ DR + S + + Sbjct: 148 SKFLQNPNDKNVATFQIRMLM--QRYSQYIDALAHLFSTGEGVVLDRCVYSDFVFVEAMF 205 Query: 109 -----RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 ++ ++ D ++ + + P I LD+PV + R++ R + E Sbjct: 206 KNGYMSKGARSVYYDLVKNTFSELMKPHLVIYLDVPVSVVKDRIKKRGNPAEVNS 260 >gi|198283565|ref|YP_002219886.1| deoxynucleoside kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218666294|ref|YP_002426191.1| deoxyguanosine kinase/deoxyadenosine kinase, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248086|gb|ACH83679.1| deoxynucleoside kinase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518507|gb|ACK79093.1| deoxyguanosine kinase/deoxyadenosine kinase, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 203 Score = 58.5 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 69/222 (31%), Gaps = 33/222 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S IS EG GAGKT+ L + L + + P + + L Sbjct: 1 MTSPRIISIEGPMGAGKTSLARQLAQSLGGRMILEAPAQNPFLSRFYQGPGAAL------ 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 E F R + L+ D + D+ +H + Sbjct: 55 ----ATELQFFMQRREQ------WRHRDDSSWLISDHSARKDEIFTPLTLDAEEHHLFNE 104 Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 L+ P D I LD P+ + +KR++ R E A DY + + + Sbjct: 105 LRMALDFHPAPADLMIFLDAPLAVLMKRIRARGDAYEQALAPDYL--------ARVQAAY 156 Query: 178 LDIARNQPDRCHIVDSAHSFQSVA-----TNILNIVWELVQK 214 N VDSA V +++ V ++ Sbjct: 157 RAWQANYALPRMNVDSAQ-VDFVHDPRHTERLIDAVRHRLKD 197 >gi|157162466|ref|YP_001459784.1| hypothetical protein EcHS_A3166 [Escherichia coli HS] gi|188495312|ref|ZP_03002582.1| conserved hypothetical protein [Escherichia coli 53638] gi|193062168|ref|ZP_03043264.1| conserved hypothetical protein [Escherichia coli E22] gi|194426247|ref|ZP_03058802.1| conserved hypothetical protein [Escherichia coli B171] gi|260845746|ref|YP_003223524.1| hypothetical protein ECO103_3670 [Escherichia coli O103:H2 str. 12009] gi|157068146|gb|ABV07401.1| conserved hypothetical protein [Escherichia coli HS] gi|188490511|gb|EDU65614.1| conserved hypothetical protein [Escherichia coli 53638] gi|192932388|gb|EDV84986.1| conserved hypothetical protein [Escherichia coli E22] gi|194415555|gb|EDX31822.1| conserved hypothetical protein [Escherichia coli B171] gi|257760893|dbj|BAI32390.1| conserved hypothetical protein [Escherichia coli O103:H2 str. 12009] Length = 230 Score = 58.5 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V ++ + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDVEKAITDFMTAR 227 >gi|289548521|ref|YP_003473509.1| adenylate kinase [Thermocrinis albus DSM 14484] gi|289182138|gb|ADC89382.1| adenylate kinase [Thermocrinis albus DSM 14484] Length = 213 Score = 58.5 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 59/238 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T L + VH+ + R + + A Sbjct: 1 MILVFLGPPGAGKGTQAKRLVE----ERRFVHLA-------TGDLLRSAVRNMTPLGMKA 49 Query: 65 EAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + R V +I AL + ++ D F R Q L+ Sbjct: 50 KE-----YMDRGDLVPDQLVIQMIEEALPQEGDVILDGF---------PRTIPQAQALE- 94 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY---- 161 +S D I D+ + ++R+ R +E D Sbjct: 95 -NMLSSHGKKVDKVIFFDVEDSVLIERLTGRRVCPNCGAVYHIKYNPPKEDEICDRCGTK 153 Query: 162 -FERKDV--MIHEKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +R+D +R +++ + ++ I+D++ V +IL + + Sbjct: 154 LIQREDDREDTVRRRLEVYRTQTAPLVDFYQKRNKLIILDASKPQDEVYASILKAIED 211 >gi|256821578|ref|YP_003145541.1| deoxynucleoside kinase [Kangiella koreensis DSM 16069] gi|256795117|gb|ACV25773.1| deoxynucleoside kinase [Kangiella koreensis DSM 16069] Length = 217 Score = 58.5 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKTT L L + + P E + Sbjct: 11 FIAVEGPIGVGKTTLARRLSEALSSD----LILEQAEENPFLE---RFYQDPKSGALPTQ 63 Query: 66 AEAIVFAAARLDHVEN--VIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDSLQE 122 + +L V + P + ++ DR F S+ D + + + + Sbjct: 64 LYFLFQRVRQLQEVRQSDMFSPVRVADYLMEKDRLFARSTL------DQDELRLYEQVYQ 117 Query: 123 -ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 +++ PD I L V + L+R++ R ES Sbjct: 118 NLTIDAPKPDLVIYLQASVPVLLERIKKRGRASES 152 >gi|261326659|emb|CBH09621.1| adenylate kinase, putative [Trypanosoma brucei gambiense DAL972] Length = 260 Score = 58.5 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 59/241 (24%) Query: 1 MNSGL----FISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARH 52 M G+ FI+ G G+GK T + L +TR H Sbjct: 44 MRRGIPLQIFIA--GPAGSGKRTQCKNIADRLGVVLISSGQ--VLTRGVESGSETSQLAH 99 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 +S G + + RL + + L+EG R++ Sbjct: 100 SYVSRGERV--PDTLVSMIMKDRLSQSDACEKGWLVEGY----------------PRNAQ 141 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY----SLRESACLD-------- 160 Q ++ V+P I+LDLP D+ +R+++R + +E LD Sbjct: 142 QAQAVEEC------GVIPQVFILLDLPEDLSFRRLEHRRYDPATNKEYHMLDNPPPAEDV 195 Query: 161 ----YFERKDVMIHE----KRRQIFLDI---ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 ++D HE + Q + I ++ +VD+ S + V +IL V Sbjct: 196 ALCERLVQRDADFHESIAKRLAQYYESIEGVKKHLGAVIEVVDARKSVEDVERDILAAVE 255 Query: 210 E 210 + Sbjct: 256 K 256 >gi|225454048|ref|XP_002263322.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297744838|emb|CBI38106.3| unnamed protein product [Vitis vinifera] Length = 210 Score = 58.1 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 49/209 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + Y A + R + S + Sbjct: 29 GGPGSGKGTQCANIVKHF---GY--------THLSAGDLLRAEIKSGSENG--------- 68 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFL--DSSYAYQGERDSSQHLFLDSLQ 121 N+I+ + EGKI+ L R + DS+ + + + + Sbjct: 69 ----------NMIQSMIKEGKIVPSEVTIKLLQRAILEDSNDKFLIDGFPRNEENRAAFE 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178 +V ++ P+ + D + +R+ NR RE ++ ++ + E + + Sbjct: 119 --AVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVIEYY- 175 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207 + +D+A S + V + + Sbjct: 176 ----ESKGKVRKIDAAQSIEEVFEAVKAV 200 >gi|88191971|pdb|2A2Z|A Chain A, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine And Uridine Diphosphate gi|88191972|pdb|2A2Z|B Chain B, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine And Uridine Diphosphate gi|88191973|pdb|2A2Z|C Chain C, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine And Uridine Diphosphate gi|88191974|pdb|2A2Z|D Chain D, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine And Uridine Diphosphate gi|88191975|pdb|2A30|A Chain A, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine gi|88191976|pdb|2A30|B Chain B, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine gi|88191977|pdb|2A30|C Chain C, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine gi|88191978|pdb|2A30|D Chain D, Crystal Structure Of Human Deoxycytidine Kinase In Complex With Deoxycytidine Length = 248 Score = 58.1 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 29/227 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE----F 62 IS EG AGK+T +++LK+ + ++V EP + +VL F Sbjct: 27 ISIEGNIAAGKSTFVNILKQLCED--WEVVP--EPVARWCNVQSTNVLQMMYEKPERWSF 82 Query: 63 GAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + A + + R +++ +P L + + DR++ +S Y+ E + Sbjct: 83 TFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWT 141 Query: 117 L-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-----K 165 + D + Q + D I L + L R+ R E L+Y E+ + Sbjct: 142 IYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHE 201 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++H + F D + P +D F+ +++ V E + Sbjct: 202 SWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 245 >gi|167586237|ref|ZP_02378625.1| deoxynucleoside kinase [Burkholderia ubonensis Bu] Length = 228 Score = 58.1 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 46/161 (28%), Gaps = 14/161 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTTLARLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + FA R + AL G+ ++ D + + L Sbjct: 71 Q---LAFALQRAQQAREL-NAALDTGRPVVADFMPQKNEIFARLNLPEDEWQLYRALAAH 126 Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 V PD + L ++ R+Q R E D + Sbjct: 127 VDAPRASAPDLVVYLQASPEVLFARIQKRGLPMELQISDAY 167 >gi|158314644|ref|YP_001507152.1| thymidylate kinase-like protein [Frankia sp. EAN1pec] gi|158110049|gb|ABW12246.1| Thymidylate kinase-like protein [Frankia sp. EAN1pec] Length = 204 Score = 58.1 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 45/209 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ EG +GKTT L + + + V EP +++ + F E Sbjct: 8 VAIEGTHASGKTTLTHALAAYYRERGVHVACVPEPARNSP--FIEEIVVHGRGE-FDLET 64 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E +FAA + + +R A + +++CD+ + + AY Sbjct: 65 EVDLFAA----QLSSQLRVA-RQHTMVICDKTVANVLAYAWLVLPGGPDG---------- 109 Query: 127 EVMPDCTIILDLPVDIGLK---RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 P PV ++ R C D F++ + Sbjct: 110 ---PH------APVLHAMETFCRAWAHVYDAVFYCCDRFDQ---------------LQAG 145 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELV 212 P R ++D + V +I V + + Sbjct: 146 DPYRSKVLDIQPAADRVVRSICATVGQRI 174 >gi|161525798|ref|YP_001580810.1| deoxynucleoside kinase [Burkholderia multivorans ATCC 17616] gi|189349481|ref|YP_001945109.1| deoxyguanosine kinase [Burkholderia multivorans ATCC 17616] gi|160343227|gb|ABX16313.1| deoxynucleoside kinase [Burkholderia multivorans ATCC 17616] gi|189333503|dbj|BAG42573.1| deoxyguanosine kinase [Burkholderia multivorans ATCC 17616] Length = 228 Score = 58.1 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTTLARLLAERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + + FA R +I AL G+ ++ D + Q ++ + ++ Sbjct: 71 Q---LSFALQRAQQSAELI-GALDTGRPVVAD------FMPQKNDIFARLNLPEDEWQLY 120 Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + + PD + L ++ R+Q R E D + Sbjct: 121 RSIAAHLEAPRAPAPDLVVYLQASPEVLFARIQKRGLPMELQISDAY 167 >gi|150024501|ref|YP_001295327.1| bifunctional 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase/deoxynucleoside kinase [Flavobacterium psychrophilum JIP02/86] gi|149771042|emb|CAL42509.1| Probable bifunctional protein : 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase and deoxynucleoside kinase [Flavobacterium psychrophilum JIP02/86] Length = 380 Score = 58.1 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 77/220 (35%), Gaps = 28/220 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKTT + + + K P F E Sbjct: 180 YIAIEGNIGAGKTTLTTKIAQDFNAKTVLERFADNPFLP-------KFYKDQNRYAFPLE 232 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124 F A R + + + + ++ D + S + L +L +I Sbjct: 233 MS---FLADRYQQLSDDLSQFDLFKDFVVTDYHIFKSLIFAKVTLQEDEFRLYKTLFDII 289 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDIAR 182 +E PD + L D L+ ++ R +E++ + EK +LD + Sbjct: 290 YKEMTKPDLYVYLYQNTDRLLQNIKKRGRS--------YEQEIEAEYLEKINHGYLDYIK 341 Query: 183 NQPD-RCHIVDSAHSFQSVATN-----ILNIVWELVQKRV 216 +Q D ++D + F V IL+I+ E + ++ Sbjct: 342 SQTDLNVLVIDVS-DFDFVEKQEDYVKILDIIQEKLDLQI 380 >gi|161019168|ref|NP_001104312.1| thymidylate kinase [Gallus gallus] gi|53126198|emb|CAG30937.1| hypothetical protein RCJMB04_1b4 [Gallus gallus] Length = 170 Score = 58.1 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 G I EG++ AGK+T L + LQ + + R PG Sbjct: 5 RGALIVLEGMDRAGKSTQCRRLVQALQAAGHRADLLRFPG 44 >gi|225719692|gb|ACO15692.1| Deoxynucleoside kinase [Caligus clemensi] Length = 225 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 75/214 (35%), Gaps = 33/214 (15%) Query: 6 FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG G+GK+T + + + K +V + EP + ++L Sbjct: 12 FIVAVEGNVGSGKSTMLR----YFKSKG-EVRIYPEPVDSWRNVGGENLL---NNLYKDP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY------QGERDSSQHLFL 117 + + F + ++ EG + + +R + S+ + + +G + L Sbjct: 64 QRCSFTFQSYVQLTRLKILEDVSTEGGVKIIERSIQSNDFVFLKTAQKRGTLSDVELQVL 123 Query: 118 DSLQEISVQEVM--P-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEK- 172 DS + P D + L ++ R+ R E LDY + +H+ Sbjct: 124 DSYHSWIRNSTITNPIDLIVYLRTTPEVAHARLCKRARSEEKTVPLDYLQ----DLHDSY 179 Query: 173 ----RRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202 R+++ P ++D+ S V Sbjct: 180 EDWLMRKVY----GQPPAPVLVIDANQSLSMVEK 209 >gi|225708974|gb|ACO10333.1| Thymidine kinase 2, mitochondrial precursor [Caligus rogercresseyi] Length = 290 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 84/234 (35%), Gaps = 40/234 (17%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LS-CGV 59 N I+ EGI G GKTT + +K + EP +L L+ Sbjct: 62 NKPFIINVEGIVGTGKTTFLDYMKEYPYMDILP-----EPINKWTNLNGTDLLGLAFENP 116 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHL- 115 + E+ V +H+ RP G + + +R S+ ++ Q Sbjct: 117 SRWSMTQESYVQLTLTEEHL----RPY---GIVKIMERSPHSAISVFSRQFYEAGQMTEV 169 Query: 116 FLDSLQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER----- 164 + L ++ D TI L L ++ KRV R + E L++ +R Sbjct: 170 EFNVLNAWYNFLNDKLDLTTDLTIYLRLDPELAYKRVLERGRIEEKNLSLNFLKRLHRLH 229 Query: 165 KDVMIHEKRRQIFLDIARNQP-DRCHIVDSAHSFQS---VATNILNIVWELVQK 214 D +IH+ ++L P ++D++ + ++ +W+ + K Sbjct: 230 DDWLIHQNT-SMYL------PTGNILVIDTSRPLDEMEMIYKHLGKKIWKEIPK 276 >gi|170698321|ref|ZP_02889396.1| deoxynucleoside kinase [Burkholderia ambifaria IOP40-10] gi|171320260|ref|ZP_02909316.1| deoxynucleoside kinase [Burkholderia ambifaria MEX-5] gi|170136740|gb|EDT04993.1| deoxynucleoside kinase [Burkholderia ambifaria IOP40-10] gi|171094489|gb|EDT39547.1| deoxynucleoside kinase [Burkholderia ambifaria MEX-5] Length = 228 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 49/164 (29%), Gaps = 20/164 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E A Sbjct: 18 RYLVIEGPIGVGKTTLARLLGERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123 + + FA R +I AL G+ ++ D + L I Sbjct: 71 Q---LSFALQRAQQARELI-GALDTGRPVVAD---YMPQKNDIFARLNLPEDEWQLYRSI 123 Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + Q PD + L ++ R+Q R E D + Sbjct: 124 ATHLDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|71894163|ref|YP_278271.1| deoxyguanosine kinase [Mycoplasma synoviae 53] gi|71850951|gb|AAZ43560.1| deoxyguanosine kinase [Mycoplasma synoviae 53] Length = 217 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 79/222 (35%), Gaps = 26/222 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63 + ++ G+ +GK+T + L + +++ L + Sbjct: 1 MIVAVSGMISSGKSTLVKKLNSHYENN--SLYLDEYKKDDEIFSTMLRWFLEKRENINLS 58 Query: 64 AEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSS-----QHL 115 + + ++ ++ + + L DRF + +A + D + Sbjct: 59 FDLYVLNH---HIESLKEIYEEFNEKFTKDDYLFLDRF-PAEHAIFNKMDLVTNLNHKLA 114 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----KDVMIH 170 + +L + V ++ PD + LD+ R+ R E +D FE K++ + Sbjct: 115 YDKALDNLLVNQIKPDLVLYLDIDFKTFQNRLTQRSRSEE---VDNFENNIDYWKNLHMF 171 Query: 171 EKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWEL 211 K Q FL++ + + I+D+ V T ++++ Sbjct: 172 YK--QYFLELCKKYQIKYQIIDTNNLDEGQVLTKAISLIETF 211 >gi|268573866|ref|XP_002641910.1| C. briggsae CBR-NUO-4 protein [Caenorhabditis briggsae] gi|187026391|emb|CAP34527.1| CBR-NUO-4 protein [Caenorhabditis briggsae AF16] Length = 436 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 75/230 (32%), Gaps = 34/230 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGG---TPAAEAARHVLL 55 I EG G+GKTT L L + + D+ + R + AR+ L Sbjct: 73 KLIVIEGNIGSGKTTLAKQLADQLGFVHFPEFRMDDILIDRYGNDLRNYYSKFPARYRLP 132 Query: 56 SCGVDEFGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + E R+ D N + L G+ ++ +R S + + Sbjct: 133 DISMFYKNPSGELSAAMQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMR 192 Query: 111 SSQHL---------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 ++ F+ + P + L+ P L+ ++ R + E A +D Sbjct: 193 DKNYIGHEYFKHYYFVRK-NALPQLHFWPHLVVYLNTPTSKCLENIKRRGNTDEIATVD- 250 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAHS--FQSVATNILNI 207 ER + + + D R + I+ D +V +I + Sbjct: 251 -ER----YLKTIEESYKDSLREYRNHSKILAYDWTKPGDTDAVVEDIERL 295 >gi|312382540|gb|EFR27963.1| hypothetical protein AND_04737 [Anopheles darlingi] Length = 395 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 25/175 (14%), Positives = 53/175 (30%), Gaps = 25/175 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 + +G AGK+ L L+ K + P R + Sbjct: 76 VVVDGPIAAGKSAFAKELASELEMKYFPEPTMDNYYVNPYGYDLRQLDPKLPETMRSFDV 135 Query: 54 ---LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-- 108 L ++ R + + G+ ++ DR + S + + Sbjct: 136 AKFLQDPTHRNVATFQVRMLVE--RFSQYIDALAHLFSTGEGVVLDRSVYSDFVFLEAMF 193 Query: 109 -----RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 ++ ++ D ++ + P I LD+PV++ R++ R E Sbjct: 194 RNGYISKGARSVYYDLVKNTFCDLMKPHLVIYLDVPVNVVKDRIKKRSHPAEVGS 248 >gi|74318070|ref|YP_315810.1| deoxynucleoside kinase [Thiobacillus denitrificans ATCC 25259] gi|74057565|gb|AAZ98005.1| deoxynucleoside kinase [Thiobacillus denitrificans ATCC 25259] Length = 213 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 61/199 (30%), Gaps = 41/199 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 +I EG GAGKT+ L L+ + + R E R+ L Sbjct: 7 RYIVVEGPIGAGKTSLTHKLAERLGADLLLENAGDNPFLPRFYQ-----EPRRYAL---- 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F R + ++ + L + D +D + L Sbjct: 58 -----PTQLHFLF--DRSRQLRDLGQGDLFRSGTV-SDFLIDKDMLFARLNLDDDEFELY 109 Query: 119 S--LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++ Q PD I L P + +RV+ R + Sbjct: 110 QKVYADLAPQAATPDLVIYLQAPTETLHERVRRR---------------GIDFERGMDAA 154 Query: 177 FLD-IARNQPDRCHIVDSA 194 +L+ +A + + H D+A Sbjct: 155 YLERLANSYSEFFHRYDAA 173 >gi|241758681|ref|ZP_04756795.1| deoxyguanosine kinase [Neisseria flavescens SK114] gi|241321192|gb|EER57388.1| deoxyguanosine kinase [Neisseria flavescens SK114] Length = 211 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 58/155 (37%), Gaps = 16/155 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN +I EG G+GKT L ++ P P + + G Sbjct: 1 MNP-RYIVVEGAIGSGKTALSRRLAEHFSAL----LLSENPDHNPFLMKFYSNVSNNG-- 53 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117 A + F R + V N+I +G +++ D FL D + D Q LF Sbjct: 54 ----LAAELFFLTRRAESV-NIIDDQCAQGGMVVAD-FLPEKDRIFTPIVLNDDEQQLFA 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q I Q PD I L V+ KR+Q R+ Sbjct: 108 DMKQRILPQYAEPDVVIYLQTAVENNRKRLQKRHE 142 >gi|322823023|gb|EFZ28892.1| hypothetical protein TCSYLVIO_4870 [Trypanosoma cruzi] Length = 261 Score = 58.1 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 22/171 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N I EGI+G GK+ L L + R P LS + Sbjct: 49 NQKTLIVLEGIDGVGKSLVAQSLIEKL---GDSAVLIRTPHPD----------LSGIRET 95 Query: 62 FGAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117 F A+ E A F +A A E KI++ DR+ S+ A Sbjct: 96 FRAQTEETARAFYSAANYLAAWDAFHATKERKIVVFDRWWCSTCAMALANSCRLAALPAA 155 Query: 118 -DSLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 D++ + +P + +L + I R++ R +++ Sbjct: 156 GDAIYQWPQD--LPPFQLGALLYVEEHIRQARIRQRAPEDAEERRLRAQQE 204 >gi|241997794|ref|XP_002405626.1| secreted NADH-ubiquinone oxireductase, putative [Ixodes scapularis] gi|215493731|gb|EEC03372.1| secreted NADH-ubiquinone oxireductase, putative [Ixodes scapularis] Length = 478 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 30/232 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------L 54 I EG G GKT L L K + + R + + Sbjct: 150 IVLEGNIGVGKTALAKSLADELGMKYFGEPSFDQLYVDEYGFDLRSIDHLAPEACRTCDI 209 Query: 55 LS--CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + ++ R + + + L G+ ++ +R S + + Sbjct: 210 KKFYEDPHNVNVASMQMIMFQLRFERYLDALVHLLNTGEGVVLERSPFSDFVFAETMHKF 269 Query: 113 QHLFLDSLQEISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 ++ +L+ ++ + + P I LD P ++ L+R++ R E ++ Sbjct: 270 GYISKLALKAYNLMKEAGLPELLRPHLVIYLDAPSNVLLQRIKERNIPYEVQSK-VLTKE 328 Query: 166 DVMIHEKRR-QIFLDIARNQPD----RCHIVDSAHSFQSVATNILNIVWELV 212 + ++ Q +L R+ + + F+ V +I I +E + Sbjct: 329 YLDEIDRLYKQSYLRSIRDNSELLLYDWTTI---GEFELVVDDIERINFEAL 377 >gi|167571121|ref|ZP_02363995.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia oklahomensis C6786] Length = 227 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E A Sbjct: 18 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + +H I A ++ D F+ + +A D L+ Sbjct: 71 Q----LAFALQREHQAREIAAAYEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFARIQKRGQPMELQIGDAY 166 >gi|146320507|ref|YP_001200218.1| thymidylate kinase [Streptococcus suis 98HAH33] gi|145691313|gb|ABP91818.1| Thymidylate kinase [Streptococcus suis 98HAH33] Length = 48 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 16/32 (50%), Positives = 20/32 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32 M +G FI+FEG +GAGKTT + L LQ Sbjct: 11 MRNGFFITFEGPDGAGKTTVLQQLLPALQAIG 42 >gi|325187770|emb|CCA22315.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 240 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 37/211 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G+GKT ++ ++ + Y V + + +L Sbjct: 20 ICLEGCHGSGKT----VICNEMRAQGYPVLDEAFIDMPSYSLDPQSLL--METIWVCNWF 73 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS------L 120 ++I+ +RL + +I++ DR S+ AY Q L L L Sbjct: 74 QSILQLESRLHRTSK-------KHQIVIVDRSPFSAIAYARNGHLLQPLILQQMQEIQSL 126 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ---IF 177 + I V +D+ D+ R+ R E + + HE + Sbjct: 127 RRIQFHTVR------IDVDPDVLYARICVRLEQ---------EPERMRFHESDKNWMHTI 171 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L P + + + + V +IL+ V Sbjct: 172 LTFYNAFPWDFTVKNESSDIRKVVLDILHRV 202 >gi|155122111|gb|ABT13979.1| hypothetical protein MT325_M425R [Paramecium bursaria chlorella virus MT325] Length = 186 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 77/213 (36%), Gaps = 40/213 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ EG+ GAGK++ + + LQ++ V EP + + + Sbjct: 4 IAIEGLMGAGKSSVL----QELQKRGIRVIA--EPTQDW--KYLDKFYGNRKKYALTLQI 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV- 125 E ++ ++++ +R S + + SS+ + D ++++ Sbjct: 56 EILLSF-----------LKYKFSNELVVVERSPQVSRSVFAKMLSSEGILSD--EDMATY 102 Query: 126 ----QEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 P D I+LD P +I ++R +R + + + +K +IF Sbjct: 103 VDIYDLAKPWEADMYIMLDCPTEICVERTGSRGDSYKITP------EYMKDLKKYYEIFF 156 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 C V+S V +++ I+ + Sbjct: 157 KYTD-----CKRVNSDRPINDVVDDVMEIISQA 184 >gi|300309953|ref|YP_003774045.1| deoxynucleoside kinase [Herbaspirillum seropedicae SmR1] gi|300072738|gb|ADJ62137.1| deoxynucleoside kinase protein [Herbaspirillum seropedicae SmR1] Length = 213 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 14/163 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ +G GAGKT+ + L + + G AE R Sbjct: 7 RYIAIDGPIGAGKTSLATRLATLW---GAQALLEQPEGNPFLAEFYRDAARH------AF 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQ-E 122 + +A F R+ ++ + PAL EG+ + D L+ + + Q + D+L + Sbjct: 58 QTQAF-FLLQRMGQLQAPLDPALAEGRF-IADFMLEKNILFAQLTLAGDELALYDALHRQ 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164 + Q +PD I L P ++ R+ R E A LDY +R Sbjct: 116 LQPQVRIPDLVIHLQAPPEVLQARIGARGIAMEQAISLDYLQR 158 >gi|195390295|ref|XP_002053804.1| GJ23142 [Drosophila virilis] gi|194151890|gb|EDW67324.1| GJ23142 [Drosophila virilis] Length = 408 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 24/224 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---------LLSC 57 I EG +GKT L L + + P R + Sbjct: 86 ICVEGPIASGKTKFAQELATELDMQYFPAVDLDLIYINPYGYDMRKLDPQLPPSCRSYDV 145 Query: 58 GVDEFGAEAEAIVFAAARLDHVE-----NVIRPALMEGKILLCDRFLDSSYAY------Q 106 E R+ + + ++ G+ ++ +R S + + Q Sbjct: 146 KDFCRDPNHELAALFQIRMYMLRVSQYIDALQHIFSTGQGVVLERSPYSDFVFMEAMFRQ 205 Query: 107 GERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 G + L++ ++ E+ P I LDLPVD K+++ R E + E Sbjct: 206 GYISRGARSVYNDLRQNTIGELLKPHLVIYLDLPVDAVQKQIKARNLEYEVKSKVFTEAY 265 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + +Q +L + I D + + V +I I Sbjct: 266 LRDLEALYKQQYLKDIAGHAE-LLIYDWSAGGETEVVVEDIERI 308 >gi|109287907|ref|YP_654601.1| hypothetical protein MIV029R [Invertebrate iridescent virus 3] gi|123873273|sp|Q197D1|VF143_IIV3 RecName: Full=Putative kinase protein 029R gi|106073530|gb|ABF82059.1| hypothetical protein MIV029R [Aedes taeniorhynchus iridescent virus] Length = 193 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 33/201 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS EGI G+GK++ + LKR Y H +EP + LL D+ A Sbjct: 5 ISIEGIIGSGKSSLMDQLKRH-----YTCH--QEPLHDWS-------LLQPFYDDMERYA 50 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 F H + + I+ +++ +R SS + E+ + Sbjct: 51 SPFQFQVLFSFHKLYSTIK---NVNDVVILERCPWSSRNIFTKMLVQDGFISPQEYELYM 107 Query: 126 Q-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL-D 179 + I L + + R+ R E + + + Sbjct: 108 SFYDRLAFTTNLHIYLKVDPTVAFDRILKRNREAEKTL-------QYDYLVRLNHQYEAE 160 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 I++ D ++VD+ + V Sbjct: 161 ISKC--DNVYVVDANKPMELV 179 >gi|256851657|ref|ZP_05557045.1| deoxyadenosine kinase [Lactobacillus jensenii 27-2-CHN] gi|260661626|ref|ZP_05862538.1| deoxyadenosine kinase [Lactobacillus jensenii 115-3-CHN] gi|256615615|gb|EEU20804.1| deoxyadenosine kinase [Lactobacillus jensenii 27-2-CHN] gi|260547683|gb|EEX23661.1| deoxyadenosine kinase [Lactobacillus jensenii 115-3-CHN] Length = 217 Score = 57.7 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + V++ P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 52 Query: 67 EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115 + + I AL E ++ DR + D+ + A G D ++ + Sbjct: 53 FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 107 Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++D + + PD I +++ +D L R++ R E D ++ + Sbjct: 108 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDTMLSRIKRRGREFEQLETDPSLKE---YY 164 Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211 + R + N D+ + VD+ ++V I N + EL Sbjct: 165 ARLRNYYEPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 214 >gi|282933307|ref|ZP_06338693.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1] gi|297205265|ref|ZP_06922661.1| deoxyadenosine kinase [Lactobacillus jensenii JV-V16] gi|281302603|gb|EFA94819.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1] gi|297149843|gb|EFH30140.1| deoxyadenosine kinase [Lactobacillus jensenii JV-V16] Length = 216 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + V++ P +L + Sbjct: 4 IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 51 Query: 67 EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115 + + I AL E ++ DR + D+ + A G D ++ + Sbjct: 52 FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 106 Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++D + + PD I +++ +D L R++ R E D ++ + Sbjct: 107 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDTMLSRIKRRGREFEQLETDPSLKE---YY 163 Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211 + R + N D+ + VD+ ++V I N + EL Sbjct: 164 ARLRNYYEPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 213 >gi|84043858|ref|XP_951719.1| adenylate kinase [Trypanosoma brucei TREU927] gi|33348700|gb|AAQ16024.1| adenylate kinase, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|62358534|gb|AAX78995.1| adenylate kinase, putative [Trypanosoma brucei] Length = 260 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 82/241 (34%), Gaps = 59/241 (24%) Query: 1 MNSGL----FISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARH 52 M G+ FI+ G G+GK T + L +TR H Sbjct: 44 MRRGIPLQIFIA--GPAGSGKRTQCKNIADRLGVVLISSGQ--VLTRGVESGSETSQLAH 99 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 +S G + + RL + + L+EG R++ Sbjct: 100 SYVSRGERV--PDTLVSMIMKDRLSQSDAREKGWLVEGY----------------PRNAQ 141 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY----SLRESACLD-------- 160 Q ++ V+P I+LDLP D+ +R+++R + +E LD Sbjct: 142 QAQAVEEC------GVIPQVFILLDLPEDLSFRRLEHRRYDPATNKEYHMLDNPPPAEDV 195 Query: 161 ----YFERKDVMIHE----KRRQIFLDI---ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 ++D HE + Q + I ++ +VD+ S + V +IL V Sbjct: 196 ALCERLVQRDADFHESIAKRLAQYYESIEGVKKHLGAVIEVVDARKSVEDVERDILAAVE 255 Query: 210 E 210 + Sbjct: 256 K 256 >gi|195111046|ref|XP_002000090.1| GI10047 [Drosophila mojavensis] gi|193916684|gb|EDW15551.1| GI10047 [Drosophila mojavensis] Length = 252 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 32/203 (15%), Positives = 70/203 (34%), Gaps = 24/203 (11%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64 EG G+GKTT ++ Q+ + DV + EP ++L Sbjct: 25 IEGNIGSGKTTFLN----HFQKYDKDVCLITEPVEKWRNVNGVNLLEKMYKDPQKWAMPF 80 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ + + + + R+ Y S + ++LQE Sbjct: 81 QSYVTLTMLQAHTAATDKKLKIIERS--IFSSRYCFVENMY--RNGSLELGMYNTLQEWY 136 Query: 125 VQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V D I L ++ +R++ R ES + ++ +HE Sbjct: 137 KFIAESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----WL 191 Query: 180 IARNQPDRCH--IVDSAHSFQSV 200 I + +P +C ++++ + +++ Sbjct: 192 IHQRRPQQCKVLVLNADLNLENI 214 >gi|115350704|ref|YP_772543.1| deoxynucleoside kinase [Burkholderia ambifaria AMMD] gi|115280692|gb|ABI86209.1| deoxynucleoside kinase [Burkholderia ambifaria AMMD] Length = 228 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 49/164 (29%), Gaps = 20/164 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E A Sbjct: 18 RYLVIEGPIGVGKTTLARLLGERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123 + + FA R +I AL G+ ++ D + L I Sbjct: 71 Q---LSFALERAQQARELI-GALDTGRPVVAD---YMPQKNDIFARLNLPEDEWQLYRSI 123 Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + Q PD + L ++ R+Q R E D + Sbjct: 124 ATHLDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|109101925|ref|XP_001099309.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like isoform 1 [Macaca mulatta] Length = 448 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 54/229 (23%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F ++ EG++ GKTT + L+ V + P + R + Sbjct: 247 QKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DDE 297 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LD 118 A ++ + + + ++ DR+ S+ Y + S L L Sbjct: 298 PTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLP 352 Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLR-------ESACLD 160 Q D + + L+R+Q R + E+ + Sbjct: 353 PAHHPVYQWPE-------DLLKPDLILLLTVSPEERLQRLQGRGMEKTREEAELEANSV- 404 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ + V +L+++ Sbjct: 405 --------FRQKVEMSYQRM--ENPG-CHVVDASPCREKVLQTVLSLIQ 442 >gi|296537404|ref|ZP_06899251.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957] gi|296262270|gb|EFH09048.1| thymidylate kinase [Roseomonas cervicalis ATCC 49957] Length = 44 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 18/38 (47%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 G FI+ EG EGAGKTT L L V TR Sbjct: 7 TQGRFITLEGGEGAGKTTLARALSSRLAAAGLPVLRTR 44 >gi|269839810|ref|YP_003324503.1| Thymidylate kinase-like protein [Thermobaculum terrenum ATCC BAA-798] gi|269791540|gb|ACZ43680.1| Thymidylate kinase-like protein [Thermobaculum terrenum ATCC BAA-798] Length = 603 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 61/208 (29%), Gaps = 34/208 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--------RHV 53 +G+ +SF GI+G+GKT H L GG+ A R Sbjct: 357 QAGMVVSFSGIDGSGKTAHARALAEAFSLCELQARYFWCRGGSTGLLALASRARALLRRN 416 Query: 54 LLSCGVDEFGAEAEAIVFAAARL---------DHVENVIRPALME--GKILLCDRFLDSS 102 + D + R + ++ L GKI++CDR++ + Sbjct: 417 RRASNPDAVLRRRRELAHPLLRWGWTWGVALDQVLSYLVGVHLRARTGKIVVCDRYIYDA 476 Query: 103 YAYQGERDSSQHLFLDSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + + ++ PD +LDL R E Sbjct: 477 AVEVLASLPKEDRMTRAAIAFMLRVVPRPDLGYLLDLEPSDARARKPEEPWHSELDAE-- 534 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCH 189 R+++L++A R Sbjct: 535 ------------RRLYLELADRFGLRVV 550 >gi|195055660|ref|XP_001994731.1| GH14441 [Drosophila grimshawi] gi|193892494|gb|EDV91360.1| GH14441 [Drosophila grimshawi] Length = 252 Score = 57.3 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 24/206 (11%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT ++ + Q+ +V + EP ++L + A Sbjct: 25 IEGNIGSGKTTFLN----YFQKYKNEVTLITEPVEKWRNVNGVNLL---DKMYKDPKKWA 77 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEIS 124 + F + + A + K+ + +R + S+ Y + S + ++LQE Sbjct: 78 MPFQSYVTLTLLQA-HTAATDKKLKILERSIYSARYCFVENMYRNGSLEPGMYNTLQEWF 136 Query: 125 VQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V D I L ++ +R++ R ES + ++ +HE Sbjct: 137 KFIDEAIHVQADLIIYLRTSPEVAYERIRERARSEESCVPLKYLQELHELHED-----WL 191 Query: 180 IARNQPDRCHIV--DSAHSFQSVATN 203 I +P C ++ D+ + + + Sbjct: 192 IHHRRPQHCKVLVMDADLKLEDIISE 217 >gi|17933656|ref|NP_524445.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform A [Drosophila melanogaster] gi|24648886|ref|NP_732692.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform B [Drosophila melanogaster] gi|12644364|sp|P91929|NDUAA_DROME RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|7300804|gb|AAF55947.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform A [Drosophila melanogaster] gi|15291839|gb|AAK93188.1| LD29280p [Drosophila melanogaster] gi|23171948|gb|AAN13899.1| NADH:ubiquinone reductase 42kD subunit precursor, isoform B [Drosophila melanogaster] gi|220945916|gb|ACL85501.1| ND42-PA [synthetic construct] gi|220955674|gb|ACL90380.1| ND42-PA [synthetic construct] Length = 407 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 28/226 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54 I EG AGK+ L L + Y R + Sbjct: 85 ICVEGPIAAGKSKFAKELAEELDMEYYPAVDLDLIYINSYGYDMRKLDPQLPPSCRSYDV 144 Query: 55 ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 L D A+ + ++ R + ++ L G+ ++ +R S + + Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHVLSTGQGVVLERSPYSDFVFMEAMF 202 Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 QG + L++ ++ E+ P I LDLPVD K+++ R E + + Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + + +Q +L + I D + + V +I I Sbjct: 263 AYLSDLEQLYKQQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307 >gi|116326838|ref|YP_803376.1| thymidine kinase [Trichoplusia ni ascovirus 2c] gi|102231846|gb|ABF70669.1| thymidine kinase [Trichoplusia ni ascovirus 2c] Length = 219 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 64/184 (34%), Gaps = 29/184 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS EG G+GK+T I+ L + +T + G + L + F + Sbjct: 4 ISIEGNIGSGKSTIINKLVE--EYDGKVRGITEDVGNWNLLGP---MYLQPKIFAFPFQM 58 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLF------ 116 + ++ + H + N L + I++ +R SSY D + F Sbjct: 59 QVLISQYNTMKHIINNTTYETLNDDTIIVIERSPWSSYNVFVKMMVNDGILNKFEHDAYK 118 Query: 117 ------LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169 +DSL TI L D+ +KR+ R E Y E+ + Sbjct: 119 KFYHYIMDSLYSGVFN------TIYLKTSPDVCMKRISQRGRKEELNMSRTYIEKLN-NY 171 Query: 170 HEKR 173 HE Sbjct: 172 HEMV 175 >gi|300115340|ref|YP_003761915.1| hypothetical protein Nwat_2842 [Nitrosococcus watsonii C-113] gi|299541277|gb|ADJ29594.1| hypothetical protein Nwat_2842 [Nitrosococcus watsonii C-113] Length = 516 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 78/253 (30%), Gaps = 58/253 (22%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-----------RKNYDVHVTREPGGTPAAEAAR 51 G+ ++F G +G+GK++ ++L + + R P A + Sbjct: 279 GGVLVAFLGCDGSGKSSLAEDTAKWLSWKIDAMPVYLGSGDGPSSLLRWPMKVTLAALQK 338 Query: 52 HVLLSC-------GVDEFGAEAEAIVFAA--------ARLDHVENV-----IRPALMEGK 91 LL G D + +++ A +E I A +G Sbjct: 339 LGLLQKKQPAGTRGDDNRLSRGRSLLALVRPALKVPWALALALEKRGKLRRITKARNKGM 398 Query: 92 ILLCDRFLDSSYAYQGERDSSQHL---------FLDSLQEISVQEVM---PDCTIILDLP 139 I++CDR+ S G+ H L + + I Q+ PD I L + Sbjct: 399 IVVCDRYPQSQVMGFGDGPLLNHWRNHPWKIKRILAAWEAIPYQKAELYPPDLIIKLQVT 458 Query: 140 VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199 + L+R ++ +R K VD+ F Sbjct: 459 PETALQRKGEMDIEECKRRVEAVKRLQYPPFTKVAD---------------VDANQIFDD 503 Query: 200 VATNILNIVWELV 212 V + +WE V Sbjct: 504 VLLQVKRYIWEEV 516 >gi|172059735|ref|YP_001807387.1| deoxynucleoside kinase [Burkholderia ambifaria MC40-6] gi|171992252|gb|ACB63171.1| deoxynucleoside kinase [Burkholderia ambifaria MC40-6] Length = 228 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 49/164 (29%), Gaps = 20/164 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E A Sbjct: 18 RYLVIEGPIGVGKTTLARLLGERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123 + + FA R +I AL G+ ++ D + L I Sbjct: 71 Q---LSFALERAQQARELI-GALDTGRPVVAD---YMPQKNDIFARLNLPEDEWQLYRSI 123 Query: 124 SV-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + Q PD + L ++ R+Q R E D + Sbjct: 124 ATHLDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|78065317|ref|YP_368086.1| deoxynucleoside kinase [Burkholderia sp. 383] gi|77966062|gb|ABB07442.1| Deoxynucleoside kinase [Burkholderia sp. 383] Length = 228 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 26/167 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTTLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + + FA R +I AL G+ ++ D + Q ++ + ++ Sbjct: 71 Q---LSFALQRAQQARELI-GALETGRPVIAD------FMPQKNDIFARLNLPEDEWQLY 120 Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 Q PD + L ++ R+Q R E D + Sbjct: 121 RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|331674541|ref|ZP_08375301.1| conserved hypothetical protein [Escherichia coli TA280] gi|331068635|gb|EGI40030.1| conserved hypothetical protein [Escherichia coli TA280] Length = 230 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + F+ L ++ PD I L++ +++ R + Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACAR----KPDHKRE 181 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L+ + I + + +D+ + V + + + + R Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|115298542|ref|YP_762395.1| 24.5 kDa Thymidine kinase [Spodoptera frugiperda ascovirus 1a] gi|21668305|emb|CAC84464.1| thymidine kinase [Spodoptera frugiperda ascovirus 1a] gi|114416809|emb|CAL44640.1| 24.5 kDa Thymidine kinase [Spodoptera frugiperda ascovirus 1a] Length = 210 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 69/219 (31%), Gaps = 29/219 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+S EG G+GK++ + V+ EP + F E Sbjct: 8 FVSVEGNIGSGKSSVMRKAAERYDGL---VYFCEEPVEEWGLLMY--MYNDPARYAFPFE 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQ----------H 114 + + ++ + L G ++++ +R S AY + Sbjct: 63 LQVL---TSKYQKWLDSYETCLRTGARVVIMERSPWS--AYDVFTRMMRDRGSITDKQFD 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ D + + D + +D D +R Q R E DV E+ Sbjct: 118 VYTDVFRSLENDIPRIDHVVYIDTKPDTCHRRAQERGREAEK-------SLDVEYFERV- 169 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + + +++ + V + ++ +V+ Sbjct: 170 ECYTKRYVDNHSSVFVLNGNLPREDVLASFNRVLDGIVE 208 >gi|298368468|ref|ZP_06979786.1| deoxyguanosine kinase [Neisseria sp. oral taxon 014 str. F0314] gi|298282471|gb|EFI23958.1| deoxyguanosine kinase [Neisseria sp. oral taxon 014 str. F0314] Length = 212 Score = 57.3 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 19/174 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G+GK+ L + + H+T P P E L+ Sbjct: 4 RYIVVEGSIGSGKSELSRRLAKHFEAL----HLTESPERNPFLE---QFYLNASNHGLAT 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 E + F R ++V ++I +G ++ D FL D + +D Q LF + + Sbjct: 57 E---LFFLMRRAENV-DIINAEEDKGGRIIAD-FLLEKDQIFVPVVLKDPEQTLFWELRR 111 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR----ESACLDYFERKDVMIHE 171 +I Q +PD + L + KR+Q R S L +++ Sbjct: 112 KIMPQYPVPDLVVYLQTSGEADTKRLQRRGDGILSMFPSGYLGKIQQEYSRFFH 165 >gi|157878768|ref|XP_001687401.1| hypothetical protein [Leishmania major strain Friedlin] gi|321438060|emb|CBZ11812.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 274 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 29/178 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++G GKT L L T P T R G +E A A Sbjct: 70 IVVEGLDGTGKTLVTRTLAEKLSG---VAISTPPPQFTEIRNTFR------GQEEAVARA 120 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123 ++AA E ++ A + +++ DR+ S+ A ++ Sbjct: 121 ---FYSAANYIAAEGIL--AASQSSVVVVDRWWCSTCAMALANGCLYDSLPPSGAAVYRW 175 Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVMI 169 PD +L + + +R + ++ + R +++I Sbjct: 176 PEDLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSQREMRCVAMEAYRRTNMLI 233 >gi|146299479|ref|YP_001194070.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Flavobacterium johnsoniae UW101] gi|146153897|gb|ABQ04751.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Flavobacterium johnsoniae UW101] Length = 377 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 76/216 (35%), Gaps = 22/216 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+FEG GAGKTT + + K P F E Sbjct: 180 YIAFEGNIGAGKTTLVHKIAEDFNAKTVLERFADNPFLP-------KFYKDQNRYAFPLE 232 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124 F A R + + + + ++ D + S + L +L +I Sbjct: 233 MS---FLADRYQQLSDDLAQFDLFKDFIVADYHIFKSLIFAKITLQEDEYRLYRNLFDII 289 Query: 125 VQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +E PD I L D L+ ++ R E E + + K +L+ ++ Sbjct: 290 YKEMPKPDLYIYLYQNTDRLLQNIKKRGRTYEQN----IEAQYLD---KINNGYLEYIKS 342 Query: 184 QPD-RCHIVD-SAHSFQSVATNILNIVWELVQKRVS 217 Q D I+D S F + L ++ E +QK+++ Sbjct: 343 QKDLNVLIIDVSDRDFVKKQEDYLFVLNE-IQKKLN 377 >gi|242024050|ref|XP_002432443.1| NADH-Ubiquinone oxidoreductase 42KDa subunit [Pediculus humanus corporis] gi|212517876|gb|EEB19705.1| NADH-Ubiquinone oxidoreductase 42KDa subunit [Pediculus humanus corporis] Length = 360 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 50/169 (29%), Gaps = 25/169 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-------VLLSC 57 I EG GK+ L L K + + R ++ S Sbjct: 70 KIIVVEGPIACGKSAFAQELAEQLDMKYIPQPTMDDYYILYSGYDLRQHDDELPSIVRSF 129 Query: 58 GVDEF-----GAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 +F ++ I R + + L G+ ++ +R + AY Sbjct: 130 DHRKFCVNPTDPKSCIYQINMMFLRFFQYVDALAHLLNTGQGVILERSFYTYAAY----- 184 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 +D+ S P I LD+P+ + +R+ R E Sbjct: 185 ------MDANLYASTFFKKPHLIIYLDIPIPVVQERICTRNYSYEQNSP 227 >gi|149573007|ref|XP_001520130.1| PREDICTED: similar to thymidylate kinase family LPS-inducible member, partial [Ornithorhynchus anatinus] Length = 223 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 75/222 (33%), Gaps = 40/222 (18%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I EG++ GKTT + L V + P P + R V Sbjct: 23 QKGPFPVIVIEGLDATGKTTVTRSVSESLNA----VLLKSPP---PCMDEWRKVF--DKE 73 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A ++ + R + ++ DR+ S+ A+ + S L L Sbjct: 74 PTIIKRA---FYSLGNYIVASEIARASTQSP--VIIDRYWHSTAAFAIATEVSGGLQNLP 128 Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDV 167 Q D L + ++R+Q R + ++ + Sbjct: 129 PAHHGVYQWPR-------DLLKPDLVLLLTLSSEERVRRIQGRGVEKTEEEMEL--EAND 179 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +K + + P C IVD++HS + V N+L+++ Sbjct: 180 LFRQKVEMSYQRM--ENPG-CQIVDASHSREKVLENVLHLIK 218 >gi|134294828|ref|YP_001118563.1| deoxynucleoside kinase [Burkholderia vietnamiensis G4] gi|134137985|gb|ABO53728.1| deoxynucleoside kinase [Burkholderia vietnamiensis G4] Length = 228 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E A Sbjct: 18 RYLVIEGPIGVGKTTLARLLAERWSMQ----ALLERPQDNPFLE---RFYRDTARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + + FA R ++ AL G+ ++ D + Q ++ + ++ Sbjct: 71 Q---LAFALQRAQQARELL-GALDTGRPVVAD------FMPQKNDIFARLNLPEDEWQLY 120 Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 Q PD + L ++ R+Q R E D + Sbjct: 121 RAIAAHVDVPQAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|156399321|ref|XP_001638450.1| predicted protein [Nematostella vectensis] gi|156225571|gb|EDO46387.1| predicted protein [Nematostella vectensis] Length = 242 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 75/217 (34%), Gaps = 44/217 (20%) Query: 7 ISFEGIEGAGKTTHISL-----LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++ EG G+GKTT + + L+ V + GG+ + L+ Sbjct: 30 VAIEGNIGSGKTTLLKYFRQNPIVEILEE---PVKKWQNVGGSNILD-----LMYKDPKR 81 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFLDSL 120 + E+ V + H P + L +R S AY ++ ++ + S+ Sbjct: 82 WSYMFESYVLLSMMKLHHNTQKAP------VRLLERSAYS--AYFCFIENLHRNGLVTSV 133 Query: 121 Q--------EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + E +++ P D I L + +KRV+ R ES + + Sbjct: 134 EYSIFQEWFEFLLEQQKPQLDLIIYLRTSPENCMKRVKMRSRSEESTV-------SMDLI 186 Query: 171 EKRRQIFLD-IARNQ----PDRCHIVDSAHSFQSVAT 202 + + + D + R P +VD S + Sbjct: 187 QNLHERYEDWLIRKTKFHVPAPVVVVDGNQSLAELFE 223 >gi|260447972|gb|ACX38394.1| conserved hypothetical protein [Escherichia coli DH1] gi|315137583|dbj|BAJ44742.1| hypothetical protein ECDH1ME8569_2886 [Escherichia coli DH1] Length = 230 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQTGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|306816671|ref|ZP_07450803.1| hypothetical protein ECNC101_08634 [Escherichia coli NC101] gi|305850236|gb|EFM50695.1| hypothetical protein ECNC101_08634 [Escherichia coli NC101] Length = 230 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + ++ + +D+ + V + + + + R Sbjct: 186 KIAI-----TPLLTF-----GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|300973440|ref|ZP_07172196.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300410782|gb|EFJ94320.1| conserved hypothetical protein [Escherichia coli MS 45-1] Length = 230 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 46/238 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG- 107 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 108 -----ERDSSQHLFLDSLQEISVQEV---MPDCTIILDLPVDIGLKRV--QNRYSLRESA 157 +L S + + + PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHGMASHKPDLVIKLNVDLEVACARKPDHKRESLARKI 187 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 188 AI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|323173769|gb|EFZ59398.1| hypothetical protein ECLT68_2087 [Escherichia coli LT-68] Length = 230 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 72/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAAR 51 I+ G +G+GK+T L +++ VH+ ++ G G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 52 HVLLSCGVDEFGAEAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 + G ++ A AR + G I+L DR+ AY G Sbjct: 68 RNQMKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|25144561|ref|NP_741215.1| NADH Ubiquinone Oxidoreductase family member (nuo-4) [Caenorhabditis elegans] gi|687841|gb|AAA62532.1| Hypothetical protein K04G7.4a [Caenorhabditis elegans] Length = 436 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 75/230 (32%), Gaps = 34/230 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGG---TPAAEAARHVLL 55 I EG G+GKTT L L + + D+ V R AR+ L Sbjct: 73 KLIVVEGNIGSGKTTLAKQLADQLGFVHFPEFRMDDILVDRYGNDLRNYYNKFPARYRLP 132 Query: 56 SCGVDEFGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + E R+ D N + L G+ ++ +R S + + Sbjct: 133 DISMFYKNPSGELSAAMQDRIFNCRFDQYLNALAHILNTGQGVVLERTPHSDFVFANAMR 192 Query: 111 SSQHL---------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 ++ F+ + P + L+ P + L+ ++ R + E A +D Sbjct: 193 DKNYIGHEYFKHYYFVRK-NALPQLHFWPHLVVYLNTPTNKCLENIKRRGNTDEIATVD- 250 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAHS--FQSVATNILNI 207 ER + + + D R + I+ D +V +I + Sbjct: 251 -ER----YLKTIEESYKDSLREYRNHSKILAYDWTKPGDTDAVVEDIERL 295 >gi|300718285|ref|YP_003743088.1| Conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299064121|emb|CAX61241.1| Conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 252 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 78/240 (32%), Gaps = 54/240 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHV---------- 53 I+ G +G GK+T + L R LQ++ V R G + + + Sbjct: 27 LIAVVGSDGTGKSTLTADLVRNLQKQ--RVTERRYLGLISGEDGDKIKRLPVIGVWLERR 84 Query: 54 --LLSCGVDEFGAEAEAIV-------FAAARLDHVENVIRPALMEGKILLCDRF---LDS 101 S + A+ F+ R +++ IR A G +++ DR+ S Sbjct: 85 LAAKSDKTQRMSNKPPALWAALIMYGFSLWRSSNLQKAIRLA-QSGVLVISDRYPQAEIS 143 Query: 102 SYAYQGERDSSQHLFLDSLQEIS---------VQEVMPDCTIILDLPVDIGLKRVQNRYS 152 + Y G + + ++ + + P + LD+ VD R Sbjct: 144 GFYYDGPGIGVERAKGWLMSRLAESERRLYQQMALIRPQLILRLDIDVDTAYAR------ 197 Query: 153 LRESACLDY-FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D+ +E + I R + R +D+ + V L+ + + Sbjct: 198 -----KPDHSYEELEDKISAMVRIQY------NGSRIIELDARAPYDEVLAKALDSITAV 246 >gi|218696695|ref|YP_002404362.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli 55989] gi|260857126|ref|YP_003231017.1| hypothetical protein ECO26_4094 [Escherichia coli O26:H11 str. 11368] gi|260869748|ref|YP_003236150.1| hypothetical protein ECO111_3815 [Escherichia coli O111:H- str. 11128] gi|218353427|emb|CAU99497.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli 55989] gi|257755775|dbj|BAI27277.1| conserved hypothetical protein [Escherichia coli O26:H11 str. 11368] gi|257766104|dbj|BAI37599.1| conserved hypothetical protein [Escherichia coli O111:H- str. 11128] Length = 230 Score = 57.0 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAIMDFMTAR 227 >gi|320661741|gb|EFX29149.1| putative protein with nucleoside triphosphate hydrolase domain [Escherichia coli O55:H7 str. USDA 5905] Length = 230 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 74/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + ++ + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKVITDFMTAR 227 >gi|300916907|ref|ZP_07133610.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300415877|gb|EFJ99187.1| conserved hypothetical protein [Escherichia coli MS 115-1] Length = 230 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 75/241 (31%), Gaps = 52/241 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAAR 51 I+ G +G+GK+T L +++ VH+ ++ G G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 52 HVLLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG 107 + G ++ F A RL N++ G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRNML-ACRRRGLIVLTDRYPQDQIPGAYDG 126 Query: 108 ER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLR 154 + F+ L ++ PD I L++ +++ R R SL Sbjct: 127 TVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLA 184 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + +D+ + V + + + + Sbjct: 185 RKIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTA 226 Query: 215 R 215 R Sbjct: 227 R 227 >gi|206561605|ref|YP_002232370.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia cenocepacia J2315] gi|198037647|emb|CAR53590.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia cenocepacia J2315] Length = 228 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 51/167 (30%), Gaps = 26/167 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTTLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + + FA R +I AL G+ ++ D + Q ++ + ++ Sbjct: 71 Q---LSFALQRAQQARELI-GALDTGRPVIAD------FMPQKNDIFARLNLPEDEWQLY 120 Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 Q PD + L ++ R+Q R E D + Sbjct: 121 RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|22297644|ref|NP_680891.1| adenylate kinase [Thermosynechococcus elongatus BP-1] gi|29427444|sp|Q8DML4|KAD_THEEB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|22293821|dbj|BAC07653.1| adenylate kinase [Thermosynechococcus elongatus BP-1] Length = 195 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 73/226 (32%), Gaps = 54/226 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I F G G+GK T ++L L T G AE A LL + Sbjct: 2 RLILF-GGPGSGKGTQAAILTTLL---GIPHIST---GDILRAERAAGTLLGQQAQSYMD 54 Query: 65 EAEAIV------FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + A RL +P G +L + G + + L Sbjct: 55 RGELVPDQVIVDMVANRLQ------QPDTAAG-------WLLDGFPRNGAQAAVFEEMLK 101 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----------LDY---FERK 165 S+ + D + LD+P I +R NR + L +ER+ Sbjct: 102 SIHQDY------DYLLFLDVPAAILQERALNRAKQAVNGQQRSDDTPETILKRLQVYERE 155 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + ++ ++ + P + +D + + V I + E+ Sbjct: 156 TLPMIQQ----YM----SHP-KFVPIDGTRTIEEVTAAIQARIGEV 192 >gi|17738037|ref|NP_524399.1| deoxyribonucleoside kinase [Drosophila melanogaster] gi|20454871|sp|Q9XZT6|DNK_DROME RecName: Full=Deoxynucleoside kinase; AltName: Full=Deoxyribonucleoside kinase; Short=Dm-dNK; AltName: Full=Multispecific deoxynucleoside kinase gi|31615910|pdb|1OT3|A Chain A, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|31615911|pdb|1OT3|B Chain B, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|31615912|pdb|1OT3|C Chain C, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|31615913|pdb|1OT3|D Chain D, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|31615914|pdb|1OT3|E Chain E, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|31615915|pdb|1OT3|F Chain F, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|31615916|pdb|1OT3|G Chain G, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|31615917|pdb|1OT3|H Chain H, Crystal Structure Of Drosophila Deoxyribonucleotide Kinase Complexed With The Substrate Deoxythymidine gi|186972823|pdb|2VP0|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972824|pdb|2VP0|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|5924308|gb|AAD56545.1|AF185268_1 deoxyribonucleoside kinase [Drosophila melanogaster] gi|7025919|gb|AAD47355.2|AF045610_1 deoxyribonucleoside kinase [Drosophila melanogaster] gi|4741228|emb|CAB41881.1| deoxynucleoside kinase [Drosophila melanogaster] gi|7300459|gb|AAF55615.1| deoxyribonucleoside kinase [Drosophila melanogaster] gi|20976886|gb|AAM27518.1| LD27103p [Drosophila melanogaster] gi|220950078|gb|ACL87582.1| dnk-PA [synthetic construct] gi|220959178|gb|ACL92132.1| dnk-PA [synthetic construct] Length = 250 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT+++ ++ D+ + EP ++L + + A Sbjct: 25 IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P K+ + +R + S+ Y + S + ++L+E Sbjct: 78 MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V D I L ++ +R++ R ES + ++ +HE Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190 Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200 I + +P C ++D+ + +++ Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214 >gi|16130886|ref|NP_417460.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|89109761|ref|AP_003541.1| hypothetical protein with nucleoside triphosphate hydrolase domain [Escherichia coli str. K-12 substr. W3110] gi|157158978|ref|YP_001464450.1| hypothetical protein EcE24377A_3453 [Escherichia coli E24377A] gi|170018755|ref|YP_001723709.1| hypothetical protein EcolC_0707 [Escherichia coli ATCC 8739] gi|170082534|ref|YP_001731854.1| nucleoside triphosphate hydrolase domain-containing protein [Escherichia coli str. K-12 substr. DH10B] gi|194436674|ref|ZP_03068774.1| conserved hypothetical protein [Escherichia coli 101-1] gi|238902104|ref|YP_002927900.1| hypothetical protein BWG_2704 [Escherichia coli BW2952] gi|253772175|ref|YP_003035006.1| hypothetical protein ECBD_0752 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162940|ref|YP_003046048.1| hypothetical protein ECB_02862 [Escherichia coli B str. REL606] gi|256019090|ref|ZP_05432955.1| predicted protein with nucleoside triphosphate hydrolase domain [Shigella sp. D9] gi|297517095|ref|ZP_06935481.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli OP50] gi|300905887|ref|ZP_07123620.1| hypothetical protein HMPREF9536_03879 [Escherichia coli MS 84-1] gi|300923643|ref|ZP_07139671.1| hypothetical protein HMPREF9548_01836 [Escherichia coli MS 182-1] gi|300950810|ref|ZP_07164696.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958367|ref|ZP_07170508.1| hypothetical protein HMPREF9547_04081 [Escherichia coli MS 175-1] gi|301304168|ref|ZP_07210284.1| hypothetical protein HMPREF9347_02768 [Escherichia coli MS 124-1] gi|301643648|ref|ZP_07243689.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|307139676|ref|ZP_07499032.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli H736] gi|312972752|ref|ZP_07786925.1| uncharacterized ATP-binding protein yghT [Escherichia coli 1827-70] gi|331643687|ref|ZP_08344818.1| conserved hypothetical protein [Escherichia coli H736] gi|2833410|sp|Q46844|YGHT_ECOLI RecName: Full=Uncharacterized ATP-binding protein yghT gi|882515|gb|AAA69153.1| ORF_o230 [Escherichia coli str. K-12 substr. MG1655] gi|1789359|gb|AAC76022.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|85675794|dbj|BAE77047.1| hypothetical protein with nucleoside triphosphate hydrolase domain [Escherichia coli str. K12 substr. W3110] gi|157081008|gb|ABV20716.1| conserved hypothetical protein [Escherichia coli E24377A] gi|169753683|gb|ACA76382.1| conserved hypothetical protein [Escherichia coli ATCC 8739] gi|169890369|gb|ACB04076.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli str. K-12 substr. DH10B] gi|194424156|gb|EDX40143.1| conserved hypothetical protein [Escherichia coli 101-1] gi|238863055|gb|ACR65053.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli BW2952] gi|242378542|emb|CAQ33328.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli BL21(DE3)] gi|253323219|gb|ACT27821.1| conserved hypothetical protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974841|gb|ACT40512.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli B str. REL606] gi|253978996|gb|ACT44666.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli BL21(DE3)] gi|284923013|emb|CBG36105.1| conserved hypothetical protein [Escherichia coli 042] gi|300314951|gb|EFJ64735.1| hypothetical protein HMPREF9547_04081 [Escherichia coli MS 175-1] gi|300402356|gb|EFJ85894.1| hypothetical protein HMPREF9536_03879 [Escherichia coli MS 84-1] gi|300420084|gb|EFK03395.1| hypothetical protein HMPREF9548_01836 [Escherichia coli MS 182-1] gi|300449905|gb|EFK13525.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300840581|gb|EFK68341.1| hypothetical protein HMPREF9347_02768 [Escherichia coli MS 124-1] gi|301078032|gb|EFK92838.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|309703422|emb|CBJ02761.1| conserved hypothetical protein [Escherichia coli ETEC H10407] gi|310332694|gb|EFP99907.1| uncharacterized ATP-binding protein yghT [Escherichia coli 1827-70] gi|315256885|gb|EFU36853.1| conserved hypothetical protein [Escherichia coli MS 85-1] gi|315614988|gb|EFU95626.1| uncharacterized ATP-binding protein yghT [Escherichia coli 3431] gi|323936009|gb|EGB32304.1| yghT protein [Escherichia coli E1520] gi|323941912|gb|EGB38091.1| gyghT [Escherichia coli E482] gi|323960963|gb|EGB56582.1| gyghT [Escherichia coli H489] gi|331037158|gb|EGI09382.1| conserved hypothetical protein [Escherichia coli H736] gi|332102545|gb|EGJ05891.1| conserved hypothetical protein [Shigella sp. D9] Length = 230 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|194911336|ref|XP_001982332.1| GG11101 [Drosophila erecta] gi|190656970|gb|EDV54202.1| GG11101 [Drosophila erecta] Length = 407 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 44/229 (19%), Positives = 76/229 (33%), Gaps = 34/229 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------------ 54 I EG AGK+ L L + Y R + Sbjct: 85 ICVEGPIAAGKSKFAKELAEELDMQYYPAVDLDLIYINSYGYDLRKLDPQLPPSCRSYDV 144 Query: 55 ----LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 L D A+ + ++ R + ++ L G+ ++ +R S + + Sbjct: 145 RNFCLDPSHD-LAAQFQIRMYML-RYSQYIDALQHILSTGQGVVLERSPYSDFVFMEAMF 202 Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACL---D 160 QG + L++ ++ E+ P I LDLPVD K+++ R E D Sbjct: 203 RQGYLSRGARSVYNELRQNTIGELLKPHLVIYLDLPVDAVKKQIKARNVDYEVQSKVFSD 262 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + DV + K Q +L + I D + + V +I I Sbjct: 263 AYLS-DVELLYK--QQYLKDISTHAE-LLIYDWTAGGETEVVVEDIERI 307 >gi|71411155|ref|XP_807839.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70871923|gb|EAN85988.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 261 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 29/181 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N I EGI+G GK+ L L + R P L+ + Sbjct: 49 NQKTLIVLEGIDGVGKSLVAQSLIERL---GDSAVLIRTPHPD----------LNGIRET 95 Query: 62 FGAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117 F A+ E A F +A A E K+++ DR+ S+ A Sbjct: 96 FRAQTEETARAFYSAANYLAAWDAFHATKERKVVVFDRWWCSTCAMALANSCRLTALPAA 155 Query: 118 -DSLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 D++ + +P + +L + I R++ R E + + ++ R Sbjct: 156 GDAVYQWPQD--LPPFQLGALLYVEEHIRQARIRQRAPEDA-------EERRLSAQQEMR 206 Query: 175 Q 175 + Sbjct: 207 E 207 >gi|255021399|ref|ZP_05293447.1| deoxynucleoside kinase family protein [Acidithiobacillus caldus ATCC 51756] gi|254969262|gb|EET26776.1| deoxynucleoside kinase family protein [Acidithiobacillus caldus ATCC 51756] Length = 202 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 43/231 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I EG GAGKT+ LL + + R + RH Sbjct: 1 MKAARLIVVEGPMGAGKTSLTRLLAAAMA---IPAVLERPADNPFLGDFYRH-------- 49 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHL 115 + A + F R L ++ + D + + + E Sbjct: 50 QQHVLATELYFLMQR-----RKTWDGLEGDRLYVADHGPEKDRIFTPLTLEAETLRLFRE 104 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +L + + I LD PVD+ L+R++ R E+ + + Sbjct: 105 IRAALSYNAPRVP---LLIYLDSPVDVLLERIRARQDPWEA-------SMQRAYVLRVQD 154 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNIL------NIVWELVQKRVSPLS 220 + R+ P ++D +VA + + I+ E+V+ +++ L Sbjct: 155 AYRQWLRHYPG--QVLD----LSTVAGDFVADSEHAKILTEMVKNKITELG 199 >gi|145528967|ref|XP_001450272.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417883|emb|CAK82875.1| unnamed protein product [Paramecium tetraurelia] Length = 232 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 25/211 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDEFG 63 IS EG G+GK+T + L +Q+K D+ EP LL ++ Sbjct: 8 LISIEGNIGSGKSTLLKL----MQQKYPDLRFIPEPVNEWQCINGDPSLNLLGSFYEDST 63 Query: 64 AEAEAIVFAAA--RLDHVENVIRPAL--MEGKILLCDRFLDS---SYAYQGERDS----- 111 A + A RL H + V+ + E ++L +R +++ +A G ++ Sbjct: 64 RWAYTMQVYAFYSRLKHWKEVLSDPINPEERHLILSERSIEADKEIFAVNGHKNGLINKL 123 Query: 112 ---SQHLFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 F D L +E+ +++ I L + ++ +R+Q R E ++ + Sbjct: 124 EFALYEKFYDWLCEEVFGKKIQKQMIIYLQVDPEVCHQRMQKRARDEEKNT---ISKEYL 180 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ 198 R + +L ++ +++ F+ Sbjct: 181 TQIHNRHEEWLLRETHKNTSILVLNGDQEFE 211 >gi|262155793|ref|ZP_06028916.1| putative deoxyribonucleoside kinase [Vibrio cholerae INDRE 91/1] gi|262030384|gb|EEY49025.1| putative deoxyribonucleoside kinase [Vibrio cholerae INDRE 91/1] Length = 195 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 16/156 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GK+T + L L ++ E LL + E Sbjct: 3 YITLEGNVGVGKSTLLHRLADEL---GWEAV--EEGIEFDEGF---QTLLKERYENPTPE 54 Query: 66 --AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+ ++ A + I AL K + +R + ++ + ++ +D+L Sbjct: 55 NVAKLQLYVANF---MAERIN-ALDPKKFYVVERSVFATELFSLAA--NRPDIIDALAGH 108 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 ++ P+ + L P + L+R++ R E + Sbjct: 109 VLRVPAPEFYLYLSAPPRLCLERIRERDRTGEGEGI 144 >gi|134095808|ref|YP_001100883.1| deoxynucleoside kinase [Herminiimonas arsenicoxydans] gi|133739711|emb|CAL62762.1| Deoxynucleoside kinase [Herminiimonas arsenicoxydans] Length = 213 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 15/156 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG GAGKTT L + + P P E G Sbjct: 7 KYVVVEGAIGAGKTTLAGKLAAQFGAQ----TLLERPEENPFLEKFYR---DAGRYALPT 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + F RL+ + ++ +P L + +I+ L D D +A D L+ Sbjct: 60 Q---MFFLFQRLNQLRDLAQPDLFDARIVSDFLLD--KDPIFARLTLGDDELALYQQLYD 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + Q +PD I L + R++ R E+ Sbjct: 115 HLRPQAPLPDLVIYLQAEPQTLIDRIKKRGIPMEAG 150 >gi|324005423|gb|EGB74642.1| hypothetical protein HMPREF9532_04933 [Escherichia coli MS 57-2] Length = 230 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 76/240 (31%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL---LSCGVD 60 I+ G +G+GK+T L +++ VH+ ++ G A ++ L ++ Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVSRAVTKLPLMGKSLHKTIE 67 Query: 61 EFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 + A+V A AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|119899433|ref|YP_934646.1| putative deoxyguanosine kinase [Azoarcus sp. BH72] gi|119671846|emb|CAL95760.1| putative deoxyguanosine kinase [Azoarcus sp. BH72] Length = 213 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 60/184 (32%), Gaps = 25/184 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ +I EG GAGKT+ L L + +P P G D Sbjct: 2 LDKARYIVVEGPIGAGKTSLARRLAARLPAD----TLFEQPETNPFLGRFYQ-----GSD 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--- 117 + + F R D + EG+ ++ D LD + + L L Sbjct: 53 RWALATQLS-FLFQRFDQLAAHAADQ-AEGRRVVSDFVLDKDPLFAALNLADDELALYHR 110 Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 D+++ + +PD I L + +RV+ R E + E+ + Sbjct: 111 IFDAMKPPA--PPVPDLVIYLQAKPETLAERVRKRGMDAERRITE-------AYLERVAE 161 Query: 176 IFLD 179 + Sbjct: 162 RYAR 165 >gi|330877891|gb|EGH12040.1| thymidylate kinase [Pseudomonas syringae pv. glycinea str. race 4] Length = 36 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 21/33 (63%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 +GLFI+ EG EGAGK+T+ L L+ + V Sbjct: 2 TGLFITLEGPEGAGKSTNREYLAAQLRAQGVKV 34 >gi|195356990|ref|XP_002044905.1| GM13644 [Drosophila sechellia] gi|195569783|ref|XP_002102888.1| GD19261 [Drosophila simulans] gi|194123798|gb|EDW45841.1| GM13644 [Drosophila sechellia] gi|194198815|gb|EDX12391.1| GD19261 [Drosophila simulans] Length = 250 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT+++ ++ D+ + EP ++L + + A Sbjct: 25 IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P K+ + +R + S+ Y + S + ++L+E Sbjct: 78 MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V D I L ++ +R++ R ES + ++ +HE Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHED-----W 190 Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200 I + +P C ++D+ + +++ Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214 >gi|30248102|ref|NP_840172.1| deoxynucleoside kinase [Nitrosomonas europaea ATCC 19718] gi|30179987|emb|CAD83982.1| Deoxynucleoside kinase [Nitrosomonas europaea ATCC 19718] Length = 214 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 61/164 (37%), Gaps = 16/164 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG GAGKT+ + L + +P P E G Sbjct: 7 RYIVVEGPIGAGKTSLARNMATRLNYS----LMLEQPEANPFLEKFY------GDMSRHT 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + F R+ ++++ R + + ++ D FL D +A + L+ + Sbjct: 57 LSTQLFFLIQRMQQLQSMERENVFS-RSVISD-FLFEKDRLFADVTLSEPEHGLYRQIRE 114 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164 + + PD I L +I ++R++ R + E DY R Sbjct: 115 HMPLNAPRPDLVIYLQAAPEILIRRIRQRGNALEQRISEDYLRR 158 >gi|323168170|gb|EFZ53857.1| hypothetical protein SS53G_1651 [Shigella sonnei 53G] Length = 230 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPRPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|331648777|ref|ZP_08349865.1| conserved hypothetical protein [Escherichia coli M605] gi|330909045|gb|EGH37559.1| conserved protein YghT, with nucleoside triphosphate hydrolase domain [Escherichia coli AA86] gi|331042524|gb|EGI14666.1| conserved hypothetical protein [Escherichia coli M605] Length = 230 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPAPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + F+ L ++ PD I L++ +D+ R + Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACAR----KPDHKRE 181 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L+ + I + + +D+ + V + + + + R Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|307310379|ref|ZP_07590027.1| protein with nucleoside triphosphate hydrolase domain protein [Escherichia coli W] gi|306909274|gb|EFN39769.1| protein with nucleoside triphosphate hydrolase domain protein [Escherichia coli W] gi|315062305|gb|ADT76632.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli W] gi|323377110|gb|ADX49378.1| hypothetical protein EKO11_0727 [Escherichia coli KO11] gi|324119798|gb|EGC13678.1| gyghT [Escherichia coli E1167] Length = 230 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLIDAEKAITDFMTAR 227 >gi|258593050|emb|CBE69361.1| Deoxynucleoside kinase family protein [NC10 bacterium 'Dutch sediment'] Length = 218 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 24/179 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +I EG G GKT+ LL LQ P T R Sbjct: 7 KPRYIVVEGPIGVGKTSLAELLAERLQAGKLLEGPDENPFITQFYTDMRRYAFQTQ---- 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119 + F R + + + L + ++ D +L D +AY D+ L+ + Sbjct: 63 ------LYFLLNRFRQQQELAQFDLFKQSLV-SD-YLFVKDKIFAYLTLDDNELALY-ER 113 Query: 120 LQ-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 LQ + + V PD + L D+ ++R+Q+R E E+ E + Sbjct: 114 LQPLLETRVVKPDLVLYLQAGTDVLIRRIQSRARASERE----LEQ---SYLEDVNAAY 165 >gi|227887693|ref|ZP_04005498.1| protein with nucleoside triphosphate hydrolase domain protein [Escherichia coli 83972] gi|227835089|gb|EEJ45555.1| protein with nucleoside triphosphate hydrolase domain protein [Escherichia coli 83972] gi|307555081|gb|ADN47856.1| hypothetical ATP-binding protein YghT [Escherichia coli ABU 83972] Length = 230 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRSVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|119504370|ref|ZP_01626450.1| DNA polymerase III, epsilon subunit [marine gamma proteobacterium HTCC2080] gi|119459878|gb|EAW40973.1| DNA polymerase III, epsilon subunit [marine gamma proteobacterium HTCC2080] Length = 231 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 66/195 (33%), Gaps = 27/195 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---REPGGTPAAEAARHVLLSCGVDEF 62 +I+ EG G GKTT L NY V + P + + L Sbjct: 24 YIAVEGPIGVGKTTLARRLAEAF---NYQVLLEDAHENPFLDRFYQNRKEAAL------- 73 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDS 119 A + F R + ++ + + E + L D D +A L+ Sbjct: 74 ---ATQLFFLFQRSQKIADLRQTDIFEPVRVSDFLID--KDPLFARINLDPDEYSLYEKV 128 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 Q++++ +PD I L D L+R+ +R E +R+ + + F Sbjct: 129 FQQLTIDAPLPDLVIYLQASPDRLLERILSRGVSSERG----IDREYLEQINEVYSEFFL 184 Query: 180 IARNQPDRCHIVDSA 194 P IV++ Sbjct: 185 YYDAAP--LLIVNAN 197 >gi|222034709|emb|CAP77451.1| Uncharacterized ATP-binding protein yghT [Escherichia coli LF82] gi|312947547|gb|ADR28374.1| hypothetical protein NRG857_14820 [Escherichia coli O83:H1 str. NRG 857C] Length = 230 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMAAR 227 >gi|332169541|gb|AEE18796.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Krokinobacter diaphorus 4H-3-7-5] Length = 378 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 63/195 (32%), Gaps = 30/195 (15%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ +++ K P F E Sbjct: 183 YITIEGNIGAGKTSLATMISDEFNAKLILERFKDNPFLP-------KFYKDPDRFAFPLE 235 Query: 66 AEAIVFAAARLDHV------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F A R + ++ + + DR+ +A Q + L Sbjct: 236 MS---FLADRYQQLLDDLGQYDLFKDFMCADY----DRYKSLIFA-QVTLQEEEFLLYKR 287 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L E+ ++ PD + L + LK + R E + D EK Q +L Sbjct: 288 LHEMMYKDMPQPDLYVYLYQNTERLLKNINKRGRSYEKSI-------DPTYLEKINQGYL 340 Query: 179 DIARNQPD-RCHIVD 192 D + Q + I+D Sbjct: 341 DFIKTQHNLNVKIID 355 >gi|218674841|ref|ZP_03524510.1| hypothetical protein RetlG_27040 [Rhizobium etli GR56] Length = 177 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 64/209 (30%), Gaps = 47/209 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64 EG+ GAGKT + LQR+ Y V RE G EA + Sbjct: 8 IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYRGDPTTGEAVDE----PADESVTD 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + A H+ +V GK+ ++ DR S ++ + F+D Sbjct: 60 RS-----AWVHAHHLWDV-------GKVRTMIVDR--RSLISFFCGGSRNLPRFVDWF-- 103 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 D LD+ +D +R+ R + + + Sbjct: 104 --------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHAT----KE 146 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + P +D+ V IL+ E Sbjct: 147 DVPKHAQRIDATAPLAVVVNEILSKCGEA 175 >gi|82778245|ref|YP_404594.1| hypothetical protein SDY_3087 [Shigella dysenteriae Sd197] gi|81242393|gb|ABB63103.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 234 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 74/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ GI+G+GK+T L +++ VH+ T+ P G + Sbjct: 12 LIAVIGIDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 71 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 72 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 131 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 132 VFPPNVEGGRFVSWLASQQRKAFHWMASH--KPDLVIKLNVDLEVACMRKPDHKRQSLAR 189 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 190 KIAI----TPQLTF------GGAQLVD--------IDANRPLEQVLIDAEKAITDFMTAR 231 >gi|218706613|ref|YP_002414132.1| hypothetical protein ECUMN_3470 [Escherichia coli UMN026] gi|293406603|ref|ZP_06650529.1| predicted protein [Escherichia coli FVEC1412] gi|298382342|ref|ZP_06991939.1| ATP-binding protein yghT [Escherichia coli FVEC1302] gi|300900323|ref|ZP_07118502.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|218433710|emb|CAR14627.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli UMN026] gi|291426609|gb|EFE99641.1| predicted protein [Escherichia coli FVEC1412] gi|298277482|gb|EFI18998.1| ATP-binding protein yghT [Escherichia coli FVEC1302] gi|300356213|gb|EFJ72083.1| conserved hypothetical protein [Escherichia coli MS 198-1] Length = 230 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + F+ L ++ PD I L++ +D+ R + Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACAR----KPDHKRE 181 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L+ + I + + +D+ + V + + + + R Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|242016294|ref|XP_002428764.1| Deoxynucleoside kinase, putative [Pediculus humanus corporis] gi|212513449|gb|EEB16026.1| Deoxynucleoside kinase, putative [Pediculus humanus corporis] Length = 284 Score = 56.6 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 68/234 (29%), Gaps = 61/234 (26%) Query: 5 LFISF-----------EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 FI+F EG G GKTT ++ ++N + EP + Sbjct: 65 KFITFYSSDKPFTIIVEGNVGCGKTTFLNNF-----QRNSNFLTLYEPIEEWKNVKGIDL 119 Query: 54 --LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 L + + + VF H + +P + +R + S Sbjct: 120 MNLFYNDLKTWSFSFQTYVFLTMMKIHEKKTNKPFK------IMERSIYS-------GRY 166 Query: 112 SQHLFLDSLQEISVQEV----------------MPDCTIILDLPVDIGLKRVQNRYSLRE 155 L L I+ E+ D + L ++ +R+ R E Sbjct: 167 VFIENLYKLNLITQPELAVLDEWFQWLVSTNCAKVDLIVYLRTNPEVAYERILKRGRAGE 226 Query: 156 SACLDYFERKDVMIHEKRRQIFLD-IARNQPDRCHI-----VDSAHSFQSVATN 203 + K +++ + + + + + +D+ Q++ + Sbjct: 227 TL--------PFEYVTKIHELYENWLIKKKNNSFCHAPVWCIDANQDLQTIKND 272 >gi|297180958|gb|ADI17161.1| deoxynucleoside kinases [uncultured gamma proteobacterium HF0070_08D07] Length = 236 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 58/155 (37%), Gaps = 15/155 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKTT L ++ + EP + + Sbjct: 26 FIAIEGPIGVGKTTLAKRLAETFGKQ-----LLLEPSFENP--FLESFYANGSKFALPTQ 78 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + F R + + +P ++E +++ D FL D +A L+ + Sbjct: 79 ---LYFLLNRARQLAEIPQPGILEQQLV-SD-FLFEKDRLFAELTLNKEELKLYDEITLN 133 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 +S+ P+ + L P + L R+++R L E + Sbjct: 134 LSLNIPKPNLVVYLQAPTSVLLDRIRDRGMLVEKS 168 >gi|26346402|dbj|BAC36852.1| unnamed protein product [Mus musculus] Length = 227 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 41 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 79 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 185 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L+ + + + +D++ S V ++ I Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 222 >gi|255513638|gb|EET89903.1| thymidylate kinase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 218 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 27/223 (12%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 + EG +G+GK+T ++L + V + R L D A Sbjct: 5 AIEGCDGSGKSTISAMLSERMP--GSKVI--EQSKRVDFLPDLRDFLNGQAGDLILAR-- 58 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEISV 125 +++ N +G + R + S+ AY D+ + + +I Sbjct: 59 -LIYFLGTNQLSSNEAAENERKGIDTILVRSIYSTKAYHFAYDALYDGDANKSVINDIVA 117 Query: 126 QE----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V PD + L + + ++R+ R +++ S LD ++ K + F A Sbjct: 118 SAERSLVHPDIVVFLHVGKEERVRRIARREAVKNS-SLD-WDSKIMAF---IDSEFYKYA 172 Query: 182 RNQPDR-----CHIVDSAHSFQSVATNILNIVW----ELVQKR 215 +R I ++ + + I++ + +++R Sbjct: 173 AELRERGKAQVIEIDNTNLTPEETVDCIISKIALGKIRAIKRR 215 >gi|22164298|gb|AAM93654.1|AF483732_1 putative secreted NADH-ubiquinone oxireductase [Ixodes scapularis] Length = 409 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 34/234 (14%), Positives = 74/234 (31%), Gaps = 30/234 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 I EG G GKT L L K + + R + Sbjct: 79 KVIVLEGNIGVGKTALAKSLADELGMKYFGEPSFDQLYVDEYGFDLRSIDHLAPEACRTC 138 Query: 54 ---LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + ++ R + + + L G+ ++ R S + + Sbjct: 139 DIQKFYEDPHNVNVASMQMIMFQLRFERYLDALVHLLNTGEGVVLKRSPFSDFVFAETMH 198 Query: 111 SSQHLFLDSLQEISV-------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 ++ +L+ ++ + + P I LD P ++ L+R++ R E Sbjct: 199 KFGYISKLALKAYNLMKEAGLPELLRPHLVIYLDAPSNVLLQRIKERNIPYEVQSK-VLA 257 Query: 164 RKDVMIHEKRR-QIFLDIARNQPD----RCHIVDSAHSFQSVATNILNIVWELV 212 ++ + ++ Q +L R+ + + F+ V +I I +E + Sbjct: 258 KEYLDEIDRLYKQSYLRSIRDNSELLLYDWTTI---GEFELVVDDIERINFEAL 308 >gi|254455539|ref|ZP_05068968.1| adenylate kinase [Candidatus Pelagibacter sp. HTCC7211] gi|207082541|gb|EDZ59967.1| adenylate kinase [Candidatus Pelagibacter sp. HTCC7211] Length = 187 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 68/213 (31%), Gaps = 41/213 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEFGA 64 I G GAGK T L L + R + + Sbjct: 3 IILFGPPGAGKGTQSKYLVNKL-----------NNFQISTGDILRDEIKKNSDIGKQITN 51 Query: 65 EAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + +F + + + VE ++ + DRF+ Y R SQ LD L Sbjct: 52 DMNDGIFISDDIVNELVEKLVNDPQKK------DRFIFDGY----PRSLSQAKNLDDLLN 101 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF----- 177 S Q++ D L++ + +KR++ R L + D + KR + Sbjct: 102 NSNQKI--DHIFFLNVNKETIIKRIEKRKVLENRSDDD------MNTIIKRYDTYMETTK 153 Query: 178 --LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 LD P+ H +D + I N + Sbjct: 154 PVLDFYSKNPN-FHEIDGTQEIDEITRKIDNFI 185 >gi|291398950|ref|XP_002715160.1| PREDICTED: UMP-CMP kinase 1 [Oryctolagus cuniculus] Length = 225 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 39 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 76 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + EGKI+ L R +D + A +++ D+ Sbjct: 77 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 129 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 130 LQGWNKTMDGKADVSFVLFFDCNDEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 183 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 184 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 220 >gi|301019936|ref|ZP_07184071.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|299882034|gb|EFI90245.1| conserved hypothetical protein [Escherichia coli MS 196-1] Length = 230 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRSVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNIEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLIDAEKAITDFMTAR 227 >gi|17942828|pdb|1J90|A Chain A, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase gi|17942829|pdb|1J90|B Chain B, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase gi|38492608|pdb|1OE0|A Chain A, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase In Complex With Dttp gi|38492609|pdb|1OE0|B Chain B, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase In Complex With Dttp gi|38492610|pdb|1OE0|C Chain C, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase In Complex With Dttp gi|38492611|pdb|1OE0|D Chain D, Crystal Structure Of Drosophila Deoxyribonucleoside Kinase In Complex With Dttp gi|186972731|pdb|2JJ8|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972732|pdb|2JJ8|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972733|pdb|2JJ8|C Chain C, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972734|pdb|2JJ8|D Chain D, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972825|pdb|2VP2|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972826|pdb|2VP2|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972827|pdb|2VP4|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972828|pdb|2VP4|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972829|pdb|2VP4|C Chain C, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972830|pdb|2VP4|D Chain D, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972831|pdb|2VP5|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972832|pdb|2VP5|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972833|pdb|2VP6|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972834|pdb|2VP6|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972835|pdb|2VP6|C Chain C, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972836|pdb|2VP6|D Chain D, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972837|pdb|2VP6|E Chain E, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972838|pdb|2VP6|F Chain F, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972839|pdb|2VP6|G Chain G, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972840|pdb|2VP6|H Chain H, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972841|pdb|2VP9|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972842|pdb|2VP9|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972843|pdb|2VP9|C Chain C, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972844|pdb|2VP9|D Chain D, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972845|pdb|2VP9|E Chain E, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972846|pdb|2VP9|F Chain F, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972847|pdb|2VP9|G Chain G, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972848|pdb|2VP9|H Chain H, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972895|pdb|2VQS|A Chain A, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972896|pdb|2VQS|B Chain B, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972897|pdb|2VQS|C Chain C, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|186972898|pdb|2VQS|D Chain D, Structural Studies Of Nucleoside Analog And Feedback Inhibitor Binding To Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase gi|225733912|pdb|2VPP|A Chain A, Drosophila Melanogaster Deoxyribonucleoside Kinase Successfully Activates Gemcitabine In Transduced Cancer Cell Lines gi|225733913|pdb|2VPP|B Chain B, Drosophila Melanogaster Deoxyribonucleoside Kinase Successfully Activates Gemcitabine In Transduced Cancer Cell Lines Length = 230 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT+++ ++ D+ + EP ++L + + A Sbjct: 25 IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P K+ + +R + S+ Y + S + ++L+E Sbjct: 78 MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V D I L ++ +R++ R ES + ++ +HE Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190 Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200 I + +P C ++D+ + +++ Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214 >gi|40062620|gb|AAR37549.1| deoxyguanosine kinase, putative [uncultured marine bacterium 311] Length = 229 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 65/203 (32%), Gaps = 29/203 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F++ EG G GKTT LL + + +P P + A Sbjct: 16 KFLAVEGPIGVGKTTLTKLLAESFRYE----TFLEQPSENPF---LADFYKNPSQ---SA 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A + F R+ ++++ + + + L D D +A + + + + Sbjct: 66 LATQLFFLFQRVKQIQDLKQGDIFTPIHVSDFLLD--KDKLFA-KVTLSEHELSLYNQIY 122 Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHEK---- 172 + +S+ PD I L KRV R E LD Sbjct: 123 DYLSLDLPTPDLVIYLQAETKTLFKRVIQREREIEKNISFEYLDLLNESYKEFFLNYDRS 182 Query: 173 ----RRQIFLDIARNQPDRCHIV 191 FLD+A NQ D ++ Sbjct: 183 PVLIVNSEFLDLAHNQNDYILLL 205 >gi|320645360|gb|EFX14369.1| putative protein with nucleoside triphosphate hydrolase domain [Escherichia coli O157:H- str. 493-89] gi|320650673|gb|EFX19130.1| putative protein with nucleoside triphosphate hydrolase domain [Escherichia coli O157:H- str. H 2687] gi|320656368|gb|EFX24275.1| putative protein with nucleoside triphosphate hydrolase domain [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320666892|gb|EFX33868.1| putative protein with nucleoside triphosphate hydrolase domain [Escherichia coli O157:H7 str. LSU-61] Length = 230 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|17389257|gb|AAH17684.1| Cytidine monophosphate (UMP-CMP) kinase 1 [Mus musculus] Length = 227 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 41 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 79 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 185 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L+ + + + +D++ S V ++ I Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 222 >gi|119953035|ref|YP_945244.1| deoxyguanosine kinase [Borrelia turicatae 91E135] gi|119861806|gb|AAX17574.1| deoxyguanosine kinase [Borrelia turicatae 91E135] Length = 205 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 58/172 (33%), Gaps = 23/172 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +GL I EG+ G GKTT +L + ++ E Sbjct: 1 MEAGLVIVIEGLIGVGKTTLGHVLSKEF-----NIPFYSELNNEFTLSMLDKFYKDKSR- 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQGERDSSQ------ 113 A + L+ +I+ +G + DR + + + S Sbjct: 55 ------WAFLVQINFLNERFKLIKSIFKTKGG--ILDRSIYGDRVFASLLNDSGYISNDE 106 Query: 114 -HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 ++LD L + P I LD VD +R++NR E+ +Y E Sbjct: 107 YKIYLDLLDNMLEHSQKPVLMIYLDCSVDEAERRIKNRNRSFETGIPREYLE 158 >gi|239637752|ref|ZP_04678719.1| deoxynucleoside kinase family protein [Staphylococcus warneri L37603] gi|239596654|gb|EEQ79184.1| deoxynucleoside kinase family protein [Staphylococcus warneri L37603] Length = 202 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 17/162 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L V P + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHKLSQSLDFYEEKEIVDENPFLSDFYDDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDS 119 ++ + E + F R +++ +L +G ++ D + + + DS + Sbjct: 51 KWSFQTE-MFFLCNRYKQFKDI--ESLHKG--IVSDYHIYKNKIFAKNTLDSHEFNKFSR 105 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + +I +++ MP+ I LD +D+ R+ R E D Sbjct: 106 IYDILTEDLTMPNTIIFLDAELDVLKHRIAKRNRSFEHQIED 147 >gi|319745776|gb|EFV98071.1| deoxynucleoside kinase [Streptococcus agalactiae ATCC 13813] Length = 213 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 55/237 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L + L DV +L + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117 A + F R I+ A +L DR + + Y+ + L + Sbjct: 49 YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103 Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L+E+ + + PD + +D+ D L+R+ R FE+ D H Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRS--------FEQVDS--H 153 Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSA-----HSFQSVATNILNIVWELVQK 214 + + + P+ +D + + + ++L+ + +QK Sbjct: 154 PELYDYYKQVHSEYPEWYENYDVSPKIRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209 >gi|114777133|ref|ZP_01452153.1| deoxynucleoside kinase [Mariprofundus ferrooxydans PV-1] gi|114552654|gb|EAU55114.1| deoxynucleoside kinase [Mariprofundus ferrooxydans PV-1] Length = 236 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 52/173 (30%), Gaps = 20/173 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKTT L L D + P E + + Sbjct: 32 ICIEGAIGVGKTTLARKLADKL---GSDTFF-EQVDDNPFIELFYQ---DPSRNALSVQL 84 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEISV 125 + + + + +G ++ D + + S + L L + + + Sbjct: 85 SFLFSRLKQWQSLHQ--QDLFRQG--VISDYLFAKDHIFATVTLSDEELALYEQVARLVS 140 Query: 126 QEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ PD I L + +KR+Q R E + EK + Sbjct: 141 VDIQRPDLVIYLQSKPSVIMKRIQQRNRAMERG-------MKMEYLEKVITAY 186 >gi|15805330|ref|NP_294022.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus radiodurans R1] gi|6457975|gb|AAF09883.1|AE001891_2 deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus radiodurans R1] Length = 205 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 15/154 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 +++ EG G GKT+ L + N +V P E F Sbjct: 1 MYVVVEGPIGVGKTSLAQRLAQRSGAELNLEVVE-ENPFLAKFYEQ-------PQAYAFQ 52 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQ- 121 +A ++ +R + + +P L + ++ D D + + L L Sbjct: 53 VQAFFLL---SRFKQLSQLWQPGLYRPE-VVSDYLFDKDFIFAAMNLRDAEFDLYQDLYG 108 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 +S + PD + L L+R+ R E Sbjct: 109 HLSPRLPTPDLVVYLRADPPELLRRIARRGRPFE 142 >gi|13508125|ref|NP_110074.1| deoxyguanosine kinase/ deoxyadenosine kinase [Mycoplasma pneumoniae M129] gi|2496356|sp|P75396|Y386_MYCPN RecName: Full=Uncharacterized protein MG268 homolog gi|1674139|gb|AAB96099.1| deoxyguanosine kinase/deoxyadenosine kinase [Mycoplasma pneumoniae M129] gi|301633462|gb|ADK87016.1| conserved hypothetical protein [Mycoplasma pneumoniae FH] Length = 229 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 77/219 (35%), Gaps = 31/219 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I+F GKTT L + L K V E + +LL+ + Sbjct: 21 GGM-IAF------GKTTIAESLAKHL--KGSKVIYELEEQ-----DQLADLLLAKMYERN 66 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL 120 A +F + N R + DR F D +A Q S + + L Sbjct: 67 DELLYAPLFQLYFTLNRFNKYRKECNNKTPTIFDRSIFEDWLFAKQNIHRPSIFTYYNHL 126 Query: 121 QE------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 I + P +IL+ ++ +R+ R E +D F K+ + Sbjct: 127 WNGIVKELIFKHGI-PALYVILEGDWELFEQRLFQRNRKVE---IDNF-AKNKDYFKNLY 181 Query: 175 QIFLDIARN----QPDRCHIVDSAHSFQSVATNILNIVW 209 +I+ + +N IV++ S +S+ +L ++ Sbjct: 182 KIYGEFIKNVCYDFGISHCIVNANQSVESITKQVLEVLK 220 >gi|67464020|pdb|1ZMX|A Chain A, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464021|pdb|1ZMX|B Chain B, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464022|pdb|1ZMX|G Chain G, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464023|pdb|1ZMX|H Chain H, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464024|pdb|1ZMX|E Chain E, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464025|pdb|1ZMX|F Chain F, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464026|pdb|1ZMX|C Chain C, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464027|pdb|1ZMX|D Chain D, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase N64d Mutant In Complex With Thymidine gi|67464401|pdb|1ZM7|A Chain A, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase Mutant N64d In Complex With Dttp gi|67464402|pdb|1ZM7|B Chain B, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase Mutant N64d In Complex With Dttp gi|67464403|pdb|1ZM7|C Chain C, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase Mutant N64d In Complex With Dttp gi|67464404|pdb|1ZM7|D Chain D, Crystal Structure Of D. Melanogaster Deoxyribonucleoside Kinase Mutant N64d In Complex With Dttp Length = 230 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 80/204 (39%), Gaps = 26/204 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT+++ ++ D+ + EP +L + + A Sbjct: 25 IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVDLL---ELMYKDPKKWA 77 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P K+ + +R + S+ Y + S + ++L+E Sbjct: 78 MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V D I L ++ +R++ R ES + ++ +HE Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190 Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200 I + +P C ++D+ + +++ Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214 >gi|165377065|ref|NP_079923.3| UMP-CMP kinase [Mus musculus] gi|12832572|dbj|BAB22163.1| unnamed protein product [Mus musculus] gi|74138708|dbj|BAE27170.1| unnamed protein product [Mus musculus] gi|74189516|dbj|BAE36771.1| unnamed protein product [Mus musculus] gi|74213836|dbj|BAE29352.1| unnamed protein product [Mus musculus] gi|123297837|emb|CAM19996.1| cytidylate kinase 1 [Mus musculus] gi|148698717|gb|EDL30664.1| mCG16168 [Mus musculus] Length = 227 Score = 56.2 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 41 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 79 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 185 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L+ + + + +D++ S V ++ I Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 222 >gi|196004192|ref|XP_002111963.1| hypothetical protein TRIADDRAFT_23783 [Trichoplax adhaerens] gi|190585862|gb|EDV25930.1| hypothetical protein TRIADDRAFT_23783 [Trichoplax adhaerens] Length = 188 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 70/188 (37%), Gaps = 36/188 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT+ I+ + Q T+EP ++ G+ + Sbjct: 1 ICIEGNIGCGKTSMINY---YSQMNGL--MATKEPVDKWRNLGDHNLF---GLFYEDPKR 52 Query: 67 EAIVF-------AAARLDHVENVIRPALMEGKILLCDRFLDS-SYAY------QGERDSS 112 + +F R HV ++ + A L +R + S +Y + + S Sbjct: 53 WSFLFQSYVMITMYQRHQHVASLAKNAY------LMERSVYSANYCFVENLRAEKLMSDS 106 Query: 113 QHLFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF-----ER 164 ++ L + + V P D + L +I +R++ R + E+ LDY Sbjct: 107 EYRVLQAYFDHFTDAVRPQIDMIVYLQCAPEICYERIKRRQRVEENRITLDYIRCLHQRH 166 Query: 165 KDVMIHEK 172 +D +IH K Sbjct: 167 EDWLIHRK 174 >gi|331684631|ref|ZP_08385223.1| conserved hypothetical protein [Escherichia coli H299] gi|320195136|gb|EFW69765.1| hypothetical protein EcoM_02901 [Escherichia coli WV_060327] gi|331078246|gb|EGI49452.1| conserved hypothetical protein [Escherichia coli H299] Length = 230 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 76/242 (31%), Gaps = 54/242 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHV-----LLSCG 58 I+ G +G+GK+T L +++ VH+ ++ G A + L Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGN--VGRAVTKLPLMGKSLHKT 65 Query: 59 VDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQ 106 +++ + A+V A AR + G I+L DR+ AY Sbjct: 66 IEKNEVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYD 125 Query: 107 GER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSL 153 G + F+ L ++ PD I L++ +++ R R SL Sbjct: 126 GTVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESL 183 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + + +D+ + V + + + + Sbjct: 184 ARKIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMT 225 Query: 214 KR 215 R Sbjct: 226 AR 227 >gi|26249554|ref|NP_755594.1| ATP-binding protein yghT [Escherichia coli CFT073] gi|91212400|ref|YP_542386.1| ATP-binding protein YghT [Escherichia coli UTI89] gi|117625292|ref|YP_854464.1| nucleoside triphosphate hydrolase domain-containing protein [Escherichia coli APEC O1] gi|191172551|ref|ZP_03034091.1| conserved hypothetical protein [Escherichia coli F11] gi|218560061|ref|YP_002392974.1| hypothetical protein ECS88_3368 [Escherichia coli S88] gi|218691277|ref|YP_002399489.1| hypothetical protein ECED1_3636 [Escherichia coli ED1a] gi|237706267|ref|ZP_04536748.1| nucleoside triphosphate hydrolase domain-containing protein [Escherichia sp. 3_2_53FAA] gi|300993125|ref|ZP_07180211.1| hypothetical protein HMPREF9553_04265 [Escherichia coli MS 200-1] gi|301048199|ref|ZP_07195235.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|331659268|ref|ZP_08360210.1| hypothetical ATP-binding protein YghT [Escherichia coli TA206] gi|26109962|gb|AAN82167.1|AE016766_255 Hypothetical ATP-binding protein yghT [Escherichia coli CFT073] gi|91073974|gb|ABE08855.1| hypothetical ATP-binding protein YghT [Escherichia coli UTI89] gi|115514416|gb|ABJ02491.1| putative protein with nucleoside triphosphate hydrolase domain [Escherichia coli APEC O1] gi|190907219|gb|EDV66818.1| conserved hypothetical protein [Escherichia coli F11] gi|218366830|emb|CAR04600.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli S88] gi|218428841|emb|CAR09642.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli ED1a] gi|226899307|gb|EEH85566.1| nucleoside triphosphate hydrolase domain-containing protein [Escherichia sp. 3_2_53FAA] gi|294493257|gb|ADE92013.1| conserved hypothetical protein [Escherichia coli IHE3034] gi|300299957|gb|EFJ56342.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300305140|gb|EFJ59660.1| hypothetical protein HMPREF9553_04265 [Escherichia coli MS 200-1] gi|307625410|gb|ADN69714.1| hypothetical protein UM146_01425 [Escherichia coli UM146] gi|315288781|gb|EFU48179.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|315291266|gb|EFU50626.1| conserved hypothetical protein [Escherichia coli MS 153-1] gi|315297637|gb|EFU56914.1| conserved hypothetical protein [Escherichia coli MS 16-3] gi|323951491|gb|EGB47366.1| yghT protein [Escherichia coli H252] gi|323957863|gb|EGB53577.1| yghT protein [Escherichia coli H263] gi|324011919|gb|EGB81138.1| hypothetical protein HMPREF9533_04077 [Escherichia coli MS 60-1] gi|331053850|gb|EGI25879.1| hypothetical ATP-binding protein YghT [Escherichia coli TA206] Length = 230 Score = 56.2 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|322372126|ref|ZP_08046667.1| adenylate kinase [Haladaptatus paucihalophilus DX253] gi|320548135|gb|EFW89808.1| adenylate kinase [Haladaptatus paucihalophilus DX253] Length = 205 Score = 55.8 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 73/239 (30%), Gaps = 65/239 (27%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN + I G GAGK T + + + + T +A R + Sbjct: 1 MNPNILIL--GAPGAGKGTQSARIAEEF---DVEHVTT--------GDALRAN-KHMETE 46 Query: 61 EFGAEAEAIVFAAARLDHV-----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + + V ++ AL E D ++ Y R+ SQ Sbjct: 47 HGTPAS-----FMDAGELVPDPVVNEIVNAALSE-----ADGYVLDGY----PRNLSQAE 92 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY 161 +LD + ++ D + LD+ D + R+ R E+ + + Sbjct: 93 YLDDITDL-------DVVLYLDVDEDELVGRLTGRRLDPETGDIYHIEYNPAEDEAVKER 145 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRC----------HIVDSAHSFQSVATNILNIVWE 210 ++D E R+ L + R + +D + V +I V E Sbjct: 146 LVQRDDDTEETVRER-LRVYRENTEPVIEHYEETGELVRIDGEQTPDEVWDDIKETVEE 203 >gi|302813858|ref|XP_002988614.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii] gi|300143721|gb|EFJ10410.1| hypothetical protein SELMODRAFT_427260 [Selaginella moellendorffii] Length = 399 Score = 55.8 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Query: 49 AARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 R +L E A I+F+ R + + + +++ DR+ S A+ Sbjct: 10 RLRCLLFLGRGAELDDRAVHILFSPNRWEKRLQMENKLMARTTLVV-DRYSYSGVAFSAA 68 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDI 142 + L L+ + V+ + D + LD+ + Sbjct: 69 KG----LDLEWCKAPEVELLAADLVLYLDISPEE 98 >gi|320156423|ref|YP_004188802.1| hypothetical protein VVM_03048 [Vibrio vulnificus MO6-24/O] gi|319931735|gb|ADV86599.1| hypothetical protein VVMO6_01577 [Vibrio vulnificus MO6-24/O] Length = 195 Score = 55.8 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 72/216 (33%), Gaps = 32/216 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GK+T + L L ++ E LL + E Sbjct: 3 YITLEGNVGVGKSTLLHRLADEL---GWEAV--EEGIEFDEGF---QTLLKERYENPTPE 54 Query: 66 --AEAIVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ ++ A + + L K + +R + ++ + ++ +D+L Sbjct: 55 NVAKLQLYVANFMAERINE-----LDPNKFYVVERSVFATELFSLAA--NRPDIIDALAG 107 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ P+ + L P + L+R+ R E + + + I Sbjct: 108 HVLRVPAPEFYLYLSAPPRLCLERIHERDRTGEGEGI------SLEYLQTLHDIHERWFN 161 Query: 183 NQP--DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R VD+ + + E V++RV Sbjct: 162 MMSMLGRVKRVDAVDYPD------VKRLAEAVRQRV 191 >gi|107021832|ref|YP_620159.1| deoxynucleoside kinase [Burkholderia cenocepacia AU 1054] gi|116688779|ref|YP_834402.1| deoxynucleoside kinase [Burkholderia cenocepacia HI2424] gi|105892021|gb|ABF75186.1| deoxynucleoside kinase [Burkholderia cenocepacia AU 1054] gi|116646868|gb|ABK07509.1| deoxynucleoside kinase [Burkholderia cenocepacia HI2424] Length = 228 Score = 55.8 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 50/163 (30%), Gaps = 18/163 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKT+ LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTSLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + FA R +I AL G+ ++ D + + L + I+ Sbjct: 71 Q---LSFALQRAQQARELI-GALETGRPVIADFMPQKNDIFARLNLPEDEWQLY--RSIA 124 Query: 125 V-----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 Q PD + L ++ R+Q R E D + Sbjct: 125 THVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|296207885|ref|XP_002750841.1| PREDICTED: UMP-CMP kinase-like [Callithrix jacchus] Length = 228 Score = 55.8 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNRTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 223 >gi|300931870|ref|ZP_07147167.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300460293|gb|EFK23786.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 230 Score = 55.8 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 72/237 (30%), Gaps = 50/237 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + + +D+ + V + + + + Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFM 224 >gi|319891527|ref|YP_004148402.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus pseudintermedius HKU10-03] gi|317161223|gb|ADV04766.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus pseudintermedius HKU10-03] Length = 207 Score = 55.8 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 19/163 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EG G GK++ L ++Y + +E E + Sbjct: 1 MKKP-FIAIEGPIGVGKSSLAHQL-----SQSYHFYEAKE----IVGENPYLSDFYSDIS 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118 ++ + E H + ++ D + + +A D+ F Sbjct: 51 KWSFQTEMFFLC-----HRYKDYQDLAEHTDGIVSDYHIYKNKIFARNTLNDTEYDKF-S 104 Query: 119 SLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + +I ++++ PD T+ILD + + +R+ R E+ D Sbjct: 105 RIYDILTEDLISPDFTVILDADLSVLKQRIAKRDRSFEANIQD 147 >gi|323465306|gb|ADX77459.1| deoxynucleoside kinase [Staphylococcus pseudintermedius ED99] Length = 207 Score = 55.8 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 19/163 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ EG G GK++ L ++Y + +E E + Sbjct: 1 MKKP-FIAIEGPIGVGKSSLAHQL-----SQSYHFYEAKE----IVGENPYLSDFYSDIS 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD 118 ++ + E H + ++ D + + +A D+ F Sbjct: 51 KWSFQTEMFFLC-----HRYKDYQDLAEHTDGIVSDYHIYKNKIFARNTLNDAEYDKF-S 104 Query: 119 SLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + +I ++++ PD T+ILD + + +R+ R E+ D Sbjct: 105 RIYDILTEDLISPDFTVILDADLSVLKQRIAKRDRSFEANIQD 147 >gi|293416431|ref|ZP_06659070.1| ATP-binding protein yghT [Escherichia coli B185] gi|291431787|gb|EFF04770.1| ATP-binding protein yghT [Escherichia coli B185] Length = 230 Score = 55.8 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 41/245 (16%), Positives = 77/245 (31%), Gaps = 60/245 (24%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL--------L 55 I+ G +G+GK+T L +++ VH+ G A R V+ L Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHL-----GKQAGNVGRAVVKLPLMGKSL 62 Query: 56 SCGVDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY-- 103 + ++ + A+V A AR + + G I+L DR+ Sbjct: 63 NKSIERNKVKTAKKLPGPVPALVITAFVARRLLRFRHMLASRRRGLIVLTDRYPQDQIPG 122 Query: 104 AYQGER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNR 150 AY G + F+ L ++ PD I L++ +++ R R Sbjct: 123 AYDGTVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACMRKPDHKR 180 Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 SL + + + +D+ + V + + E Sbjct: 181 ESLARKIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITE 222 Query: 211 LVQKR 215 + R Sbjct: 223 FMTAR 227 >gi|191167556|ref|ZP_03029368.1| conserved hypothetical protein [Escherichia coli B7A] gi|209920462|ref|YP_002294546.1| hypothetical protein ECSE_3271 [Escherichia coli SE11] gi|218555560|ref|YP_002388473.1| hypothetical protein ECIAI1_3135 [Escherichia coli IAI1] gi|293449335|ref|ZP_06663756.1| ATP-binding protein yghT [Escherichia coli B088] gi|300815532|ref|ZP_07095756.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|190902413|gb|EDV62150.1| conserved hypothetical protein [Escherichia coli B7A] gi|209913721|dbj|BAG78795.1| conserved hypothetical protein [Escherichia coli SE11] gi|218362328|emb|CAQ99950.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli IAI1] gi|291322425|gb|EFE61854.1| ATP-binding protein yghT [Escherichia coli B088] gi|300531461|gb|EFK52523.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|323183575|gb|EFZ68972.1| hypothetical protein ECOK1357_3355 [Escherichia coli 1357] gi|323946687|gb|EGB42708.1| yghT protein [Escherichia coli H120] gi|324018171|gb|EGB87390.1| hypothetical protein HMPREF9542_03226 [Escherichia coli MS 117-3] Length = 230 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANRPLEQVLVDAEKAITDFMTAR 227 >gi|194900074|ref|XP_001979582.1| GG23099 [Drosophila erecta] gi|190651285|gb|EDV48540.1| GG23099 [Drosophila erecta] Length = 250 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 80/204 (39%), Gaps = 26/204 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT+++ ++ D+ + EP ++L + + A Sbjct: 25 IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 77 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P K+ + +R + S+ Y + S + ++L+E Sbjct: 78 MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V D I L ++ +R++ R ES + ++ +HE Sbjct: 136 YKFIGESIHVQADLIIYLRTSPEVAHERIKQRARSEESCVPLKYLQELHELHED-----W 190 Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200 I +P C ++D+ + +++ Sbjct: 191 LIHHRRPQSCKVLVLDADLNLENI 214 >gi|76664774|emb|CAJ17825.1| thymidylate kinase [Candidatus Phytoplasma solani] Length = 56 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%) Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 ++ L E +I P+L++G I+L DR+ DS++AYQ + + Sbjct: 1 SPNTRFLLSLTNMLQTQEELIIPSLLKGYIVLIDRWYDSTFAYQSDDINLD 51 >gi|269114967|ref|YP_003302730.1| Deoxyguanosine kinase [Mycoplasma hominis] gi|268322592|emb|CAX37327.1| Deoxyguanosine kinase [Mycoplasma hominis ATCC 23114] Length = 219 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 85/220 (38%), Gaps = 14/220 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G+ AGK++ L R+ + + E + + G Sbjct: 1 MIIGVSGMIAAGKSSLAEKLHRYFE--GSLMLHEFEEDDEVFNTFLKWLYEGKPNLTIGF 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQ----GERDSSQHLFLD 118 ++ + + + + ++ + + ++ DRF Y + ++ D Sbjct: 59 QSYIVENHSTKFNKIKEEFEKSKKDPIEDMIFLDRFSIEHYIFAKLILSKKGKRYLDAYD 118 Query: 119 SL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV--MIHEKRRQ 175 +L +++ ++ +PD I LD+ + KR+ R E D E + +HE + Sbjct: 119 ALFEKLISKDELPDFAIFLDINFETFKKRIFTRGRQSEVDNWD--ENYEYFRNLHENYFK 176 Query: 176 IFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQK 214 IF +IA+ + ++D+ + + V L+I+ +K Sbjct: 177 IFKEIAQKFGLKYVVIDTNNLTEKEVFNKALDIIESEKEK 216 >gi|311895084|dbj|BAJ27492.1| hypothetical protein KSE_16670 [Kitasatospora setae KM-6054] Length = 211 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 69/216 (31%), Gaps = 24/216 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG++ GKTT L +L ++ V T G P + Sbjct: 4 IVVEGMDFTGKTTVCRHLAEYLDQQGTTVVRSTTSLTGGPIPALIEAAYRIPHLP--DPV 61 Query: 66 AEAIVFAAARLDHVENVIRP--ALMEGKIL-LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ A D P G+ + L + ++ +A+ R + L Sbjct: 62 RSALFHLAYLPDLAARPTPPGGHNPAGQQVWLQESYVCRVWAHDLARRQT------VLAR 115 Query: 123 ISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + P D ++L P ++ R R F D H + + Sbjct: 116 FAAR-LAPTLHRRVDLAVLLHSPHEVRHDR-YLRTGAPNLRDDRRF-GPDADHHRRVEEH 172 Query: 177 FLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211 +A+ H++ ++ A I ++ EL Sbjct: 173 LTRLAQGFG--YHLIGTSEQPPHESAAQIAALLAEL 206 >gi|311262320|ref|XP_003129123.1| PREDICTED: deoxycytidine kinase-like isoform 2 [Sus scrofa] Length = 232 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 86/223 (38%), Gaps = 34/223 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS EG AGK+T +++LK+ + ++V EP + + E+ Sbjct: 24 ISIEGNIAAGKSTFVNILKQVCED--WEVVP--EPVARWC---------NVQSTQNEFES 70 Query: 67 EAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--- 117 A + + R +++ +P L + + DR++ +S Y+ + + + Sbjct: 71 YACL-SRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQD 129 Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-----KDVMI 169 D + Q + D I L + L R+ R E L+Y E+ + ++ Sbjct: 130 WHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLL 189 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 H + F D + P +D F+ ++++ V E + Sbjct: 190 HRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHSSLVEKVKEFL 229 >gi|301325670|ref|ZP_07219131.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|300847525|gb|EFK75285.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|323966517|gb|EGB61950.1| gyghT [Escherichia coli M863] gi|323978938|gb|EGB74018.1| gyghT [Escherichia coli TW10509] gi|327251770|gb|EGE63456.1| hypothetical protein ECSTEC7V_3622 [Escherichia coli STEC_7v] Length = 230 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 75/239 (31%), Gaps = 54/239 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHV-----LLSCG 58 I+ G +G+GK+T L +++ VH+ ++ G A + L Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGN--VGRAVTKLPLMGKSLHKT 65 Query: 59 VDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQ 106 +++ + A+V A AR + G I+L DR+ AY Sbjct: 66 IEKNEVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYD 125 Query: 107 GER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSL 153 G + F+ L ++ PD I L++ +++ R R SL Sbjct: 126 GTVFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESL 183 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + + +D+ + V + + + + Sbjct: 184 ARKIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFM 224 >gi|114556431|ref|XP_001163827.1| PREDICTED: cytidylate kinase isoform 2 [Pan troglodytes] Length = 228 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + EGKI+ L R +D + A +R+ D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQRNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223 >gi|12644008|sp|P30085|KCY_HUMAN RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK gi|50513735|pdb|1TEV|A Chain A, Crystal Structure Of The Human UmpCMP KINASE IN OPEN Conformation gi|6563220|gb|AAF17204.1|AF112216_1 UMP-CMP kinase [Homo sapiens] gi|10764224|gb|AAG22609.1|AF259961_1 cytidine monophosphate kinase CMP [Homo sapiens] gi|33150592|gb|AAP97174.1|AF087865_1 UMP-CMPK [Homo sapiens] gi|5730476|gb|AAD48583.1| UMP-CMP kinase [Homo sapiens] Length = 196 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 10 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 48 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 155 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 191 >gi|124027036|ref|YP_001012356.1| thymidylate kinase [Hyperthermus butylicus DSM 5456] gi|123977730|gb|ABM80011.1| Thymidylate kinase [Hyperthermus butylicus DSM 5456] Length = 212 Score = 55.4 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 36/220 (16%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++F G+ G+GKT+ LL R P R V Sbjct: 3 LVAFVGVHGSGKTSTARLLARL----------------YPGCYIYREVEAIGEAAGLPPA 46 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHLFLDSL 120 A ++F A ++ + R A +GK ++ D + + + +G + L Sbjct: 47 ARQLLFYARFIERLVAAYREARSDGKTVVMDSHPLLVPVYTRWWLRGSGGGAAEAMEKLL 106 Query: 121 QEISVQEVMP--DCTIILDL--PVDIGLK-RVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++P D + + P++I + + R + RE A +Y + D + + Sbjct: 107 ------LILPPVDLLVYIRARDPLEIARRVLARGRATAREEADPEYIQFIDQEVSRLV-E 159 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + ++D+ ++ A + L + R Sbjct: 160 AYGARIARH---VLVLDAEAPLEAKARRVHEEYTRLTRGR 196 >gi|300824076|ref|ZP_07104197.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669803|ref|ZP_08370648.1| conserved hypothetical protein [Escherichia coli TA271] gi|331679060|ref|ZP_08379732.1| conserved hypothetical protein [Escherichia coli H591] gi|300523466|gb|EFK44535.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|320201900|gb|EFW76475.1| hypothetical protein ECoL_00525 [Escherichia coli EC4100B] gi|331062716|gb|EGI34630.1| conserved hypothetical protein [Escherichia coli TA271] gi|331073125|gb|EGI44448.1| conserved hypothetical protein [Escherichia coli H591] Length = 230 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +D+ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|156399323|ref|XP_001638451.1| predicted protein [Nematostella vectensis] gi|156225572|gb|EDO46388.1| predicted protein [Nematostella vectensis] Length = 253 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 74/208 (35%), Gaps = 33/208 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGA 64 ++ EG G+GKTT + RKN +V V EP ++L + Sbjct: 36 VAVEGNIGSGKTTLLKYF-----RKNDEVEVIEEPVSKWQNVGGSNLLELFYKDCQRWSF 90 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122 E+ H P K++ +R + S Y Y E + + S++ Sbjct: 91 LFESYALLTLMQIHKRPHTTPI----KMV--ERSVYSGY-YCFEHNLCASGLMASVEHGV 143 Query: 123 ------ISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173 ++ P D I L + ++R++ R E++ +D +H++ Sbjct: 144 HNDWFTWITEKEQPQLDLIIYLRTTPEKCMERIKQRCRSEETSVSMDLL----KELHDR- 198 Query: 174 RQIFLDIARNQ--PDRCHIVDSAHSFQS 199 + +L I + P IVD S Sbjct: 199 HEAWL-IEKKFPVPAPVVIVDGNRSLDE 225 >gi|7706497|ref|NP_057392.1| UMP-CMP kinase isoform a [Homo sapiens] gi|6578133|gb|AAF17709.1|AF070416_1 UMP-CMP kinase [Homo sapiens] gi|55960530|emb|CAI13471.1| cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Homo sapiens] gi|55962131|emb|CAI14972.1| cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Homo sapiens] gi|119627274|gb|EAX06869.1| cytidylate kinase, isoform CRA_a [Homo sapiens] gi|119627276|gb|EAX06871.1| cytidylate kinase, isoform CRA_a [Homo sapiens] gi|189053406|dbj|BAG35572.1| unnamed protein product [Homo sapiens] Length = 228 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223 >gi|281180027|dbj|BAI56357.1| conserved hypothetical protein [Escherichia coli SE15] Length = 230 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + VD+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------VDANQPLEKVLVDAEKAITDFMTAR 227 >gi|94971773|ref|YP_593821.1| deoxynucleoside kinase [Candidatus Koribacter versatilis Ellin345] gi|94553823|gb|ABF43747.1| deoxynucleoside kinase [Candidatus Koribacter versatilis Ellin345] Length = 221 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 25/177 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG GK+T ++ L+ + EP L S E GA Sbjct: 9 RYIAVEGPIRVGKSTLAKVVAETLRAQRI-----SEPEDN-------KFLRSFYEGERGA 56 Query: 65 EAEA-IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSL 120 +A + F R + + + P K+++ D ++ D +A D ++ Sbjct: 57 AFQAQMAFLIKRYEQLRALALPK-NPNKVIVSD-YIFEKDKIFASLNLDDMEFDVYDRYY 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + +PD I L ++ KR++ + + E + E Q + Sbjct: 115 KLFHQEIPVPDLVIYLQASTEVLKKRLKKKNAPGEV-------KVSEEYIEAVNQAY 164 >gi|282174160|ref|YP_003358262.1| ORF123 [Anguillid herpesvirus 1] gi|281309003|gb|ADA57886.1| ORF123 [Anguillid herpesvirus 1] Length = 263 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 43/266 (16%), Positives = 89/266 (33%), Gaps = 52/266 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M LFIS EG G GK+T ++ L R ++R + DV + A +V Sbjct: 1 MAHRLFISVEGGIGIGKSTFVNELVRVVERLRGLDVPTNEYDNTPRTVKTALNVKEGHKP 60 Query: 60 DEFGAEAE-------------AIVFAAARLDH------VENVIRPALMEG----KILLCD 96 A E + + +H + + L +I+ + Sbjct: 61 LVMAAIPEPVNLWRNFFGHNVLEEYLKDQDEHTFPFSTLVTMTMFNLHSQHTDARIIFSE 120 Query: 97 RFLDSSYAYQGERDSSQ-HLFLDSLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSL 153 R S+ +RD + L + ++ + PDC + + ++ R++ R Sbjct: 121 RCPYSNLQVFSKRDVVGMGQYRRRLAQYTMDTLGMKPDCYVYMKADPELIQDRIKKRGRP 180 Query: 154 RESACLDYFERKDV----MIHEKRRQIFLDIARNQPDR-----------CHIVDSAHSFQ 198 E+ + + + +HE+ + P+ +++ Sbjct: 181 EEAG----IDLEAIKSIHELHER------WLIPATPESATSEAGVRRDDVLVINCNGDVA 230 Query: 199 SVATNILNIVWELVQKRVSPLSSKKD 224 V NI ++ + K + L +K+ Sbjct: 231 EVMKNIPAVLEFIRDKARTKLRLEKE 256 >gi|170732078|ref|YP_001764025.1| deoxynucleoside kinase [Burkholderia cenocepacia MC0-3] gi|169815320|gb|ACA89903.1| deoxynucleoside kinase [Burkholderia cenocepacia MC0-3] Length = 228 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 26/167 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKT+ LL + + P P E Sbjct: 18 RYLVIEGPIGVGKTSLARLLGERWSMQ----TLLERPQDNPFLE---RFYRDTARYALPV 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + + FA R +I AL G+ ++ D + Q ++ + ++ Sbjct: 71 Q---LSFALQRAQQARELI-GALETGRPVIAD------FMPQKNDIFARLNLPEDEWQLY 120 Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 Q PD + L ++ R+Q R E D + Sbjct: 121 RSVATHVDVPQAPSPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|290561613|gb|ADD38206.1| Deoxynucleoside kinase [Lepeophtheirus salmonis] Length = 223 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 88/230 (38%), Gaps = 34/230 (14%) Query: 6 FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI EG G+GK+T + + DV + EP + A ++L + + Sbjct: 10 FIVAVEGNIGSGKSTMLKFFQSK------DVIIDPEPVDSWRNVAGENLL--NNMYKDPP 61 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAY---QGERDSSQHLFLD-- 118 + +L ++ + + KI+ +R + S ++ + +R + + L+ Sbjct: 62 RCSFTFQSYVQLTRLKLLEEHGNEKVKII--ERSIQSNNFVFLETAKKRKTLSDVELEVL 119 Query: 119 -----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI--- 169 +Q ++ + + D + L ++ R+Q R E LDY + Sbjct: 120 GSYHSWIQNHTISKHL-DLIVYLRTLPEVAYCRLQKRARAEERTVPLDYLQDLHDAYEDW 178 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 K+R F P ++D+ + +SV +L+ + + R PL Sbjct: 179 LMKKRHGF------PPAPVLVIDANQNIESV-EKLLSQNRDAILGRHRPL 221 >gi|193699895|ref|XP_001951473.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like [Acyrthosiphon pisum] Length = 390 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 51/175 (29%), Gaps = 21/175 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62 I EG G GKT L L R + L F Sbjct: 65 KLIVLEGPVGIGKTAVGHQLADLLGMHFMPDITMDAYYINDYGYDMRKLDPQLPVNCRSF 124 Query: 63 GAEAEAIV---FAAA---------RLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---- 106 F AA R H + I L G+ ++ +R S +A+ Sbjct: 125 DERNFLENPEHFNAASFQIIKYKLRYAHYIDAIAHLLNTGEGVIIERSPYSDFAFVEAMY 184 Query: 107 --GERDSSQHLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESAC 158 + L + ++ +++ P + LD PV L+ V+ R E Sbjct: 185 KCKYMSKAAREMYYILYKHAMPDLLHPHLVVYLDAPVPRLLELVKERKLPHEVNS 239 >gi|23821758|sp|Q9DBP5|KCY_MOUSE RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK gi|12836302|dbj|BAB23595.1| unnamed protein product [Mus musculus] Length = 196 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 10 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 48 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L+ + + + +D++ S V ++ I Sbjct: 155 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGEVVKI 191 >gi|307202760|gb|EFN82051.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Harpegnathos saltator] Length = 427 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 52/176 (29%), Gaps = 23/176 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 I EG + K L L E T R + Sbjct: 81 KIIVIEGPMTSNKAKLGQKLADELDMIYLPSPNFDEYYITNYGYDLRTLDDRLSIGAQSC 140 Query: 54 ----LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--- 106 L+ + F + D + L G+ ++ +R SS+ + Sbjct: 141 DLKKFLTNPHHPNVPMFQLHYFQL-KYDQYITALLHLLCTGQGVILNRSFYSSFVFAQAM 199 Query: 107 ---GERDSSQHLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESAC 158 G F + + ++ VM P I LDLPVD+ +R++ R E Sbjct: 200 TNAGYMRPQALRFYNKVVGMAEDAVMRPHLVIYLDLPVDVVQERIKKRGIPYEVNS 255 >gi|226875210|gb|ACO88953.1| cytidine monophosphate kinase 1, cytosolic (predicted) [Dasypus novemcinctus] Length = 228 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A + R + Sbjct: 42 GGPGAGKGTQCTRIVEK-----------YGYTHLSAGDLLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYA--YQGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMASNAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVAFVLFFDCNNEICIERCLERGKSSGRTDDNR---ESL---EKRIQT 186 Query: 177 FLD----IARNQPD--RCHIVDSAHSFQSVATNILNI 207 +L I + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYKEMGKVKKIDASKSVDEVFDEVVKI 223 >gi|255629041|gb|ACU14865.1| unknown [Glycine max] Length = 237 Score = 55.4 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 57/213 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + Y A + R + S + Sbjct: 27 GGPGSGKGTQCANIVQNF---GY--------THLSAGDLLRAEIKSGSENG--------- 66 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 67 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 110 Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + + P + D P + +R+ +R RE ++ ++ + E Sbjct: 111 NRAAFEKVTGIEPAFVLFFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLESSLPVI 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + + H +D+A + V + I Sbjct: 171 NYY-----DAKGKVHKIDAARPIEEVFETVKAI 198 >gi|303244020|ref|ZP_07330359.1| signal recognition particle-docking protein FtsY [Methanothermococcus okinawensis IH1] gi|302485672|gb|EFL48597.1| signal recognition particle-docking protein FtsY [Methanothermococcus okinawensis IH1] Length = 271 Score = 55.0 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT I+ L L+ K Y V + G T A A L G Sbjct: 67 IVFVGINGTGKTTSIAKLAHKLKNKGYSVVLAA--GDTFRAGAIEQ--LEEHAKNIGVRV 122 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A G ++L D R ++ +D +++ V Sbjct: 123 IKHQKGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNINLMDEIKK-VV 172 Query: 126 QEVMPDCTII 135 + PD + Sbjct: 173 RVTKPDLVVF 182 >gi|170680580|ref|YP_001745251.1| hypothetical protein EcSMS35_3271 [Escherichia coli SMS-3-5] gi|170518298|gb|ACB16476.1| conserved hypothetical protein [Escherichia coli SMS-3-5] Length = 230 Score = 55.0 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +++ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------INANQPLEQVLVDAEKAIMDFMTAR 227 >gi|307102652|gb|EFN50922.1| hypothetical protein CHLNCDRAFT_141713 [Chlorella variabilis] Length = 222 Score = 55.0 bits (132), Expect = 6e-06, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 49/213 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + L + V A + R + S + Sbjct: 47 GGPGSGKGTQSARLVQEF-----GVVHLS------AGDLLREHMKSGSPEG--------- 86 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL------DSLQEIS 124 V ++I+ G+I+ + S + DS +H FL + S Sbjct: 87 ------QMVADMIK----NGQIVPS--HVTISLLQKAMDDSGKHKFLIDGFPRNEENRAS 134 Query: 125 VQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178 + +MPD + D P ++ +R+ R R ++ ++ + + Q + Sbjct: 135 FESQTGIMPDLVLFFDCPEEVMERRLLGRNEGRTDDNIETIRKRFKVFIDSSLPVIQHYE 194 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + +++ + + + + EL Sbjct: 195 AL-----GKVARINADRDTEEIYKEVRRLFMEL 222 >gi|260878748|ref|ZP_05891103.1| deoxyguanosine kinase, (dGK) [Vibrio parahaemolyticus AN-5034] gi|308091235|gb|EFO40930.1| deoxyguanosine kinase, (dGK) [Vibrio parahaemolyticus AN-5034] Length = 195 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 19/171 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GK+T + L L ++ E + LL + E Sbjct: 3 YITLEGNVGVGKSTLLHRLADEL---GWEAV--EEGIEFDEGFQS---LLKERYENPTPE 54 Query: 66 --AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+ ++ A + I +L K + +R + ++ + ++ +D+L Sbjct: 55 NVAKLQLYVANF---MAERIN-SLDPNKYYVVERSVFATELFSLAA--NRPDIIDALAGH 108 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEK 172 ++ P+ + L P + L+R+ R E L+Y + IHE+ Sbjct: 109 VLRVPAPEFYLYLSAPPRLCLERIHERDRTGEGEGISLEYL-QTLHDIHER 158 >gi|302875810|ref|YP_003844443.1| hypothetical protein Clocel_2987 [Clostridium cellulovorans 743B] gi|302578667|gb|ADL52679.1| hypothetical protein Clocel_2987 [Clostridium cellulovorans 743B] Length = 297 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 18/149 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 M + I EG+ G+GK+T ++ +L+++ + E + S Sbjct: 17 MKA-KLIVIEGLPGSGKSTISEMVYEYLRQRGINAEFYSESSYDHPVDFDGVAYFSNEKF 75 Query: 60 ---DEFGAEAEAIVFAAARLDHVENVI--RPALMEGKILLCDRFLDSSY-------AYQG 107 ++ + ++ H +I R + E KI F DS + YQ Sbjct: 76 MVLEQKHLSHKELLNKIKVNFHQRYLIPYRKVIEEQKI----SFQDSLFKDITKSDVYQL 131 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIIL 136 + + + + + + D I Sbjct: 132 PIELHKTIMIKRWNDFVNNHINEDKVFIF 160 >gi|225850756|ref|YP_002730990.1| adenylate kinase (ATP-AMP transphosphorylase) [Persephonella marina EX-H1] gi|225645320|gb|ACO03506.1| adenylate kinase (ATP-AMP transphosphorylase) [Persephonella marina EX-H1] Length = 206 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 48/224 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G GAGK T L K + T + R + E G +A+ Sbjct: 7 FLGPPGAGKGTQAQRLVE---EKGFVQLST--------GDILREAVKKG--TELGKKAKE 53 Query: 69 IVFAAARL--DHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + D + +I L E GK ++ D F R Q LD + Sbjct: 54 YMEAGKLVPDDLIIAIIEEKLKELEGKDIILDGF---------PRTIPQAEALDRMLPAV 104 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------------RKDV--MIH 170 + + D I+ DL + L+R+ R ++ + + E R+D + Sbjct: 105 GRTL--DKVILFDLSDEEILRRLTGRRVDPKTGKVYHIEFNPPPEGVEVIQREDDREEVI 162 Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208 KR +++ ++ +VD++ S V IL+++ Sbjct: 163 RKRLEVYHQQTAPLIEYYRNQNKLFVVDASKSPDEVYKEILSVI 206 >gi|192360781|ref|YP_001980910.1| putative deoxypurine kinase [Cellvibrio japonicus Ueda107] gi|190686946|gb|ACE84624.1| predicted deoxypurine kinase [Cellvibrio japonicus Ueda107] Length = 227 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 16/171 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+ EG G GKTT L + NYD + +P P E Sbjct: 19 RFIAVEGCIGVGKTTLARNLAQLF---NYDTLL-EQPEQNPFLE---RFYRDPKSTALPT 71 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + F R + + ++ + L E + L D D +A D ++ Sbjct: 72 Q---LFFLFQRANQIHSLRQNDLFEPVRVADFLID--KDQLFARVTLDDDEFAIYRQVYD 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171 ++ + PD I L P+++ R++ R E DY + + E Sbjct: 127 KLVIDAPRPDLVIYLQAPLNVLGDRIRQRGIAAEQYISQDYLQALNDAYTE 177 >gi|13357642|ref|NP_077916.1| deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762265|ref|YP_001752166.1| deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920384|ref|ZP_02931712.1| deoxyguanosine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508647|ref|ZP_02958146.1| deoxyguanosine kinase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701763|ref|ZP_02971447.1| deoxyguanosine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|11356835|pir||E82935 deoxyguanosine kinase UU086 [imported] - Ureaplasma urealyticum gi|6899038|gb|AAF30491.1|AE002108_4 deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827842|gb|ACA33104.1| deoxyguanosine kinase [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902818|gb|EDT49107.1| deoxyguanosine kinase [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182676113|gb|EDT88018.1| deoxyguanosine kinase [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701037|gb|EDU19319.1| deoxyguanosine kinase [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 232 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 80/224 (35%), Gaps = 29/224 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I+F GK+T L Q N V+ E + +LL+ + Sbjct: 25 GGM-IAF------GKSTLAQALHEKYQPSNV-VYEMVE------GDKLMDLLLAKMYERE 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL 120 +F + + + + + DR F D +A+ S + D L Sbjct: 71 NNVLFGSLFQLYFVLNRFANYKNNCNRKSLTIFDRSIFEDWLFAHANIDKPSVFSYYDGL 130 Query: 121 QEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + +E+ +P +ILD ++ +R+ R E E ++ + Sbjct: 131 WQGVCKELIYEHGVPKLYVILDGDWELFKERIFKRNRKVEIDNFSINE----TYFKRLLE 186 Query: 176 IFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ + + ++ ++D+ +S + + I+ +L ++ Sbjct: 187 MYKNYMVNVCKDFGINYVVLDANNSVEQNVDEVTKILQKLENEQ 230 >gi|302318903|ref|NP_001180547.1| UMP-CMP kinase [Macaca mulatta] Length = 228 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223 >gi|15928999|gb|AAH14961.1| Cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Homo sapiens] gi|62897589|dbj|BAD96734.1| UMP-CMP kinase variant [Homo sapiens] gi|123982796|gb|ABM83139.1| cytidylate kinase [synthetic construct] gi|123997465|gb|ABM86334.1| cytidylate kinase [synthetic construct] gi|123997467|gb|ABM86335.1| cytidylate kinase [synthetic construct] gi|261860680|dbj|BAI46862.1| cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [synthetic construct] Length = 228 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + EGKI+ L R +D + A +++ D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223 >gi|307689244|ref|ZP_07631690.1| hypothetical protein Ccel74_13889 [Clostridium cellulovorans 743B] Length = 320 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 18/149 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 M + I EG+ G+GK+T ++ +L+++ + E + S Sbjct: 40 MKA-KLIVIEGLPGSGKSTISEMVYEYLRQRGINAEFYSESSYDHPVDFDGVAYFSNEKF 98 Query: 60 ---DEFGAEAEAIVFAAARLDHVENVI--RPALMEGKILLCDRFLDSSY-------AYQG 107 ++ + ++ H +I R + E KI F DS + YQ Sbjct: 99 MVLEQKHLSHKELLNKIKVNFHQRYLIPYRKVIEEQKI----SFQDSLFKDITKSDVYQL 154 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIIL 136 + + + + + + D I Sbjct: 155 PIELHKTIMIKRWNDFVNNHINEDKVFIF 183 >gi|193067253|ref|ZP_03048221.1| conserved hypothetical protein [Escherichia coli E110019] gi|192959210|gb|EDV89645.1| conserved hypothetical protein [Escherichia coli E110019] Length = 230 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTMCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAIMDFMTAR 227 >gi|71662282|ref|XP_818150.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70883384|gb|EAN96299.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 261 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 55/171 (32%), Gaps = 22/171 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N I EGI+G GK+ L L + R P LS + Sbjct: 49 NQKTLIVLEGIDGVGKSLVAQSLIEKL---GDSAVLIRTPHPD----------LSGIRET 95 Query: 62 FGAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-- 117 F A+ E A F +A A E K ++ DR+ S+ A Sbjct: 96 FRAQTEETARAFYSAANYLAAWDAFHATKERKFVVFDRWWCSTCAMALANSCRLAALPAA 155 Query: 118 -DSLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 D++ + +P + +L + I R++ R +++ Sbjct: 156 GDAVYQWPQD--LPPFQLGALLYVEEHIRQARIRQRAPEDAEERRLRAQQE 204 >gi|256024428|ref|ZP_05438293.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia sp. 4_1_40B] Length = 230 Score = 55.0 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPFMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +D+ R R SL Sbjct: 128 VFPPNIEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLIDAEKAITDFMTAR 227 >gi|293412364|ref|ZP_06655087.1| ATP-binding protein yghT [Escherichia coli B354] gi|291469135|gb|EFF11626.1| ATP-binding protein yghT [Escherichia coli B354] Length = 230 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +D+ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|322494227|emb|CBZ29524.1| putative RNA guanylyltransferase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 684 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 69/209 (33%), Gaps = 47/209 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + + + G P AE + V D FG +A+ Sbjct: 140 GCRGSGKTTQAESIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KDNFGPDAK--- 191 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R G ++ DRF+ + + +L Q +P Sbjct: 192 ---DRSY-----------NG--VVLDRFV-------ATGEMDAYYLQAALN--VCQLPVP 226 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188 L + GL+R Q R + A + +R I ++ + I Sbjct: 227 -LVFWLQVDPKEGLRRAQCRGDQKAGADHWRYVEQRAQAEIADRV---YKKI-----GVL 277 Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215 HI+D ++ V I +I+ L KR Sbjct: 278 HIIDCNA-LEARRVGDRICSIIDGLFPKR 305 >gi|157873906|ref|XP_001685452.1| RNA guanylyltransferase [Leishmania major strain Friedlin] gi|68128524|emb|CAJ08656.1| putative RNA guanylyltransferase [Leishmania major strain Friedlin] Length = 692 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 47/209 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + + + G P AE + V D FG +A+ Sbjct: 148 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KDNFGPDAK--- 199 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++L DRF+ + + +L Q +P Sbjct: 200 ---DRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--VCQLPVP 234 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188 L + GL+R Q+R + A + +R I ++ + I Sbjct: 235 -LVFWLQVDPKEGLRRAQSRGDQKAGADHWRYVEQRAQAEIADRV---YKKI-----GVL 285 Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215 H++D ++ V I +I+ L KR Sbjct: 286 HVIDCNA-LEARRVGDRIYSIIDGLFPKR 313 >gi|194764805|ref|XP_001964519.1| GF23227 [Drosophila ananassae] gi|190614791|gb|EDV30315.1| GF23227 [Drosophila ananassae] Length = 249 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 81/204 (39%), Gaps = 27/204 (13%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT++ + ++ N DV + EP ++L + + A Sbjct: 25 IEGNIGSGKTTYLK----YFEKFN-DVCLLTEPVEKWRNVNGVNLL---ELMYKDPKKWA 76 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P + K+ + +R + S+ Y + S + ++L E Sbjct: 77 MPFQSYVTLTMLQSHTAP--TDKKLKIMERSIFSARYCFVENMRRNGSLEDGMYNTLTEW 134 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + D I L ++ +R++ R ES + ++ +HE Sbjct: 135 YKFIDESIHIQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHED-----W 189 Query: 179 DIARNQPDRCHIV--DSAHSFQSV 200 I +P C ++ D+ + +++ Sbjct: 190 LIYHRRPQACKVIVLDADLNLENI 213 >gi|109087285|ref|XP_001092713.1| PREDICTED: UMP-CMP kinase-like isoform 1 [Macaca mulatta] Length = 228 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 65/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + EGKI+ L R +D + A ++ D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAHKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R S+ + E EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGSSDDNR-ESS-----EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223 >gi|57640273|ref|YP_182751.1| putative kinase [Thermococcus kodakarensis KOD1] gi|68568745|sp|Q5JG26|KAD6_PYRKO RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|57158597|dbj|BAD84527.1| predicted nucleotide kinase, related to CMP and AMP kinases [Thermococcus kodakarensis KOD1] Length = 177 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 67/214 (31%), Gaps = 55/214 (25%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G GKTT LL L Y+ R+ + L VDE Sbjct: 1 MIIAVTGTPGVGKTTISKLLAEKL---GYEYVNLRDYALEKGIGEMKENELEIDVDEL-- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + GK ++ D L Sbjct: 56 -----------REAFGRDFK-----GKNVVADGHL------------------------- 74 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + D I+L + +R++ R RE + E + V + L A + Sbjct: 75 SHFLKADLVIVLRANPKLIAERLKERGYGREKLGEN-VEAELVDVI-------LVEALEE 126 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + VD+ + + V ILN++ V++RV Sbjct: 127 NENVIEVDTTGKTPEEVVEEILNLIRRGVKRRVG 160 >gi|297665010|ref|XP_002810903.1| PREDICTED: UMP-CMP kinase-like isoform 1 [Pongo abelii] Length = 228 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 65/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T S + A E R + Sbjct: 42 GGPGAGKGTQCSRIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223 >gi|61368998|gb|AAX43269.1| UMP-CMP kinase [synthetic construct] Length = 229 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + EGKI+ L R +D + A +++ D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQI 223 >gi|71043752|ref|NP_001020826.1| UMP-CMP kinase [Rattus norvegicus] gi|68534162|gb|AAH98727.1| Cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Rattus norvegicus] gi|149035644|gb|EDL90325.1| cytidylate kinase [Rattus norvegicus] Length = 227 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 41 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 78 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 79 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 131 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I + R R + + + + EKR Q Sbjct: 132 LQGWNKTMDGKADVSFVLFFDCNNEICIDRCLERGKSSGRSDDNR---ESL---EKRIQT 185 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L+ + + + +D++ S V +++ I Sbjct: 186 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGDVMKI 222 >gi|297808663|ref|XP_002872215.1| uridylate kinase [Arabidopsis lyrata subsp. lyrata] gi|297318052|gb|EFH48474.1| uridylate kinase [Arabidopsis lyrata subsp. lyrata] Length = 202 Score = 55.0 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 64/220 (29%), Gaps = 57/220 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + Y A + R + S + Sbjct: 21 GGPGSGKGTQCAYIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 60 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 61 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAIQENGNDKFLIDGFPRNEE 104 Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + E+ P + D P + KR+ R RE ++ ++ + E Sbjct: 105 NRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVI 164 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 Q + + +++A ++V + I +K Sbjct: 165 QYY-----EAKGKVRKINAAKPIEAVFEEVKAIFSPEAEK 199 >gi|86740517|ref|YP_480917.1| thymidylate kinase-like protein [Frankia sp. CcI3] gi|86567379|gb|ABD11188.1| Thymidylate kinase-like [Frankia sp. CcI3] Length = 204 Score = 54.6 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 8/102 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ EG +GKTT L + + V EP +++ + F E Sbjct: 8 VAVEGTHASGKTTLTHALAAHFRERGVHVACVPEPARNSP--FIEEIVVHGRGE-FDLET 64 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 E +FAA + + +R A + +++CD+ + + AY Sbjct: 65 EVDLFAA----QLSSQLRVA-RQHTMIICDKTIANVLAYAWL 101 >gi|167950692|ref|ZP_02537766.1| hypothetical protein Epers_31521 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 40 Score = 54.6 bits (131), Expect = 8e-06, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 23/37 (62%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 G FI+ EG EGAGK++++ +++ L+ + V T Sbjct: 4 KQGRFITVEGGEGAGKSSNLDFIRQQLEAQGKQVLFT 40 >gi|195053512|ref|XP_001993670.1| GH20975 [Drosophila grimshawi] gi|193895540|gb|EDV94406.1| GH20975 [Drosophila grimshawi] Length = 408 Score = 54.6 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 24/226 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 I EG AGKT L L + Y P R + Sbjct: 84 KVICVEGPIAAGKTKFAQELAAELDMQYYPAVDLDLIYINPYGYDMRKLDPELPPSCRSY 143 Query: 54 -LLSCGVDEFGAEAEAIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 + + A R + ++ L G+ ++ +R S + + Sbjct: 144 DVRDFCKNPNHDLAALFQIRMYMLRYSQYVDALQHILSTGQGVVLERSPYSDFVFMEAMF 203 Query: 106 -QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 QG + L++ ++ E+ P I LD P++ ++++ R E + E Sbjct: 204 RQGYISRGARSVYNELRQNTIGELLKPHLVIYLDQPIEAVQRQIKTRNLEHEVKSKVFSE 263 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 + +Q +L + I D + + V +I I Sbjct: 264 AYLRDLESLYKQQYLKDIVGHAE-LLIYDWTAGGETEVVVEDIERI 308 >gi|195978930|ref|YP_002124174.1| deoxyguanosine kinase [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975635|gb|ACG63161.1| deoxyguanosine kinase [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 213 Score = 54.6 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 51/234 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L +V P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117 + A + L+ I+ A +L DR + + Y+ + L + Sbjct: 47 KKYAFLLQIFFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQ 105 Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167 + L+E+ + + PD I +D+ + L+R++ R FE+ D Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFEKMLERIEKRGR--------RFEQVDDNPDLE 157 Query: 168 MIHEKRRQIF---LDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + + + + P +D + + +AT +L ++ E ++ Sbjct: 158 AYYHQVHGEYPTWYERYDVSPK--MRIDGNKLDFVQNPEDLAT-VLQMIDEKLK 208 >gi|330686249|gb|EGG97861.1| deoxyguanosine kinase [Staphylococcus epidermidis VCU121] Length = 202 Score = 54.6 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 63/164 (38%), Gaps = 21/164 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI+ EG G GK++ L + L V P + + Sbjct: 1 MNKP-FIAIEGPIGVGKSSLAHKLSQSLDFYEEKEIVDENPFLSDFYDDI---------S 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS- 119 ++ + E + F R +++ +L +G ++ D + + + +++ + Sbjct: 51 KWSFQTE-MFFLCNRYKQFKDI--ESLHKG--IVSDYHIYKNKIF--AKNTLDRHEFNKF 103 Query: 120 --LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + +I +++ MP+ I LD +D+ R+ R E D Sbjct: 104 SRIYDILTEDLTMPNTIIFLDAELDVLKHRIAKRNRSFEHQIED 147 >gi|217075148|gb|ACJ85934.1| unknown [Medicago truncatula] Length = 208 Score = 54.6 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 66/209 (31%), Gaps = 49/209 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 28 GGPGSGKGTQCANVVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 67 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL------DSLQEIS 124 +I+ + EGKI+ + + Q +D+ FL + + Sbjct: 68 ----------TMIQNMIKEGKIVPSE--VTIRLLQQAIKDNGNDKFLIDGFPRNEENRAA 115 Query: 125 VQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178 + + P + D P + +R+ +R RE ++ ++ + + + Sbjct: 116 FERVTGIEPAFVLYFDCPEEEMERRLLSRNQGREDDNIETIRKRFKVFLDSSLPVINYY- 174 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + VD+A + V ++ I Sbjct: 175 ----DAKGKVRKVDAARPVEEVFESVKAI 199 >gi|160902235|ref|YP_001567816.1| nucleoside-triphosphate--adenylate kinase [Petrotoga mobilis SJ95] gi|189028358|sp|A9BFZ7|KAD_PETMO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|160359879|gb|ABX31493.1| Nucleoside-triphosphate--adenylate kinase [Petrotoga mobilis SJ95] Length = 215 Score = 54.6 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 85/228 (37%), Gaps = 49/228 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + Q VH+ + R + E G A+AI+ Sbjct: 7 GPPGAGKGTQAKKVAQEFQI----VHI-------STGDILRDAV--SKGTELGKMAKAIM 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R + V + I +L++ ++ D F+ Y R Q FLD + +E+ Sbjct: 54 ---DRGELVSDEIMNSLVKERLEELDSFILDGY----PRTLDQAKFLDQATKELQKEI-- 104 Query: 131 DCTIILDLPVDIGLKRVQNRY--------------SLRESACLD----YFERKDVMIHEK 172 D +++D+ + +KR+ NR +E D ++D E Sbjct: 105 DAAVLIDVSEEEIVKRISNRRVCPNCGKVYNLITLQPKEDEKCDVCGTKLIQRDDDKEEV 164 Query: 173 RRQIFLDIARN-QP--------DRCHIVDSAHSFQSVATNILNIVWEL 211 R+ + +N +P ++ +D A + + V + NI+ Sbjct: 165 VRERYKVYKKNTEPVIEYYRKNNKIITIDGAQNVEDVTKELFNILRSF 212 >gi|185177722|pdb|2ZI4|A Chain A, C4s Dck Variant Of Dck In Complex With L-Da+adp gi|185177723|pdb|2ZI5|A Chain A, C4s Dck Variant Of Dck In Complex With L-Da+udp gi|185177724|pdb|2ZI5|B Chain B, C4s Dck Variant Of Dck In Complex With L-Da+udp gi|185177725|pdb|2ZI5|C Chain C, C4s Dck Variant Of Dck In Complex With L-Da+udp gi|185177726|pdb|2ZI5|D Chain D, C4s Dck Variant Of Dck In Complex With L-Da+udp gi|185177727|pdb|2ZI6|A Chain A, C4s Dck Variant Of Dck In Complex With D-Da+udp gi|185177728|pdb|2ZI6|B Chain B, C4s Dck Variant Of Dck In Complex With D-Da+udp gi|185177729|pdb|2ZI6|C Chain C, C4s Dck Variant Of Dck In Complex With D-Da+udp gi|185177730|pdb|2ZI6|D Chain D, C4s Dck Variant Of Dck In Complex With D-Da+udp gi|193885263|pdb|2ZI7|B Chain B, C4s Dck Variant Of Dck In Complex With D-Dg+udp gi|193885264|pdb|2ZI7|A Chain A, C4s Dck Variant Of Dck In Complex With D-Dg+udp gi|193885267|pdb|2ZIA|A Chain A, C4s Dck Variant Of Dck In Complex With Cladribine+udp gi|193885268|pdb|2ZIA|B Chain B, C4s Dck Variant Of Dck In Complex With Cladribine+udp gi|301598591|pdb|3MJR|A Chain A, Human Dck Complex With Acyclic Nucleoside gi|301598592|pdb|3MJR|B Chain B, Human Dck Complex With Acyclic Nucleoside gi|301598593|pdb|3MJR|C Chain C, Human Dck Complex With Acyclic Nucleoside gi|301598594|pdb|3MJR|D Chain D, Human Dck Complex With Acyclic Nucleoside gi|306991646|pdb|3KFX|A Chain A, Human Dck Complex With 5-Me Dc And Adp gi|306991647|pdb|3KFX|B Chain B, Human Dck Complex With 5-Me Dc And Adp Length = 279 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V V R + + + Sbjct: 43 ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNV 100 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 101 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 160 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 276 >gi|134104939|pdb|2NO9|A Chain A, The Structure Of Deoxycytidine Kinase Complexed With Troxacitabine And Adp. gi|134104940|pdb|2NO9|B Chain B, The Structure Of Deoxycytidine Kinase Complexed With Troxacitabine And Adp. gi|134104941|pdb|2NOA|A Chain A, The Structure Of Deoxycytidine Kinase Complexed With Lamivudine And Adp. gi|134104942|pdb|2NOA|B Chain B, The Structure Of Deoxycytidine Kinase Complexed With Lamivudine And Adp. gi|151567752|pdb|2NO0|A Chain A, C4s Dck Variant Of Dck In Complex With Gemcitabine+adp gi|151567753|pdb|2NO0|B Chain B, C4s Dck Variant Of Dck In Complex With Gemcitabine+adp gi|151567754|pdb|2NO1|A Chain A, C4s Dck Variant Of Dck In Complex With D-Dc+adp gi|151567755|pdb|2NO1|B Chain B, C4s Dck Variant Of Dck In Complex With D-Dc+adp gi|151567756|pdb|2NO6|A Chain A, C4s Dck Variant Of Dck In Complex With Ftc+adp gi|151567757|pdb|2NO6|B Chain B, C4s Dck Variant Of Dck In Complex With Ftc+adp gi|151567758|pdb|2NO7|A Chain A, C4s Dck Variant Of Dck In Complex With L-Dc+adp gi|151567759|pdb|2NO7|B Chain B, C4s Dck Variant Of Dck In Complex With L-Dc+adp Length = 280 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V V R + + + Sbjct: 44 ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNV 101 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 102 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 161 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 162 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 221 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 222 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 277 >gi|331654597|ref|ZP_08355597.1| conserved hypothetical protein [Escherichia coli M718] gi|331047979|gb|EGI20056.1| conserved hypothetical protein [Escherichia coli M718] Length = 230 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACMRKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|297292758|ref|XP_001093411.2| PREDICTED: deoxycytidine kinase [Macaca mulatta] Length = 260 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 88/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKNGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L+ + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLLFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P I+D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTDF-DYLQEVP--ILILDVNEDFKDKHESLVEKVKEFL 257 >gi|301017319|ref|ZP_07182083.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300400292|gb|EFJ83830.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 230 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + F+ L ++ PD I L++ +D+ R + Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVSLDVACAR----KPDHKRE 181 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L+ + I + + +D+ + V + + + + R Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEKVLVDAEKAITDFMTAR 227 >gi|146096485|ref|XP_001467822.1| RNA guanylyltransferase [Leishmania infantum JPCM5] gi|134072188|emb|CAM70889.1| putative RNA guanylyltransferase [Leishmania infantum JPCM5] Length = 1105 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 70/209 (33%), Gaps = 47/209 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + + + G P AE + V D FG +A+ Sbjct: 561 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KDNFGPDAK--- 612 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++L DRF+ + + +L Q +P Sbjct: 613 ---DRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--VCQLPVP 647 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188 L + GL+R Q+R + + + +R I ++ + I Sbjct: 648 -LVFWLQVDPKEGLRRAQSRGDQKAGSDHWRYVEQRAQAEIADRV---YKKI-----GVL 698 Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215 H++D ++ V I +I+ L KR Sbjct: 699 HVIDCNA-LEARRVGDRIYSIIDGLFPKR 726 >gi|34497089|ref|NP_901304.1| deoxyguanosine kinase [Chromobacterium violaceum ATCC 12472] gi|34102946|gb|AAQ59310.1| deoxyguanosine kinase [Chromobacterium violaceum ATCC 12472] Length = 211 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 26/182 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGV 59 M+ ++ EG G+GK++ L + + V + E P P Sbjct: 1 MSQLRYVVVEGPIGSGKSSLARRLSEY-----WGVQLKAEDPAANPFLPRFYR------N 49 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLF 116 A + + F R D +I L ++ D FL D+ +A D + Sbjct: 50 MPAHALSTQLSFLLQRADIAREMISGELQAAPLV-SD-FLFEKDALFAR-LNLDEHELAI 106 Query: 117 LDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L +++ E +PD I L DI L+RV R E + ++ Sbjct: 107 YQRLARLALPEYPVPDLVIYLQASEDILLQRVAARAVDYEVNFPE-------GYLKRVHA 159 Query: 176 IF 177 + Sbjct: 160 GY 161 >gi|185177720|pdb|2ZI3|A Chain A, C4s-E247a Dck Variant Of Dck In Complex With D-Da+adp gi|185177721|pdb|2ZI3|B Chain B, C4s-E247a Dck Variant Of Dck In Complex With D-Da+adp gi|193885265|pdb|2ZI9|A Chain A, C4s-E247a Dck Variant Of Dck In Complex With Cladribine+adp gi|193885266|pdb|2ZI9|B Chain B, C4s-E247a Dck Variant Of Dck In Complex With Cladribine+adp Length = 279 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V V R + + + Sbjct: 43 ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNV 100 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 101 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 160 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYASLVEKVKEFL 276 >gi|86130741|ref|ZP_01049340.1| 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)/deoxynucleoside kinase [Dokdonia donghaensis MED134] gi|85818152|gb|EAQ39312.1| 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)/deoxynucleoside kinase [Dokdonia donghaensis MED134] Length = 372 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 32/196 (16%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ +++ K + + R + F E Sbjct: 178 YIAIEGNIGAGKTSLATMISEEFNAK---LILERFKDNAFLPKF----YKDPDRFAFPLE 230 Query: 66 AEAIVFAAARLDHVENVI------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F A R + + I + + DR+ +A Q +++ Sbjct: 231 MS---FLADRYQQLLDDIGQFDLFKDFMCADY----DRYKSLIFA-QVTLQEEEYVLYKR 282 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 L E+ ++ PD + L + LK ++ R E + +Y E K Q + Sbjct: 283 LHEMMYKDMPQPDLYVYLYQNTERLLKNIKKRGRSYEKSIAPEYLE--------KINQGY 334 Query: 178 LDIARNQPD-RCHIVD 192 LD + Q + I+D Sbjct: 335 LDFIKGQHNLNVKIID 350 >gi|225711582|gb|ACO11637.1| Deoxynucleoside kinase [Caligus rogercresseyi] Length = 255 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 32/215 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG GAGKTT + +K F V T EP ++ LL + + Sbjct: 36 IVVEGNIGAGKTTFLQNIKDFSPPDLIHV--TDEPVLEWKTYKGKYDLLDMMYE--DPKK 91 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSL 120 + +F + + + I L +R S A + L L Sbjct: 92 WSFLFQVQVQLSMMKKYKAPVEAP-IRLMER----SLARFCFVENLHNNGLLNDVELHML 146 Query: 121 QEISVQEVM-------PDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHE 171 ++ + D + L ++ +R+ ++R +S L++F R +HE Sbjct: 147 NDLYNFTIEHECFVCSTDLIVYLRTSPEVAYERMLSRSRSEAEKSLSLEHF-RNIHDLHE 205 Query: 172 K--RRQI-FLDIARNQPDRCHIVDSAHSFQSVATN 203 R+ F + P ++D + + Sbjct: 206 DWLVRKTKFQPL----PCPVVVIDGDKGAEELRAE 236 >gi|150383503|sp|Q4KM73|KCY_RAT RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK Length = 196 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 10 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EGKI+ L R +D + A Q + D+ Sbjct: 48 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I + R R + + + + EKR Q Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIDRCLERGKSSGRSDDNR---ESL---EKRIQT 154 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L+ + + + +D++ S V +++ I Sbjct: 155 YLESTKPIIDLYEEMGKVKKIDASKSVDEVFGDVMKI 191 >gi|115653220|ref|XP_792429.2| PREDICTED: similar to MGC83091 protein, partial [Strongylocentrotus purpuratus] gi|115934467|ref|XP_001190398.1| PREDICTED: similar to MGC83091 protein, partial [Strongylocentrotus purpuratus] Length = 325 Score = 54.6 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 19/180 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE------------AARH 52 + +G GAGKT+ L L K E + Sbjct: 29 KIVVIDGNIGAGKTSLAKGLANQLGMKYMKEATIHYFDEKELGEGKKYDDKFMGSCSLER 88 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106 + + + A R + ++ L G+ ++ +R + S + Sbjct: 89 FYADPFAKDGHSFRFQLAMYAVRFVQYADALQHLLETGQGVVLERSVYSDSVFMEAMFKM 148 Query: 107 GERDSSQHLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 G + + +++IS+ + P C I +D PV + V++R L+ E + Sbjct: 149 GYFRKECYDYYQEVEKISMYRLKPPHCVIYMDTPVADLIDNVKSRGLNIPIEYLEALEDE 208 >gi|331664601|ref|ZP_08365507.1| hypothetical ATP-binding protein YghT [Escherichia coli TA143] gi|331058532|gb|EGI30513.1| hypothetical ATP-binding protein YghT [Escherichia coli TA143] Length = 230 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 46/238 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPG------------GTPAAEAA- 50 I+ G +G+GK+T L +++ VH+ ++ G G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTNLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + F+ L ++ PD I L++ +D+ R + Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVSLDVACAR----KPDHKRE 181 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L+ + I + + +D+ + V + + + + R Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAIMDFMTTR 227 >gi|326328032|pdb|3QEJ|A Chain A, S74e-Dck Mutant In Complex With Udp gi|326328033|pdb|3QEJ|B Chain B, S74e-Dck Mutant In Complex With Udp gi|326328034|pdb|3QEN|A Chain A, S74e Dck In Complex With 5-Bromodeoxycytidine And Udp gi|326328035|pdb|3QEN|B Chain B, S74e Dck In Complex With 5-Bromodeoxycytidine And Udp Length = 279 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V V R + + + Sbjct: 43 ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMEQKNGGNV 100 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 101 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 160 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 276 >gi|162330060|pdb|2QRN|A Chain A, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product Complex gi|162330061|pdb|2QRN|B Chain B, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product Complex gi|162330062|pdb|2QRN|C Chain C, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product Complex gi|162330063|pdb|2QRN|D Chain D, Human Deoxycytidine Kinase Dcmp, Udp, Mg Ion Product Complex gi|162330064|pdb|2QRO|A Chain A, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product Complex gi|162330065|pdb|2QRO|B Chain B, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product Complex gi|162330066|pdb|2QRO|C Chain C, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product Complex gi|162330067|pdb|2QRO|D Chain D, Human Deoxycytidine Kinase Damp, Udp, Mg Ion Product Complex Length = 280 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 44 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 101 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 102 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 161 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 162 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 221 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 222 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 277 >gi|60829963|gb|AAX36904.1| deoxycytidine kinase [synthetic construct] Length = 261 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|54696740|gb|AAV38742.1| deoxycytidine kinase [synthetic construct] gi|54696742|gb|AAV38743.1| deoxycytidine kinase [synthetic construct] gi|61367804|gb|AAX43049.1| deoxycytidine kinase [synthetic construct] gi|61367811|gb|AAX43050.1| deoxycytidine kinase [synthetic construct] Length = 261 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|33304131|gb|AAQ02573.1| deoxycytidine kinase [synthetic construct] Length = 261 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|33357874|pdb|1P5Z|B Chain B, Structure Of Human Dck Complexed With Cytarabine And Adp-Mg gi|33357875|pdb|1P60|A Chain A, Structure Of Human Dck Complexed With 2'-Deoxycytidine And Adp, Space Group C 2 2 21 gi|33357876|pdb|1P60|B Chain B, Structure Of Human Dck Complexed With 2'-Deoxycytidine And Adp, Space Group C 2 2 21 gi|33357877|pdb|1P61|B Chain B, Structure Of Human Dck Complexed With 2'-Deoxycytidine And Adp, P 43 21 2 Space Group gi|33357878|pdb|1P62|B Chain B, Structure Of Human Dck Complexed With Gemcitabine And Adp-Mg gi|88191995|pdb|2A7Q|A Chain A, Crystal Structure Of Human Dck Complexed With Clofarabine And Adp Length = 263 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 27 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 84 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 85 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 144 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 145 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 204 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 205 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 260 >gi|4503269|ref|NP_000779.1| deoxycytidine kinase [Homo sapiens] gi|118447|sp|P27707|DCK_HUMAN RecName: Full=Deoxycytidine kinase; Short=dCK gi|181510|gb|AAA35752.1| deoxycytidine kinase [Homo sapiens] gi|49168538|emb|CAG38764.1| DCK [Homo sapiens] gi|49456707|emb|CAG46674.1| DCK [Homo sapiens] gi|74355077|gb|AAI03765.1| Deoxycytidine kinase [Homo sapiens] gi|92058715|gb|AAI14618.1| Deoxycytidine kinase [Homo sapiens] gi|119626042|gb|EAX05637.1| deoxycytidine kinase [Homo sapiens] gi|189069271|dbj|BAG36303.1| unnamed protein product [Homo sapiens] gi|331271627|gb|AED02503.1| deoxynucleoside kinase [Homo sapiens] Length = 260 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|225711142|gb|ACO11417.1| Deoxynucleoside kinase [Caligus rogercresseyi] Length = 257 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 30/215 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG GAGKTT + +K F V EP ++ LL + + Sbjct: 36 IVVEGNIGAGKTTFLQNIKDFSPPDLIHVI--DEPVLEWKTYKGKYDLLDMMYE--DPKK 91 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSL 120 + +F + + + I L +R L S A + L L Sbjct: 92 WSFLFQVQVQLSMMKKYKAPVEAP-IRLMERSLLS--ARFCFVENLHNNGLLNDVELHML 148 Query: 121 QEISVQEVM-------PDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHE 171 ++ + D + L ++ +R+ ++R +S L++F R +HE Sbjct: 149 NDLYNFTIEHECFVCSTDLIVYLRTSPEVAYERMLSRSRSEAEKSLSLEHF-RNIHDLHE 207 Query: 172 K--RRQI-FLDIARNQPDRCHIVDSAHSFQSVATN 203 R+ F + P ++D + + Sbjct: 208 DWLVRKTKFQPL----PCPVVVIDGDKGAEELRAE 238 >gi|195392389|ref|XP_002054840.1| GJ22572 [Drosophila virilis] gi|194152926|gb|EDW68360.1| GJ22572 [Drosophila virilis] Length = 252 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 78/207 (37%), Gaps = 32/207 (15%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT ++ Q+ + DV + EP ++L + A Sbjct: 25 IEGNIGSGKTTFLN----HFQKYDKDVCLITEPVEKWRNVNGVNLL---EKMYKDPQKWA 77 Query: 69 IVFAAARLDHVENVIRPALMEG------KILLCDRFLDSS---YAYQGERDSSQHLFL-D 118 + F + V L K+ + +R + SS + R+ S L + + Sbjct: 78 MPFQSY-------VTLTMLQAHTAPTSKKLKIIERSIYSSRYCFVENMFRNGSLELGMYN 130 Query: 119 SLQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +LQE V D I L ++ +R++ R ES + ++ +HE Sbjct: 131 TLQEWYKFIEESIHVQSDLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHE-- 188 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSV 200 + R Q + ++++ + +++ Sbjct: 189 -DWLIHHRRPQQSKVLVLNADLNLENI 214 >gi|77411563|ref|ZP_00787906.1| deoxynucleoside kinase family protein [Streptococcus agalactiae CJB111] gi|77162417|gb|EAO73385.1| deoxynucleoside kinase family protein [Streptococcus agalactiae CJB111] Length = 213 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L + L DV +L + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPQK 48 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117 A + F R I+ A +L DR + + Y+ + L + Sbjct: 49 YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103 Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L+E+ + + PD + +D+ D L+R+ R E + + + Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160 Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214 ++ + + N P +D + + + ++L+ + +QK Sbjct: 161 KQVHSKYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209 >gi|229542246|ref|ZP_04431306.1| deoxynucleoside kinase [Bacillus coagulans 36D1] gi|229326666|gb|EEN92341.1| deoxynucleoside kinase [Bacillus coagulans 36D1] Length = 212 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 24/190 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G GKT+ + + + V P +E+ + Sbjct: 6 FIAIEGPIGVGKTSLAKAISAYFSFELLKEIVDENPFLGKFY---------TNKEEWSFQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123 E + F R +E++ + + D + S + R + + + +I Sbjct: 57 TE-MFFLCNRYKQLEDLKQHRQPA----VADYHIFKSLIF--ARRTLKTDEFEKFSKIYD 109 Query: 124 --SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + P+ I L ++ LKR++ R E + + +K + + F+ Sbjct: 110 ILTADMPQPNVIIYLHASLETLLKRIEIRGRAFEKNMQETYLQKLSADYGR----FMSRF 165 Query: 182 RNQPDRCHIV 191 + ++ Sbjct: 166 EAEHPNIPVL 175 >gi|254516609|ref|ZP_05128668.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR5-3] gi|219675032|gb|EED31399.1| DNA polymerase III, epsilon subunit [gamma proteobacterium NOR5-3] Length = 232 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 16/159 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GKTT L + + + P E A Sbjct: 25 YIAVEGPIGVGKTTLTRRLAETFNHE----ILLEDADQNPFLERFYR------NRNEAAL 74 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 A + F R ++ + + L + + D FL D +A L+ Q+ Sbjct: 75 ATQLFFLFQRAQKMQELRQSELFSP-VRVAD-FLIEKDPLFARINLDSDEFELYEKVYQK 132 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 +++ PD I L D+ L R+ +R LR +D Sbjct: 133 LTIDAPRPDLVIYLQASTDVLLDRI-DRRGLRHEKSIDR 170 >gi|195144770|ref|XP_002013369.1| GL23445 [Drosophila persimilis] gi|194102312|gb|EDW24355.1| GL23445 [Drosophila persimilis] Length = 250 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 36/212 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66 EG G+GKTT+++ ++ ++ + EP ++L + ++ Sbjct: 25 IEGNIGSGKTTYLN----HFEKYRDEICLLTEPVEKWRNVNGVNLLERMYKEPKKWAMPF 80 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQE 122 ++ V H + K+ + +R + SS Y + S + ++LQE Sbjct: 81 QSYVTLTMLQAHTAPTDK------KLKIMERSIFSSRYCFVENMHRNGSLETGMYNTLQE 134 Query: 123 ISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER------KDVMIHE 171 V D I L ++ +R++ R ES + + +D +IH Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHEDWLIHN 194 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 +R Q + ++D+ + +++++ Sbjct: 195 RRNQA---------CKVLVLDADLTLENISSE 217 >gi|149033733|gb|EDL88529.1| deoxycytidine kinase [Rattus norvegicus] Length = 260 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 85/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R + + +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFIFQSYACLSRIRAQLASLNGRLRDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ + + + D + Q + D I L + L R+ R E Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYIRGRDEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F + + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNFEYL-QEVP--ILTLDVNEDFKDKHESLVEKVKEFL 257 >gi|195497812|ref|XP_002096259.1| GE25572 [Drosophila yakuba] gi|194182360|gb|EDW95971.1| GE25572 [Drosophila yakuba] Length = 250 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT+++ ++ D+ + EP ++L + + A Sbjct: 25 IEGNIGSGKTTYLN----HFEKYKNDICLLTEPVEKWRNVNGVNLL---ELMYKEPKKWA 77 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P K+ + +R + S+ Y + S + ++L+E Sbjct: 78 MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V D I L ++ +R+++R ES + ++ +HE Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAHERIRHRARSEESCVPLKYLQELHELHED-----W 190 Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200 I +P C ++D+ + +++ Sbjct: 191 LIHHRRPQSCKVLVLDADLNLENI 214 >gi|322487751|emb|CBZ22992.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 274 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 57/177 (32%), Gaps = 29/177 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG++G GKT L L T P E R G +E A A Sbjct: 70 IVVEGLDGTGKTLVTRTLAEKLSG---VAMSTPPPQFAAIRETFR------GQEEAVARA 120 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123 ++AA ++ + + ++ DR+ S+ A + D++ Sbjct: 121 ---FYSAANYIAAAGILEAS--QSSAVVVDRWWCSTCAMALANGCNYDSLPPRGDAVYRW 175 Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVM 168 PD +L + + +R + S ++ + R +++ Sbjct: 176 PADLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSQSEMRRVAMEAYRRTNML 232 >gi|289193001|ref|YP_003458942.1| signal recognition particle-docking protein FtsY [Methanocaldococcus sp. FS406-22] gi|288939451|gb|ADC70206.1| signal recognition particle-docking protein FtsY [Methanocaldococcus sp. FS406-22] Length = 400 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT I+ L L++K Y V + G T A A L G + Sbjct: 196 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNIGVKV 251 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A G ++L D R ++ ++ +++ V Sbjct: 252 IKHKQGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNINLMEEIKK-VV 301 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 302 RVTKPDLVIF 311 >gi|118389890|ref|XP_001027990.1| Deoxynucleoside kinase family protein [Tetrahymena thermophila] gi|89309760|gb|EAS07748.1| Deoxynucleoside kinase family protein [Tetrahymena thermophila SB210] Length = 257 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 86/240 (35%), Gaps = 37/240 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP---AAEAARHVL--LS 56 ++ S EG G+GK+T + L++ ++ D V REP ++L Sbjct: 29 SNSKIFSVEGNIGSGKSTLLRLIQSLVE----DTQVVREPVNNWQAIDGNPQLNLLDAFY 84 Query: 57 CGVDEFGAEAEAIVFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 +G + + + H +P ++ + +L D+F+ +A G + + Sbjct: 85 QNPHRWGYTFQVYAYFSRLKQWHEIRREKPFVVCERSVLSDKFI---FALNGHKAGFFNE 141 Query: 116 FLDSLQEISVQEVMPDC--------TIILDLPVDIGLKRVQNRYSLRESA--CLDYFERK 165 +L ++ D I L + +I KR+Q R E L+Y Sbjct: 142 LEWALYNDYFNFLV-DKFHANQMDGIIYLHVQPEICYKRLQKRARDEEKDSISLEYL--- 197 Query: 166 DVMIHEKRRQIFLD----IARNQPDRCHIVDSAHSFQS---VATNILNIVWELVQKRVSP 218 IH++ + + P ++D F+ I++ + +Q+ S Sbjct: 198 -KDIHQRHEDWLITSKECLQEKIP--ILVIDGNTEFEQDGPKQREIISQITRFLQQNKSK 254 >gi|76787409|ref|YP_330443.1| deoxynucleoside kinase family protein [Streptococcus agalactiae A909] gi|77405673|ref|ZP_00782761.1| deoxynucleoside kinase family protein [Streptococcus agalactiae H36B] gi|76562466|gb|ABA45050.1| deoxynucleoside kinase family protein [Streptococcus agalactiae A909] gi|77175746|gb|EAO78527.1| deoxynucleoside kinase family protein [Streptococcus agalactiae H36B] Length = 213 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L + L DV +L + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117 A + F R I+ A +L DR + + Y+ + L + Sbjct: 49 YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103 Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L+E+ + + PD + +D+ D L+R+ R E + + + Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160 Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214 ++ + + N P +D + + + ++L+ + +QK Sbjct: 161 KQVHSKYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209 >gi|159042023|ref|YP_001541275.1| thymidylate kinase-like protein [Caldivirga maquilingensis IC-167] gi|157920858|gb|ABW02285.1| Thymidylate kinase-like protein [Caldivirga maquilingensis IC-167] Length = 211 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 16/171 (9%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------VLLSC 57 GL I G +G+GK+T L L R+ + V V+ G A VL C Sbjct: 2 GLIICLTGPDGSGKSTVARELALELSRRGFRVRVSWMRGSHTIASLIARFLSRFPVLRGC 61 Query: 58 GVDEFG--------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 G +G + F +A + PAL+ G +++ DR + + Sbjct: 62 GNPYYGVSIPGSLRPLWWFLEFISAIPIILLRYFLPALL-GYVVIGDRCVLDLVVWVSVT 120 Query: 110 DSSQHLFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 L + + + + + ++ R + LRE + Sbjct: 121 TGDSTFVKSILGKALISMAMKSSIIVYVTADYEVLRARRGADWGLREQLGM 171 >gi|115372758|ref|ZP_01460064.1| deoxyadenosine kinase [Stigmatella aurantiaca DW4/3-1] gi|115370239|gb|EAU69168.1| deoxyadenosine kinase [Stigmatella aurantiaca DW4/3-1] Length = 256 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 15/155 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G GKT+ +LL + V P + L F Sbjct: 45 RYIVVEGPIGVGKTSLSNLLAERFNARRVLEVVEENPFLSSF-------YLDRQKYAFQT 97 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + ++ +R + + + L + D +L D +A L+ + Sbjct: 98 QTFFLL---SRFRQQQELFQQDLFSSVTV-SD-YLFAKDRIFACLTLDSHELALYDRVFE 152 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 + + PD I L +D+ L R++ R E Sbjct: 153 ALGPRVTKPDLVIYLQARLDVLLHRIKKRGREFER 187 >gi|134104772|pdb|2JCS|A Chain A, Active Site Mutant Of Dnk From D. Melanogaster With Dttp Bound gi|134104773|pdb|2JCS|B Chain B, Active Site Mutant Of Dnk From D. Melanogaster With Dttp Bound Length = 230 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 81/204 (39%), Gaps = 26/204 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT+++ ++ D+ + +P ++L + + A Sbjct: 25 IEGNIGSGKTTYLN----HFEKYKNDICLLTDPVEKWRNVNGVNLL---ELMYKDPKKWA 77 Query: 69 IVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQEI 123 + F + L +++ P K+ + +R + S+ Y + S + ++L+E Sbjct: 78 MPFQSYVTLTMLQSHTAP--TNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEW 135 Query: 124 SVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V D I L ++ +R++ R ES + ++ +HE Sbjct: 136 YKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHED-----W 190 Query: 179 DIARNQPDRCH--IVDSAHSFQSV 200 I + +P C ++D+ + +++ Sbjct: 191 LIHQRRPQSCKVLVLDADLNLENI 214 >gi|125775239|ref|XP_001358871.1| GA18891 [Drosophila pseudoobscura pseudoobscura] gi|54638612|gb|EAL28014.1| GA18891 [Drosophila pseudoobscura pseudoobscura] Length = 250 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 36/212 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66 EG G+GKTT+++ ++ ++ + EP ++L + ++ Sbjct: 25 IEGNIGSGKTTYLN----HFEKYRDEICLLTEPVEKWRNVNGVNLLERMYKEPKKWAMPF 80 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAY---QGERDSSQHLFLDSLQE 122 ++ V H + K+ + +R + SS Y + S + ++LQE Sbjct: 81 QSYVTLTMLQAHTAPTDK------KLKIMERSIFSSRYCFVENMHRNGSLETGMYNTLQE 134 Query: 123 ISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER------KDVMIHE 171 V D I L ++ +R++ R ES + + +D +IH Sbjct: 135 WYKFIEESIHVQADLIIYLRTSPEVAHERIRQRARSEESCVPLKYLQELHELHEDWLIHN 194 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 +R Q + ++D+ + +++++ Sbjct: 195 RRNQA---------CKVLVLDADLTLENISSE 217 >gi|22537965|ref|NP_688816.1| deoxynucleoside kinase family protein [Streptococcus agalactiae 2603V/R] gi|76797872|ref|ZP_00780135.1| deoxynucleoside kinase family protein [Streptococcus agalactiae 18RS21] gi|77414262|ref|ZP_00790422.1| deoxynucleoside kinase family protein [Streptococcus agalactiae 515] gi|22534865|gb|AAN00689.1|AE014274_19 deoxynucleoside kinase family protein [Streptococcus agalactiae 2603V/R] gi|76586775|gb|EAO63270.1| deoxynucleoside kinase family protein [Streptococcus agalactiae 18RS21] gi|77159678|gb|EAO70829.1| deoxynucleoside kinase family protein [Streptococcus agalactiae 515] Length = 213 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L + L DV +L + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPQK 48 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117 A + F R I+ A +L DR + + Y+ + L + Sbjct: 49 YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103 Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L+E+ + + PD + +D+ D L+R+ R E + + + Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160 Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214 ++ + + N P +D + + + ++L+ + +QK Sbjct: 161 KQVHSEYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209 >gi|145490122|ref|XP_001431062.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398164|emb|CAK63664.1| unnamed protein product [Paramecium tetraurelia] Length = 226 Score = 54.3 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 46/229 (20%), Positives = 91/229 (39%), Gaps = 28/229 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEFG 63 IS EG G+GK+T + L +Q+K D+ EP LL +E Sbjct: 8 LISIEGNIGSGKSTLLRL----MQQKYPDLRFIAEPVNEWQSINGDPTLNLLGSFYEEPS 63 Query: 64 AEAEAIVFAAA--RLDHVENVIRPAL--MEGKILLCDRFLDS---SYAYQGERDS----S 112 A + A RL H + V+ L + +L +R +++ +A G ++ Sbjct: 64 RWAYTMQVYAFYSRLKHWKEVLSDPLNPEDRHCILSERSIEADKEIFAVNGHKNGMINKL 123 Query: 113 QHLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIH 170 + + E++ + I L + D+ R+Q R E ++ + IH Sbjct: 124 EFALYEKFYELALLMNCQ--MIIYLQVDPDVCFSRMQKRARDEEKNT---ISKEYLTQIH 178 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQS--VATN-ILNIVWELVQKRV 216 ++ + +L +Q +++ F+S V N + N + + +Q+ + Sbjct: 179 DR-HEEWLLRETHQNTSILVLNGDKEFESDLVQQNKMFNAIDQFLQELL 226 >gi|116623133|ref|YP_825289.1| hypothetical protein Acid_4039 [Candidatus Solibacter usitatus Ellin6076] gi|116226295|gb|ABJ85004.1| hypothetical protein Acid_4039 [Candidatus Solibacter usitatus Ellin6076] Length = 204 Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 56/153 (36%), Gaps = 26/153 (16%) Query: 3 SGLFISFEGIEG-----AGKTTHISLLKRFLQRKNYDVHVTREPGGTP---AAEAARHVL 54 G I+ EG G AGK L R +++N + + + AR + Sbjct: 8 KGRLIALEGSGGRPMAVAGK-----FLAREFRQRNVETGSSAWDASDIFFQIGQGARGL- 61 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +++A+ + IRPAL G ++ +++++ + G Sbjct: 62 -----PGASPRTLILLYASDLAFRLRWQIRPALEGGGTVIAAPYVETAIGF-GRAAGLPQ 115 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVD-IGLKR 146 +L + E + D T +P D + ++R Sbjct: 116 RWLRQIFEFAPAA---DGTF--RVPEDAVAMER 143 >gi|260665190|ref|ZP_05866039.1| deoxyadenosine kinase [Lactobacillus jensenii SJ-7A-US] gi|313472750|ref|ZP_07813238.1| deoxyadenosine kinase [Lactobacillus jensenii 1153] gi|239529275|gb|EEQ68276.1| deoxyadenosine kinase [Lactobacillus jensenii 1153] gi|260560927|gb|EEX26902.1| deoxyadenosine kinase [Lactobacillus jensenii SJ-7A-US] Length = 217 Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + V++ P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 52 Query: 67 EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115 + + I AL E ++ DR + D+ + A G D ++ + Sbjct: 53 FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 107 Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++D + + PD I +++ +D L R++ R E D ++ + Sbjct: 108 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDNMLSRIKRRGREFEQLETDPSLKE---YY 164 Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211 + R + N D+ + VD+ ++V I N + EL Sbjct: 165 ARLRNYYGPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 214 >gi|307136273|gb|ADN34101.1| uridylate kinase [Cucumis melo subsp. melo] Length = 209 Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 29/215 (13%), Positives = 67/215 (31%), Gaps = 47/215 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 29 GGPGSGKGTQCAYIVEHF---GF--------THFSAGDLLRGEIDSGSENGL-------- 69 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125 +I+ + EGKI+ + E ++ +D + Sbjct: 70 -----------MIKSMMNEGKIVPSE-VTVKLLQKAMEESGNEKFLIDGFPRNDENRAAF 117 Query: 126 Q---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179 + P + D P + +R+ NR R+ ++ ++ + + Q + Sbjct: 118 AAVTGIEPAFVLFFDCPEEEMERRILNRNQGRDDDNIETIRKRFKVFLQSSLPVVQYYES 177 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I + H +D+A + V ++ + + +K Sbjct: 178 I-----GKVHKIDAARPVEEVFESVKAVFTSINEK 207 >gi|25011906|ref|NP_736301.1| deoxynucleoside kinase family protein [Streptococcus agalactiae NEM316] gi|24413448|emb|CAD47526.1| Unknown [Streptococcus agalactiae NEM316] Length = 213 Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 45/232 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L + L DV +L + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117 A + F R I+ A +L DR + + Y+ + L + Sbjct: 49 YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNYKNGNVTKTELDI 103 Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L+E+ + + PD + +D+ D L+R+ R E + + + Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160 Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214 ++ + + N P +D + + + ++L+ + +QK Sbjct: 161 KQVHSEYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209 >gi|302766477|ref|XP_002966659.1| hypothetical protein SELMODRAFT_85389 [Selaginella moellendorffii] gi|300166079|gb|EFJ32686.1| hypothetical protein SELMODRAFT_85389 [Selaginella moellendorffii] Length = 199 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 47/231 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVD 60 I F G G GK T L + Y T + G+ + ++ + Sbjct: 1 IVFLGGPGCGKGTQCEELV---RDFGYSHLSTGDLLRAEVASGSELGKQCDTLMKEGKLV 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + A+ + K C RFL + +D Sbjct: 58 PLDVTINLL--------------KQAMGKAK---CKRFLIDGF----------PRAVDQA 90 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD------YFERKDVMIHEKRR 174 E + PD + LD +++ KR+ R A + FE + + Sbjct: 91 HEFEAKVGKPDVVLCLDCSLELMEKRLLQRGKASGRADDNIETIKKRFETF-LAESKPVI 149 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP-LSSKKD 224 + ++ P + + V ++ + V+K V P + +K D Sbjct: 150 DYYR---KSLPKAVKTIPTDKMPDEVYADVKTALKATVEKPVPPKVPAKAD 197 >gi|238855471|ref|ZP_04645781.1| deoxyadenosIne kinase [Lactobacillus jensenii 269-3] gi|282932161|ref|ZP_06337611.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1] gi|238831961|gb|EEQ24288.1| deoxyadenosIne kinase [Lactobacillus jensenii 269-3] gi|281303701|gb|EFA95853.1| deoxyadenosine kinase [Lactobacillus jensenii 208-1] Length = 216 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 81/230 (35%), Gaps = 45/230 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + V++ P +L + Sbjct: 4 IVLSGPIGAGKSSLTSILAEHLGSNAFYEDVSKNP------------VLPLYYKDMKRYT 51 Query: 67 EAI---VFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSSY----AYQGERDSSQ-HL 115 + + I AL E ++ DR + D+ + A G D ++ + Sbjct: 52 FLLNTYLLNKRLAQ-----INEALSENNPNVVLDRSIYEDALFFKMNADSGIADPTECDI 106 Query: 116 FLDSLQEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++D + + PD I +++ +D L R++ R E D ++ + Sbjct: 107 YVDLVHNMMEDVPGNPHKKPDLLIYINVSLDNMLSRIKRRGREFEQLETDPSLKE---YY 163 Query: 171 EKRRQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211 + R + N D+ + VD+ ++V I N + EL Sbjct: 164 ARLRNYYGPWYENYSESPKMVIDGDKYNFVDNEDDRKAVLELIDNKLKEL 213 >gi|256809975|ref|YP_003127344.1| signal recognition particle-docking protein FtsY [Methanocaldococcus fervens AG86] gi|256793175|gb|ACV23844.1| signal recognition particle-docking protein FtsY [Methanocaldococcus fervens AG86] Length = 397 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT I+ L L++K Y V + G T A A L G + Sbjct: 193 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNIGVKV 248 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A G ++L D R ++ ++ +++ V Sbjct: 249 IKHKQGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNTNLMEEIKK-VV 298 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 299 RVTKPDLVIF 308 >gi|126663146|ref|ZP_01734144.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Flavobacteria bacterium BAL38] gi|126624804|gb|EAZ95494.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Flavobacteria bacterium BAL38] Length = 400 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 29/205 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKTT + + K + + R + + E Sbjct: 202 YIAIEGNIGAGKTTLSTKIAEDCNAK---LVLERFADNPFLPKFYKDQSRYAFPLEMS-- 256 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-----DSL 120 F A R + + + + ++ D + S + L D + Sbjct: 257 -----FLADRYQQLSDDLAQFDLFKDFVVADYHIFKSLIFAKVTLQEDEFRLYKTMFDII 311 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLD 179 + + PD + L + L+ ++ R +E++ EK +LD Sbjct: 312 HK---EMPKPDLYVYLYQNTERLLENIKKRGRS--------YEQEIPADYLEKINHGYLD 360 Query: 180 IARNQPD-RCHIVDSAHSFQSVATN 203 + Q D I+D + V Sbjct: 361 YIKTQTDLNVLIIDVS-DLDFVKKQ 384 >gi|297673690|ref|XP_002814884.1| PREDICTED: deoxycytidine kinase-like [Pongo abelii] Length = 260 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 85/241 (35%), Gaps = 42/241 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ------------------RKNYDVHVTREPGGTPAAE 48 IS EG AGK+T +++LK+ + + ++ T + G + Sbjct: 24 ISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVAKWCNVQSTQNKFEELTTSQKNGGNVLQ 83 Query: 49 AARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSS 102 F + A + + R +++ +P L + + DR++ +S Sbjct: 84 MMYE---KPERWSFTFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFAS 139 Query: 103 YAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 140 NLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQG 199 Query: 158 -CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 L+Y E+ + ++H + F D + P +D F+ +++ V E Sbjct: 200 IPLEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEF 256 Query: 212 V 212 + Sbjct: 257 L 257 >gi|167563977|ref|ZP_02356893.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia oklahomensis EO147] Length = 227 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E A Sbjct: 18 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + I A ++ D F+ + +A D L+ Sbjct: 71 Q----LAFALQRERQAREIAAAYEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFARIQKRGQPMELQIGDAY 166 >gi|322505516|emb|CAM42947.2| putative RNA guanylyltransferase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 688 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 51/211 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + + + G P AE R V + FG EA+ Sbjct: 144 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVERAV-----KENFGPEAK--- 195 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++L DRF+ + + +L + Q +P Sbjct: 196 ---NRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--ARQLPVP 230 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDIARNQPDRC- 188 L + GL+R Q+R + A + E++ +IA + + Sbjct: 231 -IVFWLQVDPKEGLRRAQSRGDQKAGADHWRYVEQRAQA----------EIADHVYKKIG 279 Query: 189 --HIVDSAHSFQS--VATNILNIVWELVQKR 215 HI+D ++ V I +I+ L KR Sbjct: 280 VLHIIDCNM-LEARRVGDRIYSIIDGLFPKR 309 >gi|156387504|ref|XP_001634243.1| predicted protein [Nematostella vectensis] gi|156221324|gb|EDO42180.1| predicted protein [Nematostella vectensis] Length = 200 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 24/186 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +S I EG G GKTT L R L NY + + EP A Sbjct: 12 SSAKVIILEGNIGVGKTTLACQLARKL---NYKLFL--EPTNKNPYLAR----FYEDPKR 62 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER---DSSQHLFLD 118 + + + +F R L G+ +L DR + S + + Sbjct: 63 YALKMQIWLF-RQRFRMYSKATSHVLTTGQGVLLDRSVFSDCVFADVNYKEGTISEEGYK 121 Query: 119 SLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 E+ + + P + +D ++ +R+ R ES + + Sbjct: 122 YYNELKTKALKSVPPPHVMLFVDASPEVCFERIHGRGRDYESGIP-------LSYLKALH 174 Query: 175 QIFLDI 180 + + ++ Sbjct: 175 KAYRNM 180 >gi|154343127|ref|XP_001567509.1| RNA guanylyltransferase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 688 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 51/211 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + + + G P AE R V + FG EA+ Sbjct: 144 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVERAV-----KENFGPEAK--- 195 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++L DRF+ + + +L + Q +P Sbjct: 196 ---NRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--ARQLPVP 230 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFLDIARNQPDRC- 188 L + GL+R Q+R + A + E++ +IA + + Sbjct: 231 -IVFWLQVDPKEGLRRAQSRGDQKAGADHWRYVEQRAQA----------EIADHVYKKIG 279 Query: 189 --HIVDSAHSFQS--VATNILNIVWELVQKR 215 HI+D ++ V I +I+ L KR Sbjct: 280 VLHIIDCNM-LEARRVGDRIYSIIDGLFPKR 309 >gi|114594358|ref|XP_517245.2| PREDICTED: deoxycytidine kinase [Pan troglodytes] Length = 260 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 142 YESECMNEIEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPETCLHRMYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|322501791|emb|CBZ36873.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 1104 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 70/209 (33%), Gaps = 47/209 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + + + G P AE + V + FG +A+ Sbjct: 560 GCRGSGKTTQAENIAERYHLLHLSSGDMYKEGKQPFAEVEQAV-----KNNFGPDAK--- 611 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++L DRF+ + + +L Q +P Sbjct: 612 ---DRSY------------NGLVL-DRFV-------ATGEMDAYYLQAALN--VCQLPVP 646 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKRRQIFLDIARNQPDRC 188 L + GL+R Q+R + + + +R I ++ + I Sbjct: 647 -LVFWLQVDPKEGLRRAQSRGDQKAGSDHWRYVEQRAQAEIADRV---YKKI-----GVL 697 Query: 189 HIVDSAHSFQS--VATNILNIVWELVQKR 215 H++D ++ V I +I+ L KR Sbjct: 698 HVIDCNA-LEARRVGDRIYSIIDGLFPKR 725 >gi|225869384|ref|YP_002745332.1| deoxynucleoside kinase protein [Streptococcus equi subsp. zooepidemicus] gi|225702660|emb|CAX00746.1| deoxynucleoside kinase protein [Streptococcus equi subsp. zooepidemicus] Length = 213 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 51/234 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L +V P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117 + A + L+ I+ A +L DR + + Y+ + L + Sbjct: 47 KKYAFLLQIFFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQ 105 Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167 + L+E+ + + PD I +D+ + L+R++ R FE+ D Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFEKMLERIEKRGR--------RFEQVDDNPDLE 157 Query: 168 MIHEKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + + + P +D + + +AT +L+++ E ++ Sbjct: 158 AYYHQVHGEYPSWYEQYDVSPK--MKIDGNKLDFVQNPEDLAT-VLHMIDEKLK 208 >gi|239618036|ref|YP_002941358.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1] gi|239506867|gb|ACR80354.1| deoxynucleoside kinase [Kosmotoga olearia TBF 19.5.1] Length = 205 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 60/162 (37%), Gaps = 16/162 (9%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G +++ EG+ G GKTT + L + V P + E ++ + Sbjct: 6 RGKYVAIEGVIGVGKTTLVRYLSQEYALPPVLEVVEENPFLSKFYE---------DMERW 56 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119 + + + F +R D E + + L G + D ++ D +A + L+ Sbjct: 57 AFQTQ-LFFLVSRFDQQEKL-KKTLQMGMGAVSD-YIFDKDRLFASLTLKGEHLGLYERI 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + PD + L +D+ ++R+ R E +D Sbjct: 114 FGLLKSHTPTPDLVVYLYADIDVLMERIALRDRPFE-RSMDR 154 >gi|163786479|ref|ZP_02180927.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Flavobacteriales bacterium ALC-1] gi|159878339|gb|EDP72395.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Flavobacteriales bacterium ALC-1] Length = 375 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 58/190 (30%), Gaps = 20/190 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKT+ + + + K P + A Sbjct: 181 FIAIEGNIGAGKTSLANKIAQDFNAKLILERFADNPFLPKFYKEPERY----------AF 230 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123 + F A R + + + + ++ D + S + L ++ Sbjct: 231 TLEMSFLADRYQQISDDLSQLDLFKDFMVSDYDVHKSLVFSKVTLPEDEFRLYRKLFYQV 290 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 PD + L + ++ R ES D EK +L+ ++ Sbjct: 291 YKDIARPDLYVYLYQNTERLQANIKKRGRKYESEIED-------EYLEKINSGYLEFLKS 343 Query: 184 QPD-RCHIVD 192 Q + I+D Sbjct: 344 QTELNVKIID 353 >gi|257899982|ref|ZP_05679635.1| deoxyguanosine kinase [Enterococcus faecium Com15] gi|293572919|ref|ZP_06683869.1| deoxyguanosIne kinase [Enterococcus faecium E980] gi|257837894|gb|EEV62968.1| deoxyguanosine kinase [Enterococcus faecium Com15] gi|291607047|gb|EFF36419.1| deoxyguanosIne kinase [Enterococcus faecium E980] Length = 235 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L + L+ K P + L +++ + Sbjct: 9 GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119 L I+ A +L DR + DS + + L Sbjct: 60 RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+EIS Q+ PD + + + + L R++ R E D + +++ + + + Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169 Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224 P ++D + VA + + ++ R ++ + D Sbjct: 170 WYEQFDICPK--IVIDGDK-YDFVADPACGEQIVQEIKMRAKKMTEEAD 215 >gi|261402774|ref|YP_003246998.1| signal recognition particle-docking protein FtsY [Methanocaldococcus vulcanius M7] gi|261369767|gb|ACX72516.1| signal recognition particle-docking protein FtsY [Methanocaldococcus vulcanius M7] Length = 377 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT I+ L L++K Y V + G T A A L G + Sbjct: 173 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNIGVKV 228 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A G ++L D R ++ ++ +++ V Sbjct: 229 IKHKQGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNANLMEEIKK-VV 278 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 279 RVTKPDLVIF 288 >gi|215488312|ref|YP_002330743.1| conserved predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli O127:H6 str. E2348/69] gi|312968682|ref|ZP_07782891.1| uncharacterized ATP-binding protein yghT [Escherichia coli 2362-75] gi|215266384|emb|CAS10821.1| conserved predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli O127:H6 str. E2348/69] gi|312286900|gb|EFR14811.1| uncharacterized ATP-binding protein yghT [Escherichia coli 2362-75] Length = 230 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 73/238 (30%), Gaps = 46/238 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKIAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQEQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + F+ L ++ PD I L++ +D+ R + Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLDVACAR----KPDHKRE 181 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L+ + I + + +D+ + V + + + + R Sbjct: 182 SLER----KIAITPQLTFGGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|170051215|ref|XP_001861664.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Culex quinquefasciatus] gi|167872541|gb|EDS35924.1| NADH-ubiquinone oxidoreductase 42 kda subunit [Culex quinquefasciatus] Length = 404 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 51/178 (28%), Gaps = 25/178 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----------- 53 + +G AGK+ L L K + R + Sbjct: 83 KVVVVDGPIAAGKSAFAKELAGELDMKYFPEATMDSYYINSYGYDLRKLDPQMPPNMQSF 142 Query: 54 -----LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105 L + R + + G+ ++ DR + S + Sbjct: 143 DVAKFLQDPKHRNVA--TFQLRMLIQRYSQYIDALAHLFSTGEGVVLDRSVYSDMVFVEA 200 Query: 106 ----QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 ++ ++ + ++ + + P I LD+PV+I R++ R S E Sbjct: 201 MYKNGFLSKGARSVYYELVKNTFAELMKPHLVIYLDVPVNIVKDRIKKRASPAEVNSP 258 >gi|216263909|ref|ZP_03435903.1| deoxyguanosine/deoxyadenosine kinase [Borrelia afzelii ACA-1] gi|215979953|gb|EEC20775.1| deoxyguanosine/deoxyadenosine kinase [Borrelia afzelii ACA-1] Length = 201 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 21/167 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I EG+ G GKTT ++L + L+ V E F Sbjct: 1 MVIVIEGLIGVGKTTLGNILSKELK-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPV 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFL 117 + I F R ++ V R +G + DR + + D +++ Sbjct: 56 Q---INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYI 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 D L + P I LD +D +R++NR E DY E Sbjct: 108 DLLDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 154 >gi|321474424|gb|EFX85389.1| hypothetical protein DAPPUDRAFT_230557 [Daphnia pulex] Length = 192 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 59/214 (27%), Gaps = 49/214 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + Q VH+ A + R E A E Sbjct: 13 GGPGAGKGTQCAKIVEKFQY----VHL-------SAGDLLRE----ERNTEGSAYGEL-- 55 Query: 71 FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125 I + G I+ + S A ++ + +D + ++ Sbjct: 56 ------------IESHIRNGTIVPVEI----TCSLLATAMKKSGNNKFLIDGFPRNKDNL 99 Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 M D T + D + ++R R + D E + Sbjct: 100 DGWQKEMGDKTNVQFVLFFDCSQEACMERCLQRGAAGSGRSDDNEESLKKRFQTYVKDT- 158 Query: 178 LDIARNQP--DRCHIVDSAHSFQSVATNILNIVW 209 + I + +D++ S V ++ Sbjct: 159 MAIIEHYDALGLVRKIDASQSPDQVFEDVTKAFE 192 >gi|163753143|ref|ZP_02160267.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Kordia algicida OT-1] gi|161326875|gb|EDP98200.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Kordia algicida OT-1] Length = 377 Score = 53.9 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 44/215 (20%), Positives = 75/215 (34%), Gaps = 28/215 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ + + K P E F E Sbjct: 182 YIAIEGNIGAGKTSLATKIAEDFNGKLILERFADNPFLPKFYE-------DNSRYAFPLE 234 Query: 66 AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123 F A R + +++ + L + I+ D + S + ++ L L +I Sbjct: 235 MS---FLADRYQQISDDLAQLDLFKDFIV-SDYDVVKSLIFAKVTLQNEEYKLYRKLFDI 290 Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +E+ PD I L + LK ++ R DY ++ EK +L+ R Sbjct: 291 MYKEIPKPDLYIYLYQNTERLLKNIKKRGR-------DYEQKIPSEYLEKINNGYLEFIR 343 Query: 183 NQPD-RCHIVDSAHSFQSVA-----TNILNIVWEL 211 D I+D + VA I++ + E Sbjct: 344 THKDLNVKIIDVS-DLDFVANANDYQKIISEIHEA 377 >gi|69244427|ref|ZP_00602843.1| Deoxyguanosine kinase [Enterococcus faecium DO] gi|257879066|ref|ZP_05658719.1| deoxyguanosine kinase [Enterococcus faecium 1,230,933] gi|257881691|ref|ZP_05661344.1| deoxyguanosine kinase [Enterococcus faecium 1,231,502] gi|257886322|ref|ZP_05665975.1| deoxyguanosine kinase [Enterococcus faecium 1,231,501] gi|257890920|ref|ZP_05670573.1| deoxyguanosine kinase [Enterococcus faecium 1,231,410] gi|260558590|ref|ZP_05830786.1| deoxyguanosine kinase [Enterococcus faecium C68] gi|261206752|ref|ZP_05921443.1| deoxyguanosine kinase [Enterococcus faecium TC 6] gi|289566434|ref|ZP_06446860.1| deoxyguanosine kinase [Enterococcus faecium D344SRF] gi|293557078|ref|ZP_06675637.1| deoxyguanosIne kinase [Enterococcus faecium E1039] gi|293559538|ref|ZP_06676073.1| deoxyguanosIne kinase [Enterococcus faecium E1162] gi|293570132|ref|ZP_06681211.1| deoxyguanosIne kinase (dguo kinase) (dgk)(deoxynucleoside kinase complex i f-component) [Enterococcus faecium E1071] gi|294615258|ref|ZP_06695137.1| deoxyguanosIne kinase [Enterococcus faecium E1636] gi|294619535|ref|ZP_06698972.1| deoxyguanosine kinase [Enterococcus faecium E1679] gi|294623330|ref|ZP_06702191.1| deoxyguanosIne kinase [Enterococcus faecium U0317] gi|68196368|gb|EAN10796.1| Deoxyguanosine kinase [Enterococcus faecium DO] gi|257813294|gb|EEV42052.1| deoxyguanosine kinase [Enterococcus faecium 1,230,933] gi|257817349|gb|EEV44677.1| deoxyguanosine kinase [Enterococcus faecium 1,231,502] gi|257822178|gb|EEV49308.1| deoxyguanosine kinase [Enterococcus faecium 1,231,501] gi|257827280|gb|EEV53906.1| deoxyguanosine kinase [Enterococcus faecium 1,231,410] gi|260075764|gb|EEW64070.1| deoxyguanosine kinase [Enterococcus faecium C68] gi|260078882|gb|EEW66582.1| deoxyguanosine kinase [Enterococcus faecium TC 6] gi|289161755|gb|EFD09629.1| deoxyguanosine kinase [Enterococcus faecium D344SRF] gi|291587331|gb|EFF19216.1| deoxyguanosIne kinase (dguo kinase) (dgk)(deoxynucleoside kinase complex i f-component) [Enterococcus faecium E1071] gi|291591897|gb|EFF23527.1| deoxyguanosIne kinase [Enterococcus faecium E1636] gi|291594226|gb|EFF25663.1| deoxyguanosine kinase [Enterococcus faecium E1679] gi|291597265|gb|EFF28455.1| deoxyguanosIne kinase [Enterococcus faecium U0317] gi|291600766|gb|EFF31059.1| deoxyguanosIne kinase [Enterococcus faecium E1039] gi|291606490|gb|EFF35889.1| deoxyguanosIne kinase [Enterococcus faecium E1162] Length = 235 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L + L+ K P + L +++ + Sbjct: 9 GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119 L I+ A +L DR + DS + + L Sbjct: 60 RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+EIS Q+ PD + + + + L R++ R E D + +++ + + + Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169 Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224 P ++D + VA + + ++ R ++ + D Sbjct: 170 WYEQFDICPK--IVIDGDK-YDFVADPACGEQIVQEIKMRAKKMTEEAD 215 >gi|258615297|ref|ZP_05713067.1| deoxyguanosine kinase [Enterococcus faecium DO] gi|314939639|ref|ZP_07846864.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04] gi|314943994|ref|ZP_07850695.1| deoxynucleoside kinase [Enterococcus faecium TX0133C] gi|314948598|ref|ZP_07851974.1| deoxynucleoside kinase [Enterococcus faecium TX0082] gi|314953880|ref|ZP_07856743.1| deoxynucleoside kinase [Enterococcus faecium TX0133A] gi|314993527|ref|ZP_07858883.1| deoxynucleoside kinase [Enterococcus faecium TX0133B] gi|314995548|ref|ZP_07860645.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01] gi|313590242|gb|EFR69087.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01] gi|313591964|gb|EFR70809.1| deoxynucleoside kinase [Enterococcus faecium TX0133B] gi|313594215|gb|EFR73060.1| deoxynucleoside kinase [Enterococcus faecium TX0133A] gi|313597418|gb|EFR76263.1| deoxynucleoside kinase [Enterococcus faecium TX0133C] gi|313641048|gb|EFS05628.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04] gi|313644975|gb|EFS09555.1| deoxynucleoside kinase [Enterococcus faecium TX0082] Length = 239 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L + L+ K P + L +++ + Sbjct: 13 GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 63 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119 L I+ A +L DR + DS + + L Sbjct: 64 RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+EIS Q+ PD + + + + L R++ R E D + +++ + + + Sbjct: 118 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 173 Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224 P ++D + VA + + ++ R ++ + D Sbjct: 174 WYEQFDICPK--IVIDGDK-YDFVADPACGEQIVQEIKMRAKKMTEEAD 219 >gi|315271314|gb|ACO47182.2| putative Deoxyguanosine kinase (Deoxynucleoside kinase complex I F-component) [Deinococcus deserti VCD115] Length = 203 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/156 (21%), Positives = 57/156 (36%), Gaps = 15/156 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKT+ L + V P E D + Sbjct: 1 MYVVVEGPIGVGKTSLAGRLAARYGAELNLEIVEENPFLARFYEQ---------PDAYSF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + F +R + + +P L G ++ D +L D +A +D+ HL+ D Sbjct: 52 QVQVF-FLLSRFKQLSALSQPGLFSGN-VVSD-YLFDKDFIFAAMNLKDAEFHLYEDLYA 108 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 +S + PD I L D L+R+ R E Sbjct: 109 HLSPRLPTPDLVIYLRADTDELLRRIARRGRPFERD 144 >gi|294155668|ref|YP_003560052.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145] gi|291600306|gb|ADE19802.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145] Length = 219 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 78/226 (34%), Gaps = 26/226 (11%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60 + I GI G +GK+ L ++ + V + L + Sbjct: 1 MLI---GISGMISSGKSVLSKKLNKYYAK---SVMLKEFEEDDEVFNTFLKWLYEKRPNL 54 Query: 61 EFGAEAEAI-VFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQG----ERDSSQH 114 G ++ + + + + + + + + + DRF Y + + Sbjct: 55 TIGFQSYVVENHTTKLSELLNDYKKNSKDWKHEHIFLDRFSIEHYIFAHVNLEAKGKKYL 114 Query: 115 LFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 D+L ++ Q+ P+ I LD+ + KR+ +R E FE + K Sbjct: 115 DGYDALFSKLITQDETPNLAIYLDMTFETFKKRLFSRGRSVEVNN---FEA-NYEYFYKL 170 Query: 174 RQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQK 214 ++ D+ A I+++ + Q V + ++ + V+K Sbjct: 171 YSVYKDLFIKQAAKYNLNYVIINTDDLNEQEVFKKAIEVIDKFVEK 216 >gi|254447133|ref|ZP_05060600.1| deoxyguanosine kinase [gamma proteobacterium HTCC5015] gi|198263272|gb|EDY87550.1| deoxyguanosine kinase [gamma proteobacterium HTCC5015] Length = 214 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 53/164 (32%), Gaps = 31/164 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKR------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 +I EG GAGKT+ L L+ + + + + Sbjct: 6 KYIVVEGPIGAGKTSLAKRLAHSYGSELLLEAASENPFLEKFY----------------Q 49 Query: 59 VDEFGAEAEAIVFAAARLDHVENV-----IRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + A A + F R V+ + P + ++ DR +A Sbjct: 50 NPKQHALATQMFFLMQRAGQVQELRQSDLFEPVRVADFLIEKDR----LFAELILDADEL 105 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 L+ + +++ PD I L PVD+ +R+ R E Sbjct: 106 KLYQQMYRHLTLDMPPPDLVIYLQAPVDVLQQRIARRGIAMEQG 149 >gi|289739929|gb|ADD18712.1| NADH-ubiquinone oxidoreductase NDUFA10/42kDa subunit [Glossina morsitans morsitans] Length = 397 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 69/231 (29%), Gaps = 34/231 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC------- 57 I EG AGK+ L L+ R LL Sbjct: 72 KLICVEGPIAAGKSKLAKELAAELEMLYVPEANMDMYYINSYGYDMR--LLDPQMPESCR 129 Query: 58 ---------GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-- 106 + F A + I R + + + L G+ ++ DR S + + Sbjct: 130 SFDVPKFCKDPNHFLAASFQIKMYMLRYNQYIDALAHILSTGQGVVLDRCCYSDFVFMET 189 Query: 107 ----GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACL-- 159 G L++ ++ E + P I LD+PV +++ R E Sbjct: 190 MHKHGYISKGARSVYHELRQNTIYEVLRPHLVIYLDVPVQGVKDKIKARNIDYEINSKVF 249 Query: 160 -DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD--SAHSFQSVATNILNI 207 D + R ++ Q FL + I D + + V +I I Sbjct: 250 TDDYLRTMENFYK---QHFLKDISIHAE-LLIYDWTAGGETEVVVEDIERI 296 >gi|320158417|ref|YP_004190795.1| hypothetical protein VVM_01190 [Vibrio vulnificus MO6-24/O] gi|319933729|gb|ADV88592.1| hypothetical protein VVMO6_03570 [Vibrio vulnificus MO6-24/O] Length = 203 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 65/173 (37%), Gaps = 30/173 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 + I+ EG GAGK+T + LL + L + + D T ++S G Sbjct: 1 MLITLEGNIGAGKSTLLPLLAKELGFQHADESVDNDSMFTS--------------IMSSG 46 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + A ++ V G L+ +R SS + +S L+ Sbjct: 47 TSEQINMYMSHKLAERNIECVRKG-------GDWLV-ERCPSSSLLFGMAAGNSDEA-LN 97 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIH 170 + ++ P + + P+++ L+R++ R E D F RK +H Sbjct: 98 VIYRDVIRAPEPQLHVYVRTPLNVCLRRMRKRGRPAELEFYDKKFLRKLEAVH 150 >gi|255557951|ref|XP_002520004.1| Thermosensitive gluconokinase, putative [Ricinus communis] gi|223540768|gb|EEF42328.1| Thermosensitive gluconokinase, putative [Ricinus communis] Length = 189 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 66/205 (32%), Gaps = 31/205 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I G+ GAGK+T +L L+ D V E R + D Sbjct: 7 GKAIVIMGVSGAGKSTIGQMLAEELKCDFLDADVFH---SQSNKEKMRQGIPLSEEDRIP 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 L ++ +R +L G+ ++ SS Q L Sbjct: 64 W-----------LQSLQEALRESLTAGETIIL---GCSSLQNQYREILRSADPYYQLGSY 109 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++LD+ ++ ++R+ R + + + + + + Sbjct: 110 VSAVKF----VLLDVSAEVLVERLNKRAAEGKHFMPATLLQSQLEF----------LHID 155 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 + + VD+ S +++ I +I+ Sbjct: 156 DSEGIYKVDATQSPRAIVNVIKSII 180 >gi|156187009|gb|ABU55759.1| thymidylate kinase [Clover phyllody phytoplasma] Length = 76 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I FEG++G+GKT+ I+ L+ L+ + + G + + R++ L+ + Sbjct: 2 KLIVFEGLDGSGKTSLINSLQPQLKT---PHQLYQGLGSSSLGKEIRNLFLN--FQQVDY 56 Query: 65 EAEAIVFAAARLDHVENVIR 84 + + + Sbjct: 57 LTRFYLSLTNMTQIQAELFK 76 >gi|75337416|sp|Q9SMH5|DYHC2_CHLRE RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName: Full=Cytoplasmic dynein heavy chain 1b; Short=cDHC1b gi|50831331|emb|CAB56748.2| cytoplasmic dynein heavy chain 1b [Chlamydomonas reinhardtii] Length = 4334 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GK+T LL++ +R + P P R LL + Sbjct: 2029 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2081 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ ++ AAAR V++ L + ++CD +++SL Sbjct: 2082 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2123 Query: 123 I 123 + Sbjct: 2124 V 2124 >gi|303324853|pdb|3IPX|A Chain A, X-Ray Structure Of Human Deoxycytidine Kinase In Complex With Adp And An Inhibitor gi|303324854|pdb|3IPY|A Chain A, X-Ray Structure Of Human Deoxycytidine Kinase In Complex With An Inhibitor gi|303324855|pdb|3IPY|B Chain B, X-Ray Structure Of Human Deoxycytidine Kinase In Complex With An Inhibitor Length = 241 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 5 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 62 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 63 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 122 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 123 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 182 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 183 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 238 >gi|159476658|ref|XP_001696428.1| cytoplasmic dynein 1b heavy chain [Chlamydomonas reinhardtii] gi|158282653|gb|EDP08405.1| cytoplasmic dynein 1b heavy chain [Chlamydomonas reinhardtii] Length = 4333 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GK+T LL++ +R + P P R LL + Sbjct: 2029 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2081 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ ++ AAAR V++ L + ++CD +++SL Sbjct: 2082 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2123 Query: 123 I 123 + Sbjct: 2124 V 2124 >gi|114051347|ref|NP_001039509.1| UMP-CMP kinase [Bos taurus] gi|86826309|gb|AAI12479.1| Cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Bos taurus] gi|296488872|gb|DAA30985.1| UMP-CMP kinase [Bos taurus] Length = 228 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + +GKI+ L R +D + A +++ D+ Sbjct: 80 -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 187 YLQSTKPIIDLYEEMGKVRKIDASKSVDEVFDEVVKI 223 >gi|255565097|ref|XP_002523541.1| adenylate kinase, putative [Ricinus communis] gi|223537248|gb|EEF38880.1| adenylate kinase, putative [Ricinus communis] Length = 597 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 74/239 (30%), Gaps = 51/239 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T L+ + + D+ T + A+ + + + Sbjct: 81 ISGAPASGKGTQCELIVKKFGLVHISTGDILRAEVSAETDIGKKAKEFM---NAGQLVPD 137 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +RL + + L++G R SQ L+ L+ Sbjct: 138 EIVTAMVTSRLSRKDVKQKGWLLDGY----------------PRSLSQAESLEELK---- 177 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFERKDVMIHE 171 + PD I+LD+P +I ++R R + E Sbjct: 178 --IRPDIYIVLDVPDEILVERCVGRRLDPLTGKIYHITNFPPETEEIKARLITRPDDTQE 235 Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 K LDI + + +D + S V I +++ ++ + + P+ SK Sbjct: 236 KVNSR-LDIYKKNAEAILSTYLNIMKKIDGSRSKGVVFEEISSLLSQVQKDKEEPVKSK 293 >gi|150383501|sp|Q2KIW9|KCY_BOVIN RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK Length = 196 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 10 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + +GKI+ L R +D + A +++ D+ Sbjct: 48 -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 155 YLQSTKPIIDLYEEMGKVRKIDASKSVDEVFDEVVKI 191 >gi|324997956|ref|ZP_08119068.1| thymidylate kinase [Pseudonocardia sp. P1] Length = 104 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 18/113 (15%) Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 A + L+ L + + PD +++LD + G A + Sbjct: 1 VAAEQIGTGPDDGELEDLARWATGGLRPDVSVLLDRAPETG--------PEPGVAGAE-- 50 Query: 163 ERKDVMIHEKRRQIFLDIARNQ-PDRCHIVDSAHSFQSVATNILNIVWELVQK 214 H + +++ P R +VD+A + VA +L+ V L+ + Sbjct: 51 -------HARVQRLLARTVTAHGPQRSVVVDAAGTEDDVAARVLDGVLPLLPE 96 >gi|315150530|gb|EFT94546.1| shikimate kinase [Enterococcus faecalis TX0012] Length = 168 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 60/205 (29%), Gaps = 41/205 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGKTT L L+ + D L+ Sbjct: 4 IVLIGFMGAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYF 48 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E AA R E I L + +L G L+ Sbjct: 49 EKYGEAAFREQ--ETQILKELSKNTAVLST----------GGGIVVGLENRSLLKSFQQ- 95 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 I L + LKR++ + ++ ++ + + E R+ + + A+ Sbjct: 96 ------VIYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM--- 146 Query: 187 RCHIVDSA-HSFQSVATNILNIVWE 210 +D+ S + + IL + E Sbjct: 147 ---TIDTTNRSPEEIINEILQQLKE 168 >gi|307168981|gb|EFN61860.1| Adenylate kinase isoenzyme 1 [Camponotus floridanus] Length = 230 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 27/205 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGKTT + + + +TRE LL V + Sbjct: 39 GGPGAGKTTQSTRIAEHY---GFCTIITRE-------------LLRVEVATGSQRGVILA 82 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + + V + L++ R L S +G S + P Sbjct: 83 YLMSEGKLVPADVMVELIKA------RMLGSLETSRGFLLSGFPREKAQCKHFDEHIRPP 136 Query: 131 DCTIILDLPVDIGLKRVQNRY-SLRESACLDYFER-KDVMIHEKRRQIFLDIARNQPDRC 188 D + L + + + R+ R + E ++ E + + HEK + L R R Sbjct: 137 DLVLYLYVRESLLMDRILARTITATERQSRNFDENMQRIKDHEKMVKPILKYYRK---RL 193 Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213 ++D + +V I N + +++ Sbjct: 194 VVIDGENDETAVFEEICNAIDNVLE 218 >gi|297592152|gb|ADI46936.1| DHC1bm [Volvox carteri f. nagariensis] Length = 4350 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GK+T LL++ +R + P P R LL + Sbjct: 2038 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2090 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ ++ AAAR V++ L + ++CD +++SL Sbjct: 2091 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2132 Query: 123 I 123 + Sbjct: 2133 V 2133 >gi|190890720|ref|YP_001977262.1| hypothetical protein RHECIAT_CH0001099 [Rhizobium etli CIAT 652] gi|190695999|gb|ACE90084.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 195 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 61/207 (29%), Gaps = 43/207 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64 EG+ GAGKT + LQR+ Y V RE G E + Sbjct: 26 IEGVSGAGKT----AVAEELQRRGYHVIHGDRELAYRGDPSTGEPMVE----PAEESVAD 77 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A H+ +V + + ++ DR S + + F+D Sbjct: 78 RS-----AWVHAHHLWDVEKV-----RTMIVDR--RSLITFFCGGSRNLPRFVDWF---- 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 D LD+ +D +R+ R + + + + Sbjct: 122 ------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHAT----KEDV 166 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P + +D+ + IL E Sbjct: 167 PKQALRIDATAPLAVIVDEILAKCGEA 193 >gi|2497487|sp|Q29561|KCY_PIG RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK gi|893400|dbj|BAA06130.1| UMP-CMP kinase [Sus scrofa] gi|1096714|prf||2112267A UMP-CMP kinase Length = 196 Score = 53.5 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 10 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + +GKI+ L R +D + A +++ D+ Sbjct: 48 -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 154 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + +D++ S V ++ I Sbjct: 155 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 191 >gi|158317245|ref|YP_001509753.1| hypothetical protein Franean1_5492 [Frankia sp. EAN1pec] gi|158112650|gb|ABW14847.1| hypothetical protein Franean1_5492 [Frankia sp. EAN1pec] Length = 341 Score = 53.1 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 32/232 (13%), Positives = 71/232 (30%), Gaps = 36/232 (15%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ EG GAGK ++L++R + R LS + GA Sbjct: 95 LLAVEGPAGAGK---LALVRRLTAAPAALHLHLASQTDAVLRDLMRR--LSTLGEPLGAV 149 Query: 66 AEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +V AA ++ + L +++ DR++ + Y + + +I Sbjct: 150 PANLVHAARLIEAAVQFRYLEEFLAGFDLVVADRWIQTWEVY----CGDLGEYTEWYLQI 205 Query: 124 SVQEVMPDCTIILDLPVDI-----------GLK--------RVQNRYSLRESACLDYFER 164 + +PD + L + ++ G + SA Sbjct: 206 ASYVPVPDLVLYLRVSPEVAAARLARRASAGQATAGHGPAGQASAGQESGGSASAGRESA 265 Query: 165 KDVMIHEKRRQIFLDIARNQPDR-----CHIVDSAHSFQSVATNILNIVWEL 211 V R+ ++ + C ++D+ V + ++ + Sbjct: 266 GRVDEAAALREA-VEACARYDEVMSGVDCVVIDADAPAADVLAEVTGVLDAV 316 >gi|154413997|ref|XP_001580027.1| Adenylate kinase family protein [Trichomonas vaginalis G3] gi|121914240|gb|EAY19041.1| Adenylate kinase family protein [Trichomonas vaginalis G3] Length = 264 Score = 53.1 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 69/224 (30%), Gaps = 56/224 (25%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI G G+GK T + + G A E R E ++ Sbjct: 78 FII--GGPGSGKGTQSEKIIQDFNA-----------GYMSAGELLRK--------EAASD 116 Query: 66 AEAIVFAAARLDHVENVIRP-----------ALMEGKIL-LCDRFLDSSYAYQGERDSSQ 113 E A E I P L +GK + L D F Sbjct: 117 TELGHSIA--EQMKEGKILPQELVIGLLKKEILEQGKDVYLIDGF--------------- 159 Query: 114 HLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIH 170 +D L + + P I LD+P +I +R+ R RE + + + H Sbjct: 160 PRAMDQLNSFE-ETITPCSAVIYLDVPDEILTERLLKRAETSGREDDNEETIKLRLEAFH 218 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 LD + + + ++D + + V I + ++ K Sbjct: 219 T-VSAPVLDYYK-EKGKAIVIDGNRAPEEVYEEIKEKLNAVLNK 260 >gi|257888979|ref|ZP_05668632.1| deoxyguanosine kinase [Enterococcus faecium 1,141,733] gi|257825035|gb|EEV51965.1| deoxyguanosine kinase [Enterococcus faecium 1,141,733] Length = 235 Score = 53.1 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 40/229 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L + L+ K P + L +++ + Sbjct: 9 GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119 L I+ A +L DR + DS + + L Sbjct: 60 RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+EIS Q+ PD + + + + L R++ R E D + +++ + + + Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169 Query: 180 IARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPLSSKKD 224 P ++D + VA + + ++ R ++ + D Sbjct: 170 WYEQFDICPK--IVIDGDK-YDFVADPTCGEKIVQEIKMRAKKMTEEAD 215 >gi|302845981|ref|XP_002954528.1| cytoplasmic dynein 1b heavy chain [Volvox carteri f. nagariensis] gi|300260200|gb|EFJ44421.1| cytoplasmic dynein 1b heavy chain [Volvox carteri f. nagariensis] Length = 4346 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GK+T LL++ +R + P P R LL + Sbjct: 2040 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2092 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ ++ AAAR V++ L + ++CD +++SL Sbjct: 2093 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2134 Query: 123 I 123 + Sbjct: 2135 V 2135 >gi|203287696|ref|YP_002222711.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia recurrentis A1] gi|201084916|gb|ACH94490.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia recurrentis A1] Length = 206 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 61/172 (35%), Gaps = 20/172 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++GL I EG+ G KTT +L + ++ RE Sbjct: 1 MDAGLVIVIEGLIGVSKTTLGHIL-----SLDLEIPFYRELNNEFTLSMLNEFYKD-KFR 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQ 113 + + R +++V + +GK +L D + S + D+ Sbjct: 55 WAFPMQISFLNE--RFKLIKSVFK---SKGKGIL-DISIYSDCVFASFLNDNGYISDNEY 108 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164 ++LD L + P+ I LD + R++ R E+ DY E+ Sbjct: 109 KIYLDLLDNMLEHSKKPELMIYLDCSIAEAENRIKKRNRSCETDISKDYLEK 160 >gi|167825668|ref|ZP_02457139.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 9] gi|226194201|ref|ZP_03789800.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei Pakistan 9] gi|225933666|gb|EEH29654.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei Pakistan 9] Length = 229 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 19/163 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 20 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 72 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122 + + A + + I A ++ D Q + L Sbjct: 73 Q----LAFALQRERQAREIAAAHEANTPIVAD---FMPQKNQIFARLTLPDDEWQLYRSL 125 Query: 123 ---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 126 AAHLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 168 >gi|297592071|gb|ADI46856.1| DHC1bf [Volvox carteri f. nagariensis] Length = 4346 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GK+T LL++ +R + P P R LL + Sbjct: 2040 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 2092 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ ++ AAAR V++ L + ++CD +++SL Sbjct: 2093 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 2134 Query: 123 I 123 + Sbjct: 2135 V 2135 >gi|24114294|ref|NP_708804.1| hypothetical protein SF3033 [Shigella flexneri 2a str. 301] gi|30064341|ref|NP_838512.1| hypothetical protein S3234 [Shigella flexneri 2a str. 2457T] gi|24053451|gb|AAN44511.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042598|gb|AAP18322.1| hypothetical protein S3234 [Shigella flexneri 2a str. 2457T] gi|313648104|gb|EFS12550.1| uncharacterized ATP-binding protein yghT [Shigella flexneri 2a str. 2457T] Length = 230 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/240 (15%), Positives = 72/240 (30%), Gaps = 50/240 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G + +GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDASGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE 108 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGT 127 Query: 109 R---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRE 155 + F+ L ++ PD I L++ +++ R R SL Sbjct: 128 VFPPNVEGGRFVSWLASQERKAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLAR 185 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ + V + + + + R Sbjct: 186 KIAI----TPQLTF------GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 227 >gi|218514653|ref|ZP_03511493.1| hypothetical protein Retl8_13627 [Rhizobium etli 8C-3] Length = 177 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 62/207 (29%), Gaps = 43/207 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64 EG+ GAGKT + LQR+ Y V RE G E + Sbjct: 8 IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYRGDPSTGEPMVE----PAEESATD 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A H+ +V + + ++ DR S ++ + F+D Sbjct: 60 RS-----AWVHAHHIWDVEKV-----RTMIVDR--RSLISFFCGGSRNLPRFVDWF---- 103 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 D LD+ +D +R+ R + + + + Sbjct: 104 ------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHAT----KEDV 148 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P + +D+ + IL E Sbjct: 149 PKQALRIDATAPLAVIVDEILAKCGEA 175 >gi|327194847|gb|EGE61680.1| hypothetical protein RHECNPAF_100006 [Rhizobium etli CNPAF512] Length = 177 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 63/207 (30%), Gaps = 43/207 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64 EG+ GAGKT + LQR+ Y V RE G E + Sbjct: 8 IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYRGDPSTGEPMVE----PAEESATD 59 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A H+ +V + + ++ DR S ++ + F+D Sbjct: 60 RS-----AWVHAHHIWDVEKV-----RTMIVDR--RSLISFFCGGSRNLPRFVDWF---- 103 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 D LD+ +D +R+ R + + + DI Sbjct: 104 ------DAVFELDVDLDTLKRRLAARPEDEFGGRP-----AERALIMRLHATKEDI---- 148 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 P + +D+ + IL E Sbjct: 149 PKQALRIDATAPLAVIVDEILAKCGEA 175 >gi|186477242|ref|YP_001858712.1| deoxynucleoside kinase [Burkholderia phymatum STM815] gi|184193701|gb|ACC71666.1| deoxynucleoside kinase [Burkholderia phymatum STM815] Length = 231 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G GKT+ L + + P P E A Sbjct: 24 YLTIEGPIGVGKTSLARRLAQRWSMH----ELFERPQDNPFLERFYR------DTSRHAL 73 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + FA R + I G L+ D F+ + +A D L+ + Sbjct: 74 PTQLSFALQRAQQTQE-IAARRTAGTPLITD-FMTQKNDIFARLTLDDDEYQLYRALAAK 131 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 132 LDTPGPSPDLIVYLQASPEVLFSRIQKRAVPMELQISDAY 171 >gi|283833704|ref|ZP_06353445.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220] gi|291071390|gb|EFE09499.1| conserved hypothetical protein [Citrobacter youngae ATCC 29220] Length = 251 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 66/178 (37%), Gaps = 38/178 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHV-----LLSCG 58 I+ G +G+GK+T + L L+++ V R G + + + L Sbjct: 14 LIAVVGCDGSGKSTLTADLVEHLEKQ--WVVERRYLGLVSGETGDKIKRLPLIGTWLERR 71 Query: 59 VDEFGAEAEAI--------------VFAAARLDHVENVIRPALMEGKILLCDRF---LDS 101 + ++ +++ +F+ R+ + V R G +++ DR+ S Sbjct: 72 LAAKSSKTQSMSTGSPALWAILIMYIFSLRRMAKMRKVQRLT-QTGMLIIGDRYPQAEFS 130 Query: 102 SYAYQGERDSSQHLFLDSLQE-ISVQEV---------MPDCTIILDLPVDIGLKRVQN 149 + Y G + + L+ ++ +E P I LD+ ++ R Q+ Sbjct: 131 GFHYDGPGIGIERVS-GWLKCYLAKRERQLYQKMACYRPQLIIRLDIDIETAFSRKQD 187 >gi|227889190|ref|ZP_04006995.1| deoxyadenosine kinase [Lactobacillus johnsonii ATCC 33200] gi|227850419|gb|EEJ60505.1| deoxyadenosine kinase [Lactobacillus johnsonii ATCC 33200] Length = 215 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ SLL L + + V P +L + Sbjct: 4 IVLSGPIGAGKSSLTSLLAEHLGTQAFYEGVDNNP------------ILPLYYKDMAHYT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + L+H I A+ + + DR +DS A Sbjct: 52 --FLLNTYLLNHRLAQINQAIRDHNSV-SDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R+Q R E D Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154 >gi|310823434|ref|YP_003955792.1| deoxynucleoside kinase family protein [Stigmatella aurantiaca DW4/3-1] gi|309396506|gb|ADO73965.1| Deoxynucleoside kinase family protein [Stigmatella aurantiaca DW4/3-1] Length = 219 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 15/155 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G GKT+ +LL + V P + L F Sbjct: 8 RYIVVEGPIGVGKTSLSNLLAERFNARRVLEVVEENPFLSSF-------YLDRQKYAFQT 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + ++ +R + + + L + D +L D +A L+ + Sbjct: 61 QTFFLL---SRFRQQQELFQQDLFSSVTV-SD-YLFAKDRIFACLTLDSHELALYDRVFE 115 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 + + PD I L +D+ L R++ R E Sbjct: 116 ALGPRVTKPDLVIYLQARLDVLLHRIKKRGREFER 150 >gi|77736093|ref|NP_001029745.1| deoxycytidine kinase [Bos taurus] gi|122139964|sp|Q3MHR2|DCK_BOVIN RecName: Full=Deoxycytidine kinase; Short=dCK gi|75773424|gb|AAI05142.1| Deoxycytidine kinase [Bos taurus] gi|296486436|gb|DAA28549.1| deoxycytidine kinase [Bos taurus] Length = 260 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQSYACLSRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ + + + D + Q + D I L + L R+ R E Sbjct: 142 YESDCMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V + + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHDSLIEKVKDFL 257 >gi|9630264|ref|NP_046691.1| hypothetical protein SPBc2p139 [Bacillus phage SPBc2] gi|16079087|ref|NP_389910.1| nucleotide kinase; phage SPbeta [Bacillus subtilis subsp. subtilis str. 168] gi|221309934|ref|ZP_03591781.1| hypothetical protein Bsubs1_11206 [Bacillus subtilis subsp. subtilis str. 168] gi|221314257|ref|ZP_03596062.1| hypothetical protein BsubsN3_11132 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319179|ref|ZP_03600473.1| hypothetical protein BsubsJ_11058 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323454|ref|ZP_03604748.1| hypothetical protein BsubsS_11182 [Bacillus subtilis subsp. subtilis str. SMY] gi|81342014|sp|O31896|YORR_BACSU RecName: Full=SPBc2 prophage-derived uncharacterized protein yorR gi|2634421|emb|CAB13920.1| putative nucleotide kinase; phage SPbeta [Bacillus subtilis subsp. subtilis str. 168] gi|3025617|gb|AAC13112.1| unknown [Bacillus phage SPbeta] Length = 165 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 43/205 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG + K+T + L + L+ P + + L G ++ Sbjct: 3 LIILEGPDCCFKSTVAAKLSKELK--------------YPIIKGSSFELAKSGNEK---- 44 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +F +H L + ++ DRF+ S+ Y + L L+ I Sbjct: 45 ----LF-----EHFNK-----LADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIED 90 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + + L + KR++ R +Y E KD+ +++ ++ N Sbjct: 91 KIKAKAKVVYLHADPSVIKKRLRVRGD-------EYIEGKDID---SILELYREVMSNAG 140 Query: 186 DRCHIVDSAH-SFQSVATNILNIVW 209 + D+ S +A +I+ +V Sbjct: 141 LHTYSWDTGQWSSDEIAKDIIFLVE 165 >gi|4092681|gb|AAC99457.1| dynein heavy chain isoform DHC1b [Chlamydomonas reinhardtii] Length = 1198 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 26/121 (21%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GK+T LL++ +R + P P R LL + Sbjct: 1038 GVIIV--GPSGSGKSTLWELLEKAYERLGRKPIVYKMNPKAMP-----RQQLLGSMNMDT 1090 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ ++ AAAR V++ L + ++CD +++SL Sbjct: 1091 REWSDGVLTAAAR-----KVVKEPLEQRSWIICD-------------GDVDPEWIESLNS 1132 Query: 123 I 123 + Sbjct: 1133 V 1133 >gi|6681141|ref|NP_031858.1| deoxycytidine kinase [Mus musculus] gi|1169273|sp|P43346|DCK_MOUSE RecName: Full=Deoxycytidine kinase; Short=dCK gi|12483750|gb|AAG53743.1|AF260315_1 deoxycytidine kinase [Mus musculus] gi|456677|emb|CAA54787.1| deoxycytidine kinase [Mus musculus] gi|12835866|dbj|BAB23394.1| unnamed protein product [Mus musculus] gi|12846337|dbj|BAB27131.1| unnamed protein product [Mus musculus] gi|26339272|dbj|BAC33307.1| unnamed protein product [Mus musculus] gi|26353146|dbj|BAC40203.1| unnamed protein product [Mus musculus] gi|37805359|gb|AAH60062.1| Deoxycytidine kinase [Mus musculus] gi|74199055|dbj|BAE30741.1| unnamed protein product [Mus musculus] gi|74208384|dbj|BAE26382.1| unnamed protein product [Mus musculus] gi|74208446|dbj|BAE26407.1| unnamed protein product [Mus musculus] gi|148673398|gb|EDL05345.1| deoxycytidine kinase [Mus musculus] Length = 260 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V V R E + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQA--SEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ + + + D + Q + D I L + L R+ R E Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTSF-DYLQEVP--VLTLDVNEDFKDKHESLVEKVKEFL 257 >gi|225713106|gb|ACO12399.1| Deoxynucleoside kinase [Lepeophtheirus salmonis] Length = 258 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 66/206 (32%), Gaps = 20/206 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG GAGKTT + +K +V EP A + L+ + Sbjct: 41 IVVEGNIGAGKTTFLQDIKELSPPGLIEVI--EEPVDEWQAYKDKFNLMDMMYQ--DPKK 96 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDSSQHLFLDS 119 + +F + + I + +R L S + G + ++ L+ Sbjct: 97 WSFLFQVQVQLSMMKKYKTPYSRP-IRIMERSLLSARFCFVENLYNNGFLEDAELHMLND 155 Query: 120 LQEISVQE----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L ++ D + L + +R+ R + L Y + V IHE Sbjct: 156 LYNFVIEHDCFICQTDLIVYLRTSPETAYQRMLQRSRSKAEKALPY--NQFVQIHELHED 213 Query: 176 IFLDIARNQP--DRCHIVDSAHSFQS 199 + QP R ++D + Sbjct: 214 WLFRKTKFQPLSSRVVVIDGDEELEK 239 >gi|57640588|ref|YP_183066.1| signal recognition particle GTPase [Thermococcus kodakarensis KOD1] gi|57158912|dbj|BAD84842.1| signal recognition particle GTPase [Thermococcus kodakarensis KOD1] Length = 342 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G G+GKTT I+ L +L++ + V + T A A L G + Sbjct: 148 IAFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQ--LEEHAKRVGVKV 203 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R+ +D +++I+ Sbjct: 204 IKHDYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRNELNRNLMDEMKKIA- 253 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 254 RVTKPDLVIF 263 >gi|255571119|ref|XP_002526510.1| uridylate kinase plant, putative [Ricinus communis] gi|223534185|gb|EEF35901.1| uridylate kinase plant, putative [Ricinus communis] Length = 210 Score = 53.1 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 66/220 (30%), Gaps = 57/220 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + Y A + R + S + Sbjct: 29 GGPGSGKGTQCANIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 68 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 69 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 112 Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + ++P+ + D + +R+ +R R ++ ++ + E Sbjct: 113 NRAAFESVTKIVPEFVLFFDCSEEEMERRLLSRNQGRVDDNIETIRKRFKVFLESSIPVV 172 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + + +D+A S + V ++ I + +K Sbjct: 173 EYY-----ESKGKVRKIDAAKSIEEVFEDVKAIFAQKDEK 207 >gi|327401640|ref|YP_004342479.1| signal recognition particle-docking protein FtsY [Archaeoglobus veneficus SNP6] gi|327317148|gb|AEA47764.1| signal recognition particle-docking protein FtsY [Archaeoglobus veneficus SNP6] Length = 376 Score = 52.7 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L + L + Y V + G T A A L + G + Sbjct: 184 IIFVGVNGTGKTTTIAKLAKRLTDRGYSVVLAA--GDTFRAGAIEQ--LEEHANRLGVKL 239 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I A +G ++L D R ++ +D L++I Sbjct: 240 IKHKAGADPAAVIYDAIAHAESKGIDVVLAD---------TAGRMHTKKNLIDQLEKI-K 289 Query: 126 QEVMPDCTIILD 137 + PD TI +D Sbjct: 290 RVTKPDLTIFVD 301 >gi|293378645|ref|ZP_06624805.1| deoxynucleoside kinase [Enterococcus faecium PC4.1] gi|292642776|gb|EFF60926.1| deoxynucleoside kinase [Enterococcus faecium PC4.1] Length = 235 Score = 52.7 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 38/199 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L + L+ K P + L +++ + Sbjct: 9 GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 59 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119 L I+ A +L DR + DS + + L Sbjct: 60 RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+EIS Q+ PD + + + + L R++ R E D + +++ + + + Sbjct: 114 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 169 Query: 180 IARNQ---PDRCHIVDSAH 195 P ++D Sbjct: 170 WYEQFDICPK--IVIDGDK 186 >gi|227551105|ref|ZP_03981154.1| deoxyguanosine kinase [Enterococcus faecium TX1330] gi|257893861|ref|ZP_05673514.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408] gi|257896728|ref|ZP_05676381.1| deoxynucleoside kinase [Enterococcus faecium Com12] gi|227179766|gb|EEI60738.1| deoxyguanosine kinase [Enterococcus faecium TX1330] gi|257830240|gb|EEV56847.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408] gi|257833293|gb|EEV59714.1| deoxynucleoside kinase [Enterococcus faecium Com12] Length = 239 Score = 52.7 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 38/199 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L + L+ K P + L +++ + Sbjct: 13 GAGKSTLTEMLAQDLETK---------PFYENVEDNEVLPLFYSNPEKYTFLLQIFFLNK 63 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGER------------DSSQHLFLDS 119 L I+ A +L DR + DS + + L Sbjct: 64 RFLA-----IKDAFSHDDNVL-DRSIYEDSMLFHLNADLGRVSEVEVKQYEGLLETMLKE 117 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L+EIS Q+ PD + + + + L R++ R E D + +++ + + + Sbjct: 118 LEEISPQK-KPDLLVYIRVSFETMLARIKKRGREYEQLEQDP---ELYSYYKELNRRYEE 173 Query: 180 IARNQ---PDRCHIVDSAH 195 P ++D Sbjct: 174 WYEQFDICPK--IVIDGDK 190 >gi|268320241|ref|YP_003293897.1| deoxynucleoside kinase [Lactobacillus johnsonii FI9785] gi|262398616|emb|CAX67630.1| deoxynucleoside kinase [Lactobacillus johnsonii FI9785] Length = 215 Score = 52.7 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ SLL L + + V P +L + Sbjct: 4 IVLSGPIGAGKSSLTSLLAEHLGTQAFYEGVDNNP------------ILPLYYKDMAHYT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + L+H I A+ + + DR +DS A Sbjct: 52 --FLLNTYLLNHRLAQINQAIRDHNSV-SDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R+Q R E D Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154 >gi|154422787|ref|XP_001584405.1| Adenylate kinase family protein [Trichomonas vaginalis G3] gi|121918652|gb|EAY23419.1| Adenylate kinase family protein [Trichomonas vaginalis G3] Length = 218 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 78/224 (34%), Gaps = 41/224 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ FI G G+GK T +++ + G + R + Sbjct: 1 MSTKDFIFVLGGPGSGKGTQSAVIA---KEYGI--------GYLSTGDLLRETIKKLENP 49 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-- 118 E + + ++N L++ K ++ + +H F+D Sbjct: 50 PKDMSEEELNKIKELAEIMKN---GGLVDDKTVI------DLIKKKMSSSKEEHWFIDGF 100 Query: 119 -----SLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + + + P T + +++P D+ + R+ R S D + ++ + +K Sbjct: 101 PRKMSQCEAFAAELGEP-VTCLYINVPEDVLINRLLKRGET--SGRAD--DNEEAI--KK 153 Query: 173 RRQIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVWE 210 R + +++ + + + + +D S V + + + + Sbjct: 154 RLKTYIEESQPVIEHYKGKGKVAEIDGNRSIDQVHESCVEAIKK 197 >gi|311262318|ref|XP_003129122.1| PREDICTED: deoxycytidine kinase-like isoform 1 [Sus scrofa] Length = 260 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQNEFEELTTSQKSGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQSYACLSRIRAQLAALNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ + + + D + Q + D I L + L R+ R E Sbjct: 142 YESDCMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ ++++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHSSLVEKVKEFL 257 >gi|255065184|ref|ZP_05317039.1| deoxynucleoside kinase family protein [Neisseria sicca ATCC 29256] gi|261364726|ref|ZP_05977609.1| hypothetical protein NEIMUCOT_04967 [Neisseria mucosa ATCC 25996] gi|255050605|gb|EET46069.1| deoxynucleoside kinase family protein [Neisseria sicca ATCC 29256] gi|288567024|gb|EFC88584.1| deoxynucleoside kinase family protein [Neisseria mucosa ATCC 25996] Length = 211 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 55/151 (36%), Gaps = 15/151 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G+GK L + + P P ++ Sbjct: 4 RYIVVEGSIGSGKNALSRRLAEHFSALS----LAENPEHNPF------LMKFYANASHHG 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 A + F R + V ++I+ +G +++ D FL D + + Q LF D Q Sbjct: 54 LATELFFLMRRAESV-DIIKNEYAQGGMVVAD-FLLEKDRIFTPVVLNEDEQQLFADLKQ 111 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 +I Q PD I L VD KR+Q R Sbjct: 112 KILPQYPAPDLVIYLQTAVDGNRKRLQKRGD 142 >gi|124027583|ref|YP_001012903.1| hypothetical protein Hbut_0703 [Hyperthermus butylicus DSM 5456] gi|123978277|gb|ABM80558.1| hypothetical protein Hbut_0703 [Hyperthermus butylicus DSM 5456] Length = 196 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 54/172 (31%), Gaps = 7/172 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L I FEG G GKTT LL L+R+ V A L Sbjct: 1 MADRLLIVFEGGPGIGKTTLSRLLAELLERRGRKTCVV---WDAVRGIAPVLSRLFGEWY 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E +F +L + + + ++ D +++ AY L+ L Sbjct: 58 RAPRELIEYMFLGYQLRRLHECVE---ADTDTVILDYGVEAPLAYMEADGVPYPKELEEL 114 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 E + IL+ PV V+ R + + + E+ Sbjct: 115 AEAVLSGWR-VVVFILEQPVAYSTDVVRWEDPRRAQGYARRLIARALSLVER 165 >gi|329668131|gb|AEB94079.1| deoxyadenosine kinase [Lactobacillus johnsonii DPC 6026] Length = 215 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ SLL L + P F Sbjct: 4 IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 56 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + RL + IR + DR +DS A Sbjct: 57 YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R+Q R E D Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154 >gi|220906738|ref|YP_002482049.1| adenylate kinase [Cyanothece sp. PCC 7425] gi|254806984|sp|B8HMS3|KAD_CYAP4 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|219863349|gb|ACL43688.1| adenylate kinase [Cyanothece sp. PCC 7425] Length = 195 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 76/217 (35%), Gaps = 30/217 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDE 61 I F G GAGK T L L + D+ TP + + L S + Sbjct: 3 RLILF-GPPGAGKGTQAKHLVDLLDIPHISTGDIFRAAVRNQTPLGQQVQAYLDSGRLVP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E + H +V + +++G + + + L + Sbjct: 62 D----ELTINLIQERLHQSDVQKGWILDG------------FPRTLAQAEALEKLLHQIN 105 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLD 179 + D + L +P ++ +R+ R +ES D E +K + ++ K LD Sbjct: 106 QPY------DRVLSLTVPEEVLTQRLVLRAE-KESRKDDTPEVIQKRLGVYWKDTAPLLD 158 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 RNQ R +D V I +IV +L +++ Sbjct: 159 FYRNQ-QRLATIDGNQPESDVTAQIQHIVDQLKGEKI 194 >gi|116630402|ref|YP_819555.1| deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323] gi|311111601|ref|ZP_07712998.1| deoxyadenosine kinase [Lactobacillus gasseri MV-22] gi|116095984|gb|ABJ61136.1| Deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323] gi|311066755|gb|EFQ47095.1| deoxyadenosine kinase [Lactobacillus gasseri MV-22] Length = 216 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ SLL L + P F Sbjct: 5 IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 57 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + RL + IR + DR +DS A Sbjct: 58 YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 108 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R+Q R E D Sbjct: 109 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRTFEQLSTD 155 >gi|321466350|gb|EFX77346.1| hypothetical protein DAPPUDRAFT_305834 [Daphnia pulex] Length = 224 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 69/218 (31%), Gaps = 41/218 (18%) Query: 6 FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEF 62 F+ EG G+GK++ ++ + + V + EP ++L L +++ Sbjct: 12 FVVSVEGNIGSGKSSFLTHFQSY-----PGVKIYSEPVEDWCDVGGHNLLALLYSNPEKW 66 Query: 63 GAEAEAIVFAAARLDHVE------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-- 114 ++ V + ++ +I +L RF Q S Sbjct: 67 SFAFQSTVQLSRLNIILQPTNANIKMIERSLQNN------RFCFLEIGKQMGALSPPEYA 120 Query: 115 ---LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + + L++ + + D + L ++ +R++NR E+ + Sbjct: 121 VLTKWYEWLEKKADIGL--DLIVYLRTSPEVAHQRMKNRKRPEENEVP-------LSYIT 171 Query: 172 KRRQIFLDIARNQ-------PDRCHIVDSAHSFQSVAT 202 + P I+D+ S + V Sbjct: 172 LVHDCYESWLVGDGQTTPNCPAPVLILDANRSLEEVFQ 209 >gi|300362721|ref|ZP_07058896.1| deoxyadenosine kinase [Lactobacillus gasseri JV-V03] gi|300353149|gb|EFJ69022.1| deoxyadenosine kinase [Lactobacillus gasseri JV-V03] Length = 215 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ SLL L + P F Sbjct: 4 IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 56 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + RL + IR + DR +DS A Sbjct: 57 YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R+Q R E D Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRTFEQLSTD 154 >gi|238852758|ref|ZP_04643164.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4] gi|238834608|gb|EEQ26839.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4] Length = 215 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 48/167 (28%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ SLL L + P F Sbjct: 4 IVLSGPIGAGKSSLTSLLAEHLGTQ----AFYEGVDNNPILPL---YYKDMAHYTFLLNT 56 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + RL + IR + DR +DS A Sbjct: 57 YLLNH---RLAQINQAIRDHNS-----VSDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R+Q R E D Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRTFEQLSTD 154 >gi|58338190|ref|YP_194775.1| deoxyadenosine kinase [Lactobacillus acidophilus NCFM] gi|227902623|ref|ZP_04020428.1| deoxyadenosine kinase [Lactobacillus acidophilus ATCC 4796] gi|108936024|sp|P0C1F9|DGK1_LACAC RecName: Full=Deoxyadenosine kinase; Short=DADO kinase; Short=DAK; AltName: Full=Deoxynucleoside kinase complex I S-component gi|58255507|gb|AAV43744.1| deoxyadenosine kinase [Lactobacillus acidophilus NCFM] gi|227869616|gb|EEJ77037.1| deoxyadenosine kinase [Lactobacillus acidophilus ATCC 4796] Length = 215 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL-----------DSSYAYQGERDSSQHL 115 + L+H I A+ E + DR + DSS A + Sbjct: 53 --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSSVA-DPTEFKIYND 108 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D LKR++ R E D Sbjct: 109 LLENMMEDTPGNPSKKPDLLIYIHVSLDTMLKRIKKRGRSFEQISTD 155 >gi|218462065|ref|ZP_03502156.1| hypothetical protein RetlK5_22433 [Rhizobium etli Kim 5] Length = 212 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 65/208 (31%), Gaps = 47/208 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64 EG+ GAGKT + LQR+ Y V RE G + + Sbjct: 43 IEGVSGAGKT----AVADELQRRGYHVVHGDRELAYRGDPTTGKPLDE----PADESVAD 94 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + A H+ +V GK+ ++ DR S ++ + F+D Sbjct: 95 RS-----AWVHAHHIWDV-------GKVRAMIVDR--RSLISFFCGGCRNLPRFVDWF-- 138 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 D LD+ +D +R+ R ER +M + Sbjct: 139 --------DAVFELDVDLDTLKRRLAARPEDEYGGRPA--ERALIMRLHATNE------- 181 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 + P +D+ + IL+ E Sbjct: 182 DVPKHAQRIDATAPLAVIVDEILSKCGE 209 >gi|56479472|ref|YP_161061.1| deoxynucleoside kinase [Aromatoleum aromaticum EbN1] gi|56315515|emb|CAI10160.1| Deoxynucleoside kinase [Aromatoleum aromaticum EbN1] Length = 213 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 74/233 (31%), Gaps = 36/233 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ +I EG GAGKT+ L L D + + + Sbjct: 2 LDKARYIVIEGPIGAGKTSLARRLAERLDA---DTVLEQPEQNAFLGRFYQDPQRWALPT 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117 + F R+D + + A +I+ + D D +A D L+ Sbjct: 59 QLS-------FLFQRVDQLAALAERADAHPRIVSDFILD--KDPLFATLNLADDELALYR 109 Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + V PD I L + ++R++ R E + + E+ + Sbjct: 110 RIFDSMQPAAVRHPDLVIYLQAKPETLVERIRRRGVESERRITERY-------LEQVAER 162 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-----ELVQKRVSPLSSKKD 224 + + D+A V ILN V EL+ R+ + ++ Sbjct: 163 YARFFYDY-------DAA-PLFVVDAEILNPVEQDDDFELLLDRLRNMRGYRE 207 >gi|257082544|ref|ZP_05576905.1| shikimate kinase [Enterococcus faecalis E1Sol] gi|257086738|ref|ZP_05581099.1| shikimate kinase [Enterococcus faecalis D6] gi|257416099|ref|ZP_05593093.1| shikimate kinase [Enterococcus faecalis AR01/DG] gi|256990574|gb|EEU77876.1| shikimate kinase [Enterococcus faecalis E1Sol] gi|256994768|gb|EEU82070.1| shikimate kinase [Enterococcus faecalis D6] gi|257157927|gb|EEU87887.1| shikimate kinase [Enterococcus faecalis ARO1/DG] gi|315027260|gb|EFT39192.1| shikimate kinase [Enterococcus faecalis TX2137] gi|315169734|gb|EFU13751.1| shikimate kinase [Enterococcus faecalis TX1342] Length = 168 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR++ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIKEDTENQRPLAIERSSKEIIALFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIINEILQQLKE 168 >gi|225873841|ref|YP_002755300.1| deoxynucleoside kinase family protein [Acidobacterium capsulatum ATCC 51196] gi|225794396|gb|ACO34486.1| deoxynucleoside kinase family protein [Acidobacterium capsulatum ATCC 51196] Length = 213 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 29/177 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F++ EG GK++ ++L +Q + EP P L Sbjct: 9 RFVAVEGPLRVGKSSLAAILAERMQARRIT-----EPEDNPF--------LDRFYQAQSG 55 Query: 65 EAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119 A A + F R + + + ++ D +L D +AY D+ L+ Sbjct: 56 MAFATQMWFLKERHAQMSELTDFS----TPVVAD-YLFEKDKLFAYLNLSDAELDLYRHY 110 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFER-----KDVMIH 170 Q + PD + L ++ +R++ + E A D Y E+ + H Sbjct: 111 YQMLRASIPTPDLVVYLQATPEVLKQRLRRKGVPGERAISDAYIEQVVEAYEHFFFH 167 >gi|54696744|gb|AAV38744.1| deoxycytidine kinase [Homo sapiens] gi|54696746|gb|AAV38745.1| deoxycytidine kinase [Homo sapiens] gi|61357638|gb|AAX41419.1| deoxycytidine kinase [synthetic construct] gi|61357644|gb|AAX41420.1| deoxycytidine kinase [synthetic construct] Length = 260 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 46/240 (19%), Positives = 84/240 (35%), Gaps = 40/240 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGV---- 59 IS EG AGK+T +++LK+ + ++V V R + + +S Sbjct: 24 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 81 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKI-------------LLCDRFLDSSY 103 + E F + IR L GK+ + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSR-IRAQLASLNGKLKDAEKSVLFFERSVYSDRYIFASN 140 Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 141 LYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGI 200 Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 201 PLEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|20091018|ref|NP_617093.1| hypothetical protein MA2176 [Methanosarcina acetivorans C2A] gi|19916107|gb|AAM05573.1| predicted protein [Methanosarcina acetivorans C2A] Length = 223 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 26/126 (20%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV--------HVTREP--GGTPAAEA 49 MN +FI GI+G GKTTH++L+ +L+ K + P A Sbjct: 1 MNQKPMFICITGIDGVGKTTHVNLIMGYLREKGIKCQYKWLRSHYFFSLPLLAFCRIAGY 60 Query: 50 ARHVLLSCGVDEFGAEAEA------------IVFAAARLDHVENVIRPALMEGKILLCDR 97 R L G + + E I+F L V P G ++CDR Sbjct: 61 TRVSTL--GDSQKCSYHEFYKSRFVSAFYPWILFFDTLLFTTIKVYIPMFF-GTSIVCDR 117 Query: 98 FLDSSY 103 F+ + Sbjct: 118 FVYDTL 123 >gi|111115064|ref|YP_709682.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia afzelii PKo] gi|110890338|gb|ABH01506.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia afzelii PKo] Length = 200 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L + L+ V E F + Sbjct: 2 IVIEGLIGVGKTTLGNILSKELK-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P I LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|283833706|ref|ZP_06353447.1| hypothetical ATP-binding protein YghT [Citrobacter youngae ATCC 29220] gi|291071392|gb|EFE09501.1| hypothetical ATP-binding protein YghT [Citrobacter youngae ATCC 29220] Length = 241 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 77/249 (30%), Gaps = 68/249 (27%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVL---LSCGVD 60 I+ G +G+GK++ L FLQ+ VH+ ++ G A +L L+ + Sbjct: 8 LIAVIGSDGSGKSSVCEHLIIFLQKYGPATQVHLGKQAGNVERAVIKIPLLGRILNKKIS 67 Query: 61 EF---------GAEAEAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSY--AYQGE 108 + G ++ + AL G I+L DRF + AY G Sbjct: 68 KHKVKDAKKLPGPVPALVITSFVIRRVFRFRRMLALRQRGMIILADRFPQTQIPGAYDGT 127 Query: 109 ---RDSSQHLFLDSLQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 + + F+ L + PD I L++ +D+ R Sbjct: 128 VFPANVTGSAFVSWLAGLERSAFAWMTRHKPDLVIKLNVDLDVACAR-----------KP 176 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHI-------------VDSAHSFQSVATNILN 206 D H + +A+ + +D+ + V + Sbjct: 177 D---------HRR-----ESLAKK----IAVTPQLTFDGAPLVDIDANMPLEEVLRDTEA 218 Query: 207 IVWELVQKR 215 V + R Sbjct: 219 AVARFMAAR 227 >gi|222152336|ref|YP_002561511.1| deoxyadenosine kinase protein [Streptococcus uberis 0140J] gi|222113147|emb|CAR40569.1| putative deoxyadenosine kinase protein [Streptococcus uberis 0140J] Length = 213 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 78/238 (32%), Gaps = 51/238 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L +V P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117 + A + L+ I+ A +L DR + + Y+ + L + Sbjct: 47 KKYAFLLQIFFLNKRFKSIKEAYKADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQ 105 Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167 + L+E+ + + PD I +D+ D L+R++ R FE+ D Sbjct: 106 ELLGNMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRS--------FEQVDDNPGLE 157 Query: 168 MIHEKRRQIFLDIARNQPDRCHI-----VDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 + + + D + H+ +D V + L V E+V ++ L Sbjct: 158 DYYAQVHGEYPDWY----ENYHVSPKMKIDGNQ-LDFVQNPDDLKTVLEMVDTKLKEL 210 >gi|216264245|ref|ZP_03436237.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 156a] gi|218249730|ref|YP_002374762.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi ZS7] gi|221217724|ref|ZP_03589192.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 72a] gi|223888754|ref|ZP_03623345.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 64b] gi|224532635|ref|ZP_03673256.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi WI91-23] gi|224533763|ref|ZP_03674351.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi CA-11.2a] gi|225549058|ref|ZP_03770033.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 94a] gi|225550072|ref|ZP_03771032.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 118a] gi|226321557|ref|ZP_03797083.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi Bol26] gi|215980718|gb|EEC21525.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 156a] gi|218164918|gb|ACK74979.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi ZS7] gi|221192401|gb|EEE18620.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 72a] gi|223885570|gb|EEF56669.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 64b] gi|224512415|gb|EEF82795.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi WI91-23] gi|224513056|gb|EEF83419.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi CA-11.2a] gi|225369184|gb|EEG98637.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 118a] gi|225370284|gb|EEG99722.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 94a] gi|226232746|gb|EEH31499.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi Bol26] gi|312148290|gb|ADQ30949.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi JD1] gi|312149703|gb|ADQ29774.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi N40] Length = 201 Score = 52.7 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 21/167 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I EG+ G GKTT ++L + L+ V E F Sbjct: 1 MVIVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPV 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFL 117 + I F R ++ V R +G + DR + + D +++ Sbjct: 56 Q---INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYI 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 D L + P + LD +D +R++NR E DY E Sbjct: 108 DLLDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 154 >gi|13162355|ref|NP_077072.1| deoxycytidine kinase [Rattus norvegicus] gi|1352235|sp|P48769|DCK_RAT RecName: Full=Deoxycytidine kinase; Short=dCK gi|508570|gb|AAA65098.1| deoxycytidine kinase [Rattus norvegicus] Length = 260 Score = 52.3 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 88/241 (36%), Gaps = 42/241 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA------RLDH------VENVIRPALMEGKILLCDRFLDSS 102 L ++ E + +F + R + + +P L + + DR++ +S Sbjct: 82 LQMMYEK--PERWSFIFQSYACLSRIRAQLASLNGSLRDAEKPVLFFERSVYSDRYIFAS 139 Query: 103 YAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 Y+ + + + D + Q + D I L + L R+ R E Sbjct: 140 NLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYIRGRDEEQG 199 Query: 158 -CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 L+Y E+ + ++H + F + + P +D F+ +++ V E Sbjct: 200 IPLEYLEKLHYKHESWLLHRTLKTNFEYL-QEVP--ILTLDVNLDFKDKEESLVEKVKEF 256 Query: 212 V 212 + Sbjct: 257 L 257 >gi|89889557|ref|ZP_01201068.1| putative deoxyguanosine kinase [Flavobacteria bacterium BBFL7] gi|89517830|gb|EAS20486.1| putative deoxyguanosine kinase [Flavobacteria bacterium BBFL7] Length = 341 Score = 52.3 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 70/212 (33%), Gaps = 25/212 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG G+GKT+ + K P L + + Sbjct: 145 FIAIEGNIGSGKTSLSHKIAEDFNGKQVLERFADNPFLP---------LFYKDTERYAFP 195 Query: 66 AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122 E F A R + ++V + L + D ++ S + + L Sbjct: 196 LEMS-FLADRYQQLSDDVAQQDLFSEFTV-ADYYVIKSLIFSKITLEKEEYSLYKRLFNM 253 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + V PD I L D L+ ++ R E + + +Q + D R Sbjct: 254 MYKELVKPDLYIYLYQTEDRLLQNIKKRGRDYEQNI-------EASYLSQIQQGYADFIR 306 Query: 183 NQPD-RCHIVDSAHSFQSV--ATNILNIVWEL 211 +Q D + ++D V + L ++ ++ Sbjct: 307 SQQDLKIKVIDVT-DLDFVNNQEDYLKVLEQI 337 >gi|42519873|ref|NP_965803.1| deoxyadenosine kinase [Lactobacillus johnsonii NCC 533] gi|81667316|sp|Q74HC3|DGK1_LACJO RecName: Full=Deoxyadenosine kinase; Short=DADO kinase; Short=DAK; AltName: Full=Deoxynucleoside kinase complex I S-component gi|403983|gb|AAB09750.1| deoxyadenosine kinase [Lactobacillus acidophilus] gi|41584163|gb|AAS09769.1| deoxyadenosine kinase [Lactobacillus johnsonii NCC 533] Length = 215 Score = 52.3 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 54/167 (32%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ SLL L + + V P +L + Sbjct: 4 IVLSGPIGAGKSSLTSLLAEHLGTQAFYEGVDNNP------------ILPLYYKDMAHYT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + L+H I A+ + + DR +DS A Sbjct: 52 --FLLNTYLLNHRLAQINQAIRDHNSV-SDRSIYEDALFFKMNVDSGIA-DPTEFKIYDS 107 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R+Q R E D Sbjct: 108 LLENMMEQAPGNPSKKPDLLIYIHVSLDTMLHRIQKRGRKFEQLSTD 154 >gi|291414461|ref|XP_002723474.1| PREDICTED: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Oryctolagus cuniculus] Length = 357 Score = 52.3 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 82/244 (33%), Gaps = 37/244 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58 I+ +G +GK + L K++ T + S G Sbjct: 60 KVITVDGNICSGKGKLAEQIAEKLGLKHFPEAGIHYADSTTGDGRPLDLQFSGGCSLEKF 119 Query: 59 ------VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106 D ++ ++ A+RL + + L G+ ++ +R + S + + Q Sbjct: 120 YDDPKSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFVEAMHSQ 178 Query: 107 GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 G + ++++++ E + P I +D+PV R+Q + + E Sbjct: 179 GYIRKQCVEHYNQVKKVTICEYLPPHVAIYIDVPVPEIQSRIQKKGNPHEMKI------- 231 Query: 166 DVMIHEKRRQIFLD-IARNQPDRCHIV--DS--AHSFQSVATNILNIVWELVQKRVSPLS 220 + + ++C ++ D+ A V +I E ++ P Sbjct: 232 TAAYLQDIENAYKKTFLPEMSEKCEVLQYDAREAQDADKVVEDI-----EYLKCDKGPWL 286 Query: 221 SKKD 224 S+ D Sbjct: 287 SQDD 290 >gi|218513048|ref|ZP_03509888.1| thymidylate kinase [Rhizobium etli 8C-3] Length = 51 Score = 52.3 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 26/35 (74%) Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 FLDIA +P+RCH+V++ + +++A IL IV +L Sbjct: 1 FLDIAAREPERCHVVNAMQTEEAIAAQILAIVKQL 35 >gi|118488800|gb|ABK96210.1| unknown [Populus trichocarpa] Length = 199 Score = 52.3 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 63/209 (30%), Gaps = 49/209 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + Y A + R + S + Sbjct: 18 GGPGSGKGTQCANIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDS---SQHLFLDSLQEIS 124 +I+ + EGKI+ + + + A Q + + + Sbjct: 58 ----------TMIQNMIKEGKIVPSE--VTINLLQKAMQDSGNDKFLIDGFPRNEENRAA 105 Query: 125 VQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFL 178 + + P + D P + +R+ +R RE ++ ++ + E + + Sbjct: 106 FEAVTKIEPAFVLFFDCPEEEMERRILSRNQGREDDNIETIRKRFKVFLESSLPVVEYY- 164 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + VD+A V + I Sbjct: 165 ----DSKGKVQKVDAAKPIDEVFEVVKAI 189 >gi|148705024|gb|EDL36971.1| thymidylate kinase family LPS-inducible member, isoform CRA_b [Mus musculus] Length = 272 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 73 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 125 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 126 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 178 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 179 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 230 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 231 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 268 >gi|300710513|ref|YP_003736327.1| adenylate kinase [Halalkalicoccus jeotgali B3] gi|299124196|gb|ADJ14535.1| adenylate kinase [Halalkalicoccus jeotgali B3] Length = 207 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 53/231 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK T S + + T +A R + Sbjct: 7 LIV--GAPGAGKGTQSSNIAE---EYGVEHVTT--------GDALRAN-KDTETEYGTPR 52 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + V ++R AL D ++ Y R+ SQ +L+ + ++ Sbjct: 53 EYMETGELVPDELVNEIVREALES-----ADGYVLDGY----PRNESQVEYLEGITDL-- 101 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--------------LDYFERKDVMIHE 171 D + LD+ + + R+ R E+ + ++D + Sbjct: 102 -----DVILYLDVAEEELVHRLTGRRVDPETGENYHTEFDMPDDEAVRERLVQRDDDTED 156 Query: 172 KRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ F + +D S V +I + E V+ Sbjct: 157 TVKERLRVFEENTAPVIEHYEDHAGFVRIDGEGSPDEVWADIEAAIDERVR 207 >gi|225708776|gb|ACO10234.1| Deoxynucleoside kinase [Caligus rogercresseyi] Length = 233 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 32/225 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + EG +GKTT + L + L + V V EP ++L + Sbjct: 6 VCVEGNIASGKTTFLKLFEAGLSGCKSGPSVRVVEEPVSAWQNLHGHNIL---ELMYKDP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YA--------YQGERDSSQ 113 +F + + + +I L +R L ++ +A G Sbjct: 63 SRWGHLFQSYVA-LTMTQVHTMRAKEEIKLMERSLLTAEKCFAANLYNSGNMSGAEYRVL 121 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEK 172 + L +V+PD + L + LKRV +R ES LDY R+ +HE Sbjct: 122 KEWYAYLNAYHKMKVLPDLIVYLQTTPETCLKRVISRSRHEESTIPLDYL-RELHELHEA 180 Query: 173 RRQIFLDIARNQPDR--CHIVDSA-----HSFQSVATNILNIVWE 210 + ++ + +VD+ S ++ +LN + + Sbjct: 181 C------LIQDSSLKVPVLVVDAENNNFLLSPETSFKPVLNQIMD 219 >gi|30690243|ref|NP_850867.1| PYR6; cytidylate kinase/ uridylate kinase [Arabidopsis thaliana] gi|117958619|gb|ABK59674.1| At5g26667 [Arabidopsis thaliana] gi|332006175|gb|AED93558.1| Uridylate kinase [Arabidopsis thaliana] Length = 208 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 57/220 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + A + R + S + Sbjct: 21 GGPGSGKGTQCAYIVEH-----------YGYTHLSAGDLLRAEIKSGSENG--------- 60 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 61 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAIQENGNDKFLIDGFPRNEE 104 Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + E+ P + D P + KR+ R RE ++ ++ + E Sbjct: 105 NRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVI 164 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +++A ++V + I +K Sbjct: 165 HYY-----EAKGKVRKINAAKPIEAVFEEVKAIFSPEAEK 199 >gi|15668466|ref|NP_247264.1| signal recognition particle, receptor [Methanocaldococcus jannaschii DSM 2661] gi|2500888|sp|Q57739|Y291_METJA RecName: Full=Probable signal recognition particle protein MJ0291 gi|1591013|gb|AAB98276.1| signal recognition particle, receptor [Methanocaldococcus jannaschii DSM 2661] Length = 409 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT I+ L L++K Y V + G T A A L G + Sbjct: 205 IVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAA--GDTFRAGAIEQ--LEQHAKNVGVKV 260 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A G ++L D R ++ ++ +++ V Sbjct: 261 IKHKPGADSAAVIYDAIQHAKARGIDVVLAD---------TAGRQATNVNLMEEIKK-VV 310 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 311 RVTKPDLVIF 320 >gi|37574004|gb|AAH52004.2| Deoxycytidine kinase [Mus musculus] Length = 260 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V V R E + + Sbjct: 24 ISIEGNIAAGKSTSVNILKQA--SEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ + + + D + Q + D I L + L R+ R E Sbjct: 142 YESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTSF-DYLQEVP--VLTLDVNEDFKDKHESLVEKVKEFL 257 >gi|167037736|ref|YP_001665314.1| guanylate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320116151|ref|YP_004186310.1| guanylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856570|gb|ABY94978.1| Guanylate kinase [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319929242|gb|ADV79927.1| guanylate kinase [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 207 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 41/214 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G GAGK T L + + + TR+P E + S Sbjct: 6 KKGLLIVLSGPSGAGKGTICKALMKKEKNLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E E ++ + A DH ++ + L EG ++ L Sbjct: 65 EKMIENDSFLEWAKVYDHYYGTPKDFVLKNLEEGNDVV--------------------LE 104 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +D + ++E P+ I LP + R++ R + E + F+ Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ +++ S + I I+ Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIKAII 185 >gi|146103035|ref|XP_001469469.1| adenylate kinase [Leishmania infantum] gi|134073839|emb|CAM72578.1| putative adenylate kinase [Leishmania infantum JPCM5] Length = 220 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 72/236 (30%), Gaps = 56/236 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKR-----FLQRKN--YDVHVTREPGGTPAAEAARHVLLSC 57 LFI G G+GK T LL + L N + + + P G AE L Sbjct: 3 LFIILFGPPGSGKGTVSHLLVKEYGFVHLSAGNLLREEVLKKSPLGLRCAEIMSEGSLIP 62 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + PA+ + ILL G + + + Sbjct: 63 DELVVDLVC-------------NRLSEPAVQKHGILL-----------DGFPRTLRQAEV 98 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164 + + D I+LD+ +I L R +R + + D + Sbjct: 99 -----LRARGFKFDMMILLDVSPEILLNRCLSRRLDPVTGRIYNLKSDPPSPDVVDRLQI 153 Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + HE+R QI+ + + D +D+ V + + + +Q Sbjct: 154 RSDDTKEKHERRMQIYNSQKATLIAHYSDIIIEIDADPEINVVFKELQKKINKRLQ 209 >gi|157876730|ref|XP_001686708.1| adenylate kinase [Leishmania major strain Friedlin] gi|68129783|emb|CAJ09089.1| putative adenylate kinase [Leishmania major strain Friedlin] Length = 220 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 41/234 (17%), Positives = 77/234 (32%), Gaps = 52/234 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI G G+GK T LL + + VH+ A R +L G Sbjct: 3 LFIILFGPPGSGKGTVSHLLV---KEYGF-VHL-------SAGNLLREEVLKKS--PLGR 49 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILL---CDRFLDSSYAYQGERDSSQHLF--LDS 119 I+ +L+ ++++ C+R S A Q L Sbjct: 50 RCAEIMS------------EGSLIPDELVVDLVCNR--LSEQAVQKHGILLDGFPRNLRQ 95 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERKD 166 + ++ + D I LD+ +I L R +R + + D + + Sbjct: 96 AEVLTARGFKFDMMIFLDVSPEILLDRCLSRRLDPVTGRIYNLKSDPPSPEVADRLQIRS 155 Query: 167 VMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 HE+R QI+ + + D +++ + V + + + +Q Sbjct: 156 DDTKEKHERRMQIYNSQKATLIAHYSDIIIEINADPEIKVVFKELQKKINKRLQ 209 >gi|224067399|ref|XP_002302480.1| predicted protein [Populus trichocarpa] gi|118488191|gb|ABK95915.1| unknown [Populus trichocarpa] gi|222844206|gb|EEE81753.1| predicted protein [Populus trichocarpa] Length = 199 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 63/213 (29%), Gaps = 57/213 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + Y A + R + S + Sbjct: 18 GGPGSGKGTQCANVVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 58 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 101 Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + + P + + P + KR+ +R RE ++ ++ + E Sbjct: 102 NRAAFEAVTKIEPAFVLFFNCPEEEMEKRILSRNQGREDDNIETIRKRFNVFLESSLPVV 161 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + + + VD+A S + V + I Sbjct: 162 EYY-----DSKGKVRKVDAAKSVEEVFEAVKAI 189 >gi|126439290|ref|YP_001060284.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 668] gi|126455460|ref|YP_001067543.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1106a] gi|134280177|ref|ZP_01766888.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 305] gi|217420618|ref|ZP_03452123.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 576] gi|237813674|ref|YP_002898125.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei MSHR346] gi|242314321|ref|ZP_04813337.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1106b] gi|254180765|ref|ZP_04887363.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1655] gi|254259178|ref|ZP_04950232.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1710a] gi|126218783|gb|ABN82289.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 668] gi|126229102|gb|ABN92642.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1106a] gi|134248184|gb|EBA48267.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 305] gi|184211304|gb|EDU08347.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1655] gi|217396030|gb|EEC36047.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 576] gi|237503888|gb|ACQ96206.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei MSHR346] gi|242137560|gb|EES23962.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1106b] gi|254217867|gb|EET07251.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1710a] Length = 229 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 20 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 72 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + I A ++ D F+ + +A D L+ Sbjct: 73 Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 128 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 168 >gi|149369725|ref|ZP_01889577.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [unidentified eubacterium SCB49] gi|149357152|gb|EDM45707.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [unidentified eubacterium SCB49] Length = 354 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 27/214 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ LL K + P E F E Sbjct: 160 YIAIEGNIGAGKTSLSHLLSADFNAKLILERFSDNPFLPKFYE-------DQSRYAFPLE 212 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 F A R + I+ + + ++ D D+ + + Q + +++ Sbjct: 213 MS---FLADRYQQLLEDIKQFDLFKERVIAD--YDAYKSLIFANITLQDEEFNLYKKLFS 267 Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + PD + L D L+ ++ R E + K + +L+ Sbjct: 268 LMYKELPKPDVYVYLYQNTDRLLENIKKRGRKYEKSI-------KADYLTKINEGYLEFI 320 Query: 182 R-NQPDRCHIVDSAHSFQSVA--TNILNIVWELV 212 + Q + I+D + V + L IV +++ Sbjct: 321 KNQQANNVKIIDIS-EMDFVKHRADYLKIVRQIL 353 >gi|168065809|ref|XP_001784839.1| predicted protein [Physcomitrella patens subsp. patens] gi|162663593|gb|EDQ50349.1| predicted protein [Physcomitrella patens subsp. patens] Length = 191 Score = 52.3 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 27/209 (12%), Positives = 67/209 (32%), Gaps = 37/209 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK T + + ++ ++ + + + ++ + G Sbjct: 1 GGPGSGKGTQCNKIVEHFGFEHLSAGELLRAEQNSDGEIGKMIKGLI-NEGKLVPSEMTV 59 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 ++ A KIL+ D F R+ D + Sbjct: 60 KLILNA----------MSKCSNNKILI-DGF---------PRNDENREVWDRVA-----G 94 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQ 184 + P+ I + ++ R+ +R R+ L+ ++ + +E+ + + IA Sbjct: 95 LKPEFIIFITSSEEVMQNRLLSRNEGRDDDNLETIRKRFKLFNEQTLPVIKHYESIAA-- 152 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 ++ S + V I + ++Q Sbjct: 153 ---VQKINGMQSVEDVFAEIRPLFNPILQ 178 >gi|66816361|ref|XP_642190.1| deoxyadenosine kinase [Dictyostelium discoideum AX4] gi|74856744|sp|Q54YL2|DAK_DICDI RecName: Full=Deoxyadenosine kinase; AltName: Full=DddDAK; Short=DAK gi|37780191|gb|AAO64433.1| deoxyadenosine kinase [Dictyostelium discoideum] gi|60470288|gb|EAL68268.1| deoxyadenosine kinase [Dictyostelium discoideum AX4] Length = 245 Score = 52.0 bits (124), Expect = 5e-05, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 59/198 (29%), Gaps = 40/198 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63 I+ G+ GAGKTT L + L T E ++ L ++G Sbjct: 24 IAISGLIGAGKTTLAVALGKVLNL------------PTYFEEVIDNLYLQDFYKDPKKYG 71 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHL------ 115 + + + + + G + DR + DS +A Sbjct: 72 FQLQIYLLNSRFQ---QQQQIIWQARGG--VQDRTIYEDSVFAKMLNESGLLDDRDYNTY 126 Query: 116 --FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +L PD I LD+ + L+R++ R E + + Sbjct: 127 CKLFQNLSNFMR---RPDLIIHLDVSPEKSLERIKLRNRDCEKDV-------SLEYLQNL 176 Query: 174 RQIFLDIARNQPDRCHIV 191 + + ++ ++ Sbjct: 177 YNAYHEFLQDISRYIPVI 194 >gi|78101495|pdb|2AXP|A Chain A, X-Ray Crystal Structure Of Protein Bsu20280 From Bacillus Subtilis. Northeast Structural Genomics Consortium Target Sr256. gi|78101496|pdb|2AXP|B Chain B, X-Ray Crystal Structure Of Protein Bsu20280 From Bacillus Subtilis. Northeast Structural Genomics Consortium Target Sr256. gi|262118822|pdb|3KB2|A Chain A, Crystal Structure Of Yorr Protein In Complex With Phosphorylated Gdp From Bacillus Subtilis, Northeast Structural Genomics Consortium Target Sr256 gi|262118823|pdb|3KB2|B Chain B, Crystal Structure Of Yorr Protein In Complex With Phosphorylated Gdp From Bacillus Subtilis, Northeast Structural Genomics Consortium Target Sr256 Length = 173 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 43/205 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG + K+T + L + L+ P + + L G ++ Sbjct: 3 LIILEGPDCCFKSTVAAKLSKELK--------------YPIIKGSSFELAKSGNEKL--- 45 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +H L + ++ DRF+ S+ Y + L L+ I Sbjct: 46 ----------FEHFNK-----LADEDNVIIDRFVYSNLVYAKKFKDYSILTERQLRFIED 90 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + + L + KR++ R +Y E KD+ +++ ++ N Sbjct: 91 KIKAKAKVVYLHADPSVIKKRLRVRGD-------EYIEGKDID---SILELYREVXSNAG 140 Query: 186 DRCHIVDSAH-SFQSVATNILNIVW 209 + D+ S +A +I+ +V Sbjct: 141 LHTYSWDTGQWSSDEIAKDIIFLVE 165 >gi|301768282|ref|XP_002919554.1| PREDICTED: deoxycytidine kinase-like [Ailuropoda melanoleuca] Length = 260 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 87/240 (36%), Gaps = 40/240 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGT--PAAEA 49 I+ EG +GKTT +++LK+ + ++V E + Sbjct: 24 IAIEGNIASGKTTFVNILKQVCED--WEVVPEPVARWCNVQNAQGDCEELTTSQESGGNV 81 Query: 50 ARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSY 103 + + F ++ A + + R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQSYACL-SRIRAQLACLDGKLKDAEKPVLFFERSIYSDRYVFASN 140 Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157 Y+ E + + D + + Q ++ D I L + L R+ R E Sbjct: 141 LYESECMNETEWTIYQDWHDWMNQQFGQSLVLDGIIYLRATPEKCLNRIYLRGRNEEQGI 200 Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ ++ V E + Sbjct: 201 PLEYLEKLHYKHESWLLHRTLKTNF-DFLQEIP--ILTLDINEDFKDKHDGLIEKVKEFL 257 >gi|224825652|ref|ZP_03698756.1| deoxynucleoside kinase [Lutiella nitroferrum 2002] gi|224601876|gb|EEG08055.1| deoxynucleoside kinase [Lutiella nitroferrum 2002] Length = 211 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 59/182 (32%), Gaps = 26/182 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGV 59 M+ ++ EG GAGK+ L + + EP P R+ Sbjct: 1 MSQLRYVVVEGPIGAGKSALARRLADYW---GVS-LLAEEPAANPFLGRFYRNPQQHGLA 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLF 116 + F R D + L ++ D FL D+ +A D +H Sbjct: 57 TQLS-------FLLQRADLAAEMQDGPLRTAPLV-SD-FLFEKDALFAR-VNLDEPEHAL 106 Query: 117 LDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 L + + +PD I L D+ L RV +R ESA + ++ Sbjct: 107 YQRLTDRLLPAFPVPDLVIYLQASEDVLLSRVASRAKETESAFPE-------GYLKRVHA 159 Query: 176 IF 177 + Sbjct: 160 AY 161 >gi|317493497|ref|ZP_07951918.1| hypothetical protein HMPREF0864_02683 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918440|gb|EFV39778.1| hypothetical protein HMPREF0864_02683 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 235 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 60/244 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTP--------AAEAARHVLLS 56 I+ G +G+GK+T L +Q+ V H+ ++ G +A + Sbjct: 9 IAVIGSDGSGKSTVCEHLINCVQKYGPAVRIHLGKQAGNVERAVVKLPLMGKALNKTIKH 68 Query: 57 CGVDEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGE- 108 V A I+ R + G I+L DR+ AY G Sbjct: 69 NKVKSAKKLPGPVPALVIMSFVFRRLLRFRRMLACHRRGLIVLADRYPQIQIPGAYDGTV 128 Query: 109 --RDSSQHLFLDSLQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + + F+ L + PD I L++ +D+ R D Sbjct: 129 FPANVTGSRFVLWLAGLERSSFSWMANHKPDLVIKLNVDLDVACAR-----------KPD 177 Query: 161 YFERKDVMIHEKRRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWEL 211 H + +A+ + +D+ V + + Sbjct: 178 ---------HRR-----EALAKKIAITPQLTFDGSQLVDIDANKPLDEVLIDAEKAITSF 223 Query: 212 VQKR 215 ++ R Sbjct: 224 MEAR 227 >gi|206973775|ref|ZP_03234693.1| hypothetical protein BCH308197_2535 [Bacillus cereus H3081.97] gi|222096093|ref|YP_002530150.1| hypothetical protein BCQ_2433 [Bacillus cereus Q1] gi|206747931|gb|EDZ59320.1| hypothetical protein BCH308197_2535 [Bacillus cereus H3081.97] gi|221240151|gb|ACM12861.1| possible uridine kinase [Bacillus cereus Q1] Length = 187 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 72/222 (32%), Gaps = 55/222 (24%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56 MN I+ I G GKTT L L + +D + E T + Sbjct: 2 MNKKTKIITIAAISGGGKTTVTERLTEKLTNSKALYFDSYH-FENCPTDICKWI------ 54 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + + H+ IR + +E I+ D +AY Sbjct: 55 --NEGANYNEWVLTPLIKDIQHL---IRDSNVEYIIV------DYPFAY----------- 92 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 93 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDAMSEIHNDLKHY 138 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 139 ITYARKAYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180 >gi|195996877|ref|XP_002108307.1| hypothetical protein TRIADDRAFT_63579 [Trichoplax adhaerens] gi|190589083|gb|EDV29105.1| hypothetical protein TRIADDRAFT_63579 [Trichoplax adhaerens] Length = 237 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 51/159 (32%), Gaps = 21/159 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FIS GI +GKT+ L + L V EP R + F + Sbjct: 38 FISVAGITASGKTSVTKALSKSL-----CVPSFHEP--VLDNNYLRDFYRNPRRHGFAVQ 90 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ-GERDSSQHLFLDS----- 119 + H + + + +G+ + DR + Y +D+ + Sbjct: 91 VNLL------NAHFQQQ-QQIVWQGRGGIQDRSIYEDLVYAKVLKDTGLMEEREYNTYTS 143 Query: 120 -LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 +S P+ + LD+ + R+ R ES Sbjct: 144 LFNNLSNFLKRPNLIVYLDVTPEECKARIDKRGCKGESG 182 >gi|317493499|ref|ZP_07951920.1| hypothetical protein HMPREF0864_02685 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918442|gb|EFV39780.1| hypothetical protein HMPREF0864_02685 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 247 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 60/174 (34%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLL-------- 55 I+ G +G GK+T + L + L++ + V R G + + + L Sbjct: 17 LIAVVGCDGTGKSTLTADLVKQLKK--HWVTERRYLGLVSGEDGDKIKRLPLVGVWLERR 74 Query: 56 ----SCGVDEFGAEAEAIV-------FAAARLDHVENVIRPALMEGKILLCDRF---LDS 101 S ++ A+ F+ R ++ I A G +++ DR+ S Sbjct: 75 LATKSSKTQSMSTKSPALWAALIMFGFSLRRRANLRKAICLA-QSGVLVISDRYPQADVS 133 Query: 102 SYAYQGERDSSQH---------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + Y G + + L + + P+ I LD+ +D R Sbjct: 134 GFHYDGPGIGVERVEEGVKRHLAERERLLYQQMALLRPELIIRLDIDIDTAFSR 187 >gi|313891228|ref|ZP_07824847.1| deoxyguanosine kinase [Streptococcus pseudoporcinus SPIN 20026] gi|313120591|gb|EFR43711.1| deoxyguanosine kinase [Streptococcus pseudoporcinus SPIN 20026] Length = 213 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 51/234 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L +L DV P + Sbjct: 1 MLIVLAGTIGAGKSSLATALGDYL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-----------SSYAYQGERDSSQ 113 + A + L+ I+ A +L DR + + + E D Q Sbjct: 47 KKYAFLLQIFFLNKRFKSIKEAYKADNNVL-DRSIFEDELFLKLNYKNGNVTKAELDIYQ 105 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV----- 167 L + L+E+ + + PD I +D+ + L+R+ R FE+ D Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFEKMLERIAKRGRS--------FEQVDDNPGLE 157 Query: 168 MIHEKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + + + + P +D + + ++ +L ++ + ++ Sbjct: 158 EYYYQVHEEYPTWYEEYEVSPK--MRIDGDALDFVQNPEDLSK-VLQMIDDKLK 208 >gi|53720432|ref|YP_109418.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei K96243] gi|167721067|ref|ZP_02404303.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei DM98] gi|167740038|ref|ZP_02412812.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei 14] gi|167817257|ref|ZP_02448937.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei 91] gi|167847155|ref|ZP_02472663.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei B7210] gi|167895737|ref|ZP_02483139.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei 7894] gi|167904128|ref|ZP_02491333.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei NCTC 13177] gi|167912388|ref|ZP_02499479.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei 112] gi|167920342|ref|ZP_02507433.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei BCC215] gi|254191600|ref|ZP_04898103.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei Pasteur 52237] gi|254194847|ref|ZP_04901277.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei S13] gi|254299146|ref|ZP_04966596.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 406e] gi|52210846|emb|CAH36833.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia pseudomallei K96243] gi|157808829|gb|EDO85999.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 406e] gi|157939271|gb|EDO94941.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei Pasteur 52237] gi|169651596|gb|EDS84289.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei S13] Length = 227 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 18 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + I A ++ D F+ + +A D L+ Sbjct: 71 Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 166 >gi|77408452|ref|ZP_00785191.1| deoxynucleoside kinase family protein [Streptococcus agalactiae COH1] gi|77172975|gb|EAO76105.1| deoxynucleoside kinase family protein [Streptococcus agalactiae COH1] Length = 213 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 45/232 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L + L DV +L + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGQHL---GTDVFYEAVDNNP---------VLDLYYQDPKK 48 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-----------SSYAYQGERDS 111 A + F R I+ A +L DR + + + E D Sbjct: 49 YAFLLQIFFLNKRFQS----IKEAYKANNNVL-DRSIFEDELFLTLNFKNGNVTKTELDI 103 Query: 112 SQHLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L + L+E+ + + PD + +D+ D L+R+ R E + + + Sbjct: 104 YKELLANMLEELEGMPKKRPDLLVYIDVSFDKMLERIDKRGRSFEQVDSNP---ELYDYY 160 Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSA-----HSFQSVATNILNIVWELVQK 214 ++ + + N P +D + + + ++L+ + +QK Sbjct: 161 KQVHSEYPEWYENYDVSPK--IRIDGNKLDFVKNPEDL-QHVLDTIDSELQK 209 >gi|289579955|ref|YP_003478421.1| adenylate kinase [Natrialba magadii ATCC 43099] gi|289529508|gb|ADD03859.1| adenylate kinase [Natrialba magadii ATCC 43099] Length = 211 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 74/229 (32%), Gaps = 48/229 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + + + + T +A R + + E Sbjct: 6 ILILGAPGAGKGTQSANISDEF---DVEHVTT--------GDALRSN-KQMDISDMDTEY 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + + V + + A+++ + D F+ Y R+ Q L+ + ++ Sbjct: 54 DTPGEYMDQGELVPDEVVNAIVDEALSQADGFVLDGY----PRNLEQAEELEDMTDL--- 106 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHEK 172 D + LD+ + + R+ R E+ + D E+++ E Sbjct: 107 ----DVVLYLDVSEEELVHRLTGRRMDPETGEIYHVEYNPPEDPEVEDRLEQREDDTEET 162 Query: 173 RRQIFLDIARNQPDRCH----------IVDSAHSFQSVATNILNIVWEL 211 R+ L + R + VD + V ++ + + Sbjct: 163 VRER-LRVYRENTEPVVEYYDDQGTLERVDGEQAPDDVWESVKETIEDA 210 >gi|257089891|ref|ZP_05584252.1| predicted protein [Enterococcus faecalis CH188] gi|312903314|ref|ZP_07762494.1| shikimate kinase [Enterococcus faecalis TX0635] gi|256998703|gb|EEU85223.1| predicted protein [Enterococcus faecalis CH188] gi|310633190|gb|EFQ16473.1| shikimate kinase [Enterococcus faecalis TX0635] gi|315147271|gb|EFT91287.1| shikimate kinase [Enterococcus faecalis TX4244] gi|315577700|gb|EFU89891.1| shikimate kinase [Enterococcus faecalis TX0630] Length = 168 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDKALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR++ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIIHEILQQLKE 168 >gi|224136530|ref|XP_002326883.1| predicted protein [Populus trichocarpa] gi|222835198|gb|EEE73633.1| predicted protein [Populus trichocarpa] Length = 199 Score = 52.0 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 61/213 (28%), Gaps = 57/213 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + Y A + R + S + Sbjct: 18 GGPGSGKGTQCANIVEHF---GY--------THLSAGDLLRAEIKSGSENG--------- 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 58 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQDSGNDKFLIDGFPRNEE 101 Query: 121 QEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + + P + D P + +R+ +R RE ++ ++ + E Sbjct: 102 NRAAFEAVTKIEPAFVLFFDCPEEEMERRILSRNQGREDDNIETIRKRFKVFLESSLPVV 161 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + + + VD+A V + I Sbjct: 162 EYY-----DSKGKVQKVDAAKPIDEVFEVVKAI 189 >gi|297180383|gb|ADI16600.1| deoxynucleoside kinases [uncultured gamma proteobacterium HF0010_01E20] Length = 247 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 63/193 (32%), Gaps = 23/193 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G GKTT L L VT P + Sbjct: 39 YLAIEGPIGVGKTTLAKKLADLLNYPLLLEPVTENPF-------LDRFYAEGTNQALPTQ 91 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + F R V+++ L++ ++ D F+ D +A + L+ Sbjct: 92 ---LFFLLQRAKQVQDMPGNDLLDRTLV-TD-FMFEKDDIFATLTLDPAELDLYRQIHNS 146 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181 + + PD I L P I +RV R E + +DY E F Sbjct: 147 LELAPPRPDLVIYLQAPARILRQRVFRRGIDFEQSIHIDYLEALADSY-----AGFFHYY 201 Query: 182 RNQPDRCHIVDSA 194 + P IV++A Sbjct: 202 DDAP--VLIVNAA 212 >gi|240103695|ref|YP_002960004.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54) (FtsY/SRP54) [Thermococcus gammatolerans EJ3] gi|239911249|gb|ACS34140.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54) (FtsY/SRP54) [Thermococcus gammatolerans EJ3] Length = 328 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G+GKTT I+ L +L++ V + T A A V G + Sbjct: 133 IVFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 188 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R+ +D +++I Sbjct: 189 IKHSYGADPAAVAYDAIQHAKARGIDVVLVD---------TAGRNELNRNLMDEMKKIV- 238 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 239 RVTKPDLVIF 248 >gi|320162575|ref|YP_004175800.1| putative deoxynucleoside kinase [Anaerolinea thermophila UNI-1] gi|319996429|dbj|BAJ65200.1| putative deoxynucleoside kinase [Anaerolinea thermophila UNI-1] Length = 216 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 58/173 (33%), Gaps = 18/173 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ EG+ G GKTT +L+ Q P + E + Sbjct: 1 MYLAIEGVIGVGKTTLARMLQPAFQANLLLEVFEENPFLSKFYE---------DRARYAF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + F +R I G+ L+ D + D+ +A ++ + Sbjct: 52 QTQIF-FLLSRYHQQRRGIPELTAGGRNLISD-YTFEKDALFARINLEGDELEMYYRVHE 109 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSL----RESACLDYFERKDVMIH 170 ++ + PD + L D+ ++R+ R + E A +D Sbjct: 110 ALAEKIQPPDLIVYLRATTDLLMERITRRDRVYERNMERAYIDELNHAYDEFF 162 >gi|30690246|ref|NP_850868.1| PYR6; cytidylate kinase/ uridylate kinase [Arabidopsis thaliana] gi|79328724|ref|NP_001031942.1| PYR6; cytidylate kinase/ uridylate kinase [Arabidopsis thaliana] gi|2497486|sp|O04905|UMPK_ARATH RecName: Full=Uridylate kinase; Short=UK; AltName: Full=UMP/CMP kinase; AltName: Full=Uridine monophosphate kinase; Short=UMP kinase gi|2121275|gb|AAB71135.1| UMP/CMP kinase [Arabidopsis thaliana] gi|332006176|gb|AED93559.1| Uridylate kinase [Arabidopsis thaliana] gi|332006177|gb|AED93560.1| Uridylate kinase [Arabidopsis thaliana] Length = 202 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 57/220 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + A + R + S + Sbjct: 21 GGPGSGKGTQCAYIVEH-----------YGYTHLSAGDLLRAEIKSGSENG--------- 60 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 61 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAIQENGNDKFLIDGFPRNEE 104 Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + E+ P + D P + KR+ R RE ++ ++ + E Sbjct: 105 NRAAFEKVTEIEPKFVLFFDCPEEEMEKRLLGRNQGREDDNIETIRKRFKVFLESSLPVI 164 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +++A ++V + I +K Sbjct: 165 HYY-----EAKGKVRKINAAKPIEAVFEEVKAIFSPEAEK 199 >gi|12835871|dbj|BAB23396.1| unnamed protein product [Mus musculus] Length = 395 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 196 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 248 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 249 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 301 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 302 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 353 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 354 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 391 >gi|76811432|ref|YP_334687.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1710b] gi|76580885|gb|ABA50360.1| deoxynucleoside kinase family protein [Burkholderia pseudomallei 1710b] Length = 241 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 32 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 84 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + I A ++ D F+ + +A D L+ Sbjct: 85 Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 139 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 140 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 180 >gi|294660490|ref|NP_853273.2| deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)] gi|284812152|gb|AAP56841.2| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)] gi|284930759|gb|ADC30698.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(high)] gi|284931336|gb|ADC31274.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. F] Length = 208 Score = 52.0 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 73/215 (33%), Gaps = 24/215 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + ++ G+ +GK+T + L + + L + Sbjct: 1 MLVAISGMVASGKSTLSNNLHLHYKNSK---ILYEYDEKDEVFNQFLEWLYNKNAVVD-- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQE- 122 F + + + ++ AL + + DRF + + + S + + E Sbjct: 56 ----FAFQSYVVQNYSRHLKQALSQNYDYIFSDRFNLEHFIFAKNKISKKPKKFINAYEA 111 Query: 123 ----ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + ++ +PD I LD D KR+ R + E++ + ++ I+ Sbjct: 112 MFDVLVSEDKIPDLVIYLDFNFDEFKKRIFKRNRIVETSTFN----DNIDYWRNLHSIYK 167 Query: 179 D--IARNQPDRCHIV--DS-AHSFQSVATNILNIV 208 I + Q + +V D+ + + + + I+ Sbjct: 168 KEFINQQQKYKFKVVYLDTNNKNEEDIFKQSVEII 202 >gi|322503494|emb|CBZ38579.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 220 Score = 51.6 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 71/236 (30%), Gaps = 56/236 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKR-----FLQRKN--YDVHVTREPGGTPAAEAARHVLLSC 57 LFI G G+GK T LL + L N + + + P G AE L Sbjct: 3 LFIILFGPPGSGKGTVSHLLVKEYGFVHLSAGNLLREEVLKKSPLGLRCAEIMSEGSLIP 62 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + PA + ILL G + + + Sbjct: 63 DELVVDLVC-------------NRLSEPAAQKHGILL-----------DGFPRTLRQAEV 98 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164 + + D I+LD+ +I L R +R + + D + Sbjct: 99 -----LRARGFKFDMMILLDVSPEILLNRCLSRRLDPVTGRIYNLKSDPPSPDVVDRLQI 153 Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + HE+R QI+ + + D +D+ V + + + +Q Sbjct: 154 RSDDTKEKHERRMQIYNSQKATLIAHYSDIIIEIDADPEINVVFKELQKKINKRLQ 209 >gi|149701603|ref|XP_001489275.1| PREDICTED: similar to Deoxycytidine kinase [Equus caballus] Length = 263 Score = 51.6 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 88/240 (36%), Gaps = 38/240 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 +S EG AGK+T +++LK+ + ++V VTR + + + Sbjct: 24 VSIEGNIAAGKSTFVNILKQVCED--WEVVPEPVTRWCNVQSTQDEFEELTTVEKTGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLD------HVENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R ++N +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQLYACLSRIRAQFASLNGKLKNAEKPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ + + + D + + Q + D I L + L R+ R E Sbjct: 142 YESDCMNETEWTIYQDWHDWMNKQMGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQDIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 202 LEYLEKLHSKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYDSLVEKVKEFLN 258 >gi|11499644|ref|NP_070886.1| signal recognition particle receptor (dpa) [Archaeoglobus fulgidus DSM 4304] gi|2648469|gb|AAB89189.1| signal recognition particle receptor (dpa) [Archaeoglobus fulgidus DSM 4304] Length = 340 Score = 51.6 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G+ G GKTT I+ + L ++ Y V + G T A A L G + Sbjct: 148 IAFVGVNGTGKTTTIAKVANRLIKQGYSVVLAA--GDTFRAGAIEQ--LEEHAKRLGVKL 203 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + I+ A +G ++L D R ++ LD L++I Sbjct: 204 IKHKHGSDPAAVIYDAIKHAESKGIDVVLAD---------TAGRMHTKKNLLDQLEKI-K 253 Query: 126 QEVMPDCTIILD 137 + PD I +D Sbjct: 254 RVTKPDLIIFVD 265 >gi|225716652|gb|ACO14172.1| Deoxycytidine kinase [Esox lucius] Length = 264 Score = 51.6 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 41/242 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T + LL+ Q K+++V + R + + Sbjct: 25 ISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNVQTENSDFEELTTSQKSGGNV 82 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRFLDSSYA 104 L ++ A A R + + + + DR++ ++ Sbjct: 83 LQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREADNPVQFFERSVYSDRYIFAANL 142 Query: 105 YQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + L + + D I L + + ++R++ R E Sbjct: 143 YESECLNETEWSIYQDWHGWLHRQFGKHIQLDGIIYLRVAPETCMERLRLRGREEEQGIP 202 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS--FQSVA-TNILNIVWE 210 L+Y E+ + + H+ R + + +D V +++ V E Sbjct: 203 LEYLEKLHFKHESWLQHKTMRMEYQYL---NDVPILTLDVNEDFKVDKVKCADMIEKVKE 259 Query: 211 LV 212 + Sbjct: 260 FL 261 >gi|224534368|ref|ZP_03674946.1| deoxyguanosine/deoxyadenosine kinase [Borrelia spielmanii A14S] gi|224514470|gb|EEF84786.1| deoxyguanosine/deoxyadenosine kinase [Borrelia spielmanii A14S] Length = 200 Score = 51.6 bits (123), Expect = 7e-05, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L + L+ V E F + Sbjct: 2 IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P + LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|315169029|gb|EFU13046.1| shikimate kinase [Enterococcus faecalis TX1341] Length = 168 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR++ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIINEILQQLKE 168 >gi|307171079|gb|EFN63122.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Camponotus floridanus] Length = 421 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 23/174 (13%) Query: 7 ISFEGIEGAGKTTHISLLKR---------------FLQRKNYDVHVTREPGGTPAAEAAR 51 I EG AGK+ + L ++ YDV + Sbjct: 79 IVVEGPIAAGKSKLAARLAEEFDMVYLPPPTFDEYYINEYGYDVRTLDDRLSLSTQSCDV 138 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 L+ + F + D + L G+ ++ R S Y + + Sbjct: 139 QKFLTNPEHPNVPMFQFHYFQL-KFDQYITALLHLLSTGQGVVLSRSFYSDYIFAKAMTN 197 Query: 112 SQHLFLDSLQ------EIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 + ++ ++L I+ + + P + LD+PVD+ ++++ R E Sbjct: 198 AGYMRQEALNFYIDIVRIAKLMMLRPHLIVYLDIPVDVVKEKIKKRGIPYEINS 251 >gi|228904794|ref|ZP_04068848.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222] gi|228854808|gb|EEM99412.1| Deoxyguanosine kinase [Bacillus thuringiensis IBL 4222] Length = 215 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 77/225 (34%), Gaps = 41/225 (18%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 +G+ GAGKTT L+ E G P AE + + A Sbjct: 2 VDGVVGAGKTTLAQLISERFN------IPIFEELGNPDAERLLNRFYAKKTRW--AFTTQ 53 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQGERDSSQHLFLDS--- 119 I FA R + +I+ EG +L DR + S A E + + Sbjct: 54 IFFANERWE----MIKKVHEEGHGIL-DRSIFGDNIFASMLAEDLEDGGEGMTWEEYRTY 108 Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +I P+ I L ++ +R+ NR ES ++ E+ Sbjct: 109 KKLLDQILEHSQPPELLIYLQCSAEVAKQRIDNRGRGIESEV-------EMAYWERLNDK 161 Query: 177 FLDIARNQPD--RCHI-VD----SAHSFQSVATNILNIVWELVQK 214 + ++ + I VD + + ++L +V E ++K Sbjct: 162 YDVWYQDYDHSPKILINVDNLDFANNEEDK--ESVLALVGEALEK 204 >gi|289578515|ref|YP_003477142.1| guanylate kinase [Thermoanaerobacter italicus Ab9] gi|297544790|ref|YP_003677092.1| guanylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528228|gb|ADD02580.1| guanylate kinase [Thermoanaerobacter italicus Ab9] gi|296842565|gb|ADH61081.1| guanylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 207 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 39/213 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G GAGK T L + + T P + E + + E Sbjct: 6 KKGLLIVLSGPSGAGKGTICKALMEKEKDLKLSISATTRPPRSGEIEGKNYFFKTEEEFE 65 Query: 62 FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E ++ + A DH ++ + L EG ++ L + Sbjct: 66 KMIENDSFLEWAKVYDHYYGTPKDFVLKNLDEGNDVV--------------------LEI 105 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 D + ++E P+ I LP + R++ R + E + F+ Sbjct: 106 DIQGALKIKEKFPEGIFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS----------- 154 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ +++ S + I I+ Sbjct: 155 AYEELNYVSRYNYVVIN--DSIEEAVEKIRAII 185 >gi|167837747|ref|ZP_02464630.1| putative deoxyguanosine kinase/deoxyadenosine kinase [Burkholderia thailandensis MSMB43] Length = 227 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 18 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + I A ++ D F+ + +A D L+ Sbjct: 71 Q----LAFALQRERQAREIAAACEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 126 HLDAPTPAPDLVVYLQASPEVLFSRIQKRGEAMELQIGDAY 166 >gi|75758373|ref|ZP_00738496.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74494099|gb|EAO57192.1| Deoxyguanosine kinase [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 219 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 45/225 (20%), Positives = 77/225 (34%), Gaps = 41/225 (18%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 +G+ GAGKTT L+ E G P AE + + A Sbjct: 6 VDGVVGAGKTTLAQLISERFN------IPIFEELGNPDAERLLNRFYAKKTRW--AFTTQ 57 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQGERDSSQHLFLDS--- 119 I FA R + +I+ EG +L DR + S A E + + Sbjct: 58 IFFANERWE----MIKKVHEEGHGIL-DRSIFGDNIFASMLAEDLEDGGEGMTWEEYRTY 112 Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L +I P+ I L ++ +R+ NR ES ++ E+ Sbjct: 113 KKLLDQILEHSQPPELLIYLQCSAEVAKQRIDNRGRGIESEV-------EMAYWERLNDK 165 Query: 177 FLDIARNQPD--RCHI-VD----SAHSFQSVATNILNIVWELVQK 214 + ++ + I VD + + ++L +V E ++K Sbjct: 166 YDVWYQDYDHSPKILINVDNLDFANNEEDK--ESVLALVGEALEK 208 >gi|238809904|dbj|BAH69694.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 227 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 12/213 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63 + I G+ G+GK+T L + ++ V + P + + G Sbjct: 5 MIIGISGMIGSGKSTLAKGLHKHYKK---SVLLEEFQENDPVFNTFLKWMYEKQPNIHIG 61 Query: 64 AEAEAIVFAAARL-DHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDSSQHLFL 117 ++ I + V L + DRF Y + ++D Sbjct: 62 FQSYIIESLSDTFKKTVAKFKNNNLNFRDNHIFLDRFNIEHYVFAVVTLMDKDPKYQAGF 121 Query: 118 DSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D++ ++I E PD I +D+ + R+ R E E ++H +++ Sbjct: 122 DAMFEKIVDPEDNPDLAIFIDIDFNAFKARLLARGRASEVDNYAQNETYFKLLHSLYKKL 181 Query: 177 FLDIARNQPDRCHIVDS-AHSFQSVATNILNIV 208 ++ + I++S S + V +NI+ Sbjct: 182 YIRLVEKFKIPYVIINSNNKSEKEVLQEAINII 214 >gi|85691121|ref|XP_965960.1| guanylate kinase [Encephalitozoon cuniculi GB-M1] gi|19068527|emb|CAD24995.1| GUANYLATE KINASE [Encephalitozoon cuniculi GB-M1] Length = 217 Score = 51.6 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 34/210 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+ + G G+GK+T IS + + H TR P + + + Sbjct: 34 MIDGVHLVLTGPSGSGKSTIISHVLSKFPFEFSVSHTTRAPRNGEVNGKDYFFVTTEEFE 93 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + + ++ K ++ D Y G Sbjct: 94 SMVERQELLEYIQYNGNYYGTAAAQLRNPSKTVILD------LEYDGV------------ 135 Query: 121 QEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + ++ P+ I + +I +R++ R +K++ + + F Sbjct: 136 --LYCRKNCPNFVIIYIYCDKNIAYERLKKRMGSEN--------KKELEGRMRLYEKFDS 185 Query: 180 IARNQPDRC-HIVDSAHSFQSVATNILNIV 208 I DRC +++D++HS + + I+ Sbjct: 186 I----KDRCDYVIDNSHSLEKSKREVEEII 211 >gi|225552141|ref|ZP_03773081.1| deoxyguanosine/deoxyadenosine kinase [Borrelia sp. SV1] gi|226320807|ref|ZP_03796361.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 29805] gi|225371139|gb|EEH00569.1| deoxyguanosine/deoxyadenosine kinase [Borrelia sp. SV1] gi|226233782|gb|EEH32509.1| deoxyguanosine/deoxyadenosine kinase [Borrelia burgdorferi 29805] Length = 200 Score = 51.6 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L + L+ V E F + Sbjct: 2 IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P + LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|261402958|ref|YP_003247182.1| Adenylate kinase [Methanocaldococcus vulcanius M7] gi|261369951|gb|ACX72700.1| Adenylate kinase [Methanocaldococcus vulcanius M7] Length = 176 Score = 51.6 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 67/206 (32%), Gaps = 58/206 (28%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I+ G G GKTT +L++ L V E + L ++ + Sbjct: 3 IAITGTPGVGKTTVSKILEKKL---GVRVI--------NITEVVKKYKLYKEKDEDMDSY 51 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + +E I+ + +++ D + Sbjct: 52 VIDF-------EKLEEFIKNIETKEGVVILDGHV-------------------------S 79 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ- 184 + PD T++L +I +R++ R ++RK V+ E + LD+ + Sbjct: 80 HLLNPDYTVVLRCDPEIVKERLEKR----------KYDRKKVL--ENVQAEILDVCLCES 127 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVW 209 + + +D+ + + I+ + Sbjct: 128 KGKVYEIDTTGRDVEDIVEEIMTAIK 153 >gi|308189953|ref|YP_003922884.1| deoxyguanosine kinase [Mycoplasma fermentans JER] gi|319777234|ref|YP_004136885.1| deoxyguanosine kinase [Mycoplasma fermentans M64] gi|307624695|gb|ADN69000.1| deoxyguanosine kinase [Mycoplasma fermentans JER] gi|318038309|gb|ADV34508.1| Deoxyguanosine kinase [Mycoplasma fermentans M64] Length = 223 Score = 51.6 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 12/213 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFG 63 + I G+ G+GK+T L + ++ V + P + + G Sbjct: 1 MIIGISGMIGSGKSTLAKGLHKHYKK---SVLLEEFQENDPVFNTFLKWMYEKQPNIHIG 57 Query: 64 AEAEAIVFAAARL-DHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDSSQHLFL 117 ++ I + V L + DRF Y + ++D Sbjct: 58 FQSYIIESLSDTFKKTVAKFKNNNLNFRDNHIFLDRFNIEHYVFAVVTLMDKDPKYQAGF 117 Query: 118 DSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D++ ++I E PD I +D+ + R+ R E E ++H +++ Sbjct: 118 DAMFEKIVDPEDNPDLAIFIDIDFNAFKARLLARGRASEVDNYAQNETYFKLLHSLYKKL 177 Query: 177 FLDIARNQPDRCHIVDS-AHSFQSVATNILNIV 208 ++ + I++S S + V +NI+ Sbjct: 178 YIRLVEKFKIPYVIINSNNKSEKEVLQEAINII 210 >gi|291296956|ref|YP_003508354.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279] gi|290471915|gb|ADD29334.1| deoxynucleoside kinase [Meiothermus ruber DSM 1279] Length = 206 Score = 51.2 bits (122), Expect = 9e-05, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 30/165 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63 ++I+ G G+GK+T LL + G P E L+ + G Sbjct: 1 MYIAIAGNIGSGKSTLTGLLAQR-------------YGLLPVYETVDENPYLADFYADMG 47 Query: 64 AEA---EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118 A + A H+E I PA + ++ DR + D+ Q R S D Sbjct: 48 RWAFQSQVFFLAKRLRQHLEQ-INPA----QHVVQDRTIYEDAFIFAQNLRISGHLAERD 102 Query: 119 S-----LQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 L E I+ PD I + V+ + R E Sbjct: 103 WQTYLALYEGIAPALRKPDLLIYVRASVETLQAHIARRGRAYEQR 147 >gi|315039251|ref|YP_004032819.1| Deoxyadenosine kinase [Lactobacillus amylovorus GRL 1112] gi|312277384|gb|ADQ60024.1| Deoxyadenosine kinase [Lactobacillus amylovorus GRL 1112] Length = 215 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL-----------DSSYAYQGERDSSQHL 115 + L+H I A+ E + DR + DS A E L Sbjct: 53 --FLLNTYLLNHRLAQINQAIKEKNSV-SDRSIYEDALFFKMNADSKVADPTEFRIYDDL 109 Query: 116 FLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + +++ PD I + + +D LKR++ R E D Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLKRIKKRGRSFEQISTD 155 >gi|289579826|ref|YP_003478292.1| hypothetical protein Nmag_0133 [Natrialba magadii ATCC 43099] gi|289529379|gb|ADD03730.1| hypothetical protein Nmag_0133 [Natrialba magadii ATCC 43099] Length = 230 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 63/201 (31%), Gaps = 42/201 (20%) Query: 8 SFE--GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--FG 63 E G+ G GKTT + + L + VHVT R V L FG Sbjct: 4 VVEFVGLPGTGKTTLSRGVAKKLTTRG--VHVTEPTYELETRSTVRRVALKSRTAAVGFG 61 Query: 64 AEAEAIVFAAARL------DHVENVIRPALM-------------EGKILLCDRFLDSSYA 104 A + +A+R + + IR G L D+ + Sbjct: 62 RYPSAGL-SASRAVFNTDQQSLTDYIRVLFNLLYITGTITKRRSAGGACLLDQGV----- 115 Query: 105 YQG---ERDSSQHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 YQG S H + L +Q + PD + L++ R++ R Sbjct: 116 YQGIWSAGFRSHHKWAKILDRFDNILQRLSPDLIVFLEVDEATIADRLRKRSDGDT---- 171 Query: 160 DYFERKDVMIHEKRRQIFLDI 180 FE ++ R + + Sbjct: 172 -RFEP-GTETFDRGRAGYERL 190 >gi|254172639|ref|ZP_04879314.1| signal recognition particle-docking protein FtsY [Thermococcus sp. AM4] gi|214033568|gb|EEB74395.1| signal recognition particle-docking protein FtsY [Thermococcus sp. AM4] Length = 328 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G+GKTT I+ L +L++ V + T A A V G + Sbjct: 133 IVFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 188 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R+ +D +++I Sbjct: 189 IKHSYGADPAAVAYDAIQHAKARGIDVVLVD---------TAGRNELNRNLMDEMKKIV- 238 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 239 RVTKPDLVIF 248 >gi|300119333|ref|ZP_07057011.1| hypothetical protein BCSJ1_25751 [Bacillus cereus SJ1] gi|298723288|gb|EFI64052.1| hypothetical protein BCSJ1_25751 [Bacillus cereus SJ1] Length = 186 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 75/222 (33%), Gaps = 55/222 (24%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56 MN+ I+ + G GKTT L L + +D + E T + Sbjct: 1 MNNKTKIITIAAVSGGGKTTVTERLTEKLTNSKALYFDSYH-FENCPTDICKWI------ 53 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + + + H+ IR + ++ I+ D +AY Sbjct: 54 --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 91 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 92 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTKSEIHNDLMHY 137 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ R +P+ ++D A S + I ++ Sbjct: 138 INYARKAYLEALRTVKPNSDIVLDGALSVDEIINQIEEELYR 179 >gi|226311715|ref|YP_002771609.1| deoxyguanosine kinase [Brevibacillus brevis NBRC 100599] gi|226094663|dbj|BAH43105.1| deoxyguanosine kinase [Brevibacillus brevis NBRC 100599] Length = 213 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 15/160 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S + I+ EG G GKT+ L R + + V P E Sbjct: 1 MKS-ILITVEGPIGIGKTSLSRELSRACNLQLLEEIVYENPFLGKFYENI---------A 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118 E+ + E + F R ++++ L +G ++ D F ++ +A + + ++ +L Sbjct: 51 EWSFQLE-MFFLCNRYKQLQDIHSQFLNQGISVVSDYNIFKNTIFAKRTLQGNNLPKYLK 109 Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + +I +++ I + ++ +KR+ R E + Sbjct: 110 -IYDILTEDLPQAHLVIYMTASIETVMKRIAMRDREMERS 148 >gi|225012003|ref|ZP_03702440.1| Guanylate kinase [Flavobacteria bacterium MS024-2A] gi|225003558|gb|EEG41531.1| Guanylate kinase [Flavobacteria bacterium MS024-2A] Length = 189 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 77/223 (34%), Gaps = 45/223 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59 MNSG I F G+GKTT + L + + T R+P G + + LS Sbjct: 1 MNSGKLIVFSAPSGSGKTTLVHHLLSQTLPLGFSISATSRKPRGQEE-DGVDYYFLSASE 59 Query: 60 DEFGAEAEAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + E +A + + + + EGK +L D Sbjct: 60 FQMKIEEKAFLEYEEVYQNTFYGTYTSELERLWAEGKQVLFD------------------ 101 Query: 115 LFLDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +D + I++++ PD I + P + R++ R + E + E+ + I Sbjct: 102 --IDVVGGINIKKQYPDQTLAIFVK-PPSLNELEDRLRKRGTDSEEKIKERLEKAKIEI- 157 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + A D C I ++ ++ +V + + Sbjct: 158 --------EYATQF-DYCLI---NEDMETAKKEVVQLVSDFIN 188 >gi|239789007|dbj|BAH71153.1| ACYPI006573 [Acyrthosiphon pisum] Length = 176 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 19/160 (11%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT + +V++ +EP + L G+ + + Sbjct: 15 VEGNVGSGKTTFLEQFADC-----PNVYLAKEPVHKWQDVRGHNFL---GLMYEDPKRWS 66 Query: 69 IVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-------LDS 119 F + R + RP L I + +R + S+ E +L LD+ Sbjct: 67 FAFQSIVQRTMLELHQTRPKLPGQNIKIMERSIYSARNIFVENLYKDNLMAAPEYSVLDA 126 Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 ++ + D I L +I +R++ R E Sbjct: 127 WYNWLIENVQIESDLIIYLRTDPEIAYQRIKTRNRSEEKN 166 >gi|195941407|ref|ZP_03086789.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 (dck) [Borrelia burgdorferi 80a] Length = 200 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L + L+ V E + F + Sbjct: 2 IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKNKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P + LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|328714167|ref|XP_001947637.2| PREDICTED: deoxynucleoside kinase-like [Acyrthosiphon pisum] Length = 268 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 19/160 (11%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GKTT + +V++ +EP + L G+ + + Sbjct: 77 VEGNVGSGKTTFLEQFADC-----PNVYLAKEPVHKWQDVRGHNFL---GLMYEDPKRWS 128 Query: 69 IVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-------LDS 119 F + R + RP L I + +R + S+ E +L LD+ Sbjct: 129 FAFQSIVQRTMLELHQTRPKLPGQNIKIMERSIYSARNIFVENLYKDNLMAAPEYSVLDA 188 Query: 120 LQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 ++ + D I L +I +R++ R E Sbjct: 189 WYNWLIENVQIESDLIIYLRTDPEIAYQRIKTRNRSEEKN 228 >gi|54308798|ref|YP_129818.1| putative hymidylate kinase [Photobacterium profundum SS9] gi|46913228|emb|CAG20016.1| putative hymidylate kinase [Photobacterium profundum SS9] Length = 186 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 4/68 (5%) Query: 87 LMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEISVQEVMPDCTIILDLPVDIGL 144 L G ++ DR++ S+ AYQ D+L I+ + ++PD + + + Sbjct: 58 LESGD-VILDRYIFSTLAYQTIMLEEDTVKKIFDALN-IAKKILLPDVIVFVKADAETIN 115 Query: 145 KRVQNRYS 152 R++ R Sbjct: 116 SRIEARDG 123 >gi|315172305|gb|EFU16322.1| shikimate kinase [Enterococcus faecalis TX1346] Length = 168 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGLENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR++ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIINEILQQLKE 168 >gi|307692362|ref|ZP_07634599.1| guanylate kinase [Ruminococcaceae bacterium D16] Length = 205 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 66/211 (31%), Gaps = 42/211 (19%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G I G G GK+T I+ L ++ V + TR+P + + + Sbjct: 7 KGQLIVLSGPSGVGKSTVIAELLGQRNNIHFSVSYTTRQPRVGEQNGVNYNFVSREEFEG 66 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + +A ++ VI+ L G +L D QG Sbjct: 67 MIQRDELLEYAEYVNNYYGTSLKVIQEKLDAGIDVLLD------IEVQGAAKVRSRC--- 117 Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 PD I +P + +R+ R++ E E K RQ Sbjct: 118 -----------PDALFIFIIPPSFEELSRRLHGRHTDSEEVIQGRLE--------KARQE 158 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 +I++ +++ V+ + I Sbjct: 159 AKEISKYD---YLVIN-----DKVSNAVSEI 181 >gi|158314448|ref|YP_001506956.1| hypothetical protein Franean1_2620 [Frankia sp. EAN1pec] gi|158109853|gb|ABW12050.1| hypothetical protein Franean1_2620 [Frankia sp. EAN1pec] Length = 204 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 38/102 (37%), Gaps = 8/102 (7%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ EG +GKTT L + + + V EP +++ + F E Sbjct: 8 VAVEGTHASGKTTLTHALAAYYRERGVHVACVPEPARNSP--FIEEIVVHGRGE-FDLET 64 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 E +FAA + + +++ D+ + + AY Sbjct: 65 EVDLFAAQLSSQLRTA-----RQHTMIIADKTIANVLAYAWL 101 >gi|298481043|ref|ZP_06999237.1| hypothetical protein HMPREF0106_01482 [Bacteroides sp. D22] gi|298272617|gb|EFI14184.1| hypothetical protein HMPREF0106_01482 [Bacteroides sp. D22] Length = 208 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 32/219 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCG---VDE 61 I GI+G+GK+T I+ + L+ + V R A +L +E Sbjct: 5 IIISGIDGSGKSTIINETQMALEAEGKKVGYIWLRFNHYLTKGMHAIARVLGLSVKVHNE 64 Query: 62 FGAEAEAIVF----------AAARLDHVENVIRP-ALMEGK-ILLCDRFLDSSYAYQGER 109 G + ++ LD + ++ + +GK ++CDR++ Sbjct: 65 MGDVWQHRLYKNQVFCSLYILTTYLDSWMSRLKYNKMAKGKDTVICDRWITDILV-DLAT 123 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + FLDS + + + I+ + R+ E+ E + Sbjct: 124 KTHRKDFLDS--RWAKRFMK----IL----PEGA--RMFVVVRNTEALIDCRLENRVDPN 171 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 E R I+ D+ + +VD+ + + I++ + Sbjct: 172 FEFRLGIYEDLCKKH--YVTVVDNNGTIANSVKQIIDRL 208 >gi|297801048|ref|XP_002868408.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297314244|gb|EFH44667.1| adenylate kinase family protein [Arabidopsis lyrata subsp. lyrata] Length = 595 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 72/240 (30%), Gaps = 49/240 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T L+ + D+ GT + A+ + + Sbjct: 80 ISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSAGTDIGKRAKEFM---NSGRLVPD 136 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 I A RL R E L D F R +Q LD L Sbjct: 137 EIVIAMVAGRL------SREDAKEHGW-LLDGF---------PRSFAQAQSLDKLN---- 176 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171 V PD ++LD+P +I + R R + + + E Sbjct: 177 --VKPDIFLLLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEE 234 Query: 172 KRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 K + QI+ I D +D+ + V ++ ++ KR+ K+D Sbjct: 235 KVKARLQIYKQNSEAIISAYSDVMVKIDANRPKEVVFEETQTLLSQIQLKRMIKTGKKRD 294 >gi|15594584|ref|NP_212373.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 (dck) [Borrelia burgdorferi B31] gi|2688138|gb|AAC66630.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 (dck) [Borrelia burgdorferi B31] Length = 205 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L + L+ V E F + Sbjct: 7 IVIEGLIGVGKTTLGNILSKELE-----VPFYSELNNDFTLAVLDKFYKDKSRWAFPVQ- 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 61 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 113 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P + LD +D +R++NR E DY E Sbjct: 114 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 158 >gi|39939223|ref|NP_950989.1| guanylate kinase [Onion yellows phytoplasma OY-M] gi|45477018|sp|P60554|KGUA_ONYPE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|39722332|dbj|BAD04822.1| guanylate kinase [Onion yellows phytoplasma OY-M] Length = 212 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 68/221 (30%), Gaps = 56/221 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLS 56 GL I G G GK T L + N++ TR+P H L+ Sbjct: 5 KKGLLIVLSGPSGVGKATVRKAL---FEMTNHNFVYSVSATTRKPRPGEQDGKDYH-FLT 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 E G E + A +DH + I+ L +GK + Sbjct: 61 KEEFEKGIENNCFLEWAKFIDHYYGTPKKQIQDFLKQGKEV------------------- 101 Query: 113 QHLFLDSLQEISVQEVM---PDCTIILDLPVDI-GL-KRVQNRYSLRESACLDYFERKDV 167 FL+ E + P+ I +P + L R++ R + +E+ + + Sbjct: 102 ---FLEIEVEGATHLRKKRIPNTVFIFLVPPEKKALYDRLKKRGTEQEANIAKRIAKANN 158 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 H +A +V+ VA I+ Sbjct: 159 EFH---------LAHKYD--YIVVN-----DEVANAADRII 183 >gi|289192229|ref|YP_003458170.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus sp. FS406-22] gi|288938679|gb|ADC69434.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus sp. FS406-22] Length = 248 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 59/215 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62 + I G+ G GK+T L + L R N D+ V ++ R + +EF Sbjct: 1 MLIILTGLPGVGKSTFSKNLAKILSRYNIDIIVL-------GSDLIRESFPIWKETYEEF 53 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +A + I AL + ++ D D++Y Y R ++ + Sbjct: 54 IRKASYGL------------IDSAL-KHYWVIVD---DTNY-YNSMRRDLINIAKKYNKN 96 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ I L P+++ +KR R E+ + +K + F Sbjct: 97 YAI--------IYLKAPLEVLIKRNIERG-----------EKIPNDVIKKMYEKF----- 132 Query: 183 NQPDR-------CHIVDSAHSFQSVATNILNIVWE 210 ++P R ++D+ +I + E Sbjct: 133 DEPGRKYKWDKPFLVIDTTRDID--FNDIAKKLIE 165 >gi|115465958|ref|NP_001056578.1| Os06g0109600 [Oryza sativa Japonica Group] gi|55296103|dbj|BAD67693.1| putative Uridylate kinase [Oryza sativa Japonica Group] gi|55296178|dbj|BAD67896.1| putative Uridylate kinase [Oryza sativa Japonica Group] gi|113594618|dbj|BAF18492.1| Os06g0109600 [Oryza sativa Japonica Group] gi|215695023|dbj|BAG90214.1| unnamed protein product [Oryza sativa Japonica Group] gi|218197428|gb|EEC79855.1| hypothetical protein OsI_21335 [Oryza sativa Indica Group] gi|222634831|gb|EEE64963.1| hypothetical protein OsJ_19856 [Oryza sativa Japonica Group] Length = 243 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 35/211 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G G+GK T + + + + + E L++ G Sbjct: 26 GGPGSGKGTQCAKIVKQFGFTHLSAGDLLREEAKYDTEQGTMIKNLMNEGKLVSSDLIVK 85 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 ++F A R G D+FL + E + + + Sbjct: 86 LLFKAMR------------ESGN----DKFLVDGFPRNEENRHAYENIIH---------I 120 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQP 185 P+ + +D + +R+ NR R+ +D R+ + ++ Q + Sbjct: 121 EPEFLLFIDCSKEEMERRILNRNQGRDDDNIDTIRRRFDVFQQQTLPVIQYYEKR----- 175 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + VD V ++ I +L +++ Sbjct: 176 GKLRKVDGNRQVDEVFEDVKAIFAQLNNQKI 206 >gi|229545817|ref|ZP_04434542.1| shikimate kinase [Enterococcus faecalis TX1322] gi|255975847|ref|ZP_05426433.1| shikimate kinase [Enterococcus faecalis T2] gi|256853131|ref|ZP_05558501.1| shikimate kinase [Enterococcus faecalis T8] gi|256958986|ref|ZP_05563157.1| shikimate kinase [Enterococcus faecalis DS5] gi|257079017|ref|ZP_05573378.1| shikimate kinase [Enterococcus faecalis JH1] gi|257085177|ref|ZP_05579538.1| shikimate kinase [Enterococcus faecalis Fly1] gi|257419302|ref|ZP_05596296.1| predicted protein [Enterococcus faecalis T11] gi|294781657|ref|ZP_06746992.1| shikimate kinase [Enterococcus faecalis PC1.1] gi|307271012|ref|ZP_07552295.1| shikimate kinase [Enterococcus faecalis TX4248] gi|307274955|ref|ZP_07556118.1| shikimate kinase [Enterococcus faecalis TX2134] gi|307278068|ref|ZP_07559152.1| shikimate kinase [Enterococcus faecalis TX0860] gi|307289112|ref|ZP_07569068.1| shikimate kinase [Enterococcus faecalis TX0109] gi|307291990|ref|ZP_07571859.1| shikimate kinase [Enterococcus faecalis TX0411] gi|312900766|ref|ZP_07760063.1| shikimate kinase [Enterococcus faecalis TX0470] gi|229309129|gb|EEN75116.1| shikimate kinase [Enterococcus faecalis TX1322] gi|255968719|gb|EET99341.1| shikimate kinase [Enterococcus faecalis T2] gi|256711590|gb|EEU26628.1| shikimate kinase [Enterococcus faecalis T8] gi|256949482|gb|EEU66114.1| shikimate kinase [Enterococcus faecalis DS5] gi|256987047|gb|EEU74349.1| shikimate kinase [Enterococcus faecalis JH1] gi|256993207|gb|EEU80509.1| shikimate kinase [Enterococcus faecalis Fly1] gi|257161130|gb|EEU91090.1| predicted protein [Enterococcus faecalis T11] gi|294451209|gb|EFG19676.1| shikimate kinase [Enterococcus faecalis PC1.1] gi|306496988|gb|EFM66536.1| shikimate kinase [Enterococcus faecalis TX0411] gi|306499821|gb|EFM69182.1| shikimate kinase [Enterococcus faecalis TX0109] gi|306505465|gb|EFM74651.1| shikimate kinase [Enterococcus faecalis TX0860] gi|306508403|gb|EFM77510.1| shikimate kinase [Enterococcus faecalis TX2134] gi|306512510|gb|EFM81159.1| shikimate kinase [Enterococcus faecalis TX4248] gi|311292247|gb|EFQ70803.1| shikimate kinase [Enterococcus faecalis TX0470] gi|315029379|gb|EFT41311.1| shikimate kinase [Enterococcus faecalis TX4000] gi|315033975|gb|EFT45907.1| shikimate kinase [Enterococcus faecalis TX0017] gi|315036984|gb|EFT48916.1| shikimate kinase [Enterococcus faecalis TX0027] gi|315164021|gb|EFU08038.1| shikimate kinase [Enterococcus faecalis TX1302] gi|323480730|gb|ADX80169.1| shikimate kinase [Enterococcus faecalis 62] Length = 168 Score = 51.2 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR+ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIAEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIINEILQQLKE 168 >gi|322795217|gb|EFZ18039.1| hypothetical protein SINV_15235 [Solenopsis invicta] Length = 259 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 70/220 (31%), Gaps = 48/220 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + EG G+GKTT +S K+F L+ V + R+ GT E + Sbjct: 26 VCVEGNIGSGKTTFLSHFKKFDNVTVLEE---PVELWRDVSGTNLLELMYN--------- 73 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKI----LLCDRFLDSSYAY---QGERDSSQH 114 A +F + L K + +R + S+ + R+ + Sbjct: 74 -EPSRYAFLF-----QSYVQLTMLQLHTCKTPSPYKIMERSVYSAMCFVENLKRRNVLRD 127 Query: 115 LFLDSLQEI------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + + L++ + + D + L + +R++ R E+A + Sbjct: 128 VEVTVLEDWYDWCLKNANNIETDLIVYLRTTPETVYERMKQRGRKEENAV-------SLE 180 Query: 169 IHEKRRQI-----FLDIARNQPDRCHIVDSAHSFQSVATN 203 ++ QI + + P ++ + Sbjct: 181 YLKQIHQIHDDWLYHQTLKPVPSPIITINGDRELNEMVEE 220 >gi|297566843|ref|YP_003685815.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946] gi|296851292|gb|ADH64307.1| deoxynucleoside kinase [Meiothermus silvanus DSM 9946] Length = 214 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 68/211 (32%), Gaps = 42/211 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63 ++I+ G G+GK++ +L+ E G P EA L+ + G Sbjct: 1 MYIAIAGNIGSGKSSLTALMAE-------------EYGFRPVYEAVDENPYLADFYADMG 47 Query: 64 AEA---EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLD-----SSYAYQGERDSSQ 113 A + A H+E V ++ DR F D + QG Sbjct: 48 RWAFPSQVFFLAKRLKQHLEEV-----NRHVRVVQDRTVFEDAAIFACNLYRQGHLSERD 102 Query: 114 HLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L E I+ PD I + + KR+ R E + + R ++E Sbjct: 103 WQTYQQLYEGIAPALRKPDLLIYIRASLPTLKKRIAKRGREYERGIPEEYLRTLNELYES 162 Query: 173 RRQIF------------LDIARNQPDRCHIV 191 Q + LD + DR ++ Sbjct: 163 WVQAYALSPKLVLEGDRLDFVESARDRLKLI 193 >gi|67970435|dbj|BAE01560.1| unnamed protein product [Macaca fascicularis] Length = 260 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 87/239 (36%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 24 ISIEGNIAAGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKNGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L+ + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLLFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 142 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P I D F+ +++ V E + Sbjct: 202 LEYLEKLHYKHESWLLHRTLKTDF-DYLQEVP--ILIPDVNEDFKDKHESLVEKVKEFL 257 >gi|157311054|ref|YP_001469049.1| gp051 [Lactococcus phage KSY1] gi|108861394|gb|ABG21593.1| gp051 [Lactococcus phage KSY1] Length = 287 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 78/230 (33%), Gaps = 49/230 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63 + I+ G GAGK+ ++L L D EP P E Sbjct: 1 MLITAAGKIGAGKSALTAMLADVL-----DTKAIYEPIDDNPLLEKFYE----------D 45 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGE----------RDS 111 + VF + +I+ AL++ +L DR + DS + Q R Sbjct: 46 KDTYGFVFQIDMISRRFELIQQALLQNNSVL-DRSILEDSIFLDQLFLEGHVNKYEHRAY 104 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKD 166 + L L+ + + PD + +D+P D ++R+ R E DYF Sbjct: 105 HKLLDRMMLELDVLPKKRPDLLVYIDVPFDKEIERINKRARAFEKVSEGTELWDYF---- 160 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDS--------AHSFQSVATNILNIV 208 +H K +++ P + +D+ V NI+ + Sbjct: 161 -AMHSKMYDKWINEFNECP--VYTIDAMKYDYVENEQDRIEVLENIVAKL 207 >gi|149037471|gb|EDL91902.1| deoxythymidylate kinase (predicted), isoform CRA_d [Rattus norvegicus] Length = 126 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 10/97 (10%) Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LD ++ V PD + + L+ + R L+ +E E+ Sbjct: 28 LDWCKQPDVGLPKPD--------LILFLQLQLLDAASRGEFGLERYE--TGTFQEQVLLC 77 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 F + + +VD++ S + V I + + +Q Sbjct: 78 FQQLMSEKNLNWKVVDASKSIEDVHEEIRALSEDAIQ 114 >gi|91088145|ref|XP_971294.1| PREDICTED: similar to putative deoxynucleoside kinase [Tribolium castaneum] Length = 217 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 28/213 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +S EG GAGK+T I R ++ + R G LL + Sbjct: 11 VSIEGNIGAGKSTLIDYFSRISGIETYGEPIETWRNVNGDN--------LLDLMYSDIAQ 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILL------CDRFLDSSYAY-QGERDSSQHLFL 117 + +P + + +RF A G + L Sbjct: 63 WLKVFQNFVQLSRLKVQTSKPKNPNTTVQIFERSLQNNRFCFVELARKGGYLSGPDYAVL 122 Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRR 174 D + + D + L ++ +R++ R E LDY +H+ Sbjct: 123 DEWYQWIQNNININLDLIVYLRSTPEVVYERIKARGRPEEKKISLDYL----KDLHQSHE 178 Query: 175 QIFLDIARNQPDR-CHIVDSAHSFQSVATNILN 206 + + + ++D+ + + V + Sbjct: 179 D---WLMKEDSETPVLVMDANQTLEEVREQLKQ 208 >gi|62955057|ref|NP_001017540.1| adenylate kinase 5, like [Danio rerio] gi|62089505|gb|AAH92184.1| Zgc:113368 [Danio rerio] gi|169146141|emb|CAQ13849.1| novel protein (zgc:113368) [Danio rerio] Length = 335 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 46/219 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI G G+GK T + + L+ V E R+ LL + E Sbjct: 138 FII--GGPGSGKGTQTAKIA--LRYDFEHV---------SVGEILRNQLLHHAPSDRKWE 184 Query: 66 AEAIVFAAARL--------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A + A L + + I+ +G I+ D F + Sbjct: 185 LIAQIIANGELAPQETTIEELKQQFIKKQDAKGFIV--DGF---------------PREI 227 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQ 175 Q PD I+L +R++ R S + + E++ Sbjct: 228 SQAFTFEEQIGSPDLVILLACSNQQLRQRLEKRASQQGRPDDNSHAIEKRLDTFKHNIN- 286 Query: 176 IFLDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELV 212 IA+ +R VD+ + T+I IV E + Sbjct: 287 ---LIAKYYQERGLIVRVDADREEDDIFTDISAIVKERL 322 >gi|219685842|ref|ZP_03540650.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii Far04] gi|219672616|gb|EED29647.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii Far04] Length = 200 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L L+ V E F + Sbjct: 2 IVIEGLIGVGKTTLGNILSNELK-----VPFYSELNNDFTLAILDKFYRDKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P I LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|74151963|dbj|BAE32020.1| unnamed protein product [Mus musculus] Length = 420 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 221 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 273 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 274 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 326 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 327 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 378 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 379 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 416 >gi|320100638|ref|YP_004176230.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM 2162] gi|319752990|gb|ADV64748.1| hypothetical protein Desmu_0430 [Desulfurococcus mucosus DSM 2162] Length = 221 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/35 (51%), Positives = 22/35 (62%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 G I F G+EGAGKTTHI LL L+++ V T Sbjct: 2 GRVIVFAGLEGAGKTTHIRLLAIRLKKRGLRVRTT 36 >gi|219684553|ref|ZP_03539496.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii PBr] gi|219671915|gb|EED28969.1| deoxyguanosine/deoxyadenosine kinase [Borrelia garinii PBr] Length = 200 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L L+ V E F + Sbjct: 2 IVIEGLIGVGKTTLGNILSNELK-----VPFYSELNNDFTLAVLDKFYRDKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P I LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|330943544|gb|EGH45882.1| thymidylate kinase [Pseudomonas syringae pv. pisi str. 1704B] Length = 44 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%) Query: 29 QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 + + V +TREPGGTP AE R +LL+ + A+ + ++ Sbjct: 2 RAQGVQVLLTREPGGTPLAERIRELLLAPSDEAMSADTDLLL 43 >gi|51598500|ref|YP_072688.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia garinii PBi] gi|51573071|gb|AAU07096.1| deoxyguanosine/deoxyadenosine kinase(I) subunit 2 [Borrelia garinii PBi] Length = 200 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L L+ V E F + Sbjct: 2 IVIEGLIGVGKTTLGNILSNELK-----VPFYSELNNDFTLAVLDKFYRDKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFASLLNCDGHISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P I LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLIYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|307264795|ref|ZP_07546357.1| guanylate kinase [Thermoanaerobacter wiegelii Rt8.B1] gi|306920053|gb|EFN50265.1| guanylate kinase [Thermoanaerobacter wiegelii Rt8.B1] Length = 207 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G GAGK T L + + TR+P E + S Sbjct: 6 KKGLLIVLSGPSGAGKGTICKALMEKEKNLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E E ++ + A H ++ + L EG ++ L Sbjct: 65 EKMIENDSFLEWAKVYGHYYGTPKDFVLKNLEEGNDVV--------------------LE 104 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +D + ++E P+ I LP + R++ R + E + F+ Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ +++ S + I I+ Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIRAII 185 >gi|270011851|gb|EFA08299.1| hypothetical protein TcasGA2_TC005934 [Tribolium castaneum] Length = 221 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 28/213 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +S EG GAGK+T I R ++ + R G LL + Sbjct: 11 VSIEGNIGAGKSTLIDYFSRISGIETYGEPIETWRNVNGDN--------LLDLMYSDIAQ 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILL------CDRFLDSSYAY-QGERDSSQHLFL 117 + +P + + +RF A G + L Sbjct: 63 WLKVFQNFVQLSRLKVQTSKPKNPNTTVQIFERSLQNNRFCFVELARKGGYLSGPDYAVL 122 Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRR 174 D + + D + L ++ +R++ R E LDY +H+ Sbjct: 123 DEWYQWIQNNININLDLIVYLRSTPEVVYERIKARGRPEEKKISLDYL----KDLHQSHE 178 Query: 175 QIFLDIARNQPDR-CHIVDSAHSFQSVATNILN 206 + + + ++D+ + + V + Sbjct: 179 D---WLMKEDSETPVLVMDANQTLEEVREQLKQ 208 >gi|240103245|ref|YP_002959554.1| putative kinase [Thermococcus gammatolerans EJ3] gi|259493980|sp|C5A628|KAD6_THEGJ RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|239910799|gb|ACS33690.1| Nucleotide kinase, shikimate kinase related [Thermococcus gammatolerans EJ3] Length = 177 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 69/214 (32%), Gaps = 55/214 (25%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G GKTT LL L Y+ R+ A + DE Sbjct: 1 MIIAVTGTPGVGKTTVSKLLAEKL---GYEYVSLRDY-------AIEKGIGEMKGDELEV 50 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + + + R +GK ++ D L Sbjct: 51 EVDELTYNFERD-----------FKGKNVVVDGHL------------------------- 74 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + D ++L + +R+ R RE + E + V + L A + Sbjct: 75 SHFLNADLVVVLRAHPRLIGERLTERGYSREKVGEN-VEAELVDVI-------LVEALEE 126 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + VD+ + + V IL ++ + V+KRV Sbjct: 127 NENVIEVDTTGKTPEEVVNEILELIEKGVKKRVG 160 >gi|308159065|gb|EFO61617.1| Hypothetical protein GLP15_4359 [Giardia lamblia P15] Length = 342 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 21/203 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I +G GAGK+T LK++L ++ + E + L Sbjct: 65 IVVDGPIGAGKSTFCRHLKKYLIDHGFEATIIEEAVADKRFGENGGITLEEYYK--NPRE 122 Query: 67 EAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHL 115 A F A + + ++ DR+L S+ A+ G Q Sbjct: 123 LAFQFQEQVVHALGKQLLHCRFAEEYQQYDFIIFDRWLPSASAFILFKMRDGYITKEQGQ 182 Query: 116 FLDSL--QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-----ESACLDYFERKDVM 168 +L L + ++P I + I +++R S E LD R+ Sbjct: 183 YLHYLIDHYMLRAGILPAFHIRFAIDPSICEDHIKDRASDDPHRLCELEALDTI-RQTND 241 Query: 169 IHEKRRQIFLDIARNQPDRCHIV 191 + R ++ + +P + Sbjct: 242 FLLEHRGVYNPLVAIEPGNVRTI 264 >gi|256811473|ref|YP_003128842.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus fervens AG86] gi|256794673|gb|ACV25342.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus fervens AG86] Length = 248 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 70/211 (33%), Gaps = 51/211 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61 + I G+ GAGK+T L + L + N DV V ++ R + + Sbjct: 1 MLIILTGLPGAGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPIWKEKYEEF 53 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +++ A ++ ++ D D++Y Y R ++ + Sbjct: 54 IRKATYSLIDNA--------------LKDYWVIVD---DTNY-YNSMRRDLINIAKKYNK 95 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ I L P+D+ ++R R E+ + +K + F + Sbjct: 96 NYAI--------IYLKAPLDVLIERNIMRG-----------EKIPNEVIKKMYEKFDEPG 136 Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210 + + +D+ NI + E Sbjct: 137 KKYKWDEPFLTIDTTKDID--FGNITKKLIE 165 >gi|15673140|ref|NP_267314.1| deoxynucleoside kinase [Lactococcus lactis subsp. lactis Il1403] gi|12724122|gb|AAK05256.1|AE006348_1 deoxynucleoside kinase [Lactococcus lactis subsp. lactis Il1403] gi|326406705|gb|ADZ63776.1| deoxyguanosine kinase [Lactococcus lactis subsp. lactis CV56] Length = 212 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 70/233 (30%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ L L+ P + + Sbjct: 2 IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117 A + L+ I+ A + +L DR + + Y+ + L + Sbjct: 48 YAFLLQIYFLNKRFESIKMAYRQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106 Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L+E+ + + PD + +D+ + L R+ R FE+ + E + Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156 Query: 175 QIFLDIARNQPDRCH--------IVDS------AHS--FQSVATNILNIVWEL 211 + + PD +D + V I N + +L Sbjct: 157 DYYAQVHDEYPDWYKNYNISPKLRIDGDSIDFVNNPEHLDEVLGQIDNELKKL 209 >gi|29376130|ref|NP_815284.1| shikimate kinase [Enterococcus faecalis V583] gi|227518758|ref|ZP_03948807.1| shikimate kinase [Enterococcus faecalis TX0104] gi|227553369|ref|ZP_03983418.1| shikimate kinase [Enterococcus faecalis HH22] gi|229550009|ref|ZP_04438734.1| shikimate kinase [Enterococcus faecalis ATCC 29200] gi|255972791|ref|ZP_05423377.1| predicted protein [Enterococcus faecalis T1] gi|256762495|ref|ZP_05503075.1| shikimate kinase [Enterococcus faecalis T3] gi|257422613|ref|ZP_05599603.1| shikimate kinase [Enterococcus faecalis X98] gi|312951500|ref|ZP_07770396.1| shikimate kinase [Enterococcus faecalis TX0102] gi|81585167|sp|Q834S1|AROK_ENTFA RecName: Full=Shikimate kinase; Short=SK gi|29343592|gb|AAO81354.1| shikimate kinase [Enterococcus faecalis V583] gi|227073753|gb|EEI11716.1| shikimate kinase [Enterococcus faecalis TX0104] gi|227177494|gb|EEI58466.1| shikimate kinase [Enterococcus faecalis HH22] gi|229304922|gb|EEN70918.1| shikimate kinase [Enterococcus faecalis ATCC 29200] gi|255963809|gb|EET96285.1| predicted protein [Enterococcus faecalis T1] gi|256683746|gb|EEU23441.1| shikimate kinase [Enterococcus faecalis T3] gi|257164437|gb|EEU94397.1| shikimate kinase [Enterococcus faecalis X98] gi|310630466|gb|EFQ13749.1| shikimate kinase [Enterococcus faecalis TX0102] gi|315152477|gb|EFT96493.1| shikimate kinase [Enterococcus faecalis TX0031] gi|315155755|gb|EFT99771.1| shikimate kinase [Enterococcus faecalis TX0043] gi|315158079|gb|EFU02096.1| shikimate kinase [Enterococcus faecalis TX0312] gi|315575861|gb|EFU88052.1| shikimate kinase [Enterococcus faecalis TX0309B] gi|315580513|gb|EFU92704.1| shikimate kinase [Enterococcus faecalis TX0309A] gi|327535139|gb|AEA93973.1| shikimate kinase [Enterococcus faecalis OG1RF] Length = 168 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR+ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRITEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIINEILQQLKE 168 >gi|254493569|ref|ZP_05106740.1| predicted protein [Neisseria gonorrhoeae 1291] gi|268594628|ref|ZP_06128795.1| predicted protein [Neisseria gonorrhoeae 35/02] gi|268598776|ref|ZP_06132943.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|268601135|ref|ZP_06135302.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|268603453|ref|ZP_06137620.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|268681933|ref|ZP_06148795.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|268684148|ref|ZP_06151010.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|268686401|ref|ZP_06153263.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|291044043|ref|ZP_06569759.1| predicted protein [Neisseria gonorrhoeae DGI2] gi|226512609|gb|EEH61954.1| predicted protein [Neisseria gonorrhoeae 1291] gi|268548017|gb|EEZ43435.1| predicted protein [Neisseria gonorrhoeae 35/02] gi|268582907|gb|EEZ47583.1| thymidylate kinase [Neisseria gonorrhoeae MS11] gi|268585266|gb|EEZ49942.1| thymidylate kinase [Neisseria gonorrhoeae PID18] gi|268587584|gb|EEZ52260.1| thymidylate kinase [Neisseria gonorrhoeae PID1] gi|268622217|gb|EEZ54617.1| thymidylate kinase [Neisseria gonorrhoeae PID332] gi|268624432|gb|EEZ56832.1| thymidylate kinase [Neisseria gonorrhoeae SK-92-679] gi|268626685|gb|EEZ59085.1| thymidylate kinase [Neisseria gonorrhoeae SK-93-1035] gi|291012506|gb|EFE04495.1| predicted protein [Neisseria gonorrhoeae DGI2] Length = 80 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 7/44 (15%), Positives = 22/44 (50%), Gaps = 1/44 (2%) Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 D+ + R +L++ ++ P + ++++ + + V I + V Sbjct: 2 DLDFFHRTRARYLELVKDNP-KAVVINAEQTIELVQAEIESAVK 44 >gi|281342761|gb|EFB18345.1| hypothetical protein PANDA_010124 [Ailuropoda melanoleuca] Length = 329 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 54/195 (27%), Gaps = 40/195 (20%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P Sbjct: 40 QKGKFPVIAIEGLDATGKTTVTQSVSDSLKA----VLLKSPPACISQWRKI--------F 87 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLD 118 D+ ++ + + + ++ DR+ S+ Y + + L Sbjct: 88 DDEPTIIRRAFYSLGNYIVASEIAKESSKSP--VIVDRYWHSTATYAIATEVTGGLQHLP 145 Query: 119 SLQEISVQEVMPDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDV 167 Q D + + + R++ R R + E V Sbjct: 146 PAHHPIYQWPR-------DLLKPDLVLLLTVSPEERMHRIEGRGMERTREEAE-LEANSV 197 Query: 168 MIH----EKRRQIFL 178 + RQ FL Sbjct: 198 FRQKYVSRRARQGFL 212 >gi|74219719|dbj|BAE29625.1| unnamed protein product [Mus musculus] Length = 420 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 221 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 273 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 274 IIRRAFYSLGNYLVASGIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 326 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 327 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 378 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 379 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 416 >gi|26342525|dbj|BAB23961.2| unnamed protein product [Mus musculus] Length = 332 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 20/168 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58 I+ +G +GK + + L K+Y + T + S Sbjct: 73 ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 132 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108 D ++ ++ A+RL + + L G+ ++ +R + S + + QG Sbjct: 133 DPKSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGY 191 Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 192 IRKQCVDHYNEIERLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 239 >gi|20807954|ref|NP_623125.1| guanylate kinase [Thermoanaerobacter tengcongensis MB4] gi|22095790|sp|Q8R9S6|KGUA_THETN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|20516525|gb|AAM24729.1| Guanylate kinase [Thermoanaerobacter tengcongensis MB4] Length = 206 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G GAGK T L + + TR+P + + S Sbjct: 5 KQGLLIVISGPSGAGKGTICKALIEKEKDLKLSISATTRQPRAGEV-DGKNYFFKSEEEF 63 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E +A + A DH + + L EG ++ L Sbjct: 64 KRMIEEDAFLEWAKVYDHYYGTPKEFVLKNLEEGNDVV--------------------LE 103 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +D + V+E P+ I LP + R++ R + E + F+ Sbjct: 104 IDIQGALKVKEKFPEGVFIFILPPSMEELRNRIKKRGTESEEEIIKRFKS---------- 153 Query: 175 QIFLDIARNQPDRCHIV--DSAHSFQSVATNILN 206 + ++ ++ D + + + I+ Sbjct: 154 -AYEELNYVSKYNYVVINDDVDRAVEKIRAIIIA 186 >gi|328950284|ref|YP_004367619.1| Deoxyadenosine kinase [Marinithermus hydrothermalis DSM 14884] gi|328450608|gb|AEB11509.1| Deoxyadenosine kinase [Marinithermus hydrothermalis DSM 14884] Length = 209 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 14/171 (8%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ G G+GK+T ++L + V P R V Sbjct: 1 MYIAIAGNIGSGKSTLTAMLAERYRLHPVYEAVEENPYLEDFYRDMRAWAFHSQV----- 55 Query: 65 EAEAIVFAAARL-DHVENVI-RPALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLDSLQ 121 F A RL H++ + R +++ + + D F+ + + QG +L Sbjct: 56 -----FFLARRLEQHLKEINGRKRVVQDRTIFEDAFIFAKNLHRQGYLSERDWRTYLALY 110 Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 E I+ MPD + + + R+ R E A D + + ++E Sbjct: 111 EGIAPALRMPDRLVYIRASLPTLRARIAKRGRTYERAIPDAYLQALNELYE 161 >gi|17227564|ref|NP_484112.1| adenylate kinase [Nostoc sp. PCC 7120] gi|21263761|sp|Q8Z0M3|KAD2_ANASP RecName: Full=Probable adenylate kinase 2; Short=AK 2; AltName: Full=ATP-AMP transphosphorylase 2 gi|17135046|dbj|BAB77592.1| adenylate kinase [Nostoc sp. PCC 7120] Length = 184 Score = 50.8 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 29/204 (14%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK+T L L E E R + A+ Sbjct: 4 VILGGSGSGKSTQAQRLCSHL-----------EITQISTGEILREAISHLSELGRHAQPY 52 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 I + + +IR L + ++ D ++ Y + LD L Sbjct: 53 MIKGELVPDEMIIELIRLRLKKSDVI--DGWVLEGYPRTAFQAEELDFLLDEL------G 104 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQ 184 D I L +P + + R R + + +R+ + +++ + + Sbjct: 105 QKLDWAIYLQVPEAVMVSRSLGRSLPDDQ--PEIVQRRVEIFYDRTVPILEYYDRR---- 158 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 R ++ S + V +IL ++ Sbjct: 159 -RRLLTINGDQSPELVLQSILKLL 181 >gi|168027631|ref|XP_001766333.1| predicted protein [Physcomitrella patens subsp. patens] gi|162682547|gb|EDQ68965.1| predicted protein [Physcomitrella patens subsp. patens] Length = 350 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 37/242 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 +SFEG G GK+T + LL+ + + + +EP + +L + Sbjct: 81 VSFEGNIGVGKSTILKLLQSHPRLQGKTEVL-QEPIWEWQNVKGTGLNMLDAFYKDPKRY 139 Query: 66 AEA---IVFAAARLDH---VENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLD 118 A VF L + L+ + +L DR + + QG +S + D Sbjct: 140 AYLFQSFVFTTRFLQQNTAAKESTAALLLMERSVLTDRCVFVKTCTEQGYFNSLESAAYD 199 Query: 119 SLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERK--------- 165 + + + V+P + L + R++ R E+ L+Y + Sbjct: 200 AWYDGVVSTLPGVVPHAFVYLRADPSVCYDRLKTRGRSEEAGVSLEYLQSLHSKHEKWFI 259 Query: 166 DVMIH--------EKRRQIFLDIARNQPDRCH-----IVDSAHSFQ--SVATNILNIVWE 210 D K + + N P +VD ++S + ++ + +V E Sbjct: 260 DSAFKGAGNGNWGGKSQAGYFFTHSNVPSVIKGRPVFVVDCSYSLEFGKLSEEVDRVVEE 319 Query: 211 LV 212 +V Sbjct: 320 IV 321 >gi|121600183|ref|YP_991854.1| deoxynucleoside kinase family protein [Burkholderia mallei SAVP1] gi|124383780|ref|YP_001027079.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC 10229] gi|126450071|ref|YP_001081730.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC 10247] gi|238562129|ref|ZP_04609907.1| deoxynucleoside kinase family protein [Burkholderia mallei GB8 horse 4] gi|251766686|ref|ZP_04819758.1| deoxynucleoside kinase family protein [Burkholderia mallei PRL-20] gi|254202590|ref|ZP_04908953.1| deoxynucleoside kinase family protein [Burkholderia mallei FMH] gi|121228993|gb|ABM51511.1| deoxynucleoside kinase family protein [Burkholderia mallei SAVP1] gi|124291800|gb|ABN01069.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC 10229] gi|126242941|gb|ABO06034.1| deoxynucleoside kinase family protein [Burkholderia mallei NCTC 10247] gi|147746837|gb|EDK53914.1| deoxynucleoside kinase family protein [Burkholderia mallei FMH] gi|238523239|gb|EEP86679.1| deoxynucleoside kinase family protein [Burkholderia mallei GB8 horse 4] gi|243064914|gb|EES47100.1| deoxynucleoside kinase family protein [Burkholderia mallei PRL-20] Length = 229 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 20 RYLAIEGPIGVGKTTFATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 72 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + I A ++ D F+ + +A D L+ Sbjct: 73 Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 128 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 168 >gi|54114922|gb|AAH27329.1| Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Mus musculus] gi|74142469|dbj|BAE31987.1| unnamed protein product [Mus musculus] gi|74151705|dbj|BAE29646.1| unnamed protein product [Mus musculus] gi|74178017|dbj|BAE29803.1| unnamed protein product [Mus musculus] gi|74181304|dbj|BAE29932.1| unnamed protein product [Mus musculus] Length = 420 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 221 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 273 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 274 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 326 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 327 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 378 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 379 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 416 >gi|307297650|ref|ZP_07577456.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916910|gb|EFN47292.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2] Length = 214 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 80/219 (36%), Gaps = 24/219 (10%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK++ SLL+ L + V P + F Sbjct: 10 GAGKSSLTSLLEETLGFRGVYEAVDENPFLEDFYSNMERWAFHSQ----------LFFLI 59 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDSSQ-HLFLDSLQEISV 125 R D ++ V+ EG ++L DR + + G D L+LD+ + +S Sbjct: 60 KRFDFLKRVVT----EGAVILQDRTIYEDVEIFARNLKLMGYIDERDWRLYLDTYETLSE 115 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR-RQIFLDIARN 183 PD + + ++ LKR++ R ES DY ER + + E R F Sbjct: 116 HLTAPDGIVYIKCTKNVLLKRIKKRGRGFESGVSEDYIERLNGLYEEWIGRVTFCRKLII 175 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 D+ V++A + V I EL+ S L S+ Sbjct: 176 DGDKYDFVENAQDREDVLRLISRFTAELMAGVQSKLFSR 214 >gi|329115895|ref|ZP_08244612.1| deoxyguanosine kinase [Streptococcus parauberis NCFD 2020] gi|326906300|gb|EGE53214.1| deoxyguanosine kinase [Streptococcus parauberis NCFD 2020] Length = 213 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 78/233 (33%), Gaps = 47/233 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L +V P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYE----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL-- 117 + A + L+ I+ A +L DR + + Y+ + L + Sbjct: 47 KKYAFLLQIFFLNKRFKSIKEAYKADNNIL-DRSIFEDELFLTLNYKNGNVTEAELEIYK 105 Query: 118 ----DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM---- 168 + L+E+ + + PD I +D+ + L+R++ R FE+ D Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFERMLERIEKRGRS--------FEQVDDNPSLE 157 Query: 169 -IHEKRRQIFLDIARNQPDRCH------IVDSAHSFQSVATNILNIVWELVQK 214 +++ + + N ++D + + +L +V E ++K Sbjct: 158 HYYQQVHGEYPEWYENYDVSPKMKINGDVLDFVQNEDDL-KRVLAMVDEKLKK 209 >gi|224531866|ref|ZP_03672498.1| deoxyguanosine/deoxyadenosine kinase [Borrelia valaisiana VS116] gi|224511331|gb|EEF81737.1| deoxyguanosine/deoxyadenosine kinase [Borrelia valaisiana VS116] Length = 200 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 21/165 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GKTT ++L + L+ V E F + Sbjct: 2 IVIEGLIGVGKTTLGNILSKELK-----VPFYSELNNDFTLAILGKFYKDKSRWAFPVQ- 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE-------RDSSQHLFLDS 119 I F R ++ V R +G + DR + + D +++D Sbjct: 56 --INFLNERFKLIKGVFR---TKGG--ILDRSIYGDCVFAALLNCDGYISDEEYKIYIDL 108 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 L + P + LD +D +R++NR E DY E Sbjct: 109 LDNMLEHSQRPSLLVYLDCSIDEVERRIKNRNRSFEMNIPRDYLE 153 >gi|149711435|ref|XP_001500629.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 39 kDa subunit [Equus caballus] Length = 355 Score = 50.8 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 20/168 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58 I+ +G +GK + L K++ T V LS Sbjct: 60 ITVDGNICSGKGKLAKEIAEKLGLKHFPEAGIHYADSTTGDGKPLDVELSGNCSLEKFYD 119 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108 D ++ ++ A+RL + + L G+ ++ +R + S + + QG Sbjct: 120 DPKSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGF 178 Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++++++ E + P I +D+PV R+Q R + E Sbjct: 179 IRKQCVDHYNEVKKVTICEYLPPHVVIYVDVPVPEIQSRIQKRGNPHE 226 >gi|313665475|ref|YP_004047346.1| deoxynucleoside kinase [Mycoplasma leachii PG50] gi|312949864|gb|ADR24460.1| deoxynucleoside kinase [Mycoplasma leachii PG50] Length = 205 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 76/215 (35%), Gaps = 29/215 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK+T + + L + + V + P + + + + A + Sbjct: 3 IAIFGTVGAGKSTISQEISKRLGYEIFKEPVEKNPYFEQYYKDLKKTVFKMQIYMLTARS 62 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + ++EN+I L+E I F+ +Y + +++ + + Sbjct: 63 KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQIDYNTYIEFYNNVVL 113 Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + P D I L + + R++ R E D E + + Sbjct: 114 ENLKIPENKLNFDIVIYLKVSTKTAISRIKKRGRAEELLIGD-------EYWETLNKNYE 166 Query: 179 DIARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211 + + +VD+ V T I I+ +L Sbjct: 167 EFYKQNIYNFPFFVVDAELD---VKTQIELIMNKL 198 >gi|326389550|ref|ZP_08211117.1| guanylate kinase [Thermoanaerobacter ethanolicus JW 200] gi|325994555|gb|EGD52980.1| guanylate kinase [Thermoanaerobacter ethanolicus JW 200] Length = 207 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G GAGK T L + + TR+P E + S Sbjct: 6 KKGLLIVLSGPSGAGKGTICKALMEKEKNLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E E ++ + A H ++ + L EG ++ L Sbjct: 65 EKMIENDSFLEWAKVYGHYYGTPKDFVLKNLEEGNDVV--------------------LE 104 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +D + ++E P+ I LP + R++ R + E + F+ Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ +++ S + I I+ Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIRAII 185 >gi|281491654|ref|YP_003353634.1| deoxynucleoside kinase [Lactococcus lactis subsp. lactis KF147] gi|281375372|gb|ADA64885.1| Deoxynucleoside kinase [Lactococcus lactis subsp. lactis KF147] Length = 212 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 71/233 (30%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ L L+ P + + Sbjct: 2 IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117 A + L+ I+ A ++ +L DR + + Y+ + L + Sbjct: 48 YAFLLQIYFLNKRFESIKMAYLQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106 Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L+E+ + + PD + +D+ + L R+ R FE+ + E + Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156 Query: 175 QIFLDIARNQPDRCH--------IVDS------AHS--FQSVATNILNIVWEL 211 + + PD +D + V I N + +L Sbjct: 157 DYYAQVHDEYPDWYKNYNISPKLRIDGDSIDFVNNPEHLDEVLGQIDNELKKL 209 >gi|302389586|ref|YP_003825407.1| guanylate kinase [Thermosediminibacter oceani DSM 16646] gi|302200214|gb|ADL07784.1| guanylate kinase [Thermosediminibacter oceani DSM 16646] Length = 204 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 28/175 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G+ I G GAGK T +LL + V TR P + Sbjct: 3 KKGMLIVLSGPSGAGKGTLCNLLLQRRPELALSVSVTTRPPRPGEVHGVNYFFTDRENFE 62 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + E + A ++ + L GK ++ + QG + ++ Sbjct: 63 QMIRKGE-FLEWARVYNNYYGTPRKFVEEQLEAGKDVILE------IDIQGAKQVKENC- 114 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 PD I LP + R++ R S E + + + + Sbjct: 115 -------------PDAVFIFILPPDIEELKNRIKKRGSETEESFNLRIKSAEEEL 156 >gi|254784778|ref|YP_003072206.1| deoxynucleoside kinase family protein [Teredinibacter turnerae T7901] gi|237683798|gb|ACR11062.1| deoxynucleoside kinase family protein [Teredinibacter turnerae T7901] Length = 228 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 67/211 (31%), Gaps = 46/211 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG G GKT+ L NY+ + R P E ++ A Sbjct: 18 RYIAVEGPIGVGKTSLARRLALTF---NYETLLER-AEDNPFLEKFY------ANEKNAA 67 Query: 65 EAEAIVFAAARLDHV-----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + F R+ + ++ P + +L DR +A Q D Sbjct: 68 LPTQLFFLFQRMQQLNALQQHDMFEPVRVADFLLEKDR----LFA-QVVLDEDALRIYHQ 122 Query: 120 LQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + +++ PD I L PV + +R+Q R V + +L Sbjct: 123 VYDHLTIDAPKPDLVIYLQAPVQVLTERIQRR---------------GVAFEQTISAAYL 167 Query: 179 DIARNQPDRC---------HIVDSAHSFQSV 200 + R IV++A V Sbjct: 168 EELNQAYTRFFHYYDAAPLLIVNAA-DIDWV 197 >gi|227893867|ref|ZP_04011672.1| deoxyadenosine kinase [Lactobacillus ultunensis DSM 16047] gi|227864356|gb|EEJ71777.1| deoxyadenosine kinase [Lactobacillus ultunensis DSM 16047] Length = 215 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + L+H I A+ E + DR + D+ + A D ++ D L Sbjct: 53 --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E +++ PD I + + +D L R++ R E D Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLARIKKRGRAFEQISSD 155 >gi|110669293|ref|YP_659104.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi DSM 16790] gi|109627040|emb|CAJ53516.1| signal recognition particle receptor SRalpha [Haloquadratum walsbyi DSM 16790] Length = 413 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 19/156 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAE 65 I F G+ G GKTT I+ L ++L+ + V + A E R + Sbjct: 216 IVFTGVNGVGKTTSIAKLVQYLESRGLSVVMANGDTYRAGANEQIRE-----HAKTLDTK 270 Query: 66 AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A + + + A ++L D R + + + L++I Sbjct: 271 LIAHEQGGDPAAVLYDAVEYAEANDIDVVLGD---------TAGRLHTSNDLMAQLEKID 321 Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158 + V PD T+ +D + ++R + E Sbjct: 322 -RVVNPDMTLFVDEAVAGQDAVERAKQFNEAAEIDG 356 >gi|170295834|ref|NP_955789.2| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial precursor [Rattus norvegicus] gi|81882328|sp|Q561S0|NDUAA_RAT RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|62531217|gb|AAH93375.1| Ndufa10 protein [Rattus norvegicus] gi|149037564|gb|EDL91995.1| rCG55630, isoform CRA_b [Rattus norvegicus] Length = 355 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 20/168 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58 I+ +G +GK + L K+Y + T + S Sbjct: 60 ITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYD 119 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108 D ++ ++ A+RL + + L G+ ++ +R + S + + QG Sbjct: 120 NPKSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGF 178 Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 179 IRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 226 >gi|9634821|ref|NP_039114.1| Deoxycytidine kinase [Fowlpox virus] gi|18203075|sp|Q9J579|DCK2_FOWPN RecName: Full=Probable deoxycytidine kinase FPV151; Short=dCK gi|7271649|gb|AAF44495.1|AF198100_142 ORF FPV151 Deoxycytidine kinase [Fowlpox virus] gi|41023436|emb|CAE52690.1| hypothetical protein [Fowlpox virus isolate HP-438/Munich] Length = 235 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 41/227 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS EG AGK+T I++L Y+V +EP LL + A Sbjct: 26 ISIEGNISAGKSTLINILSD----NGYNVV--QEPLEQWRGNN----LLDKLYKDPSRWA 75 Query: 67 EAIVFAAARLDHVENVIRPALMEGK-------ILLCDRFLDSSYAY-QGERDSSQHLFLD 118 A AL + K + D+++ ++ + G D ++ + Sbjct: 76 YTFQSHAF--WTRTKTYIDALNKNKGNIILERSVFSDKYIFATALHDIGYIDDTEWNIYN 133 Query: 119 SLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175 + + ++ D I L DI KR+ NR E+ +DY ++H+K + Sbjct: 134 EYSKWMTEFMDIKIDGIIYLKTSPDICYKRMLNRARHEENTVKIDYL----NLLHDKHEK 189 Query: 176 IFLDIARNQPDRCHI-----------VDSAHSFQSVATNILNIVWEL 211 ++ N + +D ++ S+ +NI + + EL Sbjct: 190 ---WLSENNEHEFKVPVLEINGDGDFIDDSNRQSSILSNIYDFISEL 233 >gi|294155669|ref|YP_003560053.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145] gi|291599936|gb|ADE19432.1| deoxyguanosine kinase [Mycoplasma crocodyli MP145] Length = 130 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 9/92 (9%) Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RRQIFLDIARNQP 185 PD + LD+ ++ +R+ R E D +++ + + F+ +A Sbjct: 43 PDFALFLDVNFEVVKQRIIKRNRSSEVDNFD----ENLDYFYRLWSMYKDEFISLANRYK 98 Query: 186 DRCHIVDSA-HSFQSVATNILNIVWELVQKRV 216 I+D+ ++ + V ++N + ++ K + Sbjct: 99 IPFVIIDANENNEEKVLEKVINEIEKIKDKYL 130 >gi|171685546|ref|XP_001907714.1| hypothetical protein [Podospora anserina S mat+] gi|170942734|emb|CAP68387.1| unnamed protein product [Podospora anserina S mat+] Length = 211 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 62/203 (30%), Gaps = 33/203 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA----EA 66 G GAGK T +L + R + S D+ A Sbjct: 16 GAPGAGKGTLCKMLAEA-----------NNVDHLSLGDLLRQTVSSPNADQLIAGCIHRG 64 Query: 67 EAIVFAAARLDHVENVIRP-ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E + V +P + G+ LL D F LD +E Sbjct: 65 ELLPTHILHELLYHRVAQPVSSTAGRPLLLDGF---------------PRRLDQAREFEA 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 P + D P D+ +RV R R ++ F+++ E I AR + Sbjct: 110 FGP-PKLILFFDCPEDLARERVITRKLGRFGDTVEIFDKRYSEFRESNPPILSHYARPE- 167 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 R +D++ + + + + Sbjct: 168 GRLITIDTSGATEESYQKLQAAL 190 >gi|291242167|ref|XP_002740977.1| PREDICTED: UMP-CMP kinase 1-like [Saccoglossus kowalevskii] Length = 197 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 78/218 (35%), Gaps = 57/218 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T S + + VH+ A + R + ++E Sbjct: 13 GAPGAGKGTQCSNIVEKFKY----VHL-------SAGDLLR-------AERNEPKSEF-- 52 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFL-DSSYAYQGERDSSQHLFL--DSL 120 ++I + EGKI+ L +R + DS A QG D+L Sbjct: 53 ---------GDLIATHIKEGKIVPVAITCSLLERAMNDSMKAGQGNNFVIDGFPRNQDNL 103 Query: 121 QEISVQEVMPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + Q M D T + D P +I + R +R + D ++ + +KR + Sbjct: 104 DGWNCQ--MGDKTNLKFVLFFDCPEEICIDRCISRGAAGSGRTDD--NKESL---KKRFE 156 Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 ++ + + + VD + S +V T++ + Sbjct: 157 TYVTSTKPIIDHYAEKNLVKKVDGSRSADAVFTDVQAL 194 >gi|117606366|ref|NP_065582.3| UMP-CMP kinase 2, mitochondrial precursor [Mus musculus] gi|187470852|sp|Q3U5Q7|CMPK2_MOUSE RecName: Full=UMP-CMP kinase 2, mitochondrial; AltName: Full=Thymidylate kinase LPS-inducible member; Short=TYKi; Flags: Precursor Length = 447 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 248 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 300 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 301 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 353 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 354 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 405 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 406 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 443 >gi|225708806|gb|ACO10249.1| Deoxynucleoside kinase [Caligus rogercresseyi] Length = 233 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 28/223 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEF 62 + EG +GKTT + L + L + V V EP ++L + + Sbjct: 6 VCVEGNIASGKTTFLKLFEAGLSGCKSGPSVRVVEEPVSAWQNLHGHNILELMYKDPSRW 65 Query: 63 GAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G ++ V H V+ I+ LME +L ++ ++ G +++ L Sbjct: 66 GHLFQSYVALTMTQVHTMRVKEEIK--LMERSLLTAEKCFAANLYNSGNMSEAEYRVLKE 123 Query: 120 ----LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRR 174 L +V+PD + L + LKRV +R ES LDY R+ +HE Sbjct: 124 WYAYLNAHHKMKVLPDLIVYLQTTPETCLKRVISRSRHEESTIPLDYL-RELHELHEAC- 181 Query: 175 QIFLDIARNQPDR--CHIVDSA-----HSFQSVATNILNIVWE 210 + ++ + +VD+ S ++ +LN + + Sbjct: 182 -----LIQDSSLKVPVLVVDAENNNFLLSPETSFKPVLNQIMD 219 >gi|53725772|ref|YP_103881.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC 23344] gi|254178917|ref|ZP_04885571.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC 10399] gi|254207928|ref|ZP_04914278.1| deoxynucleoside kinase family protein [Burkholderia mallei JHU] gi|254355930|ref|ZP_04972208.1| deoxynucleoside kinase family protein [Burkholderia mallei 2002721280] gi|52429195|gb|AAU49788.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC 23344] gi|147751822|gb|EDK58889.1| deoxynucleoside kinase family protein [Burkholderia mallei JHU] gi|148024905|gb|EDK83083.1| deoxynucleoside kinase family protein [Burkholderia mallei 2002721280] gi|160694831|gb|EDP84839.1| deoxynucleoside kinase family protein [Burkholderia mallei ATCC 10399] Length = 227 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 18 RYLAIEGPIGVGKTTFATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + I A ++ D F+ + +A D L+ Sbjct: 71 Q----LAFALQRERQAREIAAAHEANTPIVAD-FMPQKNEIFARLTLPDDEWQLYRSLAA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + PD + L ++ R+Q R E D + Sbjct: 126 HLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 166 >gi|192910870|gb|ACF06543.1| uridylate kinase [Elaeis guineensis] Length = 205 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 65/216 (30%), Gaps = 63/216 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + + A + R + S + Sbjct: 25 GGPGSGKGTQCANIVKHF---GF--------THLSAGDLLRAEIKSGSENG--------- 64 Query: 71 FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114 +I+ + EGKI+ D+FL + R+ Sbjct: 65 ----------TMIQNMIKEGKIVPSEVTIKLLQKAMLETGNDKFLIDGF----PRNEENR 110 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 + L +I P+ + D P + +R+ +R R+ ++ ++ + E Sbjct: 111 AAFEKLTKI-----EPEFVLFFDCPEEEMERRLLSRNQGRDDDNIETIRKRFKVFVESSL 165 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + + +D+A V + I Sbjct: 166 PVVEYY-----AAKGKVRKIDAAKPIDEVFEAVKAI 196 >gi|116512013|ref|YP_809229.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris SK11] gi|116107667|gb|ABJ72807.1| Deoxynucleoside kinase [Lactococcus lactis subsp. cremoris SK11] Length = 212 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 51/233 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ L L+ P + + Sbjct: 2 IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117 A + L+ I+ A + +L DR + + Y+ + L + Sbjct: 48 YAFLLQIYFLNKRFESIKMAYRQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106 Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L+E+ + + PD + +D+ + L R+ R FE+ + E + Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156 Query: 175 QIFLDIARNQPDRCH--------IVDSAHSFQSV-----ATNILNIVWELVQK 214 + + PD +D S V +L + + ++K Sbjct: 157 DYYAQVHDEYPDWYKNYDISPKLRIDGD-SIDFVNNPEHLDEVLGQIDDELKK 208 >gi|34785825|gb|AAH57565.1| Cmpk2 protein [Mus musculus] Length = 417 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 218 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 270 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 271 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 323 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 324 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 375 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 376 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 413 >gi|88801521|ref|ZP_01117049.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Polaribacter irgensii 23-P] gi|88782179|gb|EAR13356.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Polaribacter irgensii 23-P] Length = 381 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 59/191 (30%), Gaps = 22/191 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ ++ K P E F E Sbjct: 179 YIAIEGNIGAGKTSLSKMMSDAFNAKLVLERFADNPFLPKFYE-------DKERYAFPLE 231 Query: 66 AEAIVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE 122 F A R +++ + L + I + D ++ S + + L Sbjct: 232 MS---FLADRYHQLSDDLAQFDLFKNFI-ISDYYIFKSLIFAQVTLPADEYLLYRKMFNL 287 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I + PD + L D L+ ++ R E EK + + Sbjct: 288 IYKEIPKPDLYVYLYQNTDRLLENIKKRGRTYEQNI-------TPEYLEKIHEGYKGFIN 340 Query: 183 NQPD-RCHIVD 192 +Q D I+D Sbjct: 341 SQDDLNLLIID 351 >gi|148708065|gb|EDL40012.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform CRA_b [Mus musculus] Length = 367 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55 I+ +G +GK + + L T G P + + Sbjct: 60 ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 119 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109 ++ + A+RL + + L G+ ++ +R + S + + QG Sbjct: 120 DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 179 Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 180 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 226 >gi|148708069|gb|EDL40016.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform CRA_f [Mus musculus] Length = 345 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55 I+ +G +GK + + L T G P + + Sbjct: 50 ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 109 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109 ++ + A+RL + + L G+ ++ +R + S + + QG Sbjct: 110 DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 169 Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 170 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 216 >gi|26337977|dbj|BAC32674.1| unnamed protein product [Mus musculus] Length = 330 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55 I+ +G +GK + + L T G P + + Sbjct: 35 ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 94 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109 ++ + A+RL + + L G+ ++ +R + S + + QG Sbjct: 95 DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 154 Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 155 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 201 >gi|57641421|ref|YP_183899.1| signal recognition particle protein Srp54 [Thermococcus kodakarensis KOD1] gi|73919452|sp|Q5JJC8|SRP54_PYRKO RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|57159745|dbj|BAD85675.1| signal recognition particle, SRP54 subunit [Thermococcus kodakarensis KOD1] Length = 448 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 15/126 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAI 69 GI+G+GKTT ++ L R+LQ++ Y V V P A LL G++ FG E Sbjct: 107 GIQGSGKTTSVAKLARYLQKRGYKVGVVCSDTWRPGAYYQLRQLLDPFGIEVFGDPEE-- 164 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 + + +G ++ +DS R + ++ +++I + + Sbjct: 165 ---KDAVKLAREGVEHFREKGVDVII---VDS-----AGRHKEEKGLIEEMRQI-SEAIK 212 Query: 130 PDCTII 135 P I+ Sbjct: 213 PHEVIL 218 >gi|239626492|ref|ZP_04669523.1| YqaC [Clostridiales bacterium 1_7_47_FAA] gi|239516638|gb|EEQ56504.1| YqaC [Clostridiales bacterium 1_7_47FAA] Length = 174 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 70/221 (31%), Gaps = 60/221 (27%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G+ + G+ G GK+T +L L D P L S Sbjct: 1 MGTGIIVC--GLNGTGKSTLGKVLVERLNFHFIDSESLYFLTADP--------LYSYAYP 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 EA ++F N I+ + ++ + + +L Sbjct: 51 RTHEEAAKLLF---------NEIK--------------MYENFVFASVK-GDYGEWLYPC 86 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----DYFERKDVMIHEKRRQI 176 + + +++D+P D+ ++RV+NR + + D +E++ H + + Sbjct: 87 FQYA---------VLIDVPRDVRIQRVKNRSFQKFGNRMLPGGDLYEQEKNFFH-RVQ-- 134 Query: 177 FLDIARNQPDRC--------HIVDSAHSFQSVATNILNIVW 209 A N + VD S I+ + Sbjct: 135 --SRAENDVEEWLQSLSCPVIRVDGTKSIGENTNLIMEQIR 173 >gi|294790602|ref|ZP_06755760.1| deoxyadenosine kinase [Scardovia inopinata F0304] gi|294458499|gb|EFG26852.1| deoxyadenosine kinase [Scardovia inopinata F0304] Length = 242 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 24/162 (14%) Query: 15 AGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VF 71 AGK+T +L L + + P ++ + A + VF Sbjct: 14 AGKSTLTQILSDEL---GTKAYFEPVEDNPVLPLFYKGNQLVEEGKAET-NPYAFLLQVF 69 Query: 72 AAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHLFLDSL 120 R + I+ A+ E +L DR + DS + A Q E + L + L Sbjct: 70 FLNRRFAM---IKQAMQEDNNIL-DRSIYEDSIFMKMNTDQGHATQEEWKIYKALLDNML 125 Query: 121 QEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 +E+ + ++ PD I LD+ ++ L R++ R E D Sbjct: 126 EELPYAAKKKSPDLMIFLDVNLETMLSRIKIRGREYEQVESD 167 >gi|149037563|gb|EDL91994.1| rCG55630, isoform CRA_a [Rattus norvegicus] Length = 335 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 60/168 (35%), Gaps = 20/168 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58 I+ +G +GK + L K+Y + T + S Sbjct: 60 ITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYD 119 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108 D ++ ++ A+RL + + L G+ ++ +R + S + + QG Sbjct: 120 NPKSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGF 178 Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 179 IRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 226 >gi|187918111|ref|YP_001883674.1| deoxyguanosine kinase [Borrelia hermsii DAH] gi|119860959|gb|AAX16754.1| deoxyguanosine kinase [Borrelia hermsii DAH] Length = 205 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 59/171 (34%), Gaps = 21/171 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + L I EG+ GAGKTT +L + ++ E Sbjct: 1 MEAILVIVIEGLIGAGKTTLGHVLSKEF-----NIPFYSELNNEFTLFMLDKFYKDKSRW 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ------- 113 F + I F R ++ + + +G + DR + + + S Sbjct: 56 AFSVQ---INFLNERFKLIKAIFK---TKGG--ILDRSIYGDRVFASLLNESGYISNAEC 107 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFE 163 ++ D L + P I LD VD +R++NR E+ +Y E Sbjct: 108 RIYFDLLDNMLEHSQRPVLMIYLDCSVDEAERRIKNRNRSFETGIPREYLE 158 >gi|148705023|gb|EDL36970.1| thymidylate kinase family LPS-inducible member, isoform CRA_a [Mus musculus] Length = 394 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 52/228 (22%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F I+ EG++ GKTT + L+ V + P P R + Sbjct: 195 QKGKFQVIAIEGLDATGKTTLTQSVSESLKA----VLLQSPP---PCISQWRKIFDDEPT 247 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLD 118 A + A E+ P ++ DR+ S+ Y + S L +L Sbjct: 248 IIRRAFYSLGNYLVASEIAKESTNFP-------VIVDRYWHSTATYAIATEVSGGLQYLP 300 Query: 119 SLQEISVQEVMP-DC---------TIILDLPVDIGLKRVQNRYS-------LRESACLDY 161 Q P D T + + ++R+Q R E+ + Sbjct: 301 PAHHPVYQ--WPGDLLKPDLVLLLT----VNSEERVRRLQGRGQEKTKEEAELEANNV-- 352 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +K + + P CH+VD++ S ++V +L ++ Sbjct: 353 -------FRQKVEMTYQRM--ENPS-CHLVDASPSRETVLQKVLELIQ 390 >gi|261416815|ref|YP_003250498.1| deoxynucleoside kinase [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373271|gb|ACX76016.1| deoxynucleoside kinase [Fibrobacter succinogenes subsp. succinogenes S85] Length = 216 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 54/155 (34%), Gaps = 14/155 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EG+ G GKT+ + + + P E + + Sbjct: 9 FMAIEGVIGVGKTSLCRAISERWNAMFIEENFAENPFLPKFYE---------NRAAYAFQ 59 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + + F R ++N + + +L+ D + D +A Q ++ ++ Sbjct: 60 TQ-LFFLLDRFKQLQNSALQSDLFHDLLVSD-YTFDKDRIFASQNLTENEMTMYDQVSNA 117 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + PD + L V L+R++ R E + Sbjct: 118 LVHDIRKPDYVVYLQASVSTLLQRIRGRGRAMEKS 152 >gi|125624153|ref|YP_001032636.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris MG1363] gi|24935317|gb|AAN64310.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris MG1363] gi|124492961|emb|CAL97924.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris MG1363] gi|300070929|gb|ADJ60329.1| deoxynucleoside kinase [Lactococcus lactis subsp. cremoris NZ9000] Length = 212 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 51/233 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ L L+ P + + Sbjct: 2 IVLAGTIGAGKSSLAKALGEHLKTD----VFYEAVDNNPVLDLYYQ----------DPQK 47 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL---- 117 A + L+ I+ A + +L DR + + Y+ + L + Sbjct: 48 YAFLLQIYFLNKRFESIKMAYRQDNNVL-DRSIFEDELFLTLNYKNGNVTKTELEIYQDL 106 Query: 118 --DSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L+E+ + + PD + +D+ + L R+ R FE+ + E + Sbjct: 107 LANMLEELDGMPKKRPDLLVYIDVSFETMLSRIAQRGRS--------FEQ--IENQEGLK 156 Query: 175 QIFLDIARNQPDRCH--------IVDSAHSFQSV-----ATNILNIVWELVQK 214 + + PD +D S V +L + + ++K Sbjct: 157 DYYAQVHNEYPDWYKNYDISPKLRIDGD-SIDFVNNPEHLDEVLGQIDDELKK 208 >gi|329914131|ref|ZP_08276064.1| Deoxyadenosine kinase [Oxalobacteraceae bacterium IMCC9480] gi|327545197|gb|EGF30468.1| Deoxyadenosine kinase [Oxalobacteraceae bacterium IMCC9480] Length = 213 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 15/155 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G GK++ L + + P P E + + Sbjct: 8 YIVVEGPIGVGKSSLAQKLGENFGAQ----LLLERPEENPFLERFYR-----DAERYALP 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + F R++ + ++ + ++ L D D +A D +L+ Sbjct: 59 TQ-MFFLFQRMNQLRDLAQTDFFNASLVSDFLID--KDPLFARLTLGDDELNLYQQMYDN 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + Q +PD I L ++RV+ R E+ Sbjct: 116 LHPQAPVPDLVIYLQAEPATLIERVRKRGVTVEAG 150 >gi|114556433|ref|XP_001163790.1| PREDICTED: cytidylate kinase isoform 1 [Pan troglodytes] Length = 228 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 64/211 (30%), Gaps = 55/211 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + EGKI+ L R +D + A +R+ D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQRNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I ++R R + + + + EKR Q Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQT 186 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVA 201 +L + + + +D++ S V+ Sbjct: 187 YLQSTKPIIDLYEEMGKVKKIDASKSVDEVS 217 >gi|13195624|ref|NP_077159.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial precursor [Mus musculus] gi|32363386|sp|Q99LC3|NDUAA_MOUSE RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|13097393|gb|AAH03439.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 [Mus musculus] gi|74219344|dbj|BAE26801.1| unnamed protein product [Mus musculus] gi|148708068|gb|EDL40015.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform CRA_e [Mus musculus] Length = 355 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 57/167 (34%), Gaps = 18/167 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA------AEAARHVLL 55 I+ +G +GK + + L T G P + + Sbjct: 60 ITVDGNICSGKNKLAKEIAQQLGMKHYPEAGIQYSSTTTGDGRPLDIEFSGSCSLEKFYD 119 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109 ++ + A+RL + + L G+ ++ +R + S + + QG Sbjct: 120 DPKSNDGNSYRLQSWLYASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYI 179 Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 180 RKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 226 >gi|296196368|ref|XP_002745789.1| PREDICTED: deoxycytidine kinase-like [Callithrix jacchus] Length = 260 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 86/240 (35%), Gaps = 40/240 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREP------GGTPAAEAAR 51 IS EG AGK+T +++LK+ + + +VH T++ + Sbjct: 24 ISIEGNIAAGKSTFVNILKKVCEDWEVVPEPVARWCNVHSTQDEFEELTTSQKNGGNVLQ 83 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAY 105 + F + A + + R +++ +P L + + DR++ +S Y Sbjct: 84 MMYEKPERWSFTFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLY 142 Query: 106 QGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CL 159 + E + + D Q + D I L + L R+ R E L Sbjct: 143 ESECMNETEWTIYQDWHDWTNNQFGQSLELDGIIYLRATPEKCLHRMYLRGRNEEQGIPL 202 Query: 160 DYFER-----KDVMIHE--KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +Y E+ + ++H K +L + P +D F+ +++ V E + Sbjct: 203 EYLEKLHHKHESWLLHRTLKTNFNYL---QEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|256965119|ref|ZP_05569290.1| shikimate kinase [Enterococcus faecalis HIP11704] gi|307273219|ref|ZP_07554465.1| shikimate kinase [Enterococcus faecalis TX0855] gi|256955615|gb|EEU72247.1| shikimate kinase [Enterococcus faecalis HIP11704] gi|306510204|gb|EFM79228.1| shikimate kinase [Enterococcus faecalis TX0855] Length = 168 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 57/198 (28%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR+ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIAEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIIHEILQQLKE 168 >gi|254173493|ref|ZP_04880165.1| shikimate kinase [Thermococcus sp. AM4] gi|214032185|gb|EEB73015.1| shikimate kinase [Thermococcus sp. AM4] Length = 177 Score = 50.4 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 71/214 (33%), Gaps = 55/214 (25%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G GKTT LL + L Y+ R+ A + DE Sbjct: 1 MIIAVTGTPGVGKTTVSKLLAQKL---GYEYVSLRDY-------AMEKGIGEMKGDELEV 50 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + + + R +GK ++ D L Sbjct: 51 EVDELAYNFERD-----------FKGKNVVVDGHL------------------------- 74 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + D ++L + +R+ R RE + E + V + L A + Sbjct: 75 SHFLNADLVVVLRAHPRLIGERLTERGYSREKVGEN-VEAELVDVI-------LVEALEE 126 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + VD+ + + V IL ++ + V++RVS Sbjct: 127 NENVVEVDTTGKTPEEVVNEILELIEKGVRRRVS 160 >gi|148508292|gb|ABQ76076.1| signal recognition particle receptor SRalpha [uncultured haloarchaeon] Length = 413 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 19/156 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAE 65 I F G+ G GKTT I+ L ++L+ + V + A E R + Sbjct: 216 IVFTGVNGVGKTTSIAKLVQYLESRGLSVVMANGDTYRAGANEQIRE-----HAKTLDTK 270 Query: 66 AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A + + + A ++L D R + + + L++I Sbjct: 271 LIAHEQGGDPAAVLYDAVEYAEANDIDVVLGD---------TAGRLHTSNDLMAQLEKID 321 Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158 + V PD T+ +D + ++R + E Sbjct: 322 -RVVNPDMTLFVDEAVAGQDAVERAKQFNEAAEIDG 356 >gi|195376367|ref|XP_002046968.1| GJ12193 [Drosophila virilis] gi|194154126|gb|EDW69310.1| GJ12193 [Drosophila virilis] Length = 225 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 74/215 (34%), Gaps = 42/215 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCGVDEFGA 64 G G GK T + + + + + RE G+ + ++ S G Sbjct: 36 GGPGCGKGTQCAKIVE---KYGFTHLSSGDLLREEVASGSDKGRQLQEIMTSGG---LVP 89 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AE + A + + + L++G R+ +Q + + Sbjct: 90 NAEVLSLLNAAVTRTKGSSKGFLIDGY----------------PREKNQGIEFEQ----- 128 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEKRRQIFLDI 180 ++ P D + D D LKR+ R + E D E R + ++ L++ Sbjct: 129 --KIAPADLALYFDCSEDTMLKRILARANAAEVKRADDNEETIRSRLQTFKRNTSAILEL 186 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +++ + ++ ++ ++QK+ Sbjct: 187 ---YAEKTLTINAERDVDDIFMEVVEVIDCVLQKK 218 >gi|167537263|ref|XP_001750301.1| hypothetical protein [Monosiga brevicollis MX1] gi|163771291|gb|EDQ84960.1| predicted protein [Monosiga brevicollis MX1] Length = 581 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 48/210 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G+GK+T + L + R ++ R +L + + Sbjct: 410 VVIAGNSGSGKSTVAAELAGSI-GSGIGAIHVR-------SDIVRKRMLGVSSE--TRLS 459 Query: 67 EAIVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A +AR ++ A + G ++ D +D+ Q F++ L+ Sbjct: 460 DAHYVESARRQCYAALVELANNLIAVGCGVVLD---------ATFQDTWQREFINDLRGA 510 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFERKDVMIHEKRRQIFLDI- 180 P I LD+P L+R++ R S R+++ ++ FE+ L + Sbjct: 511 ------PVKCIWLDVPRATLLERIRLRDSGRDASDMNASKFEK-------------LTLP 551 Query: 181 --ARNQPDRCHIVDSAHSFQSVATNILNIV 208 + P +D + +VA +LN V Sbjct: 552 PPPTSAP--WVHIDGVGAVANVAERVLNAV 579 >gi|193216709|ref|YP_001999951.1| deoxyguanosine kinase [Mycoplasma arthritidis 158L3-1] gi|193002032|gb|ACF07247.1| deoxyguanosine kinase [Mycoplasma arthritidis 158L3-1] Length = 218 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 63/219 (28%), Gaps = 31/219 (14%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 GI G AGK+ L + + E + + G ++ Sbjct: 4 GISGMIAAGKSQLSDKLYKHYEDSVM--LHEFEENDEVFNTFLKWLYEKQPNLTIGFQSY 61 Query: 68 AIVFAAARLDHVENVIRPALMEGK-----ILLCDRFLDSSYAYQGERDSSQHLFLDSL-- 120 V + E K + DRF S Y + L Sbjct: 62 I---VENHSAKFAEVFKKYQSENKDPQKSHIFLDRF--SVEHYIFAKLILNEKEPKYLKA 116 Query: 121 -----QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + +E +PD I LD+ + R+ R E A D + + Sbjct: 117 YDALFETLITKEELPDFAIFLDISFETFKNRILKRGRESEIANFD----DNFAYFKNLHD 172 Query: 176 IFL----DIARNQPDRCHIVDSA-HSFQSVATNILNIVW 209 +L +IA + I+D+ + V + I+ Sbjct: 173 NYLKIFKEIAEKFKLKYFIIDTNDKTETEVFHEAVKIIE 211 >gi|229091546|ref|ZP_04222755.1| uridine kinase [Bacillus cereus Rock3-42] gi|228691840|gb|EEL45588.1| uridine kinase [Bacillus cereus Rock3-42] Length = 187 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 72/222 (32%), Gaps = 55/222 (24%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56 MN I+ + G GKTT L L + +D + E T + Sbjct: 2 MNKKTKIITIAAVSGGGKTTVTERLTEKLTNSKALYFDSYH-FENCPTDICKWI------ 54 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + + H+ IR + ++ I+ D +AY Sbjct: 55 --DEGANYNEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 92 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R R DY E IH Sbjct: 93 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DYKEDTMSEIHNDLKHY 138 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D + S + I ++ Sbjct: 139 ITYARKAYLEALHTVKPNSDIVLDGSLSVDEIINQIEEELYR 180 >gi|256619069|ref|ZP_05475915.1| shikimate kinase [Enterococcus faecalis ATCC 4200] gi|256598596|gb|EEU17772.1| shikimate kinase [Enterococcus faecalis ATCC 4200] Length = 168 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGCSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR++ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIKEDTENQRPLAIERSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIIHEILQQLKE 168 >gi|195445704|ref|XP_002070447.1| GK12063 [Drosophila willistoni] gi|194166532|gb|EDW81433.1| GK12063 [Drosophila willistoni] Length = 253 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 88/248 (35%), Gaps = 56/248 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64 EG G+GKTT ++ + +V + EP ++L Sbjct: 26 IEGNIGSGKTTFLN----HFDKYRDEVCLLTEPVEKWRNVNGVNLLELMYKEPKKWAMPF 81 Query: 65 EAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHLFL-DS 119 ++ + A + ++ + +R + S+ + R+ S + ++ Sbjct: 82 QSYVTLTMLQAHTQITDKKLK---------IMERSIYSARYCFVENMFRNGSLEQGMYNT 132 Query: 120 LQEISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER------KDVM 168 LQE V D I L ++ +R++ R ES + + +D + Sbjct: 133 LQEWYKFIEQSIHVQADLIIYLRTSPEVVYERMRQRARSEESCIPLKYLQELHESHEDWL 192 Query: 169 IHEKRRQIFLDIARNQPDRCH--IVDSAHSFQSVATN-------ILNIVWELVQKRVSPL 219 IH++R P C ++D+ + +++ + I + + Q + SP+ Sbjct: 193 IHQRR-----------PQTCKVLVLDADLNLENILSEYQRSETSIFDAISGAHQHQPSPV 241 Query: 220 ---SSKKD 224 SK++ Sbjct: 242 LVSPSKRE 249 >gi|256961921|ref|ZP_05566092.1| shikimate kinase [Enterococcus faecalis Merz96] gi|293382989|ref|ZP_06628907.1| shikimate kinase [Enterococcus faecalis R712] gi|293389522|ref|ZP_06633979.1| shikimate kinase [Enterococcus faecalis S613] gi|312907540|ref|ZP_07766531.1| shikimate kinase [Enterococcus faecalis DAPTO 512] gi|312910158|ref|ZP_07769005.1| shikimate kinase [Enterococcus faecalis DAPTO 516] gi|256952417|gb|EEU69049.1| shikimate kinase [Enterococcus faecalis Merz96] gi|291079654|gb|EFE17018.1| shikimate kinase [Enterococcus faecalis R712] gi|291081139|gb|EFE18102.1| shikimate kinase [Enterococcus faecalis S613] gi|310626568|gb|EFQ09851.1| shikimate kinase [Enterococcus faecalis DAPTO 512] gi|311289431|gb|EFQ67987.1| shikimate kinase [Enterococcus faecalis DAPTO 516] Length = 168 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR++ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIKEDTENQRPLAIERSPKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIIHEILQQLKE 168 >gi|260790957|ref|XP_002590507.1| hypothetical protein BRAFLDRAFT_124506 [Branchiostoma floridae] gi|229275701|gb|EEN46518.1| hypothetical protein BRAFLDRAFT_124506 [Branchiostoma floridae] Length = 249 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 24/181 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ EG G+GKTT L F + K +V +EP + L + + Sbjct: 42 VAIEGNIGSGKTT---FLDHFAKTKGIEVI--QEPVDMWRNVRGHNTL---ALMYSDPKR 93 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY------AYQGERDSSQHLFL--D 118 + F + + I + I + +R + S+ ++ + + + Sbjct: 94 WSFAFQSY-VQLTMLDIHTRQQKALIRMMERSIYSAKYCFVENMHESGNMTDAEYVVLTE 152 Query: 119 SLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-----KDVMIHE 171 I + Q+V D + L ++ +R++ R E A +DY + +D + H+ Sbjct: 153 WFNWILANQKVQIDLIVYLKTSPEVCHQRIKQRCREEEKAIPMDYLQALHNAHEDWLTHK 212 Query: 172 K 172 K Sbjct: 213 K 213 >gi|313678154|ref|YP_004055894.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45] gi|312950426|gb|ADR25021.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45] Length = 220 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 70/223 (31%), Gaps = 32/223 (14%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD- 60 + I GI G +GK+T S L + + + + + L + Sbjct: 1 MLI---GISGMISSGKSTLTSKLHKHFKT---SLMLKEYAEDSEVFNTFLKWLYEKQPNL 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGK-----ILLCDRFLDSSYAYQGER-DSSQH 114 G ++ + +I + K + DRF Y + Sbjct: 55 TIGFQSYV---VENHTTKLGELISEFNQQNKDWHTDHIFLDRFSIEHYIFANVNLRPKGQ 111 Query: 115 LFLDSLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +LD + + PD I LD+ + LKR+ R E +D F + Sbjct: 112 NYLDGYDALFTHLITKDETPDIAIYLDMSWETFLKRIFERGRQVE---IDNF-YANEEYF 167 Query: 171 EKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208 + ++ D+ A I+++ + V L I+ Sbjct: 168 KTLYNLYKDLFIKQAEKFNLEYKIIETDNLNEDEVFEKALEII 210 >gi|222147901|ref|YP_002548858.1| hypothetical protein Avi_1197 [Agrobacterium vitis S4] gi|221734889|gb|ACM35852.1| Conserved hypothetical protein [Agrobacterium vitis S4] Length = 177 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 68/208 (32%), Gaps = 43/208 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEF 62 I EG+ G GKT+ + LQR+ Y V RE G E L+ G+ Sbjct: 6 ILIEGVSGTGKTS----VATELQRRGYHVIHGDRELAYQGDPATGEPLDASALAQGILHV 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 H+ N+ + K L+ D S+ G R+ + + L Sbjct: 62 T---------FGHRHHLWNIDKV-----KALITDHSHPISFFCGGSRNFHRFIELF---- 103 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 D +LD+ R+ +R ++ + + DI Sbjct: 104 --------DGVFVLDVDQHTLKNRLVSRPEDEFGGKP-----EERDLIMRLHATKEDI-- 148 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWE 210 P ++D+ ++V IL + E Sbjct: 149 --PGNAMVIDATVPVEAVVEAILLGIEE 174 >gi|50365364|ref|YP_053789.1| deoxynucleoside kinase [Mesoplasma florum L1] gi|50363920|gb|AAT75905.1| deoxynucleoside kinase [Mesoplasma florum L1] Length = 206 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 74/220 (33%), Gaps = 31/220 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK++ L L + + + P + + + A + Sbjct: 3 IAIFGTVGAGKSSISQELSERLNYEIFPEPIDENPYFEDYYKDIKAYAFRMQIFMLTARS 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + A ++N I + ++ D F++ + D+ + D Q + Sbjct: 63 KQLFAAKD----LKNKIF-----DRTIIEDPIFMNVGHKMGNVNDTDYKTYCDFFQYVVS 113 Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + P D + L + + ++R+ R E + D + + + Sbjct: 114 ENLRYPNDRLKFDLVVYLKVSDETSIRRINERGRAAELSI-------DKNYWKILNESYE 166 Query: 179 DIARNQPD--RCHIVDSAHS-----FQSVATNILNIVWEL 211 + + + ++D+ + + V NI I E Sbjct: 167 EYYQEHKNDFPFLVIDANNDNLNEKVEEVIRNIEKIKKEF 206 >gi|212223710|ref|YP_002306946.1| putative kinase [Thermococcus onnurineus NA1] gi|229487551|sp|B6YUL3|KAD6_THEON RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|212008667|gb|ACJ16049.1| Hypothetical nucleotide kinase [Thermococcus onnurineus NA1] Length = 180 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 68/214 (31%), Gaps = 55/214 (25%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + IS G GAGKTT LL L Y+ +E + + Sbjct: 1 MIISVSGTPGAGKTTVSKLLSERL---GYEYVSVKELALSRGIG-----------ERVSD 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E V AR+ V G+ ++ D L Sbjct: 47 EIEIDVDELARV--VREEF-----SGRNVVLDGH---------------------LSHFV 78 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 D IIL + +R++ R ++ + E + V + L A + Sbjct: 79 PA----DVVIILRAHPRLIAERLKARGYSKKKLAEN-VEAELVDVI-------LVEALEE 126 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 +R VD+ S + V IL ++ +KRV Sbjct: 127 NERVLEVDTTGKSPEEVVEEILTLLKSGTKKRVG 160 >gi|291166103|gb|EFE28149.1| guanylate kinase [Filifactor alocis ATCC 35896] Length = 212 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 52/174 (29%), Gaps = 36/174 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G G+GK T ++ + TR P + + Sbjct: 3 KKGLLIVLSGPSGSGKGTICKRFLEKNEKVGLSISATTRAPRDGEVDGTHYFFIDKPKFE 62 Query: 61 EFGAEAEAIVFAAARLDHV--------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 E + E + + HV + + + G ++ Sbjct: 63 EMIEKQELLEYV-----HVFDNYYGTPKKYVEDKIESGDDVI------------------ 99 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER 164 L ++ ++++ PD +I LP + +R+ +R + +R Sbjct: 100 --LEIEIEGAMNIKASYPDAVLIFVLPPTIEELKRRICSRGTETMEQIDKRLDR 151 >gi|222081966|ref|YP_002541331.1| hypothetical protein Arad_8469 [Agrobacterium radiobacter K84] gi|221726645|gb|ACM29734.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 176 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 53/212 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EGI G GKT+ + LQ++ Y V R + + Sbjct: 8 IEGISGTGKTS----VATELQQRGYHVIH-----------GDREL-----AYQGDPRTGV 47 Query: 69 IVFAAARLDHVENVI----RPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++A+ ++ +V K+ L+ DR + ++ + H F+D Sbjct: 48 PLDSSAQRQNIPDVAFGHEHHIWDVDKVKSLVADRSH--AISFFCGGSRNFHHFIDLF-- 103 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-A 181 D +LD+ +D +R+ +R D F K R + L + A Sbjct: 104 --------DGVFVLDVDLDTLKRRLASRPE-------DEFGGKPAE-----RDVVLRLHA 143 Query: 182 RNQ--PDRCHIVDSAHSFQSVATNILNIVWEL 211 + P+ +D+A SV +IL+ E+ Sbjct: 144 TQEDIPNNATTIDAAAPLASVVDDILSKCGEI 175 >gi|148377285|ref|YP_001256161.1| deoxyguanosine kinase [Mycoplasma agalactiae PG2] gi|148291331|emb|CAL58714.1| Deoxyguanosine kinase [Mycoplasma agalactiae PG2] Length = 220 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 69/225 (30%), Gaps = 36/225 (16%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQ--------RKNYDVHVTREPGGTPAAEAARHV 53 + I GI G +GK+T + L + ++ +V T E ++ Sbjct: 1 MLI---GISGMISSGKSTLTAKLHKHFNTSLMLKEYDEDSEVFNTF---LKWLYEKQPNL 54 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSS 112 + + + + + + DRF Y + Sbjct: 55 TIGFQSYVVENHTTKLSELIDEFNKLNKNWQT-----DHIFLDRFSIEHYIFANVNLRPK 109 Query: 113 QHLFLDSLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +LD + + PD I LD+ + LKR+ R E +D F + Sbjct: 110 GQNYLDGYDALFTHLITKDETPDIAIYLDMSWETFLKRIFERGRQVE---IDNF-YANEE 165 Query: 169 IHEKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208 + ++ D+ A I+++ + V L I+ Sbjct: 166 YFKTLYNLYKDLFIKQAEKFKLEYKIIETDNLTEDEVFEKALEII 210 >gi|225712984|gb|ACO12338.1| UMP-CMP kinase [Lepeophtheirus salmonis] Length = 194 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 65/211 (30%), Gaps = 40/211 (18%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + L + +PG + E H +++ + Sbjct: 11 GGPGAGKGTQCEKIVEKYGFVHLSAGDLQRAERAKPG-SEYGELIEHHIVNGTIVP---- 65 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA +N I + K L+ D F + + S+ I Sbjct: 66 ------AAITCALPKNAIVNSTTSKKFLI-DGF--------PRNQGNVEEWKKSVGPIVN 110 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD------ 179 + + D D ++R +R + D E +KR +L+ Sbjct: 111 FRFL----LFFDCDEDTCVQRCLSRGAAGSGRSDDNIES-----LKKRCATYLNSTLGVI 161 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + R +D+ S V ++ I E Sbjct: 162 QSYEKEQRVKRIDATRSVDEVFEDVQKIFSE 192 >gi|209520584|ref|ZP_03269339.1| deoxynucleoside kinase [Burkholderia sp. H160] gi|209498977|gb|EDZ99077.1| deoxynucleoside kinase [Burkholderia sp. H160] Length = 226 Score = 50.0 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 53/161 (32%), Gaps = 17/161 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGA 64 +I+ EG G GKT+ L + + P P E R + + Sbjct: 19 YIAIEGPIGVGKTSLARRLAQRWSMH----ELFERPQDNPFLERFYRDTVRYALPVQLH- 73 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 FA R + V A G L+ D F+ + +A +D L+ Sbjct: 74 ------FALRRAQQAQEV-SAAQAGGTPLIAD-FITQRNDIFARLTLQDDEWQLYRALAA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 126 RLDVSASEPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166 >gi|108757889|ref|YP_630283.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622] gi|108461769|gb|ABF86954.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622] Length = 214 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 15/155 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G GKT+ ++L L + V P + +F Sbjct: 4 RYIVVEGPIGVGKTSLSNILAERLAGRRILEVVEENPFLSSFY---------TDRQKFAF 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + + + + + L + D +L D +A+ L+ + Sbjct: 55 QTQIFFLLSRFRQQ-QELFQQDLFSSMTV-SD-YLFAKDRIFAHLNLDAHELALYERVFE 111 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 + + PD I L +D+ L R++ R E Sbjct: 112 ALGPRVAKPDLVIYLQARLDVLLHRIKKRGREFER 146 >gi|297625037|ref|YP_003706471.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093] gi|297166217|gb|ADI15928.1| deoxynucleoside kinase [Truepera radiovictrix DSM 17093] Length = 210 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 34/231 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F++ G GAGK++ LL V P R Sbjct: 1 MFVAVAGNIGAGKSSLTRLLAEHYALAPIYEAVDENPYLEDFYRDMRRYAFHSQ------ 54 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ-----GERDSSQHLFL 117 + F A RL+ + P G ++ DR + D++ Q G + Sbjct: 55 ----MFFLAKRLEQHARHVNP----GDRVIQDRTIYEDAAVFAQNLFEEGVLGARDFGVY 106 Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ E + Q + PD I L + + + R E D + + ++E+ Sbjct: 107 RAMYEAATQVLRPPDLLIYLRAELPTLRRHIALRGRRFELGIEDAYLERLSALYERWFAS 166 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATN-----ILNIVWELVQKRVSPLSSK 222 + P V + V +L + + + V PL+++ Sbjct: 167 Y----TLSPKVVLEVGA---LDFVHRERDLQAVLARLAPWLAEPVLPLTAR 210 >gi|83319375|ref|YP_424567.1| nucleoside kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283261|gb|ABC01193.1| nucleoside kinase [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 205 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 33/217 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK+T + + L + + V P + + + + A + Sbjct: 3 IAIFGTVGAGKSTISQEISKRLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 62 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + ++EN+I L+E I F+ +Y + +++ + + Sbjct: 63 KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQIDYNTYIEFYNNVVL 113 Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + P D I L + + R++ R E D E + + Sbjct: 114 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEEPLIGD-------EYWETLNKNYE 166 Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + P +VD+ V I I+ +L Sbjct: 167 EFYKQNVYNFP--FFVVDAELD---VKAQIELIMNKL 198 >gi|254491972|ref|ZP_05105150.1| Deoxynucleoside kinase subfamily, putative [Methylophaga thiooxidans DMS010] gi|224462787|gb|EEF79058.1| Deoxynucleoside kinase subfamily, putative [Methylophaga thiooxydans DMS010] Length = 219 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 33/195 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G GKT + L + +P P E L Sbjct: 8 RYIVVEGPIGVGKTHLVKRLAESFAG----TILLEQPEQNPFLE---KFYLYPKQSALPT 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + F R+ + + + L + D F+ D +A Q D + + + Sbjct: 61 Q---LSFLMQRVKLGKTLNQDDLFNDLH-IAD-FMVEKDKLFA-QISLDDDELALYNMVY 114 Query: 122 E-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL-D 179 + +++ PD I L + + R+ R + + + +L Sbjct: 115 DNLTLHHRTPDLVIYLQASLPVLKSRISQR---------------GIGYEQHVEEGYLKR 159 Query: 180 IARNQPDRCHIVDSA 194 +A D H D++ Sbjct: 160 LADTYADFFHYYDAS 174 >gi|157364898|ref|YP_001471665.1| deoxynucleoside kinase [Thermotoga lettingae TMO] gi|157315502|gb|ABV34601.1| deoxynucleoside kinase [Thermotoga lettingae TMO] Length = 220 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 23/213 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG GAGKTT I+ + L + E + + + + ++G + Sbjct: 5 IIVEGTVGAGKTTFINYISERLCLEPI-----YELTDSKLIQILENFYIDPS--KWGFQL 57 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ-EISV 125 + + ++ + + CD S +GE ++ L + Sbjct: 58 QIYFLTKRFKQMKIGCEKGNVVMDRSIFCDHIFPSVLLKRGEMTKLEYDIYKELHSNLIE 117 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFE---RKDVMIHEKRRQIFLDIA 181 P+ I L + R++ R L E S +Y+E R+ ++ Sbjct: 118 FSTPPELMIYLKCSTKTAIDRIKKRGRLWELSIDENYWEILNREYEDFF-----GQYSLS 172 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 I++ S +NI+ IV E+ ++ Sbjct: 173 SL-----LIIN-TDSVDERFSNIVQIVEEIFRE 199 >gi|56418247|gb|AAV91061.1| deoxyribonucleoside kinase/thymidine kinase [Grouper iridovirus] Length = 191 Score = 50.0 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 50/224 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M IS G GAGK++ ++ L ++ Y + T L Sbjct: 1 MALPFLISVSGNIGAGKSSLLAALA----KRGY---YVQPEDFTKWGPLFNLALADPKRY 53 Query: 61 EFGAEAEAIVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSSY-----AY-QGERDSSQ 113 +F ++ + ++ + +H N RP +++ +R D AY G + Sbjct: 54 KFSSQLKILMVQMDLQREH-RNGTRP------LVILERASDCVLGFGKVAYDMGLMHMEE 106 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L+ + + + D I+LD P D+ R+ NR D + Sbjct: 107 YRMLEDIH--AKLDAKVDLKILLDTPPDVCRVRIGNR---------DR------EFEQAI 149 Query: 174 RQIFLDIARNQPDRCHIVDSAH-------SFQSVATNILNIVWE 210 +L Q +D+A + V N + ++ + Sbjct: 150 SNEYLTALHAQ-----FIDAADVKLSGLPPKEEVVENFIKLLAQ 188 >gi|331215857|ref|XP_003320608.1| adenylate kinase isoenzyme 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309299598|gb|EFP76189.1| adenylate kinase isoenzyme 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 201 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 38/208 (18%) Query: 11 GIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G GAGK T + L + + G+ + + + Sbjct: 17 GGPGAGKGTQCARLVDQYSFVHLSAGDLLRAEQNRDGSTYGSMIKDYIREGKIVPMQVTI 76 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + EN I A+ +GK RFL + Q ++ + Sbjct: 77 KLL----------ENAIGAAVAQGKT----RFLVDGFPRQMDQAVKFDEDVCQSS----- 117 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLDIA 181 + L P + LKR+ R S RE + +++ E + Sbjct: 118 -----FVLFLTCPEETLLKRLLERGKTSGREDDNEESIKKRFRTFIETSMPVVDYY---- 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 Q + V+S + V I + + Sbjct: 169 -QQKQKVVKVNSDKPIEEVYKEIQDAIK 195 >gi|148377286|ref|YP_001256162.1| deoxyguanosine kinase [Mycoplasma agalactiae PG2] gi|148291332|emb|CAL58715.1| Deoxyguanosine kinase [Mycoplasma agalactiae PG2] Length = 217 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 74/220 (33%), Gaps = 15/220 (6%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60 + I GI G +GK+T + L + Y + P + + Sbjct: 1 MII---GISGMISSGKSTLVKKLSNYYPNSAYIEEFSENDPVFNTFLRWCYEKQPNTDIA 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----LF 116 E++ + + E + + + DRF+ Y + S + Sbjct: 58 FQSFLVESL--TDSFHEQKEKFQKTNSNQNGHMFLDRFILEHYIFAAATLSKKKNKYFEA 115 Query: 117 LDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 D L I PD + +D+ + R+ R E + E +H+ ++ Sbjct: 116 FDKLFSHIYDSNCNPDFALFIDINWETFKSRIFQRGRKVEIDNFNENEEYFKYLHKIYKE 175 Query: 176 IFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQK 214 F+D+A I+DS S V ++ + + +++ Sbjct: 176 TFIDLAAKYNIPYEIIDSNDKSDTDVFIEAVSKIEKHIKE 215 >gi|145490088|ref|XP_001431045.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124398147|emb|CAK63647.1| unnamed protein product [Paramecium tetraurelia] Length = 246 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 84/257 (32%), Gaps = 57/257 (22%) Query: 1 MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC 57 M+ I EG GAGK+T L L+++ EP +L Sbjct: 1 MDKKFIIVSLEGNVGAGKST----LFEILRQEFPKAIFLMEPLEQWQNVHGNPNLNILEK 56 Query: 58 GVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKI--------------------LLC 95 + A +RL + +R + E K+ + Sbjct: 57 YYSDIQRWGFTFQIYAYQSRLMAWDKQLRAVVKEQKLQQIDNQFSSPSTNADDEPILVFT 116 Query: 96 DRFLDSS------YAYQGERDSSQH-----LFLDSLQEISVQEVMPDCTIILDLPVDIGL 144 +R ++S+ Y + F + L E Q ++ DC I ++ P + L Sbjct: 117 ERSIESARELFFKLCYNDGTINELEYHIYEEFYEWLMEHYKQYLV-DCVIYVNTPPETCL 175 Query: 145 KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI--VDSAHS------ 196 +R+ R E+ + +K Q D + ++ I +D+ + Sbjct: 176 ERLTRRGRQEEACVP-------LDYLKKLHQRHEDWLSDNTNKFKIINIDATKNYVKDLD 228 Query: 197 -FQSVATNILNIVWELV 212 ++V +++ + L+ Sbjct: 229 IKEAVRRQLIDEISTLI 245 >gi|124001051|ref|XP_001276946.1| hypothetical protein [Trichomonas vaginalis G3] gi|121918932|gb|EAY23698.1| hypothetical protein TVAG_120360 [Trichomonas vaginalis G3] Length = 209 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 46/188 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK+T +L + L + E P E L+ + + Sbjct: 6 IVVTGPTGSGKSTQCRMLSQLLS-----IDYIHEYIDLPGGEEMLGKLIGGEISMINFQD 60 Query: 67 EAIVFAAARLDHVEN------VIRPALMEGKILLCD---------RFLDSSYAYQGERDS 111 + A + + VI E ++ CD R + + Y G Sbjct: 61 YVL---AKFDEQLAESKTDVFVIERLPEECSMIFCDGDETVLSKARAVQNKYGITGFAGD 117 Query: 112 SQHLFLDS--------LQEI-----SVQEVMP-D---------CTIILDLPVDIGLKRVQ 148 + + +++ L EI + V P D I L D+ ++R++ Sbjct: 118 MKVITINNYGQSPNAVLNEILGTIFGTKNVTPADVQHLANTSGVVIYLKSTPDLCMERMR 177 Query: 149 NRYSLRES 156 R E+ Sbjct: 178 KRGRGPEA 185 >gi|94264707|ref|ZP_01288488.1| hypothetical protein MldDRAFT_4798 [delta proteobacterium MLMS-1] gi|93454873|gb|EAT05120.1| hypothetical protein MldDRAFT_4798 [delta proteobacterium MLMS-1] Length = 502 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 66/220 (30%), Gaps = 43/220 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR-EPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ G +G GKTT L + + R + P R VL Sbjct: 266 IAIVGNDGCGKTTVCEELVSICYKMDPVHINMRTDATVLPWTPTLRSVLKK--------L 317 Query: 66 AEAIVFAAARLDHVENVIRPALME--GKILLCDRF------LDSSYA------Y--QGER 109 A +F R + L + K + RF DS Y R Sbjct: 318 ARVGLFRKNRFFKQAVGLLGELNDVFDKFV---RFRLGMAWADSGLGVTIFERYPTDRVR 374 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 H + I +PD I LD+ + LKR + +D + K Sbjct: 375 GEFPHDIIKW-WPIEQFFPLPDGIIYLDVSPEDTLKRKS-----CDGHTVDEMKSK---- 424 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 R +L + R + D+ S + + + +W Sbjct: 425 ----RDNYLSLLREFSTAFKV-DNGMSKEETISVVKKHLW 459 >gi|215275162|sp|P0C8G0|KTHY_ASFM2 RecName: Full=Truncated thymidylate kinase Length = 208 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 25/173 (14%) Query: 36 HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 P +L E +E +F R + I L I++ Sbjct: 4 IYMHFPNPDTVTGNLIFQVLD-KTVEMSSEQLHKLFTKHRSEFFTE-IAALLKLNFIVIV 61 Query: 96 DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 DR++ S AY + +++ PD T L N+ + Sbjct: 62 DRYIWSGLAYAQA----DGITIET-----KDTFKPDYTFFL----------SSNKPLKEK 102 Query: 156 SACLDY-FERKDVMIHEKRRQIFLDIARNQP-DRCHIVDSAHSFQSVATNILN 206 + FE KD E F+ I + P ++ I+ + + + + +L Sbjct: 103 PFNIQRLFEEKDK--QEIIFNNFITIMNDVPKNKFCIIPAHLNKEIIYNIVLT 153 >gi|167523034|ref|XP_001745854.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775655|gb|EDQ89278.1| predicted protein [Monosiga brevicollis MX1] Length = 306 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 32/220 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-GA 64 F EG++G GK+T L V P A L + A Sbjct: 92 FYVLEGMDGVGKSTATRGLAA---AGIRSVATPTMPW------AQHRALFDAQAEPLRRA 142 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--------GERDSSQHLF 116 A + A + + P L +++ +R + S+ AY G + Sbjct: 143 FYFATNYLAVADETLMEDDDPGLKS-DVVVLERLVGSTVAYATAATAGARGPAMLPRPEA 201 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVM-----I 169 + P I L + + L R+Q+R + + E ++ Sbjct: 202 PEW--RWPADLPRPAGFIWLTVDPQVQLARLQDRAAALTPGETSTNADEEAKLLDAADPY 259 Query: 170 HEKRRQIFLDIARNQPDRCHIVD---SAHSFQSVATNILN 206 ++ + + +D S + + + Sbjct: 260 QATLQEAYARFWAANSN-LPRLDLDTGTLSPDQIQSQVAA 298 >gi|38304046|gb|AAH61985.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 [Rattus norvegicus] gi|149037565|gb|EDL91996.1| rCG55630, isoform CRA_c [Rattus norvegicus] Length = 273 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERD 110 D ++ ++ A+RL + + L G+ ++ +R + S + + QG Sbjct: 40 KSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIR 98 Query: 111 SSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 99 KQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 144 >gi|225711266|gb|ACO11479.1| UMP-CMP kinase [Caligus rogercresseyi] Length = 193 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 35/209 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + +A +L + + E I Sbjct: 11 GGPGAGKGTQCAKIVEK---------------YGFVHLSAGDLLRAERQKKGSEYGELIE 55 Query: 71 FAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 V I AL + I+ RFL + S+ + S+ + + Sbjct: 56 HHIVNGTIVPPAITCALPKNAIVSSSKTRFLIDGF---PRNQSNVDEWETSVAPLVDFKF 112 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF----LDIARNQ 184 + + D ++ ++R +R + D E +KR + L + ++ Sbjct: 113 L----LFFDCKEEVCMERCLSRGAAGSGRSDDNLES-----LKKRIATYMNSTLGVIKSY 163 Query: 185 --PDRCHIVDSAHSFQSVATNILNIVWEL 211 DR VD++ + V + I E+ Sbjct: 164 ETKDRVKRVDASKTVDEVFNDAQKIFDEV 192 >gi|71896025|ref|NP_001026735.1| UMP-CMP kinase [Gallus gallus] gi|82197810|sp|Q5ZKE7|KCY_CHICK RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK gi|53131155|emb|CAG31796.1| hypothetical protein RCJMB04_11f2 [Gallus gallus] Length = 196 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 62/216 (28%), Gaps = 53/216 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A + R G Sbjct: 10 GGPGAGKGTQCARIVEK-----------YGYTHLSAGDLLRDERKRPGS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EG+I+ L R +D + A Q + D+ Sbjct: 48 -------QYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRR 174 LQ + + D + D +I + R R + + E++ + R Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTR 160 Query: 175 ---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 ++ + + VD++ S V ++ I Sbjct: 161 PIIDLYERM-----GKVRRVDASKSVDEVFEKVVQI 191 >gi|307299247|ref|ZP_07579048.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2] gi|306915043|gb|EFN45429.1| deoxynucleoside kinase [Thermotogales bacterium mesG1.Ag.4.2] Length = 201 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 37/223 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I G GAGK+T S + L +++H P E + Sbjct: 2 GRIIVLAGNVGAGKSTIASAIAEGL---GFNIHYES-VSDNPFLE---DFYYDQKRWSYH 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS---SYAYQGER-----DSSQHL 115 + + H ++ A + + DR + +A D Sbjct: 55 LQTYFL-------YHRYCSLKSAEVNENTVF-DRSIYEDKEIFARNLFETGKMSDREFKA 106 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + PD + +D VD L R++ R E+A + E+ + Sbjct: 107 YVTMFDSMIKYLKKPDLLVYIDADVDTILARIRRRGRQMETAVP-------IAYWEQLDR 159 Query: 176 IFLDIARNQP-DRCHIVDSAHSFQSV-----ATNILNIVWELV 212 ++ R+ + +D+ S V A I + ++ Sbjct: 160 LYSSWIRDYDLSPIYKIDA-RSVDIVINPEKAQQITKEIMRIL 201 >gi|303388205|ref|XP_003072337.1| guanylate kinase [Encephalitozoon intestinalis ATCC 50506] gi|303301476|gb|ADM10977.1| guanylate kinase [Encephalitozoon intestinalis ATCC 50506] Length = 184 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 66/211 (31%), Gaps = 49/211 (23%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G G+GK+T IS + + V H TR+P + + + Sbjct: 7 VLTGPSGSGKSTIISHILSRFP-FGFSVSHTTRQPRKGEVNGKDYFFVTTEEFESMVKRQ 65 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E + I+ + +Y Y D + L ++ Sbjct: 66 ELL-----------EYIK--------------YNGNY-YGTGSDQLKVSEKAILMDLEYD 99 Query: 127 EVM------PD-CTIILDLPVDIGLKRVQNRYS--LRESACLDYFERKDVMIHEKRRQIF 177 VM P+ + +D D+ +R++ R RE K + F Sbjct: 100 GVMYCRKNYPNFVVVYIDCDKDVAYERLKKRMENKNREDEVKGRM---------KLYEKF 150 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 I ++ +++D+ HS + I I+ Sbjct: 151 DSIKKDCD---YVIDNTHSLERSKKEIEEII 178 >gi|293363209|ref|ZP_06610093.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] gi|292553068|gb|EFF41817.1| conserved hypothetical protein [Mycoplasma alligatoris A21JP2] Length = 219 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 14/133 (10%) Query: 92 ILLCDRFLDSSYAYQGERDSSQHLFL----DSL-QEISVQEVMPDCTIILDLPVDIGLKR 146 + DRF Y + + D+L ++ + PD I LD+ + KR Sbjct: 88 HIFLDRFSIEHYIFAHVNLQVKGQKYLNGYDALFSKLITKNETPDLAIYLDMSFETFQKR 147 Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVA 201 + +R E +D F +++ ++ D+ A I+D+ + V Sbjct: 148 LFSRGRNVE---VDNF-KQNYDYFLNLYTVYKDLFIKQASKYKLNYVIIDTDNLTEAEVF 203 Query: 202 TNILNIVWELVQK 214 I+ + K Sbjct: 204 NKAKTIIDQFQAK 216 >gi|237653428|ref|YP_002889742.1| deoxynucleoside kinase [Thauera sp. MZ1T] gi|237624675|gb|ACR01365.1| deoxynucleoside kinase [Thauera sp. MZ1T] Length = 212 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/183 (16%), Positives = 60/183 (32%), Gaps = 28/183 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ +I EG GAGKT+ L LQ + P + + Sbjct: 2 LDKARYIVVEGPIGAGKTSLARRLADRLQAEAVFEQAELNPFLGRFYQQ---------SE 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 +G + F R+D + + + + ++ D D + + + S L +L Sbjct: 53 RWGLATQLS-FLFQRIDQLSTL--GPIEGERRVVADFLFDKDHLFAEQNLSPDEL---AL 106 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + PD I L D ++R++ R E + + E+ Sbjct: 107 YRRVHDGLQPANAPRPDLVIYLQARPDTLMERIRKRGLDAERRITE-------LYLEQVA 159 Query: 175 QIF 177 + + Sbjct: 160 ERY 162 >gi|86141818|ref|ZP_01060342.1| deoxynucleoside kinase [Leeuwenhoekiella blandensis MED217] gi|85831381|gb|EAQ49837.1| deoxynucleoside kinase [Leeuwenhoekiella blandensis MED217] Length = 262 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 63/192 (32%), Gaps = 24/192 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKTT S++ K P E F E Sbjct: 66 YIAIEGNIGAGKTTLASMIAEDFNAKLILERFKDNPFLPKFYE-------DKSRYAFPLE 118 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS--SYAYQGERDSSQHLFLDS-LQE 122 F A R + + I + ++ D DS S + S + L L Sbjct: 119 MS---FLADRYQQLLDDIGQYDLFKDFMIAD--YDSQKSLIFAKVTLSEEEYSLYQKLHR 173 Query: 123 ISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I +E+ PD I L D L ++ R E + Q +L++ Sbjct: 174 IMYREIARPDLYIYLYQNTDRLLDNIKKRGRSYEQDI-------SEDYLVEINQGYLNMI 226 Query: 182 RNQPD-RCHIVD 192 +N+ ++D Sbjct: 227 KNKRGSNVKVID 238 >gi|327289187|ref|XP_003229306.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like [Anolis carolinensis] Length = 351 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 14/95 (14%) Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQE 122 ++ A L+H+ L G+ ++ +R S Y + QG + ++ Sbjct: 136 LLQYADALEHL-------LATGQGVILERSPYSDYVFLEAMFNQGYIHKRCIEHYNKIKR 188 Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRES 156 IS+ V+P I +D+PV KR++ R E Sbjct: 189 ISIDPVLPPHLVIYIDVPVSDVRKRIEERGKPYEK 223 >gi|326328036|pdb|3QEO|A Chain A, S74e-R104m-D133a Dck Variant In Complex With L-Deoxythymidine And Udp gi|326328037|pdb|3QEO|B Chain B, S74e-R104m-D133a Dck Variant In Complex With L-Deoxythymidine And Udp Length = 279 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 86/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V V R + + + Sbjct: 43 ISIEGNIAAGKSTFVNILKQL--SEDWEVVPEPVARWSNVQSTQDEFEELTMEQKNGGNV 100 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + R++ +S Sbjct: 101 LQMMYEKPERWSFTFQTYACLSMIRAQLASLNGKLKDAEKPVLFFERSVYSARYIFASNL 160 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 161 YESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 220 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 221 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 276 >gi|225717942|gb|ACO14817.1| Deoxynucleoside kinase [Caligus clemensi] Length = 253 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 71/208 (34%), Gaps = 26/208 (12%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 EG GAGKTT + +++ +V EP R+ LL + ++ Sbjct: 36 VVEGNIGAGKTTFLESIRKSSPPGLIEVV--EEPVQEWRTYKDRYDLLDIMYE--DSKKW 91 Query: 68 AIVFAAARLDHVENVI-----RPALMEGKILLCDRF-LDSSYAYQGERDSSQHLFLDSLQ 121 + +F + RP + + LL RF + G + + L+ L Sbjct: 92 SFLFQIQVQLSMMKKYSLPPTRPIRIMERSLLSARFCFVENLHNNGHLNDIELHTLNDLY 151 Query: 122 EISV----QEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYF----ERKDVMIHE 171 + D I L ++ +R+ ++R +S L++F E + + Sbjct: 152 NFVIKHDCFLCQTDLIIYLRTSPEVAYERMLRRSRSEAEKSLSLEHFRNIHELHEDWLFR 211 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQS 199 K + F + P ++D Sbjct: 212 KTK--FQPL----PCPIVVIDGNQGIDD 233 >gi|307728538|ref|YP_003905762.1| deoxynucleoside kinase [Burkholderia sp. CCGE1003] gi|307583073|gb|ADN56471.1| deoxynucleoside kinase [Burkholderia sp. CCGE1003] Length = 226 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 57/160 (35%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G GKT+ L + + + P P E A+ Sbjct: 19 YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLE---RFYRDTARYALPAQ 71 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + FA R + V A MEG L+ D F+ + +A ++ HL+ Sbjct: 72 ---LHFALQRAQQAQEV-SAAHMEGTPLIAD-FMTQKNDIFARLTLQEDEWHLYRALAAR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFSRIQKRAVPMELQISDAY 166 >gi|145510937|ref|XP_001441396.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408646|emb|CAK73999.1| unnamed protein product [Paramecium tetraurelia] Length = 246 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 42/257 (16%), Positives = 83/257 (32%), Gaps = 57/257 (22%) Query: 1 MNSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC 57 M+ I EG GAGK+T L L+++ EP +L Sbjct: 1 MDKKFIIVSLEGNVGAGKST----LFEILRQEFPKAIFLMEPLEQWQKVHGNPNLNILEK 56 Query: 58 GVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKI--------------------LLC 95 + A +RL + +R E K+ + Sbjct: 57 YYSDIQRWGFTFQIYAYQSRLMAWDRQLRAVAKEQKLQQIDNQFSSPSTNADDEPILVFT 116 Query: 96 DRFLDSS------YAYQGERDSSQH-----LFLDSLQEISVQEVMPDCTIILDLPVDIGL 144 +R ++S+ Y + F + L E Q ++ DC I ++ P + L Sbjct: 117 ERSIESARELFFKLCYNDGTINDLEYHIYEEFYEWLMEHYKQYLV-DCVIYVNTPPETCL 175 Query: 145 KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI--VDSAHS------ 196 +R+ R E+ + +K Q D + ++ I +D+ + Sbjct: 176 ERLTRRGRQEEACVP-------LDYLKKLHQRHEDWLSDNNNKFKIINIDATKNYVKDLD 228 Query: 197 -FQSVATNILNIVWELV 212 ++V +++ + L+ Sbjct: 229 IKEAVRRQLIDEISTLI 245 >gi|330796068|ref|XP_003286091.1| hypothetical protein DICPUDRAFT_54025 [Dictyostelium purpureum] gi|325083910|gb|EGC37350.1| hypothetical protein DICPUDRAFT_54025 [Dictyostelium purpureum] Length = 228 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 63/214 (29%), Gaps = 38/214 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G+ GAGKTT + L + L ++ EP L D Sbjct: 19 IAISGLIGAGKTTLCTALGKVL-----NLPTYYEPV------IDNSYLADFYKDPKSFSF 67 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHL--------F 116 + ++ + + I G + DR + DS +A Sbjct: 68 QLQIYLLNQRFQQQQQIIWQGRGG---VQDRTIYEDSVFAKMLMESGLMDKRDYNTYCKL 124 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +L P+ I LD+ + L+R++ R E + + Q Sbjct: 125 FSNLSNFMR---KPNLIIHLDVSPEQSLERIKRRDRECEKNI-------TLEYLQNLNQA 174 Query: 177 FLDIARNQPDRCHIVDSA----HSFQSVATNILN 206 + + + ++ + +A I Sbjct: 175 YQNFLHDISKYIAVIRVNWSEFQDPEELAQTIKE 208 >gi|224130660|ref|XP_002320896.1| predicted protein [Populus trichocarpa] gi|222861669|gb|EEE99211.1| predicted protein [Populus trichocarpa] Length = 174 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 43/206 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFGAEA 66 G G+GK T + RH+ LL ++ Sbjct: 1 GGPGSGKGTQCPKIVEHF--------------------GFRHLCAGDLLQAEIESESENG 40 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD--RFLDSSYAYQGERDSSQHLFLDSLQEIS 124 I V + I L++ + D RF+ ++ E ++ + Sbjct: 41 TMIQNFKKEGKIVPSEITVKLLQQAMQQSDNKRFIIDGFSRNEENRAAFENIVR------ 94 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181 + P+ + D P + KR+ NR R ++ ++ + E + Sbjct: 95 ---IKPEFVLFFDCPEEELTKRILNRNQGRVDDNIETIGKRLKVYFESTLPVINYY---- 147 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207 N + +D+ S + V ++ ++ Sbjct: 148 -NSKGKVQKIDAQRSIEEVFEDVKSV 172 >gi|149037566|gb|EDL91997.1| rCG55630, isoform CRA_d [Rattus norvegicus] Length = 253 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERD 110 D ++ ++ A+RL + + L G+ ++ +R + S + + QG Sbjct: 40 KSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIR 98 Query: 111 SSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 99 KQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHE 144 >gi|124486291|ref|YP_001030907.1| signal recognition particle-docking protein FtsY [Methanocorpusculum labreanum Z] gi|124363832|gb|ABN07640.1| signal recognition particle-docking protein FtsY [Methanocorpusculum labreanum Z] Length = 337 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT ++ + +LQ + V V G T A A + + C D G + Sbjct: 143 ILFTGVNGTGKTTSVAKIAHYLQSQGLSVVV--GAGDTFRAGAIEQIRVHC--DRLGIKL 198 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A A + + + A ++L D R ++ ++ L++I Sbjct: 199 IAHQEGADPSAVLYDTVEYAKAHKTDVVLAD---------SAGRFHNRVNLMNQLEKI-K 248 Query: 126 QEVMPDCTIILD 137 + + PD +D Sbjct: 249 RVMKPDLVFYVD 260 >gi|2130562|gb|AAB58327.1| signal recognition particle receptor alpha subunit [Thermococcus zilligii] Length = 329 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 49/130 (37%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G G GKTT I+ L +L+++ + V V T A A L G + Sbjct: 135 IAFVGFNGGGKTTTIAKLAHWLKKQGFSVVVAA--SDTFRAGAIEQ--LEEHAKRVGVKV 190 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R+ +D +++I Sbjct: 191 IKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRNELNRNLMDEMKKIV- 240 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 241 RVTKPDLVIF 250 >gi|73975381|ref|XP_539307.2| PREDICTED: similar to Deoxycytidine kinase (dCK) [Canis familiaris] Length = 260 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 40/240 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGT--PAAEA 49 I+ EG +GKTT +++LK+ + ++V E + Sbjct: 24 IAIEGNIASGKTTFVNILKQVCED--WEVVPEPVARWCSVRSAQGDCEELTTSQKSGGNV 81 Query: 50 ARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSY 103 + + F ++ A + + R +++ +P L + + DR++ ++ Sbjct: 82 LQMMYEKPERWSFTFQSYACL-SRIRAQLACLDGKLKDAEKPVLFFERSIYSDRYVFAAN 140 Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 141 LYESECMNETEWTIYQDWHDWMNHQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGI 200 Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ ++ V E + Sbjct: 201 PLEYLEKLHYKHESWLLHRTLKTNF-DFLQEIP--ILTLDINEDFKDKHDGLIEKVKEFL 257 >gi|300867115|ref|ZP_07111781.1| Adenylate kinase [Oscillatoria sp. PCC 6506] gi|300334870|emb|CBN56947.1| Adenylate kinase [Oscillatoria sp. PCC 6506] Length = 188 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 75/216 (34%), Gaps = 49/216 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G GAGK T LL F + E R + + G +A+A Sbjct: 5 FLGPPGAGKGTQAQLLAAFWK-----------IPHISTGEILRACV--VAKTDLGLKAQA 51 Query: 69 IV----FAAAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-Q 121 + R +D V ++ A +L D F R +Q FL+ L Q Sbjct: 52 FMDRGELVPDRVLMDIVRERLKEADASNGWIL-DGF---------PRTVAQATFLEELLQ 101 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-- 179 E + T+ LD+P +I + R+ R ++ +R +++ + Sbjct: 102 EWDRGGIQ---TVNLDVPDEILVVRLLARGRKDDTEETIR----------RRLEVYREQT 148 Query: 180 --IARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211 + DR VD S ++V +I ++ Sbjct: 149 APLIGFYGDRHQLITVDGDRSLEAVTADIQQLLEPA 184 >gi|288930433|ref|YP_003434493.1| signal recognition particle-docking protein FtsY [Ferroglobus placidus DSM 10642] gi|288892681|gb|ADC64218.1| signal recognition particle-docking protein FtsY [Ferroglobus placidus DSM 10642] Length = 326 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L L + V + G T A A L + G Sbjct: 134 IIFVGVNGTGKTTTIAKLAYRLLKSGKSVVLAA--GDTFRAGAIEQ--LEEHGKKLGVRV 189 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A +G ++L D R ++ +D L++I Sbjct: 190 IKHKPGADPAAVIYDAIKHAESKGIDVVLSD---------TAGRMHTKKNLIDQLEKI-K 239 Query: 126 QEVMPDCTIILD 137 + PD TI +D Sbjct: 240 RVTNPDLTIFVD 251 >gi|212223740|ref|YP_002306976.1| signal recognition particle GTPase [Thermococcus onnurineus NA1] gi|212008697|gb|ACJ16079.1| signal recognition particle GTPase [Thermococcus onnurineus NA1] Length = 301 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G G+GKTT I+ L +L++ V + T A A V G + Sbjct: 107 IAFVGFNGSGKTTTIAKLAHWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 162 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I A G ++L D R+ +D +++I Sbjct: 163 IKHSYGADPAAVAYDAIGHAKARGIDVVLID---------TAGRNELNRNLMDEMKKIV- 212 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 213 RVTKPDLVIF 222 >gi|296109711|ref|YP_003616660.1| signal recognition particle-docking protein FtsY [Methanocaldococcus infernus ME] gi|295434525|gb|ADG13696.1| signal recognition particle-docking protein FtsY [Methanocaldococcus infernus ME] Length = 370 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 32/130 (24%), Positives = 49/130 (37%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT I+ L L+ K Y V + G T A A L G + Sbjct: 166 IVFVGINGTGKTTSIAKLAYKLKNKGYSVVLAA--GDTFRAGAIEQ--LEEHAKRIGVKV 221 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A + ++L D R ++ +D +++ V Sbjct: 222 IKQKPGADAAAVIYDAIQHAKAKKIDVVLAD---------TAGRQATNINLMDEIKK-VV 271 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 272 RVTKPDLVIF 281 >gi|242279965|ref|YP_002992094.1| adenylylsulfate kinase and related kinase-like protein [Desulfovibrio salexigens DSM 2638] gi|242122859|gb|ACS80555.1| Adenylylsulfate kinase and related kinase-like protein [Desulfovibrio salexigens DSM 2638] Length = 202 Score = 49.6 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 48/219 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ GK+T L L+ + V + + R + + Sbjct: 15 IWITGLPACGKSTIARKLYDKLRAEGVKVVLLCM-------DDRRKIYIPNPEYTCDERQ 67 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 A + G+ ++ D A++ + ++ E Sbjct: 68 RAYNLF-------VEDALSIMQSGRCVILD-----GSAHELCWRNDAREKIEFFAE---- 111 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI--FLDI---- 180 + L PV++ +KR R A L +E+ E++R F D+ Sbjct: 112 -------VYLRCPVNMAMKRESGRQQGLVMAGL--YEKA----LERQRTGKEFKDLGEVI 158 Query: 181 -----ARNQPDRCHIVD-SAHSFQSVATNILNIVWELVQ 213 + + IVD + + + + + + Sbjct: 159 GVDVKFQEDNNAECIVDTAGKNPDETFEEVQACLQKWRK 197 >gi|268317555|ref|YP_003291274.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252] gi|262335089|gb|ACY48886.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252] Length = 227 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 30/223 (13%), Positives = 65/223 (29%), Gaps = 38/223 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG+ G GKTT L+ + P E + + Sbjct: 14 RYLVIEGVIGVGKTTLARLIAERFGGRLILEEFEENPFLPRFYE---------DPERWAF 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123 + A+ + ++R ++ D D + L L ++L + Sbjct: 65 HTQLSFLASRFRQQKQLLLRDLF--HPFVVSDYAFDKDRIFARINLKGDELQLYETLYTL 122 Query: 124 SVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD + L D L+ ++ R E ER + + Sbjct: 123 MEPNVPTPDLIVYLQSTPDRLLENIRKRGRPYEQ----RIERSYLE----------ALCE 168 Query: 183 NQPDRC--------HIVDSAHSFQSVA--TNILNIVWELVQKR 215 IV++ V ++ ++ +++++R Sbjct: 169 AYDHYFFHYTKGPLLIVNAVQ-IDFVKNPEDLEELIRQILERR 210 >gi|255629285|gb|ACU14987.1| unknown [Glycine max] Length = 207 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 61/213 (28%), Gaps = 57/213 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + Y A + R + S + Sbjct: 27 GGPGSGKGTQCANIVENF---GY--------THLSAGDLLRAEIKSGSENG--------- 66 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I+ + EGKI+ S A Q + + Sbjct: 67 ----------TMIQNMIKEGKIV------PSEVTIKLLQKAMQESGNDKFLIDGFPRNEE 110 Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + + P + + P + +R+ +R RE ++ R+ + E Sbjct: 111 NRAAFEKVTGIEPAFVLFFECPEEEMERRLLSRNQGREDDNIETIRRRFKVFLESSLPVI 170 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + + +D+A + V + I Sbjct: 171 NYY-----DAKGKVRKIDAARPIEEVFETVKGI 198 >gi|297585305|ref|YP_003701085.1| hypothetical protein Bsel_3038 [Bacillus selenitireducens MLS10] gi|297143762|gb|ADI00520.1| hypothetical protein Bsel_3038 [Bacillus selenitireducens MLS10] Length = 410 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 14/141 (9%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G +G GK++ I +++ + K +++ G + V + + Sbjct: 219 GTDGTGKSSLIKNIRKEIPVKTKSIYL----GTGEDGWELKQVKKMNKNFQGPILGRLLK 274 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 ++ VIR + K++L DRF G S++ + + +I + Sbjct: 275 TIILPIEFCLRVIRGKVNAKYKLILIDRFP-------GWAIISKNKLRNYIYKIIL--PK 325 Query: 130 PDCTIILDLPVDIGLKRVQNR 150 PD I L I +R + R Sbjct: 326 PDLVIFLHGDPQILFERKKER 346 >gi|295675597|ref|YP_003604121.1| deoxynucleoside kinase [Burkholderia sp. CCGE1002] gi|295435440|gb|ADG14610.1| deoxynucleoside kinase [Burkholderia sp. CCGE1002] Length = 226 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GKT+ L + + P E + Sbjct: 19 YIAIEGPIGVGKTSLARRLAQRWSMH----ELFERWQDNPFLE---RFYRDTARYALPVQ 71 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + FA R + V A G L+ D F+ + +A ++ L+ Sbjct: 72 ---LHFALQRAQQAQEV-SAAQASGTPLIAD-FITQRNDIFARLTLQEDEWLLYRALAAR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 127 LDVSAPEPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166 >gi|218132359|ref|ZP_03461163.1| hypothetical protein BACPEC_00218 [Bacteroides pectinophilus ATCC 43243] gi|217992697|gb|EEC58699.1| hypothetical protein BACPEC_00218 [Bacteroides pectinophilus ATCC 43243] Length = 235 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 38/138 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRF------------LQRKN-------------------- 32 + IS G +G GK+T + LL L+ N Sbjct: 1 MVISLSGYDGMGKSTSVDLLMEKICENHGLKGMSALKANNGTEVYENIEQVDDIYKVLSR 60 Query: 33 YDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAARLDH---VENVIRPAL 87 YDV TR + + + +++ D F E I V AAR + ++VI L Sbjct: 61 YDVITTRFYFRSNKMQKLQEMVMFAETDVFD-NTELIKEVTDAARQEAQIWYDHVIWKLL 119 Query: 88 MEGKILLCDRFLDSSYAY 105 + KI++ DR+ AY Sbjct: 120 RKNKIIIYDRYYYDEIAY 137 >gi|167040398|ref|YP_001663383.1| guanylate kinase [Thermoanaerobacter sp. X514] gi|256752265|ref|ZP_05493128.1| guanylate kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300914482|ref|ZP_07131798.1| guanylate kinase [Thermoanaerobacter sp. X561] gi|307724282|ref|YP_003904033.1| guanylate kinase [Thermoanaerobacter sp. X513] gi|166854638|gb|ABY93047.1| Guanylate kinase [Thermoanaerobacter sp. X514] gi|256748833|gb|EEU61874.1| guanylate kinase [Thermoanaerobacter ethanolicus CCSD1] gi|300889417|gb|EFK84563.1| guanylate kinase [Thermoanaerobacter sp. X561] gi|307581343|gb|ADN54742.1| guanylate kinase [Thermoanaerobacter sp. X513] Length = 207 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 67/214 (31%), Gaps = 41/214 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G GAGK T L + + TR+P E + S Sbjct: 6 KKGLLIVLSGPSGAGKGTICKALMEKEKDLKLSISATTRQPRSGEI-EGKNYFFKSEEEF 64 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E E ++ + A H ++ + L EG ++ L Sbjct: 65 EKMIENDSFLEWAKVYGHYYGTPKDFVLKNLDEGNDVV--------------------LE 104 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +D + ++E P+ I LP + R++ R + E + F+ Sbjct: 105 IDIQGALKIKEKFPEGVFIFILPPSMEELKNRIKKRGTETEEEIIKRFKS---------- 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ +++ S + I I+ Sbjct: 155 -AYEELNYVSRYNYVVIN--DSVEEAVEKIKAII 185 >gi|332159470|ref|YP_004424749.1| putative kinase [Pyrococcus sp. NA2] gi|331034933|gb|AEC52745.1| putative kinase [Pyrococcus sp. NA2] Length = 180 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 57/215 (26%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G GKTT LL L Y+ R L G Sbjct: 1 MLIAITGTPGVGKTTIAKLLAERL---GYEYV------------NLRDFALEKGCGRK-- 43 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 V + + + E AY ER+ D++ + Sbjct: 44 --------------VNDEVEVEIDE-------------LAYFVEREFKGK---DAILDGH 73 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +MP D I+L + I +R++ R +E + E + V L A + Sbjct: 74 LSHLMPVDLVIVLRVHPGIIGERLKKRGYSKEKIGEN-VEAELVD-------AILIEAID 125 Query: 184 QPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + + VD+ + + V IL ++ V++R+ Sbjct: 126 EHENVIEVDTTNKTPEEVVNEILELINSGVKRRIG 160 >gi|228985664|ref|ZP_04145817.1| uridine kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774059|gb|EEM22472.1| uridine kinase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 187 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 35/212 (16%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 2 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDSYH 42 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+ + ++ E V+ P + + + L+ D S+ Y Sbjct: 43 FDICP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IILDYPFAY 92 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L Q + D TI +D P+DI + R R E+ + + K + + R+ +L+ Sbjct: 93 LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSAIHNDLKHYITYA--RKAYLE 148 Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D A S + I ++ Sbjct: 149 ALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180 >gi|258651388|ref|YP_003200544.1| adenylate kinase [Nakamurella multipartita DSM 44233] gi|258554613|gb|ACV77555.1| adenylate kinase [Nakamurella multipartita DSM 44233] Length = 181 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 33/207 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVDE 61 L I G +GAGK T SLL L T + +L+ + Sbjct: 3 LLIV--GPQGAGKGTQASLLAEHL---GIPHISTGDIFRANVGAGTELGVLAKTYMDAGD 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + AAR D P G L D F + + D + ++ + Sbjct: 58 LVPDEVTVAMVAARFD------EPDAGRGF--LLDGFPRTV----PQADKLGEILIERGE 105 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ D I+L++P +I L+R+ R ++A R+ + H + + Sbjct: 106 DV-------DKVILLEVPDEILLERMLARGRADDTAEA--ISRRLELYHTET----KPLL 152 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + +D V I + Sbjct: 153 DFYAGKLVEIDGVGEIDEVQQRIRTAL 179 >gi|224510667|pdb|3EXK|A Chain A, Human Dck R104mD133A IN COMPLEX WITH L-Dt And Adp gi|240104636|pdb|3HP1|A Chain A, Crystal Structure Of Human Dck R104mD133A IN COMPLEX WITH L-Dt And Adp Length = 280 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 85/239 (35%), Gaps = 38/239 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + ++V V R + + + Sbjct: 44 ISIEGNIAAGKSTFVNILKQLCED--WEVVPEPVARWCNVQSTQDEFEELTMSQKNGGNV 101 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R +++ +P L + + R++ +S Sbjct: 102 LQMMYEKPERWSFTFQTYACLSMIRAQLASLNGKLKDAEKPVLFFERSVYSARYIFASNL 161 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + Q + D I L + L R+ R E Sbjct: 162 YESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIP 221 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 L+Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 222 LEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 277 >gi|312076083|ref|XP_003140703.1| deoxynucleoside kinase [Loa loa] gi|307764137|gb|EFO23371.1| deoxynucleoside kinase [Loa loa] Length = 441 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 58/181 (32%), Gaps = 26/181 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAA-------- 50 I EG G+ K+ L L + + +V + R Sbjct: 79 KLIVVEGNIGSNKSDMARSLADRLGFYFIPEFQMDEVLIDRFGNDYRNYYHLFPKSFRLF 138 Query: 51 --RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 DE + I+ + D N + + G+ ++ +R + + + Sbjct: 139 DMNMFYKDPFNDETAKMRDRIL--RCKFDQYLNAVAHVMNTGQGVVLERTPHTDFIFANA 196 Query: 109 RDSSQHL--------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ +++ I P I LD+PVD L+ ++ + S + A +D Sbjct: 197 CRVKNYIGPEYFTYYYIERKNMIPNCRFWPHLVIYLDVPVDKCLENIRQKGSTDKIAVVD 256 Query: 161 Y 161 Sbjct: 257 R 257 >gi|227878414|ref|ZP_03996354.1| deoxyadenosine kinase [Lactobacillus crispatus JV-V01] gi|227861943|gb|EEJ69522.1| deoxyadenosine kinase [Lactobacillus crispatus JV-V01] Length = 244 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 52/166 (31%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 34 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDNNP------------VLPLYYKDMKRYT 81 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD----------SSYAYQGERDSSQHLF 116 + L+H I A+ E + DR + S Sbjct: 82 --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 138 Query: 117 LDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 LD++ E + PD I + + +D L R++ R E D Sbjct: 139 LDNMMEDTPGNPSKKPDLLIYIHVSLDTMLNRIKKRGRSFEQISTD 184 >gi|328765851|gb|EGF75955.1| hypothetical protein BATDEDRAFT_93182 [Batrachochytrium dendrobatidis JAM81] Length = 185 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 68/213 (31%), Gaps = 56/213 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS G+ GAGKTT + L L+ R +L E + Sbjct: 15 ISIAGVSGAGKTTIATQLNERLKNS-------------------RKLLFDEYDFEGPDDI 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 V R + + L + D + L + L I + Sbjct: 56 IDWV---DRGANYDEWNLSPL------ISD---------------LEALLTEPLNYIVLD 91 Query: 127 EVMP----------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D TI +D P+DI + R R S + FE K+ + R+ Sbjct: 92 FPFAYKHSMTSNLIDFTIYIDTPLDIAMARRVIRDFRNSSTEIILFEMKNYITQG--RRG 149 Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208 ++++ ++ +P+ IV + I ++ Sbjct: 150 YIEMIKSIRPNSDIIVAGTLPLSKIIEKICEVI 182 >gi|18977506|ref|NP_578863.1| putative kinase [Pyrococcus furiosus DSM 3638] gi|46397232|sp|Q8U1S1|KAD6_PYRFU RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|18893211|gb|AAL81258.1| hypothetical protein PF1134 [Pyrococcus furiosus DSM 3638] Length = 180 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 57/215 (26%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G GKTT L L R+ A + DE Sbjct: 1 MIIAITGTPGVGKTTVARKLAEKL---GCKYVNLRD-------FALEKGIGEVKGDELEV 50 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + + + VE + GK ++ D Sbjct: 51 EVDELAYF------VEKEFK-----GKNVVLDGH-------------------------- 73 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + +MP D I+L +R++ R ++ + E + V + L A + Sbjct: 74 LSHLMPADLVIVLRAHPKTIAERLKERGYSKDKIGEN-VEAELVDVI-------LIEALD 125 Query: 184 QPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + + VD+ + + V ILN++ +++RV Sbjct: 126 EHENVIEVDTTGKTPEEVVNEILNLINSGIKRRVG 160 >gi|290890353|ref|ZP_06553429.1| hypothetical protein AWRIB429_0819 [Oenococcus oeni AWRIB429] gi|290479971|gb|EFD88619.1| hypothetical protein AWRIB429_0819 [Oenococcus oeni AWRIB429] Length = 212 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 37/187 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT L+ L EP P A+ L ++G ++ Sbjct: 3 GVGKTTLTKLISEHLGT---------EPFYEPVADNPVLPLYYSNPKQYGFL--LQIYFL 51 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-SQHLFLDSLQEI------S 124 R + I+ AL + +L DR + D+ + Q D ++ E+ Sbjct: 52 NRRFSM---IKAALADDNNVL-DRSIYEDALFTEQNHLDGNISDQEMNVYNELLNNMMSE 107 Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD I D + L R++ R E F+ + R + + Sbjct: 108 LKGLKKKAPDLMIYADTDFETILYRIKKRARPYEQ-----FDNNPSL-----RDYYHKMW 157 Query: 182 RNQPDRC 188 Sbjct: 158 AAYKQWY 164 >gi|116490891|ref|YP_810435.1| deoxynucleoside kinase [Oenococcus oeni PSU-1] gi|116091616|gb|ABJ56770.1| Deoxynucleoside kinase [Oenococcus oeni PSU-1] Length = 219 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 37/187 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT L+ L EP P A+ L ++G ++ Sbjct: 10 GVGKTTLTKLISEHLGT---------EPFYEPVADNPVLPLYYSNPKQYGFL--LQIYFL 58 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-SQHLFLDSLQEI------S 124 R + I+ AL + +L DR + D+ + Q D ++ E+ Sbjct: 59 NRRFSM---IKAALADDNNVL-DRSIYEDALFTEQNHLDGNISDQEMNVYNELLNNMMSE 114 Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD I D + L R++ R E F+ + R + + Sbjct: 115 LKGLKKKAPDLMIYADTDFETILYRIKKRARPYEQ-----FDNNPSL-----RDYYHKMW 164 Query: 182 RNQPDRC 188 Sbjct: 165 AAYKQWY 171 >gi|114330195|ref|YP_746417.1| sulfate adenylyltransferase/adenylyl-sulfate kinase [Nitrosomonas eutropha C91] gi|114307209|gb|ABI58452.1| adenylylsulfate kinase [Nitrosomonas eutropha C91] Length = 565 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 20/97 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I G+ G+GK+T + L++ L + R +L Sbjct: 393 HKGKVIWLTGLSGSGKSTIANALEKELHSQGK-----------------RTYILDGDNMR 435 Query: 62 FGAEAEAIVFAAARLD---HVENVIRPALMEGKILLC 95 G + A R++ V V + + G I++ Sbjct: 436 HGLNKDLGFTNADRVENIRRVAEVAKLMMDAGLIVIT 472 >gi|312864482|ref|ZP_07724713.1| deoxyguanosine kinase [Streptococcus downei F0415] gi|311099609|gb|EFQ57822.1| deoxyguanosine kinase [Streptococcus downei F0415] Length = 213 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 41/233 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L V +L + Sbjct: 1 MLIVLAGTIGAGKSSLAASLGEHL---GTQVFYEAVDNNP---------VLDLYYQDPKK 48 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL 117 A + F R I+ A +L DR + + Y+ + L + Sbjct: 49 YAFLLQIFFLNKRFQS----IKAAYKADNNIL-DRSIFEDELFLTLNYKNGNVTKTELDI 103 Query: 118 ------DSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L+E+ + + PD + +D+ D L+R+ R E + + + Sbjct: 104 YKELLANMLEELEGMPKKSPDLLVYIDVSFDKMLERISKRGRSFEQNADNP---ELYEYY 160 Query: 171 EKRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 ++ + D N P +D V + L V++LV + L Sbjct: 161 QQVHGEYPDWYENYSVSPK--IRIDGNK-LDFVKNPDDLQTVFDLVDSELKKL 210 >gi|325957719|ref|YP_004293131.1| deoxyadenosine kinase [Lactobacillus acidophilus 30SC] gi|325334284|gb|ADZ08192.1| deoxyadenosine kinase [Lactobacillus acidophilus 30SC] gi|327184367|gb|AEA32814.1| deoxyadenosine kinase [Lactobacillus amylovorus GRL 1118] Length = 215 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKNMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + L+H I A+ + + DR + D+ + A D ++ D L Sbjct: 53 --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADNKVADPTEFKIYDDL 109 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E +++ PD I + + +D LKR++ R E D Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLKRIKKRGRSFEQISTD 155 >gi|225012276|ref|ZP_03702713.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Flavobacteria bacterium MS024-2A] gi|225003831|gb|EEG41804.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Flavobacteria bacterium MS024-2A] Length = 373 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 24/182 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G GK+T L + + P E Sbjct: 178 YIVVEGNIGVGKSTLTKKLGAQYKAEILLETFVDNP-------YLASFYKDPKKYALAVE 230 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQEI 123 F RL + + ++ D FL+ S + + S + + + Sbjct: 231 T---FFLNDRLAQTAQFWKHNSTK---VVSDYFLNKSLVFATQNLSKDDFIIYQEEFSKA 284 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQIFLDIAR 182 ++V P + L V K+++ R FE++ K + + + + Sbjct: 285 IKKQVNPTLMVYLHAEVPHLQKQIKKRGRP--------FEKEIQADYLMKIAKGYEKLIQ 336 Query: 183 NQ 184 Sbjct: 337 TD 338 >gi|283436150|ref|NP_001164443.1| adenylate kinase 1 [Apis mellifera] Length = 192 Score = 49.3 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 35/86 (40%), Gaps = 5/86 (5%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDIARNQPDRC 188 D I D +I KR+ R + + A D E + + + R +I + D+ Sbjct: 109 DLIIFFDASSEILEKRLLGRAEVLKRAD-DNQETIKNRIKLFNMNRHA--EIIEHYKDKV 165 Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214 +D+ + + ++ ++ L+ + Sbjct: 166 VKIDANGNEDEIFDEVVKVINTLLNE 191 >gi|329571695|gb|EGG53376.1| shikimate kinase [Enterococcus faecalis TX1467] Length = 168 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMPHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR+ + +++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIAEDTENQRPLAIEHSSKEIITLFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 S + + IL + E Sbjct: 151 TNRSPEEIINEILQQLKE 168 >gi|118586309|ref|ZP_01543763.1| deoxyguanosine kinase/deoxyadenosine kinase, I subunit [Oenococcus oeni ATCC BAA-1163] gi|118433272|gb|EAV39984.1| deoxyguanosine kinase/deoxyadenosine kinase, I subunit [Oenococcus oeni ATCC BAA-1163] Length = 219 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 37/187 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT L+ L EP P A+ L ++G ++ Sbjct: 10 GVGKTTLTKLISEHLGT---------EPFYEPVADNPVLPLYYSNPKQYGFL--LQIYFL 58 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS-SQHLFLDSLQEI------S 124 R + I+ AL + +L DR + D+ + Q D ++ E+ Sbjct: 59 NRRFSM---IKAALADDNNVL-DRSIYEDALFTEQNHLDGNISDQEMNVYNELLNNMMSE 114 Query: 125 VQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ + PD I D + L R++ R E F+ + R + + Sbjct: 115 LKGLKKKAPDLMIYADTDFETILYRIKKRARPYEQ-----FDNNPSL-----RDYYHKMW 164 Query: 182 RNQPDRC 188 Sbjct: 165 AAYKQWY 171 >gi|288919598|ref|ZP_06413927.1| pantothenate kinase protein [Frankia sp. EUN1f] gi|288348996|gb|EFC83244.1| pantothenate kinase protein [Frankia sp. EUN1f] Length = 231 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 25/156 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFGAE 65 ++ +G + AGKTT L L + V G P R LS Sbjct: 34 VAIDGPDAAGKTTLADELAGILTDRGRPVIRASVDGFHQPQTTRRRRGSLSPQGYFLD-- 91 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY-----------AYQGERDSSQH 114 A + A R H+ + + PA R+ +++ A + D+ Sbjct: 92 --AFDYTALRR-HLLDPLSPAGDR-------RYRTAAFDHLHDSPLDSPAREAPSDAVLI 141 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + L ++ D T+ L + L+R R Sbjct: 142 VDGVFLLRDQLRSCW-DLTVFLQISPAESLRRALQR 176 >gi|148708064|gb|EDL40011.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10, isoform CRA_a [Mus musculus] Length = 273 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERD 110 D ++ ++ A+RL + + L G+ ++ +R + S + + QG Sbjct: 40 KSNDGNSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGYIR 98 Query: 111 SSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E + P I +D+PV R+Q + E Sbjct: 99 KQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVPEVQSRIQKKGDPHE 144 >gi|145534776|ref|XP_001453132.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420832|emb|CAK85735.1| unnamed protein product [Paramecium tetraurelia] Length = 768 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 79/223 (35%), Gaps = 29/223 (13%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 S EG GAGK+T L L+ + EP L+ + + Sbjct: 553 SLEGNIGAGKST----LFEILKEEYPQAIFLMEPLEQWQKINGNSN-LNILEKYYSDARQ 607 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLD------- 118 V+ ++ ++ ++ +R ++S+ +Q + + ++ Sbjct: 608 VGVYFLNLRLLIQINGLGQIIAIVLVFTERSIESARELFFQLCCNDGKISQIEFEIYEEF 667 Query: 119 --SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L Q ++ DC I ++ P ++ L+R+ R E+ + K Q Sbjct: 668 YQWLMNHYQQYLI-DCVIYVNTPPEVCLERLIKRGRSEEACVP-------LDYLRKLHQR 719 Query: 177 FLDIARNQPDRCHI--VDSAHSF---QSVATNILNIVWELVQK 214 D + +R +D+ ++ Q V ++ ++ +QK Sbjct: 720 HEDWLSEKSNRFLTIKIDATLNYVQDQKVKESVRQLLLSEIQK 762 >gi|251781584|ref|YP_002995885.1| deoxyadenosine kinase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390212|dbj|BAH80671.1| deoxyadenosine kinase [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 229 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 39/232 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV P + Sbjct: 17 MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 63 KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 121 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 122 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 177 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 + + + P +D S V + L V ++V ++ L Sbjct: 178 QVHGEYPTWYEDYKVSPK--MKIDGN-SLDFVQNPDDLATVLQMVDDKLKEL 226 >gi|195998824|ref|XP_002109280.1| hypothetical protein TRIADDRAFT_53152 [Trichoplax adhaerens] gi|190587404|gb|EDV27446.1| hypothetical protein TRIADDRAFT_53152 [Trichoplax adhaerens] Length = 463 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 58/243 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + G G+GK+T LL + Q N V V A + L GV Sbjct: 251 VVLLGPTGSGKSTQADLLSKKYQLINVCVDSLVKEAIVKQSKAGNGIKLYLDRGVAAPD- 309 Query: 65 EAEAIVFAAARLDHVEN--VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A++F V+ + +G +L G + + Sbjct: 310 ---ALMF-----QLVKERLCQLDCIKKG-WVL-----------HGYPRTREQAV-----R 344 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYF----ER 164 ++ + P+ LD+P D L+R+ R + R + + Sbjct: 345 MAEIGLEPNRVFALDIPTDSILERLSLRGTDPITGARYHMHYNPPRTNEIASRLRTHPDD 404 Query: 165 KDVMIHEKR--RQIFL-DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + I ++ QIF+ DI + +++ ++ ++ + VSPL Sbjct: 405 TEDAIMKRLSAYQIFIDDICEFYGNTIKHINADQDPHTIFESLEAGI-------VSPLPV 457 Query: 222 KKD 224 + D Sbjct: 458 RPD 460 >gi|332026734|gb|EGI66843.1| Deoxynucleoside kinase [Acromyrmex echinatior] Length = 247 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 33/212 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + EG G+GKTT +S K+F +V V EP ++L + Sbjct: 15 VCVEGNIGSGKTTFLSHFKKF-----DNVTVLEEPVELWRDVCGTNLL---ELMYSEPSR 66 Query: 67 EAIVFAAARLDHVENVIRPALMEGKI----LLCDRFLDSSYAY------QGERDSSQHLF 116 A +F + L K + +R + S+ + + Sbjct: 67 YAFLF-----QSYVQLTMLQLHTCKTPSPYTIMERSVYSAMCFVENLKRNNILRDVEVTI 121 Query: 117 LDSLQEISVQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173 L++ + ++ + D + L +I +R++ R E+A L+Y ++ IH+ Sbjct: 122 LENWYDWCLKNANIETDLIVYLRTTPEIVYERMKQRGRKEENAISLEYLKQ----IHQ-V 176 Query: 174 RQ--IFLDIARNQPDRCHIVDSAHSFQSVATN 203 ++ I + P ++ + Sbjct: 177 HDDWLYHQILKPLPSPVITINGDRELHEMVEE 208 >gi|295425798|ref|ZP_06818479.1| deoxyadenosine kinase [Lactobacillus amylolyticus DSM 11664] gi|295064491|gb|EFG55418.1| deoxyadenosine kinase [Lactobacillus amylolyticus DSM 11664] Length = 225 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 54/167 (32%), Gaps = 29/167 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 15 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDNNP------------VLPLYYKDMKRYT 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYAYQGERDSSQHL 115 + L+H I A+ E + DR +DS A Sbjct: 63 --FLLNTYLLNHRLAQINQAVQEKNSV-SDRSIYEDALFFKMNVDSKIA-DPTEFKIYDD 118 Query: 116 FLDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L+++ E + PD I + + +D L R++ R E D Sbjct: 119 LLENMMEDTPGNPSKKPDLLIYIHVSLDTMLARIKKRGRSFEQISTD 165 >gi|302792633|ref|XP_002978082.1| hypothetical protein SELMODRAFT_5337 [Selaginella moellendorffii] gi|300154103|gb|EFJ20739.1| hypothetical protein SELMODRAFT_5337 [Selaginella moellendorffii] Length = 188 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 63/220 (28%), Gaps = 46/220 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVD 60 I F G G GK T L + Y T + G+ + ++ + Sbjct: 1 IVFLGGPGCGKGTQCEELV---RDFGYSHLSTGDLLRAEVASGSELGKQCDTLMKEGKLV 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + A+ + K C RFL + +D Sbjct: 58 PLDVTINLL--------------KQAMGKAK---CKRFLIDGF----------PRAVDQA 90 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD------YFERKDVMIHEKRR 174 E + PD + LD +++ KR+ R A + FE + + Sbjct: 91 HEFEAKVGKPDVVLCLDCSLELMEKRLLQRGKASGRADDNIETIKKRFETF-LAESKPVI 149 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + ++ P + + V ++ + +K Sbjct: 150 DYYR---KSLPKAVKTIPTDKMPDEVYADVKAALKATAEK 186 >gi|323126377|gb|ADX23674.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 213 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 39/232 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 47 KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 + + + P +D S V + L V ++V ++ L Sbjct: 162 QVHGEYPTWYEDYKVSPK--MKIDGN-SLDFVQNPDDLATVLQMVDDKLKEL 210 >gi|15921836|ref|NP_377505.1| hypothetical protein ST1542 [Sulfolobus tokodaii str. 7] gi|15622623|dbj|BAB66614.1| 168aa long hypothetical protein [Sulfolobus tokodaii str. 7] Length = 168 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 28/179 (15%) Query: 43 GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102 G ++ R+++ F + + D VEN ++P+L G I L D ++ + Sbjct: 6 GERISQVKRNIV-------FERRTLFLAYVTDLADQVENYVKPSLDSGFIALADGYILTL 58 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLD 160 ++ G + +++ + I + I L + +KR+ +++ LD Sbjct: 59 MSW-GLVRGLEKDWMNDVLSIFPRSA-----IYFSLISRPEEIIKRI-----IKKRGFLD 107 Query: 161 YFERK-DVMIHEKRRQIFLDIARNQPDRCH-------IVDSAHSFQSVATNILNIVWEL 211 D+ I + D I+ + +F V I+N + L Sbjct: 108 PLSAGIDICIKSDVFTAYEDYINEFQKVLISLSTKESIIYTDRNFDEVHKEIVNKIESL 166 >gi|256843875|ref|ZP_05549362.1| deoxyadenosine kinase [Lactobacillus crispatus 125-2-CHN] gi|256849565|ref|ZP_05554997.1| deoxyadenosine kinase [Lactobacillus crispatus MV-1A-US] gi|262046233|ref|ZP_06019196.1| deoxyadenosine kinase [Lactobacillus crispatus MV-3A-US] gi|293381343|ref|ZP_06627345.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1] gi|295693852|ref|YP_003602462.1| deoxyadenosine kinase [Lactobacillus crispatus ST1] gi|312984064|ref|ZP_07791412.1| deoxyadenosine kinase [Lactobacillus crispatus CTV-05] gi|256613780|gb|EEU18982.1| deoxyadenosine kinase [Lactobacillus crispatus 125-2-CHN] gi|256713681|gb|EEU28670.1| deoxyadenosine kinase [Lactobacillus crispatus MV-1A-US] gi|260573563|gb|EEX30120.1| deoxyadenosine kinase [Lactobacillus crispatus MV-3A-US] gi|290922090|gb|EFD99090.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1] gi|295031958|emb|CBL51437.1| Deoxyadenosine kinase [Lactobacillus crispatus ST1] gi|310894566|gb|EFQ43640.1| deoxyadenosine kinase [Lactobacillus crispatus CTV-05] Length = 215 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 52/166 (31%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDNNP------------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD----------SSYAYQGERDSSQHLF 116 + L+H I A+ E + DR + S Sbjct: 53 --FLLNTYLLNHRLAQINQAIQEKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109 Query: 117 LDSLQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 LD++ E + PD I + + +D L R++ R E D Sbjct: 110 LDNMMEDTPGNPSKKPDLLIYIHVSLDTMLNRIKKRGRSFEQISTD 155 >gi|300860404|ref|ZP_07106491.1| shikimate kinase [Enterococcus faecalis TUSoD Ef11] gi|295112989|emb|CBL31626.1| shikimate kinase [Enterococcus sp. 7L76] gi|300849443|gb|EFK77193.1| shikimate kinase [Enterococcus faecalis TUSoD Ef11] gi|315144411|gb|EFT88427.1| shikimate kinase [Enterococcus faecalis TX2141] gi|315160439|gb|EFU04456.1| shikimate kinase [Enterococcus faecalis TX0645] Length = 168 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 41/198 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT L L+ + D L+ E AA Sbjct: 11 GAGKTTIGQSLANKLKMSHLD---------------LDTALIEKIGRSIPDYFEKYGEAA 55 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 R E + L + +L G L+ Sbjct: 56 FREQ--ETQLLKELSKNTAVLST----------GGGIVVGPENRSLLKSFQQ-------V 96 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I L + LKR++ + ++ ++ + + E R+ + + A+ +D+ Sbjct: 97 IYLHATPEELLKRIKEDTENQRPLAIERSSKEIIALFESRKNFYEECAKM------TIDT 150 Query: 194 A-HSFQSVATNILNIVWE 210 + + IL + E Sbjct: 151 TNRLPEEIINEILQQLKE 168 >gi|187922748|ref|YP_001894390.1| deoxynucleoside kinase [Burkholderia phytofirmans PsJN] gi|187713942|gb|ACD15166.1| putative deoxynucleoside kinase [Burkholderia phytofirmans PsJN] Length = 226 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G GKT+ L + + + P P E + Sbjct: 19 YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLERFYR-----DTARYALP 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + FA R ++V A G L+ D F+ + +A ++ L+ Sbjct: 70 TQLH-FALQRAQQAQDV-SAAHASGTPLVAD-FMTQKNDIFARLTLQEDEWQLYRALAAR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 I V PD + L ++ R+Q R E D + Sbjct: 127 IDVNAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166 >gi|10566934|dbj|BAB16044.1| similar to Lactobacillus acidophilus dA/dG-kinase [Streptococcus equi subsp. zooepidemicus] Length = 205 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 51/225 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK++ + L L +V P + + A + Sbjct: 2 GAGKSSLAAALGEHL---GTEVFY-EAVDNNPVLDLYYQ----------DPKKYAFLLQI 47 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDS-----SYAYQGERDSSQHLFL------DSLQE 122 L+ I+ A +L DR + + Y+ + L + + L+E Sbjct: 48 FFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLTLNYKNGNVTKTELEIYQELLANMLEE 106 Query: 123 IS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-----MIHEKRRQI 176 + + + PD I +D+ + L+R++ R FE+ D + + Sbjct: 107 LEGMPKKRPDLLIYIDVSFEKMLERIEKRGR--------RFEQVDDNPDLEAYYHQVHGE 158 Query: 177 F---LDIARNQPDRCHIVDSA-----HSFQSVATNILNIVWELVQ 213 + + P +D + + +AT +L ++ E ++ Sbjct: 159 YPTWYERYDVSPK--MRIDGNKLDFVQNPEDLAT-VLQMIDEKLK 200 >gi|256810084|ref|YP_003127453.1| Adenylate kinase [Methanocaldococcus fervens AG86] gi|256793284|gb|ACV23953.1| Adenylate kinase [Methanocaldococcus fervens AG86] Length = 177 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 68/211 (32%), Gaps = 56/211 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GKTT +L V E +H L + +E + Sbjct: 3 IAITGTPGVGKTTVSKVLGNKF---GIKVIDITE-------AVKKHKLYTEKDEEMDSYV 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + +EN I+ + K+++ D + Sbjct: 53 IDF-------EKLENFIKEIEEKEKVIILDGHV-------------------------SH 80 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-P 185 + PD TI+L +I +R++ R + + E + LD+ + Sbjct: 81 LLNPDYTIVLRCNPEIIKERLEKRGYKPKK------------VLENIQAEILDVCLCESK 128 Query: 186 DRCHIVDSA-HSFQSVATNILNIVWELVQKR 215 + + +D+ + + + I+ + +++ Sbjct: 129 GKIYEIDTTGRDVEDIVSEIIEAIKNKKERK 159 >gi|159896875|ref|YP_001543122.1| deoxynucleoside kinase-like [Herpetosiphon aurantiacus ATCC 23779] gi|159889914|gb|ABX02994.1| Deoxynucleoside kinase-like [Herpetosiphon aurantiacus ATCC 23779] Length = 203 Score = 48.9 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 57/161 (35%), Gaps = 14/161 (8%) Query: 4 GLFISFEGIEGAGKTTHISLL---KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 G I+ G G GKTT LL +RF V P A+ + L+ D Sbjct: 2 GKLITIVGNAGIGKTTLTKLLCRDQRFFAALESHV---ERPFQQLFAQNLQRYALANQFD 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE F R V L E + F +QG +++ L Sbjct: 59 YLLLRAEQERFI--RAQSGIGVQDGGLDEDFWVFTQHFQ-----HQGYLSAAEFELCQRL 111 Query: 121 Q-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E+ PD I LD P+D+ ++R + R E A D Sbjct: 112 YTELRAGLGQPDLIIKLDAPLDVIIQRYEQRNRPLEIAQRD 152 >gi|116310888|emb|CAH67828.1| B0616E02-H0507E05.4 [Oryza sativa Indica Group] Length = 243 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 48/218 (22%) Query: 6 FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 FI+F G G+GK T + L D+ + G+ E +++ + Sbjct: 60 FIAFVLGGPGSGKGTQCVRIASDFGFAHLSAG--DLLRSEISTGSEKGELILNIIKEGKI 117 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +IR A+ + K +L D F R + Sbjct: 118 VP--------------SEITVELIRKAMESSDAKRVLIDGF---------PRCEENRIAF 154 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173 + + PD I D P D +KR+ R R ++ +K + + E Sbjct: 155 ERIT-----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 208 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + H +++ + + + + + L Sbjct: 209 VDYYTSR-----GKVHKINATGTEEEIFGAVHKLFSSL 241 >gi|218295702|ref|ZP_03496498.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23] gi|218243861|gb|EED10388.1| deoxynucleoside kinase [Thermus aquaticus Y51MC23] Length = 202 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 76/223 (34%), Gaps = 30/223 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63 ++I+ G G+GK+T +LL G P EA L + Sbjct: 1 MYIAIAGNIGSGKSTLTALLAEAF-------------GLKPVYEAVSENPYLEDFYRDMA 47 Query: 64 AEAEA--IVFAAAR-LDHVENVI-RPALMEGKILLCDRFLDS-SYAYQGERDSSQHL-FL 117 + A + F A R H+ V P +++ + + D F+ + + +G ++ Sbjct: 48 SYAFHSQVFFLARRVRQHLLEVNGNPRVVQDRTVYEDAFVFAKNLHREGFLSRRDWETYM 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D Q +S PD I L + R+ R E D ++ Sbjct: 108 DLFQSVSSALRKPDLLIYLRASLPTLKARIAKRGRPFERQIPD-------SYLLSLNALY 160 Query: 178 LDIARNQP-DRCHIVDSAHSFQSVATNI-LNIVWELVQKRVSP 218 D+ + +V++ V + E +++R+ P Sbjct: 161 EDLMASWDLSPVEVVEADR-LDFVEREEDRMALLEALKRRLGP 202 >gi|125559227|gb|EAZ04763.1| hypothetical protein OsI_26926 [Oryza sativa Indica Group] Length = 261 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 62/207 (29%), Gaps = 45/207 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 31 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFL----DSSYAYQGERDSSQHLFLDSLQEISVQ 126 +I + EGKI+ + + D+ + ++ + + + Sbjct: 71 ----------TMIENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFE 120 Query: 127 E---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180 + P + D + +R+ R R ++ ++ + E + + Sbjct: 121 NVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHY--- 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 N D+ +D+A V ++ I Sbjct: 178 --NAKDKVKKIDAAKPISEVFEDVKAI 202 >gi|52142943|ref|YP_083886.1| hypothetical protein BCZK2297 [Bacillus cereus E33L] gi|51976412|gb|AAU17962.1| conserved hypothetical protein; possible uridine kinase [Bacillus cereus E33L] Length = 186 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 35/212 (16%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLINS-------------------KALYFDSYH 41 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+ + ++ E V+ P + + + L+ D S+ Y Sbjct: 42 FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IIVDYPFAY 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L Q + D TI +D P+DI + R R E+ + + K + + R+ +L+ Sbjct: 92 LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEIHNDLKHYITYA--RKGYLE 147 Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D + S + I ++ Sbjct: 148 ALHTVKPNSDIVLDGSLSVDEIINQIEEELYR 179 >gi|84516269|ref|ZP_01003629.1| glycosyltransferase, group 1 [Loktanella vestfoldensis SKA53] gi|84509965|gb|EAQ06422.1| glycosyltransferase, group 1 [Loktanella vestfoldensis SKA53] Length = 632 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 64/219 (29%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------ 54 MN + G +G+GKTT L LQ + + R L Sbjct: 1 MNR--LVCIIGTDGSGKTTLSDALVERLQGRGERARRVWLGSESYLMAPVRAALKLVWDR 58 Query: 55 -------------LSCGVDEFGAEAEAIVFAAARL---------------DHVENVIRPA 86 L+ ++ AE AAR + R Sbjct: 59 RRGKGKSHGPKPGLASQRVDYAAEIAQKNALAARHPFAVRVYLAMVWFDYWLQLWIKRLG 118 Query: 87 LMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK 145 L + ++ DR+L G S + Q + +P+ + L + ++ + Sbjct: 119 LRDAGTIVADRYLFDVAVNVGLALGWSPEEVVRYAQTQICRIPLPEVRVFLRVEPEVSMA 178 Query: 146 RVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIARN 183 R + + + L Y++ R L IA N Sbjct: 179 RKDDVFDIHYVRMRLHYYDAIAEAFGFTVRDGTLPIAEN 217 >gi|220918910|ref|YP_002494214.1| deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-1] gi|219956764|gb|ACL67148.1| deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-1] Length = 215 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 52/173 (30%), Gaps = 41/173 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +I+ EG G GKTT +L L + V E P A Sbjct: 1 MERPRYIAVEGPIGVGKTTLAQVLAERLGAR----LVLEEAESNPFLPA----------- 45 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYA-YQGERDSS-- 112 F A R H L+ + D F S+ A Y +D Sbjct: 46 ----------FYADRKKHAFQAQVFFLLSRFQQQQVLFQQDLFSSSTVADYLFAKDRIFA 95 Query: 113 -------QHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + + E + + V PD I L D+ L R++ R E Sbjct: 96 TLTLEPAELALYRQIHELLGPRVVRPDLVIYLQARTDVLLSRIRKRGRDFERG 148 >gi|315230267|ref|YP_004070703.1| FtsY-like signal recognition particle receptor protein subunit alpha [Thermococcus barophilus MP] gi|315183295|gb|ADT83480.1| FtsY-like signal recognition particle receptor protein, alpha subunit [Thermococcus barophilus MP] Length = 300 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G+GKTT I+ L +L++ + T A A V G + Sbjct: 107 IVFVGFNGSGKTTTIAKLAHWLKKHGLSSVIAA--SDTFRAGAIEQV--EEHARRVGVKV 162 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R+ +D +++I Sbjct: 163 IKHRYGADPAAVAYDAIQHAKARGVDVVLVD---------TAGRNELNRNLMDEMKKIV- 212 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 213 RVTKPDLVIF 222 >gi|320335404|ref|YP_004172115.1| deoxynucleoside kinase [Deinococcus maricopensis DSM 21211] gi|319756693|gb|ADV68450.1| deoxynucleoside kinase [Deinococcus maricopensis DSM 21211] Length = 203 Score = 48.9 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 21/159 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKT+ L + V P E Sbjct: 1 MYVVVEGPIGVGKTSLSRRLAARYGARLNLEIVEENPFLARFYEQ--------------P 46 Query: 65 EAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--D 118 +A A F +R + + + L + ++ D D + + L D Sbjct: 47 DAYAFQVQVFFLLSRFKQLAGIAQGELFA-EDVVSDYLFDKDFIFAAMNLRDDEFALYQD 105 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + + PD + L D+ L R+ R E+ Sbjct: 106 LYTHLRPRLPQPDLVVYLRADTDVLLSRIAMRGRPFEAD 144 >gi|257871003|ref|ZP_05650656.1| deoxynucleoside kinase [Enterococcus gallinarum EG2] gi|257805167|gb|EEV33989.1| deoxynucleoside kinase [Enterococcus gallinarum EG2] Length = 214 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 73/237 (30%), Gaps = 58/237 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ +LL L ++A + V Sbjct: 4 IVLAGTIGAGKSSLTALLADHL-----------------GSQAFYESIDDNEVLPLFYAD 46 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112 A + L+ + I+ AL + +L DR + DS A E Sbjct: 47 PNKYAFLLQIYFLNKRFDSIKKALNDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVRVY 105 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + L+E+ + + PD + + + + L+R+ R E + + Sbjct: 106 DDLLANMLEELPYAAHKKHPDLLVHIRVSFETMLERINKRGR----------EYEQLSFD 155 Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH-----SFQSVATNILNIVWELVQK 214 + ++ +D ++ A +L +V E + K Sbjct: 156 PTLYDYYQELNLRYDQWYEEYQESPKIQIDGDQFNFVEDPEA-AQKVLAMVDEALAK 211 >gi|197124130|ref|YP_002136081.1| deoxynucleoside kinase [Anaeromyxobacter sp. K] gi|196173979|gb|ACG74952.1| deoxynucleoside kinase [Anaeromyxobacter sp. K] Length = 215 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 52/173 (30%), Gaps = 41/173 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +I+ EG G GKTT +L L + V E P A Sbjct: 1 MERPRYIAVEGPIGVGKTTLAQVLAERLGAR----LVLEEAESNPFLPA----------- 45 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYA-YQGERDSS-- 112 F A R H L+ + D F S+ A Y +D Sbjct: 46 ----------FYADRKKHAFQAQVFFLLSRFQQQQVLFQQDLFSSSTVADYLFAKDRIFA 95 Query: 113 -------QHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + + E + + V PD I L D+ L R++ R E Sbjct: 96 TLTLEPAELALYRQIHELLGPRVVRPDLVIYLQARTDVLLSRIKKRGRDFERG 148 >gi|56692704|ref|YP_164162.1| deoxynucleoside kinase [Singapore grouper iridovirus] gi|42517416|gb|AAS18082.1| deoxynucleoside kinase [Singapore grouper iridovirus] Length = 191 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 50/224 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M IS G GAGK++ ++ L ++ Y + T L Sbjct: 1 MALPFLISVSGNIGAGKSSLLAALA----KRGY---YVQPEDFTKWGPLFNLALAEPKRY 53 Query: 61 EFGAEAEAIVFAAA-RLDHVENVIRPALMEGKILLCDRFLDSSY-----AY-QGERDSSQ 113 +F ++ + ++ + +H N RP +++ +R D AY G + Sbjct: 54 KFSSQLKILMVQMDLQREH-RNGTRP------LVILERASDCVLGFGKVAYDMGLMHVEE 106 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L+ + + + D I+LD P D+ R+ NR D + Sbjct: 107 YRMLEDIH--AKLDAKVDLKILLDTPPDVCRVRIGNR---------DR------EFEQAI 149 Query: 174 RQIFLDIARNQPDRCHIVDSAH-------SFQSVATNILNIVWE 210 +L Q +D+A + V N + ++ + Sbjct: 150 SNEYLTALHAQ-----FIDAADVKLSGLPPKEEVVENFIKLLAQ 188 >gi|154497977|ref|ZP_02036355.1| hypothetical protein BACCAP_01957 [Bacteroides capillosus ATCC 29799] gi|150272967|gb|EDN00124.1| hypothetical protein BACCAP_01957 [Bacteroides capillosus ATCC 29799] Length = 203 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 67/213 (31%), Gaps = 42/213 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G I G G GK+T I+ L + + V TR P A + + + Sbjct: 7 TRGQLIVLSGPSGVGKSTVIAELLGERKDIYFSVSFTTRNPRVGEADGVNYNFVSREEFE 66 Query: 61 EFGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A E + +A ++ VI+ L G +L D QG Sbjct: 67 RMIAADELLEYAQYVGNYYGTSLKVIQDKLAAGIDVLLD------IEVQGAAK------- 113 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 V+ P+ +I +P + +R+ R + E +K R+ Sbjct: 114 -------VRSKCPEAVLIFIIPPSFEELSRRLHGRATDNEDVIAGRL--------QKARE 158 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + I +V+ V+T I+ Sbjct: 159 EYQQIPNYD---YLVVN-----DKVSTAAEEII 183 >gi|323467488|gb|ADX71175.1| Deoxyadenosine kinase [Lactobacillus helveticus H10] Length = 215 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + L+H I A+ + + DR + D+ + A D ++ D L Sbjct: 53 --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E +++ PD I + + +D L R++ R E D Sbjct: 110 LENMIEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 155 >gi|254482523|ref|ZP_05095762.1| Deoxynucleoside kinase subfamily protein [marine gamma proteobacterium HTCC2148] gi|214037214|gb|EEB77882.1| Deoxynucleoside kinase subfamily protein [marine gamma proteobacterium HTCC2148] Length = 199 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 16/153 (10%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75 GKTT L + + E P E + A A + F R Sbjct: 2 GKTTLTKRLATTFNYQ----TLLEEAEQNPFLEKFYR------NRQQAALATQLFFLFQR 51 Query: 76 LDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 ++++ + + E + + D FL D +A L+ +++++ PD Sbjct: 52 AQKIQDLRQADIFEP-VRVAD-FLIEKDPLFARINLDREEFQLYQKVYEQLTIDAPKPDL 109 Query: 133 TIILDLPVDIGLKRVQNRYSLRESA-CLDYFER 164 I L D+ L R+ +R E DY ER Sbjct: 110 VIYLQASTDVLLSRINSRGIAVEQGIERDYLER 142 >gi|6683813|gb|AAF23372.1|AF187063_1 UMP/CMP kinase b [Oryza sativa Japonica Group] Length = 210 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 63/207 (30%), Gaps = 45/207 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 31 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFL----DSSYAYQGERDSSQHLFLDSLQEISVQ 126 +I + EGKI+ + + D+ + ++ + + + Sbjct: 71 ----------TMIENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFE 120 Query: 127 E---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180 + P + D + +R+ R R ++ ++ + E + + Sbjct: 121 NVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHY--- 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 N ++ +D+A S V ++ I Sbjct: 178 --NAKNKVKKIDAAKSISEVFEDVKAI 202 >gi|257387782|ref|YP_003177555.1| cytidylate kinase [Halomicrobium mukohataei DSM 12286] gi|257170089|gb|ACV47848.1| cytidylate kinase [Halomicrobium mukohataei DSM 12286] Length = 192 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 38/171 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G+GK+T + L L YD + R + Sbjct: 1 MLITVSGPAGSGKSTLAANLAEKL---GYDHV--------SGGDIFRSL----------- 38 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A R + + + A + +I DR LD R+ + L Sbjct: 39 -------AEERGVSLVELNQQAESDDQI---DRDLDRRL-RSTAREEDDLVLESRLAGWM 87 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHE 171 + D + LD P+D+ +R+ +R + D E + + E Sbjct: 88 AGDHA-DLKLWLDAPLDVRAERIADREEKSVTEARDETQARAESEGLRYQE 137 >gi|222637488|gb|EEE67620.1| hypothetical protein OsJ_25184 [Oryza sativa Japonica Group] Length = 222 Score = 48.5 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 61/211 (28%), Gaps = 53/211 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 31 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70 Query: 71 FAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +I + EGKI+ L D + + ++ + Sbjct: 71 ----------TMIENMIKEGKIVPSEVTIKLLQD----AMIKNENDKFLIDGFPRNEENR 116 Query: 123 ISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQI 176 + + + P + D + +R+ R R ++ ++ + E + Sbjct: 117 AAFENVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEH 176 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + N ++ +D+A V ++ I Sbjct: 177 Y-----NAKNKVKKIDAAKPISEVFEDVKAI 202 >gi|322410956|gb|EFY01864.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 213 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 74/232 (31%), Gaps = 39/232 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L +V P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGNHL---GTEVFY-EAVDNNPVLDLYYQ----------NP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121 + A + L+ I+ A +L DR + + + ++ L+ Sbjct: 47 KKYAFLLQIFFLNKRFKSIKEAYQSDNNIL-DRSIFEDELFLKLNYKNGNVTKTELEIYQ 105 Query: 122 ---------EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 + + PD I +D+ + L+R++NR E + E+ + Sbjct: 106 ELLENMLEELEGMPKKRPDLLIYIDVSFEKMLERIENRGRSFEQVRNNPELEQ----YYH 161 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 + + + + P +D S V + L V ++V ++ L Sbjct: 162 QVHEEYPTWYEDYKVSPK--MKIDGN-SLDFVKNPDDLATVLQMVDDKLKEL 210 >gi|146345494|sp|Q58933|PSTK_METJA RecName: Full=L-seryl-tRNA(Sec) kinase; AltName: Full=O-phosphoseryl-tRNA(Sec) kinase; Short=PSTK Length = 248 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 68/211 (32%), Gaps = 51/211 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61 + I G+ G GK+T L + L + N DV V ++ R V + Sbjct: 1 MLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEF 53 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ +A ++ ++ D D++Y Y R ++ + Sbjct: 54 IKKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSMRRDLINIAKKYNK 95 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ I L +D+ ++R R E+ + +K + F + Sbjct: 96 NYAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKMYEKFDEPG 136 Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210 + + I+D+ I + E Sbjct: 137 KKYKWDEPFLIIDTTKDID--FNEIAKKLIE 165 >gi|15669733|ref|NP_248546.1| chromatin associated protein KTI12 [Methanocaldococcus jannaschii DSM 2661] gi|1592169|gb|AAB99557.1| Yeast KTI12 Protein [Methanocaldococcus jannaschii DSM 2661] Length = 252 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 68/211 (32%), Gaps = 51/211 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61 + I G+ G GK+T L + L + N DV V ++ R V + Sbjct: 5 MLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEF 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ +A ++ ++ D D++Y Y R ++ + Sbjct: 58 IKKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSMRRDLINIAKKYNK 99 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ I L +D+ ++R R E+ + +K + F + Sbjct: 100 NYAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKMYEKFDEPG 140 Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210 + + I+D+ I + E Sbjct: 141 KKYKWDEPFLIIDTTKDID--FNEIAKKLIE 169 >gi|310821027|ref|YP_003953385.1| deoxynucleoside kinase family protein [Stigmatella aurantiaca DW4/3-1] gi|309394099|gb|ADO71558.1| Deoxynucleoside kinase family protein [Stigmatella aurantiaca DW4/3-1] Length = 204 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 59/187 (31%), Gaps = 29/187 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ G GAGKT S L R YD+ EP L+ Sbjct: 1 MARKKFIAVAGNIGAGKTELTSFLCRK-----YDLTPYFEPNDQNP-------YLAPFYK 48 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQ 113 + + A L H + R +L DR + D+ + Q D Sbjct: 49 DM--KTWAFRSQIFFLTHKFRLHRELERHSGTVLQDRTIYEDAEIFAKNLHRQRFIDRRD 106 Query: 114 HLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L E Q + PD I L PV +R++ R E V ++ Sbjct: 107 WQTYRELYETIAQALSPPDLMIYLRCPVQTLRERIRLRGRSMEKDIP-------VAYLKR 159 Query: 173 RRQIFLD 179 ++ + Sbjct: 160 LNALYEE 166 >gi|301774204|ref|XP_002922516.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like isoform 2 [Ailuropoda melanoleuca] Length = 343 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 53/252 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58 I+ +G +GK + L K++ T A + S Sbjct: 46 KVITVDGNICSGKGKLAKEIAEKLGLKHFPEAGVHYADSTTGDGRALDLEFSGSCSVEKF 105 Query: 59 ------VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106 D ++ ++ A+RL + + L G+ ++ +R + S + + Q Sbjct: 106 YDDPRSNDGHSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMYSQ 164 Query: 107 GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 G + +++++++E + P + +D+PV R+Q + + E Sbjct: 165 GFIRKQCVDHYNEVKKVTIREYLPPHVVVYIDVPVPEIQSRIQKKGNPHE---------- 214 Query: 166 DVMIHEKRRQIFLDIARNQ---------PDRCHIV--DS--AHSFQSVATNILNIVWELV 212 K +L N ++C ++ ++ A + V +I E + Sbjct: 215 -----MKITSGYLQDIENSYKKNFLPEMSEKCEVLQYNAREAQDAEKVVEDI-----EYL 264 Query: 213 QKRVSPLSSKKD 224 + P + D Sbjct: 265 KYNKGPWLEQSD 276 >gi|222628242|gb|EEE60374.1| hypothetical protein OsJ_13512 [Oryza sativa Japonica Group] Length = 281 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 48/213 (22%) Query: 6 FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 FI+F G G+GK T + L D+ + G+ E +++ + Sbjct: 60 FIAFVLGGPGSGKGTQCVRIASDFGFAHLSAG--DLLRSEISTGSEKGELILNIIKEGKI 117 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +IR A+ + K +L D F R + Sbjct: 118 VP--------------SEITVELIRKAMESSDAKRVLIDGF---------PRCEENRIAF 154 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173 + + PD I D P D +KR+ R R ++ +K + + E Sbjct: 155 ERIT-----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 208 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + + H +++ + + + + Sbjct: 209 VDYYTSR-----GKVHKINATGTEEEIFGAVHK 236 >gi|300811212|ref|ZP_07091719.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497799|gb|EFK32814.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|325685064|gb|EGD27199.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 232 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 49/231 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ ++L ++L G P E+ +L + Sbjct: 4 IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 + +F H I+ AL + +L DR + DS + + G + + D Sbjct: 51 TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYD 106 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 L E ++E+ PD + +++ + ++R+Q R E D E ++ Sbjct: 107 ELLESMMKELERMPKRHPDLLVHINVSYETMIRRIQKRGRSYEQLSFDPTLE----DYYK 162 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + + + + P ++D H V I + ++ Sbjct: 163 RMLRYYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211 >gi|260665191|ref|ZP_05866040.1| deoxynucleoside kinase [Lactobacillus jensenii SJ-7A-US] gi|260560928|gb|EEX26903.1| deoxynucleoside kinase [Lactobacillus jensenii SJ-7A-US] Length = 224 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 51/218 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I G GAGK++ S+L ++L G P E+ + +L + Sbjct: 5 IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 51 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 A + +F H I+ AL + +L DR + DS + + G + D Sbjct: 52 AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 107 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166 L + ++E+ PD + +D+ + +KR+Q R RE LDY E ++ Sbjct: 108 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 165 Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVD 192 + +E + + LD ++ DR ++D Sbjct: 166 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDRQEVLD 203 >gi|161508200|ref|YP_001578171.1| deoxyadenosine kinase [Lactobacillus helveticus DPC 4571] gi|160349189|gb|ABX27863.1| Deoxyadenosine kinase [Lactobacillus helveticus DPC 4571] Length = 225 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 15 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + L+H I A+ + + DR + D+ + A D ++ D L Sbjct: 63 --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 119 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E +++ PD I + + +D L R++ R E D Sbjct: 120 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 165 >gi|322511332|gb|ADX06641.1| hypothetical protein 162281036 [Organic Lake phycodnavirus] Length = 217 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 80/215 (37%), Gaps = 24/215 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDE 61 IS EG G+GK+T + LK+ L +N + EP + E +L + Sbjct: 13 KIISIEGNIGSGKSTFLDFLKKSL--QNPRICFLDEPIQEWNSVVDEHGVTILEKFYESK 70 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD- 118 A + ++ +RL + I+ + I++ +R D + Q DS ++ Sbjct: 71 SYAFSFQMMAYISRLSMLTKAIKS--KKYDIIITERGLGTDKNVFCQMLYDSKSICKIEY 128 Query: 119 --SLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + ++ + L D+ KR+ R ES + K HEK Sbjct: 129 TIYNKWFDEFKIKEHIHYVYLKTTPDVSHKRIMIRNRKGESNMAMSYVNKCHDYHEK--- 185 Query: 176 IFLDIARNQPDRCHIVDSA--HSFQSVATNILNIV 208 +++ + C ++D+ + + + + V Sbjct: 186 ---WLSKVE---CLVLDANPENDPKELHLKLKEFV 214 >gi|139472981|ref|YP_001127696.1| putative deoxyadenosine kinase protein [Streptococcus pyogenes str. Manfredo] gi|134271227|emb|CAM29443.1| putative deoxyadenosine kinase protein [Streptococcus pyogenes str. Manfredo] Length = 213 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 47 KKYAFLLQIYFLNKRFKSIKEAYRADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211 + + + P +D +V I + EL Sbjct: 162 QVHSEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210 >gi|73542464|ref|YP_296984.1| deoxynucleoside kinase [Ralstonia eutropha JMP134] gi|72119877|gb|AAZ62140.1| Deoxynucleoside kinase [Ralstonia eutropha JMP134] Length = 214 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 63/200 (31%), Gaps = 36/200 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G+GKT+ L L H P G + + Sbjct: 8 IVVEGPVGSGKTSLAQRLAHTL-------HAAELPDGVRSNPFLERFYRDRARYALPLQL 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQHLFLDSL 120 + A +L + AL G+ ++ DR S + L Sbjct: 61 ACLNKRADQLQQ----WQNALFAGQRMVSNFLIAKDRLYASL--------NLPEDELALY 108 Query: 121 QEISVQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 I+ + +P D I+L + +R+ R E+A +D ++ Sbjct: 109 DAIASRLQLPPQRTDLVIMLQATPSLLRERIARRGEPGEAAGID------EAYLQQLTDA 162 Query: 177 FLDIARNQPD-RCHIVDSAH 195 + ++ + IVD+AH Sbjct: 163 YGELFHRYDEAPVLIVDTAH 182 >gi|115473457|ref|NP_001060327.1| Os07g0624700 [Oryza sativa Japonica Group] gi|6683811|gb|AAF23371.1|AF187062_1 UMP/CMP kinase a [Oryza sativa Japonica Group] gi|33146624|dbj|BAC79912.1| UMP/CMP kinase a [Oryza sativa Japonica Group] gi|113611863|dbj|BAF22241.1| Os07g0624700 [Oryza sativa Japonica Group] Length = 210 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 25/207 (12%), Positives = 62/207 (29%), Gaps = 45/207 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 31 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 70 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFL----DSSYAYQGERDSSQHLFLDSLQEISVQ 126 +I + EGKI+ + + D+ + ++ + + + Sbjct: 71 ----------TMIENMIKEGKIVPSEVTIKLLQDAMIKNENDKFLIDGFPRNEENRAAFE 120 Query: 127 E---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180 + P + D + +R+ R R ++ ++ + E + + Sbjct: 121 NVTKISPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEHY--- 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 N ++ +D+A V ++ I Sbjct: 178 --NAKNKVKKIDAAKPISEVFEDVKAI 202 >gi|301774202|ref|XP_002922515.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like isoform 1 [Ailuropoda melanoleuca] Length = 362 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 53/252 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG------ 58 I+ +G +GK + L K++ T A + S Sbjct: 65 KVITVDGNICSGKGKLAKEIAEKLGLKHFPEAGVHYADSTTGDGRALDLEFSGSCSVEKF 124 Query: 59 ------VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------Q 106 D ++ ++ A+RL + + L G+ ++ +R + S + + Q Sbjct: 125 YDDPRSNDGHSYRLQSWLY-ASRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMYSQ 183 Query: 107 GERDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 G + +++++++E + P + +D+PV R+Q + + E Sbjct: 184 GFIRKQCVDHYNEVKKVTIREYLPPHVVVYIDVPVPEIQSRIQKKGNPHE---------- 233 Query: 166 DVMIHEKRRQIFLDIARNQ---------PDRCHIV--DS--AHSFQSVATNILNIVWELV 212 K +L N ++C ++ ++ A + V +I E + Sbjct: 234 -----MKITSGYLQDIENSYKKNFLPEMSEKCEVLQYNAREAQDAEKVVEDI-----EYL 283 Query: 213 QKRVSPLSSKKD 224 + P + D Sbjct: 284 KYNKGPWLEQSD 295 >gi|238855472|ref|ZP_04645782.1| deoxyguanosIne kinase [Lactobacillus jensenii 269-3] gi|282932160|ref|ZP_06337610.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1] gi|313472751|ref|ZP_07813239.1| deoxyguanosine kinase [Lactobacillus jensenii 1153] gi|238831962|gb|EEQ24289.1| deoxyguanosIne kinase [Lactobacillus jensenii 269-3] gi|281303700|gb|EFA95852.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1] gi|313448861|gb|EEQ68275.2| deoxyguanosine kinase [Lactobacillus jensenii 1153] Length = 223 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 51/218 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I G GAGK++ S+L ++L G P E+ + +L + Sbjct: 4 IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 50 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 A + +F H I+ AL + +L DR + DS + + G + D Sbjct: 51 AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 106 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166 L + ++E+ PD + +D+ + +KR+Q R RE LDY E ++ Sbjct: 107 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 164 Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVD 192 + +E + + LD ++ DR ++D Sbjct: 165 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDRQEVLD 202 >gi|218194202|gb|EEC76629.1| hypothetical protein OsI_14565 [Oryza sativa Indica Group] Length = 282 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 48/213 (22%) Query: 6 FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 FI+F G G+GK T + L D+ + G+ E +++ + Sbjct: 61 FIAFVLGGPGSGKGTQCVRIASDFGFAHLSAG--DLLRSEISTGSEKGELILNIIKEGKI 118 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +IR A+ + K +L D F R + Sbjct: 119 VP--------------SEITVELIRKAMESSDAKRVLIDGF---------PRCEENRIAF 155 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173 + + PD I D P D +KR+ R R ++ +K + + E Sbjct: 156 ERIT-----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 209 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + + H +++ + + + + Sbjct: 210 VDYYTSR-----GKVHKINATGTEEEIFGAVHK 237 >gi|19745297|ref|NP_606433.1| hypothetical protein spyM18_0121 [Streptococcus pyogenes MGAS8232] gi|21909630|ref|NP_663898.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I)subunit [Streptococcus pyogenes MGAS315] gi|28895008|ref|NP_801358.1| hypothetical protein SPs0096 [Streptococcus pyogenes SSI-1] gi|56807746|ref|ZP_00365609.1| COG1428: Deoxynucleoside kinases [Streptococcus pyogenes M49 591] gi|209558682|ref|YP_002285154.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Streptococcus pyogenes NZ131] gi|306828201|ref|ZP_07461462.1| deoxynucleoside kinase [Streptococcus pyogenes ATCC 10782] gi|19747396|gb|AAL96932.1| hypothetical protein spyM18_0121 [Streptococcus pyogenes MGAS8232] gi|21903812|gb|AAM78701.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I)subunit [Streptococcus pyogenes MGAS315] gi|28810253|dbj|BAC63191.1| hypothetical protein [Streptococcus pyogenes SSI-1] gi|209539883|gb|ACI60459.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Streptococcus pyogenes NZ131] gi|304429579|gb|EFM32627.1| deoxynucleoside kinase [Streptococcus pyogenes ATCC 10782] Length = 213 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 47 KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211 + + + P +D +V I + EL Sbjct: 162 QVHGEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210 >gi|256851658|ref|ZP_05557046.1| deoxynucleoside kinase [Lactobacillus jensenii 27-2-CHN] gi|260661625|ref|ZP_05862537.1| deoxynucleoside kinase [Lactobacillus jensenii 115-3-CHN] gi|256615616|gb|EEU20805.1| deoxynucleoside kinase [Lactobacillus jensenii 27-2-CHN] gi|260547682|gb|EEX23660.1| deoxynucleoside kinase [Lactobacillus jensenii 115-3-CHN] Length = 224 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 89/237 (37%), Gaps = 61/237 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I G GAGK++ S+L ++L G P E+ + +L + Sbjct: 5 IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 51 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 A + +F H I+ AL + +L DR + DS + + G + D Sbjct: 52 AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 107 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166 L + ++E+ PD + +D+ + +KR+Q R RE LDY E ++ Sbjct: 108 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 165 Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +E + + LD ++ DR Q V I+ + E+ Sbjct: 166 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDR----------QEVLDTIIAKLKEM 212 >gi|225717844|gb|ACO14768.1| UMP-CMP kinase [Caligus clemensi] Length = 194 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 38/211 (18%) Query: 11 GIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G GAGK T + + + R+ G+ E H +++ + Sbjct: 11 GGPGAGKGTQCAKIVAKYGFVHLSAGDLLRAERQKEGSEYGELIEHHIVNGTIVPP---- 66 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 A ++N I + RFL + S+ + S+ + Sbjct: 67 ------AITCALLKNAILSSSS------SKRFLIDGF---PRNQSNVDEWEKSVSPLVQF 111 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-----IA 181 + + + D +I ++R NR + D E +KR +++ I Sbjct: 112 KFL----LFFDCSEEICVQRCLNRGAAGSGRSDDNLES-----LKKRIATYMNSTLGVIQ 162 Query: 182 RNQPDR-CHIVDSAHSFQSVATNILNIVWEL 211 + D VD++ S V ++ I E+ Sbjct: 163 SYEKDNGVRRVDASRSVDEVFADVQKIFDEV 193 >gi|270014683|gb|EFA11131.1| hypothetical protein TcasGA2_TC004732 [Tribolium castaneum] Length = 198 Score = 48.5 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 66/226 (29%), Gaps = 49/226 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G GAGK T + Y VH+ A + R Sbjct: 1 MAKPKVIFVLGAPGAGKGTQCQKIVDNF---GY-VHL-------SAGDLLREERAKPDSK 49 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117 +I + EGKI+ + S ++ + + Sbjct: 50 ------------------YGELIETYIREGKIVPVEI----TCSLLENAMKKSGKEKFLI 87 Query: 118 DSL--QEISVQE---VMPD-----CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 D + ++ + D + D P ++ + R R + D + + Sbjct: 88 DGFPRNQNNLDGWNKTLADNVKLLFVLFFDCPKEVCVDRCLGRGAAGSGRSDDNMQSLEK 147 Query: 168 MIHEKRRQIFLDIARNQPDRCHI--VDSAHSFQSVATNILNIVWEL 211 + ++ I + +R + +D+ + + V + + E+ Sbjct: 148 RFNTFTQET-QPIVKYYEERGLVRNIDATKAPEDVFGRVKEVFTEV 192 >gi|261824790|pdb|3A4L|A Chain A, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec) Kinase gi|261824791|pdb|3A4L|B Chain B, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec) Kinase gi|261824792|pdb|3A4M|A Chain A, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec) Kinase gi|261824793|pdb|3A4M|B Chain B, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec) Kinase gi|261824794|pdb|3A4N|A Chain A, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec) Kinase gi|261824795|pdb|3A4N|B Chain B, Crystal Structure Of Archaeal O-Phosphoseryl-Trna(Sec) Kinase gi|315583415|pdb|3AM1|A Chain A, Crystal Structure Of Protein Length = 260 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 68/211 (32%), Gaps = 51/211 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61 + I G+ G GK+T L + L + N DV V ++ R V + Sbjct: 5 MLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEF 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ +A ++ ++ D D++Y Y R ++ + Sbjct: 58 IKKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSMRRDLINIAKKYNK 99 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ I L +D+ ++R R E+ + +K + F + Sbjct: 100 NYAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKMYEKFDEPG 140 Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIVWE 210 + + I+D+ I + E Sbjct: 141 KKYKWDEPFLIIDTTKDID--FNEIAKKLIE 169 >gi|14591436|ref|NP_143516.1| signal recognition particle protein [Pyrococcus horikoshii OT3] gi|3258098|dbj|BAA30781.1| 326aa long hypothetical signal recognition particle protein [Pyrococcus horikoshii OT3] Length = 326 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G+GKTT I+ L +L++ + V + T A A L + G + Sbjct: 130 ILFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQ--LEEHAKKVGVKV 185 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R + +D +++I+ Sbjct: 186 IKHKYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKIA- 235 Query: 126 QEVMPDCTII 135 + P+ I Sbjct: 236 RVTKPNLVIF 245 >gi|322787338|gb|EFZ13450.1| hypothetical protein SINV_04831 [Solenopsis invicta] Length = 221 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 31/206 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGKTT + L + ++RE LL V + Sbjct: 36 GGPGAGKTTQCTRLAEHY---GFCTIISRE-------------LLRNEVTTGSQRGVILA 79 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + + V + L++ K+ L+S +G S Q + Q P Sbjct: 80 YLMSEGKLVPADVMMELIKAKM------LNSLGTTRGFLLSGFPREKIQCQHFNRQIRPP 133 Query: 131 DCTIILDLPVDIGLKRVQNRY---SLRESACLDYFER-KDVMIHEKRRQIFLDIARNQPD 186 D + L + + + R+ R + R+ +D E + + H + + L + Q Sbjct: 134 DLVLYLYVRNSLLMDRILARAITATERQERGID--ENWRRIKEHSRMIKPILKYYKKQ-- 189 Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212 I+D V +I N V ++ Sbjct: 190 -LVIIDGEKDELEVFQDICNAVDNIL 214 >gi|91092694|ref|XP_971882.1| PREDICTED: similar to putative deoxynucleoside kinase [Tribolium castaneum] gi|270014809|gb|EFA11257.1| hypothetical protein TcasGA2_TC010791 [Tribolium castaneum] Length = 233 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 25/208 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + EG G GKTT ++ ++F DV+V EP ++L + Sbjct: 22 VIVEGNIGCGKTTFLNYFQQF-----DDVNVLAEPVNKWRNCNGYNLL---DKMYSDPKK 73 Query: 67 EAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDS-------SYAYQGERDSSQHLFLD 118 + F + + + + G + L +R + S A G + + +D Sbjct: 74 WSFTFQSYV--QLTILQHHTMKTGHPIKLMERSIYSARHCFVEQMARNGSIERASVSVMD 131 Query: 119 SLQEISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175 + + + ++ D + L + +R+ R E L+YF+ IH + Sbjct: 132 EWFKWAKENCDLSVDLIVYLKTTPETAYQRMLARNRPEEQYVPLEYFQ----DIHNLHEE 187 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATN 203 L P I+D+ + Sbjct: 188 WLLQKRFECPAPVLIIDANLDKSGIMEE 215 >gi|253744290|gb|EET00516.1| Hypothetical protein GL50581_2239 [Giardia intestinalis ATCC 50581] Length = 360 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 6/103 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLSCGVDEF 62 I +G GAGK+T L + + + V V E + + + Sbjct: 66 IVVDGPIGAGKSTFCRKLAEYAREQALQVAVVEEAVALESFSAYGITLEEYYRDPHANAY 125 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + V A +E + +++ DR+L S+ A+ Sbjct: 126 --RFQLAVTQALADQLMEYRYTDKYKDCDLVIFDRWLPSTSAF 166 >gi|241895223|ref|ZP_04782519.1| deoxyadenosine kinase [Weissella paramesenteroides ATCC 33313] gi|241871529|gb|EER75280.1| deoxyadenosine kinase [Weissella paramesenteroides ATCC 33313] Length = 217 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 57/163 (34%), Gaps = 18/163 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSCGV 59 I G GAGKT+ ++L L + + + ++ L+ + Sbjct: 2 IVLSGTIGAGKTSLTTMLAEHLGSEALYESVDDNPILPLFYEDPKRYGFLLQNYFLNKRL 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D + + R E+++ L DR + Q D ++ ++ Sbjct: 62 DNIKDAQGSQLNVIDRSI-FEDLLLFKLNAD----LDRATQTEV--QIYGDLLNNI-MEQ 113 Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + + S ++ PD I + + + L+R++ R E D Sbjct: 114 V-DFSDDAIVKTPDLLIYIHVSFETMLERIKKRGRDFEQIAND 155 >gi|28374307|gb|AAH45275.1| Cmpk1 protein [Xenopus laevis] Length = 227 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 61/217 (28%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A + R Sbjct: 44 GGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----------- 81 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + +GKI+ L R ++ + A+ + D+ Sbjct: 82 -------QYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDN 134 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ D + D + ++R R + + + + EKR Q Sbjct: 135 LQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL---EKRIQT 188 Query: 177 FLD----IARNQPDR--CHIVDSAHSFQSVATNILNI 207 +L I R VD++ S V T + NI Sbjct: 189 YLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNI 225 >gi|290976726|ref|XP_002671090.1| adenylate kinase [Naegleria gruberi] gi|284084656|gb|EFC38346.1| adenylate kinase [Naegleria gruberi] Length = 736 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 38/228 (16%), Positives = 71/228 (31%), Gaps = 53/228 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ G GK T L+ + T + R V+ E G + Sbjct: 536 IIIMGLPGCGKGTQSKLIAE---KYGLVHIST--------GDLVREVI--SKQTELGKKC 582 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR-----FLDSSYAYQGERDSSQHLFLDSLQ 121 EAI+ + +I P + DR + G ++ +L Sbjct: 583 EAIINTGGL--LPDELINP-------IFLDRILKEDCKTKGWILDGYPRTTSNLEFVRAN 633 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERK--D 166 ++V I L L D ++R R + + + + ++ D Sbjct: 634 RLNVTG-----VIFLTLDDDTAIERQCGRITDPLTGAIYHSKFLPPTEEIRERLVKRATD 688 Query: 167 VMIHEKRR-QIFLDIARN----QPDRC-HIVDSAHSFQSVATNILNIV 208 K R +++ D P+ H +D+ S + V I ++ Sbjct: 689 NEEKAKIRVKVYHDEMDQAFDWFPEEISHKIDATPSPEEVFEAIKKLL 736 >gi|313124771|ref|YP_004035030.1| deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281334|gb|ADQ62053.1| Deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 232 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 49/231 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ ++L ++L G P E+ +L + Sbjct: 4 IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 + +F H I+ AL + +L DR + DS + + G + + D Sbjct: 51 TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYD 106 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 L E ++E+ PD + +++ + ++R+Q R E D E ++ Sbjct: 107 ELLESMMKELERMPKRHPDLLVHINVSYETMIRRIQKRGRSYEQLSFDPTLE----DYYK 162 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + + + + P ++D H V I + ++ Sbjct: 163 RMLRCYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211 >gi|260101903|ref|ZP_05752140.1| deoxyadenosine kinase [Lactobacillus helveticus DSM 20075] gi|260084292|gb|EEW68412.1| deoxyadenosine kinase [Lactobacillus helveticus DSM 20075] Length = 215 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + L+H I A+ + + DR + D+ + A D ++ D L Sbjct: 53 --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKVADPTEFKIYDDL 109 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E +++ PD I + + +D L R++ R E D Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 155 >gi|282933308|ref|ZP_06338694.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1] gi|297205266|ref|ZP_06922662.1| deoxyguanosine kinase [Lactobacillus jensenii JV-V16] gi|281302604|gb|EFA94820.1| deoxyguanosine kinase [Lactobacillus jensenii 208-1] gi|297149844|gb|EFH30141.1| deoxyguanosine kinase [Lactobacillus jensenii JV-V16] Length = 223 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 89/237 (37%), Gaps = 61/237 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I G GAGK++ S+L ++L G P E+ + +L + Sbjct: 4 IVLSGPIGAGKSSLTSILSKYL-------------GTQPFYESVDNNPVLPLFYKDPKKY 50 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 A + +F H I+ AL + +L DR + DS + + G + D Sbjct: 51 AFLLQIFFLNTRFH---SIKAALTDDNNVL-DRSIYEDSLFFHMNADIGRATKEEVATYD 106 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDY---FE---RKD 166 L + ++E+ PD + +D+ + +KR+Q R RE LDY E ++ Sbjct: 107 ELLDSMMKELEHMPKKHPDLLVHIDVSYETMIKRIQKRG--REFEQLDYDPTLEDYYKRL 164 Query: 167 VMIHEKRRQIF------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +E + + LD ++ DR Q V I+ + E+ Sbjct: 165 LSYYEPWYENYDYSPKIKIDGDKLDFMASEKDR----------QEVLDTIIAKLKEM 211 >gi|50913498|ref|YP_059470.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS10394] gi|71902767|ref|YP_279570.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS6180] gi|94987735|ref|YP_595836.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS9429] gi|94991603|ref|YP_599702.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus pyogenes MGAS2096] gi|94993506|ref|YP_601604.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus pyogenes MGAS10750] gi|50902572|gb|AAT86287.1| Deoxyadenosine kinase [Streptococcus pyogenes MGAS10394] gi|71801862|gb|AAX71215.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS6180] gi|94541243|gb|ABF31292.1| deoxyadenosine kinase [Streptococcus pyogenes MGAS9429] gi|94545111|gb|ABF35158.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus pyogenes MGAS2096] gi|94547014|gb|ABF37060.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus pyogenes MGAS10750] Length = 229 Score = 48.1 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV P + Sbjct: 17 MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 63 KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 121 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 122 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 177 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211 + + + P +D +V I + EL Sbjct: 178 QVHGEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 226 >gi|22327339|ref|NP_198367.2| adenylate kinase family protein [Arabidopsis thaliana] gi|17979434|gb|AAL49859.1| putative adenylate kinase [Arabidopsis thaliana] gi|22136756|gb|AAM91697.1| putative adenylate kinase [Arabidopsis thaliana] gi|110740593|dbj|BAE98401.1| adenylate kinase -like protein [Arabidopsis thaliana] gi|332006553|gb|AED93936.1| adenylate kinase family protein [Arabidopsis thaliana] Length = 588 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 69/232 (29%), Gaps = 49/232 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T L+ + D+ GT + A+ + + Sbjct: 84 ISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFM---NSGSLVPD 140 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 I A RL R E L D F R +Q LD L Sbjct: 141 EIVIAMVAGRL------SREDAKEHGW-LLDGF---------PRSFAQAQSLDKLN---- 180 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171 V PD I+LD+P +I + R R + + + E Sbjct: 181 --VKPDIFILLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEE 238 Query: 172 KRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 K + QI+ I D +D+ + V ++ ++ KR+ Sbjct: 239 KVKARLQIYKQNSEAIISAYSDVMVKIDANRPKEVVFEETQTLLSQIQLKRM 290 >gi|296122301|ref|YP_003630079.1| guanylate kinase [Planctomyces limnophilus DSM 3776] gi|296014641|gb|ADG67880.1| guanylate kinase [Planctomyces limnophilus DSM 3776] Length = 206 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 46/214 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G+GKTT VH E P +A E E Sbjct: 19 VVLSGPSGSGKTTI--------------VHHLLEQSPIPLTKAISATTRPPRKGEIDGED 64 Query: 67 EAIVF---AAARLDHVENVIRPA--LMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDS 119 + ARL H + + A G + + R + FL+ Sbjct: 65 YYFLSHEEFMARL-HQQEFVETAEVYGAGYW-------YGTLVSEIERARALNSWSFLEI 116 Query: 120 LQEISVQ--EVMPD-CTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 E +++ ++ PD TI L P +I +R++ R + E I ++ +Q Sbjct: 117 DVEGALRVVQLYPDAITIFLKTPSPEIIEQRLRGRGTDSEE-----------TIQKRLKQ 165 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 L++A+ R I++ + I+ ++ Sbjct: 166 AHLELAQADQYRYQIIN--DHLDAAVQRIIALLQ 197 >gi|168184383|ref|ZP_02619047.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf] gi|182672560|gb|EDT84521.1| serine-type D-Ala-D-Ala carboxypeptidase [Clostridium botulinum Bf] Length = 196 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 64/214 (29%), Gaps = 52/214 (24%) Query: 14 GAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEFG------- 63 G+GK+T + L+++ Y+ TR+P E H+ L D Sbjct: 17 GSGKST----IAELLEKEGYNYIESYTTRKPRYK--GERG-HIFLDSINDRNDIDILNNG 69 Query: 64 --AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + I + + +H +G+ S Y + + + L +D + Sbjct: 70 YYPKENVIAYTCYKDEHYYATKEQYKNKGR---------SIYIVEVKGVNELRLEIDDAE 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + L I R+ RY + +Y + + Sbjct: 121 I---------LVLYLKADKQIRKDRMIKRYIENGNVSNNYLIAEQKA---------QERI 162 Query: 182 RNQPDRC------HIVDSAHSFQSVATNILNIVW 209 + + +++D+ V +I I+ Sbjct: 163 IHDKENFQIIPCDYVIDANMPISEVLKSIKTIIE 196 >gi|332157901|ref|YP_004423180.1| signal recognition particle protein [Pyrococcus sp. NA2] gi|331033364|gb|AEC51176.1| signal recognition particle protein [Pyrococcus sp. NA2] Length = 322 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G+GKTT I+ L +L++ + V + T A A + G + Sbjct: 126 ILFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQI--EEHAKRIGVKV 181 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R + +D +++I+ Sbjct: 182 IKHKYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKIA- 231 Query: 126 QEVMPDCTII 135 + P+ I Sbjct: 232 RVTKPNLVIF 241 >gi|322503141|emb|CBZ38225.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 272 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 29/177 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + EG++G GKT L L T P R G +E A A Sbjct: 68 VVVEGLDGTGKTLVTRTLAEKLSG---VAISTPPPQFAEIRSTFR------GQEEAVARA 118 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123 ++AA +++ + +++ DR+ S+ A D++ Sbjct: 119 ---FYSAANYIAAASILAASQS--SVVVVDRWWCSTCAMALANGCCYDSLPPSGDAVYRW 173 Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVM 168 PD +L + + +R + S ++ + R +++ Sbjct: 174 PEDLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSQSEMRRVAMEAYRRTNML 230 >gi|323341595|ref|ZP_08081828.1| deoxynucleoside kinase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464020|gb|EFY09213.1| deoxynucleoside kinase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 219 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 39/206 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG+ G GK++ + +L + + Y+ EP + +L + + Sbjct: 21 IVIEGVVGVGKSSLMRILGQ----EGYE--EFEEP-------VVDNPVLDKFYHDRCRYS 67 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQG-----ERDSSQHLFL 117 + F R +H++ + + DR + D+ +A D ++ Sbjct: 68 FPLQVFFLNKRFEHIKQAKDVSKA-----VMDRSIYGDAIFARMLNLSGEMSDEEFQIYS 122 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE------------SACLDYFERK 165 + LQ + +P + L++ VD + R++ R E +YF+ Sbjct: 123 ELLQNMLEHVHVPKLMVYLEISVDEAMNRIKKRGRDYELIVEREYWEKLNYEYSNYFDNY 182 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIV 191 D+ K LD N+ DR +++ Sbjct: 183 DLSPMLKINVDHLDFENNEADRIYVL 208 >gi|146074845|ref|XP_001462622.1| hypothetical protein [Leishmania infantum JPCM5] gi|134066700|emb|CAM65160.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 272 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 29/177 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + EG++G GKT L L T P R G +E A A Sbjct: 68 VVVEGLDGTGKTLVTRTLAEKLSG---VAISTPPPQFAEIRSTFR------GQEEAVARA 118 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL---DSLQEI 123 ++AA +++ + +++ DR+ S+ A D++ Sbjct: 119 ---FYSAANYIAAASILAASQS--SVVVVDRWWCSTCAMALANGCCYDSLPPSGDAVYRW 173 Query: 124 SVQEVMPDCTIILDLP------------VDIGLKRVQNRYSLRESACLDYFERKDVM 168 PD +L + + +R + +S ++ + R +++ Sbjct: 174 PEDLPAPDAGFLLCVDEAVRVARIRRRAPEDAEERRLSSHSEMRRVAMEAYRRTNML 230 >gi|4033719|gb|AAC97156.1| unknown [Streptococcus pyogenes] Length = 213 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV +L Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTDVFYEAVDNNP---------VLDFYYQ--DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 47 KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 161 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211 + + + P +D +V I + EL Sbjct: 162 QVHGEYPTWYEDYKVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210 >gi|91076054|ref|XP_966357.1| PREDICTED: similar to cytidylate kinase [Tribolium castaneum] Length = 212 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 66/226 (29%), Gaps = 49/226 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G GAGK T + Y VH+ A + R Sbjct: 15 MAKPKVIFVLGAPGAGKGTQCQKIVDNF---GY-VHL-------SAGDLLREERAKPDSK 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117 +I + EGKI+ + S ++ + + Sbjct: 64 ------------------YGELIETYIREGKIVPVEI----TCSLLENAMKKSGKEKFLI 101 Query: 118 DSL--QEISVQE---VMPD-----CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 D + ++ + D + D P ++ + R R + D + + Sbjct: 102 DGFPRNQNNLDGWNKTLADNVKLLFVLFFDCPKEVCVDRCLGRGAAGSGRSDDNMQSLEK 161 Query: 168 MIHEKRRQIFLDIARNQPDRCHI--VDSAHSFQSVATNILNIVWEL 211 + ++ I + +R + +D+ + + V + + E+ Sbjct: 162 RFNTFTQET-QPIVKYYEERGLVRNIDATKAPEDVFGRVKEVFTEV 206 >gi|255325066|ref|ZP_05366172.1| shikimate kinase [Corynebacterium tuberculostearicum SK141] gi|255297631|gb|EET76942.1| shikimate kinase [Corynebacterium tuberculostearicum SK141] Length = 178 Score = 48.1 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 43/206 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T L L + D H+ + P E + D Sbjct: 15 VVLVGPPGAGKSTIGRRLSHALSCELVDSDHLIEQAKDKPCGEVFSEL---GEPD----- 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 F A +HV AL G ++ S G + L+ + Sbjct: 67 -----FRALEAEHVA----AALRTGGVV-------SL----GGGAVLTDATRELLERHT- 105 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 I LD+ + G +R + A D E ++ E RR + ++A Sbjct: 106 -------VIFLDISPEEGARRTSGDSNRPVLAAADPLEHYRNLV-EARRPYYQEVADY-- 155 Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211 R D+ + Q V +IL + L Sbjct: 156 -RVRT-DA-RTPQQVVGDILGFLDTL 178 >gi|294636245|ref|ZP_06714656.1| hemin import ATP-binding protein HmuV [Edwardsiella tarda ATCC 23685] gi|291090460|gb|EFE23021.1| hemin import ATP-binding protein HmuV [Edwardsiella tarda ATCC 23685] Length = 261 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 30/213 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDE 61 G ++ G GAGK+T + LL +L + R+ PA + A R ++ Sbjct: 32 GELVAIIGPNGAGKSTLMRLLAGYLHPDAGRCTLLGRDLADWPAQQLARRRAVMRQHSAL 91 Query: 62 FGAEAEAIVFAAARL-----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + V A R H + + R G + L DR + + + Sbjct: 92 AFPFSVREVIAMGRAPCPTGHHPQALQRVMQQSGCLPLADRDYRTL----SGGEQQRVQL 147 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEK 172 +L ++ + P + LD L + LR + R+ + +H+ Sbjct: 148 ARALAQLWQPDPQP-RWLFLD-EPTSALDLYHQQQLLRLLHGMTR--REPLAVCCILHD- 202 Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSV 200 L++A DR ++ + + V Sbjct: 203 -----LNLAALYADRILLLHHGELVANGPPEQV 230 >gi|311745708|ref|ZP_07719493.1| adenylate kinase [Algoriphagus sp. PR1] gi|126575151|gb|EAZ79501.1| adenylate kinase [Algoriphagus sp. PR1] Length = 194 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 39/219 (17%) Query: 1 MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M SG++ I G GAGK T L +Q+ T + E LL+ Sbjct: 1 MKSGMYNIVLFGPPGAGKGTQSEKL---IQKYGLTHLSTGDLFRKHLGEGTELGLLAKKY 57 Query: 60 DEFG---AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + I VE I + D F ++ + Sbjct: 58 MNEGHLVPDEVVIKM-------VEEKISETKDSKGFIF-DGFPRTT------AQAEALDK 103 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-- 174 + S ++ + + I LD+P D+ +R++ R + S D + + + + Sbjct: 104 MLSHHDLVISGM-----IALDVPQDVLRERIKERG--KTSNRADDQDDEKINTRIQVYMN 156 Query: 175 -----QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + Q + ++ + I +++ Sbjct: 157 ETLPVAGYYE----QQGKFQKINGVGEIDEIFNQITSVI 191 >gi|79329010|ref|NP_001031966.1| adenylate kinase family protein [Arabidopsis thaliana] gi|332006554|gb|AED93937.1| adenylate kinase family protein [Arabidopsis thaliana] Length = 580 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 69/232 (29%), Gaps = 49/232 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T L+ + D+ GT + A+ + + Sbjct: 84 ISGAPASGKGTQCELIVHKFGLVHISTGDLLRAEVSSGTDIGKRAKEFM---NSGSLVPD 140 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 I A RL R E L D F R +Q LD L Sbjct: 141 EIVIAMVAGRL------SREDAKEHGW-LLDGF---------PRSFAQAQSLDKLN---- 180 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171 V PD I+LD+P +I + R R + + + E Sbjct: 181 --VKPDIFILLDVPDEILIDRCVGRRLDPVTGKIYHIKNYPPESDEIKARLVTRPDDTEE 238 Query: 172 KRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 K + QI+ I D +D+ + V ++ ++ KR+ Sbjct: 239 KVKARLQIYKQNSEAIISAYSDVMVKIDANRPKEVVFEETQTLLSQIQLKRM 290 >gi|258540441|ref|YP_003174940.1| hypothetical protein LC705_02250 [Lactobacillus rhamnosus Lc 705] gi|257152117|emb|CAR91089.1| Putative protein without homology [Lactobacillus rhamnosus Lc 705] Length = 39 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 20/27 (74%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ 29 +G FI+FEG +GAGKT+ ++ L L+ Sbjct: 2 TGTFITFEGPDGAGKTSVLNTLIPKLK 28 >gi|12045124|ref|NP_072935.1| hypothetical protein MG_268 [Mycoplasma genitalium G37] gi|255660363|ref|ZP_05405772.1| hypothetical protein MgenG_02619 [Mycoplasma genitalium G37] gi|1723139|sp|P47510|Y268_MYCGE RecName: Full=Uncharacterized protein MG268 gi|3844864|gb|AAC71490.1| conserved hypothetical protein [Mycoplasma genitalium G37] gi|166078655|gb|ABY79273.1| conserved hypothetical protein [synthetic Mycoplasma genitalium JCVI-1.0] Length = 228 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 72/211 (34%), Gaps = 34/211 (16%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA----IVF 71 GKTT + L +Q V E + +LL+ + + + F Sbjct: 26 GKTTIANTLANHIQAA--KVVCELE-----TNDQLVELLLAKMYERSDELLYSPLFQLYF 78 Query: 72 AAAR---LDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL-QEISV 125 R + N I P + DR F D +A + + + L ++ Sbjct: 79 TLNRFGKYQNNCNTINPT-------IFDRSIFEDWLFAKHNIIRPAVFSYYNQLWNRLAK 131 Query: 126 QEV----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH--EKRRQIFLD 179 + V +P+ +ILD + KR+ R E +D F + + + F++ Sbjct: 132 ELVNKHGVPNLYVILDGDWKLFEKRLFMRNRKVE---IDNFTKNQLYFQNLHRVYTGFME 188 Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + I+D+ ++ IL + Sbjct: 189 AVCNDFGINYCIIDAKLPIVTIIKMILEKLK 219 >gi|228472360|ref|ZP_04057125.1| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase [Capnocytophaga gingivalis ATCC 33624] gi|228276228|gb|EEK14963.1| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase [Capnocytophaga gingivalis ATCC 33624] Length = 369 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 20/174 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ + L + + E P E + Sbjct: 177 YITVEGNIGAGKTSLATRLAEDFSGQ----LLLEEFASNPFLEDFYK-----DSQRYALA 227 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERDSSQHLFL--DSLQE 122 E F R ++ + + + + + D + S S + E + L + Sbjct: 228 TELS-FLKDRYKQLQQTL--SQNKHTLWVAD-YAFSKSLIFAMETLPLKEYNLYEELFYL 283 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEK 172 + + + PD I L D LK +Q R E A L+ E+ + ++ Sbjct: 284 LFERMIKPDLYIYLHQNTDSLLKNIQKRGRSFETPISKAYLERIEQSYLSFLQR 337 >gi|291613417|ref|YP_003523574.1| deoxynucleoside kinase [Sideroxydans lithotrophicus ES-1] gi|291583529|gb|ADE11187.1| deoxynucleoside kinase [Sideroxydans lithotrophicus ES-1] Length = 213 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 21/211 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ +I EG G GKT+ L ++ + + +P P Sbjct: 3 LSKYRYIVVEGPIGVGKTSLAQRLAEHVEVQ----PLLEKPQDNPF---LASFYQDPVRY 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFL 117 + + F R++ ++ + L + + + D +L D+ +A D L+ Sbjct: 56 ALPTQ---LFFLFQRINEARDMAQMDLFQTRT-ISD-YLFEKDALFARLTLSDDEYKLYQ 110 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKR 173 Q +S Q PD I L P +RV+ R + E + D + Sbjct: 111 TIYQGLSPQVPTPDLVIYLQAPTYALAERVRRRGNRYERSIQDDYLARLADSYGEFFHQY 170 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + L + ++ VD++ F+ + I Sbjct: 171 DEAPLLVVNSEHLNF--VDNSDDFELLLDRI 199 >gi|163914947|ref|NP_001106465.1| adenylate kinase 5 [Xenopus (Silurana) tropicalis] gi|158254016|gb|AAI54084.1| LOC100127649 protein [Xenopus (Silurana) tropicalis] Length = 477 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 61/223 (27%), Gaps = 46/223 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVL 54 + I G G+GK T L R E T ++ + ++ Sbjct: 288 LKKAKVIFVLGGPGSGKGTQCEKLAH---RYGLSPLAVSELLQSDLATFTERSKLIKDIM 344 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 E V+ + L K + + G ++ Sbjct: 345 EHGDQVPMDIILEI----------VKETMSSCLGNSK----------GFLFDGFPRETKQ 384 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +E + P+ + LD + R+Q R ++ +R Sbjct: 385 A-----EEFECKISKPNIVLYLDCSAETMTSRLQKRSKASHRNDIN------TETIRRRL 433 Query: 175 QIFLDIAR---NQPDR---CHIVDSAHSFQSVATNILNIVWEL 211 + + DR + +++ S + V +I + V + Sbjct: 434 EAYYQAINPIITYYDRKSLLYKINAEKSPEDVFLHICSAVDSV 476 >gi|320450935|ref|YP_004203031.1| putative deoxynucleoside kinase subfamily [Thermus scotoductus SA-01] gi|320151104|gb|ADW22482.1| putative deoxynucleoside kinase subfamily [Thermus scotoductus SA-01] Length = 202 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 30/170 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFG 63 ++++ G G+GK++ +LL G P EA L + G Sbjct: 1 MYLAIAGNIGSGKSSLTALLSEAF-------------GLKPVYEAVSENPYLEDFYRDMG 47 Query: 64 AEAEA--IVFAAAR-LDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118 A A + F A R H+ V + ++ DR + D+ Q D Sbjct: 48 AYAFHSQVFFLARRVRQHLLEV-----NGARAVVQDRTVYEDALVFAQNLYREGHLKERD 102 Query: 119 S-----LQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L + + PD I L + +R++ R E D + Sbjct: 103 WRTYLDLFQSVSPALRKPDLLIYLRASLPTLRERIKKRGRPFEQNLPDRY 152 >gi|114630605|ref|XP_507800.2| PREDICTED: similar to Deoxycytidine kinase (dCK) [Pan troglodytes] Length = 260 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 85/238 (35%), Gaps = 36/238 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREP------GGTPAAEAAR 51 IS EG A K+T +++LK+ + + +V T++ + Sbjct: 24 ISIEGNIAADKSTFVNILKQLCEDWEVVPEPVARRCNVQSTQDEFEELTTSQKNGGNVLQ 83 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAY 105 + F + A + + R +++ +P L + + DR++ +S Y Sbjct: 84 MMCKKPERWSFTFQTYACL-SRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLY 142 Query: 106 QGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CL 159 + E + + D + Q + D I L + L R+ R E L Sbjct: 143 ESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIYLRGRNEEQGIPL 202 Query: 160 DYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +Y E+ + ++H + F D + P +D F+ +++ V E + Sbjct: 203 EYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKYESLVEKVKEFL 257 >gi|86160101|ref|YP_466886.1| deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-C] gi|85776612|gb|ABC83449.1| Deoxynucleoside kinase [Anaeromyxobacter dehalogenans 2CP-C] Length = 215 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 53/173 (30%), Gaps = 41/173 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +I+ EG G GKTT +L L AR VL + Sbjct: 1 MERPRYIAVEGPIGVGKTTLAQVLAERL--------------------GARLVLEEAEAN 40 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYA-YQGERDSS-- 112 F F A R H L+ + D F S+ A Y +D Sbjct: 41 PFLPA-----FYADRKKHAFQAQVFFLLSRFQQQQALFQQDLFSSSTVADYLFAKDRIFA 95 Query: 113 -------QHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + + E + + V PD I L D+ L RV+ R E Sbjct: 96 TLTLEPAELALYRQIHELLGPRVVRPDLVIYLQARTDVLLSRVKKRGRDFERG 148 >gi|225010433|ref|ZP_03700904.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Flavobacteria bacterium MS024-3C] gi|225005262|gb|EEG43213.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Flavobacteria bacterium MS024-3C] Length = 382 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 56/189 (29%), Gaps = 21/189 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKTT S++ K P E F E Sbjct: 181 FIAIEGNIGAGKTTLSSMISEDFNAKLILEGFADNPFLPKFYE-------DQARYAFPLE 233 Query: 66 AEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEI 123 F A R + L + ++ D + S + Q + L Sbjct: 234 MS---FLAERYQQFTESTSQLDLFKNFMV-SDYDIYKSLIFAQITLGKEEFALYRKLFGF 289 Query: 124 SVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 Q+ PD I L + L+ + R E D EK Q +LD + Sbjct: 290 MYQDAKVPDAYIYLYQNTERLLENIAKRGRDYEKTI-------DAEYLEKINQGYLDFIK 342 Query: 183 NQPDRCHIV 191 ++ Sbjct: 343 THHQNHQLI 351 >gi|328464068|gb|EGF35555.1| deoxyadenosine kinase [Lactobacillus helveticus MTCC 5463] Length = 215 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L L + + V P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAEHLGTQAFYEGVDSNP------------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + L+H I A+ + + DR + D+ + A D ++ D L Sbjct: 53 --FLLNTYLLNHRLAQINQAIQDKNSV-SDRSIYEDALFFKMNADSKIADPTEFKIYDDL 109 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E +++ PD I + + +D L R++ R E D Sbjct: 110 LENMMEDTPGNPSKKPDLLIYIHVSLDTMLDRIKKRGRSFEQISTD 155 >gi|260890002|ref|ZP_05901265.1| dTMP kinase [Leptotrichia hofstadii F0254] gi|260860608|gb|EEX75108.1| dTMP kinase [Leptotrichia hofstadii F0254] Length = 64 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 9/48 (18%), Positives = 21/48 (43%) Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 + A A +++++ R + G I++ DR+ S+ +Q Sbjct: 11 AESVNAYAASVLYSVDRFASFKTDWEEFYNNGGIVISDRYTISNMIHQ 58 >gi|94989614|ref|YP_597714.1| deoxyadenosine kinase / deoxyguanosine kinase [Streptococcus pyogenes MGAS10270] gi|94543122|gb|ABF33170.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Streptococcus pyogenes MGAS10270] Length = 229 Score = 48.1 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 75/232 (32%), Gaps = 39/232 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV P + Sbjct: 17 MLIVLAGTIGAGKSSLAAALGNHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 63 KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 121 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 122 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIEKRGRSFEQVDGNPSLEQ----YYH 177 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 + + + P +D S V + L V ++V ++ L Sbjct: 178 QVHGEYPTWYEDYKVSPK--MKIDGN-SLDFVQNPDDLATVLQMVDDKLKEL 226 >gi|327279438|ref|XP_003224463.1| PREDICTED: UMP-CMP kinase-like [Anolis carolinensis] Length = 196 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 63/217 (29%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A + R G Sbjct: 10 GGPGAGKGTQCARVVEK-----------YGYTHLSAGDLLRDERKRPGS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + +GKI+ L R +D + A Q + D+ Sbjct: 48 -------QYGELIENYIKDGKIVPVEITISLLKRAMDETMAANAQKNKFLIDGFPRNEDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I + R R + + + EKR Sbjct: 101 LQGWNKTMDGKADVSFVLFFDCENEICINRCLERGKSSGRTDDNR---ESL---EKRIHT 154 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L+ + + + VD++ S V ++ I Sbjct: 155 YLESTKPIIDLYEKMGKVRKVDASKSVDEVFEKVVTI 191 >gi|294660489|ref|NP_853272.2| deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)] gi|284812151|gb|AAP56840.2| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(low)] gi|284930758|gb|ADC30697.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. R(high)] gi|284931337|gb|ADC31275.1| Deoxynucleoside kinase [Mycoplasma gallisepticum str. F] Length = 215 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 67/230 (29%), Gaps = 46/230 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEF 62 + I G+ GK+ + + RE + + E Sbjct: 1 MLIGISGMVACGKSVLSKRIHEHYK----TSLFLREFKEDDVVFNKFLEWLYEKRPNTEI 56 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGK-----ILLCDRFL---------------DSS 102 +A + + + E K ++ DRF D Sbjct: 57 SFQAYIC---ENHSTKMNEIWKNYRSENKDSKKDHIIIDRFCIEHNIFARLILAKKGDKF 113 Query: 103 Y-AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 AYQ D + +D EI PD I LD+ + KR+ R E D Sbjct: 114 LNAYQAMFD----MMIDK-NEI------PDIAIFLDVNFENFKKRLFKRNRKVEVNNFD- 161 Query: 162 FERKDV--MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQ-SVATNILNIV 208 E D +H+ R+ F + + +D+ + V + I+ Sbjct: 162 -ENLDYWKELHQNYRKNFEILCEKYKVNAYYIDTNDMTEIEVFNKAVEII 210 >gi|158316732|ref|YP_001509240.1| uridine kinase [Frankia sp. EAN1pec] gi|158112137|gb|ABW14334.1| Uridine kinase-like protein [Frankia sp. EAN1pec] Length = 268 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 54/188 (28%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-----------VTREPGGTPAAE------- 48 ++ +G + AGKTT L L + V + R +P Sbjct: 33 VAIDGPDAAGKTTLADDLAGTLADRGRPVIRASVDGFHQPRLIRRGSLSPDGYFFDAFDY 92 Query: 49 -AARHVLLSCGVDEFGAEAEAIVFAAARLDHVEN--VIRPALME--GKILLCDRFLDSSY 103 A RH+LL + + AA DH+ + + P +L+ D Sbjct: 93 TALRHLLLDPLSPDGDRR-----YRAAAFDHLRDAPLDSPTHEAVSDAVLIVD------- 140 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--- 160 L D L++ D ++ L + L+R R + D Sbjct: 141 --------GVFLLRDELRDYW------DLSVFLQISPAESLRRAM-RRDVALFGSPDVVR 185 Query: 161 -YFERKDV 167 +E + + Sbjct: 186 ERYEARYL 193 >gi|118394990|ref|XP_001029852.1| hypothetical protein TTHERM_01276410 [Tetrahymena thermophila] gi|89284125|gb|EAR82189.1| hypothetical protein TTHERM_01276410 [Tetrahymena thermophila SB210] Length = 488 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 21/203 (10%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA---IVFA 72 GKT+ + ++ ++ Y V V E T A +L + ++ Sbjct: 107 GKTSGLVYVQEKMKELGYLVFVVPEAATTIANGGG---MLDMQNYNMVQAIQFQTNLLKL 163 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 RL++ I + I+LCDR L AY ++ ++ L +++L E+ +++ D Sbjct: 164 QIRLENTMTQIAKLSRKKAIVLCDRGLMDGQAYVEPKEWAELLNINNLNEVLMRDDRYDL 223 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L + +G ++ N+ + FE + ++ +K + +L P+ I Sbjct: 224 VIHL-VTAALGAEKFYNQQNSA------RFETAEEAAIMDKKTQDAWL----GHPNH-VI 271 Query: 191 VDSA-HSFQSVATNILNIVWELV 212 VD+ SF+ T +LN V + V Sbjct: 272 VDNNVKSFEEKLTKMLNAVKQCV 294 >gi|228998402|ref|ZP_04157993.1| hypothetical protein bmyco0003_29640 [Bacillus mycoides Rock3-17] gi|228761323|gb|EEM10278.1| hypothetical protein bmyco0003_29640 [Bacillus mycoides Rock3-17] Length = 192 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 37/189 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT R L++ + + P G E +++ L E Sbjct: 5 ISLQGPMASGKTTL----ARRLEKHGFPILY-ENPYG--IVEKRKNLNLDIYTKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDS---SYAYQGERDSSQHLFLDSLQE 122 F + +E I+ G+I++ DR + Y + + L++ Sbjct: 54 ----FITNQRMFIEAKIKEIQNARGRIVIFDRGSEDIEFYTIYFPKLIGMDWDIENELKD 109 Query: 123 --ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ D LD+ I +R +N + R S FE++ L++ Sbjct: 110 ELYKLRRCRSDAIFYLDVSKKILQERKKNDNTRRRST----FEKQ------------LEL 153 Query: 181 ARNQPDRCH 189 A + Sbjct: 154 AEIEKQWYK 162 >gi|311739526|ref|ZP_07713361.1| shikimate kinase [Corynebacterium pseudogenitalium ATCC 33035] gi|311305342|gb|EFQ81410.1| shikimate kinase [Corynebacterium pseudogenitalium ATCC 33035] Length = 178 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 67/206 (32%), Gaps = 43/206 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T L L + D H+ + P E + D Sbjct: 15 VVLVGPPGAGKSTIGRRLSHALSCELVDSDHLIEQAKDKPCGEVFSEL---GEPD----- 66 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 F A +HV AL G ++ S G + L+ + Sbjct: 67 -----FRALEAEHVA----AALRTGGVV-------SL----GGGAVLTDSTRELLERHT- 105 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 I LD+ + G +R + A D E ++ E RR + ++A Sbjct: 106 -------VIFLDISPEEGARRTSGDSNRPVLAAADPLEHYRNLV-EARRPYYQEVADY-- 155 Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211 R D+ + Q V +IL + L Sbjct: 156 -RVRT-DA-RTPQQVVGDILGFLDTL 178 >gi|255561492|ref|XP_002521756.1| uridylate kinase plant, putative [Ricinus communis] gi|223538969|gb|EEF40566.1| uridylate kinase plant, putative [Ricinus communis] Length = 301 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 57/214 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69 G G GK+T + L + + Y + + R + L Sbjct: 101 GGPGGGKSTQCANLAKQI---GY--------THLSSGDLLRKAMKLDAENGTM------- 142 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-----------QHLFLD 118 I + EGK + D + Q D S + + Sbjct: 143 -------------IESIIKEGKSVPSD---VTMRILQKAIDESGNDKFLLDGFPRDEEIR 186 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RR 174 S E + + P+ + D + KR+ +R R D RK E+ Sbjct: 187 SAFETATN-IEPELVLFFDCSAEEREKRILSRNEGRVDDNPDSL-RKRFKYFEEHTLPVV 244 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + VD+A + V + +I+ Sbjct: 245 DYYRS-----KGIVSEVDAAKPTEEVFEKLKSIL 273 >gi|296161790|ref|ZP_06844592.1| deoxynucleoside kinase [Burkholderia sp. Ch1-1] gi|295887954|gb|EFG67770.1| deoxynucleoside kinase [Burkholderia sp. Ch1-1] Length = 226 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 55/160 (34%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G GKT+ L + + + P P E + Sbjct: 19 YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLERFYR-----DTARYALP 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + FA R ++V A + G L+ D F+ + +A ++ L+ Sbjct: 70 TQLH-FALQRAQQAQDV-SAAHLSGTPLIAD-FMTQKNDIFARLTLQEDEWQLYRALAAR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166 >gi|289192995|ref|YP_003458936.1| cytidylate kinase [Methanocaldococcus sp. FS406-22] gi|288939445|gb|ADC70200.1| cytidylate kinase [Methanocaldococcus sp. FS406-22] Length = 181 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI P+++ +R+ R S+ + L ++ ++ ++I+ Sbjct: 85 WMLLKNGIKPDLTIWFKAPLEVRAERISKRESISKEIALKKMVEREASEKKRYKEIYNID 144 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRV 216 + ++D++ + V + + + L QK++ Sbjct: 145 LDDLSIYDLVIDTSKWDVEGVFNIVSSAIDNLTQKQI 181 >gi|160880353|ref|YP_001559321.1| hypothetical protein Cphy_2216 [Clostridium phytofermentans ISDg] gi|160429019|gb|ABX42582.1| conserved hypothetical protein [Clostridium phytofermentans ISDg] Length = 283 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN LFI EGI G+GKTT +L L N++VH+ E Sbjct: 1 MNK-LFI-IEGIPGSGKTTFARMLGDKLTELNHEVHLYVE 38 >gi|300718286|ref|YP_003743089.1| putative lipoprotein [Erwinia billingiae Eb661] gi|299064122|emb|CAX61242.1| putative lipoprotein [Erwinia billingiae Eb661] Length = 252 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 50/171 (29%), Gaps = 32/171 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----------RHVLL 55 I+ G +G+GK+T + L + + + + R++L Sbjct: 17 IAITGCDGSGKSTLAASLVKHFSSQQPTEFLYLGQSSGLIGKWIADLPIIGAPFGRYLLK 76 Query: 56 SCGVDEFGAEA--------EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---- 103 + + R ++R G++L+ DR+ + Sbjct: 77 KSDRVHQRPATPPGNVTALVIFLLSFWRAYKFRKMLRKN-RPGQLLIADRYPQAEVPGFR 135 Query: 104 --AYQGERDSSQHLFLDSLQEISVQEVM-----PDCTII-LDLPVDIGLKR 146 Q + + ++ L+ + P +I LD+ R Sbjct: 136 FDGPQLAKTHGGNRWIGWLRNKEQKLYQWMASYPPLLLIRLDIDAQTAHAR 186 >gi|284161352|ref|YP_003399975.1| signal recognition particle-docking protein FtsY [Archaeoglobus profundus DSM 5631] gi|284011349|gb|ADB57302.1| signal recognition particle-docking protein FtsY [Archaeoglobus profundus DSM 5631] Length = 367 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ + + L Y V + G T A A L G + Sbjct: 173 IVFVGVNGTGKTTTIAKVAKRLIDFGYSVVLAA--GDTFRAGAIEQ--LEEHGKRLGVKV 228 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + ++ A +G I+L D R ++ +D L +I Sbjct: 229 IKHKQGADPCAVIYDALKHAESKGIDIVLAD---------TAGRMHTKKNLIDQLAKI-K 278 Query: 126 QEVMPDCTIILD 137 + PD I +D Sbjct: 279 RVTKPDLVIFVD 290 >gi|71746904|ref|XP_822507.1| adenylate kinase [Trypanosoma brucei TREU927] gi|70832175|gb|EAN77679.1| adenylate kinase, putative [Trypanosoma brucei] gi|261332238|emb|CBH15232.1| adenylate kinase, putative [Trypanosoma brucei gambiense DAL972] Length = 229 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 69/243 (28%), Gaps = 57/243 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD----VHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G G+GKT+ ++LK V E T + R + A Sbjct: 7 GPPGSGKTSVSTVLKERYGFCYVTPIEAVSHAVEYSDTDVGDKLRRYVDEGEPIPDDLLA 66 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 A A R D + G + + + + + Sbjct: 67 RA---VAD--------------------ATRGPDCT---NGFLLNDFPKTAEQARHLKAE 100 Query: 127 EVMPDCTIILDLPVDIGLKR----------------------VQNRYSLRESACLDYFER 164 + PD ++L +P + + R V+ R + + E Sbjct: 101 GIEPDAIVVLSVPDSLLVDRHAGRWVHPSSGRVYHTFYNPPNVKGRDDVTGQPLVQRPED 160 Query: 165 KDVMIHEKRRQIF-----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + +H+ + + L P H VD S SV +I ++ ++ + Sbjct: 161 TEEAVHQGLVKYYESIRGLRAVYGDPRLWHTVDGFASLDSVHVSICRVLDPIIADKTRRW 220 Query: 220 SSK 222 SK Sbjct: 221 WSK 223 >gi|327274228|ref|XP_003221880.1| PREDICTED: deoxycytidine kinase-like [Anolis carolinensis] Length = 256 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 45/244 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 I+ EG AGK+T ++LLK+ + +DV V R + + L Sbjct: 17 IAIEGNIAAGKSTFVNLLKQAGEE--WDVVPEPVARWCNVQNCQDECEELSDSQKCGGNL 74 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH--VENVIRPALMEGKILL------CDRFLDSS 102 L ++ + A R +E I+ A E ++ DR++ +S Sbjct: 75 LQMMYEKPERWSFTFQSYACLSRIRAQLKSLEGKIKEA--ENPVVFFERSVYSDRYIFAS 132 Query: 103 YAYQGERDSSQHLFL--DSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 Y+ + + + D ++ Q + D I L + L R+ R E Sbjct: 133 NLYESDCMNETEWTIYQDWHNWMNQQFGSCLELDGIIYLRATPEKCLNRIYVRGRDEEQG 192 Query: 158 -CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF---QSVATNILNIV 208 ++Y E+ + + H R F + + P +D F + N++ V Sbjct: 193 IPIEYLEKLHYKHESWLQHRTLRMDFEYL-QELP--ILTLDVNEDFKGNKDRHENMIEKV 249 Query: 209 WELV 212 E + Sbjct: 250 KEFL 253 >gi|326532168|dbj|BAK01460.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 243 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/217 (15%), Positives = 68/217 (31%), Gaps = 46/217 (21%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCG 58 FI+F G G+GK T S + + + R GT E ++ Sbjct: 60 FIAFVLGGPGSGKGTQCSRIASDF---GFSHVSAGDLLRNEISSGTDQGEWILEIIREGR 116 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + ++ V I + K +L D F R + + Sbjct: 117 IVP----------SEITVELVRKAIESSTA--KRVLIDGF---------PRCEENRIAFE 155 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RR 174 + PD + D P D +KR+ +R R ++ +K + + E Sbjct: 156 KIT-----GTEPDLVLFFDCPEDEMVKRLLSRNQGRVDDNIETI-KKRLKVFESLNLPVV 209 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + + H +++ + + + + L Sbjct: 210 EYYSSRGKA-----HKINATGTEDEIFEAVRKLFSSL 241 >gi|302336599|ref|YP_003801805.1| deoxynucleoside kinase [Spirochaeta smaragdinae DSM 11293] gi|301633784|gb|ADK79211.1| deoxynucleoside kinase [Spirochaeta smaragdinae DSM 11293] Length = 214 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 46/164 (28%), Gaps = 22/164 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ G GAGK+T + L L + Y VT P R Sbjct: 3 KYVVLAGNIGAGKSTLVRKLADRLGFRPYYEPVTENPYLKDFYSDMRRWAFHSQT----- 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117 + R H+ + ++ DR + +A Q Sbjct: 58 ---FFLTHRVRTHHL------LAEDPFSVVQDRSMYEDAEVFARNLYEQQSMTKRDWETY 108 Query: 118 DSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L + PD + L V KR+ R E++ D Sbjct: 109 QELYHTLITMLPPPDLIVYLRASVTTLKKRIALRGRNFEASISD 152 >gi|299141928|ref|ZP_07035063.1| hypothetical protein HMPREF0665_01511 [Prevotella oris C735] gi|298576779|gb|EFI48650.1| hypothetical protein HMPREF0665_01511 [Prevotella oris C735] Length = 367 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 6/108 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I G AGKTT + + Y V E + ++ + + Sbjct: 7 MKTVKKIVLTGGPCAGKTTALVKVIEHFSSLGYKVFTIPEVPTMFSQSGMDYLTTNKKLF 66 Query: 61 EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A E + + + E +++CDR AY Sbjct: 67 YEGEKATLEVQLALEDKFQRMAE----QCEEPAVIICDRGAMDISAYM 110 >gi|227548121|ref|ZP_03978170.1| dephospho-CoA kinase [Corynebacterium lipophiloflavum DSM 44291] gi|227079783|gb|EEI17746.1| dephospho-CoA kinase [Corynebacterium lipophiloflavum DSM 44291] Length = 199 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 36/212 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTR-------EPGGTPAAEAAR----HVLLSCGV 59 GI G+GK+T L L+ Y V EPG AE A ++ G Sbjct: 9 GI-GSGKSTVAKL----LREAGYPVVDADQVARDNMEPGSPVLAEVAEAFGADIVRDDGS 63 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A R + + PA+ +R + QG + + L Sbjct: 64 LDRAELARRAFSDEERTRTLNAITHPAIRAE----SNR-RFAELETQGAAAAVYDMPL-- 116 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L E+ + E M D TI++D+ D ++R+ + L E + R+ + Sbjct: 117 LVELGLDEEM-DLTIVVDVHPDERVRRLVSSRGLDEQDARNRISRQISDAERR------- 168 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A+ ++D+ S + + + +V + Sbjct: 169 -AKAD----VVIDNNGSLEELKQQVNEVVSRI 195 >gi|291319955|ref|YP_003515213.1| deoxyguanosine kinase [Mycoplasma agalactiae] gi|290752284|emb|CBH40255.1| Deoxyguanosine kinase [Mycoplasma agalactiae] Length = 217 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 78/229 (34%), Gaps = 31/229 (13%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I GI G +GK+T + L + + + P + Sbjct: 1 MII---GISGMISSGKSTLVKKLSDYYPN---SIFIEEFSDDDPVFNTFLKWCYEKQPNT 54 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQH--- 114 A ++ + D L I+ DRF+ Y + S ++ Sbjct: 55 DIAFQSFLIESL--TDSFYKHKEEFLKNHNIIEDHIFLDRFILEHYIFAKATLSKKNKKY 112 Query: 115 -LFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD-----V 167 D L I + PD + +D+ + +R+ R E +++E ++ + Sbjct: 113 FEAFDKLFAHIYDSKCNPDFALFIDINWETFKQRIFQRGRKVEID--NFYENEEYFKHLL 170 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQKR 215 I+++ F+D+A I+DS S +V + + ++ + Sbjct: 171 SIYKRT---FVDLASKYNIPYVIIDSNNKSNSNVLSEATVAIANYLKNK 216 >gi|229552016|ref|ZP_04440741.1| possible deoxyguanosine kinase [Lactobacillus rhamnosus LMS2-1] gi|258539431|ref|YP_003173930.1| deoxynucleoside kinase [Lactobacillus rhamnosus Lc 705] gi|229314593|gb|EEN80566.1| possible deoxyguanosine kinase [Lactobacillus rhamnosus LMS2-1] gi|257151107|emb|CAR90079.1| Deoxynucleoside kinase [Lactobacillus rhamnosus Lc 705] Length = 242 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 75/230 (32%), Gaps = 36/230 (15%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA-IVFA 72 GAGKT+ +L ++ + G A + + A I F Sbjct: 9 GAGKTSLTKVLSADMEA---PAYYEDVEGNGMIANMLQKFYGAGADSRKRTGAMLQIAFL 65 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLDSLQEISVQ 126 R ++ + + D L+S + GE D + +L + Sbjct: 66 TFRYQQLKKAVTQENA-----IMDSSLESDFVMASQLHKHGEIDDIDYNVYVTLSQEMQS 120 Query: 127 EV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V +PD + L + D L +Q+R E + + V +++ + D Sbjct: 121 NVNGSPWNGLPDLAVYLKIDPDHELDEIQSRGRDMEDI---RQKPELVAYYQRVNAAYQD 177 Query: 180 IARNQ-PDRCHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220 A+ +D SA +V I + + +L ++SP + Sbjct: 178 WAKGYTRSSMITIDRDRYDFMHSAADRATVLDQIESKLVDL--GKLSPQT 225 >gi|328791153|ref|XP_625219.3| PREDICTED: deoxynucleoside kinase [Apis mellifera] Length = 237 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 27/209 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRF-----LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + EG G+GKTT +S K F LQ V + R GGT E L+ Sbjct: 27 VCIEGNIGSGKTTFLSHFKEFNNTTVLQE---PVELWRNVGGTNLLE-----LMYTDPKR 78 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + ++ V H + P + + + R + + + + L+ Sbjct: 79 YSFLFQSYVQLTMLQLHTYKSLMPYKIMERSVFSSRCFIENMKRKKLLHDVEVVILEDWY 138 Query: 122 EISVQ--EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI--- 176 + ++ ++ D + L D+ R++ R ES + ++ I Sbjct: 139 DWCIENADIETDLIVYLRTSPDVVYHRMKTRARKEESLV-------SLEYLKQLHNIHDE 191 Query: 177 --FLDIARNQPDRCHIVDSAHSFQSVATN 203 + P ++D + + + Sbjct: 192 WLYYQTLFTVPAPVLVLDGNKNLEEMVKE 220 >gi|91781888|ref|YP_557094.1| putative deoxynucleoside kinase [Burkholderia xenovorans LB400] gi|91685842|gb|ABE29042.1| Putative deoxynucleoside kinase [Burkholderia xenovorans LB400] Length = 226 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 17/161 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGA 64 +++ EG G GKT+ L + + + P P E R + + Sbjct: 19 YLAIEGPIGVGKTSLARRLAQRWSMQ----EMFERPQDNPFLERFYRDTVRYALPTQLH- 73 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 FA R ++V A + G L+ D F+ + +A ++ L+ Sbjct: 74 ------FALQRAQQAQDV-SAAHLSGTPLIAD-FMTQKNDIFARLTLQEDEWQLYRALAA 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 126 RLEVSAPAPDFVVYLQASPEVLFARIQKRAVPMELQISDAY 166 >gi|1361528|pir||H64211 guanylate kinase (EC 2.7.4.8) - Mycoplasma genitalium Length = 259 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 24/176 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 N G G G GK+T + L + + Y + T E + Sbjct: 73 NQGRIFVITGPSGVGKSTLVKALLDHFKEQLFYSISATTRKKRISEKEGIDYFFKDKDEF 132 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + +A + A +H ++ S A Q + L L+ Sbjct: 133 ENLIKQDAFIEWACYNNHYYGTLK-----------------SQAEQAIKSGIN-LMLEIE 174 Query: 121 QEISVQ--EVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + ++Q P +++ + LKR++ R E+ E+ + + Sbjct: 175 YQGALQVKSKYPHNVVLIFIKPPSMQELLKRLKKRNDEDETTIKKRLEQAKIEFQQ 230 >gi|226357196|ref|YP_002786936.1| deoxyadenosine kinase [Deinococcus deserti VCD115] Length = 200 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/152 (22%), Positives = 54/152 (35%), Gaps = 15/152 (9%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G GKT+ L + V P E D + + + Sbjct: 2 VEGPIGVGKTSLAGRLAARYGAELNLEIVEENPFLARFYEQ---------PDAYSFQVQV 52 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISV 125 F +R + + +P L G ++ D +L D +A +D+ HL+ D +S Sbjct: 53 F-FLLSRFKQLSALSQPGLFSGN-VVSD-YLFDKDFIFAAMNLKDAEFHLYEDLYAHLSP 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + PD I L D L+R+ R E Sbjct: 110 RLPTPDLVIYLRADTDELLRRIARRGRPFERD 141 >gi|225706560|gb|ACO09126.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial precursor [Osmerus mordax] Length = 355 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 30/223 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTRE----PGGTPAAEAARHV 53 IS +G +GK+ L L +Y +T E P + + Sbjct: 58 KIISIDGNLASGKSALAQKLADKLGMLYMPEPDTHYLDKMTEEKVSLPSRFNGSCSLEKF 117 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QG 107 L + + RL N + + G+ ++ +R S + QG Sbjct: 118 YLDPKASDGNSYRLQYWMYIMRLLQYSNALEHLITTGQGVVLERSPFSDMVFVEAMFKQG 177 Query: 108 ERDSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + ++ IS+ + + P I +D P + K+++ + Y + Sbjct: 178 YIRKQCVEHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKQ-------SGKSYLQNVP 230 Query: 167 VMIHEKRRQIFLD--IARN-QPDRCHIVDSA--HSFQSVATNI 204 + + + + + + D+ + VA +I Sbjct: 231 LAYLKSIEDAYKKTFLPKMSESAELLAYDTTQIQDIERVAEDI 273 >gi|224144020|ref|XP_002325159.1| predicted protein [Populus trichocarpa] gi|222866593|gb|EEF03724.1| predicted protein [Populus trichocarpa] Length = 520 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 69/228 (30%), Gaps = 51/228 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T L+ + + D+ T A+ + + Sbjct: 34 ISGAPASGKGTQCELIVKKFGLVHISTGDLLRAEVSAETEIGNKAKEFM---NAGRLVPD 90 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 ARL + + L++G R S+Q L+ L Sbjct: 91 EIVTAMVTARLSLEDAKEKGWLLDGY----------------PRSSAQAESLEKLN---- 130 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171 V PD ++LD+P +I + R R E+ + + E Sbjct: 131 --VRPDIYVVLDVPDEILIDRCVGRRLDPETGKIYHVKNFPPETEEMKARLITRPDDTEE 188 Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVATNILNIVWEL 211 K + LDI + + +D S + V I +++ ++ Sbjct: 189 KVKAR-LDIYKKNAEAILSTYSNIMVKLDGNRSKEVVFKEIDSLLSQV 235 >gi|38346873|emb|CAE04607.2| OSJNBb0004G23.5 [Oryza sativa Japonica Group] Length = 240 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 69/213 (32%), Gaps = 41/213 (19%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+F G G+GK T + + H++ R ++L+ + Sbjct: 60 FIAFVLGGPGSGKGTQCVRIASDF---GF-AHLSAGDLLRSEISTGRELILNIIKEGKIV 115 Query: 65 EAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +E +IR A+ + K +L D F R + + + Sbjct: 116 PSEI----------TVELIRKAMESSDAKRVLIDGF---------PRCEENRIAFERIT- 155 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RRQIFL 178 PD I D P D +KR+ R R ++ +K + + E + Sbjct: 156 ----GTEPDLVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPVVDYYT 210 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + H +++ + + + + + L Sbjct: 211 SR-----GKVHKINATGTEEEIFGAVHKLFSSL 238 >gi|307199725|gb|EFN80204.1| Deoxynucleoside kinase [Harpegnathos saltator] Length = 249 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 71/213 (33%), Gaps = 35/213 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + EG G+GKTT +S K+F +V V EP + ++L + Sbjct: 15 VCIEGNIGSGKTTFLSYFKKF-----DNVTVLEEPVELWRDVSGTNLL---ELMYKDPTR 66 Query: 67 EAIVFAAA---RLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLDSL 120 A +F + + + + P+ + + +R + S+ + + + + L Sbjct: 67 YAYLFQSYVQLTMLQLHTCMTPSPFK----IMERSVYSAMCFVENLKRNNLLSNTEVSIL 122 Query: 121 QEISVQE-----VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +E + D + L +I +R++ R E+ + ++ Q Sbjct: 123 EEWYNWSMKSAKIETDLIVYLKTTPEIVYERMKKRGRKEENTV-------SLEYLKQIHQ 175 Query: 176 -----IFLDIARNQPDRCHIVDSAHSFQSVATN 203 ++ + P ++ + Sbjct: 176 LHDEWLYHQTLKPVPAPIITINGDRELHEMVEE 208 >gi|281207184|gb|EFA81367.1| deoxyadenosine kinase [Polysphondylium pallidum PN500] Length = 390 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 69/222 (31%), Gaps = 39/222 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ G GKTT + L + L + G F + Sbjct: 23 IGISGLIGVGKTTLCTALGKVLN-------LPTYYEGVIDNAYLEDFYKDPKKYSFPLQI 75 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHL--------F 116 + R + +I +GK + DR + DS +A + Sbjct: 76 YLLN---QRFQQQQLIIW----QGKGGVQDRTIYEDSVFAKMLMESGNMEKRDYETYCSM 128 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQ 175 +L +P+ + LD+ L R++ R E LDY D E + Sbjct: 129 FRNLSNFMR---IPNLIVHLDVSPQESLNRIRLRNRDCEKGITLDYLVALDRAYQEFLQD 185 Query: 176 I--FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 I ++ + R D+ + +A I E ++ R Sbjct: 186 ISKYIAVIRVNWGEYK--DA----EELAAEIKK---EYLKMR 218 >gi|325126635|gb|ADY85965.1| Deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 232 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 49/231 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ ++L ++L G P E+ +L + Sbjct: 4 IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 + +F H I+ AL + +L DR + DS + + G + + D Sbjct: 51 TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYD 106 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 L E ++E+ PD + +++ + + R+Q R E D E ++ Sbjct: 107 ELLESMMKELERMPKRHPDLLVHINVSYETMISRIQKRGRSYEQLSFDPTLE----DYYK 162 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + + + + P ++D H V I + ++ Sbjct: 163 RMLRYYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211 >gi|317486953|ref|ZP_07945763.1| phosphonate metabolism protein/1,5-bisphosphokinase PhnN [Bilophila wadsworthia 3_1_6] gi|316921828|gb|EFV43104.1| phosphonate metabolism protein/1,5-bisphosphokinase PhnN [Bilophila wadsworthia 3_1_6] Length = 190 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 42/221 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGV 59 M G + G G+GK + + L+ L + V R P A+ RH+ +S Sbjct: 1 MRQGQLVYVMGASGSGKDSLLQALRPRL--RGVPVAFARRYITRPLSAKGERHIAVSP-- 56 Query: 60 DEFGAEAEAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + F A A + F H + + L G ++L + S+ Sbjct: 57 ERFAAMAASGEFMMDWRSHGLRYGIGKGVETTLAHGGVVLM--------------NGSRE 102 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++L+ ++P +++++ + R+ R + R + Sbjct: 103 YLPEALRRF--PSLVP---VLVEVDASVLRARLLARGREPGGDIEERIARASMP------ 151 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 PD +D++ +V L++++ Sbjct: 152 -------AEYPDGVLRIDNSGELAESTAAFYRMVARLIEEK 185 >gi|145341046|ref|XP_001415627.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144575850|gb|ABO93919.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 210 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 41/201 (20%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + + R L D+ G+ ++ + Sbjct: 34 GGPGAGKGTQCANIVRDYAFVHLSAG--DLLRAHMKSGSKDGNMVAEMIKQGQIVP-SEV 90 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 ++ A R GK DRFL + E D+ + + Sbjct: 91 TVNLLLEAMRA------------SGK----DRFLIDGFPRNKENR-------DAWETTAG 127 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182 + D + D P ++ +R+ R R +D +++ E + + Sbjct: 128 FDC--DFVLFFDCPEEVMTERLLGRNEGRTDDNIDTIKKRFKTFRESSMPVINYYDSL-- 183 Query: 183 NQPDRCHIVDSAHSFQSVATN 203 ++ V+S S + V Sbjct: 184 ---NKVCSVNSDQSPEDVYAQ 201 >gi|242398400|ref|YP_002993824.1| Signal recognition particle GTPase [Thermococcus sibiricus MM 739] gi|242264793|gb|ACS89475.1| Signal recognition particle GTPase [Thermococcus sibiricus MM 739] Length = 300 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G GKTT I+ L +L++ V + T A A V G + Sbjct: 107 IVFVGFNGGGKTTTIAKLANWLKKNGLSVVIAA--SDTFRAGAIEQV--EEHAKRVGVKV 162 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + I A G ++L D R+ +D +++I+ Sbjct: 163 IKHGYKSDPAAVAYDSIEHAKARGIDVVLVD---------TAGRNELNRNLMDEMKKIA- 212 Query: 126 QEVMPDCTII 135 + PD I Sbjct: 213 RVTKPDLVIF 222 >gi|281426113|ref|ZP_06257026.1| hypothetical protein HMPREF0971_03097 [Prevotella oris F0302] gi|281399689|gb|EFB30520.1| hypothetical protein HMPREF0971_03097 [Prevotella oris F0302] Length = 361 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 6/108 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I G AGKTT + + Y V E + ++ + + Sbjct: 1 MKTVKKIVLTGGPCAGKTTALVKVIEHFSSLGYKVFTIPEVPTMFSQSGMDYLTTNKKLF 60 Query: 61 EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A E + + + E +++CDR AY Sbjct: 61 YEGEKATLEVQLALEDKFQRMAE----QCEEPAVIICDRGAMDISAYM 104 >gi|125541347|gb|EAY87742.1| hypothetical protein OsI_09157 [Oryza sativa Indica Group] Length = 222 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/213 (12%), Positives = 60/213 (28%), Gaps = 47/213 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 34 GGPGSGKGTQCANIVEHF---GF--------IHLSAGDLLRAEIKSGSENG--------- 73 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125 +I + EGKI+ + + + +D + Sbjct: 74 ----------TMIENMIKEGKIVPSE-VTIKLLQEAMIKSGNDKFLIDGFPRNEENRAAF 122 Query: 126 QE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179 + + P + D + +R+ R R ++ ++ + E + + Sbjct: 123 ENVTKITPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYY-- 180 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 N D+ +D+A V ++ I V Sbjct: 181 ---NAKDKVKKIDAAKPIPEVFEDVKAIFAPYV 210 >gi|239789009|dbj|BAH71154.1| ACYPI006573 [Acyrthosiphon pisum] gi|239789011|dbj|BAH71155.1| ACYPI006573 [Acyrthosiphon pisum] Length = 151 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 10/97 (10%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDI-ARNQPDRC 188 D I L +I +R++ R E L+Y + +HE +L++ + P Sbjct: 25 DLIIYLRTDPEIAYQRIKTRNRSEEKNISLEYIQH----LHE-LHDKWLNVHITDVPKNI 79 Query: 189 --HIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 IVD+ S V + +L+ K S L K Sbjct: 80 PVVIVDANQSMDLVRKQ-FKGIRDLITKNASALGKLK 115 >gi|212374986|pdb|3DMD|B Chain B, Structures And Conformations In Solution Of The Signal Recognition Particle Receptor From The Archaeon Pyrococcus Furiosus gi|212374987|pdb|3DMD|A Chain A, Structures And Conformations In Solution Of The Signal Recognition Particle Receptor From The Archaeon Pyrococcus Furiosus gi|212374988|pdb|3DMD|C Chain C, Structures And Conformations In Solution Of The Signal Recognition Particle Receptor From The Archaeon Pyrococcus Furiosus gi|213424254|pdb|3E70|C Chain C, Structures And Conformations In Solution Of The Signal Recognition Particle Receptor From The Archaeon Pyrococcus Furiosus Length = 328 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 18/132 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+ G G+GKTT I+ L +L+ + V + T A A L G Sbjct: 133 MFV---GFNGSGKTTTIAKLANWLKNHGFSVVIAA--SDTFRAGAIEQ--LEEHAKRIGV 185 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + A + I+ A G ++L D R + +D +++I Sbjct: 186 KVIKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKI 236 Query: 124 SVQEVMPDCTII 135 + + P+ I Sbjct: 237 A-RVTKPNLVIF 247 >gi|219850610|ref|YP_002465043.1| adenylate kinase [Chloroflexus aggregans DSM 9485] gi|219544869|gb|ACL26607.1| adenylate kinase [Chloroflexus aggregans DSM 9485] Length = 222 Score = 47.7 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 46/250 (18%), Positives = 72/250 (28%), Gaps = 71/250 (28%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVL 54 M G I G GAGKTT +LL + V T + +P +L Sbjct: 1 MTVGKTILLIGPPGAGKTTIANLLAQ---ETGIAVIATGQLLRTEIRAQSPIGRQIAALL 57 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + AE + ARL I P+ L D + S A D+ Sbjct: 58 EQGQLVPDAVMAELM---RARLQ----TILPSQS----CLLDGYPRS-IAQAQMLDTMLA 105 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH---- 170 + I+LDL + R+ R R D V +H Sbjct: 106 ELRRQVN----------VVIVLDLSETAIMHRLGGRRVCRSPDGRD------VTLHIDDT 149 Query: 171 EKRRQIFLD---IARNQPDR---------------------------CHIVDSAHSFQSV 200 E+ Q +++ DR H +++ S + V Sbjct: 150 EQVAQCLAKGGVLSQRDDDRPEVIRARLRLYEQETTPVLDFYRHRGLVHHINADQSPEMV 209 Query: 201 ATNILNIVWE 210 I ++ + Sbjct: 210 VAAINQVLQD 219 >gi|71896367|ref|NP_001025532.1| deoxycytidine kinase, gene 1 [Xenopus (Silurana) tropicalis] gi|60649673|gb|AAH90567.1| dck protein [Xenopus (Silurana) tropicalis] Length = 265 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 85/242 (35%), Gaps = 41/242 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ ++++V + R + + L Sbjct: 26 ISIEGNIAAGKSTFVNILKKA--NEDWEVVPEPIARWCNIQSCKDEFEELTTSQKSGGNL 83 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R ++ P L + + DR++ +S Sbjct: 84 LQMMYEKPERWSFTFQSYACLSRIRAQLKALGGKLKEAENPVLFFERSVYSDRYIFASNL 143 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + ++ D I L + L R+ +R E Sbjct: 144 YEAECMNETEWTVYQDWHDWMNSQFGADLELDGIIYLRAIPEKCLNRIYSRGREEEQGIP 203 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV---ATNILNIVWE 210 ++Y E+ + + H R F + + P +D F+ +++ V E Sbjct: 204 MEYLEKLHYKHESWLHHRTMRTDFEYL-QEIP--ILTLDVNEDFKDNKQKQESLIEKVKE 260 Query: 211 LV 212 + Sbjct: 261 FL 262 >gi|281347674|gb|EFB23258.1| hypothetical protein PANDA_008200 [Ailuropoda melanoleuca] Length = 253 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 69/187 (36%), Gaps = 32/187 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGT--PAAEA 49 I+ EG +GKTT +++LK+ + ++V E + Sbjct: 24 IAIEGNIASGKTTFVNILKQVCED--WEVVPEPVARWCNVQNAQGDCEELTTSQESGGNV 81 Query: 50 ARHVLLSCGVDEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSY 103 + + F ++ A + + R +++ +P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQSYACL-SRIRAQLACLDGKLKDAEKPVLFFERSIYSDRYVFASN 140 Query: 104 AYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157 Y+ E + + D + + Q ++ D I L + L R+ R E Sbjct: 141 LYESECMNETEWTIYQDWHDWMNQQFGQSLVLDGIIYLRATPEKCLNRIYLRGRNEEQGI 200 Query: 158 CLDYFER 164 L+Y E+ Sbjct: 201 PLEYLEK 207 >gi|150383504|sp|Q7ZX23|KCY_XENLA RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK Length = 193 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 61/217 (28%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A + R Sbjct: 10 GGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----------- 47 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + +GKI+ L R ++ + A+ + D+ Sbjct: 48 -------QYGELIESYIRDGKIVPVEITISLLQRAMERTMAFDANKHKFLIDGFPRNEDN 100 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ D + D + ++R R + + + + EKR Q Sbjct: 101 LQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL---EKRIQT 154 Query: 177 FLD----IARNQPDR--CHIVDSAHSFQSVATNILNI 207 +L I R VD++ S V T + NI Sbjct: 155 YLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNI 191 >gi|315230336|ref|YP_004070772.1| AMP/CMP kinase [Thermococcus barophilus MP] gi|315183364|gb|ADT83549.1| AMP/CMP kinase [Thermococcus barophilus MP] Length = 180 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 46/224 (20%), Positives = 73/224 (32%), Gaps = 75/224 (33%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 + I+ G G GKTT LL L Y V + + G E DE Sbjct: 1 MIIAVSGTPGVGKTTVAKLLAEKL---GYMYVDLKKFAIGHEIGEI--------KGDELE 49 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E + + + I L +GK ++ D Sbjct: 50 VEIDELAYF----------IEKEL-KGKNVVLDGH------------------------- 73 Query: 124 SVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------KDVMIHEKRR 174 + +MP D IIL L I +R++ R RE + E + + HE Sbjct: 74 -LSHLMPADQVIILRLHPKIIGERLKERGYSREKISEN-VEAELVDVCLVEAIDTHENVI 131 Query: 175 QIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + VD+ + + V IL+++ + V+KRV Sbjct: 132 E---------------VDTTGKTPEQVVEEILDLLNKGVKKRVG 160 >gi|268370128|ref|NP_001161245.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial precursor [Nasonia vitripennis] Length = 420 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 83/233 (35%), Gaps = 38/233 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-----TPAAEAARHV--LLSC 57 I +G +GK+ L + L ++ +D +P T R + LL Sbjct: 80 KLIVIDGQVASGKS----KLAQELAKE-FDFLYLPQPTFDDLLITKWGFDVRQLDHLLPK 134 Query: 58 GVDEFGAE------------AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY 103 + E A + R + + G+ ++ R + D+ + Sbjct: 135 DAQSWDIERFLQNPHDRNTIAMQLYMYMMRQKQYIDSLAHIFCTGQGVVTVRSPWSDAVF 194 Query: 104 A---YQGERDSSQHLFL--DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 A YQ + S + D+ + + P I LD+PVD+ L+ ++ R E Sbjct: 195 AKAMYQSKFISPKGYEAHTDACKASLHNYLKPHVIIYLDVPVDLTLQNIKKRGLPHEVNS 254 Query: 159 LDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV--DSAH--SFQSVATNILNI 207 E+ I E ++ +L + CH++ D + + V ++ N+ Sbjct: 255 KVLNEKYLSDIEENYKRDYL---AKLTENCHLLIYDWSQGGDIEVVVEDLENL 304 >gi|331703389|ref|YP_004400076.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256383796|gb|ACU78366.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|256384626|gb|ACU79195.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455973|gb|ADH22208.1| deoxyguanosine kinase [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328801944|emb|CBW54098.1| Deoxyguanosine kinase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 205 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 33/217 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK+T + + + L + + V P + + + + A + Sbjct: 3 IAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 62 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + ++EN+I L+E I F+ +Y + + ++D + + Sbjct: 63 KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQTDYNTYIDFYNNVVL 113 Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + P D I L + + R++ R E E + + Sbjct: 114 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLI-------GEEYWETLNKNYE 166 Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + P +VD+ V T I I+ +L Sbjct: 167 EFYKQNVYDFP--FFVVDAELD---VKTQIELIMNKL 198 >gi|223974159|gb|ACN31267.1| unknown [Zea mays] Length = 244 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 48/218 (22%) Query: 6 FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 FI+F G G+GK T + + L + H G+ E ++ + Sbjct: 61 FIAFVLGGPGSGKGTQCTKIASDFGFAHLSAGDILRHEIA--SGSEKGELILEIIKEGRI 118 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +IR A+ K +L D F Sbjct: 119 VP--------------SEITVELIRKAMEMNNAKRVLIDGFPRC------------EENR 152 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173 + + I PD I D P D +KR+ R R ++ +K + + E Sbjct: 153 IAFERIV--GTEPDIVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 209 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + H +++ + + + + L Sbjct: 210 VDYYSSR-----GKVHKINATGTADEIFEAVRRLFSSL 242 >gi|255557953|ref|XP_002520005.1| Thermosensitive gluconokinase, putative [Ricinus communis] gi|223540769|gb|EEF42329.1| Thermosensitive gluconokinase, putative [Ricinus communis] Length = 186 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 49/213 (23%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G+ GAGK+T +L + L+ K D +++ R C Sbjct: 6 QGKAIVIMGVSGAGKSTIGEMLAKDLKCKFLDA-------DDFHSQSNRE--KMCQGIPL 56 Query: 63 GAEAEAIVFAAAR---LDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQ 113 E R L ++ +R +L+ GKI++ +R+ + R + Sbjct: 57 SEE--------DRIPWLQSLQEAVRESLIVGKIVILGCSSLQNRY------REILRSADP 102 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L S + ++LD+ ++ R+ R + + + + + Sbjct: 103 NYQLGSYVSVVKF-------VLLDVNAEVLAARLNKRAAEGKHFMPATLLQSQLDL---- 151 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + + + + VD+A S +++ I + Sbjct: 152 ------LHVDDSEGIYKVDAAQSPRAIVDAIKS 178 >gi|104774799|ref|YP_619779.1| deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116514928|ref|YP_813834.1| deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103423880|emb|CAI98921.1| Deoxyguanosine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116094243|gb|ABJ59396.1| Deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 232 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 49/231 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ ++L ++L G P E+ +L + Sbjct: 4 IVLSGPVGAGKSSLTAILSKYL-------------GTKPFYESVDDNPVLPLFYKDPLKY 50 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLD 118 + +F H I+ AL + +L DR + DS + + G + + + Sbjct: 51 TYLLQLFFLNTRFH---SIKKALSDDNNVL-DRSIYEDSLFFHMNADIGRANDLEVQTYE 106 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 L E ++E+ PD + +++ + ++R+Q R E D E ++ Sbjct: 107 ELLENMMKELERMPKRHPDLLVHINVSYETMIRRIQKRGRSYEQLSFDPTLE----DYYK 162 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + + + + P ++D H V I + ++ Sbjct: 163 RMLRYYEKWYDDYDYSPK--MMIDGDHYDFMASESDRTEVLDQITQKLKQV 211 >gi|323524825|ref|YP_004226978.1| deoxynucleoside kinase [Burkholderia sp. CCGE1001] gi|323381827|gb|ADX53918.1| deoxynucleoside kinase [Burkholderia sp. CCGE1001] Length = 226 Score = 47.3 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G GKT+ L + + + P P E A+ Sbjct: 19 YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPQDNPFLE---RFYRDTARYALPAQ 71 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + FA R + V A + G L+ D F+ + +A ++ +L+ Sbjct: 72 ---LHFALQRAQQAQEV-SAAQVAGTPLIAD-FMTQKNDIFARLTLQEDEWNLYRALAAR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFSRIQKRAVPMELQISDAY 166 >gi|28493501|ref|NP_787662.1| adenylate kinase [Tropheryma whipplei str. Twist] gi|28572386|ref|NP_789166.1| adenylate kinase [Tropheryma whipplei TW08/27] gi|46396109|sp|Q83G05|KAD_TROWT RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|46396110|sp|Q83I60|KAD_TROW8 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|28410517|emb|CAD66903.1| adenylate kinase [Tropheryma whipplei TW08/27] gi|28476543|gb|AAO44631.1| adenylate kinase [Tropheryma whipplei str. Twist] Length = 186 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 69/206 (33%), Gaps = 41/206 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT--REPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G G+GK T L++ L V T A R ++ S G Sbjct: 7 GPPGSGKGTQCGLIQSRL---GISVIATGDVFRERMKTDMALRDIVSSGGYVSDSTT--- 60 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ-E 127 ++ L + + S + G + Q LD L+ + Sbjct: 61 -----------NRIVEDCLDKEDV-------SSGFVLDGYPRTLQQ--LDFLEGFLKRRA 100 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI------A 181 + D L++ D+ ++R++ R S D + +R +I+ ++ A Sbjct: 101 LTLDAVFSLEVATDLLIERLRAR-SKESGRTDDR-----DSVIARRLEIYTEMTLPIIDA 154 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207 + H +D++ + V +I ++ Sbjct: 155 CEEKGLLHRIDASKGIEEVFQSIKDV 180 >gi|213963508|ref|ZP_03391761.1| protein containing hppk and dnk domain protein [Capnocytophaga sputigena Capno] gi|213953788|gb|EEB65117.1| protein containing hppk and dnk domain protein [Capnocytophaga sputigena Capno] Length = 375 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 21/183 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG G+GKTT + + K + P E + E Sbjct: 179 KYIAIEGNIGSGKTTLATKIAEDFNAKLILEQFSDNPFLPKFYENPKQY---GFTLEMSF 235 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122 E R + + + + ++ D + S + + L Sbjct: 236 LTE-------RYQQMREQLAQTDLFKEFVVSDYDIFKSLIFSKVTLTDDEFMLYRKLFYI 288 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181 + Q + PD + L D ++ ++ R E DY +K +LD Sbjct: 289 LYSQIIKPDLYVFLYQNTDRLIENIKKRGREYEQNISPDYL--------KKIHYGYLDFI 340 Query: 182 RNQ 184 + Sbjct: 341 QKN 343 >gi|126031079|pdb|2JAS|A Chain A, Structure Of Deoxyadenosine Kinase From M.Mycoides With Bound Datp gi|126031080|pdb|2JAS|B Chain B, Structure Of Deoxyadenosine Kinase From M.Mycoides With Bound Datp gi|126031081|pdb|2JAS|C Chain C, Structure Of Deoxyadenosine Kinase From M.Mycoides With Bound Datp gi|126031082|pdb|2JAS|D Chain D, Structure Of Deoxyadenosine Kinase From M.Mycoides With Bound Datp gi|126031083|pdb|2JAS|E Chain E, Structure Of Deoxyadenosine Kinase From M.Mycoides With Bound Datp gi|126031084|pdb|2JAS|F Chain F, Structure Of Deoxyadenosine Kinase From M.Mycoides With Bound Datp Length = 206 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 33/217 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK+T + + + L + + V P + + + + A + Sbjct: 4 IAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 63 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + ++EN+I L+E I F+ +Y + + ++D + + Sbjct: 64 KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQTDYNTYIDFYNNVVL 114 Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + P D I L + + R++ R E E + + Sbjct: 115 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLI-------GEEYWETLNKNYE 167 Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + P +VD+ V T I I+ +L Sbjct: 168 EFYKQNVYDFP--FFVVDAELD---VKTQIELIMNKL 199 >gi|260795047|ref|XP_002592518.1| hypothetical protein BRAFLDRAFT_118931 [Branchiostoma floridae] gi|229277738|gb|EEN48529.1| hypothetical protein BRAFLDRAFT_118931 [Branchiostoma floridae] Length = 481 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 25/238 (10%), Positives = 66/238 (27%), Gaps = 60/238 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK+ SL+ + + Sbjct: 271 IVLLGPTGAGKSVQASLIANK-----------YNITNLSCGALIKEAIADETK------- 312 Query: 67 EAIVFAAARLDHVENVIRPALMEGKIL--------LCDR-FLDSSYAYQGERDSSQHLFL 117 + I+P + G ++ L DR + + Sbjct: 313 ------------IGEAIKPYVERGMMVPDNLVMKVLSDRLSRLDAVSRGWVMHGFPRT-R 359 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYFE 163 + + + + P+ LD+P D ++R+ R + R + Sbjct: 360 EQAESLKDANLDPNRVFFLDIPNDSVMERLVLRRTDPVTGERYHFLYNPPRTNEVKARLH 419 Query: 164 R----KDVMIHEKR--RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + ++ + ++ + + + + +++ +V I +++ + K+ Sbjct: 420 QHPKDEEEAVKKRLIEYHAYAEEIADFYEAAMRINADQDPHTVFEFIESMIVNPLPKK 477 >gi|62122895|ref|NP_001014374.1| deoxycytidine kinase [Danio rerio] gi|61403525|gb|AAH91889.1| Zgc:110540 [Danio rerio] gi|182891916|gb|AAI65516.1| Zgc:110540 protein [Danio rerio] Length = 264 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 68/194 (35%), Gaps = 36/194 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----------HVTREPGGTPAAEAAR 51 + +S EG AGK+T + LL+R + ++V T E G + + + Sbjct: 20 KRAMKVSIEGNIAAGKSTFVRLLERASEE--WEVIPEPIGKWCNVQTTENGYEELSTSQK 77 Query: 52 H--VLLSCGVDEFGAEAEAIVFAA-------------ARLDHVENVIRPALMEGKILLCD 96 LL D+ + A A+L E ++ + D Sbjct: 78 SGGNLLQMLYDKPSRWSYTFQTYACLSRVRSQLQPPSAKLQQAEKPVQFFERS---VYSD 134 Query: 97 RFLDSSYAYQGERDSSQHLFL--DSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRY 151 R++ +S ++ + + D + Q + D I L + ++R+Q R Sbjct: 135 RYVFASNLFESGDLNETEWAIYQDWHSWLLTQFESQIELDAMIYLRADPERCMQRLQFRG 194 Query: 152 SLRESA-CLDYFER 164 E LDY E+ Sbjct: 195 REEEQGIPLDYLEK 208 >gi|15674338|ref|NP_268512.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I) subunit [Streptococcus pyogenes M1 GAS] gi|71909917|ref|YP_281467.1| deoxyadenosine kinase/deoxyguanosine kinase [Streptococcus pyogenes MGAS5005] gi|13621423|gb|AAK33233.1| putative deoxyguanosine kinase/deoxyadenosine kinase(I) subunit [Streptococcus pyogenes M1 GAS] gi|71852699|gb|AAZ50722.1| deoxyadenosine kinase/deoxyguanosine kinase [Streptococcus pyogenes MGAS5005] gi|126238224|gb|ABO07416.1| deoxyadenosine kinase [Streptococcus pyogenes] Length = 213 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 70/231 (30%), Gaps = 45/231 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK++ + L L DV P + Sbjct: 1 MLIVLAGTIGAGKSSLAAALGEHL---GTDVFY-EAVDNNPVLDLYYQ----------DP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-----------DSSQ 113 + A + L+ I+ A +L DR + + D Q Sbjct: 47 KKYAFLLQIYFLNKRFKSIKEAYQADNNIL-DRSIFEDELFLKLNYKNGNVTKTELDIYQ 105 Query: 114 HLFLDSLQEIS-VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + L+E+ + + PD I +D+ D L+R++ R E + E+ + Sbjct: 106 ELLANMLEELEGMPKKRPDLLIYIDVSFDKMLERIERRGRSFEQVDGNPSLEQ----YYH 161 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSA--------HSFQSVATNILNIVWEL 211 + + + P +D +V I + EL Sbjct: 162 QVHGEYPTWYEDYEVSPK--MKIDGNSLDFVQNPQDLATVLKMIDTKLKEL 210 >gi|226491249|ref|NP_001149421.1| LOC100283047 [Zea mays] gi|195627122|gb|ACG35391.1| adenylate kinase [Zea mays] Length = 245 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 48/218 (22%) Query: 6 FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 FI+F G G+GK T + + L + H G+ E ++ + Sbjct: 62 FIAFVLGGPGSGKGTQCTKIASDFGFAHLSAGDILRHEIA--SGSEKGELILEIIKEGRI 119 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +IR A+ K +L D F Sbjct: 120 VP--------------SEITVELIRKAMEMNNAKRVLIDGFPRC------------EENR 153 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----R 173 + + I PD I D P D +KR+ R R ++ +K + + E Sbjct: 154 IAFERIV--GTEPDIVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLNIPV 210 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + H +++ + + + + L Sbjct: 211 VDYYSSR-----GKVHKINATGTADEIFEAVRRLFSSL 243 >gi|289743077|gb|ADD20286.1| mitochondrial thymidine kinase 2/deoxyguanosine kinase [Glossina morsitans morsitans] Length = 249 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 27/204 (13%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66 EG G+GKTT ++ ++ V + EP ++L + +++ Sbjct: 25 IEGNIGSGKTTFLN----HFKQFEDQVCLITEPVDKWRNLHEFNLLSLMYSQPEKWAMPF 80 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-----LQ 121 ++ V H +P + L +R L SS Y + + ++ LQ Sbjct: 81 QSYVNLTMLQSHTMKTDKP------VKLMERSLYSS-KYCFVENLYKSKLMEPAMYHILQ 133 Query: 122 EISVQ-----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 E + D + L DI KR+Q R E + ++ +HE I Sbjct: 134 EWYKFIEESIHIRADLIVYLRTSPDIVYKRIQKRARSEECNISLKYLQELHDLHE----I 189 Query: 177 FLDIARNQPDRCHIVDSAHSFQSV 200 +L + + ++++ + + Sbjct: 190 WLMANQGYNSKVIVLNADLDLEQI 213 >gi|86159533|ref|YP_466318.1| ABC transporter, ATPase subunit [Anaeromyxobacter dehalogenans 2CP-C] gi|85776044|gb|ABC82881.1| ABC transporter, ATPase subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 310 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 48/245 (19%), Positives = 69/245 (28%), Gaps = 58/245 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF--GAEAE 67 G +GAGKTT I L L + R G P + A R L L E Sbjct: 47 GPDGAGKTTAIRALAGLLALDGGEA---RVLGADPLSGANRERLGLMPQQYSLYRDLTVE 103 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLC--DRFLD------SSYAY-------------- 105 + ARL + + E + + DRF D S Y Sbjct: 104 ENLHFFARLYVLPRAVYRERKERLLAITRLDRFTDRRADALSGGMYKKLALACALLHEPE 163 Query: 106 --------QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP--------VDIGL-KRVQ 148 G S+ L E T+++ P + L R + Sbjct: 164 VLLLDEPTNGVDPVSRRELWALLHEFVHGG----MTVLVSTPYMDEAERCSRVALVHRGR 219 Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP---------DRCHIVDSAHSFQS 199 A +D FE + +H R+ P R +V + + Sbjct: 220 ALLDGEPGALIDEFEDEAYEVHGGNRERLDAALAAHPAVLAASPAGARLKVVVARGARDE 279 Query: 200 VATNI 204 VA I Sbjct: 280 VARAI 284 >gi|217977941|ref|YP_002362088.1| sulfate adenylyltransferase, large subunit [Methylocella silvestris BL2] gi|217503317|gb|ACK50726.1| sulfate adenylyltransferase, large subunit [Methylocella silvestris BL2] Length = 647 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 47/209 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +L++ +L R +LL G Sbjct: 468 FTGLSGSGKSTISNLVESWLYAHG-----------------MRTILLDGDNIRHGLNKNL 510 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++++ V + G I+LC S + LD + + Sbjct: 511 GFTEVDRVENIRRVGEVAKLMTDAGLIVLC-----SFISPFNAERQLVRDLLDDGEFLE- 564 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 I +D P++ + R + A ++ Q + A P Sbjct: 565 --------IFVDTPIEDCIARDPKGLYKKALAG-------EIKNFTGVDQRYE--APQNP 607 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQK 214 + D + Q A I V EL+++ Sbjct: 608 EMIVARDG-QTPQQAAAAI---VKELIRR 632 >gi|290968489|ref|ZP_06560028.1| guanylate kinase [Megasphaera genomosp. type_1 str. 28L] gi|290781485|gb|EFD94074.1| guanylate kinase [Megasphaera genomosp. type_1 str. 28L] Length = 205 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 26/173 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SGL I G GAGK T L+ + +Y + +T P E + E Sbjct: 4 SGLLIVVSGPSGAGKGTICDALRARFPQVHYSISMTTRPPRPGEKEGVNYYFTDTAHFEA 63 Query: 63 GAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +A + A DH + + AL G+ +L + +D A Q + Q Sbjct: 64 LLAQDAFLEHAKVYDHYYGTPKQYVYDALARGEHVLLE--IDIQGAMQVRKHYPQC---- 117 Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + +P + R+ R++ E ++ + Sbjct: 118 -------------LCVYI-VPPNRQVLAARLHGRHTDSEEVIAGRLQKTQAEL 156 >gi|170591931|ref|XP_001900723.1| Deoxynucleoside kinase family protein [Brugia malayi] gi|158591875|gb|EDP30478.1| Deoxynucleoside kinase family protein [Brugia malayi] Length = 440 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 26/180 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---------- 54 I EG G+ K+ L L E R+ Sbjct: 78 KLIVVEGNIGSNKSDMACSLADRLGFHFIPEFQMDEVLVDRFGNDYRNYYHLFPKSFRLF 137 Query: 55 ------LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 G DE + I+ + D N I + G+ ++ +R + + + Sbjct: 138 DMNMFYKDPGNDETAKMRDRIL--RCKFDQYLNAIAHIMNTGQGVVLERTPHTDFIFANA 195 Query: 109 RDSSQHL--------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + ++ +++ I P I LD+PVD L+ + + + + A +D Sbjct: 196 CRAKNYIGPEYFTYYYIERKNMIPNCRFWPHLVIYLDVPVDKCLQNIYQQGNADKIAIID 255 >gi|325964702|ref|YP_004242608.1| adenylate kinase [Arthrobacter phenanthrenivorans Sphe3] gi|323470789|gb|ADX74474.1| Adenylate kinase [Arthrobacter phenanthrenivorans Sphe3] Length = 225 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 41/216 (18%), Positives = 72/216 (33%), Gaps = 37/216 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSCGVDEFGAE 65 G G+GK T L R T E + +E L G Sbjct: 36 GPPGSGKGTQAEQLARHF---GIPAVSTGEIFRSNVSEETELGNQAASYLDGGDFVPDHL 92 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A+V + ++ L EG L D + R + Q LD++ ++ Sbjct: 93 TNALV--------RDRLVDSDLQEGF--LLDGY---------PRTAPQVQELDTM--LAN 131 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 Q D I L P + +R++ R R +D F R+ + H + + + Sbjct: 132 QGFALDAVIELHAPDAVLEQRMRRRAADQGRSDDTVDVFRRRLDLYHRETHE----VVSV 187 Query: 184 QPDR-CHI-VDSAHSFQSVATNILNIVWELVQKRVS 217 R + VD + + + V + ++ R+S Sbjct: 188 YAGRGILVSVDGSGEPGDITGAAITAVEKFLRGRLS 223 >gi|161622541|ref|YP_001595169.1| hypothetical protein EpJS98_gp040 [Enterobacteria phage JS98] gi|238695196|ref|YP_002922389.1| hypothetical protein EpJS10_0040 [Enterobacteria phage JS10] gi|52139861|gb|AAU29232.1| hypothetical protein EpJS98_0040 [Enterobacteria phage JS98] gi|220029332|gb|ACL78266.1| hypothetical protein EpJS10_0040 [Enterobacteria phage JS10] Length = 178 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 27/123 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN I +G + +GK+T I L L K Y + P + + L D Sbjct: 1 MNP-KIIVIDGPDNSGKSTLIKNL---LSNKKYRLI------DFPKKINGKCISLGTDND 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + L + + DR S+ Y G +++ L Sbjct: 51 K----------------ALVETLYKFLDPNFVYILDRGYPSNIVYSGFLRGEMDPYVE-L 93 Query: 121 QEI 123 ++ Sbjct: 94 EDW 96 >gi|83816359|ref|YP_445088.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Salinibacter ruber DSM 13855] gi|83757753|gb|ABC45866.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Salinibacter ruber DSM 13855] Length = 261 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 15/155 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG GAG TT LL + V E P E + + + Sbjct: 56 YVAIEGAIGAGTTTLTELLADRFEAD--PVLERFE--DNPFLERFYE-----DRERWAFQ 106 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + + F A+R + + L + D + D +A Q L+ + Sbjct: 107 TQ-LAFLASRFRQQKELSERDLFRDFAV-SD-YTFDKDRIFARQTLSGDELQLYESLFRL 163 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + PD + L + L+ ++ R E Sbjct: 164 MEPTVPSPDLVVYLRSSPERLLQNIEKRDRPYERD 198 >gi|82702009|ref|YP_411575.1| deoxynucleoside kinase [Nitrosospira multiformis ATCC 25196] gi|82410074|gb|ABB74183.1| Deoxynucleoside kinase [Nitrosospira multiformis ATCC 25196] Length = 213 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 15/154 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ EG G GKT+ + + + P E R L Sbjct: 9 IAVEGPIGVGKTSLARRMAEYAGGQLLLEKPEENPFLGKFYEDIRRYALPTQ-------- 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEI 123 + F R + ++++ + L K + D FL D +A ++ L+ + + Sbjct: 61 --LFFLFQRANQLQDLTQIDLFT-KTTISD-FLLDKDPLFAGLTLNNAEYELYRKIYRHL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + PD I L +RV+ R S E Sbjct: 117 QPEAFTPDLVIYLQASPATLAERVKRRGSSYEKN 150 >gi|2506792|sp|P47353|KGUA_MYCGE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase Length = 240 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 24/176 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 N G G G GK+T + L + + Y + T E + Sbjct: 54 NQGRIFVITGPSGVGKSTLVKALLDHFKEQLFYSISATTRKKRISEKEGIDYFFKDKDEF 113 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + +A + A +H ++ S A Q + L L+ Sbjct: 114 ENLIKQDAFIEWACYNNHYYGTLK-----------------SQAEQAIKSGIN-LMLEIE 155 Query: 121 QEISVQ--EVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + ++Q P +++ + LKR++ R E+ E+ + + Sbjct: 156 YQGALQVKSKYPHNVVLIFIKPPSMQELLKRLKKRNDEDETTIKKRLEQAKIEFQQ 211 >gi|212223269|ref|YP_002306505.1| signal recognition particle protein Srp54 [Thermococcus onnurineus NA1] gi|229558607|sp|B6YSS1|SRP54_THEON RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|212008226|gb|ACJ15608.1| signal recognition particle, SRP54 subunit [Thermococcus onnurineus NA1] Length = 448 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 17/127 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT I+ L R+ Q++ Y V + P A + + ++ G++ FG E Sbjct: 107 GIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + + + +G I++ D R + ++ +++IS + Sbjct: 165 ---KDAIKLAKEGVEHFREKGVDIIIVD---------SAGRHKEEKSLIEEMKQISA-AI 211 Query: 129 MPDCTII 135 P I+ Sbjct: 212 KPHEVIL 218 >gi|322706958|gb|EFY98537.1| uridylate kinase [Metarhizium anisopliae ARSEF 23] Length = 308 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 63/215 (29%), Gaps = 38/215 (17%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + L + L + +E G+ + R + + + Sbjct: 119 GGPGAGKGTQCANLVKQYGFTHLSA-GDLLRAEQERPGSQFGDLIRDYIKNGLIVPMEV- 176 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + +EN + AL RFL + LD + Sbjct: 177 ---------TIQLLENAMTEALQSNGNATKGRFLIDGF----------PRKLDQAHKFE- 216 Query: 126 QEVMPD-CTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLD 179 + V P + D P + +R+ R S R + ++ E + Sbjct: 217 ESVCPARMVLFFDCPEKVMEERLLERGKTSGRADDNAESIRKRFRTFIETSMPVVDYYEK 276 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 A+ +D+ + V N + E K Sbjct: 277 QAK-----VVKIDATPTPDQVFANTKARLTEKFGK 306 >gi|403984|gb|AAB09751.1| deoxyguanosine kinase [Lactobacillus acidophilus] Length = 224 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 80/229 (34%), Gaps = 45/229 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ +L ++L G P E+ +L + + Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYE--NPK 48 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQE 122 A + L+ I+ AL + +L DR + + +Q D + +D+ E Sbjct: 49 KYAFLLQVYFLNTRFRSIKSALTDDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYYE 107 Query: 123 ISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 + + +M PD + +D+ D LKR+Q R E D E ++ Sbjct: 108 L-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DYYK 162 Query: 172 KRRQIFL-DIARNQPDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + + + A+ +D Q V I+ + E+ Sbjct: 163 RLLRYYKPWYAKYDYSPKMTIDGDKLDFMASEEDRQEVLNQIVAKLKEM 211 >gi|55379684|ref|YP_137534.1| signal recognition particle receptor [Haloarcula marismortui ATCC 43049] gi|55232409|gb|AAV47828.1| signal recognition particle receptor [Haloarcula marismortui ATCC 43049] Length = 429 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 17/155 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L ++ + + + G T A A L + + Sbjct: 236 IVFTGVNGVGKTTSIAKLAQYFEDRGLSTVLA--NGDTYRAGANEQ--LEKHAENLDKKI 291 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + V + + A ++L D R + + L++I Sbjct: 292 ITHEQGSDPTAVVYDAVEYAKANDIDVVLGD---------TAGRLHTSDDLMAQLEKID- 341 Query: 126 QEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158 + + PD T+ +D + + R + E Sbjct: 342 RNIDPDMTLFVDEAVAGQDAVNRAREFNDAAEIDG 376 >gi|42560928|ref|NP_975379.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|126031077|pdb|2JAQ|A Chain A, Structure Of Deoxyadenosine Kinase From M. Mycoides With Bound Dctp gi|126031078|pdb|2JAQ|B Chain B, Structure Of Deoxyadenosine Kinase From M. Mycoides With Bound Dctp gi|126031085|pdb|2JAT|A Chain A, Structure Of Deoxyadenosine Kinase From M.Mycoides With Products Dcmp And A Flexible Dcdp Bound gi|126031086|pdb|2JAT|B Chain B, Structure Of Deoxyadenosine Kinase From M.Mycoides With Products Dcmp And A Flexible Dcdp Bound gi|16040925|emb|CAC85213.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. mycoides SC] gi|42492425|emb|CAE77021.1| deoxyguanosine kinase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301320971|gb|ADK69614.1| deoxynucleoside kinase [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 205 Score = 47.3 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 33/217 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK+T + + + L + + V P + + + + A + Sbjct: 3 IAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTVFKMQIYMLTARS 62 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + ++EN+I L+E I F+ +Y + + ++D + + Sbjct: 63 KQL----KQAKNLENIIFDRTLLEDPI-----FMKVNYDLNNVDQTDYNTYIDFYNNVVL 113 Query: 126 QEVM-P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + P D I L + + R++ R E E + + Sbjct: 114 ENLKIPENKLSFDIVIYLRVSTKTAISRIKKRGRSEELLI-------GEEYWETLNKNYE 166 Query: 179 DIARN----QPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + P +VD+ V T I I+ +L Sbjct: 167 EFYKQNVYDFP--FFVVDAELD---VKTQIELIMNKL 198 >gi|269120975|ref|YP_003309152.1| shikimate kinase [Sebaldella termitidis ATCC 33386] gi|268614853|gb|ACZ09221.1| Shikimate kinase [Sebaldella termitidis ATCC 33386] Length = 165 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 50/212 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I G+ +GKTT LL L+ + YD + E + + G D Sbjct: 1 MKN---IVLIGMPASGKTTISELLAEKLEMEKYDADIYLE---EMEGRLIKDIFSEFGED 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F E + I++ G + +++L Sbjct: 55 YFRDLEE-------------KYTNELSEKNNIIIST----------GGGVIKREKNIENL 91 Query: 121 QEISVQEVMPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++ + I LD +I + R L+++A ++ H + + D Sbjct: 92 KK---NGI----VIFLDRDPSEIAKEDHALRPLLQDTANIERL--YGERYH--LYEGYAD 140 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +IV + S + V I+ I+ E+ Sbjct: 141 ---------YIVKNNSSLEEVIETIIKIINEV 163 >gi|217960008|ref|YP_002338564.1| hypothetical protein BCAH187_A2612 [Bacillus cereus AH187] gi|229139200|ref|ZP_04267775.1| uridine kinase [Bacillus cereus BDRD-ST26] gi|217068310|gb|ACJ82560.1| hypothetical protein BCAH187_A2612 [Bacillus cereus AH187] gi|228644259|gb|EEL00516.1| uridine kinase [Bacillus cereus BDRD-ST26] Length = 187 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 2 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDSYN 42 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+ + ++ E V+ P + + + L+ D S+ Y Sbjct: 43 FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IIVDYPFAY 92 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 93 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNDLKHYITY 141 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 142 ARKGYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180 >gi|209735056|gb|ACI68397.1| Deoxycytidine kinase [Salmo salar] Length = 293 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 30/192 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---- 53 M+ IS EG AGK+T + LL+ Q K+++V + R + Sbjct: 18 MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNAQTQHSEFEELTVSQ 75 Query: 54 -----LLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRF 98 +L ++ A A R + E + + DR+ Sbjct: 76 KNGGNVLQMMYEKPERWAYTFQTYAFMSRVRAQMKSTNGKLREAENPVQFFERSVYSDRY 135 Query: 99 LDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 + ++ Y+ E + + L E + + D I L + ++R+ R Sbjct: 136 IFAANLYESECLNETEWSIYQDWHGWLHEQFGKHIELDGIIYLRAAPERCMERLHRRGRE 195 Query: 154 RESA-CLDYFER 164 E L+Y E+ Sbjct: 196 EEQGIPLEYLEK 207 >gi|18978138|ref|NP_579495.1| signal recognition particle receptor [Pyrococcus furiosus DSM 3638] gi|18893939|gb|AAL81890.1| signal recognition particle receptor (dpa) [Pyrococcus furiosus DSM 3638] Length = 322 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 18/132 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+ G G+GKTT I+ L +L+ + V + T A A L G Sbjct: 127 MFV---GFNGSGKTTTIAKLANWLKNHGFSVVIAA--SDTFRAGAIEQ--LEEHAKRIGV 179 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + A + I+ A G ++L D R + +D +++I Sbjct: 180 KVIKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMKKI 230 Query: 124 SVQEVMPDCTII 135 + + P+ I Sbjct: 231 A-RVTKPNLVIF 241 >gi|330792871|ref|XP_003284510.1| hypothetical protein DICPUDRAFT_27799 [Dictyostelium purpureum] gi|325085540|gb|EGC38945.1| hypothetical protein DICPUDRAFT_27799 [Dictyostelium purpureum] Length = 211 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 72/231 (31%), Gaps = 59/231 (25%) Query: 5 LFIS---FEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGT-----------PAA 47 I+ EG G+GKT L ++ + + V P + + Sbjct: 9 KMITVLCLEGCHGSGKT----ELCKYFSKAGFTVLDEAFLDMPSYSIPNQTLTMETVWVS 64 Query: 48 EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-Q 106 + +L ++ + H+ + K+L+ DR S+ Y Q Sbjct: 65 NWFQRLLKMEQIENSQQSQQN-------NQHLNGNFNNSY--HKVLIADRSPYSAILYSQ 115 Query: 107 GERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + + ++E+ ++ TI L + + R+Q R RE Y Sbjct: 116 NNGHYLDPIISEQIKELKKYTNIDI----KTIYLKVDKNTLWNRIQERLE-REPERKKYN 170 Query: 163 E------RKDVMIHEKRRQIFLDIARNQPDRCHIVD-SAHSFQSVATNILN 206 E V +E R + ++D S+ S + I N Sbjct: 171 EDNYQWMNDTVNFYESRNWDY------------VIDNSSLSSDKIFNQITN 209 >gi|300215217|gb|ADJ79633.1| Deoxyguanosine kinase [Lactobacillus salivarius CECT 5713] Length = 245 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 39/234 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ GI G+GK++ +L + L K Y + + G A R + Sbjct: 2 ITLSGIIGSGKSSLTEILAKELGTKAYYEPVKDNPVLPIFYKGNEIAAKKRA---EGDKE 58 Query: 61 EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------SSY--AYQGE 108 A + F R + I+ A+ + +L DR + + A Q E Sbjct: 59 ATNPYAYLLQTFFLNRRFAM---IKKAMQDDNNIL-DRSIYEDEIFMRMNTEMGNATQVE 114 Query: 109 RDSSQHLFLDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 D + L + ++E ++ + PD I + + + +KR++ R E D Sbjct: 115 YDIYKSLLHNMMEELPLASHKKSPDLMITIKVSYETMIKRIEKRGRDYELIEKDP---SL 171 Query: 167 VMIHEKRRQIFLDIARNQPDR-CHIVDSAH-----SFQ---SVATNILNIVWEL 211 V +++ + + + I+D S + V + N + EL Sbjct: 172 VDYYQRLLKHYDIWMKEYDASPLLIIDGDKYDFMESKEDRVQVLETVENKLLEL 225 >gi|296116712|ref|ZP_06835322.1| adenylate kinase [Gluconacetobacter hansenii ATCC 23769] gi|295976924|gb|EFG83692.1| adenylate kinase [Gluconacetobacter hansenii ATCC 23769] Length = 219 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 77/239 (32%), Gaps = 53/239 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I F G GAGK T LL+ Q D+ +P + + V+ S + Sbjct: 3 IIFLGPPGAGKGTQSKLLEAHYGIAQISTGDMLRAEVAADSPLGKKVKSVMASG---QLV 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + I AR+D RP G + D F R +Q LDS+ + Sbjct: 60 PDDLIIALIEARID------RPDCARGF--ILDGF---------PRTRAQAEALDSMLKK 102 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFER----------KDVMIHE 171 + + + D ++LD+ D R+ R++ + D ++R Sbjct: 103 TGRHI--DLVLLLDVDEDALADRIAGRFTCAKCGEGYNDLYKRPRVEGTCDVCGGHDFVR 160 Query: 172 K---RRQIFLDIARNQPD-------------RCHIVDSAHSFQSVATNILNIVWELVQK 214 + RR+ + + R +D V + V + +K Sbjct: 161 REDDRRETVAARLKAYREQTAPILPYYEGHGRLCRIDGMADIDDVTKQVFAAVDGITKK 219 >gi|257052404|ref|YP_003130237.1| signal recognition particle-docking protein FtsY [Halorhabdus utahensis DSM 12940] gi|256691167|gb|ACV11504.1| signal recognition particle-docking protein FtsY [Halorhabdus utahensis DSM 12940] Length = 394 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 29/139 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L ++L+ + + + G T A + G A Sbjct: 200 IVFTGVNGVGKTTTIAKLAQYLEDRGHSSVLA--NGDTYRA---------GANQQLGEHA 248 Query: 67 EAIVFAAARLDH-------VENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD 118 EA+ + + + + A ++L D R + +D Sbjct: 249 EALDVPYISHEQGGDPTAVIYDAVEYAEANDVDVVLGD---------TAGRLHTSEGLMD 299 Query: 119 SLQEISVQEVMPDCTIILD 137 L +I + + PD T+ +D Sbjct: 300 QLSKIE-RIIEPDMTLFVD 317 >gi|126656131|ref|ZP_01727515.1| Carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp. CCY0110] gi|126622411|gb|EAZ93117.1| Carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp. CCY0110] Length = 169 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 67/196 (34%), Gaps = 45/196 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT L + L YD P + + +D+ + Sbjct: 7 GVSGSGKTTIGKALSQELGYAFYDADDFHPP------KNIAKMSQGIPLDDSDRLPWLLA 60 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 +H + + ++ C + + + D L++ + + Sbjct: 61 IKLVIDEHQKE------QKNAVITC--------------SALKQSYRDLLEKNTTNIIW- 99 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L + LKR+Q R D+F +++++I + F + +P+ Sbjct: 100 ---IYLKGSYETFLKRLQQR--------PDHFMKENMLISQ-----FEAL--EEPENAVT 141 Query: 191 VDSAHSFQSVATNILN 206 +D S + I+N Sbjct: 142 IDVNLSVAEIVQEIIN 157 >gi|291231252|ref|XP_002735582.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 483 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 66/231 (28%), Gaps = 46/231 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--VDEFGA 64 I G G+GK T +LL K + V + + + + + Sbjct: 271 IVILGPTGSGKKTQAALLA----SKYHCV-------SVSTGQLVKEAIANESKMGEALKP 319 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + N+I L DR +G + + + Sbjct: 320 YVERDMMIPD------NLILNLLK-------DRLCQIDCVSRGWVLRGFPTTREQAENLC 366 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYFERKDVMIH 170 P+ T LD+P D ++R+ R + R D + Sbjct: 367 SAGFEPNRTFFLDVPNDSVIERLVLRTTDPITGERYHELYNPPRTQEIKDRCRQHVKDTE 426 Query: 171 EKR------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 E+ Q + + + V++ +V + +++ + KR Sbjct: 427 EEVKKRLASYQAYASEIADFYESAQHVNADQDPHTVFECLESMLVNPLPKR 477 >gi|171920640|ref|ZP_02931880.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178869|ref|ZP_02964642.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024352|ref|ZP_02997023.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518707|ref|ZP_03004132.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524140|ref|ZP_03004212.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867437|ref|ZP_03079441.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273416|ref|ZP_03205952.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554313|ref|YP_002284511.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550652|ref|ZP_03771601.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551302|ref|ZP_03772248.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|171903366|gb|EDT49655.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209506|gb|EDU06549.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018618|gb|EDU56658.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997698|gb|EDU66795.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660069|gb|EDX53449.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660913|gb|EDX54166.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249936|gb|EDY74716.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541814|gb|ACI60043.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225379117|gb|EEH01482.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379806|gb|EEH02168.1| deoxyguanosine kinase [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 232 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 29/224 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I+F GK+T L Q N V+ E + +LL+ + Sbjct: 25 GGM-IAF------GKSTLAQALHEKYQPSNV-VYEMVE------GDKLMDLLLAKMYERE 70 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSL 120 +F + + + + + DR F D +A+ S + D L Sbjct: 71 NNVLFGSLFQLYFVLNRFANYKNNCNRENLTIFDRSIFEDWLFAHANIDKPSVFSYYDGL 130 Query: 121 QEISVQEV-----MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + +E+ +P +ILD ++ +R+ R E E ++ + Sbjct: 131 WQGVCKELIYEHGVPKLYVILDGDWELFKERIFKRNRKVEIDNFSINE----TYFKRLLE 186 Query: 176 IFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ + + ++ ++D+ +S + + + EL ++ Sbjct: 187 MYKNYMVNVCKDFGIDYIVLDARNSVEHNVNEVTKRLQELKNEQ 230 >gi|242063246|ref|XP_002452912.1| hypothetical protein SORBIDRAFT_04g034900 [Sorghum bicolor] gi|241932743|gb|EES05888.1| hypothetical protein SORBIDRAFT_04g034900 [Sorghum bicolor] Length = 213 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 69/233 (29%), Gaps = 71/233 (30%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 33 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 72 Query: 71 FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114 +I + EGKI+ D+FL + R+ Sbjct: 73 ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKNENDKFLIDGF----PRNEENR 118 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 +++ +IS P + D + +R+ R R ++ +++ E Sbjct: 119 AAFENVTKIS-----PAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIKKRFKTFVESSL 173 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + + D+ +D+A V ++ I +P SSK + Sbjct: 174 PVIEHYNSR-----DKVKKIDAAKPIPEVFEDVKAI--------FAPFSSKAE 213 >gi|300702345|ref|XP_002995177.1| hypothetical protein NCER_102036 [Nosema ceranae BRL01] gi|239604052|gb|EEQ81506.1| hypothetical protein NCER_102036 [Nosema ceranae BRL01] Length = 179 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 45/212 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L I G G GK T L + N+ T + + + +L + Sbjct: 4 LIIV--GPPGCGKGTISKKLAKDF---NFKHVSTGDLLRNTGDKNVQEILKNGN------ 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 F + + + +I L+ + D F R Q +L+ ++ + Sbjct: 53 ------FVSD--ECITQLIEEELLNNS-CILDGF---------PRTLVQAEYLEKCKDKN 94 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180 + ++++ ++R+QNR RE D DV + +R +I+ + Sbjct: 95 INIS---LVLLINTSEKECIRRIQNREDQRED---DR----DVEVIRRRLKIYHMCTEPL 144 Query: 181 ARNQPDR--CHIVDSAHSFQSVATNILNIVWE 210 +R V+ + V ++L I+ Sbjct: 145 IEFYKERNLLVTVNGNKTKDEVYNDVLEILKR 176 >gi|197303017|ref|ZP_03168065.1| hypothetical protein RUMLAC_01744 [Ruminococcus lactaris ATCC 29176] gi|197297872|gb|EDY32424.1| hypothetical protein RUMLAC_01744 [Ruminococcus lactaris ATCC 29176] Length = 211 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 46/216 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59 G+ I G G+GK T + L + TR+P + Sbjct: 3 KKGILIVVSGFSGSGKGTLMKALMKKYPENYALSISATTRQPREGETDGKEYFFISKEEF 62 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ A +E I +A ++ + + L GK ++ + QG Sbjct: 63 EKMIANSELIEYAKYVENYYGTPRDYVERQLESGKDVILE------IEIQGA-------- 108 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + V++ PD T++L + + +++R R + LD E + Sbjct: 109 ------LKVKKAFPD-TLLLFITPPTAQE-LRSRLVGRGTETLDVIESR----------- 149 Query: 177 FLDIARNQPDR-----CHIVDSAHS--FQSVATNIL 205 +D A + + IV+ + V I Sbjct: 150 -MDRACEEAEGMDQYDYLIVNDDLDTCVEEVHQIIR 184 >gi|73977763|ref|XP_852849.1| PREDICTED: similar to UMP-CMP kinase (Cytidylate kinase) (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) [Canis familiaris] Length = 196 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 26/150 (17%) Query: 78 HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125 +I + +GKI+ L R +D + A Q + D+LQ + Sbjct: 48 QYGELIEKYIKDGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKT 107 Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182 + D + D +I ++R R + + + + EKR Q +L + Sbjct: 108 MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKP 161 Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207 + + +D++ S V ++ I Sbjct: 162 IIDLYEEMGKVKKIDASKSVDEVFDEVVKI 191 >gi|15790659|ref|NP_280483.1| adenylate kinase [Halobacterium sp. NRC-1] gi|169236398|ref|YP_001689598.1| adenylate kinase [Halobacterium salinarum R1] gi|13628430|sp|Q9HPA7|KAD_HALSA RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|229487585|sp|B0R683|KAD_HALS3 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|10581188|gb|AAG19963.1| adenylate kinase [Halobacterium sp. NRC-1] gi|167727464|emb|CAP14252.1| adenylate kinase [Halobacterium salinarum R1] Length = 216 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 76/232 (32%), Gaps = 60/232 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEFGAEAEAI 69 G GAGK T L + T G A + + L D GA +A Sbjct: 10 GAPGAGKGTQSRRLVDEF---GVEHVTT---GDALRANKTKDITHLDVEYDTPGAYMDAG 63 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 + V +++ AL + D ++ Y R+ SQ +LDS+ ++ Sbjct: 64 ELVPDAV--VNEIVKTALDD-----ADGYVLDGY----PRNESQTEYLDSITDL------ 106 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDV------MIHEKRRQIFL 178 D + LD+ D + R+ R + + E + V ++++ Sbjct: 107 -DVVLYLDVDEDELVGRLTGRRVCEDCGATFHVSFNQPETEGVCDACGGSLYQREDDT-E 164 Query: 179 DIARNQPDRCHI--------------------VDSAHSFQSVATNILNIVWE 210 + AR +R + VD + V T++ V E Sbjct: 165 ETAR---ERITVYEENTAPVVEYFREQGVLAEVDGERTPDEVWTDVAAAVDE 213 >gi|256820357|ref|YP_003141636.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase [Capnocytophaga ochracea DSM 7271] gi|315223485|ref|ZP_07865341.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Capnocytophaga ochracea F0287] gi|256581940|gb|ACU93075.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase [Capnocytophaga ochracea DSM 7271] gi|314946520|gb|EFS98512.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Capnocytophaga ochracea F0287] Length = 375 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 21/183 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG G+GKTT + + K + P E + E Sbjct: 179 KYIAIEGNIGSGKTTLATKIAEDFNAKLILEQFSDNPFLPKFYENPKQY---GFTLEMSF 235 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122 E R + + + + ++ D + S + + L Sbjct: 236 LTE-------RYQQMCEQLAQMDLFKEFVVSDYDIFKSLIFSKVTLTDDEFVLYRKLFYI 288 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181 + Q + PD + L D ++ ++ R E DY +K +LD Sbjct: 289 LYSQIIKPDLYVFLYQNTDRLIENIKKRGRTYEQNISPDYL--------KKIHYGYLDFI 340 Query: 182 RNQ 184 + Sbjct: 341 QKN 343 >gi|199597539|ref|ZP_03210968.1| Deoxynucleoside kinase [Lactobacillus rhamnosus HN001] gi|258508217|ref|YP_003170968.1| deoxynucleoside kinase [Lactobacillus rhamnosus GG] gi|199591562|gb|EDY99639.1| Deoxynucleoside kinase [Lactobacillus rhamnosus HN001] gi|257148144|emb|CAR87117.1| Deoxynucleoside kinase [Lactobacillus rhamnosus GG] gi|259649533|dbj|BAI41695.1| deoxynucleoside kinase [Lactobacillus rhamnosus GG] Length = 242 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 74/230 (32%), Gaps = 36/230 (15%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA-IVFA 72 GAGKT+ +L ++ + G A + + A I F Sbjct: 9 GAGKTSLTKVLSADMEA---PAYYEDVEGNGMIANMLQKFYGAGADSRKRTGAMLQIAFL 65 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLDSLQEISVQ 126 R ++ + + D L+S + GE D + +L + Sbjct: 66 TFRYQQLKKAVTQENA-----IMDSSLESDFVMASQLHKHGEIDDIDYNVYVTLSQEMQS 120 Query: 127 EV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 V +PD + L + D L +Q+R E + + V + + + D Sbjct: 121 NVNGSPWNGLPDLAVYLKIDPDHELDEIQSRGRDMEDI---RQKPELVAYYRRVNAAYQD 177 Query: 180 IARNQ-PDRCHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220 A+ +D SA +V I + + +L ++SP + Sbjct: 178 WAKGYTRSSMITIDRDRYDFMHSAADRATVLDQIESKLVDL--GKLSPQT 225 >gi|104774798|ref|YP_619778.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423879|emb|CAI98920.1| Deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 220 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 58/173 (33%), Gaps = 43/173 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L + L + E P +L + Sbjct: 10 IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 57 Query: 67 EAIV--FAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGER 109 + F RL+ I A +L DR +D+ A YQ Sbjct: 58 FLLNTYFLNKRLE----EINAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY- 111 Query: 110 DSSQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H +D++ E PD I + + +D LKR+ R RE LD Sbjct: 112 ----HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRG--REFEQLD 158 >gi|260590786|ref|ZP_05856244.1| deoxynucleoside kinase family protein [Prevotella veroralis F0319] gi|260537272|gb|EEX19889.1| deoxynucleoside kinase family protein [Prevotella veroralis F0319] Length = 204 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 66/195 (33%), Gaps = 30/195 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GKTT ++L +R + + +++ + Sbjct: 3 IAIAGNIGSGKTTLTTMLA---KRYGWKPRFESVDYNPYLEDYYKNI------KRWSFAM 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118 E D +E G+ ++ DR + ++YA D +++ Sbjct: 54 EVFFLKERFRDLLE-----ISRSGESVVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 ++++ PD I L V + ++ R E LDY E KR F Sbjct: 109 LFEDMTDAVKFPDLMIYLRSSVSHLVSNIEKRGREYEQKMPLDYLEN-----LNKRYDDF 163 Query: 178 LDIARNQPDRCHIVD 192 I+ R +VD Sbjct: 164 --ISDKYKGRVLVVD 176 >gi|115449031|ref|NP_001048295.1| Os02g0778400 [Oryza sativa Japonica Group] gi|47497455|dbj|BAD19510.1| putative UMP/CMP kinase a [Oryza sativa Japonica Group] gi|113537826|dbj|BAF10209.1| Os02g0778400 [Oryza sativa Japonica Group] Length = 214 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 47/208 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 34 GGPGSGKGTQCANIVEHF---GF--------IHLSAGDLLRAEIKSGSENG--------- 73 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125 +I + EGKI+ + + + +D + Sbjct: 74 ----------TMIENMIKEGKIVPSE-VTIKLLQEAMIKSGNDKFLIDGFPRNEENRAAF 122 Query: 126 QE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179 + + P + D + +R+ R R ++ ++ + E + + Sbjct: 123 ENVTKITPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYY-- 180 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207 N D+ +D+A V ++ I Sbjct: 181 ---NAKDKVKKIDAAKPIPEVFEDVKAI 205 >gi|32474629|ref|NP_867623.1| guanylate kinase [Rhodopirellula baltica SH 1] gi|45477095|sp|Q7UP92|KGUA_RHOBA RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|32445168|emb|CAD75170.1| guanylate kinase [Rhodopirellula baltica SH 1] gi|327540688|gb|EGF27260.1| guanylate kinase [Rhodopirellula baltica WH47] Length = 209 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 49/229 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-------HVTREPGGTPAAEAARHVL 54 + G + G GAGK+T + L + DV TREP L Sbjct: 14 HPGRLVIISGPSGAGKSTVVKQLMKRC-----DVPLQLSVSATTREPRPGEIHGQDYFFL 68 Query: 55 LSCGVD---EFGAEAEA-IVFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 + + E VF+ + +++ + L GK ++ + QG Sbjct: 69 SHEEFERRRKLNDFVECKQVFSMGQWYGTLKDQVATGLNAGKWVILE------IDVQGAM 122 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + M + +R++NR + ES+ E + Sbjct: 123 AVLDDPHYRPVTIFVHPGSM-----------EELERRLRNRGTESESSLTARLETAAAEM 171 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 R + I S + T I I+ + Q++ +P Sbjct: 172 QCLSRYQYEII-------------NESVDNAVTEICQILLD--QRKTTP 205 >gi|324326525|gb|ADY21785.1| hypothetical protein YBT020_12735 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 186 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 41/215 (19%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56 MN I+ + G GKTT L L + +D + + + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLINSKALYFDSYH-FDNCPADICKWI------ 53 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + + + H+ IR + ++ I+ D +AY Sbjct: 54 --DDGANYDEWVLTPLIKDIQHL---IRDSKVDYIIV------DYPFAY----------- 91 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L Q + D TI +D P+DI + R R E+ + + K + + R+ Sbjct: 92 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEMHNDLKHYITYA--RKG 144 Query: 177 FLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 +L+ +P+ ++D A S + I ++ Sbjct: 145 YLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 179 >gi|320165340|gb|EFW42239.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 380 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 5/103 (4%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G AGKTT +S+L F +R+ + V+ E + L + + Sbjct: 7 IVLTGGPCAGKTTVLSVLSEFFERRGWKVYRVPEAATVLLSGGVSFAELDARMAA-QFQN 65 Query: 67 EAIVFAAARLDHVENVIRPALMEG----KILLCDRFLDSSYAY 105 + D ++ R A+ G ++L+CDR + AY Sbjct: 66 NLLNVMLRLEDTYHDLARGAIAAGATQSQVLICDRGAMDASAY 108 >gi|294506963|ref|YP_003571021.1| deoxynucleoside kinase [Salinibacter ruber M8] gi|294343291|emb|CBH24069.1| Deoxynucleoside kinase [Salinibacter ruber M8] Length = 217 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 51/155 (32%), Gaps = 15/155 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG GAG TT LL + V E P E + + + Sbjct: 12 YVAIEGAIGAGTTTLTELLADRFEAD--PVLERFE--DNPFLERFYE-----DRERWAFQ 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + + F A+R + + L + D + D +A Q L+ + Sbjct: 63 TQ-LAFLASRFRQQKELSERDLFRDFAV-SD-YTFDKDRIFARQTLSGDELQLYESLFRL 119 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + PD + L + L+ ++ R E Sbjct: 120 MEPTVPSPDLVVYLRSSPERLLQNIEKRDRPYERD 154 >gi|153006648|ref|YP_001380973.1| deoxynucleoside kinase [Anaeromyxobacter sp. Fw109-5] gi|152030221|gb|ABS27989.1| deoxynucleoside kinase [Anaeromyxobacter sp. Fw109-5] Length = 215 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 52/168 (30%), Gaps = 31/168 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +I+ EG G GKT L L + H P R Sbjct: 1 MERPRYIAVEGPIGVGKTALAQALAERLGARLVLEHAEENPFLASFYGDRRK-------- 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119 A + F +R + + + L F S+ A Y +D S Sbjct: 53 --HAFQAQLFFLLSRFQQQQALFQQDL----------FTQSTIADYLFAKDRIFAALTLS 100 Query: 120 LQEISVQE----------VMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 E+++ + V PD + L D+ L RV+ R E + Sbjct: 101 ADELALYDRVYELLGPRTVKPDLVVYLQARADVLLSRVRRRGRDFERS 148 >gi|330798489|ref|XP_003287285.1| hypothetical protein DICPUDRAFT_151373 [Dictyostelium purpureum] gi|325082745|gb|EGC36218.1| hypothetical protein DICPUDRAFT_151373 [Dictyostelium purpureum] Length = 196 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 63/208 (30%), Gaps = 43/208 (20%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK T + + L D+ G+ + ++ + + Sbjct: 15 GGPGSGKGTQCANIVEEFGFVHLSAG--DLLRAEMNSGSKNGDMIATMIKNGEIVPSIVT 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E + +N I+ GK L D F + + + D++++I Sbjct: 73 IELL----------KNAIKS--NPGKNFLVDGF--------PRNEENNKSWEDNMKDIVD 112 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH------EKRRQIFLD 179 + + D P ++ +R+ R D E H + + Sbjct: 113 TKF----VLYFDCPEEVMTERLLKRGES-SGRSDDNMESIRKRFHTFNVQTKLVIDYY-- 165 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207 Q D+ +D+ V ++ + Sbjct: 166 ---GQFDKVRRIDANRDVSLVYKDVQAL 190 >gi|255539731|ref|XP_002510930.1| uridylate kinase plant, putative [Ricinus communis] gi|223550045|gb|EEF51532.1| uridylate kinase plant, putative [Ricinus communis] Length = 298 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 68/201 (33%), Gaps = 37/201 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R +LS D I+ Sbjct: 119 GGPGSGKGTQCLKIAKTF---GFK--------HLSAGDLLRREILSNSDDG-----AMIL 162 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV-- 128 V + + L++ ++ L D +S + G + + I+ + + Sbjct: 163 NTIKEGRIVPSEVTVKLIKKEMELSD---NSKFLIDGFPRTEE-------NRIAFEHIIG 212 Query: 129 -MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ---IFLDIARNQ 184 P+ + D P + +KRV NR R +D +K + + + ++ Sbjct: 213 AEPNIVLFFDCPQEEMVKRVLNRNEGRVDDNIDTI-KKRLEVFSALNLPVIGYY----SK 267 Query: 185 PDRCHIVDSAHSFQSVATNIL 205 + H +++ + + + Sbjct: 268 KGKLHTINAVGTVDEIFEQVR 288 >gi|303275942|ref|XP_003057265.1| cytoplasmic dynein heavy chain 1b [Micromonas pusilla CCMP1545] gi|226461617|gb|EEH58910.1| cytoplasmic dynein heavy chain 1b [Micromonas pusilla CCMP1545] Length = 4425 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 30/123 (24%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GK+T +L+ ++ V P R LL G + Sbjct: 2136 GIIIV--GPSGSGKSTLWQILEGAYKKLGRPVKRHVMNPKAIH-----RQQLL--GHMDM 2186 Query: 63 GAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ AAR V++ +L + ++CD +++SL Sbjct: 2187 DTREWFDGVLTDAAR-----QVVKESLDQHSWIICD-------------GDVDPEWIESL 2228 Query: 121 QEI 123 + Sbjct: 2229 NSV 2231 >gi|126305744|ref|XP_001374841.1| PREDICTED: similar to Cytidylate kinase [Monodelphis domestica] Length = 246 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 68/218 (31%), Gaps = 57/218 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + + G T + +L + E Sbjct: 60 GGPGAGKGTQCTRIVQK-------------YGYTHLSAG--DLLRNERNKPDSQYGEL-- 102 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSY---AYQGERDSSQHLFL--D 118 I + EG+I+ L R +D + A Q + D Sbjct: 103 ------------IEKYIREGEIVPVEITISLLKREMDKTMEANA-QKNKFLIDGFPRNQD 149 Query: 119 SLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +LQ + + D + D +I ++R R + + E KR Q Sbjct: 150 NLQGWNKTMDGKADVSFILFFDCDNEICIERCLERGKSSGRSDDNR-ESLG-----KRIQ 203 Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 +L + + + VD++ S + V ++L I Sbjct: 204 TYLQCTKPIIDLYEEMGKVRKVDASKSVEEVFGDVLKI 241 >gi|195127427|ref|XP_002008170.1| GI11969 [Drosophila mojavensis] gi|193919779|gb|EDW18646.1| GI11969 [Drosophila mojavensis] Length = 225 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 68/213 (31%), Gaps = 38/213 (17%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G GK T + + L D+ G+ + +++S Sbjct: 36 GGPGCGKGTQCAKIVEKYGFTHLSSG--DLLRDEVASGSDKGRELQELMVSGA---LVPN 90 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AE + A + + + L++G ++ ++ +I+ Sbjct: 91 AEVLSLLNAAITRAKGASKGFLIDGY------------------PREKNQGIEFEAQIAP 132 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEKRRQIFLDIAR 182 D I D + LKR+ R + D E R + ++ DI Sbjct: 133 A----DLAIYFDCSEETMLKRILARAAAATVKRADDNEATIRSRLQTFKRNTS---DILA 185 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +++ + + ++ + ++QK+ Sbjct: 186 LYEEKTLTINAERDVEDIFMEVVEAIDCVLQKK 218 >gi|3913952|sp|O24464|KAD_PRUAR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|2351578|gb|AAB68604.1| adenylate kinase homolog [Prunus armeniaca] Length = 231 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 68/227 (29%), Gaps = 66/227 (29%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F++F G G+GK T + + + A + R + S Sbjct: 48 FVTFVLGGPGSGKGTQCAKIVEAF---GF--------THVSAGDLLRREIASGSA----- 91 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL--------L------CDRFLDSSYAYQGERD 110 +VI + EGKI+ + D +Y + + Sbjct: 92 --------------YGSVILSTIREGKIVPSQVTVELIQKEMESSD-----NYKFLIDGF 132 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + ++ PD + D P +KRV NR R +D Sbjct: 133 PRSEENRKAFEQ--TIGAEPDVVLFFDCPEQEMVKRVLNRNQGRVDDNIDTI-------- 182 Query: 171 EKRRQIFLDI----ARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211 +KR +IF ++ R H +++ + + + I L Sbjct: 183 KKRLEIFDELNWPVINYYSQRGKLHKINAVGTVDEIFEKVRPIFAPL 229 >gi|113195351|ref|YP_717481.1| thymidylate kinase [Taterapox virus] gi|90660627|gb|ABD97740.1| thymidylate kinase [Taterapox virus] Length = 58 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M+ G I FEG++ +GKTT + + + P + L+ Sbjct: 1 MSRGALIVFEGLDKSGKTTQCMNIMESISAN--TIKYLNFPQRSTVTGKMIDDYLTRKN 57 >gi|300362720|ref|ZP_07058895.1| deoxyguanosine kinase [Lactobacillus gasseri JV-V03] gi|300353148|gb|EFJ69021.1| deoxyguanosine kinase [Lactobacillus gasseri JV-V03] Length = 224 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ +L ++L G P E+ +L + Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120 A + F R I+ AL + +L DR + + +Q D + +D+ Sbjct: 51 AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATKEEVDTY 105 Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169 E+ + +M PD + +D+ D LKR+Q R E D E Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160 Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 +++ + + P +D Q V I+ + E+ Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKFDFMASEEDRQEVLNQIVAKLKEM 211 >gi|154249911|ref|YP_001410736.1| cytidylate kinase [Fervidobacterium nodosum Rt17-B1] gi|171769431|sp|A7HME6|KCY_FERNB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|154153847|gb|ABS61079.1| cytidylate kinase [Fervidobacterium nodosum Rt17-B1] Length = 219 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 86/234 (36%), Gaps = 54/234 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAE 65 I+ +G G+GKTT L+ + L D T A + L GV+ Sbjct: 5 IAIDGPAGSGKTTVAKLIAQKL---GIDYL------DTGAMYRIVGLYLHSIGVEPKSTS 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD--RFLDSSY-AYQGERDSSQHLFLDSLQE 122 + I+ +E + + + GK + D R ++ A Q + FL +Q+ Sbjct: 56 IKDILEKVN----IEYIGKDYYLNGKKV-GDEIRTPEAGMFASQYAANPEVREFLTKIQK 110 Query: 123 -------ISVQE------VMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 I + VMPD T I L ++ R + RY +S ++ V Sbjct: 111 QICSNRSIVAEGRDIGTVVMPDATVKIFLVASPEV---RARRRYEELKSKNME------V 161 Query: 168 MIHEKRRQIFLDIARNQPDR----------CHIVD-SAHSFQSVATNILNIVWE 210 E RQI + +N +R +D S S + V IL+IV E Sbjct: 162 SYEELLRQI-EERDKNDSNRDVAPLVKAPDAIEIDTSNLSIEEVVEKILDIVKE 214 >gi|89273798|emb|CAJ82118.1| cytidylate kinase [Xenopus (Silurana) tropicalis] Length = 232 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 65/223 (29%), Gaps = 56/223 (25%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ F G GAGK T + + A + R Sbjct: 40 FVVFVLGGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----- 83 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117 +I + +G+I+ L R ++ + A G + Sbjct: 84 -------------QYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGF 130 Query: 118 ----DSLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 D+LQ D + D + ++R R + + + + Sbjct: 131 PRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL--- 184 Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 EKR Q +L R + + VD++ S V T + +I Sbjct: 185 EKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDI 227 >gi|196040426|ref|ZP_03107727.1| hypothetical protein BC059799_2511 [Bacillus cereus NVH0597-99] gi|196028911|gb|EDX67517.1| hypothetical protein BC059799_2511 [Bacillus cereus NVH0597-99] Length = 186 Score = 46.9 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 70/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLINS-------------------KALYFDSYH 41 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+ + ++ E V+ P + + + L+ D S+ Y Sbjct: 42 FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IIVDYPFAY 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R DY E IH Sbjct: 92 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DYKEDTMSEIHNDLKHYITY 140 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D + S + I ++ Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGSLSVDEIINQIEEELYR 179 >gi|115376116|ref|ZP_01463361.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella aurantiaca DW4/3-1] gi|115366931|gb|EAU65921.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella aurantiaca DW4/3-1] Length = 225 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 58/185 (31%), Gaps = 29/185 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 FI+ G GAGKT S L R YD+ EP L+ + Sbjct: 24 RKKFIAVAGNIGAGKTELTSFLCRK-----YDLTPYFEPNDQNP-------YLAPFYKDM 71 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHL 115 + A L H + R +L DR + D+ + Q D Sbjct: 72 --KTWAFRSQIFFLTHKFRLHRELERHSGTVLQDRTIYEDAEIFAKNLHRQRFIDRRDWQ 129 Query: 116 FLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L E Q + PD I L PV +R++ R E V ++ Sbjct: 130 TYRELYETIAQALSPPDLMIYLRCPVQTLRERIRLRGRSMEKDIP-------VAYLKRLN 182 Query: 175 QIFLD 179 ++ + Sbjct: 183 ALYEE 187 >gi|76800746|ref|YP_325754.1| signal recognition particle receptor SRalpha [Natronomonas pharaonis DSM 2160] gi|76556611|emb|CAI48182.1| signal recognition particle receptor SRalpha [Natronomonas pharaonis DSM 2160] Length = 368 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 17/147 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L R+ + + + + G T A A + D + Sbjct: 175 IVFTGVNGVGKTTSIAKLARWFEERGHSSVLA--NGDTYRAGANEQI--EEHADALDKKI 230 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + A ++L D R + + L++I Sbjct: 231 ITHEQGGDPAAVIYDAVEYAEANDVDVVLGD---------TAGRLHTADDLMAQLEKID- 280 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYS 152 + V PD T+ + + + NR Sbjct: 281 RVVDPDLTLF--VDEAVAGQDATNRAK 305 >gi|14520718|ref|NP_126193.1| signal recognition particle receptor [Pyrococcus abyssi GE5] gi|5457934|emb|CAB49424.1| GTP-binding signal recognition particle receptor (SRP alpha, SRP54) [Pyrococcus abyssi GE5] Length = 322 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G+GKTT I+ L +L++ + V + T A A L G + Sbjct: 126 ILFVGFNGSGKTTTIAKLAHWLKKNGFSVVIAA--SDTFRAGAIEQ--LEEHAKRVGVKV 181 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R + +D +++I+ Sbjct: 182 IKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLMDEMRKIA- 231 Query: 126 QEVMPDCTII 135 + P+ + Sbjct: 232 RVTKPNLVVF 241 >gi|170691345|ref|ZP_02882510.1| putative deoxynucleoside kinase [Burkholderia graminis C4D1M] gi|170143550|gb|EDT11713.1| putative deoxynucleoside kinase [Burkholderia graminis C4D1M] Length = 226 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G GKT+ L + + + P P E + Sbjct: 19 YLAIEGPIGVGKTSLARRLAQRWSMQ----ELFERPEENPFLERFYR-----DTTRYALP 69 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 A+ FA R ++V L G L+ D F+ + +A ++ HL+ Sbjct: 70 AQLH-FALQRAQQAQDVNAVQLA-GTPLIAD-FMTQKNDIFARLTLQEDEWHLYRALAAR 126 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 127 LEVSAPAPDFVVYLQASPEVLFSRIQKRAVPMELQISDAY 166 >gi|307566423|ref|ZP_07628858.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] gi|307344848|gb|EFN90250.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A] Length = 357 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 35/106 (33%), Gaps = 5/106 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V V E + ++ + Sbjct: 1 MKR---IVLTGGPCAGKTTALVKVIEHFSSIGYKVFVIPEVPTLFSQAGMDYLTKNKHFF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A A DH I + + I++CDR AY Sbjct: 58 FEGEKATLDTQIALE-DHFSR-IAKTIKKPTIIVCDRGTMDISAYM 101 >gi|225718330|gb|ACO15011.1| Deoxynucleoside kinase [Caligus clemensi] Length = 251 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 34/211 (16%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 EG GAGKTT + +++ +V EP R+ LL + ++ Sbjct: 36 VVEGNIGAGKTTFLESIRKSSPPGLIEVV--EEPVQEWRTYKDRYDLLDIMYE--DSKKW 91 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSLQ 121 + +F + I + +R S A + L +L Sbjct: 92 SFLFQIQVQLSMMKKYSLPPTRP-IRIMER----SLARFCFVENLYNNGHLNDIELHTLN 146 Query: 122 EISVQEVM-------PDCTIILDLPVDIGLKRV--QNRYSLRESACLDYF----ERKDVM 168 ++ + D I L ++ +R+ ++R +S L++F E + Sbjct: 147 DLYNFVIKHDCFLCQTDLIIYLRTSPEVAYERMLRRSRSEAEKSLSLEHFRNIHELHEDW 206 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199 + K + F + P ++D Sbjct: 207 LFRKTK--FQPL----PCPIVVIDGNQGIDD 231 >gi|296089001|emb|CBI38704.3| unnamed protein product [Vitis vinifera] Length = 228 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 33/98 (33%), Gaps = 8/98 (8%) Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + + I Q + PD + D + +R+ NR R + ++ + E Sbjct: 124 NEENRTAFENIVGQILEPDFVLFFDCSQEELTRRILNRNQGRVDDNIQAIPKRFQVYFES 183 Query: 173 ---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + + +D+ S + V + +I Sbjct: 184 TLPVIDYY-----SSKGKVQKIDAERSIEEVFEAVKSI 216 >gi|319652962|ref|ZP_08007067.1| hypothetical protein HMPREF1013_03682 [Bacillus sp. 2_A_57_CT2] gi|317395311|gb|EFV76044.1| hypothetical protein HMPREF1013_03682 [Bacillus sp. 2_A_57_CT2] Length = 282 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ I EG+ G+GK+T L+ L + + + E A+ + D Sbjct: 1 MDT-KLILIEGLPGSGKSTTARLVHEILMQNGIESELYCEGDLNHPADY--ESVAYFEND 57 Query: 61 EFGAEAEAIVFAAARLDHVENVI 83 ++ E ++A R +EN I Sbjct: 58 QWHRLLEE--YSAFRDQIIENCI 78 >gi|192361169|ref|YP_001981354.1| gluconokinase [Cellvibrio japonicus Ueda107] gi|190687334|gb|ACE85012.1| gluconokinase [Cellvibrio japonicus Ueda107] Length = 196 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 72/212 (33%), Gaps = 52/212 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCGVDEF 62 L I G+ G+GKTT L Y G +E AR DE Sbjct: 21 LLIVM-GVSGSGKTTLAQRLAAHF---GYRCL----DGDDFHSEDAKARMARGEPLTDEM 72 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + + H++ AL G+ S A+ G R + + +L++ Sbjct: 73 R-----LPWVSNICHHLQQ----ALSAGEH--------SVLAFSGLRRAHRQ----ALRD 111 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--LDI 180 + ++ + LD RV NR + L R F L+ Sbjct: 112 VGLKT----LVVFLDGDEATIQDRVNNRTGHFANPRL-------------VRSQFESLEC 154 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILN-IVWEL 211 N+ D +D S +++ T ++ I+ +L Sbjct: 155 PLNEKDVYR-IDVRQSPEAILTQAIDWIITQL 185 >gi|90962611|ref|YP_536527.1| deoxyguanosine kinase [Lactobacillus salivarius UCC118] gi|227891325|ref|ZP_04009130.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741] gi|301301096|ref|ZP_07207255.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821805|gb|ABE00444.1| Deoxyguanosine kinase [Lactobacillus salivarius UCC118] gi|227866903|gb|EEJ74324.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741] gi|300851308|gb|EFK79033.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 245 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 39/234 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ GI G+GK++ +L + L K Y + + G A R + Sbjct: 2 ITLSGIIGSGKSSLTEILAKELGTKAYYEPVKDNPVLPIFYKGNEIAAKKRA---EGDKE 58 Query: 61 EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------SSY--AYQGE 108 A + F R + I+ A+ + +L DR + + A Q E Sbjct: 59 ATNPYAYLLQTFFLNRRFAM---IKKAMQDDNNIL-DRSIYEDEIFMRMNTEMGNATQVE 114 Query: 109 RDSSQHLFLDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 D + L + ++E ++ + PD I + + + +KR++ R E D Sbjct: 115 YDIYKSLLHNMMEELPLASHKKSPDLMITIKVSYETMIKRIEKRGRDYELIEKDP---SL 171 Query: 167 VMIHEKRRQIFLDIARNQPDR-CHIVDSAH-----SFQ---SVATNILNIVWEL 211 V +++ + + + I+D S + V + N + EL Sbjct: 172 VDYYQRLLKHYDIWMKEYDASPLLIIDGDKYDFMESKEDRVQVLETVENKLLEL 225 >gi|302847847|ref|XP_002955457.1| hypothetical protein VOLCADRAFT_121426 [Volvox carteri f. nagariensis] gi|300259299|gb|EFJ43528.1| hypothetical protein VOLCADRAFT_121426 [Volvox carteri f. nagariensis] Length = 662 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 46/212 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65 G G+GK T +K+ +Y A + R + S V +E E Sbjct: 481 GGPGSGKGTQCDKIKQ-----DYKCVHLS------AGDLLRAEVKSGSVVGKKCEELMRE 529 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + FA + +I GK L D F LD ++ Sbjct: 530 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFE- 570 Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179 +MP + D P + KR+ R R + ++ E+ + +L Sbjct: 571 GNIMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQSLPVKDHYLA 630 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +CH++ + + V N++ ++ L Sbjct: 631 Q-----GKCHVISAVPPPEEVYENVVALLDRL 657 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 42/232 (18%), Positives = 77/232 (33%), Gaps = 48/232 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----- 59 I G G+GK T +K+ +Y+ A + R + S Sbjct: 52 KIIFVLGGPGSGKGTQCDKIKQ-----DYECVHLS------AGDLLRAEVKSGSAVGSKC 100 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 +E E + + FA + +I GK L D F LD Sbjct: 101 EELMREGKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQ 142 Query: 120 LQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---R 173 ++ +MP + D P + KR+ R R + ++ E+ Sbjct: 143 AEQFESN-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQSLPV 201 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL--VQKRVSPLSSKK 223 + +L +CH+V + V ++ NI+ +L +K+ + S + Sbjct: 202 KDHYLAQ-----GKCHVVSAVPHPDVVYESVTNILDKLDAPKKQAAKADSPR 248 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 66/209 (31%), Gaps = 46/209 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65 G G+GK T + L+ Y+ A + R + S V +E E Sbjct: 276 GGPGSGKGTQC---AQILEE--YECVHLS------AGDLLRAEVKSGSVVGRKCEELMRE 324 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + FA + +I GK L D F LD ++ Sbjct: 325 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFE- 365 Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179 +MP + D P + KR+ R R + ++ E+ + +L Sbjct: 366 GNIMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFHTFLEQSLPVKDHYLA 425 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +CHI+ + V + ++ Sbjct: 426 Q-----GKCHIISAVPPPGEVFEVVKKVL 449 >gi|304316980|ref|YP_003852125.1| guanylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778482|gb|ADL69041.1| guanylate kinase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 203 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 68/219 (31%), Gaps = 49/219 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N GL I G GAGK T L + V TR+P E + Sbjct: 3 NKGLLIVVSGPSGAGKGTVCKALLKKDNNLKLSVSMTTRKP---RNGEVDGENYFFTTTE 59 Query: 61 EFGAEAE--AIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +F E ++ A D+ + ++ + EG ++ Sbjct: 60 KFKTLIENNMLLEWAKVYDNYYGTPKEFVQKNIDEGHDVI-------------------- 99 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER--KDVMIH 170 L +D + V++ P+ I LP + R++ R + E L F+ +++ Sbjct: 100 LEIDIQGALKVKDKYPEGVFIFILPPSMEELKNRIKKRGTETEEEILKRFKSAYEEINFV 159 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +++ IL I+ Sbjct: 160 SRY-------------NYVVIN--DDVDLAVDKILAIIK 183 >gi|254295415|ref|YP_003061438.1| uridine kinase [Hirschia baltica ATCC 49814] gi|254043946|gb|ACT60741.1| Uridine kinase [Hirschia baltica ATCC 49814] Length = 229 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 53/182 (29%), Gaps = 23/182 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG-------------TPAA 47 MN I+ G G+GK+T L L V + E Sbjct: 1 MNKPYMIAITGGSGSGKSTLAQALLDKLGED--KVLLMGEDNYYKPREHQHPDAPLWSMK 58 Query: 48 EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 E V + EA + A + + + DR +D + Sbjct: 59 EMEERVDFDDPASKNMDMYEAHLVALRQGRTISQPVYDFTKH------DR-IDGAEKVLS 111 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + +L + S + D TI ++ P D+ L R R + LD + + Sbjct: 112 PPPIIVCEGVHTLSDKSYFNLF-DLTIFVETPADLRLARRIERDVNERNRDLDRVLAQYL 170 Query: 168 MI 169 Sbjct: 171 NF 172 >gi|14591073|ref|NP_143148.1| putative kinase [Pyrococcus horikoshii OT3] gi|6831730|sp|O58998|KAD6_PYRHO RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|3257673|dbj|BAA30356.1| 180aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 180 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 59/216 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFG 63 + I+ G G GKTT LL + L + + E G R V DE Sbjct: 1 MLIAITGTPGVGKTTVAKLLAKKLNYEYVSLKDFALEKGCG------RRV-----NDEVE 49 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E + + + R ++GK + D Sbjct: 50 VEIDELAYFIERE-----------LKGKNAVLDGH------------------------- 73 Query: 124 SVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + +MP D ++L + +R++ R RE E + + + L A Sbjct: 74 -LSHLMPVDLVVVLRAHPKLIGERLRERGYDREKIG----ENVEAELVDAV----LIEAI 124 Query: 183 NQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + + VD+ S + V I++++ ++KRV Sbjct: 125 EEHENVIEVDTTNKSPEDVVEEIVSLINSGIKKRVG 160 >gi|292669825|ref|ZP_06603251.1| guanylate kinase [Selenomonas noxia ATCC 43541] gi|292648622|gb|EFF66594.1| guanylate kinase [Selenomonas noxia ATCC 43541] Length = 199 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 62/203 (30%), Gaps = 35/203 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----GGTPAAEAARHVLLS 56 M GL I G G GK T L +TREP + + A R Sbjct: 1 MKKGLLIVISGASGTGKGTVCKEL------------LTREPAIAYSISATSRAPREGEQD 48 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 F E A + + + A R ++ Sbjct: 49 GREYYFRTREEFEAMIADGAFLEYADVYGN-----------YYGTPLAPIEVRRAAGEDI 97 Query: 117 LDSLQ---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF--ERKDVMI 169 L + ++V E PD T I LP + +R+ R + E + R ++++ Sbjct: 98 LLEIDTQGALNVMERCPDGTFIFLLPPSYEELCRRITGRGTESEESIARRLAAARDEILL 157 Query: 170 HEKRRQIFL-DIARNQPDRCHIV 191 ++ R L D +R + Sbjct: 158 GKRYRYAVLNDTVEAATERIRTI 180 >gi|227889189|ref|ZP_04006994.1| deoxyguanosine kinase [Lactobacillus johnsonii ATCC 33200] gi|268320242|ref|YP_003293898.1| deoxynucleoside kinases 2 [Lactobacillus johnsonii FI9785] gi|227850418|gb|EEJ60504.1| deoxyguanosine kinase [Lactobacillus johnsonii ATCC 33200] gi|262398617|emb|CAX67631.1| deoxynucleoside kinases 2 [Lactobacillus johnsonii FI9785] Length = 224 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ +L ++L G P E+ +L + Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSL 120 A + F R I+ AL + +L DR + + +Q D + +D+ Sbjct: 51 AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTY 105 Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169 E+ + +M PD + +D+ D LKR+Q R E D E Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160 Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 +++ + + P +D Q V I+ + E+ Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKLDFMASEEDRQEVLNQIVAKLKEM 211 >gi|159114529|ref|XP_001707489.1| Hypothetical protein GL50803_13091 [Giardia lamblia ATCC 50803] gi|157435594|gb|EDO79815.1| hypothetical protein GL50803_13091 [Giardia lamblia ATCC 50803] Length = 343 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 21/183 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I +G GAGK+T LK++L + ++ + E + L Sbjct: 63 RIIVVDGPIGAGKSTFCKHLKKYLIDQGFEATIIEEAVADNHFGQNGGITLEEYYK--NP 120 Query: 65 EAEAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQ 113 A F A + + ++ DR+L S+ A+ G Q Sbjct: 121 RELAFQFQEQVVHALGKQLLHCRFAEEYQQYDFIIFDRWLPSTSAFILFKMSDGYITKEQ 180 Query: 114 HLFLDSL--QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-----ESACLDYFERKD 166 +L L + ++P + + + +++R S E LD R+ Sbjct: 181 GQYLHYLIDHYMLRAGILPAFHVRFAIDPAVCEDHIKDRASDDPHRLCEVDALDTI-RQT 239 Query: 167 VMI 169 Sbjct: 240 NEF 242 >gi|329668132|gb|AEB94080.1| deoxyguanosine kinase [Lactobacillus johnsonii DPC 6026] Length = 224 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ +L ++L G P E+ +L + Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120 A + F R I+ AL + +L DR + + +Q D + +D+ Sbjct: 51 AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATTEEVDTY 105 Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169 E+ + +M PD + +D+ D LKR+Q R E D E Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160 Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 +++ + + P +D Q V I+ + E+ Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKLDFIASEEDRQEVLNQIVAKLKEM 211 >gi|330993869|ref|ZP_08317801.1| Adenylate kinase [Gluconacetobacter sp. SXCC-1] gi|329759137|gb|EGG75649.1| Adenylate kinase [Gluconacetobacter sp. SXCC-1] Length = 219 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 40/240 (16%), Positives = 78/240 (32%), Gaps = 55/240 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I F G GAGK T L+ Q D+ +P + + ++ + Sbjct: 3 IIFLGPPGAGKGTQSKRLEERYGIAQISTGDMLRAEVAADSPLGQQVKTIMAEGRLVPDD 62 Query: 64 AEAEAIVFAAARLDHVENVIR-PALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + A +E IR P +G + D F R +Q LD++ Sbjct: 63 ------LIIAM----IEKRIRQPDCAKGF--ILDGF---------PRTRAQAEALDTM-- 99 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFER----------KDVMIH 170 ++ D ++LD+ D R+ RY+ + D F+R Sbjct: 100 LARSGQHIDAVLLLDVDEDALADRIAGRYTCAKCGAGYNDVFKRPKVEGTCDVCGGHEFI 159 Query: 171 EK---RRQI-------FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + RR+ + ++ + R + +D +V + ++ + +K Sbjct: 160 RREDDRRETVAARLKTYRELTAPILPYYEEEKRLYRIDGMADIDAVTQEVFAVIDRITKK 219 >gi|241668611|ref|ZP_04756189.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877145|ref|ZP_05249855.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843166|gb|EET21580.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 222 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 41/246 (16%), Positives = 68/246 (27%), Gaps = 59/246 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKN----YDVHVTREPGGT-----PAA 47 MN+ I+ +G G GK T L ++ L G Sbjct: 1 MNNSKIITVDGPSGVGKGTLSKKLAKYFDYKLLDSGAIYRIAALHCYNAGANLDNQDDVC 60 Query: 48 EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 + L+ ++ A + L + AY Sbjct: 61 DKLES--LNISFKVQNDSIIVLLNNADVTKAIRTEQTGMLAS-----------KTSAYPK 107 Query: 108 ERDSSQHLFLDSLQEISVQE------------VMPDC--TIILDLPVDIGLKRVQNRYS- 152 R L + V PD LD ++ R Q RY Sbjct: 108 VRQMLHDKML----SFATDAGLVADGRDMGTVVFPDAKYKFFLDASSEV---RAQRRYDE 160 Query: 153 -LRESACLDYF----ERKDVMIHEKRRQIFLDIARNQP-DRCHIVD-SAHSFQSVATNIL 205 L + D++ + + ++ R +A +P D +VD S S + V +L Sbjct: 161 LLTKGENPDFYKIKNDIEQRDFQDRNR----KVAPLKPADDAILVDTSNLSIEEVFQKVL 216 Query: 206 NIVWEL 211 N + L Sbjct: 217 NHINNL 222 >gi|116630403|ref|YP_819556.1| deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323] gi|116095985|gb|ABJ61137.1| Deoxynucleoside kinase [Lactobacillus gasseri ATCC 33323] Length = 225 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ +L ++L G P E+ +L + Sbjct: 5 IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 51 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120 A + F R I+ AL + +L DR + + +Q D + +D+ Sbjct: 52 AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATKEEVDTY 106 Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169 E+ + +M PD + +D+ D LKR+Q R E D E Sbjct: 107 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 161 Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 +++ + + P +D Q V I+ + E+ Sbjct: 162 YKRLLRYYKPWYEKYDYSPK--MTIDGDKFDFMASEEDRQEVLNQIVAKLKEM 212 >gi|312795195|ref|YP_004028117.1| Deoxyguanosine kinase [Burkholderia rhizoxinica HKI 454] gi|312166970|emb|CBW73973.1| Deoxyguanosine kinase (EC 2.7.1.113) [Burkholderia rhizoxinica HKI 454] Length = 249 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 15/160 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ EG G GKTT + L + P A+ Sbjct: 42 YLVIEGPIGVGKTTLATQLATRWSMQTLLERAADNPF-------LERFYHDNARYALPAQ 94 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQE 122 + ++ + + I A G L D FL D +A D L+ Sbjct: 95 LDFLL----QRETQMRAIADARQRGTPLAAD-FLPQKDELFARLTLPDDEFTLYRALAAR 149 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + + PD I L + R+Q R E+ D + Sbjct: 150 VPLARPAPDLVIYLQASPETLFARIQKRAIAMETHITDAY 189 >gi|3170607|gb|AAC27927.1| RNA guanylyltransferase [Crithidia fasciculata] Length = 697 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 67/207 (32%), Gaps = 43/207 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + + + G P E + V D FG EA+ Sbjct: 143 GCRGSGKTTQAVNVAERYHLLHLSSGDMFKEGKQPYVEVEQAV-----KDHFGPEAK--- 194 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R I+L DRF+ + + +L +P Sbjct: 195 ---DRQY------------NGIVL-DRFV-------ATGEMDAYYLQAALN--VCALPVP 229 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRR-QIFLDIARNQPDRC 188 L L G+KR Q R + A + E++ + Q++ I C Sbjct: 230 -IVFWLQLDPKEGIKRAQQRGDQKGGADHWRYVEQRAQAM---VADQVYKKIGVLHTIDC 285 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKR 215 + +D+ H V I +I+ L R Sbjct: 286 NAIDARH----VWDRIHSIINGLFPTR 308 >gi|325126634|gb|ADY85964.1| Deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 220 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 39/171 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L + L + E P +L + Sbjct: 10 IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 57 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111 ++ +E + A + DR +D+ A YQ Sbjct: 58 -FLLNTYFLNKRLEEINAAAGNRND--VLDRSIYEDLLFFNMNVDNGVAAPTEYQIY--- 111 Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H +D++ E PD I + + +D LKR+ R RE LD Sbjct: 112 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRG--REFEQLD 158 >gi|12044959|ref|NP_072769.1| guanylate kinase [Mycoplasma genitalium G37] gi|255660129|ref|ZP_05405538.1| guanylate kinase [Mycoplasma genitalium G37] gi|3844696|gb|AAC71325.1| guanylate kinase [Mycoplasma genitalium G37] gi|166078976|gb|ABY79594.1| guanylate kinase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 189 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 25/178 (14%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCG 58 MN+ G G G GK+T + L + + Y + T E + Sbjct: 1 MNNQGRIFVITGPSGVGKSTLVKALLDHFKEQLFYSISATTRKKRISEKEGIDYFFKDKD 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + +A + A +H ++ S A Q + L L+ Sbjct: 61 EFENLIKQDAFIEWACYNNHYYGTLK-----------------SQAEQAIKSGIN-LMLE 102 Query: 119 SLQEISVQ--EVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + ++Q P +++ + LKR++ R E+ E+ + + Sbjct: 103 IEYQGALQVKSKYPHNVVLIFIKPPSMQELLKRLKKRNDEDETTIKKRLEQAKIEFQQ 160 >gi|325293048|ref|YP_004278912.1| hypothetical protein AGROH133_06534 [Agrobacterium sp. H13-3] gi|325060901|gb|ADY64592.1| hypothetical protein AGROH133_06534 [Agrobacterium sp. H13-3] Length = 188 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 64/207 (30%), Gaps = 53/207 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREP---GGTPAAEAARHVLLSCGVDEFGA 64 EG+ GAGKT+ + LQ++ + V RE G E L + Sbjct: 17 IEGVSGAGKTS----VATELQQRGFHVIHGDRELAYKGDPETGETMDVALFQGDDTKI-- 70 Query: 65 EAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A H+ NV +R + + + + + + F+D E Sbjct: 71 -------AFRHRHHIWNVEKVRQLVADQEHAVT---------FFCGGSRNFRRFIDLFDE 114 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI-- 180 +LD+ L+R+ R L RQ L + Sbjct: 115 ----------VFVLDVDAATLLRRLAARPEDEFGGNL------------AERQFVLQLHA 152 Query: 181 -ARNQPDRCHIVDSAHSFQSVATNILN 206 + P +DS+ S V +IL Sbjct: 153 TKEDLPVGASAIDSSRSLGVVVDDILA 179 >gi|37747996|gb|AAH59563.1| Guk1 protein [Danio rerio] Length = 197 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 39/222 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M+ + G GAGK+T + L + + + V H TR P H + Sbjct: 1 MSGPRPVVLSGPSGAGKSTLLKRLMKEYEGVFGFSVSHTTRNPRPGEEDGKDYHFVTKEK 60 Query: 59 VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + E + E I F+ ++ I + I + D + Sbjct: 61 MQEGIDKDEFIENAEFSGNMYGTSKSSIEDVQAQNLICILD------------------V 102 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ I ++ P I + + +I KR+++R + E + E + Sbjct: 103 DIQGVRNIKKTDLNP---IYISIQPPSMEILEKRLRDRQTETEDSLQKRLEAARID---- 155 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +++++ +P IV + + +++ E ++K Sbjct: 156 -----MELSK-EPGVFDIVIVNDDLEEAYEKLKSVLIEEIEK 191 >gi|238852757|ref|ZP_04643163.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4] gi|282850736|ref|ZP_06260111.1| deoxynucleoside kinase [Lactobacillus gasseri 224-1] gi|311111600|ref|ZP_07712997.1| deoxyguanosine kinase [Lactobacillus gasseri MV-22] gi|238834607|gb|EEQ26838.1| deoxyadenosIne kinase [Lactobacillus gasseri 202-4] gi|282558144|gb|EFB63731.1| deoxynucleoside kinase [Lactobacillus gasseri 224-1] gi|311066754|gb|EFQ47094.1| deoxyguanosine kinase [Lactobacillus gasseri MV-22] Length = 224 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 78/233 (33%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ +L ++L G P E+ +L + Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYENPKKY 50 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSL 120 A + F R I+ AL + +L DR + + +Q D + +D+ Sbjct: 51 AFLLQVYFLNTRFQS----IKSALTDDNNVL-DRSIYEDALFFQMNADIGRATKEEVDTY 105 Query: 121 QEISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMI 169 E+ + +M PD + +D+ D LKR+Q R E D E Sbjct: 106 YEL-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DY 160 Query: 170 HEKRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 +++ + + P +D Q V I+ + E+ Sbjct: 161 YKRLLRYYKPWYEKYDYSPK--MTIDGDKFDFMASEEDRQEVLNQIVAKLKEM 211 >gi|325270891|ref|ZP_08137478.1| deoxynucleoside kinase [Prevotella multiformis DSM 16608] gi|324986688|gb|EGC18684.1| deoxynucleoside kinase [Prevotella multiformis DSM 16608] Length = 204 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 30/195 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GKTT ++L +R + + + + + Sbjct: 3 IAIAGNIGSGKTTLTTMLA---RRYGWKPRFESVDYNPYLEDYYKDI------KRWSFPM 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118 E D +E IR G+ ++ DR + ++YA D +++ Sbjct: 54 EVFFLKERFRDLLE--IR---QSGESVVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 ++++ PD I L V + ++ R E LDY E + E R + Sbjct: 109 LFEDMTDAVRFPDLMIYLRSSVSHLVSNIEKRGREYEQKMPLDYLESLNRRYDEFIRDKY 168 Query: 178 LDIARNQPDRCHIVD 192 R +D Sbjct: 169 -------KGRVLTID 176 >gi|170079112|ref|YP_001735750.1| shikimate kinase [Synechococcus sp. PCC 7002] gi|169886781|gb|ACB00495.1| shikimate kinase [Synechococcus sp. PCC 7002] Length = 186 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 6/83 (7%) Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 TI LD+PV I ++R+++ S +D ERK + ++RR + + D + Sbjct: 101 LTIWLDVPVPILVERLRSDTSRPLLQNVD-LERKLTQLLQQRRSRY-----AEADLHIQI 154 Query: 192 DSAHSFQSVATNILNIVWELVQK 214 ++VA +I+ + +++K Sbjct: 155 PGNRPPRAVAEDIIAQIPSVLRK 177 >gi|159114537|ref|XP_001707493.1| Hypothetical protein GL50803_32674 [Giardia lamblia ATCC 50803] gi|157435598|gb|EDO79819.1| hypothetical protein GL50803_32674 [Giardia lamblia ATCC 50803] Length = 366 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 12/165 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I +G GAGK+ L Q V E G A + L + A Sbjct: 72 RMIVVDGPIGAGKSLFCRRLVEHAQDSGLKAVVIEEVVGLECFSAY-GITLDEYYRDPHA 130 Query: 65 EAEAIVFAAARL---DHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHL 115 A A +E + +++ DR+L S+ A+ +G Q + Sbjct: 131 NAYRFQLAVTHALADQLLEYRFTDKYKDYDLVIFDRWLPSTSAFVLFQVQEGHITGRQAM 190 Query: 116 FLDSLQEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 +L L ++ + ++P + I +R+ R + E Sbjct: 191 YLHYLIDVYMSYAGILPATHVRFATDPLICAQRIVQRAAEEEHRQ 235 >gi|150383505|sp|Q28H12|KCY_XENTR RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK Length = 196 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 65/223 (29%), Gaps = 56/223 (25%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ F G GAGK T + + A + R Sbjct: 4 FVVFVLGGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----- 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117 +I + +G+I+ L R ++ + A G + Sbjct: 48 -------------QYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGF 94 Query: 118 ----DSLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 D+LQ D + D + ++R R + + + + Sbjct: 95 PRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL--- 148 Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 EKR Q +L R + + VD++ S V T + +I Sbjct: 149 EKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDI 191 >gi|254445986|ref|ZP_05059462.1| adenylate kinases subfamily, putative [Verrucomicrobiae bacterium DG1235] gi|198260294|gb|EDY84602.1| adenylate kinases subfamily, putative [Verrucomicrobiae bacterium DG1235] Length = 388 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 51/224 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I+ G GAGK T L ++ TP E AR ++ + G+ Sbjct: 4 IALFGPPGAGKGTQSERLVEDYNLHYISTGEILRKEMAEKTPLGEEARSIIAAGGLVSD- 62 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + +I + + +Q + +Q Sbjct: 63 -------------EIIVQIIEKFITDN--------------HQAKGFLFDGFPRTYIQAY 95 Query: 124 SVQEVMPDC----TII--LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++ +M T + L +P ++ ++R+ R + + +V+I + R+ + Sbjct: 96 ILEGLMIKLHSSLTCLINLQVPEEVSVERLLQRGKSSGRSDDN-----EVVIRNRLRE-Y 149 Query: 178 -------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 L+ + + CH D+ S +V +I +V + ++K Sbjct: 150 NEKTLPVLNFYK-EKGLCHDADATASIDAVYESIKEVVEQELRK 192 >gi|320160435|ref|YP_004173659.1| adenylate kinase [Anaerolinea thermophila UNI-1] gi|319994288|dbj|BAJ63059.1| adenylate kinase [Anaerolinea thermophila UNI-1] Length = 220 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 60/240 (25%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I G GAGK T + + + T + R L + E G Sbjct: 4 YIVLLGPPGAGKGTQATQIVQ-----------TFGLAHVSTGDLFRENLRNQ--TELGQL 50 Query: 66 AEAIVFAA------ARLDHVENVI-RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 A + + A + V I RP +G +L D F + + + L Sbjct: 51 AASYMNAGKLVPDDVTIAMVRERITRPDCAQG--VLFDGFPRT-----VAQADALSAMLA 103 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS--------------LRESACLDY--- 161 L DC + +P ++ ++R+ R S ++ D Sbjct: 104 ELSGKV------DCVPYISVPAEVLVERLSGRISCPTCGRVYHVTNNPPKQPGVCDADGT 157 Query: 162 --FERKDV--MIHEKRRQIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVWEL 211 +R+D KR + +L + +R + +D S + V+ ILN + ++ Sbjct: 158 PLIQREDDKPETVRKRIEEYLKNTAPLIDYYRERQLLVEIDGTQSIEVVSQQILNAIRKV 217 >gi|303235597|ref|ZP_07322204.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gi|302484044|gb|EFL47032.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length = 370 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V + E ++ + Sbjct: 11 MKK---IVLTGGPCAGKTTALVKIMEHFSSIGYKVFIIPELPTLFLQAGMDYLTDNKQFF 67 Query: 61 EFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A + A R + I+ + +++CDR AY Sbjct: 68 YEGEKATLEMQIAMEDRFQRMAETIK----QPVLMVCDRGTMDISAYM 111 >gi|301054092|ref|YP_003792303.1| hypothetical protein BACI_c25260 [Bacillus anthracis CI] gi|300376261|gb|ADK05165.1| hypothetical protein BACI_c25260 [Bacillus cereus biovar anthracis str. CI] Length = 186 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 70/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN+ I+ + G GKTT L L + + Sbjct: 1 MNNKTKIITIAAVSGGGKTTVTERLTEKLTNS-------------------KALYFDRYN 41 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + ++ E V+ P + + + L+ D S+ Y Sbjct: 42 FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 92 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 140 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEELYR 179 >gi|297799466|ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata] Length = 758 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 50/215 (23%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPG-GTPAAEAARHVLLSCGVDE 61 FI+F G G+GK T + ++ + RE T +++ + Sbjct: 54 FITFVLGGPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVP 113 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +I+ L D + Sbjct: 114 --------------SEVTVKLIQKELES-----SD----------NRKFLIDGFPRTEEN 144 Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ + ++ PD + D P + +KRV NR R ++ +KR +IF Sbjct: 145 RVAFERIIRADPDVVLFFDCPEEEMVKRVLNRNQGRIDD--------NITTMKKRLKIFN 196 Query: 179 DIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 + R + + +++ + + ++L I Sbjct: 197 ALNRPVIDYYKNKGKLYTINAVGTVDDIFQHVLPI 231 >gi|291319954|ref|YP_003515212.1| deoxyguanosine kinase [Mycoplasma agalactiae] gi|290752283|emb|CBH40254.1| Deoxyguanosine kinase [Mycoplasma agalactiae] Length = 220 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/225 (15%), Positives = 67/225 (29%), Gaps = 36/225 (16%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQ--------RKNYDVHVTREPGGTPAAEAARHV 53 + I GI G +GK+T + L + ++ +V T E ++ Sbjct: 1 MLI---GISGMISSGKSTLTAKLHKHFNTSLMLKEYDEDSEVFNTF---LKWLYEKQPNL 54 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-DSS 112 + + + + + DRF Y + Sbjct: 55 TIGFQSYVVENHTTKLSELIDEFNKLNKNWET-----DHIFLDRFSIEHYIFANVNLRPK 109 Query: 113 QHLFLDSLQEISVQEVM----PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +LD + + PD I LD+ + KR+ R E +D F + Sbjct: 110 GQNYLDGYDALFTHLITKDETPDIAIYLDMSWETFHKRIFERGRQVE---IDNF-YANEE 165 Query: 169 IHEKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208 + ++ D+ A I+++ + V L I+ Sbjct: 166 YFKTLYNLYKDLFIKQAEKFNLEYRIIETDNLNEDEVFEKALEII 210 >gi|220679591|emb|CAX13613.1| guanylate kinase 1 [Danio rerio] Length = 197 Score = 46.6 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 39/222 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M+ + G GAGK+T + L + + + V H TR P H + Sbjct: 1 MSGPRPVVLSGPSGAGKSTLLKRLMKEYEGVFGFSVSHTTRNPRPGEEDGKDYHFVTKEK 60 Query: 59 VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + E + E I F+ ++ I + I + D + Sbjct: 61 MQEGIDKDEFIENAEFSGNMYGTSKSSIEDVQAQNLICILD------------------V 102 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++ I ++ P I + + +I KR+++R + E + E + Sbjct: 103 DIQGVKNIKKTDLNP---IYISIQPPSMEILEKRLRDRQTETEDSLQKRLEAARID---- 155 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +++++ +P IV + + +++ E ++K Sbjct: 156 -----MELSK-EPGVFDIVIVNDDLEEAYEKLKSVLIEEIEK 191 >gi|159488592|ref|XP_001702290.1| flagellar adenylate kinase [Chlamydomonas reinhardtii] gi|158269460|gb|EDO95880.1| flagellar adenylate kinase [Chlamydomonas reinhardtii] Length = 560 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 71/218 (32%), Gaps = 55/218 (25%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K + VH+ A + R + S E G + Sbjct: 78 IVFVLGGPGSGKGTQCDQIKEEYE----CVHL-------SAGDLLRAEVKSGS--EVGQK 124 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 125 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 164 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD ++ +MP T + D P + KR+ R R D ++ ++ Sbjct: 165 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLDQS 223 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +L +CH++ + + V + + Sbjct: 224 LPVKDHYLAQ-----GKCHVISAVPPPKEVYGKVKAAL 256 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 55/210 (26%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K +YD A + R + S E G + Sbjct: 283 IVFVLGGPGSGKGTQCDKIKA-----DYDCVHLS------AGDLLRAEVKSGS--EVGQK 329 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 330 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 369 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD ++ +MP T + D P + KR+ R R D ++ ++ Sbjct: 370 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFHTFLDQS 428 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + +L +CH++ + + V Sbjct: 429 LPVKDHYLTQ-----GKCHVISAVAAPDDV 453 >gi|224058137|ref|XP_002192284.1| PREDICTED: similar to cytidylate kinase [Taeniopygia guttata] Length = 315 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 63/218 (28%), Gaps = 57/218 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A + R G Sbjct: 129 GGPGAGKGTQCARIVEK-----------YGYTHLSAGDLLRDERKRPGS----------- 166 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DS 119 +I + EG+I+ L R +D + A Q + D+ Sbjct: 167 -------QYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDN 219 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ + + D + D +I + R R + + + + EKR Sbjct: 220 LQGWTKTMDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNR---ESL---EKRINT 273 Query: 177 FL-------DIARNQPDRCHIVDSAHSFQSVATNILNI 207 +L D+ + VD++ S V ++ I Sbjct: 274 YLQSTKPIIDLYERM-GKVRKVDASKSVDEVFEKVVQI 310 >gi|154305500|ref|XP_001553152.1| hypothetical protein BC1G_08519 [Botryotinia fuckeliana B05.10] gi|150853306|gb|EDN28498.1| hypothetical protein BC1G_08519 [Botryotinia fuckeliana B05.10] Length = 204 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 68/236 (28%), Gaps = 65/236 (27%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F G G GK T LL + L ++ +H + R L Sbjct: 8 FFVL-GPPGVGKGTQCMLLAQ-LSSRHRHIHHIS------IGDILRSELQKPSSKWAS-- 57 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKI------------LLCDRFLDSSYAYQGERDSSQ 113 +IR + EG+ + R D+ + Sbjct: 58 ----------------IIRANMAEGRTGPPEMSVSMLQEAIARRSEDTKPGKEMVFLIDG 101 Query: 114 -HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + + P + L P+ I +R+ +R + + ++H++ Sbjct: 102 FPRSIYPISLFESTVCAPSLVLSLHCPLQILQERLLSR-----AKSSSRIDDGVEIMHKR 156 Query: 173 ----------RRQIFLD---IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +A +D++ S + V ++ V +++ + Sbjct: 157 FEQHVCATGPVIENYRERGLLAE--------IDASRSVEEVHRDVWGAVEKILGEH 204 >gi|322490716|emb|CBZ25979.1| putative adenylate kinase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 220 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 68/236 (28%), Gaps = 60/236 (25%) Query: 7 ISFEGIEGAGKTTHISLLKR-----FLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGV 59 I G G+GK T LL + L N + + R P G AE L Sbjct: 5 IILFGPPGSGKGTVSHLLVKEYGFVHLSAGNLLREEVLKRSPLGLRCAEMMSEGSLIPDE 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF--L 117 L+C+R S A Q L Sbjct: 65 LVVD-----------------------------LVCNR--LSDQAVQKHGILLDGFPRTL 93 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164 + + + D I LD+ ++ L R +R + + D + Sbjct: 94 RQAEVLRTRGFKFDMMIFLDVSPEVLLDRCLSRRLDPVTGRIYNLKSDPPSLDIVDRLQI 153 Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + HE+R Q++ + + D VD+ + V + + + +Q Sbjct: 154 RSDDTKEKHERRMQVYNSQKATLIAHYSDIIIEVDAEPEIKVVFKELQMKINKRLQ 209 >gi|147905317|ref|NP_001082709.1| UMP-CMP kinase [Xenopus laevis] gi|111185528|gb|AAH54975.2| Cmpk1 protein [Xenopus laevis] Length = 216 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 60/217 (27%), Gaps = 55/217 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A + R Sbjct: 33 GGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----------- 70 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + +GKI+ L R ++ + A + D+ Sbjct: 71 -------QYGELIESYIRDGKIVPVEITISLLQRAMERTMAIDANKHKFLIDGFPRNEDN 123 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 LQ D + D + ++R R + + + + EKR Q Sbjct: 124 LQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL---EKRIQT 177 Query: 177 FLD----IARNQPDR--CHIVDSAHSFQSVATNILNI 207 +L I R VD++ S V T + NI Sbjct: 178 YLQSTRPIIDLYEKRGKVRKVDASKSVDEVFTKVQNI 214 >gi|15835023|ref|NP_296782.1| adenylate kinase [Chlamydia muridarum Nigg] gi|270285189|ref|ZP_06194583.1| adenylate kinase [Chlamydia muridarum Nigg] gi|270289208|ref|ZP_06195510.1| adenylate kinase [Chlamydia muridarum Weiss] gi|301336585|ref|ZP_07224787.1| adenylate kinase [Chlamydia muridarum MopnTet14] gi|9910710|sp|Q9PKR0|KAD_CHLMU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|7190446|gb|AAF39261.1| adenylate kinase [Chlamydia muridarum Nigg] Length = 253 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 74/239 (30%), Gaps = 50/239 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDE 61 LF+ G G+GK T LL L ++ D+ TP + + L G Sbjct: 6 LFLIIMGAPGSGKGTQSKLLASQLSLQHISSGDLLRNAVSQNTPLGQEIKS-YLDQGKLL 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +V + ++ + + L+ K+ R + + G + L L Sbjct: 65 PDQLVWKLVH-----EKLDELQQDTLLR-KLSFLSRSENGAI-LDGFPRTVAQAKL--LN 115 Query: 122 EISVQEVMPD-CTIILDLPVDIGLKRVQNRY----------------------------- 151 E + PD I+LD+ + L R+ +RY Sbjct: 116 EF-LCSYFPDYKIILLDISDEEVLNRLTSRYICPSCQGIYNKQQGFSRCPKCLVELTRRS 174 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 LD + + + + R +D+ Q V NIL+ + E Sbjct: 175 DDTPEVILDRIQTYKQET-QPVLDYYAAL-----QRLITIDANAPTQQVFKNILDALPE 227 >gi|326335220|ref|ZP_08201416.1| deoxynucleoside kinase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692628|gb|EGD34571.1| deoxynucleoside kinase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 374 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 21/175 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ + L K + E P E F Sbjct: 181 YITVEGNIGAGKTSLATRLAGDFSGK----LLLEEFLSNPFLEDFYK-----EPQRFALA 231 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDS-SYAYQGERDSSQHLFL-DSLQE 122 E + F R ++ V+ A + KI L+ D + S S + E ++ L + + Sbjct: 232 TE-LNFLKDRYKQLQKVL--ANKKEKIPLIAD-YALSKSLIFASETLGAKEYTLYEEIFY 287 Query: 123 ISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRE----SACLDYFERKDVMIHEK 172 + + + PD I L +I L+ +Q R E L+ ER + +K Sbjct: 288 LFFERMEKPDLYIYLHQNTNILLQNIQKRGRSFETPISKEYLERIERSYLSFLKK 342 >gi|291401643|ref|XP_002717078.1| PREDICTED: deoxycytidine kinase [Oryctolagus cuniculus] Length = 375 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 38/231 (16%) Query: 15 AGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------LLSCGVDEF 62 AGK+T +++LK+ + ++V V R + + +L ++ Sbjct: 147 AGKSTFVNILKQVCED--WEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNVLQMMYEKP 204 Query: 63 GAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + A R +++ P L + + DR++ +S Y+ + + Sbjct: 205 ERWSFTFQSYACLSRIRAQLASLNGKLKDAENPVLFFERSVYSDRYIFASNLYESDCMNE 264 Query: 113 QHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER-- 164 + D + Q + D I L + L R+ R E L+Y E+ Sbjct: 265 TEWTIYQDWHDWMNNQFGQNLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLH 324 Query: 165 ---KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++H + F D + P +D F+ +++ V E + Sbjct: 325 YKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKHESLVEKVREFL 372 >gi|328766376|gb|EGF76431.1| hypothetical protein BATDEDRAFT_36288 [Batrachochytrium dendrobatidis JAM81] Length = 4176 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 38/118 (32%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T LLK L + V P R LL + Sbjct: 1931 VVLVGPSGSGKSTIWRLLKNALHKTGQRLVSHITNPKAVD-----RQSLLGNMDMDTREW 1985 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + I+ A+R ++ AL ++ D +++SL + Sbjct: 1986 TDGILTYASR-----QAVKEALDVHTWIISD-------------GDIDPEWIESLNSV 2025 >gi|228934929|ref|ZP_04097760.1| hypothetical protein bthur0009_33830 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228824829|gb|EEM70630.1| hypothetical protein bthur0009_33830 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 195 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 8 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 57 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYNRKNNDRTRNRSTFEEQF 154 >gi|170034280|ref|XP_001845002.1| deoxynucleoside kinase [Culex quinquefasciatus] gi|167875635|gb|EDS39018.1| deoxynucleoside kinase [Culex quinquefasciatus] Length = 246 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 27/204 (13%), Positives = 64/204 (31%), Gaps = 20/204 (9%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64 EG G+GKTT ++ Q+ V + EP ++L Sbjct: 20 IEGNIGSGKTTFLN----HFQKFKDRVCLLTEPVEKWRDCGGVNLLDLMYKEPNRWAMPF 75 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDSLQE 122 + + + + + R+ +++ A ++ + + Sbjct: 76 QTYVTLTMLNAHQLQTDKSIKLMERS--MFSARYCFVENMLASGSLHQGMYNILQEWYEF 133 Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--RRQIFLD 179 I + D + L ++ +R+ R ES + ++ +HE F Sbjct: 134 IHANIHIQADLIVYLRTSPEVVYERMMKRARSEESCVPLKYLQELHELHENWLIHGSFPR 193 Query: 180 IARNQPDRCHIVDSAHSFQSVATN 203 A P ++D+ ++++ Sbjct: 194 AA---P--VLVLDADLDLNNISSE 212 >gi|116514927|ref|YP_813833.1| deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116094242|gb|ABJ59395.1| Deoxynucleoside kinase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 215 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 56/171 (32%), Gaps = 39/171 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L + L + E P +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111 ++ +E + A + DR +D+ A YQ Sbjct: 53 -FLLNTYFLNKRLEEINAAAGNRND--VLDRSIYEDLLFFNMNVDNGVADPTEYQIY--- 106 Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H +D++ E PD I + + +D LKR+ R RE LD Sbjct: 107 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRG--REFEQLD 153 >gi|159463624|ref|XP_001690042.1| ODA5-associated flagellar adenylate kinase [Chlamydomonas reinhardtii] gi|158284030|gb|EDP09780.1| ODA5-associated flagellar adenylate kinase [Chlamydomonas reinhardtii] Length = 657 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 71/221 (32%), Gaps = 55/221 (24%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K +Y+ A + R + S E G + Sbjct: 63 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGLK 109 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 110 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 149 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD + +MP T + D P + KR+ R R D ++ E+ Sbjct: 150 LDQAAQFE-NSIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLEQS 208 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +L +CH++ + + V + ++ L Sbjct: 209 LPVKDHYLAQ-----GKCHVISAVAAPDDVYGKVKVVLEGL 244 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 71/221 (32%), Gaps = 55/221 (24%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K +Y+ A + R + S E G + Sbjct: 471 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGQK 517 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 518 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 557 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD ++ +MP T + D P + KR+ R R D ++ E+ Sbjct: 558 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFHTFLEQS 616 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +L +CH++ + + V + + L Sbjct: 617 LPVKDHYLTQ-----GKCHVISAVAAPDDVYGKVKVALEGL 652 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 55/210 (26%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K +Y+ A + R + S E G + Sbjct: 281 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGQK 327 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 328 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 367 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD ++ +MP T + D P + KR+ R R D ++ E+ Sbjct: 368 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLEQS 426 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + +L +CH++ + + V Sbjct: 427 LPVKDHYLAQ-----GKCHVISAVPPPKEV 451 >gi|154345664|ref|XP_001568769.1| adenylate kinase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134066111|emb|CAM43900.1| putative adenylate kinase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 220 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 77/239 (32%), Gaps = 60/239 (25%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF+ G G+GK T LL + Y G+ E R G Sbjct: 3 LFVILFGAPGSGKGTVSDLLVKH-----YGFVHLS--AGSVLREEVRK------KSPLGL 49 Query: 65 EAEAIVFAAARL--DHVENVI-----RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + AI+ + + V +++ PA+ I L D F L Sbjct: 50 KCAAIMTEGNLIPDELVVDLVCNRLREPAVQAHGI-LLDGF---------------PRTL 93 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164 +E+S + D + LD+ +I L R +R + + D Sbjct: 94 RQAEELSTRGFKFDMLLFLDVSPEILLDRCLSRRLDPVTGRIYNLKSDPPPSDIVDRLLI 153 Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + H++R QI+ + + D +D+ + V + E + K++ Sbjct: 154 RPDDTKEKHKRRMQIYNNQKAALMAHYSDIIIEIDADPEIKVVFQ----TLQERINKQL 208 >gi|289829609|ref|ZP_06547164.1| thymidylate kinase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 49 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTR 39 +I EG+EGAGKTT ++ L++ ++ TR Sbjct: 5 YIVIEGLEGAGKTTARDVVVETLEQLGIRNMIFTR 39 >gi|229156146|ref|ZP_04284244.1| uridine kinase [Bacillus cereus ATCC 4342] gi|228627329|gb|EEK84058.1| uridine kinase [Bacillus cereus ATCC 4342] Length = 187 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 35/212 (16%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 2 MNKKTKIITIAAVSGGGKTTVTEGLTHKLMNS-------------------KALYFDSYT 42 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+ + ++ E V+ P + + + L+ D S+ Y Sbjct: 43 FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IILDYPFAY 92 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L Q + D TI +D P+DI + R R E+ + + K + + R+ +L+ Sbjct: 93 LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEIHNDLKHYITYA--RKAYLE 148 Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D A S + I ++ Sbjct: 149 ALHTVKPNSDIVLDGALSIDEIINQIEEELYR 180 >gi|257066817|ref|YP_003153073.1| dephospho-CoA kinase [Anaerococcus prevotii DSM 20548] gi|256798697|gb|ACV29352.1| dephospho-CoA kinase [Anaerococcus prevotii DSM 20548] Length = 200 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 78/217 (35%), Gaps = 42/217 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ +GK+T +LK K YD+ A E R ++ G + + Sbjct: 6 IVITGLIASGKSTVADILKE----KGYDLI--------SADEVNRDLIKKGGKNYIAIKN 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR------------FLDSSYAYQGERDSSQH 114 E I A D ++ + L E I+ D+ + S+ E Sbjct: 54 EPIFAPAFDGDFLD---KKKLAE--IIFNDKEKMERLNEISHANIISAIDEMVENSKEDK 108 Query: 115 LFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +F++ +++ P D +++ ++ +KR+ R + L E +D Sbjct: 109 VFIEVPLFFKIKDRFPHDLVVLVTASREVQIKRLMARDKIDYDFALKKIESQD------- 161 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++ + I+D++ +S+ I I+ Sbjct: 162 -----ELEEMKKQSDIIIDNSGDIESLRRQIEKIIKR 193 >gi|290476272|ref|YP_003469176.1| shikimate kinase II [Xenorhabdus bovienii SS-2004] gi|289175609|emb|CBJ82412.1| shikimate kinase II [Xenorhabdus bovienii SS-2004] Length = 174 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 68/210 (32%), Gaps = 52/210 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI G GAGKTT LL L Y T E ++ G Sbjct: 1 MKQTLFIV--GARGAGKTTIGKLLAEALS---YTFIDTDESIQAFCGMTIADLVEQYGWT 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F +E+ I + K ++ G + Sbjct: 56 HFRE--------------LESQILKNASQNKCVIST----------GGGMILSSENRQYM 91 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ------NRYSLRESACLDYFERKDVMIHEKRR 174 Q+ + + L P ++ +KR+ R SL + + E I +R Sbjct: 92 QQ---NGI----VVYLQAPAEVLIKRLSLNPENTQRPSLTGKSITEEIES----ILTERE 140 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 Q++ + A IVD+ S +++++ I Sbjct: 141 QLYRECAN------FIVDANSSTENISSLI 164 >gi|299778997|ref|YP_003734191.1| hypothetical protein EME08_gp041 [Enterobacteria phage IME08] gi|298105726|gb|ADI55370.1| hypothetical protein [Enterobacteria phage IME08] Length = 181 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 38/121 (31%), Gaps = 26/121 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 I +G + +GK+T I L L K Y + P + + L D+ Sbjct: 5 KPKIIVIDGPDNSGKSTLIESL---LSDKKYRLI------DFPKKINGKCISLGTDNDK- 54 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + L + + DR S+ Y G +++ L++ Sbjct: 55 ---------------ALVETLYKFLDPNFVYILDRGYPSNIVYSGFLRGEMDPYVE-LED 98 Query: 123 I 123 Sbjct: 99 W 99 >gi|294460323|gb|ADE75743.1| unknown [Picea sitchensis] Length = 223 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 65/221 (29%), Gaps = 57/221 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + A + R + S + Sbjct: 35 GGPGSGKGTQCEKIVENF---GF--------THLSAGDLLRAEIKSGSENG--------- 74 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY-------AYQGERDS---SQHLFLDSL 120 +I + EGKI+ S A Q + + Sbjct: 75 ----------TMIENMIKEGKIV------PSEVTVKLLQKAMQESENDKFLIDGFPRNEE 118 Query: 121 QEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + + P+ + + P + LKR+ NR R ++ ++ + E Sbjct: 119 NRAAFENVTGIQPEFILFFNCPEEEMLKRLLNRNQGRVDDNVETITKRFRVFSESSLPVV 178 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + +D+ S + V NI + +Q++ Sbjct: 179 NYY-----DSKGKVRKIDAVKSKEDVFENIKLLFAPFIQEK 214 >gi|238919801|ref|YP_002933316.1| hemin importer ATP-binding subunit [Edwardsiella ictaluri 93-146] gi|238869370|gb|ACR69081.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 260 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 35/213 (16%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFG 63 + G GAGK+T + LL +L+ + +E PA + A R ++ Sbjct: 34 LVVIIGPNGAGKSTLMRLLAGYLRPDSGRCTLLGKELAAWPAQQLAQRRAVMRQHSALAF 93 Query: 64 AEAEAIVFAAARL-------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + V A R ++ V++ G + L DR + + + Sbjct: 94 PFSVREVIAMGRAPCPEGQQQALQAVMQ---QSGCLALADRDYRTL----SGGEQQRVQL 146 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM----IHEK 172 +L ++ P + LD L ++ LR + R+ + +H+ Sbjct: 147 ARALAQLWHPAPQP-RWLFLD-EPTSALDLFHQQHLLRLLHGMTR--REPLSVCCILHD- 201 Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSV 200 L++A DR ++ ++ + + V Sbjct: 202 -----LNLAALYADRILLLHQGTLVASGTPEQV 229 >gi|225710854|gb|ACO11273.1| UMP-CMP kinase [Caligus rogercresseyi] Length = 193 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 67/209 (32%), Gaps = 35/209 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + +A +L + + E I Sbjct: 11 GGPGAGKGTQCAKIVEK---------------YGFVHLSAGDLLRAERQKKGSEYGELIE 55 Query: 71 FAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 V I AL++ I+ RF + S+ + S+ + + Sbjct: 56 HHIVNGTIVPPAITCALLKNAIVSSSKTRFHIDGF---PRNQSNVDEWETSVAPLVDFKF 112 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF----LDIARNQ 184 + + D +I ++R +R + D E +KR + L + ++ Sbjct: 113 L----LFFDCKEEICVERCLSRGAAGSGRSDDNLES-----LKKRIATYMNSTLGVIKSY 163 Query: 185 --PDRCHIVDSAHSFQSVATNILNIVWEL 211 DR D++ + V ++ I E+ Sbjct: 164 ETKDRVKRADASKTVDEVFNDVQKIFDEV 192 >gi|225703318|gb|ACO07505.1| Deoxycytidine kinase [Oncorhynchus mykiss] Length = 263 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 45/250 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------A 46 M+ IS EG AGK+T + LL+ Q K+++V EP Sbjct: 18 MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEV--APEPIARWCNVQTQHSEFEELTM 73 Query: 47 AEAARHVLLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCD 96 ++ + +L ++ A A R + E + + D Sbjct: 74 SQKSGSNVLQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREAENPVQFFERSVYSD 133 Query: 97 RFLDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 R++ ++ Y+ E + + L + + + D I L + ++R+ R Sbjct: 134 RYIFAANLYESECLNETEWSIYQDWHGWLHKQFGKHIELDGIIYLRAAPERCMERLHRRG 193 Query: 152 SLRESA-CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHS--FQSVA-T 202 E L+Y E+ + + H+ + + N P +D V Sbjct: 194 REEEQGIPLEYLEKLHFKHESWLQHKTMCMGYKYL-NNVP--ILTLDVNEDFKVDQVKGA 250 Query: 203 NILNIVWELV 212 +++ V E + Sbjct: 251 DMVEKVKEFL 260 >gi|218904781|ref|YP_002452615.1| hypothetical protein BCAH820_3665 [Bacillus cereus AH820] gi|218534861|gb|ACK87259.1| conserved hypothetical protein [Bacillus cereus AH820] Length = 207 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 5 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 54 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151 >gi|209732798|gb|ACI67268.1| Deoxycytidine kinase [Salmo salar] gi|303664259|gb|ADM16136.1| Deoxycytidine kinase [Salmo salar] Length = 263 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 30/192 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---- 53 M+ IS EG AGK+T + LL+ Q K+++V + R + Sbjct: 18 MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNVQTQHSEFEELTVSQ 75 Query: 54 -----LLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRF 98 +L ++ A A R + E + + DR+ Sbjct: 76 KNGGNVLQMMYEKPERWAYTFQTYAFMSRVRAQMKSTNGKLREAENPVQFFERSVYSDRY 135 Query: 99 LDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 + ++ Y+ E + + L E + + D I L + ++R+ R Sbjct: 136 IFAANLYESECLNETEWSIYQDWHGWLHEQFGKHIELDGIIYLRAAPERCMERLHRRGRE 195 Query: 154 RESA-CLDYFER 164 E L+Y E+ Sbjct: 196 EEQGIPLEYLEK 207 >gi|42519874|ref|NP_965804.1| deoxyguanosine kinase [Lactobacillus johnsonii NCC 533] gi|81667315|sp|Q74HC2|DGK2_LACJO RecName: Full=Deoxyguanosine kinase; Short=DGK; Short=DGUO kinase; AltName: Full=Deoxynucleoside kinase complex I F-component gi|41584164|gb|AAS09770.1| deoxyguanosine kinase [Lactobacillus johnsonii NCC 533] Length = 224 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 79/231 (34%), Gaps = 49/231 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G GAGK++ +L ++L G P E+ +L + + Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTNPFYESVDDNPVLPLFYE--NPK 48 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQE 122 A + L+ I+ AL + +L DR + + +Q D + +D+ E Sbjct: 49 KYAFLLQVYFLNTRFRSIKSALTDDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYYE 107 Query: 123 ISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHE 171 + + +M PD + +D+ D LKR+Q R E D E ++ Sbjct: 108 L-LHNMMSELDRMPKKNPDLLVHIDVSYDTMLKRIQKRGRNYEQLSYDPTLE----DYYK 162 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + + + P +D Q V I+ + E+ Sbjct: 163 RLLRYYKPWYEKYDYSPK--MTIDGDKLDFMASEEDRQEVLNQIVAKLKEM 211 >gi|254495069|ref|ZP_05107993.1| 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase (HPPK)/deoxynucleoside kinase [Polaribacter sp. MED152] gi|85819419|gb|EAQ40576.1| 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase (HPPK)/deoxynucleoside kinase [Polaribacter sp. MED152] Length = 374 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 22/191 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ ++ K P E F E Sbjct: 179 YIAIEGNIGAGKTSLSKMMSDEFNAKIVLERFADNPFLPKFYE-------DKERFAFPLE 231 Query: 66 AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDSLQEI 123 F A R + +++ + L + ++ D ++ S + Q + ++L + ++ Sbjct: 232 MS---FLADRYQQLSDDLAQLDLFKNF-VVSDYYIFKSLIFAQITLQNDEYLLYRKMFDL 287 Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IA 181 +E+ PD + L L+ ++ R E + +K + I+ Sbjct: 288 MYKEITKPDLYVYLYQNTTRLLENIKKRGREYEQNI-------EASYLQKIHDGYKSFIS 340 Query: 182 RNQPDRCHIVD 192 Q ++D Sbjct: 341 TQQNLNTLVID 351 >gi|297820876|ref|XP_002878321.1| hypothetical protein ARALYDRAFT_486486 [Arabidopsis lyrata subsp. lyrata] gi|297324159|gb|EFH54580.1| hypothetical protein ARALYDRAFT_486486 [Arabidopsis lyrata subsp. lyrata] Length = 202 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 61/204 (29%), Gaps = 45/204 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + L + A + R + S Sbjct: 28 GGPGSGKGTQCANLVKHFS-----------YTHFSAGDLLRAEIKSGSQ----------- 65 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-----QEISV 125 F A I+ ++EG+I+ + E + +D I Sbjct: 66 FGAM--------IQSTIVEGRIVPSE-ITVKLLCKAMEESGNDKFLIDGFPRNEENRIVF 116 Query: 126 QE---VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P + D P + +R+ +R RE ++ ++ + E L I Sbjct: 117 ENVAKIEPAFVLFFDCPEEELERRIMSRNQGREDDNIETINKRFKVFVEST----LPIIS 172 Query: 183 --NQPDRCHIVDSAHSFQSVATNI 204 + +++A + V + Sbjct: 173 YYESKGKLRKINAAKPSEEVFEAV 196 >gi|228861300|ref|YP_002854323.1| deoxynucleoside kinase/thymidine kinase [Soft-shelled turtle iridovirus] gi|190889006|gb|ACE96050.1| thymidine kinase [Rana grylio virus 9506] gi|194307580|gb|ACF42310.1| deoxynucleoside kinase/thymidine kinase [Soft-shelled turtle iridovirus] Length = 195 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 80/219 (36%), Gaps = 40/219 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G GAGK+T + L+ Y+V + + L +F ++ Sbjct: 7 IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59 Query: 67 EAIVFAAARLDHVENVIRPALME--GKILLCDRFL-----DSSYAY-QGERDSSQHLFLD 118 + ++ +++ I+ A + ++++ +R + A QG+ ++H L Sbjct: 60 KIML--------IQSEIQRAAKKSDNRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLV 111 Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + E +P D I L+ P + ++R+ R E V F Sbjct: 112 QIWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF 161 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PD S + V N + ++ ++V + V Sbjct: 162 ----ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194 >gi|258648474|ref|ZP_05735943.1| guanylate kinase [Prevotella tannerae ATCC 51259] gi|260851234|gb|EEX71103.1| guanylate kinase [Prevotella tannerae ATCC 51259] Length = 187 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 77/218 (35%), Gaps = 45/218 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTP---------AAEAARHVL 54 I F G+GK+T I+ L ++ + T R P G AE R + Sbjct: 3 KIIVFSAPSGSGKSTIINYLMDQQLNLHFSISATSRPPRGKEQHGVEYYFLTAEDFRQRI 62 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 EF E + + + + L +G+ ++CD Sbjct: 63 ADGEFLEFCEVYEGRYYGTLKAE-----VDRLLAKGENVICD---------------VDV 102 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +++ I T+ + +P L+ +++R + R + + E E+ R Sbjct: 103 VGAQNIKRIYGDRA---LTVFIKVP---SLEVLRHRLTARGTDAPEVIE-------ERIR 149 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + +++ +++ + ++V + +V + + Sbjct: 150 RADYELSEADKFDATLIN--DNLETVLKSAKALVSQFL 185 >gi|163783355|ref|ZP_02178348.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159881463|gb|EDP74974.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 213 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 79/242 (32%), Gaps = 65/242 (26%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L F G GAGK T L + L T + R + Sbjct: 1 MRKNL--VFLGPPGAGKGTQAKRLAQEL---GLMHIST--------GDILREAVKKGTPL 47 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKI-----LLCDRFLDSSYAYQGERDSSQHL 115 A+ + + V + + AL+E + ++ D F R +Q Sbjct: 48 GKKAKE-----YMDKGELVPDDLIVALIEEVMPPEGGVIFDGF---------PRTIAQAE 93 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY 161 LD + +S + + D ++ D+P ++ ++R+ R + D Sbjct: 94 ALD--EMLSKKGMGIDAVVLFDVPDEVVVERLSGRRVCPSCGAVYHIKFNPPENDEVCDR 151 Query: 162 ----FERKDVMIHEKRR---QIFLDIARNQP-----DR---CHIVDSAHSFQSVATNILN 206 ++D E R +++ + +P +R +D++ + V + Sbjct: 152 CGTKLIQRDDDREEVVRNRLEVYRR--QTEPLIEYYERKGILIRLDASKEIEEVYQELKK 209 Query: 207 IV 208 +V Sbjct: 210 VV 211 >gi|110597600|ref|ZP_01385885.1| Guanylate kinase [Chlorobium ferrooxidans DSM 13031] gi|110340720|gb|EAT59197.1| Guanylate kinase [Chlorobium ferrooxidans DSM 13031] Length = 192 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 64/216 (29%), Gaps = 40/216 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G I F G GK+T L + + V TRE E + LS Sbjct: 7 RQGKLIVFSAPSGTGKSTIAKHLLERIPDIRFSVSATTREKRVGEV-EGINYYFLSRKDF 65 Query: 61 EFGAEA----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + E F + + R + G LL D Sbjct: 66 EEKIRSGGFIEHEFFFGNHYGTLLDKTREVIESGSHLLLD-------------------- 105 Query: 117 LDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 LD ++++ + P+ I P +I R++ R S E + ER + Sbjct: 106 LDVKGALNLKRLFPENSLLIFFK-PPSMEILEARLKGRESEDEESLKLRLERARLE---- 160 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L+ A + + ++V + + Sbjct: 161 -----LEYAERFDAVIVNDNLDLTVETVTEKVRKFL 191 >gi|322701069|gb|EFY92820.1| uridylate kinase [Metarhizium acridum CQMa 102] Length = 307 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 62/219 (28%), Gaps = 46/219 (21%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + L + L + +E G+ + R + + + Sbjct: 118 GGPGAGKGTQCANLVKQYGFTHLSA-GDLLRAEQERPGSQFGDLIRDYIKNGLIVPMEV- 175 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + +EN + AL RFL + LD + Sbjct: 176 ---------TIQLLENAMTEALQSNGNATKGRFLIDGF----------PRKLDQAYKFE- 215 Query: 126 QEVMPD-CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR-- 182 + V P + D P + +R+ R A + E R+ F Sbjct: 216 ESVCPARMVLFFDCPEKVMEERLLERGKTSGRADDNA---------ESIRKRFRTFIETS 266 Query: 183 -------NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +D+ + V N + E K Sbjct: 267 MPVVDYYEKQGKVVKIDATPTPDQVFANTKARLTEKFGK 305 >gi|116181662|ref|XP_001220680.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] gi|88185756|gb|EAQ93224.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51] Length = 333 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/220 (13%), Positives = 62/220 (28%), Gaps = 45/220 (20%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + L R L + ++ G+ + R + + + Sbjct: 145 GGPGAGKGTQCARLVRDYHFTHLSA-GDLLRAEQDRPGSQYGQLIRDCIKNGDIVPM-EV 202 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++ A R + I+ + L D G +E+ Sbjct: 203 TVALLENAMR-----DAIQASGGRNGKFLID----------GFPRKMDQAL--KFEEVVC 245 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182 + D P +R+ R A + E R+ F Sbjct: 246 PAK---LVLFYDCPEAEMERRLLERGKTSGRADDNA---------ESIRKRFRTFVETSM 293 Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + +R V++ + V + + +++ + Sbjct: 294 PVVDHYEKENRVVKVNATDTPDGVYADTQARLRKVLGDKF 333 >gi|325953983|ref|YP_004237643.1| deoxyadenosine kinase [Weeksella virosa DSM 16922] gi|323436601|gb|ADX67065.1| Deoxyadenosine kinase [Weeksella virosa DSM 16922] Length = 204 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 34/197 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT LL + + + + L ++ + Sbjct: 3 IAIAGNIGAGKTTLTKLLAK------------QYNWTAQFEDVDHNPYLDDFYNDMAKWS 50 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122 + F +R V+ + G ++ DR + D+ +D D Sbjct: 51 FNLQIYFLGSRFQQVKEI----RESGLNIIQDRTIYEDAHIFASNLKDMGLLSTRDYENY 106 Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + V +M PD I L + + ++Q R ES+ + + + Sbjct: 107 LRVFNLMTSFVKAPDLLIYLKASIPTLVAQIQKRGREYESSI-------SIDYLNRLNEK 159 Query: 177 FLDIARNQPD-RCHIVD 192 + N + + ++D Sbjct: 160 YNKWIDNYTEGKLLVID 176 >gi|32996721|ref|NP_872612.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like [Rattus norvegicus] gi|30171809|gb|AAP20092.1| NADH dehydrogenase 1 alpha subcomplex 10-like protein [Rattus norvegicus] Length = 355 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 20/168 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58 I+ +G +GK + L K+Y + T + S Sbjct: 60 ITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYD 119 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108 D ++ ++ A+RL + + L G+ ++ +R + S + + +G Sbjct: 120 DPKSNDGNSYRLQSWLY-ASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNRGF 178 Query: 109 RDSSQHLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ E +P I +D+PV R+Q + E Sbjct: 179 IRKQCVDHYNEIKRLTLPEYLPSHAVIYIDVPVSEIQSRIQKKGDPHE 226 >gi|49186450|ref|YP_029702.1| hypothetical protein BAS3446 [Bacillus anthracis str. Sterne] gi|165870965|ref|ZP_02215616.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167636324|ref|ZP_02394625.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|167641501|ref|ZP_02399750.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|170689496|ref|ZP_02880685.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|170709145|ref|ZP_02899571.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|177652479|ref|ZP_02934946.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190564497|ref|ZP_03017418.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I] gi|227813514|ref|YP_002813523.1| hypothetical protein BAMEG_0918 [Bacillus anthracis str. CDC 684] gi|229601121|ref|YP_002867845.1| hypothetical protein BAA_3743 [Bacillus anthracis str. A0248] gi|254686220|ref|ZP_05150079.1| hypothetical protein BantC_20500 [Bacillus anthracis str. CNEVA-9066] gi|254726014|ref|ZP_05187796.1| hypothetical protein BantA1_26745 [Bacillus anthracis str. A1055] gi|254738693|ref|ZP_05196396.1| hypothetical protein BantWNA_26309 [Bacillus anthracis str. Western North America USA6153] gi|254744749|ref|ZP_05202427.1| hypothetical protein BantKB_27750 [Bacillus anthracis str. Kruger B] gi|254753011|ref|ZP_05205047.1| hypothetical protein BantV_11086 [Bacillus anthracis str. Vollum] gi|254759282|ref|ZP_05211308.1| hypothetical protein BantA9_13321 [Bacillus anthracis str. Australia 94] gi|49180377|gb|AAT55753.1| conserved hypothetical protein [Bacillus anthracis str. Sterne] gi|164713176|gb|EDR18702.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167510583|gb|EDR85980.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|167528251|gb|EDR91028.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|170125948|gb|EDS94849.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|170666546|gb|EDT17320.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|172082153|gb|EDT67220.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190563814|gb|EDV17778.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I] gi|227005145|gb|ACP14888.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684] gi|229265529|gb|ACQ47166.1| conserved hypothetical protein [Bacillus anthracis str. A0248] Length = 176 Score = 46.2 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 36/170 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 5 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 54 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLD 160 L L+E D LD+ R +NR + E +D Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQFYVD 154 >gi|324119796|gb|EGC13676.1| hypothetical protein ERBG_00384 [Escherichia coli E1167] Length = 252 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 52/236 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 DY E +D + + + +D+ + V V Sbjct: 194 ---KPDHDYAELQDKI-------GVMSTIGYNGTKILEIDARAPYSEVLEQAQKAV 239 >gi|149927696|ref|ZP_01915948.1| Deoxynucleoside kinase [Limnobacter sp. MED105] gi|149823522|gb|EDM82752.1| Deoxynucleoside kinase [Limnobacter sp. MED105] Length = 204 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 57/161 (35%), Gaps = 23/161 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G GKT+ L+ + Q + + +P P E + Sbjct: 2 IEGPIGVGKTSLARLIAQRFQAE----LLLEKPEDNPFLEKFYQ---EPARYALPTQ--- 51 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISV 125 + F R+ + ++ + E +++ D FL D +A + L Q+I Sbjct: 52 LFFLFQRIGQLRDLTQRDFFEN-MVVSD-FLLEKDRMFA----SLTLDEEELKLYQQIYQ 105 Query: 126 ----QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 Q +PD I L ++RVQ R + E + + Sbjct: 106 HQSPQTSVPDLVIYLQASPQALIERVQKRATPYEVNITEAY 146 >gi|65320928|ref|ZP_00393887.1| COG1428: Deoxynucleoside kinases [Bacillus anthracis str. A2012] Length = 179 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 58/170 (34%), Gaps = 36/170 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 8 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 57 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLD 160 L L+E D LD+ R +NR + E +D Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQFYVD 157 >gi|166363926|ref|YP_001656199.1| guanylate kinase [Microcystis aeruginosa NIES-843] gi|166086299|dbj|BAG01007.1| guanylate kinase [Microcystis aeruginosa NIES-843] Length = 184 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 60/212 (28%), Gaps = 35/212 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G I G G GK T + L V TR P + L Sbjct: 1 MQPGQLIVITGPSGVGKGTLVRHLLTRFPNLYLSVSATTRPPRPGEIEGEDYYFLDRPSF 60 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E A E + +A ++ I L G+ ++ + Sbjct: 61 EEKMAAGEFLESAEYAGNYYGTPQSAIAAQLATGQTVIL------------------EIE 102 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+ +++ IL + +R++ R E+A ER Sbjct: 103 LEGARQVCQSFPEARRIFILPPSFEELERRLRGRGKDAETAIARRLERAQEE-------- 154 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 L + PD+ ++ I I+ Sbjct: 155 -LAASEEFPDQIV----NDDLETALDAIEKII 181 >gi|301603605|ref|XP_002931455.1| PREDICTED: UMP-CMP kinase isoform 1 [Xenopus (Silurana) tropicalis] Length = 219 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 65/223 (29%), Gaps = 56/223 (25%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ F G GAGK T + + A + R Sbjct: 27 FVVFVLGGPGAGKGTQCERIVQK-----------YGYTHLSAGDLLRDERKKPDS----- 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117 +I + +G+I+ L R ++ + A G + Sbjct: 71 -------------QYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGF 117 Query: 118 ----DSLQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 D+LQ D + D + ++R R + + + + Sbjct: 118 PRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNR---ESL--- 171 Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 EKR Q +L R + + VD++ S V T + +I Sbjct: 172 EKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDI 214 >gi|220918402|ref|YP_002493706.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1] gi|219956256|gb|ACL66640.1| ABC transporter related [Anaeromyxobacter dehalogenans 2CP-1] Length = 310 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 68/245 (27%), Gaps = 58/245 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF--GAEAE 67 G +GAGKTT I L L + R G P + A R L L E Sbjct: 47 GPDGAGKTTAIRALAGLLALDGGEA---RVLGADPLSGANRERLGLMPQQYSLYRDLTVE 103 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLC--DRFLD------SSYAY-------------- 105 + ARL + + E + + DRF D S Y Sbjct: 104 ENLHFFARLYVLPRAVYRERKERLLAITRLDRFTDRRADALSGGMYKKLALACALLHEPE 163 Query: 106 --------QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP--------VDIGL-KRVQ 148 G S+ L E T+++ P + L R + Sbjct: 164 VLLLDEPTNGVDPVSRRELWALLHEFVHGG----MTVLVSTPYMDEAERCSRVALVHRGR 219 Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP---------DRCHIVDSAHSFQS 199 A + FE + +H R+ P R +V + + Sbjct: 220 ALLDGEPGALIARFEDEAYEVHGGDRERLDAALAAHPAVLAASPAGARLKVVVARGARDE 279 Query: 200 VATNI 204 VA I Sbjct: 280 VARAI 284 >gi|90416968|ref|ZP_01224897.1| Deoxynucleoside kinase [marine gamma proteobacterium HTCC2207] gi|90331315|gb|EAS46559.1| Deoxynucleoside kinase [marine gamma proteobacterium HTCC2207] Length = 228 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 36/172 (20%), Positives = 59/172 (34%), Gaps = 24/172 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG G GKTT L NY++ + + + Sbjct: 21 YIAIEGPIGIGKTTLAKRLAHSF---NYEILL----EDAQENPFLERFYQDRRSNALPTQ 73 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKI---L-LCDRFL---DSSYAYQGERDSSQHLFLD 118 + F R+ ++ L +G I + + D FL D +A D L+ Sbjct: 74 ---LFFLFQRMRKLQE-----LRQGDIFQQVRIAD-FLIEKDPLFAKITLDDDEYRLYQT 124 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMI 169 I PD + L P + L RVQ R + E + L Y ++ + Sbjct: 125 VYDNIISDLPKPDLVVYLQAPTETLLDRVQLRGAPSERSIELSYLQQLNDAY 176 >gi|15238822|ref|NP_199595.1| AMK2 (Adenosine monophosphate kinase); ATP binding / adenylate kinase/ nucleobase, nucleoside, nucleotide kinase/ nucleotide kinase/ phosphotransferase, phosphate group as acceptor [Arabidopsis thaliana] gi|29427999|sp|Q9FIJ7|KADC2_ARATH RecName: Full=Probable adenylate kinase 2, chloroplastic; Short=AK 2; AltName: Full=ATP-AMP transphosphorylase 2; Flags: Precursor gi|10177920|dbj|BAB11331.1| unnamed protein product [Arabidopsis thaliana] gi|15146328|gb|AAK83647.1| AT5g47840/MCA23_18 [Arabidopsis thaliana] gi|24111333|gb|AAN46790.1| At5g47840/MCA23_18 [Arabidopsis thaliana] gi|332008196|gb|AED95579.1| adenosine monophosphate kinase [Arabidopsis thaliana] Length = 283 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 47/232 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +GK T L+ + +E R + + Sbjct: 67 IMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQLVPDE 126 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ RL ++ + L++G + S A Q Sbjct: 127 IVVMMVKDRLSQTDSEQKGWLLDG-------YPRS--ASQATALKG-------------F 164 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----ERKDVMIHEKRRQIFLDIA 181 PD I+L++P +I ++RV R + + + E +++ + + Q F D Sbjct: 165 GFQPDLFIVLEVPEEILIERVVGRRLDPVTGKIYHLKYSPPETEEIAV--RLTQRFDDTE 222 Query: 182 RNQPDRCHI------------------VDSAHSFQSVATNILNIVWELVQKR 215 R ++ S + V I + + EL+Q+R Sbjct: 223 EKAKLRLKTHNQNVSDVLSMYDDITIKIEGNRSKEEVFAQIDSSLSELLQER 274 >gi|217076456|ref|YP_002334172.1| gmk guanylate kinase [Thermosipho africanus TCF52B] gi|217036309|gb|ACJ74831.1| gmk guanylate kinase [Thermosipho africanus TCF52B] Length = 210 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 32/222 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G G G GKT+ IS L L+ + V TR P + E Sbjct: 2 KGTLFVVSGPSGVGKTSIISALMNKLENIVFSVSCTTRPPRPGEVDGVDYFFVSRDKFIE 61 Query: 62 FGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E + +A + + + + +G ++ D +D A Q +R+ Sbjct: 62 MREKGEFLEWAEVHGNLYGTPKKFVLENIEKGNRIILD--IDVQGALQVKRNFD------ 113 Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D I P ++ +R+ R + + L E + + Sbjct: 114 ------------DAVFIFVAPPSYEVLKERLLKRGTENSQSMLKRLENAKWEMSKIVEFD 161 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVAT--NILNIVWELVQKRV 216 +L + + + S +A I+ E + KR+ Sbjct: 162 YLIVNSDLEKSIL---AMKSI-VIAESYRTRRILDEELIKRL 199 >gi|213511889|ref|NP_001134661.1| deoxycytidine kinase [Salmo salar] gi|209735048|gb|ACI68393.1| Deoxycytidine kinase [Salmo salar] Length = 263 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 30/192 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---- 53 M+ IS EG AGK+T + LL+ Q K+++V + R + Sbjct: 18 MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVPEPIARWCNVQTQHSEFEELTVSQ 75 Query: 54 -----LLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCDRF 98 +L ++ A A R + E + + DR+ Sbjct: 76 KNGGNVLQMMYEKPERWAYTFQTYAFMSRVRAQMKSTNGKLREAENPVQFFERSVYSDRY 135 Query: 99 LDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 + ++ Y+ E + + L E + + D I L + ++R+ R Sbjct: 136 IFAANLYESECPNETEWSIYQDWHGWLHEQFGKHIELDGIIYLRAAPERCMERLHRRGRE 195 Query: 154 RESA-CLDYFER 164 E L+Y E+ Sbjct: 196 EEQGIPLEYLEK 207 >gi|194207483|ref|XP_001494911.2| PREDICTED: similar to UMP-CMP kinase [Equus caballus] Length = 174 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 26/150 (17%) Query: 78 HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125 +I + +GKI+ L R +D + A Q + D+LQ + Sbjct: 26 QYGELIEKYIKDGKIVPVEITISLLKREMDQTMAANAQKNKFLIDGFPRNEDNLQGWNKT 85 Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182 + D + D +I ++R R + + + + EKR Q +L + Sbjct: 86 MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKP 139 Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207 + + +D++ S V ++ I Sbjct: 140 IIDLYEEMGKVKKIDASKSVDEVFDEVVKI 169 >gi|301610883|ref|XP_002934979.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1 [Xenopus (Silurana) tropicalis] Length = 4084 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P RH LL + Sbjct: 1941 VVIVGPSGAGKSTLWRMLRAALNKIGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 1995 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R + ++CD +++SL + Sbjct: 1996 SDGVLTNSAR-----QVVRESQDINSWIICD-------------GDIDPEWIESLNSV 2035 >gi|156548617|ref|XP_001608151.1| PREDICTED: similar to adenylate kinase isoenzyme [Nasonia vitripennis] Length = 192 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 67/216 (31%), Gaps = 47/216 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-------GGTPAAEAARHVLLSCGVDEFG 63 G G GK T + ++ + VH++ G+P + ++ Sbjct: 8 GGPGCGKGTQCDRI---IKNYGF-VHLSSGDLLRDEVASGSPRGAELQELMSKGLFVPTD 63 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ I A E K +L D + L+ Sbjct: 64 VVLSL----------IKERIEKAKAENPDTKGVLIDGY---------------PRELEQG 98 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179 + D I D+ + + R+ R + D E +KR +IF + Sbjct: 99 LQFEKDVCPVDLIIFFDVKNETLISRLLGRAAAAAVKRADDNE----ETIKKRIEIFNEK 154 Query: 180 ---IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I + D+C +++ + ++ + + +L+ Sbjct: 155 NGKIVEHYKDKCLRINAEGAVDAIFDQVSQALDKLL 190 >gi|94984209|ref|YP_603573.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300] gi|94554490|gb|ABF44404.1| deoxynucleoside kinase [Deinococcus geothermalis DSM 11300] Length = 207 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 55/164 (33%), Gaps = 22/164 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ G G+GK+T +L + P R V Sbjct: 1 MYLALSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYRDMRRYSFHSQVYFLSR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDS--- 119 E H+ N++ A + ++ DR F D++ + +S Q D Sbjct: 61 RLE---------QHL-NLVTGA----RYVIQDRTVFEDANIFARNLFESGQMEARDWATY 106 Query: 120 --LQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L + + + PD I +D V KR+ R E A D Sbjct: 107 LGLYQGILPALRVPDLLIHIDASVPTLKKRIAQRGRAYEKAIPD 150 >gi|157138694|ref|XP_001657341.1| thymidine kinase [Aedes aegypti] gi|108869443|gb|EAT33668.1| thymidine kinase [Aedes aegypti] Length = 248 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 68/204 (33%), Gaps = 20/204 (9%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64 EG G+GKTT ++ ++ V + EP ++L Sbjct: 22 IEGNIGSGKTTFLN----HFEKFKDRVCLLTEPVEKWRDCGGVNLLDLMYKEPHRWAMPF 77 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDSLQE 122 + + H + + + + R+ +++ A ++ + + Sbjct: 78 QTYVTLTMLNM--HTYQTDKSVKLMERSMFSARYCFVENMLASGSLHQGMYNILQEWYEF 135 Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--RRQIFLD 179 I + D + L +I +R++ R ES + ++ +HE F Sbjct: 136 IHANIHIQADLIVYLRTSPEIVYERMKKRARSEESCVPLKYLQELHELHENWLIHGTFPR 195 Query: 180 IARNQPDRCHIVDSAHSFQSVATN 203 +A P ++D+ ++++ Sbjct: 196 VA---P--VLVLDADLDLHNISSE 214 >gi|229005889|ref|ZP_04163583.1| hypothetical protein bmyco0002_28130 [Bacillus mycoides Rock1-4] gi|228755353|gb|EEM04704.1| hypothetical protein bmyco0002_28130 [Bacillus mycoides Rock1-4] Length = 182 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 47/186 (25%) Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74 +GKTT L R L++ + + P G E +++ L E F Sbjct: 3 SGKTT----LARRLEKHGFPILY-ENPYG--IVEKRKNLNLDIYTKEG--------FITN 47 Query: 75 RLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHLFLDSLQEI 123 + +E I+ G+I++ DR + + ++ L L+ Sbjct: 48 QRMFIEAKIKEIQNARGRIVIFDRGSEDIEFYTIYFPKLIGMDWDIENELKDELYKLRRC 107 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 D LD+ I +R +N + R S FE++ L++A Sbjct: 108 HS-----DAIFYLDVSKKILQERKKNDNTRRRST----FEKQ------------LELAEI 146 Query: 184 QPDRCH 189 + Sbjct: 147 EKQWYK 152 >gi|330815623|ref|YP_004359328.1| Deoxynucleoside kinase family protein [Burkholderia gladioli BSR3] gi|327368016|gb|AEA59372.1| Deoxynucleoside kinase family protein [Burkholderia gladioli BSR3] Length = 227 Score = 45.8 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 15/161 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG G GKT+ +L+ + + P P E A Sbjct: 18 RYIAIEGPIGVGKTSLAALIAERWAMR----PLLERPQDNPFLE---RFYREGARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQ 121 + + A + + A G ++ D ++ + +A D L+ + Sbjct: 71 Q----LSFALQRAQQAQELAAAQAAGLAIVAD-YMPQKNEIFARLTLGDDEWQLYRALAE 125 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + V PD + L ++ R+Q R E D + Sbjct: 126 RVDVPAPAPDLVVYLQASPEVLYARIQKRGIAMELQIGDAY 166 >gi|228916283|ref|ZP_04079853.1| hypothetical protein bthur0012_34990 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228947267|ref|ZP_04109561.1| hypothetical protein bthur0007_33970 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092627|ref|ZP_04223778.1| hypothetical protein bcere0021_33890 [Bacillus cereus Rock3-42] gi|228690780|gb|EEL44556.1| hypothetical protein bcere0021_33890 [Bacillus cereus Rock3-42] gi|228812514|gb|EEM58841.1| hypothetical protein bthur0007_33970 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228843481|gb|EEM88559.1| hypothetical protein bthur0012_34990 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 195 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 8 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 57 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154 >gi|261337840|ref|ZP_05965724.1| deoxynucleoside kinase family protein [Bifidobacterium gallicum DSM 20093] gi|270277306|gb|EFA23160.1| deoxynucleoside kinase family protein [Bifidobacterium gallicum DSM 20093] Length = 210 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 68/221 (30%), Gaps = 43/221 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK++ ++ DV P + + A + Sbjct: 9 GAGKSSLAGIVGSHY---GTDVFYES-VDDNPVLDLYYK----------DPKKYAFLLQI 54 Query: 74 ARLDHVENVIRPALMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLDSLQEIS-- 124 L+ I+ A +L DR FLD + + QH++ + L + Sbjct: 55 HFLNKRFESIKKAYKHNNNVL-DRSIFEDALFLDLNVINGNVTRTEQHIYHELLNNMMEE 113 Query: 125 ---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH--EKRRQIFLD 179 + + PD I +D+ + L+R++ R E E + H ++ + Sbjct: 114 LEGMPKKAPDLLIYIDVSFEKMLERIKKRGRTFEQ-----IENDPSLYHYYQQVHDAYPR 168 Query: 180 IARNQP---------DRCHIVDSAHSFQSVATNILNIVWEL 211 D V+ + V I + + +L Sbjct: 169 WFDEYHMSPKIRIDGDTYDFVNDDAAADHVLAQIDDALRDL 209 >gi|259089145|ref|NP_001158610.1| deoxycytidine kinase [Oncorhynchus mykiss] gi|225705244|gb|ACO08468.1| Deoxycytidine kinase [Oncorhynchus mykiss] Length = 263 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 67/194 (34%), Gaps = 34/194 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------A 46 M+ IS EG AGK+T + LL+ Q K+++V EP Sbjct: 18 MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVP--EPIARWCNVQTQHSEFEELTM 73 Query: 47 AEAARHVLLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCD 96 ++ + +L ++ A A R + E + + D Sbjct: 74 SQKSGSNVLQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREAENPVQFFERSVYSD 133 Query: 97 RFLDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 R++ ++ Y+ E + + L + + + D I L + ++R+ R Sbjct: 134 RYIFAANLYESECLNETEWSIYQDWHGWLHKQFGKHIELDGIIYLRAAPERCMERLHRRG 193 Query: 152 SLRESA-CLDYFER 164 E L+Y E+ Sbjct: 194 REEEQGIPLEYLEK 207 >gi|229493096|ref|ZP_04386891.1| uridine kinase [Rhodococcus erythropolis SK121] gi|229320126|gb|EEN85952.1| uridine kinase [Rhodococcus erythropolis SK121] Length = 207 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 35/153 (22%), Positives = 54/153 (35%), Gaps = 25/153 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ +G++G+GKTT L L + V + P R LS + Sbjct: 23 VAIDGVDGSGKTTFTKSLAAQLNERRVIVIHV-DDFLNPPEIRHRRGRLSPEGFWLDSY- 80 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDS----SQHLFLDS 119 D +E + L G DR S AY D + LFL Sbjct: 81 --------DYDALERHVLAPLKPGG----DREYRPRRDSDAYLHAADGAVVLVEGLFLHR 128 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 E + + D +I LD+P +I +R+ R Sbjct: 129 -DEFASRW---DYSIFLDVPFEITAERMNLRDG 157 >gi|30686829|ref|NP_194258.2| adenylate kinase family protein [Arabidopsis thaliana] gi|38603926|gb|AAR24708.1| At4g25280 [Arabidopsis thaliana] gi|44681436|gb|AAS47658.1| At4g25280 [Arabidopsis thaliana] Length = 249 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 50/215 (23%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPG-GTPAAEAARHVLLSCGVDE 61 FI+F G G+GK T + ++ + RE T +++ + Sbjct: 44 FITFVLGGPGSGKGTQCEKIVETFGLQHLSAGDLLRREIAMHTENGAMILNLIKDGKIVP 103 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +I+ L D + Sbjct: 104 --------------SEVTVKLIQKELES-----SD----------NRKFLIDGFPRTEEN 134 Query: 122 EISVQEVM---PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ + ++ PD + D P + +KRV NR R ++ +KR +IF Sbjct: 135 RVAFERIIRADPDVVLFFDCPEEEMVKRVLNRNQGRIDD--------NITTMKKRLKIFN 186 Query: 179 DIAR------NQPDRCHIVDSAHSFQSVATNILNI 207 + R + + +++ + + ++L I Sbjct: 187 ALNRPVIDYYKNKGKLYTINAVGTVDDIFQHVLPI 221 >gi|33862095|ref|NP_893656.1| adenylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|46396096|sp|Q7UZW3|KAD_PROMP RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|33634313|emb|CAE19998.1| Adenylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 184 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 43/214 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 M L F G GAGK T +LL +L ++ T + + ++ Sbjct: 1 MKKHLL--FLGPPGAGKGTQAALLSAANSYLHLSTGELLRKEIDLDTDLGKQVKDIM--N 56 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHL 115 + V +++ L + +L D + Sbjct: 57 RGELVSD------------QLVLEIVKKNLDKDNNGWIL-DGY------------PRNLS 91 Query: 116 FLDSLQEISVQEVMP-DCTIILDLPVDIGLKR--VQNRYSLRESACLDYFERKDVMIHEK 172 ++SL ++ + P + LD+P ++ +KR ++ R E + E Sbjct: 92 QVNSLNDVLININQPLEIVFYLDIPDEVLIKRLLIRGRKDDNEKTIKTRL-KIYKETTEP 150 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + + D+A + + + ++++ +I Sbjct: 151 LIEYYKDLALLEN-----IKADGDLKTISADIKQ 179 >gi|188996218|ref|YP_001930469.1| Nucleoside-triphosphate--adenylate kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|188931285|gb|ACD65915.1| Nucleoside-triphosphate--adenylate kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 211 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 53/233 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I F G GAGK T LLK R + T + R + + E G Sbjct: 3 KIIIFLGPPGAGKGTQSQLLKE---RNGFIQIST--------GDLLREAVKNQ--TELGK 49 Query: 65 EAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDS-L 120 A+ + + D + ++I+ L E + D + + G + LD+ L Sbjct: 50 LAKQYMDEGKLVPDDLIISLIKEKLQE--------YADKNIIFDGFPRTIPQAESLDNLL 101 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL------------------DYF 162 ++ D I+ + D +KR+ R + Sbjct: 102 SHLNKNV---DAVILFKIEDDEVVKRLAGRRVCPSCGAVYHMIYNPPKTDEICDKCGARL 158 Query: 163 ERKDVMIHEKRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++D E R +++ + ++ +D+ + +++ I +++ Sbjct: 159 IQRDDDKEEVIRKRLEVYHQQTKPLIEYYKNKIVEIDATDNPKNIYNKIASMI 211 >gi|317505365|ref|ZP_07963293.1| conserved hypothetical protein [Prevotella salivae DSM 15606] gi|315663579|gb|EFV03318.1| conserved hypothetical protein [Prevotella salivae DSM 15606] Length = 361 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 6/102 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G AGKTT + + Y V E + ++ + + G +A Sbjct: 7 IVLTGGPCAGKTTALVKIIEHFSSLGYKVFTIPEVPTMFSQSGMDYLTTNKNLFYEGEKA 66 Query: 67 --EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 E + + H+ E +++CDR AY Sbjct: 67 TLEIQLSLEDKFLHMAE----QCEEPALIVCDRGAMDISAYM 104 >gi|292654298|ref|YP_003534195.1| signal recognition particle receptor SRalpha [Haloferax volcanii DS2] gi|33518607|gb|AAO73354.1| signal recognition particle receptor-like protein [Haloferax volcanii] gi|291372798|gb|ADE05025.1| signal recognition particle receptor SRalpha [Haloferax volcanii DS2] Length = 456 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 19/145 (13%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67 F GI G GKTT I+ L ++ +++ Y + A E R + + Sbjct: 263 FTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIRE-----HAEALDKKLI 317 Query: 68 AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 A + + + A I+L D R + + + L++I + Sbjct: 318 AHEQGGDPAAVIYDGVEYAEAHDIDIVLGD---------TAGRLHTSNDLMAQLEKID-R 367 Query: 127 EVMPDCTIILD--LPVDIGLKRVQN 149 V PD T+ +D + ++R + Sbjct: 368 VVGPDLTLFVDEAVAGQDAVERARQ 392 >gi|18411518|ref|NP_567093.1| uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative [Arabidopsis thaliana] gi|30695141|ref|NP_850726.1| uridylate kinase, putative / uridine monophosphate kinase, putative / UMP kinase, putative [Arabidopsis thaliana] gi|18252847|gb|AAL62350.1| uridylate kinase-like protein [Arabidopsis thaliana] gi|21389695|gb|AAM48046.1| uridylate kinase-like protein [Arabidopsis thaliana] Length = 204 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 67/213 (31%), Gaps = 61/213 (28%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S Sbjct: 28 GGPGSGKGTQCANVVKHFS-----------YTHFSAGDLLRAEIKSGSE----------- 65 Query: 71 FAAARLDHVENVIRPALMEGKIL--------LC--------DRFLDSSYAYQGERDSSQH 114 F A I+ + EG+I+ LC D+FL + R+ Sbjct: 66 FGAM--------IQSMIAEGRIVPSEITVKLLCKAMEESGNDKFLIDGF----PRNEENR 113 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +++ I P + D P + +R+ +R RE ++ +++ + E Sbjct: 114 NVFENVARI-----EPAFVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVEST- 167 Query: 175 QIFLDIAR--NQPDRCHIVDSAHSFQSVATNIL 205 L I + +++A S + V + Sbjct: 168 ---LPIISYYESKGKLRKINAAKSSEEVFEAVR 197 >gi|289644162|ref|ZP_06476254.1| adenylate kinase [Frankia symbiont of Datisca glomerata] gi|289506012|gb|EFD27019.1| adenylate kinase [Frankia symbiont of Datisca glomerata] Length = 214 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 68/237 (28%), Gaps = 68/237 (28%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDE 61 F+ G++G+GK T +L L + V + R T + ++ S + Sbjct: 3 KFVVM-GVQGSGKGTQAKMLADDLDLVHISVGDIFRWNVQSHTKLGAQVKRIVASGHLVG 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 D VE+V+R L + + G +++ L+ Sbjct: 62 D--------------DLVESVVRDRLASHDW-------NYGFVIDGFPRNARQAEF-FLE 99 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS----------------------------- 152 + I LDLP + +RV R Sbjct: 100 SYDIDG-----VIYLDLPDEEVYRRVLARRLCSRCGLDYNLIASRPRVADTCDVCGGQLL 154 Query: 153 LRESACLDYFERKDVMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 R + E + H + R +IF + ++D+ V + I Sbjct: 155 TRSDDNPEALEVRLREYHARTRPVMEIFQR-----KEYVAVIDARRPAVDVQSEIRE 206 >gi|157138696|ref|XP_001657342.1| thymidine kinase [Aedes aegypti] gi|108869444|gb|EAT33669.1| thymidine kinase [Aedes aegypti] Length = 261 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 68/204 (33%), Gaps = 20/204 (9%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVDEFGA 64 EG G+GKTT ++ ++ V + EP ++L Sbjct: 35 IEGNIGSGKTTFLN----HFEKFKDRVCLLTEPVEKWRDCGGVNLLDLMYKEPHRWAMPF 90 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDSLQE 122 + + H + + + + R+ +++ A ++ + + Sbjct: 91 QTYVTLTMLNM--HTYQTDKSVKLMERSMFSARYCFVENMLASGSLHQGMYNILQEWYEF 148 Query: 123 ISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--RRQIFLD 179 I + D + L +I +R++ R ES + ++ +HE F Sbjct: 149 IHANIHIQADLIVYLRTSPEIVYERMKKRARSEESCVPLKYLQELHELHENWLIHGTFPR 208 Query: 180 IARNQPDRCHIVDSAHSFQSVATN 203 +A P ++D+ ++++ Sbjct: 209 VA---P--VLVLDADLDLHNISSE 227 >gi|293449333|ref|ZP_06663754.1| ATP-binding protein yghR [Escherichia coli B088] gi|291322423|gb|EFE61852.1| ATP-binding protein yghR [Escherichia coli B088] Length = 252 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 39/236 (16%), Positives = 77/236 (32%), Gaps = 52/236 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 DY E +D + + + +DS+ + V V Sbjct: 194 ---KPDHDYAELQDKI-------GVMSTIGYNGTKILEIDSSAPYSEVLEQAQKAV 239 >gi|326804113|ref|YP_004321931.1| deoxyguanosine kinase [Aerococcus urinae ACS-120-V-Col10a] gi|326651346|gb|AEA01529.1| deoxyguanosine kinase [Aerococcus urinae ACS-120-V-Col10a] Length = 209 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 53/168 (31%), Gaps = 31/168 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G GAGK+T+ L +L V EP F + Sbjct: 2 IVFAGTIGAGKSTYAGKLAEYL---GTKVFY--EP--VEENPILDKYYQDPKKYAFSLQI 54 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY------------QGERDSS 112 + +N I+ A + +L DR + D + Y Sbjct: 55 YFL------NQRFKN-IKAAFFDNNNVL-DRSIYEDELFTYLNVLNGNISEEEFAIYRDL 106 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ L + + PD + LD +D +K ++ R + E D Sbjct: 107 LANMMEELDSLPKKA--PDLLVFLDSSLDNAVKNIKKRGRVYEQPSSD 152 >gi|301598428|pdb|3ADB|A Chain A, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed With Selenocysteine Trna And Amppnp (Crystal Type 1) gi|301598429|pdb|3ADB|B Chain B, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed With Selenocysteine Trna And Amppnp (Crystal Type 1) gi|301598432|pdb|3ADC|A Chain A, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed With Selenocysteine Trna And Amppnp (Crystal Type 2) gi|301598433|pdb|3ADC|B Chain B, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed With Selenocysteine Trna And Amppnp (Crystal Type 2) gi|301598436|pdb|3ADD|A Chain A, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed With Selenocysteine Trna And Amppnp (Crystal Type 3) gi|301598437|pdb|3ADD|B Chain B, Crystal Structure Of O-Phosphoseryl-Trna Kinase Complexed With Selenocysteine Trna And Amppnp (Crystal Type 3) Length = 259 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 51/210 (24%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDEF 62 I G+ G GK+T L + L + N DV V ++ R V + Sbjct: 13 LIILTGLPGVGKSTFSKNLAKILSKNNIDVIVL-------GSDLIRESFPVWKEKYEEFI 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ +A ++ ++ D D++Y Y R ++ + Sbjct: 66 KKSTYRLIDSA--------------LKNYWVIVD---DTNY-YNSXRRDLINIAKKYNKN 107 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 ++ I L +D+ ++R R E+ + +K + F + + Sbjct: 108 YAI--------IYLKASLDVLIRRNIERG-----------EKIPNEVIKKXYEKFDEPGK 148 Query: 183 NQP--DRCHIVDSAHSFQSVATNILNIVWE 210 + I+D+ I + E Sbjct: 149 KYKWDEPFLIIDTTKDID--FNEIAKKLIE 176 >gi|194694232|gb|ACF81200.1| unknown [Zea mays] Length = 212 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 63/216 (29%), Gaps = 63/216 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 32 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71 Query: 71 FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114 +I + EGKI+ D+FL + + Sbjct: 72 ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKSENDKFLIDGF----PGNEENR 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 +++ +IS P + D + KR+ R R ++ +++ + Sbjct: 118 AAFENVTKIS-----PAFVLFFDCSEEDMEKRLLGRNQGRVDDNIETIKKRFKTFVDSTL 172 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + N D+ +D+A V ++ I Sbjct: 173 PVIEHY-----NSKDKVKKIDAAKPIPEVFEDVKAI 203 >gi|317968056|ref|ZP_07969446.1| shikimate kinase [Synechococcus sp. CB0205] Length = 207 Score = 45.8 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 65/209 (31%), Gaps = 48/209 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ L L + D + E A + + S G F A A++ Sbjct: 24 GSGKSSVGRHLAEALDYRFLDADTSLE---QVAGRSIPEIFASEGETGFRALESAVLNQI 80 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 A S G +Q L + Sbjct: 81 A-----------------------SWHSLVVATGGGVVTQPANWGELHQGV--------V 109 Query: 134 IILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKR---RQIFLDIARNQPDRCH 189 I LD P I L R++ + R D ER ++ E+R Q L I ++ Sbjct: 110 IWLDAPDAILLARLEADPTPRPLMEAEDRAERLASLMAERRPLYAQADLQILQD------ 163 Query: 190 IVDSAHSFQSVATNILNIVWELVQKRVSP 218 + V IL + ++++R +P Sbjct: 164 ----GRPAEQVVQQILEALPSIIKERKAP 188 >gi|323705511|ref|ZP_08117086.1| guanylate kinase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535413|gb|EGB25189.1| guanylate kinase [Thermoanaerobacterium xylanolyticum LX-11] Length = 205 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 71/219 (32%), Gaps = 49/219 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N GL I G GAGK T L + + + TR+P E V+ Sbjct: 5 NKGLLIVISGPSGAGKGTVCKALLKKDENLKLSISMTTRKP---RNGEVDGENYFFTTVE 61 Query: 61 EFGAEAEA--IVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 +F E+ ++ A D+ + ++ + EG ++ Sbjct: 62 KFKTLIESNMLLEWAKVYDNYYGTPKEFVQKNIDEGHDVI-------------------- 101 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER--KDVMIH 170 L +D + V++ P+ + LP + R++ R + E L F+ +++ Sbjct: 102 LEIDIQGALKVKDKYPEGVFVFILPPSMEELKNRIKKRGTETEEEILKRFKSAYEEINFV 161 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +++ IL I+ Sbjct: 162 SRY-------------NYVVIN--DDVDLAVDKILAIIK 185 >gi|242072152|ref|XP_002446012.1| hypothetical protein SORBIDRAFT_06g000495 [Sorghum bicolor] gi|241937195|gb|EES10340.1| hypothetical protein SORBIDRAFT_06g000495 [Sorghum bicolor] Length = 250 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 44/216 (20%) Query: 6 FISF-EGIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 FI+F G G+GK T + + L + H G+ E ++ + Sbjct: 67 FIAFVLGGPGSGKGTQCTKIASDFGFAHLSAGDLLRHEIA--SGSEKGELILDIIKEGRI 124 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +IR A+ K +L D F Sbjct: 125 VP--------------SEITVELIRKAMETKNAKRVLIDGFPRC------------EENR 158 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + ++I PD I D P D +KR+ R R ++ +K + + E Sbjct: 159 IAFEKIV--GTEPDIVIFFDCPEDEMVKRLLGRNQGRVDDNIETI-KKRLKVFESLN--- 212 Query: 178 LDIARNQPDR--CHIVDSAHSFQSVATNILNIVWEL 211 L + R H +++ + + + + L Sbjct: 213 LPVVDYYSSRGKVHKINATGTADEIFEAVRRLFSSL 248 >gi|325968577|ref|YP_004244769.1| hypothetical protein VMUT_1060 [Vulcanisaeta moutnovskia 768-28] gi|323707780|gb|ADY01267.1| hypothetical protein VMUT_1060 [Vulcanisaeta moutnovskia 768-28] Length = 237 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 62/210 (29%), Gaps = 38/210 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--------------------- 43 I G EGAGK+++ L+K +L + +PGG Sbjct: 3 KLIYLVGPEGAGKSSNARLIKYYLTKYYGRCVAVPKPGGEIRSRNLFVDVLARFLMRVGR 62 Query: 44 -----TPAAEAARHV--LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 P + R V +L + E + F A + VI L G ++ Sbjct: 63 VEYDYRPEGKLMRKVDSVLMSRIHGLWIFIELLGFLTA---YFVKVIAVQLF-GCDVVLT 118 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP----DCTIILDLPVDIGLKR--VQNR 150 RF+ + ++ + P D I LD + KR + R Sbjct: 119 RFIIDFLTDMFLLSRRAGKSFRLVSTLTYVFLRPMFGVDLIIYLDADYSVLRKRYYIAKR 178 Query: 151 YSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + + + D+ Sbjct: 179 DMIEPPWRIARIRVISRALFNMISKYYDDL 208 >gi|37780424|gb|AAO64438.1| deoxycytidine kinase 2 [Danio rerio] gi|63101770|gb|AAH95077.1| Zgc:110540 protein [Danio rerio] gi|157423304|gb|AAI53550.1| Zgc:110540 [Danio rerio] gi|213627444|gb|AAI71341.1| Zgc:110540 [Danio rerio] gi|213627446|gb|AAI71343.1| Zgc:110540 [Danio rerio] Length = 264 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 67/192 (34%), Gaps = 32/192 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR---------KNYDVHVTR-EPGGTPAAEAAR 51 + +S EG AGK+T + LL+R + K +V T E ++ + Sbjct: 20 KRAMKVSIEGNIAAGKSTFVRLLERASEEWEVIPEPIGKWCNVQTTENEYEELSTSQKSG 79 Query: 52 HVLLSCGVDEFGAEAEAIVFAA-------------ARLDHVENVIRPALMEGKILLCDRF 98 LL D+ + A A+L E ++ + DR+ Sbjct: 80 GNLLQMLYDKPSRWSYTFQTYACLSRVRSQLQPPSAKLQQAEKPVQFFERS---VYSDRY 136 Query: 99 LDSSYAYQGERDSSQHLFL--DSLQEISVQE---VMPDCTIILDLPVDIGLKRVQNRYSL 153 + +S ++ + + D + Q + D I L + ++R+Q R Sbjct: 137 VFASNLFESGDLNETEWAIYQDWHSWLLTQFESQIELDAMIYLRADPERCMQRLQFRGRE 196 Query: 154 RESA-CLDYFER 164 E LDY E+ Sbjct: 197 EEQGIPLDYLEK 208 >gi|225705382|gb|ACO08537.1| Deoxycytidine kinase [Oncorhynchus mykiss] Length = 263 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 67/194 (34%), Gaps = 34/194 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------A 46 M+ IS EG AGK+T + LL+ Q K+++V EP Sbjct: 18 MDKTKRISIEGNIAAGKSTFVRLLEE--QSKDWEVVP--EPIARWCNVQTQRSEFEELTM 73 Query: 47 AEAARHVLLSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI------LLCD 96 ++ + +L ++ A A R + E + + D Sbjct: 74 SQKSGSNVLQMMYEKPERWAYTFQTYACMSRVRAQMKSTNGKLREAENPVQFFERSVYSD 133 Query: 97 RFLDSSYAYQGERDSSQHLFLD-----SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 R++ ++ Y+ E + + L + + + D I L + ++R+ R Sbjct: 134 RYIFAANLYESECLNETEWSIYQDWHGWLHKQFGKHIELDGIIYLRAAPERCMERLHRRG 193 Query: 152 SLRESA-CLDYFER 164 E L+Y E+ Sbjct: 194 REEEQGIPLEYLEK 207 >gi|196036728|ref|ZP_03104120.1| hypothetical protein BCW_2472 [Bacillus cereus W] gi|228915140|ref|ZP_04078737.1| uridine kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228946193|ref|ZP_04108526.1| uridine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229122094|ref|ZP_04251310.1| uridine kinase [Bacillus cereus 95/8201] gi|195990692|gb|EDX54668.1| hypothetical protein BCW_2472 [Bacillus cereus W] gi|228661437|gb|EEL17061.1| uridine kinase [Bacillus cereus 95/8201] gi|228813484|gb|EEM59772.1| uridine kinase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228844569|gb|EEM89623.1| uridine kinase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 198 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 70/220 (31%), Gaps = 55/220 (25%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56 MN I+ + G GKTT L L ++ R T + Sbjct: 13 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 65 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + + + H+ I+ + ++ I+ D +AY Sbjct: 66 --DDGANYDEWVLTPLIKDIQHL---IQDSNVDYIIV------DYPFAY----------- 103 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 104 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHY 149 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208 R+ +L+ +P+ ++D A S + I + Sbjct: 150 INYARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEEL 189 >gi|94268733|ref|ZP_01291271.1| Guanylate kinase [delta proteobacterium MLMS-1] gi|93451489|gb|EAT02320.1| Guanylate kinase [delta proteobacterium MLMS-1] Length = 210 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 69/233 (29%), Gaps = 47/233 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G GAGKTT + + R + + H TR P H + Sbjct: 1 MSRGCLFVVSAPSGAGKTTLLKKILATTPRAGFSISHTTRPPRAGEQDGVDYHFVDRDAF 60 Query: 60 DEFGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 D + + + +R I AL G+ + D +D A Q Sbjct: 61 DRMRRRGDFLEAAEVHGNFYGTSRAA-----IEAALARGEDIFLD--VDVQGARQ----- 108 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMI 169 + L EI+ + P + +R++ R + E+ E + Sbjct: 109 -----IRDLAEIAA-------VFLFIAPPSAAILEQRLRGRDTDDEATIALRLENARREM 156 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 E D I D + + I IV E ++R P Sbjct: 157 EE----------AAWYDYLVINDQLRQAEELLAAI--IVAERCRRRRWPDGEP 197 >gi|326517860|dbj|BAK07182.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 240 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 25/210 (11%), Positives = 65/210 (30%), Gaps = 43/210 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T + + + + RE T ++++ + Sbjct: 28 GGPGSGKGTQCAKIVSQF---GFTHLSAGDLLREEVKSDTEQGTMIKNLMHEGKLVPSEI 84 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ + L G D+FL + E + ++ Sbjct: 85 IVRLLL-------------KAMLASGN----DKFLIDGFPRDEENREAYEKIIN------ 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181 + P+ +++D + +R+ +R R+ ++ ++ + + Q + + Sbjct: 122 ---IEPEFVLLIDCSREEMERRILHRNQGRDDDNMETIRQRFEVFQQSTLPVIQHYEKM- 177 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + VD V ++ I +L Sbjct: 178 ----GKLRRVDGTRQPDMVFEDVKVIFAQL 203 >gi|16903158|gb|AAL30433.1|AF439264_1 FtsY NG domain [Haloferax volcanii] Length = 266 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 19/145 (13%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67 F GI G GKTT I+ L ++ +++ Y + A E R + + Sbjct: 73 FTGINGVGKTTTIAKLAKYFEKQGYSTVLANGDTYRAGANEQIRE-----HAEALDKKLI 127 Query: 68 AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 A + + + A I+L D R + + + L++I + Sbjct: 128 AHEQGGDPAAVIYDGVEYAEAHDIDIVLGD---------TAGRLHTSNDLMAQLEKID-R 177 Query: 127 EVMPDCTIILD--LPVDIGLKRVQN 149 V PD T+ +D + ++R + Sbjct: 178 VVGPDLTLFVDEAVAGQDAVERARQ 202 >gi|325678984|ref|ZP_08158582.1| uridine kinase family protein [Ruminococcus albus 8] gi|324109488|gb|EGC03706.1| uridine kinase family protein [Ruminococcus albus 8] Length = 204 Score = 45.4 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 21/178 (11%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--LSCGVDEFGAEA 66 +G+ GAGK+T ++ L+ V + ++ + + E Sbjct: 25 IDGLGGAGKSTIAEEVRTELEAAGVHVVLLH----------IDDLITPRAVRYNNNFPEW 74 Query: 67 EAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYA--YQGERDSSQHLFLDSLQ 121 E R D+ + L +G +I L D+ DS Y + LQ Sbjct: 75 ECYYVLQWRYDYFTEKLE-ILKKGGKTEIELYDKDNDSYITEEYSTAGRTVILTEGIFLQ 133 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + D T+ +DLP +I L+RV ++RY + +E + + + + Sbjct: 134 RKELDGSF-DLTVYIDLPENIRLERVLCRDRYIGNDEEIRAKYEGRYFPAERRYVEEY 190 >gi|58038834|ref|YP_190798.1| adenylate kinase [Gluconobacter oxydans 621H] gi|58001248|gb|AAW60142.1| Adenylate kinase [Gluconobacter oxydans 621H] Length = 193 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 71/220 (32%), Gaps = 47/220 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G GAGK T L+ L++ + + E A ++ G Sbjct: 3 IILLGPPGAGKGTQAKRLEALYGLKQISTGDMLRAEVAAGSAIGNEAKAIMEKGQFVPDP 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++ + +P G + D F R SQ LD++ +S Sbjct: 63 IIVAMI--------QNRIAQPDCERGF--ILDGF---------PRTESQAEALDTM--LS 101 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-------- 176 + + D I+LD+ + ++R+ +R + D + DV R Sbjct: 102 ARGLTIDAVILLDVNEEKLVERIASRCGEDGTRRPD--DNPDV-----VRARLDVYRKQT 154 Query: 177 -----FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + A R VD +SV I IV Sbjct: 155 APILPYYERA----GRLLHVDGMKDVESVGKEIDAIVAAA 190 >gi|313124770|ref|YP_004035029.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312281333|gb|ADQ62052.1| Deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 215 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 52/171 (30%), Gaps = 37/171 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L + L E + +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAKHL------------GSTAYYEEVNNNPVLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111 + E I A +L DR +D+ A YQ Sbjct: 53 FLLNTYFLNKRLAE--INAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY--- 106 Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H +D++ E PD I + + +D LKR+ R E D Sbjct: 107 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRGRKFEQLDSD 155 >gi|115350718|ref|YP_772557.1| adenylyl-sulfate kinase [Burkholderia ambifaria AMMD] gi|123322713|sp|Q0BI00|CYSC_BURCM RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|115280706|gb|ABI86223.1| adenylylsulfate kinase [Burkholderia ambifaria AMMD] Length = 181 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 22/100 (22%) Query: 1 MNSGL-FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M F+ G+ GAGK+T +LLK+ L + R LL Sbjct: 1 MKQKKVFVVWLTGVSGAGKSTLANLLKQQLDARG-----------------LRTYLLDGD 43 Query: 59 VDEFGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 G + A R +++ V R + G I++ Sbjct: 44 TLRNGLNQDLGFSDADRRENIRRTAEVARLMMDAGFIVIA 83 >gi|325685065|gb|EGD27200.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 220 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 53/171 (30%), Gaps = 37/171 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L + L + E P +L + Sbjct: 10 IVLSGPIGAGKSSLTSILAKHL---GSTAYY-EEVNNNP--------VLPLYYKDMKRYT 57 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111 + E I A +L DR +D+ A YQ Sbjct: 58 FLLNTYFLNKRLAE--INAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY--- 111 Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H +D++ E PD I + + +D LKR+ R E D Sbjct: 112 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRGREFEQLDSD 160 >gi|316968511|gb|EFV52782.1| thymidylate kinase [Trichinella spiralis] Length = 118 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 13/87 (14%) Query: 101 SSYAYQGERDSS---QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + ++G S Q L D PD +D+ + ++NR Sbjct: 7 ALIVFEGLDRSGKTTQGLDFDWCMNADRGLPQPDVVFFVDVKPET----LKNRGEF---- 58 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQ 184 ++ F+ + K R + + Sbjct: 59 GVERFDDE--EFQRKVRHNYQRLTDKY 83 Score = 41.9 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 3 SGLFISFEGIEGAGKTTH 20 G I FEG++ +GKTT Sbjct: 5 RGALIVFEGLDRSGKTTQ 22 >gi|61200776|gb|AAX39813.1| thymidine kinase [Bohle iridovirus] Length = 195 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G GAGK+T + L+ Y+V + + L +F ++ Sbjct: 7 IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAY------QGERDSSQHLFLDS 119 + ++ + + R A ++++ +R + + QG+ ++H L Sbjct: 60 KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCDVAMEQGQILPAEHDMLVQ 112 Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E +P D I L+ P + ++R+ R E V F Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERGIP-------VEYLSSLHSKF- 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PD S + V N + ++ ++V + V Sbjct: 162 ---ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194 >gi|225716338|gb|ACO14015.1| UMP-CMP kinase [Esox lucius] Length = 219 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 62/211 (29%), Gaps = 37/211 (17%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + + L + R G+ + + + Sbjct: 33 GGPGAGKGTQCAKIVENYSYTHLSA-GDLLRAERNREGSEFGQLIDSYIKEGNIVPVEIT 91 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + A ++ L++G R D+ + D + Sbjct: 92 IKLLRKAMEETMQIDEKKFRFLIDGFP----RNEDNFKGWTSVMDGKADVKF-------- 139 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182 + D ++ + R R + + + + KR Q FL R Sbjct: 140 -------VLFFDCSNEVCIDRCLERGKSSGRSDGNR---ESL---RKRIQTFLQSTRPIV 186 Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + H VD++ S V ++ I+ + Sbjct: 187 SLYEKQGKVHTVDASRSVDEVFADVKAILDK 217 >gi|91080861|ref|XP_971851.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase 42 kda subunit [Tribolium castaneum] gi|270006430|gb|EFA02878.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Tribolium castaneum] Length = 403 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 57/177 (32%), Gaps = 25/177 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL-----QRKNYDVHVTREPGGTPA-----------AE 48 + EG AGK+ L L N D+ + G + Sbjct: 72 KIVVVEGPVAAGKSKFAKELAEELDMLYMPEANLDMVYINDYGYDLRQLDEQLPESCRSF 131 Query: 49 AARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105 + L + ++ + + + L G+ ++ DR S + + Sbjct: 132 DVKDFLRTPKHR--NTATFQLMQYNTKYSQYIDALAHVLSTGQGVVLDRCCYSDFVFVEA 189 Query: 106 ---QGERDSSQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 QG + + +++ ++ E+ P I LD+PV+ + ++ R E Sbjct: 190 MFSQGYLSKAAYKGYYEVRQNTINELLRPHLLIYLDVPVNKVQENIKKRALPFEKNT 246 >gi|212696418|ref|ZP_03304546.1| hypothetical protein ANHYDRO_00956 [Anaerococcus hydrogenalis DSM 7454] gi|212676590|gb|EEB36197.1| hypothetical protein ANHYDRO_00956 [Anaerococcus hydrogenalis DSM 7454] Length = 51 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 8/49 (16%), Positives = 25/49 (51%) Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ +K + ++D+++ D +D+ S V N L+ + ++++ Sbjct: 2 ILFTKKTYEGYIDLSKRFKDEIISIDANKSLDLVVNNCLDEIKTYLKEK 50 >gi|115502295|sp|Q0MQB6|NDUAA_GORGO RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|111662245|gb|ABH12227.1| mitochondrial complex I subunit NDUFA10 [Gorilla gorilla] Length = 355 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|34557834|ref|NP_907649.1| shikimate kinase [Wolinella succinogenes DSM 1740] gi|34483552|emb|CAE10549.1| SHIKIMATE KINASE [Wolinella succinogenes] Length = 166 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 61/203 (30%), Gaps = 60/203 (29%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ +L + + L D E + A Sbjct: 16 GSGKSSVARILA---KESGH---------------------LWVDTDSLLELREGMSVAQ 51 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP--- 130 H E R AL A+Q + + IS MP Sbjct: 52 IFEQHKEEGFR-ALER------------ELAFQMRHSLQESI-------ISTGGGMPLFC 91 Query: 131 DC-----TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 D LDLP + L+R+ + D K + +RR +L +A Sbjct: 92 DLSSLGKLFFLDLPFEAILERLSKEERAKRPLLNDL--SKAKALFNQRRSSYLHLAN--- 146 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 H + + S VA IL+++ Sbjct: 147 ---HTLQADQSPLKVAQEILSLL 166 >gi|261822555|ref|YP_003260661.1| shikimate kinase II [Pectobacterium wasabiae WPP163] gi|261606568|gb|ACX89054.1| Shikimate kinase [Pectobacterium wasabiae WPP163] Length = 173 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 44/211 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G G GKTT L + L YD T V+ G Sbjct: 1 MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AL + + +R++ ++ G + Sbjct: 56 GFRQRESL-----------------ALQQ---VTSNRYIVAT----GGGMVLAEANRRFM 91 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178 + Q + I L ++ +R++ + L +++ R+ + Sbjct: 92 HD---QGI----VIYLHANAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +A H++D++ + +++ N+L + Sbjct: 145 GVAH------HVIDASQTPEAIVANVLKALR 169 >gi|307565265|ref|ZP_07627758.1| deoxynucleoside kinase [Prevotella amnii CRIS 21A-A] gi|307345934|gb|EFN91278.1| deoxynucleoside kinase [Prevotella amnii CRIS 21A-A] Length = 204 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 36/201 (17%) Query: 7 ISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I+ G G+GKTT +L + +L R + + + + Sbjct: 3 IAIAGNIGSGKTTLTKMLAKKYNWLPR------FESVDYNPYLEDYYKDL------KRWS 50 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHL 115 E D +E K ++ DR + ++YA D Sbjct: 51 FPMEIFFLKERFKDLLE-----ISKCDKHVVQDRSIYEGVYVFTANNYAMGNLDDRDFET 105 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +++ ++++ +PD I L V + ++ R E + + E + Sbjct: 106 YMELFKDLTDVVKIPDLMIYLRSSVSHLVANIEKRGRSYEQ-------KMPLGYLENINK 158 Query: 176 IFLD-IARNQPDRCHIVDSAH 195 + D I + + ++D+ Sbjct: 159 RYDDFIMKKYKGKVLVIDADK 179 >gi|167754093|ref|ZP_02426220.1| hypothetical protein ALIPUT_02381 [Alistipes putredinis DSM 17216] gi|167658718|gb|EDS02848.1| hypothetical protein ALIPUT_02381 [Alistipes putredinis DSM 17216] Length = 192 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 70/215 (32%), Gaps = 34/215 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G GK T + LK + D T R + + G E Sbjct: 4 IVLFGAPGCGKGTQAARLKE---KYGIDHVST--------GNVIREEI--ARGTKLGKEM 50 Query: 67 EAIVFAAARL--DHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E+ + V ++I + K + D F ++ +Q E + Sbjct: 51 ESYITTGRLAPDQVVIDMIADYIAAHKHAKGNIFDGFPRTT--HQAEEFD---------R 99 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +S Q + D I +D+P + +KR+ R +ES D + + K I Sbjct: 100 MLSEQGLKVDVMIYMDVPEEELVKRILLRG--KESGRADDASEEVIRDRIKVYHEQTAIV 157 Query: 182 RNQ---PDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + ++ + V I ++ + + Sbjct: 158 ADFYAKQGKFADINGLGTMDEVFDRICQVIDSIRK 192 >gi|91085741|ref|XP_973638.1| PREDICTED: similar to cytidylate kinase [Tribolium castaneum] gi|270010114|gb|EFA06562.1| hypothetical protein TcasGA2_TC009473 [Tribolium castaneum] Length = 193 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 44/207 (21%) Query: 11 GIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G G GK T + + + R+ + E + + Sbjct: 11 GPPGVGKGTQCRKIASYYGFVHISAGELLRRERQVRNSVHGELIDSCIKDGKIVPAEITC 70 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEISV 125 + + H+E + DRFL + E + D ++ + Sbjct: 71 KLL------ERHMEESQQ-----------DRFLIDGFPRNLENREGWSRTIGDKVEVMF- 112 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEK----RRQIF 177 + +D PV++ ++R NR + S D E++ V H K + Sbjct: 113 -------VLFIDCPVEVCIERCLNRGAAAGSGRFDDTIEVIEKR-VATHLKETQPTVDYY 164 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNI 204 ++ + +VD S +V +I Sbjct: 165 REL-----NLLRVVDGNKSEDAVFEDI 186 >gi|70732787|ref|YP_262550.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase [Pseudomonas fluorescens Pf-5] gi|68347086|gb|AAY94692.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase [Pseudomonas fluorescens Pf-5] Length = 625 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 34/148 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T + L++ L + R +L Sbjct: 453 HKGKVIWFTGLSGSGKSTVANALEKELHAQGK-----------------RTYILDGDNVR 495 Query: 62 FGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G + A R++ V V R + G I++ + + + Sbjct: 496 QGLNKDLGFTDADRVENIRRVAEVARLMMDAGLIVMT-----AFISPFRAEREMARQLIG 550 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 I + +D P+++ +R Sbjct: 551 EDNFIE---------VFVDTPLEVCEQR 569 >gi|300811219|ref|ZP_07091726.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497806|gb|EFK32821.1| deoxyadenosine kinase [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 215 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 52/171 (30%), Gaps = 37/171 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L + L E + +L + Sbjct: 5 IVLSGPIGAGKSSLTSILAKHL------------GSTAYYEEVNNNPVLPLYYKDMKRYT 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----------LDSSYA----YQGERDS 111 + E I A +L DR +D+ A YQ Sbjct: 53 FLLNTYFLNKRLAE--INAAAGNHNDVL-DRSIYEDLLFFNMNVDNGVADPTEYQIY--- 106 Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H +D++ E PD I + + +D LKR+ R E D Sbjct: 107 --HDLMDNMMEDVPGNPRKKPDLLIYIHVSLDTMLKRIGKRGREFEQLDSD 155 >gi|198436210|ref|XP_002131226.1| PREDICTED: similar to Adenylate kinase isoenzyme 1 (AK 1) (ATP-AMP transphosphorylase 1) (Myokinase) [Ciona intestinalis] Length = 327 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 73/227 (32%), Gaps = 53/227 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVL 54 M+S + G G+GK T + + + D+ G+P E + ++ Sbjct: 139 MDSKKIVFVIGGPGSGKGTQCEKIVE---KYGFTHFSSGDLLRAEVNSGSPQGEELKQMM 195 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + + H E +G ++ D + R+ Q Sbjct: 196 ERGDLVPMS--TVLKLIKDNMAAHTE-------SKGFLV--DGY---------PREVQQG 235 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE---RKDVMI 169 + + + P CT +L + V + +KR+ R S +D E RK + Sbjct: 236 IEFEQ-------SIAP-CTFVLWVDVAQETMVKRLLKRAET--SGRVDDNEETIRKRLKT 285 Query: 170 H----EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 E + ++ VDS V +++ NI E + Sbjct: 286 FVESTEPVIDYYKAQ-----NKVRRVDSEQPVDDVFSDVQNIFKEFL 327 >gi|15668837|ref|NP_247640.1| cytidylate kinase [Methanocaldococcus jannaschii DSM 2661] gi|2496101|sp|Q58071|KCY_METJA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|1591369|gb|AAB98651.1| cytidylate kinase (cmk) [Methanocaldococcus jannaschii DSM 2661] Length = 178 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 38/92 (41%), Gaps = 1/92 (1%) Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI P+++ +R+ R ++ + L ++ ++ ++I+ Sbjct: 85 WMLLKNGIKPDLTIWFKAPLEVRAERISKRENIDKDVALKKMIEREASEKKRYKEIYNID 144 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211 + ++D++ + V + + + L Sbjct: 145 LDDLSIYDLVIDTSKWDVEGVFNIVSSAIDNL 176 >gi|303389586|ref|XP_003073025.1| putative adenylate kinase [Encephalitozoon intestinalis ATCC 50506] gi|303302169|gb|ADM11665.1| putative adenylate kinase [Encephalitozoon intestinalis ATCC 50506] Length = 100 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 31/123 (25%) Query: 95 CDRFLDSSYAYQGERDSSQHLFL-DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 DR++ Y R + Q L DS+ D I +D+ D + R+ R Sbjct: 1 MDRYILDGY----PRRTDQAEMLGDSV----------DLVIFIDVDKDTCIHRICKRNHG 46 Query: 154 RESACLDYFERKDVMIHEKRRQIF-------LDIARNQPDRCHIVDSAHSFQSVATNILN 206 R+ + + KR ++ L++ ++ + VD S +++ + I Sbjct: 47 RDDD--------EEEVGRKRYDVYTKETMPILELYKSY-GKIVRVDGNGSPETIFSKICG 97 Query: 207 IVW 209 I+ Sbjct: 98 IIE 100 >gi|212721146|ref|NP_001132382.1| hypothetical protein LOC100193828 [Zea mays] gi|195623514|gb|ACG33587.1| UMP-CMP kinase family protein [Zea mays] Length = 212 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 63/216 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 32 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71 Query: 71 FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114 +I + EGKI+ D+FL + R+ Sbjct: 72 ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKSENDKFLIDGF----PRNEENR 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 +++ +IS P + D + KR+ R R ++ +++ + Sbjct: 118 AAFENVTKIS-----PAFVLFFDCSEEDMEKRLLGRNQGRVDDNIETIKKRFKTFVDSTL 172 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + N D+ +D+A V ++ I Sbjct: 173 PVIEHY-----NSKDKVKKIDAAKPIPEVFEDVKAI 203 >gi|241894872|ref|ZP_04782168.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313] gi|241871880|gb|EER75631.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313] Length = 209 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 28/177 (15%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT +LL L + G P + F + + Sbjct: 10 GVGKTTLTTLLAEHLGTR----PFYEPVEGNPVLP---DYYKNPERFAFSLQIYFLNKRF 62 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGER-------DSSQHLFLDSLQEI--- 123 A I+ AL + +L DR + + E D +++LD L + Sbjct: 63 AM-------IKQALADDNNIL-DRSIYEDALFTAENHKSGNITDVEYNIYLDLLDNMMGE 114 Query: 124 --SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHEKRRQIF 177 + + PD + +D D L R++ R E D E + + R+ F Sbjct: 115 INATAKERPDLLVFIDADFDTILNRIKKRGRDYEQIENDPSLEEYYHRMWNRYREWF 171 >gi|158254992|dbj|BAF83467.1| unnamed protein product [Homo sapiens] Length = 355 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|198433100|ref|XP_002120805.1| PREDICTED: similar to Cytoplasmic dynein 2 heavy chain 1 (Dynein heavy chain isotype 1B) [Ciona intestinalis] Length = 3959 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GKTT +L+ L R V + T P P + + L Sbjct: 1630 VVIVGPSGSGKTTLWHVLRGALSRLGRVVKLHTMNPKSMPRNQLLGKIDLDTRE-----W 1684 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR +V+R L ++CD +++SL + Sbjct: 1685 SDGVLTNSAR-----DVVREPLDVHSWIVCD-------------GDIDPEWIESLNSV 1724 >gi|321398703|emb|CAM71844.2| putative dynein heavy chain [Leishmania infantum JPCM5] Length = 4241 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQR V P P R LL + Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR V++ ++CD +++SL + Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037 >gi|226377703|ref|YP_002790752.1| deoxyguanosine kinase [Lactobacillus phage Lb338-1] gi|225921481|gb|ACO36994.1| deoxyguanosine kinase [Lactobacillus phage Lb338-1] Length = 240 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 24/197 (12%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VFA 72 G+GK++ +L L E + L+ G + A + VF Sbjct: 9 GSGKSSLTKILSDEL--HTKPFFEPVEDNPVLPLFYKGNKLVESGRRKTNPYAFLLQVFF 66 Query: 73 AARLDHVENVIRPALMEGKILLCDR--FLDSSYA---Y------QGERDSSQHLFLDSLQ 121 R +I+ A+ + +L DR + DS + Y Q E + Q L + ++ Sbjct: 67 LNRR---FKMIKEAMKQDNNVL-DRSIYEDSIFMKMNYEQGHTTQEEWNIYQSLLRNMME 122 Query: 122 EI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 E+ + + PD +++ + D + R++ R E D V + + D Sbjct: 123 ELPYAAHKKSPDLMVLIKVNYDTMINRIEKRGRKFEQIKADP---SLVSYYNDLIARYED 179 Query: 180 IARNQPDR-CHIVDSAH 195 + ++D Sbjct: 180 WEKEYNQSPLLVIDGNK 196 >gi|225865638|ref|YP_002751016.1| hypothetical protein BCA_3750 [Bacillus cereus 03BB102] gi|225790905|gb|ACO31122.1| conserved hypothetical protein [Bacillus cereus 03BB102] Length = 192 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 5 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 54 ----FIANQKMFIEAKIKKFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151 >gi|146099819|ref|XP_001468756.1| dynein heavy chain [Leishmania infantum] Length = 4241 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQR V P P R LL + Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR V++ ++CD +++SL + Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037 >gi|82800128|gb|ABB92339.1| thymidine kinase [Tiger frog virus] Length = 195 Score = 45.4 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G GAGK+T + L+ Y+V + + L +F ++ Sbjct: 7 IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFL-----DSSYAY-QGERDSSQHLFLDS 119 + ++ + + R A ++++ +R + A QG+ ++H L Sbjct: 60 KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLVQ 112 Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E +P D I L+ P + ++R+ R E V F Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF- 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PD S + V N + ++ ++V + V Sbjct: 162 ---ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194 >gi|294671317|ref|ZP_06736168.1| hypothetical protein NEIELOOT_03026 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291306949|gb|EFE48192.1| hypothetical protein NEIELOOT_03026 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 244 Score = 45.4 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 37/187 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I EG G+GK+ L + ++T P P + L G Sbjct: 33 YIVVEGSIGSGKSALARRLAEYFNAL----YLTESPETNPFLD-----LFYQNAANHGLA 83 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKI--------------LLCDRFLDSSYAYQGERDS 111 E F R ++ + G++ ++ D D+ A + Sbjct: 84 TELH-FLMRRAKAIDIINAEETRNGRVVADFLLEKDQIFVPVVLD---DNQQA------N 133 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIH 170 Q+LF + ++ +PD I L + +R+ +R + L+ F + IH Sbjct: 134 EQNLFWEIKHKVMPDMPLPDLVIYLQTGNEAAQRRLVSRNGV---GALNLFPSGYLNQIH 190 Query: 171 EKRRQIF 177 E+ R+ F Sbjct: 191 EEYRRFF 197 >gi|224417678|ref|ZP_03655684.1| shikimate kinase [Helicobacter canadensis MIT 98-5491] gi|313141222|ref|ZP_07803415.1| shikimate kinase [Helicobacter canadensis MIT 98-5491] gi|313130253|gb|EFR47870.1| shikimate kinase [Helicobacter canadensis MIT 98-5491] Length = 166 Score = 45.4 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 59/196 (30%), Gaps = 46/196 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VFA 72 G+GK++ L + + D + E + G F A +F Sbjct: 13 GSGKSSVAKALYQHTRSLILDSDLMIENNEN---MTIPEIFSQKGEQYFRDLERAFCLFV 69 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 + + H ++ ++++ Sbjct: 70 SQNIRHC-------------IIST--------------GGGMPMFCDVKQMG-------K 95 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 LDL + L R+ L+ + ++ + +++KR Q++ D A ++ Sbjct: 96 VFFLDLSFEDILLRLSKEERLKRPLFKN--QKAALELYQKRYQVYKDSAH------FCIN 147 Query: 193 SAHSFQSVATNILNIV 208 + S + IL+ + Sbjct: 148 ANRSIPEITQEILDCL 163 >gi|7076771|emb|CAB75933.1| URIDYLATE KINASE-like protein [Arabidopsis thaliana] Length = 210 Score = 45.4 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 61/213 (28%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S Sbjct: 34 GGPGSGKGTQCANVVKHFS-----------YTHFSAGDLLRAEIKSGSE----------- 71 Query: 71 FAAARLDHVENVIRPALMEGKIL--------LC--------DRFLDSSYAYQGERDSSQH 114 F A +I+ + EG+I+ LC D+FL + R+ Sbjct: 72 FGA--------MIQSMIAEGRIVPSEITVKLLCKAMEESGNDKFLIDGF----PRNEENR 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +++ I P + D P + +R+ +R RE ++ +++ + E Sbjct: 120 NVFENVARI-----EPAFVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVEST- 173 Query: 175 QIFLDIAR--NQPDRCHIVDSAHSFQSVATNIL 205 L I + +++A S + V + Sbjct: 174 ---LPIISYYESKGKLRKINAAKSSEEVFEAVR 203 >gi|322502793|emb|CBZ37876.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 4241 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQR V P P R LL + Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR V++ ++CD +++SL + Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037 >gi|238809905|dbj|BAH69695.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 230 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 32/223 (14%), Positives = 71/223 (31%), Gaps = 21/223 (9%) Query: 1 MNSGLFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 M + I GI G +GK+T L + + + E + + Sbjct: 1 MKKEVIIMVIGISGMISSGKSTLTRNLVKHYKNS--MMLKEYEEDDDVFNTFLKWLYEKQ 58 Query: 58 GVDEFGAEAEAI-VFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDS 111 G ++ + + D + + + DRF Y + + Sbjct: 59 PNLTIGFQSYVVENHTSKLADCFKKFSEKGYKYKDNHIFLDRFSIEHYIFANVNLRTKGK 118 Query: 112 SQHLFLDSL-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 D+L + ++ PD I LD+ D KR+ R E+ + K+ Sbjct: 119 KYLEGYDALFSHLITKDETPDLAIFLDMTFDTFKKRLFERGREVETENWN----KNKDYF 174 Query: 171 EKRRQIFLDI----ARNQPDRCHIVDS-AHSFQSVATNILNIV 208 + ++ + A+ I+++ + + V + ++ Sbjct: 175 RELYDLYKPLFIKQAKKYDLNYVIIETDNLTEKQVFEKAVEVI 217 >gi|191639408|ref|YP_001988574.1| adenylate kinase [Lactobacillus casei BL23] gi|226743884|sp|B3WAJ7|KAD_LACCB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|190713710|emb|CAQ67716.1| Adenylate kinase (ATP-AMP transphosphorylase) (AK) [Lactobacillus casei BL23] gi|327383496|gb|AEA54972.1| Adenylate kinase [Lactobacillus casei LC2W] gi|327386689|gb|AEA58163.1| Adenylate kinase [Lactobacillus casei BD-II] Length = 218 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 74/244 (30%), Gaps = 73/244 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T ++ T + R + G EA++ + Sbjct: 7 GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKSFI 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + V + + +++ ++ D D+ Y G + Q ++L+ I+ P Sbjct: 54 ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106 Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166 D I +D+ + R+ R + ++F+R+D Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166 Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +EK + L H V+ V I I+ Sbjct: 167 ATVKNRLKVNIEMNTPLLDFYEK--KGLL----------HTVNGDQDIDKVFAEIKAILA 214 Query: 210 ELVQ 213 + + Sbjct: 215 AVAK 218 >gi|146342053|ref|YP_001207101.1| putative bifunctional sulfate adenylyltransferase/adenylyl-sulfate kinase CysN/CysC [Bradyrhizobium sp. ORS278] gi|146194859|emb|CAL78884.1| putative CysN/CysC bifunctional enzyme: Sulfate adenylyltransferase (SAT) subunit 1 (N-terminal); Adenylyl-sulfate kinase (APS kinase)(C-terminal) [Bradyrhizobium sp. ORS278] Length = 620 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 40/144 (27%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T + L++ L + +LL G + Sbjct: 455 FTGLSGAGKSTIANCLEKKLHTAGFHT-----------------MLLDGDNIRQGLNRDL 497 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + + G I++C S Y S + L Sbjct: 498 GFTEADRVENIRRVGEVAKLFVDAGLIVIC--SFISPY-------RSDRDMVREL----- 543 Query: 126 QEVMPDCTI---ILDLPVDIGLKR 146 MP T +D P++ ++R Sbjct: 544 ---MPPATFFEVFVDTPLEECMRR 564 >gi|89100556|ref|ZP_01173416.1| uridine kinase [Bacillus sp. NRRL B-14911] gi|89084743|gb|EAR63884.1| uridine kinase [Bacillus sp. NRRL B-14911] Length = 200 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 21/179 (11%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 FI GI+G +GKTT ++ LK++LQ + + + R+ + G +E Sbjct: 18 RFIL--GIDGLSRSGKTTLVNRLKQWLQAEGHPAVIFHLDDYIED----RNKRYNTGNEE 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + F ++++ + + G L +++ + ++ + + L ++ Sbjct: 72 WYEY----YFLQWDAEYLKQELFSKVHTGTELTLRFYVEQNDSHFLKNTTIPRKCLIIIE 127 Query: 122 EISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +Q P D + LD P + KR + + + + + + E R Sbjct: 128 GVFLQ--RPEWRNHLDYIVYLDCPRETRFKREKEATRQKVDKFENRYWKAEDHYLETVR 184 >gi|218245084|ref|YP_002370455.1| guanylate kinase [Cyanothece sp. PCC 8801] gi|218165562|gb|ACK64299.1| Guanylate kinase [Cyanothece sp. PCC 8801] Length = 188 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 39/216 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+SG I G G GK T + L Q + TR P G + + Sbjct: 1 MSSGKLIVLTGPSGVGKGTLVRSLLARHQNLYLSISATTRSPRGGEIDGQDYYFVSVPQF 60 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + + +A + + +G +L + + Sbjct: 61 EEMITQENLLEWANYAGNYYGTPRQKVEEKIDQGITVLL---------------EIELVG 105 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++E + IL V+ +R++ R + E A ER Sbjct: 106 ARKIRETFPTAIR---IFILPPSVEELERRLRGRGTEAEEAIARRLERAK---------- 152 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++A + +V+ + L + EL+ Sbjct: 153 -EELAASSEFNYTVVN-----DEL-EKALEALEELI 181 >gi|115392071|ref|NP_001065273.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial precursor [Pan troglodytes] gi|115502296|sp|Q0MQB7|NDUAA_PANTR RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|111662243|gb|ABH12226.1| mitochondrial complex I subunit NDUFA10 [Pan troglodytes] Length = 355 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|54041625|sp|P28604|NODQ_AZOBR RecName: Full=Bifunctional enzyme nodQ; AltName: Full=Nodulation protein Q; Includes: RecName: Full=Sulfate adenylyltransferase subunit 1; AltName: Full=ATP-sulfurylase large subunit; AltName: Full=Sulfate adenylate transferase; Short=SAT; Includes: RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase gi|46241618|gb|AAS83003.1| sulfate adenylate transferase [Azospirillum brasilense] Length = 620 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 40/144 (27%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + ++R L + ++L G + Sbjct: 451 FTGLSGSGKSTIANRVERRLHTLGHHT-----------------MMLDGDNVRLGLNRDL 493 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + G I+LC A+ + + +V Sbjct: 494 GFTDADRVENIRRVGEVAKLMTEAGLIVLC--------AFIAPFRAERE---------AV 536 Query: 126 QEVMPD---CTIILDLPVDIGLKR 146 + ++PD + +D P+D ++R Sbjct: 537 RALLPDGAFLEVFVDTPLDECMRR 560 >gi|239993158|ref|ZP_04713682.1| uridine kinase [Alteromonas macleodii ATCC 27126] Length = 207 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 32/227 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S L I+ G G+GK+ L + V V RE A + Sbjct: 1 MQSPLIIAISGASGSGKSLFTKNLFNGFSAQGRPVQVLREDHYYRAQDHLPMEQREKNNY 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E + A H++ AL +G+ + + ++ E + + L Sbjct: 61 DHPNAFEHELLKA----HLQ-----ALRDGQPIDYPHYCYKTHTRLPETERLNPAPVIIL 111 Query: 121 QEI---SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + I + +++P D I +D P+DI L R R E E + Sbjct: 112 EGIMLLARTDLLPLYDVKIFIDTPLDICLMRRMMRDLKERGRS---IESVAKQYEETVKP 168 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATN------ILNIVWELVQKRV 216 ++ +P R + V T L+++ +Q+ + Sbjct: 169 MYHQFI--EPSRF-------TADVVVTQGGKNQIALDVIKSHIQQAL 206 >gi|313680445|ref|YP_004058184.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977] gi|313153160|gb|ADR37011.1| deoxynucleoside kinase [Oceanithermus profundus DSM 14977] Length = 208 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 56/166 (33%), Gaps = 22/166 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ G G+GK+T LL + + V+ E L G + Sbjct: 1 MYIAIAGNIGSGKSTLTRLLAARYRL--HPVYEAVEENP-----YLADFYLDMG--RWAF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-SYAY----QGERDSSQHLFL 117 ++ A H+ I P ++ DR F D+ +A QG Sbjct: 52 HSQVFFLAKRLDQHLSE-INPRRR----VVQDRTVFEDAHVFARNLRQQGHFSDRDWATY 106 Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 +L + + + PD I + V R+ R E A + + Sbjct: 107 TALFQGVARALRQPDLLIYIHAGVTTLKARIAKRGRDYERAIPEEY 152 >gi|71083412|ref|YP_266131.1| guanylate kinase [Candidatus Pelagibacter ubique HTCC1062] gi|119371258|sp|Q4FMR1|KGUA_PELUB RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|71062525|gb|AAZ21528.1| Guanylate kinase [Candidatus Pelagibacter ubique HTCC1062] Length = 210 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 23/164 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ + GAGKTT + LL + H TR+P A+ + + + Sbjct: 7 GIMVILSSPSGAGKTTLVKLLSKNKNFHISISHTTRKPRLNEIADKDYYFVDHDKFENLI 66 Query: 64 AEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + +A + L +G+ ++ D +QG L Sbjct: 67 KNEEFLEYAKVFNHLYGTTRTPVIEKLEKGENVIFD------IDWQGADQIKNKKLNYKL 120 Query: 121 QEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 T + LP +I +R+ NR + + Sbjct: 121 -----------ITFFI-LPPSKEILFERLSNRDMKDKLIVEERM 152 >gi|4758768|ref|NP_004535.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial precursor [Homo sapiens] gi|6093592|sp|O95299|NDUAA_HUMAN RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|4191348|gb|AAD09755.1| NADH-ubiquinone oxidoreductase 42 kDa subunit [Homo sapiens] gi|13097333|gb|AAH03417.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa [Homo sapiens] gi|119591579|gb|EAW71173.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa, isoform CRA_b [Homo sapiens] gi|119591581|gb|EAW71175.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa, isoform CRA_b [Homo sapiens] gi|123980216|gb|ABM81937.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa [synthetic construct] gi|123995031|gb|ABM85117.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa [synthetic construct] Length = 355 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|328912204|gb|AEB63800.1| SPBc2 prophage-derived uncharacterized protein yorR [Bacillus amyloliquefaciens LL3] Length = 175 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 44/146 (30%), Gaps = 32/146 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG + K+T L + L Y V G+ + S Sbjct: 4 IILEGTDCCYKSTIADKLSKEL---GYPVIK-----GSSF-----ELAKSGNEK------ 44 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +F +H L + ++ DR++ S+ Y + L + + I + Sbjct: 45 ---LF-----EHFNK-----LADEDNVIIDRYIYSNLVYAKKFKDYSILTEEQQRTIEKK 91 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYS 152 I L + +R+ R Sbjct: 92 IRDKAKVIYLHADPKVIKQRLLERGD 117 >gi|33150572|gb|AAP97164.1|AF087854_1 NADH dehydrogenase [Homo sapiens] Length = 354 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 122 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 180 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 181 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 225 >gi|298250842|ref|ZP_06974646.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963] gi|297548846|gb|EFH82713.1| conserved hypothetical protein [Ktedonobacter racemifer DSM 44963] Length = 171 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 69/203 (33%), Gaps = 44/203 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG+ G GKT+ + LQR+ Y R + ++ Sbjct: 8 IEGVSGTGKTS----VCTELQRRGYQAIH-----------GDRELRYQGDLETGTP---T 49 Query: 69 IVFAAARLDHVENVIRP--ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +F + R I AL+ K D + + + FL+ L Sbjct: 50 DIFTSDRHKSPLWDIEKVQALIANK--------DEAVTFFCGGSRNFSKFLELL------ 95 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 D IL++ +D L+R+ R +L + E ++++ + Q DI P Sbjct: 96 ----DGVFILEVDLDTCLRRIDERVALDPTDWGGKPEEREII--ARLHQTKEDI----PS 145 Query: 187 RCHIVDSAHSFQSVATNILNIVW 209 ++D+ SV IL V Sbjct: 146 SGIVLDATQPLVSVVDEILRHVR 168 >gi|254722532|ref|ZP_05184320.1| hypothetical protein BantA1_08694 [Bacillus anthracis str. A1055] Length = 186 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 72/222 (32%), Gaps = 55/222 (24%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56 MN I+ + G GKTT L L ++ R T + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 53 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + + + H+ IR + ++ I+ D +AY Sbjct: 54 --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 91 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R +R D+ E IH Sbjct: 92 ---LNSEMRQFI--DVTIFIDTPLDIAMARRISR---------DFKEDTISEIHNDLEHY 137 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 138 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 179 >gi|225466049|ref|XP_002263160.1| PREDICTED: similar to Adenylate kinase [Vitis vinifera] gi|296084179|emb|CBI24567.3| unnamed protein product [Vitis vinifera] Length = 238 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 72/214 (33%), Gaps = 52/214 (24%) Query: 6 FISFE-GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+F G G+GK T + + T A E R + Sbjct: 53 FITFVVGGPGSGKGTQCAKIVE-----------TFGFTHISAGELLRREI---------- 91 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL 117 + +H ++I ++ EGKI+ L ++ ++SS + Sbjct: 92 --------SCNSEH-GSMILDSIREGKIVPSEVTVKLIEKEMESSK---NNKFLIDGFPR 139 Query: 118 DSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI---HE 171 I+ + P+ + P + +KR+ +R R +D +++ + H Sbjct: 140 TEENRIAFERVIGAEPNFVLFFHCPEEEMVKRLLSRNEGRVDDNIDTIKKRLEVFTALHL 199 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNIL 205 + + ++ + + +++ + + + Sbjct: 200 PVIKYY-----SEKGKLYKINAVGTVDEIFEQVR 228 >gi|313678155|ref|YP_004055895.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45] gi|312950336|gb|ADR24931.1| deoxynucleoside kinase family protein [Mycoplasma bovis PG45] Length = 217 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 34/221 (15%), Positives = 77/221 (34%), Gaps = 21/221 (9%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60 + I GI G +GK+T + L + + + P + + + Sbjct: 1 MII---GISGMISSGKSTLVKKLSDYYPNSIFIEEFSENDPVFNTFLKWCYEKQPNTDIA 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-HLFLDS 119 E++ + H + ++ ++ + DRF+ Y + S + + ++ Sbjct: 58 FQSFLVESL--TDSFYKHKKEFLKNHNIQDDHIFLDRFILEHYIFAKATLSQKNKKYFEA 115 Query: 120 LQEISVQ----EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEKR 173 +++ V + PD + LD+ +R+ R E +D F + Sbjct: 116 FEKLFVHIYDSKCNPDFALFLDISWQTFKQRIFQRGRKVE---IDNFYANEEYFKYLNNI 172 Query: 174 RQ-IFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELV 212 + F+D+ I+DS S SV + + + + Sbjct: 173 YKSTFVDLLSKYNIPYVIIDSNNKSHSSVLSEAIAAIENHL 213 >gi|42781619|ref|NP_978866.1| hypothetical protein BCE_2558 [Bacillus cereus ATCC 10987] gi|42737542|gb|AAS41474.1| hypothetical protein BCE_2558 [Bacillus cereus ATCC 10987] Length = 186 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 69/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L T PA + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNSKALYFDTYNFDNCPA--DICKWIDDGAN 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + H+ IR + ++ I+ D +AY + F+ Sbjct: 59 YD----EWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY---LNGEMRQFI-- 100 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 D TI +D P+DI + R R D+ E IH Sbjct: 101 -----------DVTIFIDTPLDIAMARRILR---------DFKEDAMSEIHNDLKHYITY 140 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 179 >gi|33303941|gb|AAQ02478.1| NADH dehydrogenase ubiquinone 1 alpha subcomplex 10 [synthetic construct] Length = 356 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|253827028|ref|ZP_04869913.1| shikimate kinase [Helicobacter canadensis MIT 98-5491] gi|253510434|gb|EES89093.1| shikimate kinase [Helicobacter canadensis MIT 98-5491] Length = 182 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 25/196 (12%), Positives = 59/196 (30%), Gaps = 46/196 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VFA 72 G+GK++ L + + D + E + G F A +F Sbjct: 29 GSGKSSVAKALYQHTRSLILDSDLMIENNEN---MTIPEIFSQKGEQYFRDLERAFCLFV 85 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 + + H ++ ++++ Sbjct: 86 SQNIRHC-------------IIST--------------GGGMPMFCDVKQMG-------K 111 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 LDL + L R+ L+ + ++ + +++KR Q++ D A ++ Sbjct: 112 VFFLDLSFEDILLRLSKEERLKRPLFKN--QKAALELYQKRYQVYKDSAH------FCIN 163 Query: 193 SAHSFQSVATNILNIV 208 + S + IL+ + Sbjct: 164 ANRSIPEITQEILDCL 179 >gi|142425|gb|AAA22186.1| nodQ [Azospirillum brasilense] Length = 620 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 40/144 (27%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + ++R L + ++L G + Sbjct: 451 FTGLSGSGKSTIANRVERRLHTLGHHT-----------------MMLDGDNVRLGLNRDL 493 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + G I+LC A+ + + +V Sbjct: 494 GFTDADRVENIRRVGEVAKLMTEAGLIVLC--------AFIAPFRAERE---------AV 536 Query: 126 QEVMPD---CTIILDLPVDIGLKR 146 + ++PD + +D P+D ++R Sbjct: 537 RALLPDGAFLEVFVDTPLDECMRR 560 >gi|194290643|ref|YP_002006550.1| deoxyguanosine/deoxyadenosine kinase [Cupriavidus taiwanensis LMG 19424] gi|193224478|emb|CAQ70489.1| putative DEOXYGUANOSINE/Deoxyadenosine KINASE [Cupriavidus taiwanensis LMG 19424] Length = 213 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 66/198 (33%), Gaps = 33/198 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G+GKT+ L R LQ + H R P P + Sbjct: 8 IVVEGPVGSGKTSLAQRLARTLQAQELPDHARRSPFLEPF-------YRDPARHALALQL 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQHLFL-DS 119 + AA+L + + G+ ++ DR + S L L D+ Sbjct: 61 WCLTQRAAQLQQ----WQAGVAAGQRMVTNFLIARDR------LHAALTLSEDELALYDA 110 Query: 120 L-QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + +++ D I+L + +R+ R E+ D ++ + Sbjct: 111 IAARLALPPQRADLVIVLQATPSLLRERIVRRGEPGEAGI-------DEHYLQRLAGAYG 163 Query: 179 DIARNQPD-RCHIVDSAH 195 ++ D +VD+AH Sbjct: 164 ELFHRYDDAPVLVVDTAH 181 >gi|134297300|ref|YP_001121035.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Burkholderia vietnamiensis G4] gi|134140457|gb|ABO56200.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Burkholderia vietnamiensis G4] Length = 641 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 20/95 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T + L++ L + R +L Sbjct: 477 HKGKVIWFTGLSGSGKSTIANALEKELHAQGK-----------------RTYILDGDNVR 519 Query: 62 FGAEAEAIVFAAARLD---HVENVIRPALMEGKIL 93 G + A R++ V V + + G I+ Sbjct: 520 QGLNKDLGFTDADRVENIRRVAEVAKLMMDAGLIV 554 >gi|332179212|gb|AEE14901.1| Dephospho-CoA kinase [Thermodesulfobium narugense DSM 14796] Length = 197 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 78/227 (34%), Gaps = 46/227 (20%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----- 54 M GL I+ G +G+GK+ ++ FL R ++V+ E E + + Sbjct: 1 MKKEGLLIAITGPQGSGKSEVLN----FLSRLGFEVYSADEISKKIFNENFQDIYNMFKS 56 Query: 55 ----LSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 + A++ + +E++I P + E + S Sbjct: 57 YFDGRQNYDIQKLRREIALIISKDKFMKKKLEDLIWPKIKE--------YFKSIL----R 104 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 RD + + L E ++++ D I+D P D+ L R+ E Sbjct: 105 RDKIVFVEIPLLFEANMEDDF-DIIWIVDAPFDVRLNRLVKSREYSEEEA---------- 153 Query: 169 IHEKRRQIFLDIARNQPDRCHI----VDSAHSFQSVATNILNIVWEL 211 K R ++C + +D + + V +L+++ L Sbjct: 154 ---KVRMNMQWPPSKPIEKCKVPIYYIDGSQDIEDVKKRVLDLLNSL 197 >gi|45686027|ref|YP_003790.1| deoxynucleoside kinase [Ambystoma tigrinum virus] gi|37722451|gb|AAP33196.1| deoxynucleoside kinase [Ambystoma tigrinum stebbensi virus] Length = 195 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 38/218 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G GAGK+T + L+ Y+V + A+ + L +F ++ Sbjct: 7 IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWAQLFKMALEDPNRWKFSSQL 59 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAY------QGERDSSQHLFLDS 119 + ++ + + R A ++++ +R + + QG+ +++ L Sbjct: 60 KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCDVAMEQGQILPAEYDMLVQ 112 Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E +P D I L+ P + ++R+ R E V F Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAVRGREFERDIP-------VEYLSSLHSNF- 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PD S + V N + ++ +V K V Sbjct: 162 ---ARDPDYIM--SGLESNEVVLANAIELIERIVSKNV 194 >gi|109896861|ref|YP_660116.1| uridine kinase [Pseudoalteromonas atlantica T6c] gi|109699142|gb|ABG39062.1| uridine kinase [Pseudoalteromonas atlantica T6c] Length = 207 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 60/165 (36%), Gaps = 14/165 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCG 58 M++ L I+ G G+GK+ L + V + RE A + + Sbjct: 1 MSAPLVIAISGASGSGKSLFTENLLKEFSEDGKHVQILREDHYYRAQDHLPMEEREKNNY 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF-LDSSYAYQGERDSSQHLFL 117 E E +V L + ++V P + + A + S+ + + Sbjct: 61 DHPKAFEHELLVEHLQALKNWQSVDYPHYC---------YKTHTRLAQTEKLMSAPVIII 111 Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + + ++ QE+ P D I +D P+DI L R R LD Sbjct: 112 EGIMLLANQELQPLFDIKIFVDTPLDICLLRRMKRDIAERGRTLD 156 >gi|302916675|ref|XP_003052148.1| hypothetical protein NECHADRAFT_60116 [Nectria haematococca mpVI 77-13-4] gi|256733087|gb|EEU46435.1| hypothetical protein NECHADRAFT_60116 [Nectria haematococca mpVI 77-13-4] Length = 227 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 63/216 (29%), Gaps = 45/216 (20%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + L L + ++ G+ E + + + + Sbjct: 39 GGPGAGKGTQCAKLVEEHGFTHLSA-GDLLRAEQQRPGSQFGELIKDYIKNGLIVPM-EV 96 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++ A + VI+ + + RFL + +D + Sbjct: 97 TIALLENA-----MTEVIQKSGDKKG-----RFLIDGF----------PRKMDQAVKFEE 136 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182 + D P D+ KR+ R + + E R+ F Sbjct: 137 SVCPAKLVLFFDCPEDVMEKRILERGKTSGRSDDNA---------ESIRKRFRTFIETSM 187 Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++ + +D+ + V ++ + + Sbjct: 188 PVVDHFDKEGKVVKLDATPTPNEVFATTQKVLTQRL 223 >gi|307354347|ref|YP_003895398.1| adenylate kinase [Methanoplanus petrolearius DSM 11571] gi|307157580|gb|ADN36960.1| Adenylate kinase [Methanoplanus petrolearius DSM 11571] Length = 189 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 17/156 (10%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + G+ G GKTT I K L+ +N D + + + Sbjct: 2 GKRVVITGVPGVGKTTVIDGTKEKLKEENIDYTSINFGTCMFEVACEQGKVKNRDEMRKL 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + E + + ++ D + S+ +L L Sbjct: 62 DQMEQKELQKTAAQLIAKI-------QDNVIVD--THCTV-------STPGGYLPGLPSW 105 Query: 124 SVQEVMPDCTIILDLPVD-IGLKRVQNRYSLRESAC 158 +QE+ PD I+++ VD I ++R+++ R++ Sbjct: 106 VLQEMKPDMVILVETDVDQILMRRMKDDTRERDTEG 141 >gi|115394894|ref|XP_001213458.1| uridylate kinase [Aspergillus terreus NIH2624] gi|114193027|gb|EAU34727.1| uridylate kinase [Aspergillus terreus NIH2624] Length = 210 Score = 45.0 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 60/212 (28%), Gaps = 46/212 (21%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T + L R L + RE G+ + R + + Sbjct: 18 GGPGSGKGTQSTNLVRDYGFVHLSAGDLLRAEQVRE--GSQYGDLIRTYIREGKIVPM-- 73 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + + A D ++ +GK RFL G Sbjct: 74 EITVALLSNAMADALKQT--EGQGKGKA----RFLID-----GFPRKLDQAV------FF 116 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182 V P + T+ LD P ++ +R+ R +D E R+ F Sbjct: 117 EDTVCPSELTLFLDCPEEVMEQRLLKRGETSG---------RDDDNAESIRKRFRTFVET 167 Query: 183 --------NQPDRCHIVDSAHSFQSVATNILN 206 D+ V + S V I Sbjct: 168 SMPVVEAFAAQDKVVSVSATGSVDEVYARIRE 199 >gi|242133545|gb|ACS87842.1| putative adenylate kinase [Crithidia sp. ATCC 30255] Length = 220 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 41/238 (17%), Positives = 75/238 (31%), Gaps = 56/238 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREP--GGTPAAEAARHVLLSC 57 LFI G G+GK T L + L N + RE TP + ++ Sbjct: 3 LFIILFGAPGSGKGTVSERLVKEYGFVHLSAGN----LLREEVQAKTPLGLQCKAIM--- 55 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +A + RL H P++ E +L D F L Sbjct: 56 AEGNLIPDALVVDLVCNRLKH------PSVQENG-VLLDGF---------------PRTL 93 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164 +E+S + D + LD+ I L R +R + + D + Sbjct: 94 RQAEELSARGFKFDMMVFLDVSPQILLDRCLSRRLDPVTGRIYNLKSDPPPPEIVDRLQI 153 Query: 165 KDVMI---HEKRRQIF----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + HE R I+ + + +++ + + V + + + +Q + Sbjct: 154 RSDDTKEKHEHRMNIYNKQKEALINHYDGIIVEINADPAIKVVFKTLRKEINKALQNK 211 >gi|284053486|ref|ZP_06383696.1| shikimate kinase [Arthrospira platensis str. Paraca] Length = 204 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 40/201 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L L Y T + +A + + G +EF ++ + Sbjct: 38 GAGKSTVGEILANRLS---YKFFDTDVLISQVSGQAIPEIFSTQGEEEFRNLESQVLSSL 94 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 H+ + G ++ R S + Sbjct: 95 CAYQHLV------VATGGGVVIKRMNWSYLRHG-------------------------II 123 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 + LD+P +R++ + D R D I E RR ++ Q D ++ Sbjct: 124 VWLDVPTHCLYERLKGDTTRPLLQHPDPLTRLD-NILETRRHLY-----QQADISITING 177 Query: 194 AHSFQSVATNILNIVWELVQK 214 +A I+ + ++++ Sbjct: 178 NEKPSEIAEQIITKIPNILKQ 198 >gi|157876329|ref|XP_001686523.1| dynein heavy chain [Leishmania major strain Friedlin] gi|68129597|emb|CAJ08142.1| putative dynein heavy chain [Leishmania major strain Friedlin] Length = 4241 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQ+ V P P R LL + Sbjct: 1943 VVLVGPSGSGKSTLMKVLRRALQQLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR V++ ++CD +++SL + Sbjct: 1998 FDGVLTDAAR-----KVVKEEASARSWIVCD-------------GDIDPAWVESLNSV 2037 >gi|62822188|gb|AAY14737.1| unknown [Homo sapiens] Length = 333 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|222100024|ref|YP_002534592.1| Cytidylate kinase [Thermotoga neapolitana DSM 4359] gi|254807723|sp|B9K8E3|KCY_THENN RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|221572414|gb|ACM23226.1| Cytidylate kinase [Thermotoga neapolitana DSM 4359] Length = 220 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 81/244 (33%), Gaps = 60/244 (24%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAA--EAARHV 53 G I+ +G +GK+T LL L ++ + +E G P++ E Sbjct: 2 GFQIAIDGPAASGKSTIAKLLAERLGFEHLNTGATYRAVAVYLKEKGLNPSSPREELEKA 61 Query: 54 LLSCGVDEFGAEA--------------EAIVFAAARL------DHVENVIRPALMEGKIL 93 L VD EA + A+ +H+ + R + I+ Sbjct: 62 LKDVKVDYRDGRVFINGKDYTEKIQSPEAGILASDFAKLDLVREHLVRIQREICDDKNIV 121 Query: 94 LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRY 151 + E + L PD I L ++ ++R + R Sbjct: 122 V-------------EGRDIGTVVL------------PDAQLKIFLTASLEARIER-KLRE 155 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVD-SAHSFQSVATNILNIVW 209 ++ + E + +I + IA +P + ++D ++ S V IL +V Sbjct: 156 YQKKGLNVSREEVERELISRDTQDSSRKIAPLKPAEDAVVIDTTSMSVNEVLQKILKLVE 215 Query: 210 ELVQ 213 E ++ Sbjct: 216 ERMK 219 >gi|324521183|gb|ADY47799.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10 [Ascaris suum] Length = 336 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 48/117 (41%), Gaps = 9/117 (7%) Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + + + A +F R D N + L G+ ++ +R S + + + Sbjct: 35 EMFYKDPMSDMSAVMRDRIFN-CRFDQYLNAVAHILNTGQGVVLERSPHSDFVFANAMRA 93 Query: 112 SQHLFLDS------LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ + +++ ++ ++ P + LD PV + L+ ++ ++ + + LD Sbjct: 94 KNYIGPEYFKHYFYVRKTALPKLHFWPHLVVYLDAPVSVCLQNIRKEGNVNKVSVLD 150 >gi|196000366|ref|XP_002110051.1| hypothetical protein TRIADDRAFT_53594 [Trichoplax adhaerens] gi|190588175|gb|EDV28217.1| hypothetical protein TRIADDRAFT_53594 [Trichoplax adhaerens] Length = 304 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 25/169 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--FGA 64 I+ EG +GK+T + L N V V EP +++ D +G Sbjct: 87 IAVEGNIASGKSTFLKRL-----ESNPQVEVLAEPLEKWQDLGGDNLIHKMYEDPARWGY 141 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ--- 121 + V H P + +R S+ Y + + L++++ Sbjct: 142 LFQNYVLLTMMDVHNAKQQVPFC------VLERSAYSAR-YCFVENLYKSGLLNNMEYKC 194 Query: 122 -----EISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF 162 + +Q P D + L ++ R++ R E LDY Sbjct: 195 YVEWFDFLMQNCKPKLDLIVYLRATPEVCYSRLKARGRKEEETVSLDYL 243 >gi|119493584|ref|ZP_01624248.1| Adenylate kinase [Lyngbya sp. PCC 8106] gi|119452574|gb|EAW33757.1| Adenylate kinase [Lyngbya sp. PCC 8106] Length = 189 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 51/213 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + L + T E R+ + + Sbjct: 4 GGPGAGKGTQTEGICQHL---DIPSIST--------GEVLRNAIANQTN----------- 41 Query: 71 FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSY--AYQGERDSSQHLFLDSLQEISV 125 + RP + +G+++ + RF+ A + + Q + Sbjct: 42 --------LGQKARPYVEKGELVPDEIMIRFIHQRLLQADVSQGWLLDGYPRTAFQAEEL 93 Query: 126 QEVMPDC------TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQI 176 ++ D I L++P D+ R +R + + R+ + +++ + Sbjct: 94 DFLLEDLGQQLNWAIYLNVPKDVLANRTIHRSRSDDKPLIIR--RRIELFYQRTIPILEY 151 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + DR ++ + V +IL+ + Sbjct: 152 Y-----SPRDRLLDINGNQPPEQVQQDILSQLR 179 >gi|309804873|ref|ZP_07698935.1| deoxyguanosine kinase [Lactobacillus iners LactinV 09V1-c] gi|312871198|ref|ZP_07731296.1| deoxyguanosine kinase [Lactobacillus iners LEAF 3008A-a] gi|308165812|gb|EFO68033.1| deoxyguanosine kinase [Lactobacillus iners LactinV 09V1-c] gi|311093212|gb|EFQ51558.1| deoxyguanosine kinase [Lactobacillus iners LEAF 3008A-a] Length = 221 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 45/229 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L ++L P + Sbjct: 4 IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123 A + L+ I+ AL +L DR + + +Q D + + + E+ Sbjct: 50 YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108 Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173 ++ + PD I + + + +KR+Q R E D E +++ Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYDPTLE----DYYKRL 164 Query: 174 RQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + P ++D V I+ + E+ Sbjct: 165 LTYYQPWYDQYNYSPK--MVIDGDKYDFMNSDDDCDKVLKMIVAKLKEV 211 >gi|212374985|pdb|3DM9|B Chain B, Structures And Conformations In Solution Of The Signal Recognition Particle Receptor From The Archaeon Pyrococcus Furiosus Length = 328 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G G+GKTT I+ L +L+ + V + T A A L G + Sbjct: 132 IXFVGFNGSGKTTTIAKLANWLKNHGFSVVIAA--SDTFRAGAIEQ--LEEHAKRIGVKV 187 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + A + I+ A G ++L D R + D ++I+ Sbjct: 188 IKHSYGADPAAVAYDAIQHAKARGIDVVLID---------TAGRSETNRNLXDEXKKIA- 237 Query: 126 QEVMPDCTII 135 + P+ I Sbjct: 238 RVTKPNLVIF 247 >gi|49477757|ref|YP_036662.1| hypothetical protein BT9727_2336 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329313|gb|AAT59959.1| possible uridine kinase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 186 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 49/217 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 41 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + ++ E V+ P + + + L+ D S+ Y Sbjct: 42 FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 92 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 140 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208 R+ +L+ +P+ ++D A S + I + Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEEL 177 >gi|182624171|ref|ZP_02951958.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] gi|177910787|gb|EDT73147.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] Length = 192 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 52/219 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +N + I+ G+ +GKTT I+ LK+ ++ +H E +++ Sbjct: 4 INKTVIIAVSGVTASGKTTIINELKKNIKSA-KSLHFDDYDFEGEV-EDFYQWVINGAD- 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLD 118 + L+ ++ I + + +L D + +AY+ Sbjct: 61 ----------YNVWNLEPLKEDILKFKGDNETQYILLD-Y---PFAYKN----------- 95 Query: 119 SLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + P DC I ++ P+DI + R R S+ D R+D+ + K Sbjct: 96 -------NLIKPFIDCAIFINTPLDIAMARRVLR--DMHSSTGDEI-REDMSFYLK---- 141 Query: 177 FLDIARNQ------PDRCHIVDSAHSFQSVATNILNIVW 209 + IA + P+ +++D + + I++I+ Sbjct: 142 YARIAYEEMLNTILPNSDYVIDGSMQLAEIVKQIMDIIK 180 >gi|291515315|emb|CBK64525.1| Adenylate kinase [Alistipes shahii WAL 8301] Length = 191 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 44/218 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G GK T LK D T E R DE Sbjct: 4 IVLFGAPGCGKGTQAQRLKEHY---GIDHVST--------GEVIR--------DEIRRGT 44 Query: 67 EAIVFAAARLDHVENVIR-PALMEGKILLC--DRFLDSSY-AYQGERDSSQHLFLDSLQE 122 E +E I+ L +I++ D ++ A D + + + Sbjct: 45 EL-------GQSMEAYIKAGQLAPDEIVIGMIDHYVTGHMNAAGCIFDGFPRTTVQAEEF 97 Query: 123 ---ISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEK----R 173 ++ + D I + +P + ++R+ + + S R + R + ++ + Sbjct: 98 DKILAGHGLKVDVMIDIHVPEEELVRRILLRGKDSGRADDASEEVIRGRLDVYREQTAVV 157 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + A + V+ + + V + I ++ L Sbjct: 158 ADYY---AAQ--GKYASVNGTGTMEEVFSRIAAVIEGL 190 >gi|212709389|ref|ZP_03317517.1| hypothetical protein PROVALCAL_00425 [Providencia alcalifaciens DSM 30120] gi|212688301|gb|EEB47829.1| hypothetical protein PROVALCAL_00425 [Providencia alcalifaciens DSM 30120] Length = 165 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 51/209 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F G G+GKTT L + Y T + A + ++ G + F Sbjct: 1 MFYII-GPRGSGKTTIGKKLAE---KTGYQFIDTDKLILERAGMSIADIVQQQGWNYFR- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +E+ I ++ ++ G ++E Sbjct: 56 -------------QLESQILASIESQDAIVST----------GGGIILAPENQQVMRENG 92 Query: 125 VQEVMPDCTIILDLPVDIGLKR------VQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 I L + +KR + R SL + L+ E + +R I+L Sbjct: 93 T-------VIYLRSTPETLVKRLAAEPQAEQRPSLTGKSLLEEIE----EVMTQRDPIYL 141 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207 A H++D+ S ++ I N+ Sbjct: 142 STAH------HVIDANQSIDAIIKQIANL 164 >gi|222479253|ref|YP_002565490.1| signal recognition particle-docking protein FtsY [Halorubrum lacusprofundi ATCC 49239] gi|222452155|gb|ACM56420.1| signal recognition particle-docking protein FtsY [Halorubrum lacusprofundi ATCC 49239] Length = 371 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L +L + Y + G T A A + D E Sbjct: 177 IVFTGVNGVGKTTSIAKLSEWLADRGYSSVMA--NGDTYRAGANEQI--QEHADRLDREL 232 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + + A ++L D R + + L++I Sbjct: 233 ISHDQGGDPAAVIYDGVEYAEANDIDVVLGD---------TAGRLHTSDDLMAQLEKID- 282 Query: 126 QEVMPDCTIILD 137 + V PD T+ +D Sbjct: 283 RVVAPDMTLFVD 294 >gi|145483401|ref|XP_001427723.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124394806|emb|CAK60325.1| unnamed protein product [Paramecium tetraurelia] Length = 2298 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G GKTT +LK+ ++ V P P R LL ++ Sbjct: 69 VVLVGPSGCGKTTIWKVLKKAHEKLGQQVKTHVMNPKSMP-----RSQLLGNMNNDTREF 123 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +E ++ A+ARL V++ ++ ++CD +++SL + Sbjct: 124 SEGVLTASARL-----VVKESVDVLNWIICD-------------GDIDPEWIESLNSV 163 >gi|328876862|gb|EGG25225.1| deoxyadenosine kinase [Dictyostelium fasciculatum] Length = 254 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 31/186 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL I G+ G GKTT + L R L + + F Sbjct: 22 GLHIGISGLIGVGKTTLCTALGRVLN-------LPTYYEQVIDNKYLADFYQDPKKYSF- 73 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQH------- 114 ++ R + + +G+ + DR + DS +A Sbjct: 74 PLQIYLLNNRFRQQ------QQIIWQGRGGVQDRTIYEDSVFAKMLMESGLMEKRDYETY 127 Query: 115 -LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +L P+ I LD+ + L+R++ R E + + + Sbjct: 128 CTLFSNLSNFMR---KPNLIIHLDVSPEESLERIKMRDRDCEKTVT----LEYLTNLNRA 180 Query: 174 RQIFLD 179 Q FL Sbjct: 181 YQEFLQ 186 >gi|325568466|ref|ZP_08144833.1| deoxynucleoside kinase [Enterococcus casseliflavus ATCC 12755] gi|325158235|gb|EGC70388.1| deoxynucleoside kinase [Enterococcus casseliflavus ATCC 12755] Length = 220 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 33/237 (13%), Positives = 72/237 (30%), Gaps = 58/237 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ +L+ ++A + V Sbjct: 10 IVLAGTIGAGKSSLTALIANHF-----------------GSQAFYESIDDNEVLPLFYAD 52 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS--------- 112 A + L+ I+ A+ + +L DR + DS + Sbjct: 53 PNKYAFLLQIYFLNKRFESIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVKVY 111 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + L+E+ + + PD + + + + L+R++ R E + + Sbjct: 112 DELLANMLEELPYAAHKKHPDLLVHIRVSFETMLERIEKRGR----------EYEQLTFD 161 Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH-----SFQSVATNILNIVWELVQK 214 + ++ + +D Q+ A +L +V E ++ Sbjct: 162 PSLYDYYKELNKRYDQWYEEYNESPKIQIDGDQFNFVEDPQA-AQAVLTMVEEALKD 217 >gi|313224967|emb|CBY20759.1| unnamed protein product [Oikopleura dioica] Length = 520 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 63/230 (27%) Query: 2 NSGLFISFEGIEGAGK---TTHIS------------------LLKRF------------L 28 + F + EG+ GAGK T+ I+ L+ F L Sbjct: 97 KNAKFFTVEGLPGAGKADFTSGIAAGAGLKDMGKGDLMWELTRLRDFKGENNLYNTWKML 156 Query: 29 QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPAL- 87 + + R E + + SC + + R H + + L Sbjct: 157 IEEGHHYLAMRSVDMQKFYENPKDHVHSCRMQDH--------MKLQRHIHTMDCLYHLLT 208 Query: 88 -MEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISVQE------VMPDCTI 134 +G + +R S Y Y G + + ++ ++ + P + Sbjct: 209 TAQGT--ITNRTYHSDYCYAYAMMKMGYLSKNYYEMRYTVSHAAIDGSGTATDLTPHVSF 266 Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 LD+ + L++++ R + E + + + + + Sbjct: 267 FLDISPEEALEKIKARGNEAEIKTI------TLDFLKHLDEAYRGFWAED 310 >gi|313217866|emb|CBY41264.1| unnamed protein product [Oikopleura dioica] Length = 488 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 68/230 (29%), Gaps = 63/230 (27%) Query: 2 NSGLFISFEGIEGAGK---TTHIS------------------LLKRF------------L 28 + F + EG+ GAGK T+ I+ L+ F L Sbjct: 97 KNAKFFTVEGLPGAGKADFTSGIAAGAGLKDMGKGDLMWELTRLRDFKGENNLYNTWKML 156 Query: 29 QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPAL- 87 + + R E + + SC + + R H + + L Sbjct: 157 IEEGHHYLAMRSVDMQKFYENPKDHVHSCRMQDH--------MKLQRHIHTMDCLYHLLT 208 Query: 88 -MEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISVQE------VMPDCTI 134 +G + +R S Y Y G + + ++ ++ + P + Sbjct: 209 TAQGT--ITNRTYHSDYCYAYAMMKMGYLSKNYYEMRYTVSHAAIDGSGTATDLTPHVSF 266 Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 LD+ + L++++ R + E + + + + + Sbjct: 267 FLDISPEEALEKIKARGNEAEIKTI------TLDFLKHLDEAYRGFWAED 310 >gi|282162678|ref|YP_003355063.1| putative signal recognition particle receptor [Methanocella paludicola SANAE] gi|282154992|dbj|BAI60080.1| putative signal recognition particle receptor [Methanocella paludicola SANAE] Length = 347 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 13/131 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + F G+ G GKTT I+ L L+ N V + G T A A L D G + Sbjct: 154 VVFTGVNGTGKTTTIAKLAERLKESNVGVVIAA--GDTFRAGAIEQ--LQKHADRLGVKM 209 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + + + A K ++ A R + ++ L++I + Sbjct: 210 IKHDQGSDPAAVIYDAVAYAKSNKKDVV--------LADTAGRLHTNVNLMEQLKKI-SR 260 Query: 127 EVMPDCTIILD 137 + PD I +D Sbjct: 261 IIRPDLVIFVD 271 >gi|257058106|ref|YP_003135994.1| guanylate kinase [Cyanothece sp. PCC 8802] gi|256588272|gb|ACU99158.1| guanylate kinase [Cyanothece sp. PCC 8802] Length = 184 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 39/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+SG I G G GK T + L Q + TR P G + + Sbjct: 1 MSSGKLIVLTGPSGVGKGTLVRSLLARHQNLYLSISATTRSPRGGEIDGQDYYFVSVPQF 60 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + + +A + + +G +L + + Sbjct: 61 EEMITQENLLEWANYAGNYYGTPRQKVEEKIDQGITVLL---------------EIELVG 105 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +QE + IL V+ +R++ R + E A ER Sbjct: 106 ARKIQETFPTAIR---IFILPPSVEELERRLRGRGTEAEEAIARRLERAK---------- 152 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++A + +V+ + L + EL+ R Sbjct: 153 -EELAASSEFNYTVVN-----DEL-EKALEALEELIVNR 184 >gi|325857441|ref|ZP_08172496.1| hypothetical protein HMPREF9303_0054 [Prevotella denticola CRIS 18C-A] gi|327314147|ref|YP_004329584.1| hypothetical protein HMPREF9137_1915 [Prevotella denticola F0289] gi|325483151|gb|EGC86131.1| hypothetical protein HMPREF9303_0054 [Prevotella denticola CRIS 18C-A] gi|326945080|gb|AEA20965.1| conserved hypothetical protein [Prevotella denticola F0289] Length = 357 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 9/108 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V + E + ++ + Sbjct: 1 MKR---IVLTGGPCAGKTTALVKVIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNHAFF 57 Query: 61 EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A E + R + I+ I++CDR AY Sbjct: 58 YEGEKATLETQLDLEDRFTRMAETIK----TPTIIVCDRGTMDISAYM 101 >gi|302795141|ref|XP_002979334.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii] gi|300153102|gb|EFJ19742.1| hypothetical protein SELMODRAFT_418976 [Selaginella moellendorffii] Length = 459 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 15/39 (38%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 G I EG++ +GK++ L + V R Sbjct: 227 KRGTLIVLEGLDRSGKSSQCHWLMEMKLMAGITLVVDRY 265 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 30/123 (24%) Query: 80 ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP 139 ++ LM G L+ DR+ S A+ + L L+ + + V D Sbjct: 247 HWLMEMKLMAGITLVVDRYSYSGVAFSAAKG----LDLEWCKALGVGLPAADLV------ 296 Query: 140 VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQS 199 R + + + RK + K C VD+ SF Sbjct: 297 ------RQRKLLCAVDMEMSSWIFRKKLPYSTKV--------------CRFVDARQSFDQ 336 Query: 200 VAT 202 V Sbjct: 337 VHE 339 >gi|313125688|ref|YP_004035958.1| adenylate kinase [Halogeometricum borinquense DSM 11551] gi|312292053|gb|ADQ66513.1| Adenylate kinase [Halogeometricum borinquense DSM 11551] Length = 213 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 33/239 (13%), Positives = 67/239 (28%), Gaps = 58/239 (24%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGV 59 G I G GAGK T L + + T +A R + Sbjct: 2 GKHILLLGAPGAGKGTQSKRLASEF---DLEHVTT--------GDALRANKDMDISDMDF 50 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + D V +++ AL E D ++ Y R+ Q +L Sbjct: 51 EYDTPREYMESGDLVPDDVVNEIVKTALQE-----ADGYVLDGY----PRNIEQAEYLTE 101 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---------------- 163 + ++ D + LD+ + ++R+ R + + E Sbjct: 102 ITDL-------DAVLYLDVSEEELVERLTGRRVCDDCGANYHVEFAPPEEDGVCDDCGGE 154 Query: 164 --RKDVMIHEKRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +++ E R+ + +D + V ++ +V + Sbjct: 155 LIQREDDTEETVRERLTVYHKNTEPVVNHYRDEGVLVEIDGEQTPDGVFDDVAEVVEDA 213 >gi|153955460|ref|YP_001396225.1| hypothetical protein CKL_2842 [Clostridium kluyveri DSM 555] gi|219855872|ref|YP_002472994.1| hypothetical protein CKR_2529 [Clostridium kluyveri NBRC 12016] gi|146348318|gb|EDK34854.1| Gmk [Clostridium kluyveri DSM 555] gi|219569596|dbj|BAH07580.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 185 Score = 45.0 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 41/201 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+GK+T + L+++ Y+ TR+P E + + Sbjct: 12 GSGKST----ITELLEKEGYNYIQSYTTRKP--RFEGEKGHIFIGDSNIAYINGTI---- 61 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS---SQHLFLDSLQEISVQE 127 ++ + +VI G + + YQG+ S + L+E Sbjct: 62 ---SKNELTSDVIAYTFFNGNH-----YWATKEQYQGKGISVYIIDPSGVKYLKEKVTDA 113 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 I L ++ L R+ A D + R++F I + Sbjct: 114 ET--VVIYLKCDKEVRLLRMLK--ERDPKAVRDRL--------KNDREVFKIIQCDY--- 158 Query: 188 CHIVDSAHSFQSVATNILNIV 208 +VDS + + ++ +I+ Sbjct: 159 --VVDSNRKVEEILEDVKSII 177 >gi|329120050|ref|ZP_08248720.1| deoxynucleoside kinase [Neisseria bacilliformis ATCC BAA-1200] gi|327463581|gb|EGF09899.1| deoxynucleoside kinase [Neisseria bacilliformis ATCC BAA-1200] Length = 222 Score = 45.0 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 56/178 (31%), Gaps = 23/178 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G+GK+ L + ++T P P E L G Sbjct: 11 RYIVVEGAIGSGKSELARRLAGYFDAL----YLTESPETNPFLE-----LFYQNAANHGL 61 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQH----LFL 117 E F R + ++I + ++ D FL D + D+ LF Sbjct: 62 ATELH-FLLRRAKAI-DIINAEEAKNGRVVAD-FLLEKDKIFVPVVLDDNENANEQTLFW 118 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHE 171 ++ +I + +PD I L KR++ R + L + Sbjct: 119 EAKHKIMPEMPVPDLVIYLQTGGAAAEKRLRARGEGMPNLFPEGYLGRINEEYRRFFH 176 >gi|61200779|gb|AAX39814.1| thymidine kinase [Epizootic haematopoietic necrosis virus] gi|225734440|gb|ACO25208.1| deoxynucleoside kinase [Epizootic haematopoietic necrosis virus] Length = 195 Score = 45.0 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G GAGK+T + L+ Y+V + + L +F ++ Sbjct: 7 IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAY------QGERDSSQHLFLDS 119 + ++ + + R A ++++ +R + + QG+ ++H L Sbjct: 60 KIMLTQS-------EIQRDAKKSDSRVVVLERTTECVLDFCDVAMEQGQILPAEHDMLVQ 112 Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E +P D I L+ P + ++R+ R E V F Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAVRGREFERDIP-------VEYLSSLHSKF- 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PD S ++V N + ++ +V + V Sbjct: 162 ---ARDPDYIM--SGLESKEAVLANAIELIERIVSRNV 194 >gi|196044663|ref|ZP_03111898.1| conserved hypothetical protein [Bacillus cereus 03BB108] gi|196024698|gb|EDX63370.1| conserved hypothetical protein [Bacillus cereus 03BB108] Length = 192 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 5 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 54 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151 >gi|229185888|ref|ZP_04313061.1| hypothetical protein bcere0004_34360 [Bacillus cereus BGSC 6E1] gi|228597600|gb|EEK55247.1| hypothetical protein bcere0004_34360 [Bacillus cereus BGSC 6E1] Length = 195 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 8 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 57 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154 >gi|105672147|gb|ABF74689.1| AAA [Gonyaulax polyedra] Length = 656 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%) Query: 11 GIEGAGKTTHISLLKRFL-QRKNYDVHVT-REPGGT-----PAAEAARHVLLSCGVDEFG 63 G G+GKTT + R L + ++ V T RE GG + AR +L+ Sbjct: 452 GPTGSGKTTVTRDVARLLAEERSVMVVDTARELGGAGVVAHSSLGLARRLLVDSAEQHLA 511 Query: 64 AEAEAIVFAAA 74 A EAI+ AA Sbjct: 512 AVEEAILSHAA 522 >gi|46518741|gb|AAS10182.1| flagellar adenylate kinase [Chlamydomonas reinhardtii] Length = 658 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 71/221 (32%), Gaps = 55/221 (24%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K +YD A + R + S E G + Sbjct: 472 IVFVLGGPGSGKGTQCDKIKA-----DYDCVHLS------AGDLLRAEVKSGS--EVGQK 518 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 519 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 558 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD ++ +MP T + D P + KR+ R R D ++ ++ Sbjct: 559 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLDQS 617 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +L +CH++ + + V + + L Sbjct: 618 LPVKDHYLTQ-----GKCHVISAVAAPDDVYGKVKVALEGL 653 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 72/221 (32%), Gaps = 55/221 (24%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K +Y+ A + R + S E G + Sbjct: 63 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGLK 109 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 110 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 149 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD ++ +MP T + D P + KR+ R R D ++ ++ Sbjct: 150 LDQAEQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFHTFLDQS 208 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +L +CH++ + + V + ++ L Sbjct: 209 LPVKDHYLTQ-----GKCHVISAVAAPDDVYGKVKVVLEGL 244 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 67/210 (31%), Gaps = 55/210 (26%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK T +K +Y+ A + R + S E G + Sbjct: 282 IVFVLGGPGSGKGTQCDKIKA-----DYECVHLS------AGDLLRAEVKSGS--EVGQK 328 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLF-- 116 EA++ EGK++ L R A G+ Sbjct: 329 CEALM-----------------KEGKLVPVAVTLNLLKR---DMIASGGKFFLIDGFPRA 368 Query: 117 LDSLQEISVQEVMPDCT-IILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD + +MP T + D P + KR+ R R D ++ ++ Sbjct: 369 LDQAAQFES-SIMPCKTVLFFDCPEEEMEKRLLKRGETSGRSDDNADTIRKRFRTFLDQS 427 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + +L +CH++ + + V Sbjct: 428 LPVKDHYLTQ-----GKCHVISAVAAPDDV 452 >gi|47567940|ref|ZP_00238647.1| hypothetical protein ATP-binding protein [Bacillus cereus G9241] gi|47555418|gb|EAL13762.1| hypothetical protein ATP-binding protein [Bacillus cereus G9241] Length = 192 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 67/197 (34%), Gaps = 36/197 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT + L+RK + V P P E + + L E Sbjct: 5 ISLQGPMASGKTTL----AKRLERKGFSVIY-ENP--YPIVEKRKRLKLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118 F A + +E I+ +G +++ DR + G+ + D Sbjct: 54 ----FIANQKMFIEAKIKDFQNAKGSVVIFDRGPEDIEFYTLFYPMVIGKEWDIEIELKD 109 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L ++ +E D LD+ R N R + E+ ++ EK Sbjct: 110 ELYKL--RECRSDAIFYLDVSESNLYDRKNN---DRTRNRSTFEEQFKLVETEK------ 158 Query: 179 DIARNQPDRCHIVDSAH 195 D + P VD+ Sbjct: 159 DWYKQFPVTY--VDANR 173 >gi|291569159|dbj|BAI91431.1| shikimate kinase [Arthrospira platensis NIES-39] Length = 184 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 40/201 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T +L L Y T + +A + + G +EF ++ + Sbjct: 18 GAGKSTVGEILANRLS---YKFFDTDVLISQVSGQAIPEIFSTQGEEEFRNLESQVLSSL 74 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 H+ + G ++ R S + Sbjct: 75 CAYQHLV------VATGGGVVIKRMNWSYLRHG-------------------------II 103 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 + LD+P +R++ + D R D I E RR ++ Q D ++ Sbjct: 104 VWLDVPTHCLYERLKGDTTRPLLQHPDPLTRLD-NILETRRHLY-----QQADISITING 157 Query: 194 AHSFQSVATNILNIVWELVQK 214 +A I+ + ++++ Sbjct: 158 NEKPSEIAEQIITKIPNILKQ 178 >gi|42412400|gb|AAS15577.1| cytoplasmic dynein heavy chain 2 [Mus musculus] Length = 607 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 30/125 (24%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL G Sbjct: 76 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLL--GHI 126 Query: 61 EFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + ++ +AR V+R ++CD +++ Sbjct: 127 DMDTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIE 168 Query: 119 SLQEI 123 SL + Sbjct: 169 SLNSV 173 >gi|26350549|dbj|BAC38914.1| unnamed protein product [Mus musculus] Length = 927 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 30/125 (24%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL G Sbjct: 66 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLL--GHI 116 Query: 61 EFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + ++ +AR V+R ++CD +++ Sbjct: 117 DMDTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIE 158 Query: 119 SLQEI 123 SL + Sbjct: 159 SLNSV 163 >gi|116494699|ref|YP_806433.1| deoxynucleoside kinase [Lactobacillus casei ATCC 334] gi|191638197|ref|YP_001987363.1| Deoxyguanosine kinase [Lactobacillus casei BL23] gi|227535316|ref|ZP_03965365.1| possible deoxyguanosine kinase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239631699|ref|ZP_04674730.1| deoxynucleoside kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066259|ref|YP_003788282.1| deoxynucleoside kinase [Lactobacillus casei str. Zhang] gi|116104849|gb|ABJ69991.1| Deoxynucleoside kinase [Lactobacillus casei ATCC 334] gi|190712499|emb|CAQ66505.1| Deoxyguanosine kinase [Lactobacillus casei BL23] gi|227187050|gb|EEI67117.1| possible deoxyguanosine kinase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526164|gb|EEQ65165.1| deoxynucleoside kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438666|gb|ADK18432.1| Deoxynucleoside kinase [Lactobacillus casei str. Zhang] gi|327382229|gb|AEA53705.1| Deoxynucleoside kinase subfamily, putative [Lactobacillus casei LC2W] gi|327385426|gb|AEA56900.1| Deoxynucleoside kinase subfamily, putative [Lactobacillus casei BD-II] Length = 242 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 42/233 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV--- 70 GAGKT+ +L +Q + G A + E A++ Sbjct: 9 GAGKTSLTKVLSEDMQA---PAYYEDVEGNGMIANMLQKFY--GAGVESRKRTGAMLQIA 63 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLDSLQEIS 124 F R ++ + + D L+S + GE D +L + Sbjct: 64 FLTFRYQQLKKAVTQENA-----IMDSSLESDFVMASQLHKHGEIDDVDFNVYVTLSQEM 118 Query: 125 VQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-KDVMIHEKRRQI 176 V PD + L + D + +Q+R E D E+ + V + + Sbjct: 119 QSNVNGSPWNGFPDLAVYLKIDPDHEIDEIQSRGRDME----DIREKPELVDYYRRVNTA 174 Query: 177 FLDIARNQ-PDRCHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220 + D A+ +D SA SV I + +L ++SP + Sbjct: 175 YRDWAKGYTRSSMITIDRDRYDFMHSAADRASVLDQIETKLVDL--GKLSPQA 225 >gi|311259358|ref|XP_003128059.1| PREDICTED: UMP-CMP kinase-like [Sus scrofa] Length = 216 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 60/212 (28%), Gaps = 57/212 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFLDSLQ 121 +I + +GKI+ L R +D + A Q + + Sbjct: 80 -------QYGELIEKYIKDGKIVPVEITISLLRREMDQTMAANAQKNKFLIDGFPRNQDN 132 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + M D DI ++R R + + + + EKR Q +L Sbjct: 133 LQGWNKTM-------DGKADICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQST 179 Query: 182 R------NQPDRCHIVDSAHSFQSVATNILNI 207 + + + +D++ S V ++ I Sbjct: 180 KPIIDLYEEMGKVKKIDASKSVDEVFDEVVKI 211 >gi|150020007|ref|YP_001305361.1| guanylate kinase [Thermosipho melanesiensis BI429] gi|149792528|gb|ABR29976.1| Guanylate kinase [Thermosipho melanesiensis BI429] Length = 204 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 26/172 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G G GKT+ I+ L L R + V TR P + + Sbjct: 3 GTLIVVSGPSGVGKTSIINALLNKLDRIVFSVSCTTRPPRPGEINGVDYFFISKEEFKKM 62 Query: 63 GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + +A + + + + +G ++ D +D A Q +++ S Sbjct: 63 RENGEFLEWAQVHGNLYGTPKKFVVENIKKGNRIILD--IDVQGALQVKKNFS------- 113 Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 D + P + R+ R + E L FE + Sbjct: 114 -----------DAVFVFVAPPSYKVLRDRLLKRGTESEEIMLKRFENAKWEM 154 >gi|308321220|gb|ADO27762.1| gpn-loop GTPase 1 [Ictalurus furcatus] Length = 398 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 12/102 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVL 54 I G+ G+GKTT + L +L K VH P + + V+ Sbjct: 45 LIVL-GMAGSGKTTFVQRLTAYLHSKKSPPYVINLDPAVHEVPFPANIDIRDTVNYKEVM 103 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G+ G ++ A R D V I + +L D Sbjct: 104 KQYGLGPNGGIVTSLNLFATRFDQVMKFIEKKQQNHQYVLID 145 >gi|283956711|ref|ZP_06374189.1| hypothetical protein C1336_000270011 [Campylobacter jejuni subsp. jejuni 1336] gi|283791788|gb|EFC30579.1| hypothetical protein C1336_000270011 [Campylobacter jejuni subsp. jejuni 1336] Length = 165 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 31/144 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG+ + G+ G+GKTT L++ L +N + + R + + D Sbjct: 2 SGVLVYITGLSGSGKTTLAKELQKELILQNIYPILL-------DGDELRACINNANYDIK 54 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A+ + + + +G I++ S+ + DS++E Sbjct: 55 NRMEMAMFYV--------KIAKMLYNQGFIVIL-----STIS-----------MFDSIRE 90 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146 + I LD+ +I KR Sbjct: 91 FNRNSFQNYLEIFLDVSFEIRKKR 114 >gi|218663465|ref|ZP_03519395.1| hypothetical protein RetlI_31333 [Rhizobium etli IE4771] Length = 169 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 47/204 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64 EG G GKT+ + L+R+ + V V G T EA L Sbjct: 8 IEGSSGTGKTS----VATELERRGFHVVHGDRVLAYVGDTETGEA-----LEGPPQGVD- 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + H + I P + + + + D +++ G R+ + L + Sbjct: 58 ---------RVVWHYAHWIWP-VEKVRAITADTTHPATFFCGGSRNFRKFLDVF------ 101 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 D +LD+ V+ +R+ R A + + +++ Sbjct: 102 ------DKVFVLDIDVETLNRRLDGRPDEPGFAPDER----------AVVLQYHRSSKHF 145 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 P +D+ + SV +IL + Sbjct: 146 PAGIG-IDTTGTVPSVVDDILAQL 168 >gi|308163350|gb|EFO65693.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative [Giardia lamblia P15] Length = 215 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 19/151 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG AGK+T S L T P E L ++G + Sbjct: 9 FI-LEGNIAAGKSTLASKLADMY---GLT-LFTEPVEENPYLE-----LFYEDPKKWGYQ 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS- 124 + F RL+ + I+ + +L DR + S + + + + Sbjct: 59 MQIWFFN-QRLNTYKEAIQASKTAKG-VLLDRSVFSDLVFALNSYEDGFISDADFKLYNE 116 Query: 125 ------VQEVMPDCTIILDLPVDIGLKRVQN 149 +P + LD + R+ N Sbjct: 117 QYQSKLKDLPLPTVILYLDATPETCYYRIHN 147 >gi|323340925|ref|ZP_08081174.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644] gi|323091587|gb|EFZ34210.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644] Length = 264 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 75/238 (31%), Gaps = 35/238 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGV 59 I+ GI G+GK++ +L + L K Y + + G A R Sbjct: 18 LITLSGIIGSGKSSLTEILSKELGTKAYYEPVEDNPVLPIFYKGNEIAAKKRAA---GEK 74 Query: 60 DEFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQGERDSS 112 D A + + R + I+ A+ +L DR + A G Sbjct: 75 DATNPYAYLLQTYFLNRRFAM---IKEAMKNDNNIL-DRSIYEDEIFMKMNAEMGNATKV 130 Query: 113 QHLFLDSLQE-------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 ++ SL + + PD I + + + +KR+ R E D Sbjct: 131 EYDIYKSLLNNMMEELPYAAHKKSPDLMITIKVSYETMIKRIIKRGRDYEQIEKDP---S 187 Query: 166 DVMIHEKRRQIFLDIARNQPDR-CHIVDSAHS--FQSVATNILNIVWELVQKRVSPLS 220 V + + + D + I+D V + + E ++ ++ L Sbjct: 188 LVDYYHRLLGHYDDWMDEYDESPLLIIDGDKYDFVADVKDRVK--ILETIEDKLYDLG 243 >gi|255082011|ref|XP_002508224.1| cytoplasmic dynein heavy chain 1b [Micromonas sp. RCC299] gi|226523500|gb|ACO69482.1| cytoplasmic dynein heavy chain 1b [Micromonas sp. RCC299] Length = 4261 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 24/120 (20%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ I G G+GK++ +L+ ++ V R LL G + Sbjct: 1984 GIIIV--GPSGSGKSSLWHILEGAYKKLGRPVKRYVMNPKAIH----RQQLL--GHMDMD 2035 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 F D V++ +L + ++CD +++SL + Sbjct: 2036 TREW---FDGVLTDSARQVVKESLDQHSWIICD-------------GDVDPEWIESLNSV 2079 >gi|326922319|ref|XP_003207397.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like [Meleagris gallopavo] Length = 378 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSS 112 D +A +F R+ + + L G+ ++ +R S + + QG Sbjct: 147 PDGHSYRLQAWLF-GNRVLQYSDALEHLLTTGQGVVMERSPYSDFVFLDAMFKQGYIHKR 205 Query: 113 QHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 ++EI + + + P I LD+PV KR+Q + E Sbjct: 206 CVDHYKEIKEIGICEFLPPHLVIYLDVPVPDVQKRLQEKGEPYEK 250 >gi|259500735|ref|ZP_05743637.1| deoxyguanosine kinase [Lactobacillus iners DSM 13335] gi|302190812|ref|ZP_07267066.1| deoxyguanosine kinase [Lactobacillus iners AB-1] gi|309804052|ref|ZP_07698133.1| deoxyguanosine kinase [Lactobacillus iners LactinV 11V1-d] gi|309806090|ref|ZP_07700111.1| deoxyguanosine kinase [Lactobacillus iners LactinV 03V1-b] gi|309809713|ref|ZP_07703567.1| deoxyguanosine kinase [Lactobacillus iners SPIN 2503V10-D] gi|312872664|ref|ZP_07732729.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2062A-h1] gi|312874844|ref|ZP_07734863.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2053A-b] gi|325912251|ref|ZP_08174648.1| deoxyguanosine kinase [Lactobacillus iners UPII 143-D] gi|259167429|gb|EEW51924.1| deoxyguanosine kinase [Lactobacillus iners DSM 13335] gi|308163820|gb|EFO66086.1| deoxyguanosine kinase [Lactobacillus iners LactinV 11V1-d] gi|308167531|gb|EFO69689.1| deoxyguanosine kinase [Lactobacillus iners LactinV 03V1-b] gi|308169892|gb|EFO71931.1| deoxyguanosine kinase [Lactobacillus iners SPIN 2503V10-D] gi|311089589|gb|EFQ48014.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2053A-b] gi|311091706|gb|EFQ50085.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2062A-h1] gi|325475910|gb|EGC79079.1| deoxyguanosine kinase [Lactobacillus iners UPII 143-D] Length = 221 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 45/229 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L ++L P + Sbjct: 4 IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123 A + L+ I+ AL +L DR + + +Q D + + + E+ Sbjct: 50 YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108 Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173 ++ + PD I + + + +KR+Q R E D E +++ Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYDPTLE----DYYKRL 164 Query: 174 RQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + P ++D V I+ + E+ Sbjct: 165 LTYYKPWYDQYNYSPK--MVIDGDKYDFMNSADDCDKVLKMIVAKLKEV 211 >gi|189501718|ref|YP_001957435.1| hypothetical protein Aasi_0266 [Candidatus Amoebophilus asiaticus 5a2] gi|189497159|gb|ACE05706.1| hypothetical protein Aasi_0266 [Candidatus Amoebophilus asiaticus 5a2] Length = 193 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 78/221 (35%), Gaps = 50/221 (22%) Query: 7 ISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDEFG 63 I G GAGK T + ++ ++ RE T +L + + Sbjct: 4 IVLLGPPGAGKGTQSERIVSQYNLTPIVPGNLMREHINQDTSVG----RLLSNYINEGML 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A + ++ D VE ++ A G L D F R +Q + LD L + Sbjct: 60 APHKVVM------DLVEEQVK-AQKHGFKFLFDGF---------PRAIAQAISLDEL--L 101 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY----------SLRESACLDYFERKDV---MIH 170 D I LD+P +I +R+++R + + L+ + + + + Sbjct: 102 PKHGHQLDAVIFLDVPDEIVKERIRDRAKVSGRVDDQSDEKIATRLEIYHSETLPVVDYY 161 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 EK+ +++ V+ + V I+ ++ L Sbjct: 162 EKQNKLY------------RVEGMGPVEDVFERIIQVINPL 190 >gi|148284194|ref|YP_001248284.1| adenylate kinase [Orientia tsutsugamushi str. Boryong] gi|166219991|sp|A5CCJ2|KAD_ORITB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|146739633|emb|CAM79422.1| Adenylate kinase [Orientia tsutsugamushi str. Boryong] Length = 210 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 61/234 (26%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 + + F G G+GK T SLL + V T T A+ + + S + Sbjct: 1 MILVFIGPPGSGKGTQASLLSEKFSIISVGKVLRTVMESNTAEADVVKKFIKSGKLVP-S 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 IV A + + K ++ D + RD Q FL ++ Sbjct: 60 NITNKIVVNA----------LKNIEQCKSIILDGY---------PRDIFQADFLQENLQM 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------------KDVMI 169 + + D+ + L+R++ R S + + + + Sbjct: 101 DFK------VLFFDIDDAVVLRRLRGRISCTDCGTI--YNKLYCMPKINGVCDICNSSSF 152 Query: 170 HEKR---------R-QIF-------LDIARNQPDRCHIVDSAHSFQSVATNILN 206 + R + + L+ + Q ++ ++D+ S +++ I Sbjct: 153 QNRVDDDESIIKLRLESYKKETLPLLEFYKAQ-NKLTLIDANQSTENILKKIKK 205 >gi|94265267|ref|ZP_01289026.1| Guanylate kinase [delta proteobacterium MLMS-1] gi|93454248|gb|EAT04564.1| Guanylate kinase [delta proteobacterium MLMS-1] Length = 210 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 66/233 (28%), Gaps = 47/233 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G GAGKTT + + R + + H TR P H + Sbjct: 1 MSRGCLFVVSAPSGAGKTTLLKKILATTPRAGFSISHTTRPPRAGEQDGVDYHFVDRDTF 60 Query: 60 DEFGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 D + + + +R I AL G+ + D QG R Sbjct: 61 DRMRRRGDFLEAAEVHGNFYGTSRAA-----IEAALARGEDIFLD------IDVQGARQI 109 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMI 169 + + + P + +R++ R + E+ E + Sbjct: 110 RDLAEIAA-------------VFLFIAPPSAAILEQRLRGRDTDDEATIALRLENARREM 156 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 E + + N R + + I IV E ++R P Sbjct: 157 EEA--AWYDYLVINDKLR--------QAEELLAAI--IVAERCRRRRWPDGEP 197 >gi|261346230|ref|ZP_05973874.1| shikimate kinase [Providencia rustigianii DSM 4541] gi|282565538|gb|EFB71073.1| shikimate kinase [Providencia rustigianii DSM 4541] Length = 165 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 49/208 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F G G+GKTT L + Y T + A + ++ G D F Sbjct: 1 MFYII-GPRGSGKTTIGKRLAE---KTGYQFIDTDKCIVEQAGMSIAEIVELQGWDYFR- 55 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 H+E+ + ++ ++ + + L + Sbjct: 56 -------------HLESDVLKSIQSQDAIVS---------------TGGGIILAPENQQV 87 Query: 125 VQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKRRQIFLD 179 ++ D I L +I KR+ + L E + + E+R I+L Sbjct: 88 MR----DNGVVIYLHSTPEILAKRLAAEPQAEQRPSLTGKSLLE-EIAEVMEQRDPIYLS 142 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNI 207 A H++D+ S ++ + I N+ Sbjct: 143 TAH------HVIDANQSIDAIISQIANL 164 >gi|254167206|ref|ZP_04874059.1| signal recognition particle-docking protein FtsY [Aciduliprofundum boonei T469] gi|197624062|gb|EDY36624.1| signal recognition particle-docking protein FtsY [Aciduliprofundum boonei T469] Length = 307 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L ++L+ K Y V + G T A A + + D G + Sbjct: 114 IMFLGVNGTGKTTVIAKLAKYLKDKGYSVVMAA--GDTFRAGAIEQISIHG--DNLGIKV 169 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + I A + +L D + + + ++ ++ Sbjct: 170 IKHQAGGDPAAVCYDAIEHAKAKHRDFVLID-----TAGRMQTNRNL-MEEMKKIKRVA- 222 Query: 126 QEVMPDCTII 135 P TI Sbjct: 223 ---KPHLTIF 229 >gi|61200784|gb|AAX39815.1| thymidine kinase [Wamena iridovirus] Length = 195 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 77/218 (35%), Gaps = 38/218 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G GAGK+T + L+ Y+V + + L +F ++ Sbjct: 7 IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFL-----DSSYAY-QGERDSSQHLFLDS 119 + ++ + + R A ++++ +R + A QG+ ++H L Sbjct: 60 KIMLTQS-------EIQRDAKKSDRRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLVQ 112 Query: 120 LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E +P D I L+ P + ++R+ R E V F Sbjct: 113 IWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF- 161 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PD S + V N + ++ ++V + V Sbjct: 162 ---ARDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194 >gi|49237383|ref|YP_031664.1| putative deoxynucleoside kinase [Frog virus 3] gi|47060201|gb|AAT09745.1| putative deoxynucleoside kinase [Frog virus 3] gi|61200789|gb|AAX39816.1| thymidine kinase [Frog virus 3] Length = 195 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 80/219 (36%), Gaps = 40/219 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+F G GAGK+T + L+ Y+V + + L +F ++ Sbjct: 7 IAFSGNIGAGKSTLLRG----LEAAGYEVV---PEDFSRWGQLFEMALEDPNRWKFSSQL 59 Query: 67 EAIVFAAARLDHVENVIRPALME--GKILLCDRFL-----DSSYAY-QGERDSSQHLFLD 118 + ++ +++ I+ A + ++++ +R + A QG+ ++H L Sbjct: 60 KIML--------IQSEIQRAAKKSDNRVVVLERTTECVLDFCNVAMEQGQILPAEHDMLV 111 Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + E +P D I L+ P + ++R+ R E V F Sbjct: 112 QIWEKVN---VPVDAKIFLNTPPEKCMERIAFRGRAFERDIP-------VEYLSSLHSKF 161 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 PD S + V N + ++ ++V + V Sbjct: 162 ----TRDPDYIM--SGLESKEVVLANAIELIEKIVSRNV 194 >gi|119776498|ref|YP_929238.1| DamX domain-containing protein [Shewanella amazonensis SB2B] gi|119768998|gb|ABM01569.1| DamX domain protein [Shewanella amazonensis SB2B] Length = 512 Score = 44.6 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + +GIEGAGK+T ++ L L+ N + V P AAE R +L+ D + Sbjct: 30 LVVIQGIEGAGKSTLLTALVSELEDYNSALVVC--PMHADAAEIRRKILIQLLADPLFDD 87 Query: 66 AEAI 69 E + Sbjct: 88 EEPL 91 >gi|301785802|ref|XP_002928318.1| PREDICTED: UMP-CMP kinase-like [Ailuropoda melanoleuca] Length = 192 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 26/150 (17%) Query: 78 HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125 +I + +GKI+ L R D + A Q + D+LQ Sbjct: 44 QYGELIEKYIKDGKIVPVEITISLLKREKDQTMAANAQMNKFLIDGFLRNKDNLQGWKKT 103 Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182 + D + D +I ++R R + + + + EKR Q +L + Sbjct: 104 MDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKP 157 Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207 + + +D++ S V ++ I Sbjct: 158 IIDLYEEMGKVKKIDASKSVDEVFDEVVKI 187 >gi|269219024|ref|ZP_06162878.1| uridine kinase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212135|gb|EEZ78475.1| uridine kinase [Actinomyces sp. oral taxon 848 str. F0332] Length = 208 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 29/190 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G G+GKTT L K+ V A R +L D F + Sbjct: 15 GGTGSGKTTLTRKLVERFPGKSSVVFHDSYYKAHDDLAYEERCLLNYDHPDAFDNDL--- 71 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 ++H+ L G+ + C + SSY + + I V+ ++ Sbjct: 72 -----MVEHLRR-----LAAGRPVECPVYDYSSYNRSDRTRRIEPAPI-----IVVEGIL 116 Query: 130 ----P------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 P D + +D D+ + R R + L+ ER+ + + +++++ Sbjct: 117 IYAAPEICELLDIKVFVDTDADVRILRRIKRDVVERGRTLESVERQYLTTVKPMHELYVE 176 Query: 180 IARNQPDRCH 189 ++ D Sbjct: 177 PSKRNADIIV 186 >gi|228992342|ref|ZP_04152273.1| hypothetical protein bpmyx0001_30840 [Bacillus pseudomycoides DSM 12442] gi|228767367|gb|EEM15999.1| hypothetical protein bpmyx0001_30840 [Bacillus pseudomycoides DSM 12442] Length = 182 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 25/157 (15%) Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74 +GKTT L R L++ + + P G E +++ L E F Sbjct: 3 SGKTT----LARRLKKHGFPILY-ENPYG--IVEKRKNLNLDIYTKEG--------FITN 47 Query: 75 RLDHVENVIRPA-LMEGKILLCDRFLDS---SYAYQGERDSSQHLFLDSLQE--ISVQEV 128 + +E I+ G+I++ DR + Y + + L++ ++ Sbjct: 48 QRMFIEAKIKEIQNARGRIVIFDRGSEDIEFYTIYFPKLIGMDWDIENELKDELYKLRRC 107 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 D LD+ I +R +N + R S FE++ Sbjct: 108 RSDAIFYLDVSKKILQERKKNDNTRRRST----FEKQ 140 >gi|91205856|ref|YP_538211.1| adenylate kinase [Rickettsia bellii RML369-C] gi|122425380|sp|Q1RHP2|KAD_RICBR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|91069400|gb|ABE05122.1| Adenylate kinase [Rickettsia bellii RML369-C] Length = 212 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 35/237 (14%), Positives = 80/237 (33%), Gaps = 59/237 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL--SCGVDEF 62 + I F G GAGK T + + +H+ + R ++ S + Sbjct: 1 MIIIFLGPPGAGKGTQGKKIAK-------KIHLP----HIAIGDIFRAIIKTSSKDAEVI 49 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + E + V ++I+ L D Y G + + + Sbjct: 50 NSYVEQGKLIPD--EIVNHIIKNFLSS-----SD--YKKGYILDGYPRNLEQA--KFFES 98 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYF------------------ 162 +++ I L++ ++ +KR+ RYS + + DYF Sbjct: 99 FVTEKIK---VIYLNVSDELLIKRILGRYSCKSCGKIYNDYFLKPRIDKICDVCKSSVFE 155 Query: 163 ----ERKDVMIHEKRRQIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209 + ++V I E+ IF + ++ + +++D + + + +I ++ Sbjct: 156 YRKDDNEEV-IKERI-NIFKTETYPLIQHYKNNDDFYMIDGNKNEEQIEDHIEKVLK 210 >gi|78062089|ref|YP_371997.1| hypothetical protein Bcep18194_B1239 [Burkholderia sp. 383] gi|77969974|gb|ABB11353.1| hypothetical protein Bcep18194_B1239 [Burkholderia sp. 383] Length = 274 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + EGI G+GK+T + ++ + L +D E A L + + Sbjct: 40 RLVIVEGIMGSGKSTAMRVIAKHLTAAGHDAVAIHERTDPHPVRATDE--LEHWFEPWRD 97 Query: 65 EAEAIVFAAARL 76 A + A R Sbjct: 98 ATAAHL--AGRA 107 >gi|228927612|ref|ZP_04090664.1| uridine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228832092|gb|EEM77677.1| uridine kinase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 198 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 13 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 53 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + ++ E V+ P + + + L+ D S+ Y Sbjct: 54 FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 103 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 104 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 152 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 153 ARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 191 >gi|226505606|ref|NP_001148719.1| LOC100282335 [Zea mays] gi|194698310|gb|ACF83239.1| unknown [Zea mays] gi|195621636|gb|ACG32648.1| uridylate kinase [Zea mays] Length = 212 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 62/216 (28%), Gaps = 63/216 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 32 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71 Query: 71 FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114 +I + EGKI+ D+FL + R+ Sbjct: 72 ----------TMIENMIKEGKIVPSEVTIKLLQEAMIKNENDKFLIDGF----PRNEENR 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 +++ +IS P + D KR+ R R ++ +++ E Sbjct: 118 AAFENVTKIS-----PAFVLFFDCSEKEMEKRLLGRNQGRVDDNIETIKKRFKTFVESSL 172 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + D+ +D+A V ++ I Sbjct: 173 PVIEHYNSR-----DKVKKIDAAKPIPEVFEDVKTI 203 >gi|118478892|ref|YP_896043.1| hypothetical protein BALH_3291 [Bacillus thuringiensis str. Al Hakam] gi|118418117|gb|ABK86536.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 217 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 30 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 78 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 79 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 134 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + SA + F Sbjct: 135 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSAFEEQF 176 >gi|254167609|ref|ZP_04874460.1| signal recognition particle-docking protein FtsY [Aciduliprofundum boonei T469] gi|289596933|ref|YP_003483629.1| signal recognition particle-docking protein FtsY [Aciduliprofundum boonei T469] gi|197623418|gb|EDY35982.1| signal recognition particle-docking protein FtsY [Aciduliprofundum boonei T469] gi|289534720|gb|ADD09067.1| signal recognition particle-docking protein FtsY [Aciduliprofundum boonei T469] Length = 307 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L ++L+ K Y V + G T A A + + D G + Sbjct: 114 IMFLGVNGTGKTTVIAKLAKYLKDKGYSVVMAA--GDTFRAGAIEQISIHG--DNLGIKV 169 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + I A + +L D + + + ++ ++ Sbjct: 170 IKHQAGGDPAAVCYDAIEHAKAKHRDFVLID-----TAGRMQTNRNL-MEEMKKIKRVA- 222 Query: 126 QEVMPDCTII 135 P TI Sbjct: 223 ---KPHLTIF 229 >gi|193214182|ref|YP_001995381.1| deoxynucleoside kinase [Chloroherpeton thalassium ATCC 35110] gi|193087659|gb|ACF12934.1| deoxynucleoside kinase [Chloroherpeton thalassium ATCC 35110] Length = 216 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 59/193 (30%), Gaps = 19/193 (9%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I+ EG+ G GKT+ L + + + A + A Sbjct: 9 KYIAIEGVIGVGKTSLAKKLSEKC---GHRLLLEEFEENPFLA----SFYQNPQCFALPA 61 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + F R + +L + + D + + + + L S Sbjct: 62 Q---LFFLLRRYKQQHQISEISLAANGL-ISDYSFQKNDIFAKTTLNKEEFSLYSAYAEI 117 Query: 125 VQE--VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +Q PD + L + +K + R E + +K +H + F A Sbjct: 118 LQANIPKPDLVVYLQSTPERLIKNIHQRARRYEHCIESPYIKK---LHAAYNEFFFAFAS 174 Query: 183 NQPDRCHIVDSAH 195 + ++D + Sbjct: 175 SNQ---CVIDVSQ 184 >gi|118477951|ref|YP_895102.1| hypothetical protein BALH_2297 [Bacillus thuringiensis str. Al Hakam] gi|118417176|gb|ABK85595.1| possible uridine kinase [Bacillus thuringiensis str. Al Hakam] Length = 202 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 17 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + ++ E V+ P + + + L+ D S+ Y Sbjct: 58 FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 107 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 108 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 156 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 157 ARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 195 >gi|229017874|ref|ZP_04174757.1| uridine kinase [Bacillus cereus AH1273] gi|229024078|ref|ZP_04180551.1| uridine kinase [Bacillus cereus AH1272] gi|228737220|gb|EEL87742.1| uridine kinase [Bacillus cereus AH1272] gi|228743465|gb|EEL93582.1| uridine kinase [Bacillus cereus AH1273] Length = 189 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 17/88 (19%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183 D TI +D P+DI + R R D+ E IH R+ +L+ Sbjct: 104 DITIFIDTPLDIAMARRIMR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 154 Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D + S + I+ + Sbjct: 155 VKPNSDIVLDGSLSISEIIDQIIEELNR 182 >gi|218903685|ref|YP_002451519.1| hypothetical protein BCAH820_2569 [Bacillus cereus AH820] gi|218537686|gb|ACK90084.1| hypothetical protein BCAH820_2569 [Bacillus cereus AH820] Length = 186 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 69/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-------------------KALYFDRYN 41 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + ++ E V+ P + + + L+ D S+ Y Sbjct: 42 FDNCP-TDICKWIDDGANYDEWVLTPLIKDIQHLIQD----SNVDY-----IIVDYPFAY 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 92 LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTMNEIHNDLMHYINY 140 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 141 ARKAYLEALHTVKPNSDIVLDGALSVDEIINQIEEELYR 179 >gi|328553023|gb|AEB23515.1| nucleotide kinase; phage SPbeta [Bacillus amyloliquefaciens TA208] Length = 165 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 44/146 (30%), Gaps = 32/146 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG + K+T L + L Y V G+ + S Sbjct: 4 IILEGTDCCYKSTVADKLGKEL---GYPVIK-----GSSF-----ELAKSGNEK------ 44 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +F +H L + ++ DR++ S+ Y + L + + I + Sbjct: 45 ---LF-----EHFNK-----LADEDNVIIDRYIYSNLVYAKKFKDYSILTEEQQRTIEKK 91 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYS 152 I L + +R+ R Sbjct: 92 IRDKAKVIYLHADPKVIKQRLLERGD 117 >gi|326674493|ref|XP_002664761.2| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Danio rerio] Length = 1754 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 24/114 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G GAGK+T +L+ L + V T P P R LL + ++ + Sbjct: 525 GPSGAGKSTLWRMLRAALGKTGRLVKQYTMNPKAMP-----RQQLLGHIDMDTREWSDGV 579 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++AR V+R ++CD +++SL + Sbjct: 580 LTSSAR-----QVVREPQEVNSWIICD-------------GDIDPEWIESLNSV 615 >gi|309807856|ref|ZP_07701788.1| deoxyguanosine kinase [Lactobacillus iners LactinV 01V1-a] gi|312873534|ref|ZP_07733583.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2052A-d] gi|315654171|ref|ZP_07907087.1| deoxyguanosine kinase [Lactobacillus iners ATCC 55195] gi|329919768|ref|ZP_08276719.1| deoxyguanosine kinase [Lactobacillus iners SPIN 1401G] gi|308168958|gb|EFO71044.1| deoxyguanosine kinase [Lactobacillus iners LactinV 01V1-a] gi|311090930|gb|EFQ49325.1| deoxyguanosine kinase [Lactobacillus iners LEAF 2052A-d] gi|315488867|gb|EFU78513.1| deoxyguanosine kinase [Lactobacillus iners ATCC 55195] gi|328937115|gb|EGG33543.1| deoxyguanosine kinase [Lactobacillus iners SPIN 1401G] Length = 221 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 45/229 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L ++L P + Sbjct: 4 IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123 A + L+ I+ AL +L DR + + +Q D + + + E+ Sbjct: 50 YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108 Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKR 173 ++ + PD I + + + +KR+Q R E D E +++ Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYDPTLE----DYYKRL 164 Query: 174 RQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + P ++D V I+ + E+ Sbjct: 165 LTYYKPWYDQYNYSPK--MVIDGDKYDFMNSDDDCDKVLKMIVAKLKEV 211 >gi|306816673|ref|ZP_07450805.1| hypothetical protein ECNC101_08644 [Escherichia coli NC101] gi|305850238|gb|EFM50697.1| hypothetical protein ECNC101_08644 [Escherichia coli NC101] Length = 252 Score = 44.6 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISRFLAQRERCLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|111224352|ref|YP_715146.1| adenylate kinase [Frankia alni ACN14a] gi|111151884|emb|CAJ63604.1| Adenylate kinase (ATP-AMP transphosphorylase) [Frankia alni ACN14a] Length = 198 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 64/212 (30%), Gaps = 36/212 (16%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64 G G+GK T + + R T + A + R E Sbjct: 4 VLLGPPGSGKGTQGARISA---RHGIPAISTGQLFDRQIAAGTDLGRRAERYVRAGELVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A RLD + L++G R Q LD + S Sbjct: 61 DEIVLDMVAERLDGSVDCAVGFLLDGF----------------PRTYPQAEALDRMLAAS 104 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF------L 178 + D I LD+ +D L R++ R D + +R ++F L Sbjct: 105 CGPL--DAVIDLDVDIDEVLDRIRRRAHTE-----DRVDD-GDDTARRRLKVFAEETAPL 156 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + VD A + VA I ++ + Sbjct: 157 RRYYRRSGLLRTVDGAGTPDEVAARIERVLAD 188 >gi|149278303|ref|ZP_01884441.1| guanylate kinase (GMP kinase) [Pedobacter sp. BAL39] gi|149231069|gb|EDM36450.1| guanylate kinase (GMP kinase) [Pedobacter sp. BAL39] Length = 190 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 51/227 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G I F GAGKTT + L + ++ + TRE G E + + Sbjct: 1 MIQGKLIIFSAPSGAGKTTIVKHLLKKFPELSFSISATTREARGDEQHEKDYYFISK--- 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E+ + A + F++ Y G + ++ Sbjct: 58 -------ESFLHKVAHQE--------------------FVEFEEVYNGTFYGTLRSEIER 90 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC----------LDYFERKDVMI 169 + +I D+ V+ GL R++ +Y A + + Sbjct: 91 IWNAGQH-------VIFDIDVEGGL-RLKRKYEEDALAIFVQPPSLEVLKERLTGRGTDS 142 Query: 170 HEKRRQIFLDIARN--QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 EK ++ F+ + D+ I+ + ++ ++ + + K Sbjct: 143 QEKLQERFIKAEKELNYADKFDIILKNYDLETACKEAEQLIGDFINK 189 >gi|116334282|ref|YP_795809.1| deoxynucleoside kinase [Lactobacillus brevis ATCC 367] gi|116099629|gb|ABJ64778.1| Deoxynucleoside kinase [Lactobacillus brevis ATCC 367] Length = 210 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 82/227 (36%), Gaps = 34/227 (14%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G GAGKT+ +LL L + P + + + + L + A Sbjct: 3 VLSGTIGAGKTSLTTLLAEHLHK----------PAFYESVDDNKILPLFYQNPQKYAFLL 52 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHLF 116 I F RLD I+ A + + +L DR F DS A E D L Sbjct: 53 QIYFLNKRLDS----IKAANADDETVL-DRSIFEDSLLFHLNADLGRATSTEVDIYDSLL 107 Query: 117 LDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +QE+ + + PD I +++ + L+R++ R E D +++ Sbjct: 108 ANMMQELPEATHKKNPDLLIHINISFETMLERIKKRGRSFEQIDHDP---SLYEYYQQLD 164 Query: 175 QIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 Q ++D + +D V V L+ ++++ L Sbjct: 165 QRYVDWYNAYDKSPKMQIDGDQ-LDFVEDPAARQQVLHLIDEKIASL 210 >gi|269969374|sp|P0CB90|NDUAA_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|111662247|gb|ABH12228.1| mitochondrial complex I subunit NDUFA10 [Pongo pygmaeus] Length = 355 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|297669866|ref|XP_002813106.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like [Pongo abelii] Length = 355 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|90417803|ref|ZP_01225715.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90337475|gb|EAS51126.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 527 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 58/220 (26%), Gaps = 60/220 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--------LS 56 I+ G+ G+GK+T + L T +++ R L L Sbjct: 334 RLIAVGGLSGSGKSTVAAALAPR--------IGPAPGARTLSSDRIRKRLCGVSAETRLE 385 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD----RFLD-SSYAYQGERDS 111 AA +H+ L G ++ D R +D S A Sbjct: 386 ANAYTSDTTERVYAAMAADAEHI-------LRLGYGVVADATFERAVDRSRIAATARDAG 438 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L LD+ L+RV R + A Sbjct: 439 VDFQGL-----------------WLDVDPAEMLRRVAARRNDPSDATTAI---------- 471 Query: 172 KRRQIFLDIARNQPDR-CHIVDSAHSFQSVATNILNIVWE 210 RQ +AR+ D +D + VA V Sbjct: 472 -VRQ---QLARDPGDIDWERIDGDGEPERVAETARRAVDR 507 >gi|241761713|ref|ZP_04759800.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374021|gb|EER63554.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 240 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 73/237 (30%), Gaps = 45/237 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRK---------------NYDVHVTREPGGTPAAEAA 50 I+ G +G+GKTT L +LQ + G + Sbjct: 14 LIALVGADGSGKTTVGQELLEWLQTMRPTAFCHLGKQTGNWGRAIARMPFVGKKLDKQVI 73 Query: 51 RHVLLSCGVDEFGAEAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDS-------- 101 + GA ++FA + R +R +G ++L DR+ + Sbjct: 74 ARSSKARDEKGAGATVSIVIFALSMRRVFRFLRMRRLHRKGFMILTDRYPQAVVPGPMDG 133 Query: 102 --SYAYQGERDSSQHLF--LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 A + ++ L +L + + PD I L++ ++ LKR A Sbjct: 134 PGLVARNPKGMIARFLTGREQALYDW-MASYKPDIVIRLNVDLETALKR----KPDHRPA 188 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 L+ K R + P +DS V + +++ + Sbjct: 189 SLER----------KVRDVPRLSFNGAP--ILDLDSREPLDQVIGKAKAAILDVIAR 233 >gi|218663489|ref|ZP_03519419.1| hypothetical protein RetlI_31465 [Rhizobium etli IE4771] Length = 198 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 50/156 (32%), Gaps = 36/156 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHV-TRE--PGGTPAAEAARHVLLSCGVDEFGAE 65 EG+ GAGKT + LQR+ Y V RE G P + Sbjct: 43 IEGVSGAGKT----AVAEELQRRGYHVVHGDRELAYSGDPTTGKPVD---GPADERVADR 95 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A H+ +V GK+ ++ DR S ++ + F+D Sbjct: 96 S-----AWVHAHHIWDV-------GKVRAMIVDR--RSLISFFCGGCRNLPRFVDWF--- 138 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 D LD+ +D +R+ R Sbjct: 139 -------DAVFELDVDLDTLKRRLAARPEDEYGGRP 167 >gi|171912477|ref|ZP_02927947.1| hypothetical protein VspiD_14895 [Verrucomicrobium spinosum DSM 4136] Length = 179 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 21/116 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I G +GKTT L R L+R+ Y V +E+AR VL S +DE + Sbjct: 1 MWIVITGAPSSGKTT----LLRELKRRGYAVV----------SESAREVLESGELDESRS 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + ++ R E I P G++++ DR L S AY+ L +L Sbjct: 47 DVQTLI--EERQQAKEQQIPP----GQVIVLDRALPDSLAYRRLG-GLDASDLRAL 95 >gi|323489030|ref|ZP_08094267.1| hypothetical protein GPDM_06795 [Planococcus donghaensis MPA1U2] gi|323397422|gb|EGA90231.1| hypothetical protein GPDM_06795 [Planococcus donghaensis MPA1U2] Length = 177 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 68/209 (32%), Gaps = 36/209 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I+ I G GKTT + L L + E + + Sbjct: 4 MKRPIVIAIASISGGGKTTIVEKLNEELPNS--EALYFDEYDLEGPENVIDWMNRGANYN 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+ V I L LD ++YQ H F++ Sbjct: 62 EWN----LTPIVKDLEKLVTKPIDYIL-----------LDFPFSYQHA---QTHSFIN-- 101 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179 + +D P+DI L R R +E + D E + + RQ +L+ Sbjct: 102 -----------VSFFIDTPLDIALARRTIR-DFQEGSKEDIIEAM-AHYNSQGRQAYLEM 148 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ +PD I+D + S + IL V Sbjct: 149 LSTIKPDADFIIDGSQSVARIVRLILEKV 177 >gi|289192350|ref|YP_003458291.1| shikimate kinase [Methanocaldococcus sp. FS406-22] gi|288938800|gb|ADC69555.1| shikimate kinase [Methanocaldococcus sp. FS406-22] Length = 177 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 61/206 (29%), Gaps = 58/206 (28%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I+ G G GKTT +L + L V E + L S ++ + Sbjct: 3 IAITGTPGVGKTTVSKILGKKL---GIKVI--------DITEIVKKYKLYSEKDEDMDSY 51 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + +E I + K ++ D + Sbjct: 52 VIDF-------EKLEKFIDEIEEKEKTIILDGHV-------------------------S 79 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ- 184 + PD I+L +I +R++ R + + E + LD+ + Sbjct: 80 HLLNPDYIIVLRCNPEIIKERLEKRGYKPKK------------VLENVQAEILDVCLCES 127 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVW 209 + + +D+ + + I+ + Sbjct: 128 KGKVYEIDTTNRDVEDIVNEIIEAIK 153 >gi|269969373|sp|P0CB89|NDUAA_PONAB RecName: Full=NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; AltName: Full=Complex I-42kD; Short=CI-42kD; AltName: Full=NADH-ubiquinone oxidoreductase 42 kDa subunit; Flags: Precursor gi|55729768|emb|CAH91612.1| hypothetical protein [Pongo abelii] Length = 355 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|56552214|ref|YP_163053.1| hypothetical protein ZMO1318 [Zymomonas mobilis subsp. mobilis ZM4] gi|260752278|ref|YP_003225171.1| nucleoside triphosphate hydrolase domain protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|56543788|gb|AAV89942.1| conserved predicted protein with nucleoside triphosphate hydrolase domain [Zymomonas mobilis subsp. mobilis ZM4] gi|258551641|gb|ACV74587.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 240 Score = 44.6 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 74/237 (31%), Gaps = 45/237 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------------VTREPGGTPAAEAARH 52 I+ G +G+GKTT L +LQ + R P + Sbjct: 14 LIALVGADGSGKTTVGQELLEWLQTMRPTAFCHLGKQTGNWGRAIARMPFVGRKLDKQVI 73 Query: 53 VLLSCGVDEFGAEA---EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------- 101 S DE GA A I + R +R +G ++L DR+ + Sbjct: 74 ARSSKARDEKGAGATVSIVIFALSMRRVFRFLRMRRLHRKGFMILTDRYPQAVVPGPMDG 133 Query: 102 --SYAYQGERDSSQHLF--LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 A + ++ L +L + + PD I L++ ++ LKR A Sbjct: 134 PGLVARNPKGMIARFLTGREQALYDW-MASYKPDIVIRLNVDLETALKR----KPDHRPA 188 Query: 158 CLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 L+ K R + P +DS V + +++ + Sbjct: 189 SLER----------KVRDVPRLSFNGAP--ILDLDSREPLDQVIGKAKAAILDVIAR 233 >gi|270208546|ref|YP_003329317.1| sulfate adenylate transferase subunit 1 [Sinorhizobium meliloti] gi|76880820|gb|ABA55990.1| sulfate adenylate transferase subunit 1 [Sinorhizobium meliloti] Length = 636 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 35/144 (24%) Query: 7 IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G+ G+GK+T +LL++ L + + +L G Sbjct: 465 IVWFTGLSGSGKSTVANLLEKRLTAEGKHAY-----------------ILDGDNVRHGLN 507 Query: 66 AEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + AAR++ V V R G I++ S +A + + L+ Sbjct: 508 KDLGFTDAARVENIRRVAEVARLMADAGLIVIV--SFISPFANERRIAREIAANIRFLEA 565 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146 +D P+++ R Sbjct: 566 ------------YVDTPLEVCEAR 577 >gi|75908882|ref|YP_323178.1| adenylate kinase [Anabaena variabilis ATCC 29413] gi|75702607|gb|ABA22283.1| Adenylate kinase [Anabaena variabilis ATCC 29413] Length = 184 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 69/209 (33%), Gaps = 34/209 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + G G+GK+T L L T E R + + E G Sbjct: 2 RLVVL-GGSGSGKSTQAQRLCSHL---GITQIST--------GEILREAI--SHLSELGR 47 Query: 65 EAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +A+ + + + + +IR L + + D ++ Y + LD L Sbjct: 48 QAQPYMVKGELVPDEMIIELIRLRLKKFD--VSDGWVLEGYPRTAFQAEELDFLLDEL-- 103 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLD 179 D I L +P + + R R + + +R+ + +++ + + Sbjct: 104 ----GQKLDWAIYLQVPEAVMVSRSLGRSLPDDQ--PEIVQRRVEIFYDRTVPILEYYDR 157 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 R ++ + + V NIL ++ Sbjct: 158 R-----RRLLTINGDQAPELVLQNILKLL 181 >gi|324526813|gb|ADY48716.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10 [Ascaris suum] Length = 245 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/119 (14%), Positives = 48/119 (40%), Gaps = 9/119 (7%) Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + + + A +F R D N + L G+ ++ +R S + + + Sbjct: 35 EMFYKDPMSDMSAVMRDRIFN-CRFDQYLNAVAHILNTGQGVVLERSPHSDFVFANAMRA 93 Query: 112 SQHLFLDS------LQEISVQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 ++ + +++ ++ ++ P + LD PV + L+ ++ ++ + + LD Sbjct: 94 KNYIGPEYFKHYFYVRKTALPKLHFWPHLVVYLDAPVSVCLQNIRKEGNVNKVSVLDEI 152 >gi|229586988|ref|YP_002845489.1| adenylate kinase [Rickettsia africae ESF-5] gi|259494016|sp|C3PP86|KAD_RICAE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|228022038|gb|ACP53746.1| Adenylate kinase [Rickettsia africae ESF-5] Length = 212 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKI-----------NLPHIAIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ +L + + Y G + + + Sbjct: 45 EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KR+ RYS + + DY Sbjct: 101 KEKIK---IIYFDVSDELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IV+ + S Q + +I I+ Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKSEQEIEIDIQKILK 210 >gi|325270190|ref|ZP_08136797.1| hypothetical protein HMPREF9141_2007 [Prevotella multiformis DSM 16608] gi|324987491|gb|EGC19467.1| hypothetical protein HMPREF9141_2007 [Prevotella multiformis DSM 16608] Length = 375 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 9/108 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V + E + ++ + Sbjct: 19 MKR---IVLTGGPCAGKTTALVKVIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNRAFF 75 Query: 61 EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A E + R + I+ I++CDR AY Sbjct: 76 YEGEKATLETQLDLEDRFTRMAETIK----TPTIIVCDRGTMDISAYM 119 >gi|321473657|gb|EFX84624.1| hypothetical protein DAPPUDRAFT_99663 [Daphnia pulex] Length = 236 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 37/226 (16%), Positives = 73/226 (32%), Gaps = 36/226 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFGA 64 + EG G+GKTT ++ ++ DV V +EP ++ LL + Sbjct: 10 VVIEGNIGSGKTTLLNYFSKY-----RDVEVLQEPVEKWRNVDGHNLLSLLYDDPARWSL 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS----- 119 + V H + K+ L +R L S Y + + ++ Sbjct: 65 TFQTHVQLTMLDHHTKET------SAKVKLMERSLFSGR-YCFVENLHESKLMEPAEYAV 117 Query: 120 LQEISVQEVM-----PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF----ERKDVMI 169 + E + D + L ++ KR+ R E L Y E + + Sbjct: 118 ISEWFKWIIKNVDVEVDLIVYLRSDPEVVHKRILQRARKEEKTVPLSYIVALHEIHEDWL 177 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 H K + P +D+ + I + +++ ++ Sbjct: 178 HHKV-------SHPVPAPVLEIDANVDLTEMLKQISLVENQILNRK 216 >gi|189183972|ref|YP_001937757.1| adenylate kinase [Orientia tsutsugamushi str. Ikeda] gi|254807000|sp|B3CT26|KAD_ORITI RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|189180743|dbj|BAG40523.1| adenylate kinase [Orientia tsutsugamushi str. Ikeda] Length = 214 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 75/239 (31%), Gaps = 61/239 (25%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 M L + F G G+GK T SLL + V T T A+ + + S + Sbjct: 1 MRISLILVFIGPPGSGKGTQASLLSEKFSIISVGKVLRTVMESNTAEADVVKKFIKSGKL 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 IV A + + K ++ D + RD Q FL Sbjct: 61 VP-SNITNKIVVNA----------LKNIDQCKSIILDGY---------PRDIFQADFLQE 100 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--------------K 165 ++ + + D+ + L+R+ R S + + + + Sbjct: 101 NLQMDFK------VLFFDIDDAVVLRRLSGRISCTDCGTI--YNKLYCMPKINGVCDICN 152 Query: 166 DVMIHEKR---------R-QIF-------LDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + R + + L+ + Q D+ ++D+ S +++ I I Sbjct: 153 SSSFQNRVDDDESIIKLRLESYKKETLPLLEFYKAQ-DKLTLIDANQSTENILKKIKKI 210 >gi|197102140|ref|NP_001126546.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Pongo abelii] gi|55731865|emb|CAH92642.1| hypothetical protein [Pongo abelii] Length = 390 Score = 44.2 bits (104), Expect = 0.011, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 45/105 (42%), Gaps = 8/105 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 123 SNDGNTYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLDAMYNQGFIRK 181 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ +++ + + P I +D+PV +R+Q + E Sbjct: 182 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHE 226 >gi|92113810|ref|YP_573738.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Chromohalobacter salexigens DSM 3043] gi|91796900|gb|ABE59039.1| adenylylsulfate kinase [Chromohalobacter salexigens DSM 3043] Length = 638 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 39/107 (36%), Gaps = 28/107 (26%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G I F G+ G+GK+T + L+ L R+ Y +LL Sbjct: 469 HAGKCIWFTGLSGSGKSTLANALEVELNRRGYHT-----------------MLLDGDNIR 511 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILL--------CDR 97 G + + A R +++ + + G I++ DR Sbjct: 512 HGLCKDLAMSEADRTENIRRVGEIAKLFADAGIIVITAFISPFRSDR 558 >gi|282866217|ref|ZP_06275264.1| 3-dehydroquinate synthase [Streptomyces sp. ACTE] gi|282559001|gb|EFB64556.1| 3-dehydroquinate synthase [Streptomyces sp. ACTE] Length = 548 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 50/226 (22%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 SG I G G GK+T LL L + + DV T A +A + G Sbjct: 2 SGPLIVLVGPMGVGKSTVGELLAERLGTTYRDTDADVVAT-------AGKAIAEIFFDEG 54 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + F + +R A+ +L G Sbjct: 55 EEHF-------------RELERRAVREAVERHTGVLA----------LGGGAVLDAETR- 90 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ P L + V+ ++RV + A R+ + + RR ++ Sbjct: 91 -----ALLAGRP--VAYLAMDVEEAVRRVGLNTARPLLAVNPR--RQWRELMDARRHLYE 141 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 ++A R + + + VA +L+ + EL++ P++S ++ Sbjct: 142 EVA-----RTTVATDERTPEEVAQAVLDAL-ELLEAVAEPVASGRE 181 >gi|54660021|gb|AAV37189.1| cytoplasmic dynein heavy chain 2 protein [Tetrahymena thermophila] Length = 4236 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G GKTT LK+ ++ V P P R LL ++ Sbjct: 1951 VVLVGPSGCGKTTIWKTLKKAYEKMGTQVKAYVMNPKSMP-----RSQLLGLMNNDTREF 2005 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ ++AR VI+ + ++CD +++SL + Sbjct: 2006 TEGVLTSSAR-----EVIKESSDVISWIICD-------------GDIDPEWIESLNSV 2045 >gi|148226011|ref|NP_001088163.1| hypothetical protein LOC494987 [Xenopus laevis] gi|54035098|gb|AAH84070.1| LOC494987 protein [Xenopus laevis] Length = 263 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 82/242 (33%), Gaps = 41/242 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG AGK+T +++LK+ + +DV + R + + L Sbjct: 24 ISIEGNIAAGKSTFVNILKKANEE--WDVVPEPIARWCNIQSCKDEFEELTTSQKSGGNL 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R ++ P L + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQSYACLSRIRAQLKALGGKLKEAENPVLFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + ++ D I L + L RV R E Sbjct: 142 YEAECMNETEWTVYQDWHDWMNSQFGADLELDGIIYLRAIPEKCLNRVYTRGREEEQGIP 201 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSA---HSFQSVATNILNIVWE 210 ++Y E+ + + H R F + + P +D + +++ V E Sbjct: 202 MEYLEKLHYKHETWLHHRTLRTDFEYL-QEIP--ILTLDVNEDFRDNKQKQESLIEKVKE 258 Query: 211 LV 212 + Sbjct: 259 FL 260 >gi|323449759|gb|EGB05645.1| hypothetical protein AURANDRAFT_54579 [Aureococcus anophagefferens] Length = 231 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 35/105 (33%), Gaps = 6/105 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVDEF 62 I G AGKTT +S L L +DV V E A V G + Sbjct: 62 IVITGGPCAGKTTAMSKLSLRLTNMGFDVFVVPELATLTITGGASPGSYDVAQHVGWETA 121 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 + + + + + L +LLCDR AY G Sbjct: 122 ILREQ--MHLEDCFEEIAAKVSLPLGRHAVLLCDRGTMDVLAYVG 164 >gi|254383587|ref|ZP_04998937.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Streptomyces sp. Mg1] gi|194342482|gb|EDX23448.1| bifunctional shikimate kinase/3-dehydroquinate synthase [Streptomyces sp. Mg1] Length = 172 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 41/209 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I G G+GK+T LL L T T + + G Sbjct: 1 MNRGPLIVLVGPMGSGKSTVGELLAERL---GVPYRDTDADIVTATGREISDLFIDEGEP 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + + A+ E +L G + L Sbjct: 58 HF-------------RELERRAVAAAVAEHTGVLS----------LGGGAVLDGGTRELL 94 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V L + V+ ++RV + A R+ + E RR ++ ++ Sbjct: 95 AGLPVA--------YLSMDVEEAVRRVGLGAARPLLAVNPR--RQWRELMEARRHLYTEV 144 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVW 209 A R + + + VA +L+ + Sbjct: 145 A-----RVVVATDERTPEEVAQAVLDALE 168 >gi|118405184|ref|NP_001072968.1| dihydroxyacetone kinase 2 [Gallus gallus] gi|53133474|emb|CAG32066.1| hypothetical protein RCJMB04_17b6 [Gallus gallus] gi|194303492|gb|ACF41169.1| deoxyadenosine kinase [Gallus gallus] Length = 265 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 62/189 (32%), Gaps = 36/189 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV----------HVTREPGGTPAAEAARH--VL 54 IS EG AGK+T + LL++ ++V T E + + + L Sbjct: 27 ISIEGNIAAGKSTLVRLLEKH--SDEWEVIPEPIAKWCNIQTSEDECKELSTSQKSGGNL 84 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI--------LLCDRFLDSS 102 L D+ A A R I L E + + DR++ +S Sbjct: 85 LQMLYDKPTRWAYTFQTYACLSRVRAQL--KPISAKLHEAEHPVQFFERSVYSDRYVFAS 142 Query: 103 YAYQGERDSSQHLFLDS------LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 ++ + + L + E+ D I L ++R+Q R E Sbjct: 143 NLFESGNINETEWAIYQDWHSWLLNQF-QSEIELDGIIYLRTTPQKCMERLQKRGRKEEE 201 Query: 157 A-CLDYFER 164 L+Y E Sbjct: 202 GIDLEYLEN 210 >gi|71745092|ref|XP_827176.1| adenylate kinase [Trypanosoma brucei TREU927] gi|70831341|gb|EAN76846.1| adenylate kinase, putative [Trypanosoma brucei] gi|261331391|emb|CBH14385.1| adenylate kinase, putative [Trypanosoma brucei gambiense DAL972] Length = 200 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 62/235 (26%), Gaps = 70/235 (29%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F G G+GK T + L Y A + R + Sbjct: 10 FFVL-GGPGSGKGTVCARLVEEF---GY--------THFSAGDLLRQASRDKTTE----- 52 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL------------LCDRFLDSSYAYQGERDSSQ 113 V I L+EG I+ L Y G Sbjct: 53 -------------VAQKISQILVEGGIVPSELTVALLKNALNTHPSPRGYVIDGFPRKMD 99 Query: 114 HLFLDSLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +F+ ++++P + D + R+ R S D E Sbjct: 100 QMFMFE------EDIVPAKAILFFDCTEETMEARLIGRASSGSGRDDDNIE--------T 145 Query: 173 RRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIV----WELVQK 214 R+ F A + R + VD S + V ++ I EL++K Sbjct: 146 IRRRFRTNAEQCVPVVEHYKKQGRLYTVDGNRSREEVYADVKKIFLKEGEELLKK 200 >gi|16130884|ref|NP_417458.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|26249552|ref|NP_755592.1| ATP-binding protein yghR [Escherichia coli CFT073] gi|89109759|ref|AP_003539.1| hypothetical protein with nucleoside triphosphate hydrolase domain [Escherichia coli str. K-12 substr. W3110] gi|170018757|ref|YP_001723711.1| hypothetical protein EcolC_0709 [Escherichia coli ATCC 8739] gi|170082532|ref|YP_001731852.1| nucleoside triphosphate hydrolase domain-containing protein [Escherichia coli str. K-12 substr. DH10B] gi|191167533|ref|ZP_03029345.1| conserved hypothetical protein [Escherichia coli B7A] gi|194436748|ref|ZP_03068848.1| conserved hypothetical protein [Escherichia coli 101-1] gi|238902102|ref|YP_002927898.1| hypothetical protein BWG_2702 [Escherichia coli BW2952] gi|253772177|ref|YP_003035008.1| hypothetical protein ECBD_0754 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254162938|ref|YP_003046046.1| hypothetical protein ECB_02860 [Escherichia coli B str. REL606] gi|300916909|ref|ZP_07133612.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300923641|ref|ZP_07139669.1| hypothetical protein HMPREF9548_01834 [Escherichia coli MS 182-1] gi|300950812|ref|ZP_07164698.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|300958365|ref|ZP_07170506.1| hypothetical protein HMPREF9547_04079 [Escherichia coli MS 175-1] gi|301643650|ref|ZP_07243691.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|307139674|ref|ZP_07499030.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli H736] gi|309794095|ref|ZP_07688520.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|312972754|ref|ZP_07786927.1| uncharacterized ATP-binding protein yghR [Escherichia coli 1827-70] gi|331643685|ref|ZP_08344816.1| hypothetical ATP-binding protein YghR [Escherichia coli H736] gi|54040235|sp|P64573|YGHR_ECOL6 RecName: Full=Uncharacterized ATP-binding protein yghR gi|54042400|sp|P64572|YGHR_ECOLI RecName: Full=Uncharacterized ATP-binding protein yghR gi|26109960|gb|AAN82165.1|AE016766_253 Hypothetical ATP-binding protein yghR [Escherichia coli CFT073] gi|882513|gb|AAA69151.1| ORF_f252; was ORF_f87p and ORF_f234p before splice [Escherichia coli str. K-12 substr. MG1655] gi|1789357|gb|AAC76020.1| predicted ATP-binding protein [Escherichia coli str. K-12 substr. MG1655] gi|85675792|dbj|BAE77045.1| hypothetical protein with nucleoside triphosphate hydrolase domain [Escherichia coli str. K12 substr. W3110] gi|169753685|gb|ACA76384.1| conserved hypothetical protein [Escherichia coli ATCC 8739] gi|169890367|gb|ACB04074.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli str. K-12 substr. DH10B] gi|190902390|gb|EDV62127.1| conserved hypothetical protein [Escherichia coli B7A] gi|194424230|gb|EDX40217.1| conserved hypothetical protein [Escherichia coli 101-1] gi|238863053|gb|ACR65051.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli BW2952] gi|242378540|emb|CAQ33326.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli BL21(DE3)] gi|253323221|gb|ACT27823.1| hypothetical protein ECBD_0754 [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253974839|gb|ACT40510.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli B str. REL606] gi|253978994|gb|ACT44664.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli BL21(DE3)] gi|284923011|emb|CBG36103.1| conserved hypothetical protein [Escherichia coli 042] gi|300314949|gb|EFJ64733.1| hypothetical protein HMPREF9547_04079 [Escherichia coli MS 175-1] gi|300415879|gb|EFJ99189.1| conserved hypothetical protein [Escherichia coli MS 115-1] gi|300420082|gb|EFK03393.1| hypothetical protein HMPREF9548_01834 [Escherichia coli MS 182-1] gi|300449907|gb|EFK13527.1| conserved hypothetical protein [Escherichia coli MS 116-1] gi|301078034|gb|EFK92840.1| conserved hypothetical protein [Escherichia coli MS 146-1] gi|308122502|gb|EFO59764.1| conserved hypothetical protein [Escherichia coli MS 145-7] gi|309703420|emb|CBJ02759.1| conserved hypothetical protein [Escherichia coli ETEC H10407] gi|310332696|gb|EFP99909.1| uncharacterized ATP-binding protein yghR [Escherichia coli 1827-70] gi|315614986|gb|EFU95624.1| uncharacterized ATP-binding protein yghR [Escherichia coli 3431] gi|323936011|gb|EGB32306.1| yghR protein [Escherichia coli E1520] gi|323960965|gb|EGB56584.1| gyghR [Escherichia coli H489] gi|331037156|gb|EGI09380.1| hypothetical ATP-binding protein YghR [Escherichia coli H736] Length = 252 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 DY E +D + + K + + +DS + V V Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239 >gi|310777987|ref|YP_003966320.1| guanylate kinase [Ilyobacter polytropus DSM 2926] gi|309747310|gb|ADO81972.1| guanylate kinase [Ilyobacter polytropus DSM 2926] Length = 184 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 38/187 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G G GAGK+T L++R L+ TR P + L Sbjct: 1 MKKGDLFVVSGPSGAGKSTVCKLVRRMLEINLAVSATTRAPRAGEVDGREYYFLTMEEFQ 60 Query: 61 EFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E + +A ++ +++ + L EGK ++ L + Sbjct: 61 NKIKNNEFLEYANVHGNYYGTLKSEVEERLNEGKNII--------------------LEI 100 Query: 118 DSLQEISVQEVM-----PDC-TIILDLPVDIGLK-RVQNRYSLRESACLDYFER--KDVM 168 D + PD I P L+ R++ R + E E K++ Sbjct: 101 D-----VQGGIQAREEYPDVNLIFFKTPTKEDLEDRLRGRGTEDEETVRIRLENSLKELE 155 Query: 169 IHEKRRQ 175 EK Sbjct: 156 F-EKYYD 161 >gi|304437417|ref|ZP_07397376.1| guanylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369673|gb|EFM23339.1| guanylate kinase [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 197 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 68/224 (30%), Gaps = 38/224 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I G G GK T L + + V T + R Sbjct: 1 MKKGLLIVISGASGTGKGTVCKELLARERGVAFSVSAT--------SRTPREGEQDGREY 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F E A A +E + + + + A R S+ L + Sbjct: 53 YFRTRTEFETMIA----------EGAFLEYADVYGN-YYGTPLAPIEARRSAGEDILLEI 101 Query: 121 Q---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++V E PD T I LP + +R+ R + + + I RR Sbjct: 102 DTQGALNVMERCPDGTFIFLLPPSLEELRRRITGRGTESKESLARRLAAARDEIRLGRRY 161 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV-WELVQKRVSP 218 + + + ++ A I I+ E ++ ++P Sbjct: 162 RYAVL-------------NDTVENAAAQIQTILAAERLRADMNP 192 >gi|323168172|gb|EFZ53859.1| hypothetical protein SS53G_1653 [Shigella sonnei 53G] Length = 252 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 DY E +D + + K + + +DS + V V Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239 >gi|284163534|ref|YP_003401813.1| signal recognition particle-docking protein FtsY [Haloterrigena turkmenica DSM 5511] gi|284013189|gb|ADB59140.1| signal recognition particle-docking protein FtsY [Haloterrigena turkmenica DSM 5511] Length = 529 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 22/158 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L R+ + + Y + G T A A + + G + Sbjct: 334 IVFTGVNGVGKTTSIAKLSRYFEERGYSTVMA--NGDTYRAGANEQI--EQHAEALGTKL 389 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123 + + + A ++L D R + +D L++I Sbjct: 390 ITHEQGGDPAAVLYDGVEYAEANDIDVVLGD---------TAGRLHTNEGLMDQLEKIDR 440 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160 V PD T+ + + + NR E+A +D Sbjct: 441 VVG---PDMTLF--VDEAVAGQDAVNRAREFNEAAEID 473 >gi|302418534|ref|XP_003007098.1| thermosensitive gluconokinase [Verticillium albo-atrum VaMs.102] gi|261354700|gb|EEY17128.1| thermosensitive gluconokinase [Verticillium albo-atrum VaMs.102] Length = 1195 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 75/211 (35%), Gaps = 49/211 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I G G+GK+T ++L L+ P E +L S Sbjct: 1018 MKKTVVIVA-GPCGSGKSTLAAVLSHKLK--------------VPFIEG--DLLHSRASV 1060 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E A ++A + A R +E + + A+ + D DS + + + D+L Sbjct: 1061 EKMAASQA-LTDADRSAWLERLGKRAVET----ISDLGYDSVV---LSCSALRRPYRDAL 1112 Query: 121 QEISVQEVMPDCTIILDL--PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++I Q+V TI LDL ++ R R + L V + Sbjct: 1113 RQIVGQDVQ---TIFLDLQGEPELLAARTNGRVDHYMPSTL-------VDSQVAVYET-- 1160 Query: 179 DIARNQPDR----CHIVDSAHSFQSVATNIL 205 PD +D+A + + VA+ L Sbjct: 1161 ------PDVNEVDVLPLDAAPAPEEVASEAL 1185 >gi|229157231|ref|ZP_04285311.1| hypothetical protein bcere0010_34150 [Bacillus cereus ATCC 4342] gi|228626295|gb|EEK83042.1| hypothetical protein bcere0010_34150 [Bacillus cereus ATCC 4342] Length = 134 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 31/144 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 8 ISLQGPMASGKTT----LAKRLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 56 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 57 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112 Query: 116 FLDSLQEISVQEVMPDCTIILDLP 139 L L+E D LD+ Sbjct: 113 ELYKLRE-----CRSDAIFYLDVS 131 >gi|116872992|ref|YP_849773.1| dephospho-CoA kinase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741870|emb|CAK20994.1| dephospho-CoA kinase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 200 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 83/215 (38%), Gaps = 30/215 (13%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60 G+ G+ GK+T +++++ L + EPG AE + +LL+ G Sbjct: 6 GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVEPGTDGLAEIVAYFGKGILLTDGTL 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE I + + + + P + E +L +R Y + + L Sbjct: 66 NRPKLAEQIFRNKEKREKLNEITHPRVKE--YMLAER-----KRYFEAGEKVVFFDIPLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E ++ ++ D I++ + LKR+ R +L + L + + I EK Sbjct: 119 FESHLESLV-DQIIVVWTTPETELKRLMERNNLTKKDALARINSQ-MGIDEK-------- 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 A+ ++D+ S + +L I+ V+ + Sbjct: 169 AKKAD---FVIDNNESLEKTQKQVLAIIDRFVKNK 200 >gi|322695052|gb|EFY86867.1| glucokinase [Metarhizium acridum CQMa 102] Length = 224 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 47/208 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKTT L L P E L + + + Sbjct: 54 GPAGCGKTTVAEHLANAL--------------DIPYIEGD---LYHPQSNIDKMSSGIPL 96 Query: 71 FAAARLDHVENVIRPAL------MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A R D + + + A +G ++ C A + + + + + Sbjct: 97 TDADRWDWLTELRKQANSRIHDGAKGVVVAC-------SALKLKYRDVIRVAAYWDRSLI 149 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + I L P ++ LKRV R A + I E+ R+ ++ Sbjct: 150 IHF------IFLHAPAELLLKRVTARKGHYMGAN---MIKSQFDILERPRE-------DE 193 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELV 212 D VD++ V + L V ++ Sbjct: 194 ID-VVTVDASREVDEVKEDALKKVKAMM 220 >gi|261749418|ref|YP_003257104.1| guanylate kinase [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497511|gb|ACX83961.1| guanylate kinase (GMP kinase) [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 194 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 53/180 (29%), Gaps = 36/180 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-------RHV 53 M G I G G+GKTT L + + V T P + Sbjct: 1 MKKGKMIILSGPSGSGKTTISKHLLSKITELKFSVSCTTRPIRNKEKHGIDYYFISTKKF 60 Query: 54 LLSCGVDEFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + +F E +F +++ I E K +L D D Sbjct: 61 ISKIKKYQFAEWEEVYPKLFYGT----LKSEISKTWNENKHILFD------------VDV 104 Query: 112 SQHLFLDSLQEISVQEVMPD--CTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVM 168 L L L PD +I + + ++I +R+ R S E+ + Sbjct: 105 KGGLHLKKLY--------PDNSLSIFVLVHSIEILKERLLKRNYENFSKIKTRLEKASIE 156 >gi|20271368|gb|AAM18618.1|AF497801_1 adenylate kinase [Trypanosoma brucei] Length = 222 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 62/235 (26%), Gaps = 70/235 (29%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F G G+GK T + L Y A + R + Sbjct: 32 FFVL-GGPGSGKGTVCARLVEEF---GY--------THFSAGDLLRQASRDKTTE----- 74 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKIL------------LCDRFLDSSYAYQGERDSSQ 113 V I L+EG I+ L Y G Sbjct: 75 -------------VAQKISQILVEGGIVPSELTVALLKNALNTHPSPRGYVIDGFPRKMD 121 Query: 114 HLFLDSLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +F+ ++++P + D + R+ R S D E Sbjct: 122 QMFMFE------EDIVPAKAILFFDCTEETMEARLIGRASSGSGRDDDNIE--------T 167 Query: 173 RRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIV----WELVQK 214 R+ F A + R + VD S + V ++ I EL++K Sbjct: 168 IRRRFRTNAEQCVPVVEHYKKQGRLYTVDGNRSREEVYADVNKIFLKEGEELLKK 222 >gi|90961490|ref|YP_535406.1| deoxyguanosine kinase [Lactobacillus salivarius UCC118] gi|227890580|ref|ZP_04008385.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741] gi|90820684|gb|ABD99323.1| Deoxyguanosine kinase [Lactobacillus salivarius UCC118] gi|227867518|gb|EEJ74939.1| deoxyguanosine kinase [Lactobacillus salivarius ATCC 11741] gi|300214336|gb|ADJ78752.1| Deoxyguanosine kinase [Lactobacillus salivarius CECT 5713] Length = 240 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 35/212 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60 I+ GI G+GK++ LL + L + VT P G A R D Sbjct: 2 ITLAGIIGSGKSSLTKLLSQELNTTPFFEPVTDNPVLPLFYKGNELAAKKRAA---GATD 58 Query: 61 EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYA 104 + F R +I+ A+ G + DR + + Sbjct: 59 VTNPYTYLLQTFFLNRR---FKMIKEAM-RGDNNILDRSIYEDAMFMRMNTELGNATQIE 114 Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 YQ ++ ++ LD + +++ + D I++ + +KR++ R E D Sbjct: 115 YQIYQELLKN-MLDEI-KLATPKNHKDLMILIKVSYPTMIKRIEKRGREYEQVTNDP--- 169 Query: 165 KDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH 195 V +++ + + + R ++D Sbjct: 170 SLVDYYKRLLEFYDEWERTYDKSPLLVIDGDK 201 >gi|307594587|ref|YP_003900904.1| hypothetical protein Vdis_0453 [Vulcanisaeta distributa DSM 14429] gi|307549788|gb|ADN49853.1| hypothetical protein Vdis_0453 [Vulcanisaeta distributa DSM 14429] Length = 234 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 63/174 (36%), Gaps = 29/174 (16%) Query: 1 MN--SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLL 55 MN +G I G G GK+T I L L + + V + G LL Sbjct: 1 MNIGNGKLIVVLGPVGVGKSTVIRHLMAILNNRGFRVRREFIKSFHGPAYLLWVIMAKLL 60 Query: 56 SCGVDEFG----------AEAEAIVFAAARLDHVEN------VIRPALMEGKILLCDRFL 99 + A ++ +A +D N VI + + G ++ + +L Sbjct: 61 NLPGKYAPWYLIPKSGRVKLASILMILSAYIDVFINVPIKLLVIFMSKVLGFTVVSEEYL 120 Query: 100 DSS-----YAYQ--GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 S Y+Y G R S L + L + ++ PD T++L+ L+R Sbjct: 121 PSMLFDYLYSYIDLGVRGSLSRLPIRVLLSMFIR-YRPDVTVVLNAGDAELLRR 173 >gi|288802578|ref|ZP_06408017.1| deoxynucleoside kinase family protein [Prevotella melaninogenica D18] gi|302346375|ref|YP_003814673.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella melaninogenica ATCC 25845] gi|288335106|gb|EFC73542.1| deoxynucleoside kinase family protein [Prevotella melaninogenica D18] gi|302150349|gb|ADK96610.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella melaninogenica ATCC 25845] Length = 204 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 30/195 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GKTT ++L +R + + + + + Sbjct: 3 IAIAGNIGSGKTTLTTMLA---KRYGWKPRFESVDYNPYLEDYYKDI------KRWSFPM 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118 E D +E + ++ DR + ++YA D +++ Sbjct: 54 EVFFLKERFKDLLE-----ISRSDESVVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 ++++ PD I L V + ++ R E LDY E KR + F Sbjct: 109 LFEDMTDAVQFPDLMIYLRASVSHLVSNIEKRGREYEQKMPLDYLEN-----LNKRYEEF 163 Query: 178 LDIARNQPDRCHIVD 192 + R +D Sbjct: 164 IK--EKYKGRVLTID 176 >gi|228928702|ref|ZP_04091738.1| hypothetical protein bthur0010_33960 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229123169|ref|ZP_04252375.1| hypothetical protein bcere0016_34590 [Bacillus cereus 95/8201] gi|228660262|gb|EEL15896.1| hypothetical protein bcere0016_34590 [Bacillus cereus 95/8201] gi|228831021|gb|EEM76622.1| hypothetical protein bthur0010_33960 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 195 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 55/167 (32%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS G +GKTT L + L+ V P P E + + L E Sbjct: 8 ISLPGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDVNSKEG---- 56 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 57 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 112 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 113 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154 >gi|149598466|ref|XP_001515329.1| PREDICTED: similar to Cytidylate kinase, partial [Ornithorhynchus anatinus] Length = 171 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 26/150 (17%) Query: 78 HVENVIRPALMEGKIL-------LCDRFLDSSYA--YQGERDSSQHLFL--DSLQEIS-V 125 +I + EGKI+ L R +D + A Q + D+LQ + Sbjct: 23 QYGELIEKYIREGKIVPVEITISLLKREMDETMAANVQKSKFLIDGFPRNQDNLQGWNKT 82 Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182 E D + D ++ ++R R + + + + EKR Q +L + Sbjct: 83 MEGKADVAFVLFFDCDNEVCIERCLERGRSSGRSDDNR---ESL---EKRIQTYLQSTKP 136 Query: 183 -----NQPDRCHIVDSAHSFQSVATNILNI 207 + + VD++ S V ++ I Sbjct: 137 IIDLYEKMGKVRKVDASKSVDEVFDRVVTI 166 >gi|330906300|ref|XP_003295423.1| hypothetical protein PTT_00912 [Pyrenophora teres f. teres 0-1] gi|311333295|gb|EFQ96476.1| hypothetical protein PTT_00912 [Pyrenophora teres f. teres 0-1] Length = 206 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 62/172 (36%), Gaps = 29/172 (16%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G GAGK+T +S L + + + + + H TR P GT + + + Sbjct: 20 IVISGPSGAGKSTILSRLFEEYPGKFGFSISHTTRGPRGTEQNGKEYYFVTKDEFQDLIE 79 Query: 65 E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E F + +G+I + D + ++ ++ Sbjct: 80 KKGFVEHAQFGGNYYGTSVKAVNDIAEKGQICILD------------------IEMEGVK 121 Query: 122 EISVQ--EVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 +++ P + P +I KR+++R + +E A L + V + Sbjct: 122 QVANHPTFPRPR--FLFLQPPSMEILEKRLRSRATDKEEAILKRLNQAKVEM 171 >gi|301299696|ref|ZP_07205949.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852708|gb|EFK80339.1| deoxyguanosine kinase [Lactobacillus salivarius ACS-116-V-Col5a] Length = 238 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 35/212 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60 I+ GI G+GK++ LL + L + VT P G A R D Sbjct: 2 ITLAGIIGSGKSSLTKLLSQELNTTPFFEPVTDNPVLPLFYKGNELAAKKRAA---GATD 58 Query: 61 EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYA 104 + F R +I+ A+ G + DR + + Sbjct: 59 VTNPYTYLLQTFFLNRR---FKMIKEAM-RGDNNILDRSIYEDAMFMRMNTELGNATQIE 114 Query: 105 YQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 YQ ++ ++ LD + +++ + D I++ + +KR++ R E D Sbjct: 115 YQIYQELLKN-MLDEI-KLATPKNHKDLMILIKVSYPTMIKRIEKRGREYEQVTNDP--- 169 Query: 165 KDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH 195 V +++ + + + R ++D Sbjct: 170 SLVDYYKRLLEFYDEWERTYDKSPLLVIDGDK 201 >gi|298491417|ref|YP_003721594.1| adenylate kinase ['Nostoc azollae' 0708] gi|298233335|gb|ADI64471.1| adenylate kinase ['Nostoc azollae' 0708] Length = 184 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 45/211 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G GAGK T L FL + T + R + A+ Sbjct: 6 FLGPPGAGKGTQAKNLAEFL---HIPHIST--------GDILRQAIKDQTPLGLKAQVYM 54 Query: 69 IVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEI 123 VE++++ L + +L D F R +Q FL+ L I Sbjct: 55 DKGELVPDQLVEDLVKERLNQPDAQNGWIL-DGF---------PRKVTQAAFLEELLTTI 104 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 + + LD P + + R+ R +S + +R +++ + Sbjct: 105 GQGG---EKVVNLDAPDETVISRLLGRGRKDDSE----------DVIRRRLEVYREETAP 151 Query: 180 IARNQPDRCHI--VDSAHSFQSVATNILNIV 208 + R + V+ S + V T + N++ Sbjct: 152 LIDYYGARHKLLTVNGNQSPEEVTTELQNLI 182 >gi|192360909|ref|YP_001983009.1| shikimate kinase [Cellvibrio japonicus Ueda107] gi|190687074|gb|ACE84752.1| shikimate kinase [Cellvibrio japonicus Ueda107] Length = 177 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 44/196 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T LL + L + D T A + +L G + A E ++ Sbjct: 13 GMPGAGKSTIGLLLAKHLAK---DFVDTDLLIQLRAGKTLDDILREQGYLKLRALEEEVL 69 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 A +HV G + D + L++ P Sbjct: 70 LATDYPNHV------IATGGSAVYSD------------------KGMQHLKQFG-----P 100 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 + LD+ +R+ N + + + + E+ R +++ A I Sbjct: 101 --VVFLDVTQAELEQRIHNMETRGIAKHPS--QSFSDLFLER-RDLYMRYAD------VI 149 Query: 191 VDSA-HSFQSVATNIL 205 +D + +A I+ Sbjct: 150 IDGNHKTLDQLADEII 165 >gi|118378437|ref|XP_001022394.1| Dynein heavy chain family protein [Tetrahymena thermophila] gi|89304161|gb|EAS02149.1| Dynein heavy chain family protein [Tetrahymena thermophila SB210] Length = 4286 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G GKTT LK+ ++ V P P R LL ++ Sbjct: 2011 VVLVGPSGCGKTTIWKTLKKAYEKMGTQVKAYVMNPKSMP-----RSQLLGLMNNDTREF 2065 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ ++AR VI+ + ++CD +++SL + Sbjct: 2066 TEGVLTSSAR-----EVIKESSDVISWIICD-------------GDIDPEWIESLNSV 2105 >gi|325294380|ref|YP_004280894.1| Guanylate kinase [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064828|gb|ADY72835.1| Guanylate kinase [Desulfurobacterium thermolithotrophum DSM 11699] Length = 217 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 36/171 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G GKTT L + + V + TR+P + + Sbjct: 6 KGLLIVISAPSGTGKTTLSHKLLKTFPSMEFSVSYTTRKPRKGEVNGRDYFFVDKETFES 65 Query: 62 FGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 E + + ++ ++ + AL +GK +L D +D+ A Q +++ Sbjct: 66 MIKEGDFLEWAEVYGNLYGTSKSQ-----VMKALEKGKDILLD--IDTQGALQVKKN--- 115 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 P+ +I LP KR++ R + E Sbjct: 116 ---------------FPEAVLIFILPPSLRELEKRLRKRGTDDEETIKKRL 151 >gi|312129039|ref|YP_003996379.1| deoxynucleoside kinase [Leadbetterella byssophila DSM 17132] gi|311905585|gb|ADQ16026.1| deoxynucleoside kinase [Leadbetterella byssophila DSM 17132] Length = 209 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 71/223 (31%), Gaps = 35/223 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT L ++V+ G L+ D+ + Sbjct: 3 IAITGNIGAGKTTLAEKLASHY---GWEVYYEAVDGNPY---------LAPFYDDMPLWS 50 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ-----GERDSSQHLFL 117 + F R + V + K ++ DR + D+ Q G + + Sbjct: 51 FHLQIFFLNTRFEQVLKIKE---RSDKTIIQDRTIYEDAYIFAQNLYESGHMNETDFTTY 107 Query: 118 DSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 SL ++ + PD I L + K ++ R E D ++ Sbjct: 108 KSLFNTIMRAISPPDLMIYLKADLPRLQKGIRKRGREYEQNI-------DPNYLLGLNEL 160 Query: 177 FLDIARNQPD-RCHIVDSAHSFQSVATNI-LNIVWELVQKRVS 217 + A+ + +D V + +L++K ++ Sbjct: 161 YSKFAQQYHHGKFLEIDVN-DLDFVENEADFRKITDLLEKNIN 202 >gi|312962398|ref|ZP_07776889.1| sulfate adenylyltransferase, large subunit [Pseudomonas fluorescens WH6] gi|311283325|gb|EFQ61915.1| sulfate adenylyltransferase, large subunit [Pseudomonas fluorescens WH6] Length = 723 Score = 44.2 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 20/97 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T + L+ L + + R +L Sbjct: 554 HKGKVIWFTGLSGSGKSTLANALELELHARGH-----------------RTYILDGDNVR 596 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 G + A R++++ V + + G I+L Sbjct: 597 QGLNRDLGFTDADRVENIRRIAEVAKLMMDAGLIVLT 633 >gi|150400248|ref|YP_001324015.1| signal recognition particle-docking protein FtsY [Methanococcus vannielii SB] gi|150012951|gb|ABR55403.1| signal recognition particle-docking protein FtsY [Methanococcus vannielii SB] Length = 400 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 44/126 (34%), Gaps = 15/126 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI G GKTT IS L L+ K Y + G T A A L G Sbjct: 200 GINGTGKTTSISKLGYILKEKGYSAVMAA--GDTFRAGAIEQ--LDEHGKNTGIRVIKHQ 255 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 A + + I A G ++L D R ++ +D +++ V+ Sbjct: 256 KGADSAAVIYDAIEHAKARGINVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 305 Query: 130 PDCTII 135 PD I Sbjct: 306 PDLVIF 311 >gi|326790689|ref|YP_004308510.1| deoxyadenosine kinase [Clostridium lentocellum DSM 5427] gi|326541453|gb|ADZ83312.1| Deoxyadenosine kinase [Clostridium lentocellum DSM 5427] Length = 217 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 33/231 (14%), Positives = 72/231 (31%), Gaps = 41/231 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + G+ G GKT+ LL +V + + + +E Sbjct: 1 MLLVVGGMIGLGKTSVAELLGEHF---GTEVFY-----ESVDNNPILPLFYTSSEEEIEK 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGER 109 + + LD I+ AL +L DR + S +Q Sbjct: 53 KRYPFLLQLHFLDTRFRSIKSALYHDNNVL-DRSIYEDWYFAKVNNDLGRISDLEFQMYD 111 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + L+E+ + PD I L + L R+ R E + + Sbjct: 112 RLLDN-MMQELKELPKKA--PDLMIYLKGSFETVLSRIMKRGRSYE------LDAQLEAY 162 Query: 170 HEKRRQIFLD--IARNQPDRCHIVDSAHSFQSVAT-----NILNIVWELVQ 213 + + + + + ++ ++D + V+ +L +V ++ Sbjct: 163 YRQLWEGYDEWVMSHYHASEVVVIDMDR-YDVVSRREDALEVLALVESKLK 212 >gi|65319853|ref|ZP_00392812.1| COG0572: Uridine kinase [Bacillus anthracis str. A2012] Length = 198 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 55/222 (24%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56 MN I+ + G GKTT L L ++ R T + Sbjct: 13 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 65 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + + + H+ IR + ++ I+ D +AY Sbjct: 66 --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 103 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 104 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHY 149 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 150 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 191 >gi|282860313|ref|ZP_06269382.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] gi|282586910|gb|EFB92146.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010] Length = 357 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 33/106 (31%), Gaps = 5/106 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V V E + ++ + Sbjct: 1 MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFVIPEVPTLFSQAGMDYLTSNHQFF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A A + I + I++CDR AY Sbjct: 58 FEGEKATLETQIALEDQFMR--IAETIDRPTIIVCDRGTMDISAYM 101 >gi|149180080|ref|ZP_01858585.1| hypothetical protein BSG1_03655 [Bacillus sp. SG-1] gi|148852272|gb|EDL66417.1| hypothetical protein BSG1_03655 [Bacillus sp. SG-1] Length = 183 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 39/79 (49%), Gaps = 2/79 (2%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189 D ++ +D P+D+ + R R +++ D E + + R+ +L++ + +PD Sbjct: 104 DVSVYIDTPLDVAMGRRILRDFSNDNSASDIQENIRL-YLDSGRRAYLEMEKTIKPDSDL 162 Query: 190 IVDSAHSFQSVATNILNIV 208 ++D + + +I+ I+ Sbjct: 163 VIDGTLPVERIVESIVEIL 181 >gi|29840294|ref|NP_829400.1| adenylate kinase [Chlamydophila caviae GPIC] gi|33301220|sp|Q822Z1|KAD_CHLCV RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|29834642|gb|AAP05278.1| adenylate kinase [Chlamydophila caviae GPIC] Length = 214 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 35/158 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHV 53 M + +F G G+GK T L L + P G+ AAE Sbjct: 1 MVNSIFYIIMGPPGSGKGTQSQRLANHLGLPHISSGDLFRSAIKSATPLGSKAAEYINKG 60 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 LL + E + +P G I+ G + Sbjct: 61 LLVPDNLVWEIVQETLN-------------KPGCKSGCII------------DGFPRTLD 95 Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQNR 150 L L + V+ D I LD+ + + R+ +R Sbjct: 96 QAVL--LNDFLVKSNAADYRVIQLDVSAEEIISRIHSR 131 >gi|302690798|ref|XP_003035078.1| hypothetical protein SCHCODRAFT_74381 [Schizophyllum commune H4-8] gi|300108774|gb|EFJ00176.1| hypothetical protein SCHCODRAFT_74381 [Schizophyllum commune H4-8] Length = 318 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 64/212 (30%), Gaps = 36/212 (16%) Query: 11 GIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G GAGK T + L + + G+ E + + + Sbjct: 88 GGPGAGKGTQCAKLVEEFGFCHLSAGDLLRAEQNREGSQYGELIKTCIKEGKIVPMEVTI 147 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + AA + E +GK RFL + + ++ + Sbjct: 148 KLLENAMGAAMKEAREGE---GWQDGKG----RFLIDGFPRKMDQALKFDESVCECS--- 197 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLD 179 + D ++ L+R+ R S R+ ++ +++ HE + Sbjct: 198 -------LVLFFDTTEEVMLERLLERGKTSGRDDDNVESIKKRFRTYHETTMPVIDHYKS 250 Query: 180 IARNQPDRCHIVDSAHSFQSV---ATNILNIV 208 + + +VDS+ V A + V Sbjct: 251 L-----GKVAVVDSSAPVDEVYKGAAEVARKV 277 >gi|159900921|ref|YP_001547168.1| adenylate kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159893960|gb|ABX07040.1| adenylate kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 223 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 74/240 (30%), Gaps = 62/240 (25%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQR-----KNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I F G GAGK+T + L L + T E G+ + V+ + Sbjct: 6 LILF-GPPGAGKSTQAAYL-DKLAAIDSISTGQRLRQTVE-TGSELGQEVAQVMAEGRLV 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + N + +L D + R SQ LD L Sbjct: 63 DDTLMNKLL-----------NEWLLGIPSEVGVLLDGY---------PRTLSQAQSLDQL 102 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-------------------- 160 + + + D I L L + ++R+ R R D Sbjct: 103 MQTISRPL--DVVIALTLSDEEAIRRLSGRRICRIKGQPDQILHINDQAALDACRANGGM 160 Query: 161 YFERKDV--MIHEKRRQIFLDIARNQP------DR--CHIVDSAHSFQSVATNILNIVWE 210 ER D ++R + A+ +P +R ++D+ + V+ I + + Sbjct: 161 LIERDDDKPETIKRRLAEYN--AKTEPLLQFYGERDLLILIDADGTPDQVSKAIEQALQQ 218 >gi|12045243|ref|NP_073054.1| uridine kinase [Mycoplasma genitalium G37] gi|255660407|ref|ZP_05405816.1| uridine kinase [Mycoplasma genitalium G37] gi|1351377|sp|P47622|URK_MYCGE RecName: Full=Uridine kinase; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase gi|3844971|gb|AAC71609.1| uridine kinase [Mycoplasma genitalium G37] gi|166078977|gb|ABY79595.1| uridine kinase [synthetic Mycoplasma genitalium JCVI-1.0] Length = 213 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 58/177 (32%), Gaps = 29/177 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ ++ G +GKTT ++ + L +K + ++ +L ++ Sbjct: 4 KGILVAISGGSCSGKTTVAEMIYQLLSKKLKVAIICQDNYYKSYKNKP--LLKRKTINFD 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDS 119 + A + + I L G I+ L D Y + + + Sbjct: 62 HPD-------AFDWKLLRSHIEDLL-NGSIVNVPLYD--------YINYTRAKKTAKIGP 105 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + ++ +MP D L R+ E+ + R+ ++ R I Sbjct: 106 IDVVILEGLMP----WFD----EKLSRLSKLKIFIETNGEERLIRRIERDWQRGRNI 154 >gi|241788753|ref|XP_002414466.1| cytoplasmic dynein heavy chain, putative [Ixodes scapularis] gi|215508677|gb|EEC18131.1| cytoplasmic dynein heavy chain, putative [Ixodes scapularis] Length = 260 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GKTT LL L+ VH P P R LL + Sbjct: 23 VVLVGPSGSGKTTLCRLLLHALRHAGEIVHTHILNPKAMP-----RQQLLGHIDVDTREW 77 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ A+AR VI+ L ++CD +++SL + Sbjct: 78 HDGVLTASAR-----QVIKEPLGVRSWIICD-------------GDIDPEWIESLNSV 117 >gi|172039504|ref|YP_001806005.1| guanylate kinase [Cyanothece sp. ATCC 51142] gi|171700958|gb|ACB53939.1| guanylate kinase [Cyanothece sp. ATCC 51142] Length = 189 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 56/175 (32%), Gaps = 26/175 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M SG I G G GK T + L + TR P + L Sbjct: 1 MASGKLIVLTGPSGVGKGTLVRALLNHHPELYLSISATTRSPRQGEVEGKDYYFLSKSAF 60 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E + + +A + + +G I+L L Sbjct: 61 ETMIEENQLLEWAEYAGNYYGTPRTKVEEKINQGLIVL--------------------LE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++ + +++ PD I LP + R+++R + ESA L +R + Sbjct: 101 IEVIGAKAIKNSFPDALRIFILPPSIEELEHRLRSRKTDSESAILRRLDRAKEEL 155 >gi|302878396|ref|YP_003846960.1| adenylylsulfate kinase [Gallionella capsiferriformans ES-2] gi|302581185|gb|ADL55196.1| adenylylsulfate kinase [Gallionella capsiferriformans ES-2] Length = 203 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 36/149 (24%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T ++ L +K R +L Sbjct: 28 HRGAIIWFTGLSGSGKSTLAHAVEEALHQKGC-----------------RTFVLDGDNVR 70 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G + A R++++ V + + G I+L S + Sbjct: 71 HGLCGDLGFSDAGRVENIRRVGEVAKLFMEAGIIVLT------------AFISPYRADRE 118 Query: 119 SLQEISVQEVMPDCT-IILDLPVDIGLKR 146 ++ + + D I D P+++ R Sbjct: 119 RVRSMVKEG---DFIEIYCDTPIEVCESR 144 >gi|120437753|ref|YP_863439.1| guanylate kinase [Gramella forsetii KT0803] gi|117579903|emb|CAL68372.1| guanylate kinase [Gramella forsetii KT0803] Length = 195 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 6/102 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M+ G I F G+GKTT + L + L+ +REP G + L Sbjct: 1 MSEGKLIVFSAPSGSGKTTIVRHLLKHQELKLDFSISATSREPRGNEVHGKDYYFLSLHD 60 Query: 59 VDEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96 + E + V+ +++ + +GK ++ D Sbjct: 61 FKQKIKNDEFLEWEEVYRDNFYGTLKSEVERIWKKGKHVIFD 102 >gi|326513906|dbj|BAJ92103.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 149 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 27/148 (18%) Query: 95 CDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 R A G SSQ + L++L + PD I+LD+P ++ ++RV R Sbjct: 8 ATRCSGKGLALDGYPRSSQAMALETL------GIRPDIFILLDVPDELLVERVVGRRLDP 61 Query: 155 ESACL--------------DYFERKDVMIHEKR-------RQIFLDIARNQPDRCHIVDS 193 E+ + ++ EK Q + D V Sbjct: 62 ETGKIYHLKYSPPENEEIASRLTQRFDDTEEKVKLRLQTHYQNIESLVSIYEDVIVKVKG 121 Query: 194 AHSFQSVATNILNIVWELVQKRVSPLSS 221 + + V I ++ + K+ ++S Sbjct: 122 DTTVEDVFGEIDKLLTSSLDKKTEMVAS 149 >gi|325860332|ref|ZP_08173454.1| deoxynucleoside kinase [Prevotella denticola CRIS 18C-A] gi|327313475|ref|YP_004328912.1| deoxynucleoside kinase [Prevotella denticola F0289] gi|325482211|gb|EGC85222.1| deoxynucleoside kinase [Prevotella denticola CRIS 18C-A] gi|326944956|gb|AEA20841.1| deoxynucleoside kinase [Prevotella denticola F0289] Length = 204 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 64/195 (32%), Gaps = 30/195 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GKTT ++L +R + + + + + Sbjct: 3 IAIAGNIGSGKTTLTTMLA---RRYGWKPRFESVDYNPYLEDYYKDI------KRWSFPM 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118 E D +E IR + ++ DR + ++YA D +++ Sbjct: 54 EVFFLKERFKDLLE--IRQSKES---VVQDRSIYEGVYVFTENNYAMGNLDDRDYETYME 108 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIF 177 ++++ PD I L V + ++ R E LDY E + E R + Sbjct: 109 LFEDMTDAVRFPDLMIYLRSSVSHLVSNIEKRGREYEQKMPLDYLESLNRRYDEFIRDKY 168 Query: 178 LDIARNQPDRCHIVD 192 R +D Sbjct: 169 -------KGRVLTID 176 >gi|260447974|gb|ACX38396.1| conserved hypothetical protein [Escherichia coli DH1] gi|315137581|dbj|BAJ44740.1| hypothetical protein ECDH1ME8569_2884 [Escherichia coli DH1] Length = 252 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 DY E +D + + K + + +DS + V V Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239 >gi|196038496|ref|ZP_03105805.1| conserved hypothetical protein [Bacillus cereus NVH0597-99] gi|196030904|gb|EDX69502.1| conserved hypothetical protein [Bacillus cereus NVH0597-99] Length = 192 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 31/143 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 5 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 54 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 109 Query: 116 FLDSLQEISVQEVMPDCTIILDL 138 L L+E D LD+ Sbjct: 110 ELYKLRE-----CRSDAIFYLDV 127 >gi|119484813|ref|ZP_01619295.1| adenylate kinase [Lyngbya sp. PCC 8106] gi|119457631|gb|EAW38755.1| adenylate kinase [Lyngbya sp. PCC 8106] Length = 193 Score = 44.2 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 44/217 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 + F G G+GK T + L FL + D+ T T + A+ + + Sbjct: 4 VIFLGPPGSGKGTQSARLSEFLAVPHISTGDILRTHVAQQTDLGQKAKAFM---DQGDLV 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCD---R------FLDSSYAYQGERDSSQH 114 + + RLD +P +G +L D R F++ Q S++ Sbjct: 61 PDQLILSMVQDRLD------QPDAQKG-WIL-DGFPRNVTQATFVEDLVKQQQVEKGSEN 112 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 SL TI L++P ++ ++R+ R +S + + HE+ Sbjct: 113 ADSKSLN-----------TINLEVPDEVLIERLLARGRADDSEETIR--HRLQVYHEQTE 159 Query: 175 ---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + D + IV+ V + N + Sbjct: 160 PLIEYYRDRNQLS-----IVNGNLPLDQVTAALKNAI 191 >gi|226357197|ref|YP_002786937.1| deoxyadenosine kinase [Deinococcus deserti VCD115] gi|226319187|gb|ACO47183.1| putative Deoxyadenosine kinase (Deoxynucleoside kinase complex I S-component) [Deinococcus deserti VCD115] Length = 207 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 22/166 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ G G+GK+T +L + P R V Sbjct: 1 MYLAISGNIGSGKSTLTRMLSDRYGLRPVYEPYADNPYLEDFYRDMRRYSFHSQVYFLSR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDS--- 119 E H+ V ++ DR F D++ + +S Q D Sbjct: 61 RLE---------QHLNTVTGARY-----VIQDRTVFEDANIFARNLFESGQMEQRDWDTY 106 Query: 120 --LQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L E + + PD I +D + KR+ R E D + Sbjct: 107 RGLYEGVLPALRVPDLLIHIDASLPTLKKRIAQRGRAYEQDIPDAY 152 >gi|126658008|ref|ZP_01729160.1| adenylate kinase [Cyanothece sp. CCY0110] gi|126620646|gb|EAZ91363.1| adenylate kinase [Cyanothece sp. CCY0110] Length = 186 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 49/221 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55 M++G + F G G+GK T L L N T E R + L Sbjct: 1 MSTGKGLIFLGPPGSGKGTQAQQLSEAL---NIPHIST--------GEMLREAIAKQTPL 49 Query: 56 SCGVDEFGAEAEA----IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + + E ++ +EN + + +L + + Sbjct: 50 GQKAQTYVDKGELVPDELLLG-----LIENRLNQEDAQQGWIL------DGFPRNVPQAE 98 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYFE--RKDV 167 L L + S Q + LD+P ++ + R ++ R E E R+ Sbjct: 99 FLDKLLHKLSKFSQQAIN------LDVPDEVIIDRLLLRGRKDDNEQTIRRRLEVYREKT 152 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + Q DR +D V T + +V Sbjct: 153 ---QPVLDYY-----RQHDRLSSIDGNRQLDKVTTTLKQVV 185 >gi|218560059|ref|YP_002392972.1| hypothetical protein ECS88_3366 [Escherichia coli S88] gi|218366828|emb|CAR04598.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli S88] gi|281180025|dbj|BAI56355.1| conserved hypothetical protein [Escherichia coli SE15] gi|294492195|gb|ADE90951.1| conserved hypothetical protein [Escherichia coli IHE3034] gi|307625412|gb|ADN69716.1| hypothetical protein UM146_01435 [Escherichia coli UM146] Length = 252 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISRFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|208434538|ref|YP_002266204.1| adenylate kinase [Helicobacter pylori G27] gi|238055697|sp|B5Z6Y9|KAD_HELPG RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|208432467|gb|ACI27338.1| adenylate kinase [Helicobacter pylori G27] Length = 191 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V + + R R D + + H + R +FL Sbjct: 105 AQNEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D +A + ++ S + + + + Sbjct: 151 DPLAEIQNFYKNKNVYKAINGERSIEEIVNEMQKYILSF 189 >gi|126466131|ref|YP_001041240.1| GTPase [Staphylothermus marinus F1] gi|126014954|gb|ABN70332.1| protein of unknown function, ATP binding [Staphylothermus marinus F1] Length = 261 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 12/100 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN-----------YDVHVTREPGGTPAAEAARHVL 54 +I G G+GKTT S L+ +L +V + +AR ++ Sbjct: 4 YIVVLGTAGSGKTTLASALQDYLINNGMDTAIVNLDPAVEVLPYKPDVDAREYVSARELM 63 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 + G+ GA A+ A R++ ++ + +L I+L Sbjct: 64 RTQGLGPNGALIAAVDMLALRIEELKEEVW-SLKSNYIIL 102 >gi|119719417|ref|YP_919912.1| GTP-binding signal recognition particle [Thermofilum pendens Hrk 5] gi|119524537|gb|ABL77909.1| signal recognition particle subunit FFH/SRP54 (srp54) [Thermofilum pendens Hrk 5] Length = 431 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 18/132 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFG 63 +F+ G+EG+GKTT ++ + + +RK Y V V P A E R + GV +G Sbjct: 103 MFV---GLEGSGKTTTVAKVANYYKRKGYRVGVVAADTYRPGAYEQLRSLAEKVGVPFYG 159 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E + + AL G +L D+ + R + ++ ++ + Sbjct: 160 DPQE------------RDAVSLAL-RGVKVLSDKGIQMILIDTAGRHKDEEALMEEVKTL 206 Query: 124 SVQEVMPDCTII 135 +EV PD ++ Sbjct: 207 Y-REVKPDAVVL 217 >gi|300905889|ref|ZP_07123622.1| hypothetical protein HMPREF9536_03881 [Escherichia coli MS 84-1] gi|301304166|ref|ZP_07210282.1| hypothetical protein HMPREF9347_02766 [Escherichia coli MS 124-1] gi|307310381|ref|ZP_07590029.1| protein with nucleoside triphosphate hydrolase domain protein [Escherichia coli W] gi|300402358|gb|EFJ85896.1| hypothetical protein HMPREF9536_03881 [Escherichia coli MS 84-1] gi|300840579|gb|EFK68339.1| hypothetical protein HMPREF9347_02766 [Escherichia coli MS 124-1] gi|306909276|gb|EFN39771.1| protein with nucleoside triphosphate hydrolase domain protein [Escherichia coli W] gi|315062303|gb|ADT76630.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli W] gi|315256883|gb|EFU36851.1| conserved hypothetical protein [Escherichia coli MS 85-1] gi|320201898|gb|EFW76473.1| hypothetical protein ECoL_00523 [Escherichia coli EC4100B] gi|323377112|gb|ADX49380.1| hypothetical protein EKO11_0729 [Escherichia coli KO11] Length = 252 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 78/237 (32%), Gaps = 54/237 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 DY E +D + + K + + +DS + V V Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239 >gi|256810897|ref|YP_003128266.1| cytidylate kinase [Methanocaldococcus fervens AG86] gi|256794097|gb|ACV24766.1| cytidylate kinase [Methanocaldococcus fervens AG86] Length = 178 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 38/92 (41%), Gaps = 1/92 (1%) Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + V PD TI P+++ +R+ R ++ + L ++ ++ ++I+ Sbjct: 85 WMLLKNGVKPDLTIWFKAPLEVRAERISKRENIDKEEALKKMVERECSEKKRYKEIYNID 144 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211 + I+DS+ + V + + + L Sbjct: 145 LDDLSIYDLIIDSSKWDVEGVFNIVSSAIDNL 176 >gi|198425292|ref|XP_002120295.1| PREDICTED: similar to retinol dehydrogenase 10 isoform 1 [Ciona intestinalis] Length = 324 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 27/164 (16%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62 + F G G+GK+T + LL K F + V H TR+P H +++ Sbjct: 6 VVFSGPSGSGKSTLLGLLFKEFPNEFGFSVSHTTRQPRPGEVGGKHYHFTTVEEMEKEIH 65 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G E F+ + ++ L KI L D + S++ Sbjct: 66 RGNFIEHAKFSNNMYGTSKQAVQDVLKNNKICLLD---------------IDEQGVKSIK 110 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + ++ P C I P L+ +QNR + R + + ER+ Sbjct: 111 KT---DLDPLCVFI--APP--SLETLQNRLNERGTETAESIERR 147 >gi|198425290|ref|XP_002120364.1| PREDICTED: similar to retinol dehydrogenase 10 isoform 2 [Ciona intestinalis] Length = 496 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 36/164 (21%), Positives = 61/164 (37%), Gaps = 27/164 (16%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62 + F G G+GK+T + LL K F + V H TR+P H +++ Sbjct: 6 VVFSGPSGSGKSTLLGLLFKEFPNEFGFSVSHTTRQPRPGEVGGKHYHFTTVEEMEKEIH 65 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G E F+ + ++ L KI L D + S++ Sbjct: 66 RGNFIEHAKFSNNMYGTSKQAVQDVLKNNKICLLD---------------IDEQGVKSIK 110 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + ++ P C I P L+ +QNR + R + + ER+ Sbjct: 111 KT---DLDPLCVFI--APP--SLETLQNRLNERGTETAESIERR 147 >gi|311263819|ref|XP_003129863.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Sus scrofa] Length = 3502 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P RH LL + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVNSWIICD-------------GDIDPEWIESLNSV 2069 >gi|2564695|gb|AAB81841.1| cytoplasmic dynein heavy chain 1b [Tetrahymena thermophila] Length = 1304 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G GKTT LK+ ++ V P P R LL ++ Sbjct: 531 VVLVGPSGCGKTTIWKTLKKAYEKMGTQVKAYVMNPKSMP-----RSQLLGLMNNDTREF 585 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ ++AR VI+ + ++CD +++SL + Sbjct: 586 TEGVLTSSAR-----EVIKESSDVISWIICD-------------GDIDPEWIESLNSV 625 >gi|73541220|ref|YP_295740.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Ralstonia eutropha JMP134] gi|72118633|gb|AAZ60896.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Ralstonia eutropha JMP134] Length = 651 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 53/173 (30%), Gaps = 58/173 (33%) Query: 7 IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G+ GAGK+T +L+++ L + + LL G Sbjct: 471 IVWFTGLSGAGKSTIANLVEKRLHALGHHTY-----------------LLDGDNVRHGLN 513 Query: 66 AEAIVFAAARLD---HVENVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQH 114 + A R++ V V R L G ++L +R A D Sbjct: 514 KDLGFSEADRVENIRRVAEVARLMLDAGLVVLVSFISPFRSER----EMARALAGDGEFA 569 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDI-------GLKRVQNRYSLRESACLD 160 + +D P+D+ GL R R L+ +D Sbjct: 570 E------------------VFIDTPLDVAELRDPKGLYRKARRGELKNFTGID 604 >gi|300867700|ref|ZP_07112345.1| putative adenylate kinase 2 [Oscillatoria sp. PCC 6506] gi|300334283|emb|CBN57517.1| putative adenylate kinase 2 [Oscillatoria sp. PCC 6506] Length = 185 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 61/214 (28%), Gaps = 49/214 (22%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL--------LSCGV 59 G GAGK T LL +L T + R + L+ Sbjct: 4 VILGGPGAGKGTQTELLCSYLS---IPCIST--------GDILREAIASQTNLGRLAEPY 52 Query: 60 DEFGA--EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E G E ++ + + +V + L++G A+Q E Sbjct: 53 VEKGDLVRDETMIEFIRQRLLLPDVTKGWLLDG---------YPRTAFQAEELDFLVDEF 103 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RR 174 + + I L++P + + R R + + +R+ + ++ Sbjct: 104 GQKVDWA---------IYLNVPDAVLMSRSLGRSRADDQ--PEIVQRRIELFRDRTIPIL 152 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + V + IL + Sbjct: 153 EYY-----EHRQKLLTVSGNQPPDQIHQEILKKL 181 >gi|71419648|ref|XP_811232.1| adenylate kinase [Trypanosoma cruzi strain CL Brener] gi|70875872|gb|EAN89381.1| adenylate kinase, putative [Trypanosoma cruzi] Length = 260 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 57/221 (25%), Gaps = 48/221 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G GAGK T + + DV T E + + +E Sbjct: 58 GPSGAGKRTQSRRIAQKYGAVVVNADDVFREEMSKDTKEGEKVANCMRDGIPVPHDVASE 117 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 I + + +L + ++L + Sbjct: 118 LI---------IRRLKMEDANSKGWVL---------------NGFPRTRSEAL-RLQTAG 152 Query: 128 VMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY-FERKDVMIHEK 172 + P I+LD+P ++ ++R R + ++ FE D + Sbjct: 153 ISPLFFILLDVPYEVAVQRCNGRRYDPITQNVYHMEFCPPPQGMAVERMFEDDDSLAAVV 212 Query: 173 RRQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 R + ++ +D V+ I V Sbjct: 213 SRWKYFDARKDELIECYEPVFVRIDGNRPLDVVSQEIFEQV 253 >gi|312375502|gb|EFR22864.1| hypothetical protein AND_14094 [Anopheles darlingi] Length = 232 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 59/174 (33%), Gaps = 15/174 (8%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVD 60 F F EG G+GKTT + ++F DV + EP ++L Sbjct: 46 FTVFVEGNIGSGKTTFLDHFQQF-----DDVCLLTEPVEKWRNCGGVNLLDLMYKEAYRW 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLD 118 + + H +P + + L R F++S A ++ + Sbjct: 101 AMPFQTYVTLTMLDM--HTSKTDKPVKLMERSLFSARNCFVESMLASGSLHRGMYNVLQE 158 Query: 119 SLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 + I + D + L ++ R+Q R ES + ++ +HE Sbjct: 159 WYEFICCNIHIQADLIVYLQTSPEVVYDRMQKRARSEESCVPLEYLKELHELHE 212 >gi|307165868|gb|EFN60223.1| Probable adenylate kinase isoenzyme F38B2.4 [Camponotus floridanus] Length = 189 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 64/210 (30%), Gaps = 37/210 (17%) Query: 11 GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G GK T + L + D+ G+ + + ++ E Sbjct: 8 GGPGCGKGTQCDRMIEKYGLLHLSSGDLLRAEVASGSERGASLQDLMSKGLFVPTDIVLE 67 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 ++ + A EG + + G L Q Sbjct: 68 L----------IKEKMEKARAEGV-------TKTGFLIDGYPREKDQGILFE------QN 104 Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIAR 182 V P D + D+ + KR+ R ++ + A + +KR +IF +I Sbjct: 105 VCPVDLILFFDVANETLKKRLLGRAAVSQRADDN------EETIKKRIEIFNTKNNEIVE 158 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + D+ +++ + + + + L+ Sbjct: 159 HYKDKVVRINAEGTVDEIFAEVTKALDALL 188 >gi|303235611|ref|ZP_07322218.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella disiens FB035-09AN] gi|302484058|gb|EFL47046.1| putative deoxyadenosine/deoxycytidine kinase [Prevotella disiens FB035-09AN] Length = 204 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 38/198 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGAE 65 I+ G G+GKTT ++L + G P E+ + L + Sbjct: 3 IAIAGNIGSGKTTLTTMLAKR-------------YGWVPRYESVDYNPYLDDYYKDIKRW 49 Query: 66 AEAIVFAAARLDHVENVIRPALM---EGKILLCDR--------FLDSSYAYQGERDSSQH 114 + A + ++ + L EGK ++ DR F ++YA + Sbjct: 50 S-----FAMEIFFLKERFKDLLEISKEGKDVIQDRTIYEGVYVFTANNYAMGNLDNRDYE 104 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKR 173 +++ ++++ PD + L V + ++ R E +DY E KR Sbjct: 105 TYMELFEDMTDAVRYPDLMLYLKSSVSHLVANIEKRGRNYEQRMPIDYLEN-----INKR 159 Query: 174 RQIFLDIARNQPDRCHIV 191 F++ R + Sbjct: 160 YDDFIE--NQYKGRVLTI 175 >gi|169629926|ref|YP_001703575.1| shikimate kinase [Mycobacterium abscessus ATCC 19977] gi|169241893|emb|CAM62921.1| Shikimate kinase (AroK) [Mycobacterium abscessus] Length = 216 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 44/201 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T L + L +V+ T T A + + G EF Sbjct: 9 GLPGSGKSTIGRRLAKAL---GVNVYDTDTGIETEAGRTIAQIFANDGEPEF-------- 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R++ E+VIR AL + ++ G ++L + Sbjct: 58 ---RRIE--ESVIRQALDQQDGVVS----------LGGGAVLTPGVREALAGHT------ 96 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA--RNQPDRC 188 + L++ G++R A D E+ ++ ++ ++ ++A + DR Sbjct: 97 --VVYLEISAAEGIRRTGGSVVRPLLAGPDRAEKYHALMSQRVP-LYREVATIKVNTDR- 152 Query: 189 HIVDSAHSFQSVATNILNIVW 209 + +V I++ + Sbjct: 153 ------RNPGAVVRMIVSRLE 167 >gi|116754856|ref|YP_843974.1| signal recognition particle-docking protein FtsY [Methanosaeta thermophila PT] gi|116666307|gb|ABK15334.1| signal recognition particle-docking protein FtsY [Methanosaeta thermophila PT] Length = 379 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ + R+L+ + Y V + G T A A L + Sbjct: 186 ILFVGVNGTGKTTSIAKVARYLKERGYSVVLAA--GDTFRAGAIEQ--LETHGQRLDLKV 241 Query: 67 EAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + I A K ++L D R + +D +++I Sbjct: 242 IKHKTGGDPAAVIFDAIEYAKAHKKDVVLAD---------TAGRLHTNINLMDQMKKIV- 291 Query: 126 QEVMPDCTIILD 137 + PD I +D Sbjct: 292 RVTKPDMLIFVD 303 >gi|317010838|gb|ADU84585.1| adenylate kinase [Helicobacter pylori SouthAfrica7] Length = 191 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT ++ + N G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTD----AEWIAKNNSATIAHFSTGDLLRAESAKKTDRGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ ++L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGVILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ K + R R D +V+ H + R +FL Sbjct: 105 AQSEVVLKSV---------IEVEVSEKTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + I + Sbjct: 151 DPLMEIQNFYKAKKVYKTINGERSIEEIVHEIQEYILSF 189 >gi|284032265|ref|YP_003382196.1| Shikimate kinase [Kribbella flavida DSM 17836] gi|283811558|gb|ADB33397.1| Shikimate kinase [Kribbella flavida DSM 17836] Length = 167 Score = 44.2 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 68/206 (33%), Gaps = 41/206 (19%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG + G G+GK+T +LL L + + D E T A + + + G F Sbjct: 2 SGPVVVLVGPPGSGKSTVAALLAAKLGKLHRDTDTDVE---TTAGKPISDIFVDSGEPAF 58 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A A + AA L +G +L G L Sbjct: 59 RALERAAIVAA-------------LQDGDAVLS----------VGGGAILDADTRSDLSG 95 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + LD+ V KRV + + K++M + RR ++ ++A+ Sbjct: 96 HT--------VVYLDVSVGEAAKRVGLGVARPLLLGNVRTQLKNLM--DARRPLYAEVAK 145 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 D + + +A I + Sbjct: 146 L----TVTTDG-RTPEEIADEIAEQL 166 >gi|49185387|ref|YP_028639.1| hypothetical protein BAS2379 [Bacillus anthracis str. Sterne] gi|49179314|gb|AAT54690.1| hypothetical protein BAS2379 [Bacillus anthracis str. Sterne] Length = 202 Score = 44.2 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 55/222 (24%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56 MN I+ + G GKTT L L ++ R T + Sbjct: 17 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 69 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + + + H+ IR + ++ I+ D +AY Sbjct: 70 --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 107 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 108 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHY 153 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 154 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 195 >gi|148234660|ref|NP_001089688.1| hypothetical protein LOC734750 [Xenopus laevis] gi|76779505|gb|AAI06339.1| MGC130873 protein [Xenopus laevis] Length = 364 Score = 44.2 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 12/102 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVL 54 I G+ G+GKTT + L +L KN VH P + + V+ Sbjct: 12 LIVL-GMAGSGKTTLVQRLTAYLHGKNSPPYVINLDPAVHEIPFPANIDIRDTVNYKEVM 70 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G ++ A R D V I + ++ D Sbjct: 71 KQYSLGPNGGIVTSLNLFATRFDQVVKFIEKRQKNCRYVVMD 112 >gi|323941914|gb|EGB38093.1| gyghR [Escherichia coli E482] Length = 250 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 56/237 (23%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D+ E +D + + K + + +DS + V V Sbjct: 194 -----KPDHDELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 237 >gi|154339970|ref|XP_001565942.1| dynein heavy chain [Leishmania braziliensis MHOM/BR/75/M2904] gi|134063260|emb|CAM45464.1| putative dynein heavy chain [Leishmania braziliensis MHOM/BR/75/M2904] Length = 4469 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T +S+L++ LQ N V P P R LL + Sbjct: 2121 VVLVGPSGSGKSTLLSILRKALQTMNITVPMHVMNPKAMP-----RRRLLGYMDADTREW 2175 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR +V++ + +LCD +++SL + Sbjct: 2176 YDGVLTVAAR-----DVVKQSKEARPWVLCD-------------GDIDPEWIESLNSV 2215 >gi|62859917|ref|NP_001016888.1| thymidine kinase 2, mitochondrial [Xenopus (Silurana) tropicalis] gi|89272873|emb|CAJ82140.1| thymidine kinase 2, mitochondrial [Xenopus (Silurana) tropicalis] gi|156230705|gb|AAI52033.1| thymidine kinase 2, mitochondrial [Xenopus (Silurana) tropicalis] Length = 274 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 30/233 (12%), Positives = 64/233 (27%), Gaps = 53/233 (22%) Query: 1 MNSGLF-----------------ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREP 41 M+ G+F I EG +GKT+ + L+ V R Sbjct: 46 MHGGMFSSGSAGNGLKHREKSTLICVEGNIASGKTSCLDFFSNTADLEVYKEPVAKWRNV 105 Query: 42 -GGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 G P + + + H + I P + + +R + Sbjct: 106 RGHNPLGL----MYQDPNKWGLTLQTYVQLTMLD--IHTKPSISP------VKMMERSIY 153 Query: 101 SSY------AYQGERDSSQHLFL--DSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRY 151 S+ YQ + + + + I + D + L + +R++ R Sbjct: 154 SAKYIFVENLYQSGKMPEVDYAILTEWFEWIVKNTDTSVDLIVYLQTSPETCYQRLKKRC 213 Query: 152 SLRESACLDYFERKDVMIHEKRRQIFLD-IARNQ----PDRCHIVDSAHSFQS 199 E + ++ D + + P ++D+ + Sbjct: 214 REEERVIP-------LEYLYAIHNLYEDWLVKQTSFPVPAPVLVIDANKELEE 259 >gi|269139148|ref|YP_003295849.1| hemin transport system ATP-binding protein [Edwardsiella tarda EIB202] gi|267984809|gb|ACY84638.1| hemin transport system ATP-binding protein [Edwardsiella tarda EIB202] gi|304559072|gb|ADM41736.1| ABC-type hemin transport system, ATPase component [Edwardsiella tarda FL6-60] Length = 260 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 31/211 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFG 63 + G GAGK+T + LL +L+ + ++ PA + A R ++ Sbjct: 34 LVVIIGPNGAGKSTLMRLLAGYLRPDSGRCTLLGKDLAAWPAQQLAQRRAVMRQHSALAF 93 Query: 64 AEAEAIVFAAARL-------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + V A R ++ V++ G + L DR + + + Sbjct: 94 PFSVREVIAMGRAPCPEGQQQALQAVMQ---QSGCLALADRDYRTL----SGGEQQRVQL 146 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM--IHEKRR 174 +L ++ P + LD L ++ LR + E V +H+ Sbjct: 147 ARALAQLWHPNPQP-RWLFLD-EPTSALDLFHQQHLLRLLHGMTRCEPLSVCCILHD--- 201 Query: 175 QIFLDIARNQPDRCHIVD-----SAHSFQSV 200 L++A DR ++ ++ + + V Sbjct: 202 ---LNLAALYADRILLLHQGALVASGTPEQV 229 >gi|242398956|ref|YP_002994380.1| Putative adenylate kinase [Thermococcus sibiricus MM 739] gi|242265349|gb|ACS90031.1| Putative adenylate kinase [Thermococcus sibiricus MM 739] Length = 190 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 74/220 (33%), Gaps = 57/220 (25%) Query: 1 MNSG--LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G + I+ G G GKTT LL + YD RE L Sbjct: 1 MVGGEKMLIAVSGTPGVGKTTVAKLLAE---KMGYDYVDLRE-----------FALKHRI 46 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + G E E D + ++ L +L + S + +D Sbjct: 47 GEIRGDELEIEF------DKLAYYVKEKLKNRNTVL-------------DGHLSHLMPVD 87 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + IIL + +R++ R +E + E + V + L Sbjct: 88 QI-------------IILRAHPKLIGERLKERGYTKEKISEN-VEAELVDV------CLL 127 Query: 179 DIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 + A ++ + VD+ + + V IL+++ +++++ Sbjct: 128 E-ALDENEAIIEVDTTNKTPEEVVNEILSLLERGIKRKIG 166 >gi|189195660|ref|XP_001934168.1| guanylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187980047|gb|EDU46673.1| guanylate kinase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 206 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 62/172 (36%), Gaps = 29/172 (16%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G GAGK+T +S L + + + + + H TR P GT + + + Sbjct: 20 IVISGPSGAGKSTILSRLFEEYPGKFGFSISHTTRGPRGTEQNGKEYYFVTKEEFQDLIE 79 Query: 65 E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E F + +G+I + D + ++ ++ Sbjct: 80 KKGFVEHAQFGGNYYGTSVKAVNDIAEKGQICILD------------------IEMEGVK 121 Query: 122 EISVQ--EVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 +++ P + P +I KR+++R + +E A L + V + Sbjct: 122 QVANHPTFPRPR--FLFLQPPSMEILEKRLRSRATDKEEAILKRLNQAKVEM 171 >gi|156377987|ref|XP_001630926.1| predicted protein [Nematostella vectensis] gi|156217957|gb|EDO38863.1| predicted protein [Nematostella vectensis] Length = 196 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 12/92 (13%) Query: 131 DCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLDIARNQP 185 D + L+ ++ +R+ R R ++ +++ V EK + + ++ Sbjct: 105 DFVLYLECTEEVMQERLLKRAETSGRPDDNIETIKKRFVTFLEKTVPVVEHYEKQSKA-- 162 Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL--VQKR 215 H +D++ + V I ++ EL +++R Sbjct: 163 ---HRIDASRPLEEVYNAISSLFAELPKLERR 191 >gi|91212398|ref|YP_542384.1| hypothetical protein UTI89_C3406 [Escherichia coli UTI89] gi|117625290|ref|YP_854462.1| hypothetical protein APECO1_3437 [Escherichia coli APEC O1] gi|191172571|ref|ZP_03034111.1| conserved hypothetical protein [Escherichia coli F11] gi|237706269|ref|ZP_04536750.1| ATP-binding protein YghR [Escherichia sp. 3_2_53FAA] gi|300973442|ref|ZP_07172198.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|300993123|ref|ZP_07180209.1| hypothetical protein HMPREF9553_04263 [Escherichia coli MS 200-1] gi|301048201|ref|ZP_07195237.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|331659266|ref|ZP_08360208.1| hypothetical ATP-binding protein YghR [Escherichia coli TA206] gi|91073972|gb|ABE08853.1| hypothetical protein UTI89_C3406 [Escherichia coli UTI89] gi|115514414|gb|ABJ02489.1| conserved hypothetical protein [Escherichia coli APEC O1] gi|190907239|gb|EDV66838.1| conserved hypothetical protein [Escherichia coli F11] gi|226899309|gb|EEH85568.1| ATP-binding protein YghR [Escherichia sp. 3_2_53FAA] gi|300299959|gb|EFJ56344.1| conserved hypothetical protein [Escherichia coli MS 185-1] gi|300305138|gb|EFJ59658.1| hypothetical protein HMPREF9553_04263 [Escherichia coli MS 200-1] gi|300410784|gb|EFJ94322.1| conserved hypothetical protein [Escherichia coli MS 45-1] gi|315288783|gb|EFU48181.1| conserved hypothetical protein [Escherichia coli MS 110-3] gi|315291264|gb|EFU50624.1| conserved hypothetical protein [Escherichia coli MS 153-1] gi|323951493|gb|EGB47368.1| ATP-binding protein YghR [Escherichia coli H252] gi|323957865|gb|EGB53579.1| ATP-binding protein YghR [Escherichia coli H263] gi|324011921|gb|EGB81140.1| hypothetical protein HMPREF9533_04079 [Escherichia coli MS 60-1] gi|331053848|gb|EGI25877.1| hypothetical ATP-binding protein YghR [Escherichia coli TA206] Length = 256 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 63/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 27 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 87 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + + ++ +E P+ I L + +D + R Sbjct: 146 YYDGPGIGVERATGKISRFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 197 >gi|300931868|ref|ZP_07147165.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300460291|gb|EFK23784.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 252 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 34/173 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYSFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQE----------VMPDCTIILDLPVDIGLKR 146 Y G + + + Q P+ I L + +D + R Sbjct: 142 YYDGPGIGVERAT-GKINQFLAQRERQLYQQMAQYRPELIIRLGIDIDTAISR 193 >gi|223995257|ref|XP_002287312.1| signal recognition particle 54 kDA subunit [Thalassiosira pseudonana CCMP1335] gi|220976428|gb|EED94755.1| signal recognition particle 54 kDA subunit [Thalassiosira pseudonana CCMP1335] Length = 486 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 16/140 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G++GAGKTT L L ++N V + PAA +L + G E Sbjct: 111 ILLAGLQGAGKTTAAGKLAFRLPKRNRKVLLVAADVYRPAAIEQLQIL----GKQIGVEV 166 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 ++ A D + + A EG ++ D R ++ L+ Sbjct: 167 FSMGVDADPADIAKEAVEKAKREGFDTVVVD---------TAGRQVVDEELMEELRR-VK 216 Query: 126 QEVMPDCTIILDLPVDIGLK 145 + V PD T+++ + G Sbjct: 217 KTVEPDETLLV-VDAMTGQA 235 >gi|253744978|gb|EET01103.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative [Giardia intestinalis ATCC 50581] Length = 215 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 53/152 (34%), Gaps = 21/152 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG AGK+T L T P E L ++G + Sbjct: 9 FI-LEGNIAAGKSTLAGKLAEMY---GLT-LFTEPVEENPYLE-----LFYEDPKKWGYQ 58 Query: 66 AEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ------GERDSSQHLFLD 118 + F RL+ + ++ + +G +L DR + S + G + + Sbjct: 59 MQTWFFN-QRLNTYKEAVQASKTVKG--VLLDRSVFSDLVFALNSYEDGFISDADFKLYN 115 Query: 119 SLQEISVQEV-MPDCTIILDLPVDIGLKRVQN 149 + ++ + +P + LD+ + R+ N Sbjct: 116 EQYQAQLKGLPLPTVILYLDVTPETCYYRIHN 147 >gi|14521347|ref|NP_126823.1| putative kinase [Pyrococcus abyssi GE5] gi|46397298|sp|Q9UZK4|KAD6_PYRAB RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|5458565|emb|CAB50053.1| Nucleotide kinase (related to CMP and AMP kinases) [Pyrococcus abyssi GE5] Length = 180 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 71/216 (32%), Gaps = 59/216 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-VDEFG 63 + I+ G G GKTT LL L Y+ R L G E Sbjct: 1 MLIAITGTPGVGKTTIAKLLAEKL---GYEYV------------NLRDFALEKGCGREVD 45 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E E +D + + L + ++L D ++ Sbjct: 46 GEVEV------EIDELAYFVEKELKDRNVVL-----DGHLSH------------------ 76 Query: 124 SVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 +MP D ++L I +R++ R +E + E + V L A Sbjct: 77 ----LMPVDLVVVLRAHPRIIGERLRERGYSKEKIGEN-VEAELVD-------AILIEAI 124 Query: 183 NQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVS 217 ++ + VD+ + + + I+ ++ V++RV Sbjct: 125 DEHENVIEVDTTNKTPEEIVEEIIGLIKSGVKRRVG 160 >gi|220931824|ref|YP_002508732.1| Guanylate kinase [Halothermothrix orenii H 168] gi|219993134|gb|ACL69737.1| Guanylate kinase [Halothermothrix orenii H 168] Length = 194 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 55/177 (31%), Gaps = 26/177 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G G G GK T + L + Y V TR+P L Sbjct: 1 MGKGKLFVLSGPSGVGKGTVLDKLLSDFKDVQYSVSATTRKPRPGEKDGVDYFFLSREKF 60 Query: 60 DEFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E I +A ++ + L EGK ++ + QG R Sbjct: 61 FKMVENNEFIEWAEVHNNYYGTPKIFVDKCLAEGKDVILE------IDIQGARQ------ 108 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 V+++ PD I +P + +R+ +R S E + + E Sbjct: 109 --------VKKLYPDAIFIFLVPPSLNELKRRLNHRGSEDEKNMKIRLNNAEDELKE 157 >gi|62088460|dbj|BAD92677.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor variant [Homo sapiens] Length = 241 Score = 43.9 bits (103), Expect = 0.015, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDS 111 D ++ ++++ RL + + L G+ ++ +R + S + + QG Sbjct: 128 SNDGNSYRLQSWLYSS-RLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAMYNQGFIRK 186 Query: 112 SQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSL 153 + ++ +++ + + P I +D+PV +R+Q + + Sbjct: 187 QCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDV 229 >gi|317124721|ref|YP_004098833.1| shikimate kinase [Intrasporangium calvum DSM 43043] gi|315588809|gb|ADU48106.1| shikimate kinase [Intrasporangium calvum DSM 43043] Length = 174 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 62/203 (30%), Gaps = 49/203 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGKTT L L +H T A + + + G F A Sbjct: 13 GPPGAGKTTVGRALASRL---GVPLHDTDAAIEQAAGRSISDIFVDDGEPAFRDLERA-- 67 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 V R E I+ +D L E ++ Sbjct: 68 ----------EVARALTEEPGIV----------------ALGGGAVMDPLTEAALAG--- 98 Query: 131 DCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 + LD+ + KRV ++R L + + V + RR + +A Sbjct: 99 HIVVFLDVGIADASKRVGFDRSRPLLSVNPRASW-----VAMMNARRATYERVAG----- 148 Query: 188 CHIVD-SAHSFQSVATNILNIVW 209 H VD + + + VA I ++ Sbjct: 149 -HRVDTAGRTPEDVAAEIAALLE 170 >gi|269791948|ref|YP_003316852.1| hypothetical protein Taci_0333 [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099583|gb|ACZ18570.1| protein of unknown function DUF344 [Thermanaerovibrio acidaminovorans DSM 6589] Length = 486 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 41/156 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG++ AGK I L + L + Y V T P Sbjct: 293 IVFEGMDAAGKGGCIKRLTQNLDPRGYQVVPTSAPNDWE--------------------- 331 Query: 67 EAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQG-ERDSSQHLFLDSL---- 120 R H + +G + + DR + E S+ + + Sbjct: 332 --------RAHHYLWRFWESFPKGGHVGIYDRSWYGRVLVERIEGFCSEEEWRRAFGEIN 383 Query: 121 ---QEISVQEVMPDCT-IILDLPVDIGLKRVQNRYS 152 ++ + + L + D LKR + R Sbjct: 384 EMERQWADFGAI--IVKFWLHVTPDEQLKRFKERQE 417 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52 I FEG +GAGK T ++ L + L + ++VH + P R Sbjct: 43 IVFEGWDGAGKGTLMNELIQALDPRGFEVHNVK-PDQERLWPPMRR 87 >gi|327438673|dbj|BAK15038.1| uncharacterized conserved protein [Solibacillus silvestris StLB046] Length = 280 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 40/241 (16%), Positives = 75/241 (31%), Gaps = 62/241 (25%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL I+FEG++ AGK I L + + V P + + E Sbjct: 42 GLIIAFEGMDAAGKGGAIKRLTERIDPRGLMV--------WPIS--------APQPHEM- 84 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 R +++ R G+I + DR + E + + + + +E Sbjct: 85 -----------RYHYMQRFWRKLPQHGQIAIFDRSWYGRVLVERIEGFAEEAEWKRAYEE 133 Query: 123 ISVQEVMPDCT--------IILDLPVDIGLKRVQNRY---------SLRESACLDYFE-- 163 I+ E T + + D LKR R + + D F+ Sbjct: 134 INSFEKQ--LTDEDYIMIKFWIHIDSDEQLKRFNERAADPYKSWKLTAEDWRNRDKFDLY 191 Query: 164 -RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH---SFQSVATNILNIVWELVQKRVSPL 219 + EK ++ H++ + V ++ + + V KR L Sbjct: 192 CEAADEMFEKT--------DSENAPWHLIPGNDKNYARVQVLKEVVTHIEKEVTKRGLKL 243 Query: 220 S 220 + Sbjct: 244 T 244 >gi|260468533|ref|ZP_05813700.1| adenylate kinase [Mesorhizobium opportunistum WSM2075] gi|259028689|gb|EEW29998.1| adenylate kinase [Mesorhizobium opportunistum WSM2075] Length = 202 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 31/203 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T L + T + R + + E G A+A++ Sbjct: 7 GPPGAGKGTQAQRLVE---KHGIPQLST--------GDMLRAAVQAG--TEVGKRAKAVM 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE-ISVQE 127 + V + I A ++ +R ++ A D + D++++ ++ + Sbjct: 54 ---DAGELVSDAIVNA------IVAERIDQANCAKGFILDGYPRTLVQADAVEQMLAERG 104 Query: 128 VMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN--- 183 + D I L + + R+ R + + + + E+ R+ + A Sbjct: 105 IGLDTVIELVVDDRALVGRIVKRAEDAKAAGQPVRKDDNPAVFEERLREYYKKTAPLTGY 164 Query: 184 --QPDRCHIVDSAHSFQSVATNI 204 R VD S +V I Sbjct: 165 YYAKGRLKTVDGMASIDAVTAEI 187 >gi|317177551|dbj|BAJ55340.1| adenylate kinase [Helicobacter pylori F16] Length = 191 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSMEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D +V+ H + R +FL Sbjct: 105 AQNEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189 >gi|322827694|gb|EFZ31758.1| hypothetical protein TCSYLVIO_1919 [Trypanosoma cruzi] Length = 335 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 58/221 (26%), Gaps = 48/221 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G GAGK T + + DV T E + + +E Sbjct: 133 GPSGAGKRTQSRRIAQKYGAVVVNADDVFREEMSKETKEGEKVANCMREGIPVPHDVASE 192 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 I + + +L + ++L + Sbjct: 193 LI---------IRRLKMEDASSNGWVL---------------NGFPRTRSEAL-RLQTAG 227 Query: 128 VMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY-FERKDVMIHEK 172 + P I+LDLP ++ ++R R E ++ FE D + Sbjct: 228 ISPLFFILLDLPYEVAVQRCNGRRYDPITQNVYHMEFCPPPEGMAVERMFEDDDSLAAVV 287 Query: 173 RRQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 R + ++ +D + V+ I V Sbjct: 288 SRWKYFDARKDELIECYEPVFVRIDGSRPVDVVSQEIFEQV 328 >gi|317133154|ref|YP_004092468.1| ABC transporter related protein [Ethanoligenens harbinense YUAN-3] gi|315471133|gb|ADU27737.1| ABC transporter related protein [Ethanoligenens harbinense YUAN-3] Length = 367 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 M G FI+ G G GKTT + L+ Sbjct: 29 MQKGKFITLLGPSGCGKTTLLRLIA 53 >gi|227533981|ref|ZP_03964030.1| adenylate kinase (ATP-AMP transphosphorylase) (AK) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239630330|ref|ZP_04673361.1| adenylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2] gi|227188358|gb|EEI68425.1| adenylate kinase (ATP-AMP transphosphorylase) (AK) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239527942|gb|EEQ66943.1| adenylate kinase [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 213 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 73/244 (29%), Gaps = 73/244 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T ++ T + R + G EA+ + Sbjct: 2 GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 48 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + V + + +++ ++ D D+ Y G + Q ++L+ I+ P Sbjct: 49 ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 101 Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166 D I +D+ + R+ R + ++F+R+D Sbjct: 102 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 161 Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +EK + L H V+ V I I+ Sbjct: 162 ATVKNRLKVNIEMNTPLLDFYEK--KGLL----------HTVNGDQDIDKVFAEIKAILA 209 Query: 210 ELVQ 213 + + Sbjct: 210 AVAK 213 >gi|229552729|ref|ZP_04441454.1| adenylate kinase [Lactobacillus rhamnosus LMS2-1] gi|229313935|gb|EEN79908.1| adenylate kinase [Lactobacillus rhamnosus LMS2-1] Length = 213 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 74/244 (30%), Gaps = 73/244 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T ++ T + R + G EA+ + Sbjct: 2 GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 48 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + V + + +++ ++ D D+ Y G + Q ++L+ I+ P Sbjct: 49 ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 101 Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166 D I +D+ + R+ R + ++F+R+D Sbjct: 102 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 161 Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + ++K + L H V+ V +I I+ Sbjct: 162 ETVKNRLKVNIEMNTPLLDFYQK--KGLL----------HTVNGDQDIDKVFADIKTILA 209 Query: 210 ELVQ 213 + + Sbjct: 210 AVAK 213 >gi|227113350|ref|ZP_03827006.1| shikimate kinase II [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 173 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 65/211 (30%), Gaps = 44/211 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G G GKTT L + L YD T V+ G Sbjct: 1 MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AL + + +R + ++ G + Sbjct: 56 GFRQRESL-----------------ALQQ---VTSNRCIIAT----GGGMVLAEANRRFM 91 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178 + I L ++ +R++ + L +++ R+ + Sbjct: 92 HDKGT-------VIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +A H++D++ + +++ ++L ++ Sbjct: 145 GVAH------HVIDASQTPEAIVASVLKVLR 169 >gi|89094387|ref|ZP_01167327.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Oceanospirillum sp. MED92] gi|89081279|gb|EAR60511.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Oceanospirillum sp. MED92] Length = 627 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 49/141 (34%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + L++ L K R +L G + Sbjct: 464 FTGLSGSGKSTIANALEKELHAKG-----------------IRTYILDGDNIRHGLNKDL 506 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + + G +++ A+ + + + + E Sbjct: 507 GFTDADRIENIRRISEVAKLMVDAGIVVIT--------AFISPFRAERQMAREMFDEGEF 558 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E + ++ P+++ R Sbjct: 559 SE------VYINTPIEVAESR 573 >gi|254253163|ref|ZP_04946481.1| Deoxynucleoside kinase [Burkholderia dolosa AUO158] gi|124895772|gb|EAY69652.1| Deoxynucleoside kinase [Burkholderia dolosa AUO158] Length = 228 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 47/167 (28%), Gaps = 26/167 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ EG G GKTT LL + P P E Sbjct: 18 RYLVIEGPIGVGKTTLARLLGERWSMH----ALLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 + + A + + AL G+ ++ D + Q ++ D ++ Sbjct: 71 Q----LSFALQRAQQAAELAAALDTGRPVVAD------FMPQKNDIFARLNLPDDEWQLY 120 Query: 124 --------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 PD + L ++ R+Q R E D + Sbjct: 121 RAVAAHLDVPHAPAPDLVVYLQASPEVLFSRIQKRGLPMELQISDAY 167 >gi|157157115|ref|YP_001464448.1| hypothetical protein EcE24377A_3451 [Escherichia coli E24377A] gi|193062181|ref|ZP_03043277.1| conserved hypothetical protein [Escherichia coli E22] gi|193067430|ref|ZP_03048398.1| conserved hypothetical protein [Escherichia coli E110019] gi|194426348|ref|ZP_03058903.1| conserved hypothetical protein [Escherichia coli B171] gi|209920460|ref|YP_002294544.1| hypothetical protein ECSE_3269 [Escherichia coli SE11] gi|218555558|ref|YP_002388471.1| hypothetical protein ECIAI1_3133 [Escherichia coli IAI1] gi|218696693|ref|YP_002404360.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli 55989] gi|256019092|ref|ZP_05432957.1| hypothetical protein ShiD9_09259 [Shigella sp. D9] gi|260845744|ref|YP_003223522.1| hypothetical protein ECO103_3668 [Escherichia coli O103:H2 str. 12009] gi|260857124|ref|YP_003231015.1| hypothetical protein ECO26_4092 [Escherichia coli O26:H11 str. 11368] gi|260869746|ref|YP_003236148.1| hypothetical protein ECO111_3813 [Escherichia coli O111:H- str. 11128] gi|300815534|ref|ZP_07095758.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|300824074|ref|ZP_07104195.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|331669801|ref|ZP_08370646.1| hypothetical ATP-binding protein YghR [Escherichia coli TA271] gi|331679058|ref|ZP_08379730.1| hypothetical ATP-binding protein YghR [Escherichia coli H591] gi|157079145|gb|ABV18853.1| conserved hypothetical protein [Escherichia coli E24377A] gi|192932401|gb|EDV84999.1| conserved hypothetical protein [Escherichia coli E22] gi|192959387|gb|EDV89822.1| conserved hypothetical protein [Escherichia coli E110019] gi|194415656|gb|EDX31923.1| conserved hypothetical protein [Escherichia coli B171] gi|209913719|dbj|BAG78793.1| conserved hypothetical protein [Escherichia coli SE11] gi|218353425|emb|CAU99494.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli 55989] gi|218362326|emb|CAQ99948.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli IAI1] gi|257755773|dbj|BAI27275.1| conserved hypothetical protein [Escherichia coli O26:H11 str. 11368] gi|257760891|dbj|BAI32388.1| conserved hypothetical protein [Escherichia coli O103:H2 str. 12009] gi|257766102|dbj|BAI37597.1| conserved hypothetical protein [Escherichia coli O111:H- str. 11128] gi|300523464|gb|EFK44533.1| conserved hypothetical protein [Escherichia coli MS 119-7] gi|300531463|gb|EFK52525.1| conserved hypothetical protein [Escherichia coli MS 107-1] gi|323178693|gb|EFZ64269.1| hypothetical protein ECOK1180_2425 [Escherichia coli 1180] gi|323183573|gb|EFZ68970.1| hypothetical protein ECOK1357_3353 [Escherichia coli 1357] gi|323946689|gb|EGB42710.1| ATP-binding protein YghR [Escherichia coli H120] gi|324018173|gb|EGB87392.1| hypothetical protein HMPREF9542_03228 [Escherichia coli MS 117-3] gi|331062714|gb|EGI34628.1| hypothetical ATP-binding protein YghR [Escherichia coli TA271] gi|331073123|gb|EGI44446.1| hypothetical ATP-binding protein YghR [Escherichia coli H591] gi|332102547|gb|EGJ05893.1| predicted protein with nucleoside triphosphate hydrolase domain [Shigella sp. D9] Length = 252 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193 >gi|54025361|ref|YP_119603.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Nocardia farcinica IFM 10152] gi|54016869|dbj|BAD58239.1| putative ATP sulfurylase large subunit [Nocardia farcinica IFM 10152] Length = 641 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L + Y + LL G A+ Sbjct: 465 FTGLSGAGKSTVANLVEKRLHEQGYHTY-----------------LLDGDNVRHGLNADL 507 Query: 69 IVFAAARLDHVENVIRPA---LMEGKILLC 95 A R++++ V+ A G I+L Sbjct: 508 GFTDADRVENIRRVVEVARLLADAGLIVLT 537 >gi|108804953|ref|YP_644890.1| adenylate kinase [Rubrobacter xylanophilus DSM 9941] gi|108766196|gb|ABG05078.1| Adenylate kinase [Rubrobacter xylanophilus DSM 9941] Length = 208 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 78/226 (34%), Gaps = 48/226 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +GAGK T + L ++ G AE L V E+ Sbjct: 3 IILLGPQGAGKGTQAARLSERTGARHIST------GDLVRAEIKAGTELGRKVQEYNDRG 56 Query: 67 EAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E + + + + +P L G +L D F + + + + ++L+E+ V Sbjct: 57 ELVP-----DEIIVEMAKPHLREAGSWIL-DGFPRT----EAQARALD----EALEELGV 102 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------RKDVMIHEK 172 D + L+ P ++ ++R+ R + + + E ++ E Sbjct: 103 GL---DRVVALEAPDEVLVRRLSGRRQSEATGRIYHLEHDPPPPDDPGPFVQRKDDTEEA 159 Query: 173 RRQIFLDIARNQPDRCH----------IVDSAHSFQSVATNILNIV 208 R+ L + Q + VD+ S + V +L ++ Sbjct: 160 IRRR-LRLYHEQTEPLKGYYAERGLLATVDATRSIEEVTEELLRVL 204 >gi|118348380|ref|XP_001007665.1| hypothetical protein TTHERM_00059330 [Tetrahymena thermophila] gi|89289432|gb|EAR87420.1| hypothetical protein TTHERM_00059330 [Tetrahymena thermophila SB210] Length = 368 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 18/209 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G AGKTT ++ LK L K V V E T E +++ E Sbjct: 10 ICLTGGPCAGKTTALTTLKEKLTEKGLKVFVVPEVP-TLTMEGGGMIIMGGLTSENVCRF 68 Query: 67 EAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++++ A +++ + I A + GK ++L DR + Y + L + Sbjct: 69 QSLLMKA-QINLEDYFIDLAKLNGKPAVVLMDRGVMDPKGYMDDNTWQAVLDESGWNSVY 127 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +++ D I L + G + Y+L + +E I K Q + R Sbjct: 128 LRDKRYDAVIHL-VTAADG---AEKFYTLENNVA--RYEDGPTAI--KVDQALQNAWRGH 179 Query: 185 PDRCHIVDSAHS-----FQSVATNILNIV 208 P I+D++ + V + V Sbjct: 180 PHHI-IIDNSAPSFDKKIEKVINAVEKFV 207 >gi|113475590|ref|YP_721651.1| adenylylsulfate kinase [Trichodesmium erythraeum IMS101] gi|110166638|gb|ABG51178.1| adenylylsulfate kinase [Trichodesmium erythraeum IMS101] Length = 175 Score = 43.9 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 M G + F G+ GAGKTT ++ L+++ V Sbjct: 1 MEKGFILWFTGLSGAGKTTISKIVAEKLKQRGRKV 35 >gi|225453608|ref|XP_002267347.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 222 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 46/143 (32%), Gaps = 27/143 (18%) Query: 81 NVIRPALMEGKILLCDRFLDS-------SYAYQGE---RDSSQHLFLDSLQEISVQEVM- 129 +I+ EGKI+ S A QG + + + + +M Sbjct: 79 KMIQDYKKEGKIV------PSEVTVKLLQQAMQGSTNNKFLIDGFPCNEENRTAFENIMK 132 Query: 130 --PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQ 184 PD + D + +R+ NR R + ++ + E + + Sbjct: 133 VEPDFVLFFDCSQEELTRRILNRNQGRVDDNIQAIPKRFQVYFESTLPVIDYY-----SS 187 Query: 185 PDRCHIVDSAHSFQSVATNILNI 207 + +D+ S + V + +I Sbjct: 188 KGKVQKIDAERSIEEVFEAVKSI 210 >gi|159107451|ref|XP_001704005.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative [Giardia lamblia ATCC 50803] gi|157432052|gb|EDO76331.1| Deoxyguanosine kinase/deoxyadenosine kinase subunit, putative [Giardia lamblia ATCC 50803] Length = 215 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 19/151 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI EG AGK+T S L T P E L ++G + Sbjct: 9 FI-LEGNIAAGKSTLASKLANMY---GLT-LFTEPVEENPYLE-----LFYEDPKKWGYQ 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS- 124 + F RL+ + I+ + +L DR + S + + + + Sbjct: 59 MQIWFFN-QRLNTYKEAIQASKTAKG-VLLDRSVFSDLVFALNSYEDGFISDADFKLYNE 116 Query: 125 ------VQEVMPDCTIILDLPVDIGLKRVQN 149 +P + LD + R+ N Sbjct: 117 QYQSQLKDLPLPTVILYLDATPETCYYRIHN 147 >gi|209517983|ref|ZP_03266815.1| sulfate adenylyltransferase, large subunit [Burkholderia sp. H160] gi|209501589|gb|EEA01613.1| sulfate adenylyltransferase, large subunit [Burkholderia sp. H160] Length = 641 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 41/160 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T +LL++ L R LL G + Sbjct: 468 GLSGAGKSTIANLLEKRLHAMGK-----------------RTYLLDGDNVRHGLNKDLGF 510 Query: 71 FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A R++++ V + G I++ A+ + + L + +++ E Sbjct: 511 TAEDRVENIRRIAEVAKLMADAGVIVIT--------AFISPFRAERALARELMED---GE 559 Query: 128 VMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 + +D P+++ R R L+ +D Sbjct: 560 F---IEVFIDTPLEVAEGRDPKGLYKKARRGELKNFTGID 596 >gi|24114292|ref|NP_708802.1| hypothetical protein SF3031 [Shigella flexneri 2a str. 301] gi|30064339|ref|NP_838510.1| hypothetical protein S3232 [Shigella flexneri 2a str. 2457T] gi|24053448|gb|AAN44509.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042596|gb|AAP18320.1| hypothetical protein S3232 [Shigella flexneri 2a str. 2457T] gi|281602375|gb|ADA75359.1| Hypothetical ATP-binding protein YghR [Shigella flexneri 2002017] gi|313648102|gb|EFS12548.1| uncharacterized ATP-binding protein yghR [Shigella flexneri 2a str. 2457T] Length = 252 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 48/234 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKRVQNRYSLR 154 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERSLYQKMAQYRPELIIRLGIDIDTAISR-------- 193 Query: 155 ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + +K + + +DS + V + V Sbjct: 194 ------KPDHEYAELQDKI--GVMSTIGYNGTKILEIDSRAPYSEVLEQVQKAV 239 >gi|304406969|ref|ZP_07388623.1| cytidylate kinase [Paenibacillus curdlanolyticus YK9] gi|304343956|gb|EFM09796.1| cytidylate kinase [Paenibacillus curdlanolyticus YK9] Length = 233 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 82/232 (35%), Gaps = 38/232 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G GAGK+T + L Y T R V LS + Sbjct: 14 IAIDGPAGAGKSTVARSVAETL---GYIYIDT--------GAMYRAVTLSALRSGISPDD 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILL---CD-------RFLDSSYAYQGERDSSQHLF 116 + + + +E ++P+ G+++L CD R + + + + + Sbjct: 63 RMQL--SQHAESIEISLQPS-SAGQVVLLNGCDVTIDIRSREVTLNVSQVSAVERVRVRL 119 Query: 117 LDSLQEISVQE------------VMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + ++++ + V+PD + L V+ R R+ L+ Sbjct: 120 VAMQRQLARGKGVVMDGRDIGSHVLPDAELKVYLTATVEERALRRFKELDGRDGITLEQL 179 Query: 163 ERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 E + K ++ + PD + ++ + + VA NI+N+ + + Sbjct: 180 EHEIAERDRKDQEREISPLVCAPDAIVLDSTSMTIEQVADNIVNLSRTKLAE 231 >gi|296414524|ref|XP_002836949.1| hypothetical protein [Tuber melanosporum Mel28] gi|295632795|emb|CAZ81140.1| unnamed protein product [Tuber melanosporum] Length = 307 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 57/214 (26%), Gaps = 56/214 (26%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T L R L + + G+ E + + + Sbjct: 138 GGPGAGKGTQCQSLVRDYGFVHLSA-GDLLRAEQNREGSEFGELIKTYIREGKIVPM-EV 195 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++ A R + K + +D Sbjct: 196 TVALLENAMRDA--------IAAQQKTV---------------------FLID------- 219 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH------EKRRQIFLD 179 + P T+ + P D L+R+ R D E H + Sbjct: 220 GSLSP-LTLFFECPEDTLLQRLLKRGET-SGRIDDNIESIKKRFHTFEVTSMPVVDYY-- 275 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + +D++ + + V + + + ++ Sbjct: 276 ---EKKGKVVRIDASSTREGVYLQVQKQLADKLK 306 >gi|301067482|ref|YP_003789505.1| adenylate kinase [Lactobacillus casei str. Zhang] gi|300439889|gb|ADK19655.1| Adenylate kinase [Lactobacillus casei str. Zhang] Length = 218 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 73/244 (29%), Gaps = 73/244 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T ++ T + R + G EA+ + Sbjct: 7 GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + V + + +++ ++ D D+ Y G + Q ++L+ I+ P Sbjct: 54 ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106 Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166 D I +D+ + R+ R + ++F+R+D Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166 Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + +EK + L H V+ V I I+ Sbjct: 167 ATVKNRLKVNIEMNTPLLDFYEK--KGLL----------HTVNGDQDIDKVFAEIKAILA 214 Query: 210 ELVQ 213 + + Sbjct: 215 AVAK 218 >gi|47227941|emb|CAF97570.1| unnamed protein product [Tetraodon nigroviridis] Length = 219 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 12/84 (14%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------NQPD 186 + D +++ + R R + + + KR Q +L R + Sbjct: 140 VLFFDCSIEVCINRCLERGKNSGRTDDNR---ESL---NKRIQTYLQSTRPIIELYQKHG 193 Query: 187 RCHIVDSAHSFQSVATNILNIVWE 210 + +D++ S V ++ I+ + Sbjct: 194 KVCTIDASRSVDEVFADVKAILDK 217 >gi|21226912|ref|NP_632834.1| signal recognition particle subunit Ffh/SRP54 [Methanosarcina mazei Go1] gi|20905220|gb|AAM30506.1| signal recognition particle subunit Ffh/SRP54 [Methanosarcina mazei Go1] Length = 419 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 66/203 (32%), Gaps = 35/203 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT IS + L + Y V + G T A A L D G + Sbjct: 225 IVFVGINGTGKTTSISKMTHRLLKLGYSVVLAA--GDTFRAGAIDQ--LGIHADRLGVKM 280 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + ++ A +L D R + + +++I Sbjct: 281 IKHQAGADPAAVIYDAVQYAKAHNIDFVLSD---------TAGRMHTNMNLMAQMEKI-C 330 Query: 126 QEVMPDCTIILD--LPVDIGLKRVQN-------------RYSLRESAC----LDYFERKD 166 + PD I +D + + ++R + + Y K Sbjct: 331 RVSSPDLIIFVDEAVAGNDAVERAAQFNDAVPIDGSILTKIDADAKGGAAISIAYITGKP 390 Query: 167 VMIHEKRRQIFLDIARNQPDRCH 189 ++ Q + D+ + +P+ Sbjct: 391 ILFFG-VGQGYEDLKKFEPEWFV 412 >gi|325913625|ref|ZP_08175987.1| deoxyguanosine kinase [Lactobacillus iners UPII 60-B] gi|325476984|gb|EGC80134.1| deoxyguanosine kinase [Lactobacillus iners UPII 60-B] Length = 221 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ S+L ++L P + Sbjct: 4 IVLSGPIGAGKSSLTSILSKYLATD----PFYESVDDNPVLPLFYE----------NPKK 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQEI 123 A + L+ I+ AL +L DR + + +Q D + + + E+ Sbjct: 50 YAFLLQVYFLNTRFKSIKKALSADNNVL-DRSIYEDALFFQMNADIGRATKEEVTTYYEL 108 Query: 124 ---------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ + PD I + + + +KR+Q R E D Sbjct: 109 LDGMMAELKAMPKRQPDLLIHIHVSYETMIKRIQKRGRKYEQLSYD 154 >gi|313233219|emb|CBY24334.1| unnamed protein product [Oikopleura dioica] Length = 300 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 85/254 (33%), Gaps = 56/254 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----------GGTPAAEAARHVLLS 56 IS EG GK+T I +L+ +++++ T EP G+ + + Sbjct: 15 ISIEGNIATGKSTFIKILEEAAGTEDWEI--TPEPVSTWTQIEGKNGSSSGGNLLKLFYD 72 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + + RL +P A + + + DR++ +A Sbjct: 73 DAKRWSYTFQSFALLSRMRLQRA--PFKPRTVARLSERSIHSDRYI---FARNCFETGLM 127 Query: 114 HL------------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLD 160 L+SL ++ + I L + KR+ R E L+ Sbjct: 128 TETEWSIYKDWSTYLLESLGDLQLDGF-----IYLRCDPKVCDKRMAKRGRPEEQGVTLE 182 Query: 161 YF----ERKDVMIHEKRRQIFL--DIARNQPDRCHIVDSAHSF---QSVA----TNILNI 207 Y E+ + +H + F DI ++ P +D F + + + Sbjct: 183 YLSQLHEKHEKWLHNR---EFHDEDIMQDIP--ILEIDCNEEFHDDEEIKSKMLQQVREF 237 Query: 208 VWELVQKRVSPLSS 221 V ++ +KR LSS Sbjct: 238 VRQVQEKRQEKLSS 251 >gi|288963147|ref|YP_003453426.1| adenylylsulfate kinase [Azospirillum sp. B510] gi|288915399|dbj|BAI76882.1| adenylylsulfate kinase [Azospirillum sp. B510] Length = 648 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK++ L++ L R + R +LL G + Sbjct: 481 FTGLSGSGKSSVADRLEQELHRLGH-----------------RTMLLDGDNVRHGLNRDL 523 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++ V V + + G I+L ++ + + L++ Sbjct: 524 GFTDADRVENIRRVAEVAKLMVEAGLIVLA--------SFISPFRGERLMARSLLED--- 572 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E I +D P++I R Sbjct: 573 GEF---LEIFMDTPLEICEAR 590 >gi|254172921|ref|ZP_04879595.1| signal recognition 54 kDa protein [Thermococcus sp. AM4] gi|214033077|gb|EEB73905.1| signal recognition 54 kDa protein [Thermococcus sp. AM4] Length = 448 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 17/127 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT I+ L R LQ++ Y V + P A + ++ ++ FG E Sbjct: 107 GIQGSGKTTTIAKLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPNE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + + +G +++ D R + ++ +++I + + Sbjct: 165 ---KDAIKLAREGVEHFREKGVDVIIVD---------TAGRHKEESGLIEEMKQI-SEAI 211 Query: 129 MPDCTII 135 P I+ Sbjct: 212 KPHEVIL 218 >gi|199598853|ref|ZP_03212264.1| Adenylate kinase [Lactobacillus rhamnosus HN001] gi|258509461|ref|YP_003172212.1| adenylate kinase [Lactobacillus rhamnosus GG] gi|258540659|ref|YP_003175158.1| adenylate kinase [Lactobacillus rhamnosus Lc 705] gi|199590265|gb|EDY98360.1| Adenylate kinase [Lactobacillus rhamnosus HN001] gi|257149388|emb|CAR88361.1| Adenylate kinase [Lactobacillus rhamnosus GG] gi|257152335|emb|CAR91307.1| Adenylate kinase [Lactobacillus rhamnosus Lc 705] gi|259650740|dbj|BAI42902.1| adenylate kinase [Lactobacillus rhamnosus GG] Length = 218 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 74/244 (30%), Gaps = 73/244 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T ++ T + R + G EA+ + Sbjct: 7 GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + V + + +++ ++ D D+ Y G + Q ++L+ I+ P Sbjct: 54 ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106 Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166 D I +D+ + R+ R + ++F+R+D Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166 Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + ++K + L H V+ V +I I+ Sbjct: 167 ETVKNRLKVNIEMNTPLLDFYQK--KGLL----------HTVNGDQDIDKVFADIKTILA 214 Query: 210 ELVQ 213 + + Sbjct: 215 AVAK 218 >gi|193702261|ref|XP_001951037.1| PREDICTED: adenylate kinase isoenzyme 1-like [Acyrthosiphon pisum] Length = 191 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 46/213 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT------REPGGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T + + + T G+ + ++ + Sbjct: 13 GGPGSGKGTLCDKIVA---KYGFTHISTGDLLRDEVNTGSERGQELVKIMKEGALVPTSV 69 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + I+ + K L D + R+ Q ++ Sbjct: 70 VMELL----------NEKIKSKVATSKGFLIDGY---------PREKKQGEEFET----- 105 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 + P D + L+ + ++R+ R + + + +KR Q F D Sbjct: 106 --AIKPVDMVLYLESKDETMVERLLKRAETSGRSDDN------METIKKRLQTFHDNNDP 157 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 I + I+ + S ++V + LV Sbjct: 158 IIEAYKSKVVIISAEQSAEAVFAEAEKKLDTLV 190 >gi|312881141|ref|ZP_07740941.1| deoxynucleoside kinase [Aminomonas paucivorans DSM 12260] gi|310784432|gb|EFQ24830.1| deoxynucleoside kinase [Aminomonas paucivorans DSM 12260] Length = 206 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 79/228 (34%), Gaps = 33/228 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I EG+ +GKTT + L+ R L V E P +L D Sbjct: 1 MGQVRLIV-EGMTASGKTTTVDLVSRRL---GLSV--MPEEFRDPY-----DLLRRFHHD 49 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ------- 113 A + F R A E + +L DR + Y G Sbjct: 50 RTWALPMQLQFLVTRFAQYLC----ASEEDRYVL-DRSVFGDRIYAGLYHRLGYFTDRQF 104 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEK 172 +LD + P ++L P++ L+R++ R E +A DY+ +H+ Sbjct: 105 QTYLDLYHSLLGNLCPPRLILVLKCPLETVLERIRRRGREDELAAGEDYW----RALHQA 160 Query: 173 RRQIFLDIARNQPDRC--HIVDSAHSFQSVA-TNILNIVWELVQKRVS 217 + FL +++ ++D S V ++ +++R+ Sbjct: 161 -YEGFLPHLKDEKPAIPTLVLD-TGSVNLVGDREAIDAFLADLRERLG 206 >gi|268325095|emb|CBH38683.1| putative signal recognition particle protein [uncultured archaeon] Length = 350 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 17/151 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I F G+ G GKTT I+ + + L + V + T A AA + Sbjct: 143 KKPIIIVFVGVNGTGKTTSIAKVAKKLLGTGHSVVIAA--ADTYRAGAAEQI--ETHASN 198 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G + + + V + + A G ++L D R + ++ L Sbjct: 199 LGLKVIKHQYGSDPAAVVYDANKYASANGIDVVLAD---------TAGRMHTSINLMEQL 249 Query: 121 QEISVQEVMPDCTIILD--LPVDIGLKRVQN 149 ++I + PD + +D + + ++R + Sbjct: 250 KKI-CRVTKPDMVLFVDEAVAGNDAVERAKK 279 >gi|261403125|ref|YP_003247349.1| cytidylate kinase [Methanocaldococcus vulcanius M7] gi|261370118|gb|ACX72867.1| cytidylate kinase [Methanocaldococcus vulcanius M7] Length = 178 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + PD TI P+++ +R+ R ++ + L ++ ++ ++I+ Sbjct: 85 WMLLKNGIKPDLTIWFKAPLEVRAERISKRENIDKDIALKKMIERENSEKKRYKEIYGID 144 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211 + I+D++ + + V + + + L Sbjct: 145 IDDLSIYDLIIDTSKWNVEGVFNIVSSAIDNL 176 >gi|21668341|emb|CAC84131.1| thymidine kinase [Diadromus pulchellus ascovirus 4a] Length = 186 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 44/216 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I EG G GK++ + N V E + + Sbjct: 1 MYICIEGNIGCGKSSVLKAFA-----MNNFVVFPEPLEKWTLLE---ELYRDPEKYAYPF 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHLFLDS 119 + + ++ N L + + +R S + G S + LDS Sbjct: 53 QLQVVL-----SQIETNKAIRRLSRSCVKIMERHGGRPRTCSRTS--GIGRSPRSYVLDS 105 Query: 120 LQEISVQEVMPDCTIILD----LPVDIGLKRVQNRYSLRESACLDYFERK--DVMIHEKR 173 ++ +V+P+ I LD L L+R + FE + + + Sbjct: 106 CYDLI--DVVPEYYIYLDSTEGLSPAQ-LQR-------------NRFEERNISLDYLIRL 149 Query: 174 RQIFLDIARNQPDRCHIVD-SAHSFQSVATNILNIV 208 + + + + ++D + + + + NI +I+ Sbjct: 150 DERYKEELSKLKNTI-VIDCGSMTTEQIVKNIRDIL 184 >gi|112983202|ref|NP_001037019.1| putative deoxynucleoside kinase [Bombyx mori] gi|13506751|gb|AAK28318.1|AF226281_1 putative deoxynucleoside kinase [Bombyx mori] Length = 248 Score = 43.9 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 74/231 (32%), Gaps = 25/231 (10%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCGVD 60 F F EG G+GKTT + ++F D+ + EP ++L Sbjct: 9 FTVFVEGNIGSGKTTFLEHFRQF-----EDITLLTEPVEMWRDLKGCNLLELMYKDPEKW 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERDSSQHLFLDS 119 ++ + H P + + L R+ +Q LD Sbjct: 64 AMTFQSYVSLTMLDM--HRRPAPTPVKLMERSLFSARYCFVEHIMRNNTLHPAQFAVLDE 121 Query: 120 LQEISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMIHEKRRQ 175 + P D + L I +R++ R E L Y E +H + + Sbjct: 122 WFRFIQHNI-PIDADLIVYLKTSPSIVYQRIKKRARSEEQCVPLSYIE----ELH-RLHE 175 Query: 176 IFL--DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 +L I P ++D+ + ++++K V+ + S + Sbjct: 176 DWLINRIHAECPAPVLVLDADLDLSQITDEYKRSEHQILRKAVNVVMSSPN 226 >gi|326332212|ref|ZP_08198492.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae bacterium Broad-1] gi|325949918|gb|EGD41978.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae bacterium Broad-1] Length = 191 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 69/207 (33%), Gaps = 37/207 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE---AARHVLLSCGVDEFGAEAE 67 G GAGK T + T + ++ E+ ++ Sbjct: 7 GPPGAGKGTQAKFIAEHF---GIPAISTGDIFRANVSQGTPLGIEAASYMDKGEYVPDSV 63 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 + R+D P +G L D + R +Q LD + + + Sbjct: 64 TNLMVRNRID------EPDAAKGF--LLDGY---------PRTLAQVEELDGMIKFTGHA 106 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IARN 183 + D ++L + D ++R+ R L A + +DV+ +R++++L+ + Sbjct: 107 L--DAVVVLTVDKDEIVQRLLQRAELEGRAD----DTEDVI--RRRQEVYLEETAPLIEV 158 Query: 184 QPDR--CHIVDSAHSFQSVATNILNIV 208 R H +D V I + + Sbjct: 159 YKGRGLVHEIDGMGEVDDVTKRIFDEL 185 >gi|305431526|ref|ZP_07400701.1| adenylyl-sulfate kinase [Campylobacter coli JV20] gi|304445418|gb|EFM38056.1| adenylyl-sulfate kinase [Campylobacter coli JV20] Length = 194 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 38/143 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + +++ L + + + LL G + Sbjct: 30 FTGLSGSGKSTLANAVEKKLFEQGFHTY-----------------LLDGDNVRHGLNGDL 72 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A+R++++ + + + G I+LC A+ + + L D L + Sbjct: 73 GFDEASRVENIRRIGELCKLFMDAGMIVLC--------AFISPFEKDRKLIKDLLND--- 121 Query: 126 QEVMPD--CTIILDLPVDIGLKR 146 D I +D P++I KR Sbjct: 122 -----DEYIEIFIDTPLEICEKR 139 >gi|291278684|ref|YP_003495519.1| signal recognition particle protein [Deferribacter desulfuricans SSM1] gi|290753386|dbj|BAI79763.1| signal recognition particle protein [Deferribacter desulfuricans SSM1] Length = 447 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 19/124 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67 G++G+GKTT L ++ Q+ DV + + PAA +L L V E + Sbjct: 109 GLQGSGKTTTAGKLAKYFQKNGKDVLLVADDIYRPAAIDQLEILGKQLKVDVFSKRDEQD 168 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A+ A + H ++ +++ D R ++ L+ I + Sbjct: 169 AVKIAKEAVQHAKS------AAKDVVIID---------TAGRLHIDETLMEELKNI-KEA 212 Query: 128 VMPD 131 + PD Sbjct: 213 INPD 216 >gi|150400923|ref|YP_001324689.1| chromatin associated protein KTI12 [Methanococcus aeolicus Nankai-3] gi|150013626|gb|ABR56077.1| Chromatin associated protein KTI12 [Methanococcus aeolicus Nankai-3] Length = 255 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 31/163 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G+ G GK+T L + L K D + + R ++ Sbjct: 1 MLIILTGLPGTGKSTFSKKLSKKLWEKGIDNIIL-------GTDLIRE-----QFPQWSN 48 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E + + + +I+ AL + ++ D D++Y Y +R ++ +E + Sbjct: 49 EQEEFI-----KNSTDYLIKNALKD-YTVIVD---DTNY-YNSKRR----DLINIAKENN 94 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKD 166 +M I L P+D LKR R + + +D F + D Sbjct: 95 KNHIM----IYLKAPLDTILKRNIQRGAKIPNEVIIDMFNKFD 133 >gi|73994237|ref|XP_850303.1| PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor [Canis familiaris] Length = 355 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 20/168 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------- 58 I+ +G +GK+ + L +++ T V S Sbjct: 60 ITVDGNICSGKSKVAKEIAEKLGLRHFPEAGIHYADSTTGDGRPLDVEFSGSCSMEKFYD 119 Query: 59 ----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGE 108 D ++ ++ A RL + + L G+ ++ +R + S + + Q Sbjct: 120 DPRSNDGNSYRLQSWLY-ANRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMYNQQF 178 Query: 109 RDSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++++++ E + P I +D+PV ++Q + E Sbjct: 179 IRKQCVDHYNEVKKVTICEYLPPHVVIYIDVPVPEIQSQIQKKGDPHE 226 >gi|332023686|gb|EGI63910.1| Putative adenylate kinase isoenzyme F38B2.4 [Acromyrmex echinatior] Length = 227 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 27/205 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK+T + + + + ++R+ LL V + Sbjct: 39 GGPGAGKSTQCTRIAQHY---GFCAIISRQ-------------LLRTEVATGSQRGVILA 82 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SLQEISVQEV 128 + + + + + L++ K+L SS + + Q Q Sbjct: 83 YLMSEGKLIPSDVMVELIKAKML-------SSL-HDTRGFLLSGFPREKTQCQHFDKQIR 134 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 PD + L + + L R+ + E I E+RR + I R + Sbjct: 135 TPDLVLYLYVRDSLLLDRILAKTITATERPQRSIEENWQRIKEQRR-LMKPIFRYYKKQL 193 Query: 189 HIVDSAHSFQSVATNILNIVWELVQ 213 I+D + V +I + +++ Sbjct: 194 VIIDGENDETEVFEDICKAIDKVMN 218 >gi|321455292|gb|EFX66429.1| hypothetical protein DAPPUDRAFT_116436 [Daphnia pulex] Length = 582 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 33/102 (32%), Gaps = 24/102 (23%) Query: 1 MNSGLF----ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 M G F I F G+ GAGKTT L+ +L + L Sbjct: 2 MGRGRFRGCTIWFTGLSGAGKTTLSFALENYLIARGIPAFG-----------------LD 44 Query: 57 CGVDEFGAEAEAIVFAAARLD---HVENVIRPALMEGKILLC 95 FG ++ A R + V V + G + LC Sbjct: 45 GDNMRFGLNSDLGFTDADREENIRRVAEVAKLFAESGVVTLC 86 >gi|317014038|gb|ADU81474.1| adenylate kinase [Helicobacter pylori Gambia94/24] Length = 191 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D + + H + R +FL Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D +A ++ S + + + + Sbjct: 151 DPLAEIQNFYKNKKVYKAINGERSIEEIVNEMQKYILSF 189 >gi|308189954|ref|YP_003922885.1| deoxyguanosine kinase [Mycoplasma fermentans JER] gi|319777235|ref|YP_004136886.1| deoxyguanosine kinase [Mycoplasma fermentans M64] gi|307624696|gb|ADN69001.1| deoxyguanosine kinase [Mycoplasma fermentans JER] gi|318038310|gb|ADV34509.1| Deoxyguanosine kinase [Mycoplasma fermentans M64] Length = 223 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 21/213 (9%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 GI G +GK+T L + + + E + + G ++ Sbjct: 4 GISGMISSGKSTLTRNLVKHYKNS--MMLKEYEEDDDVFNTFLKWLYEKQPNLTIGFQSY 61 Query: 68 AI-VFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQ----GERDSSQHLFLDSL- 120 + + D + + + DRF Y + + D+L Sbjct: 62 VVENHTSKLADCFKKFSEKGYKYKDNHIFLDRFSIEHYIFANVNLRPKGKKYLEGYDALF 121 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEKRRQI 176 + ++ PD I LD+ D KR+ R E+ DYF R+ +++ Sbjct: 122 SHLITKDETPDLAIFLDMTFDTFKKRLFERGREVETENWNKNKDYF-RELYDLYKPL--- 177 Query: 177 FLDIARNQPDRCHIVDS-AHSFQSVATNILNIV 208 F+ A+ I+++ + + V + ++ Sbjct: 178 FIKQAKKYDLNYVIIETDNLTEKQVFEKAVEVI 210 >gi|126330658|ref|XP_001364586.1| PREDICTED: similar to Deoxycytidine kinase [Monodelphis domestica] Length = 260 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 30/186 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 I+ EG AGK+T +++LK+ +++V V R + + + Sbjct: 24 IAIEGNIAAGKSTFVNILKQV--SDDWEVVPEPVARWCNVQSTQDEFEELTTSQKSGGNV 81 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R + +P + + + DR++ +S Sbjct: 82 LQMMYEKPERWSFTFQTYACLSRIRAQLSAVNGKFKEAEKPVVFFERSVYSDRYIFASNL 141 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ + + + D + Q + D I L + L R+ R E Sbjct: 142 YESDCMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLRATPEKCLHRIFLRGREEEQEIP 201 Query: 159 LDYFER 164 L+Y E+ Sbjct: 202 LEYLEK 207 >gi|323173771|gb|EFZ59400.1| hypothetical protein ECLT68_2089 [Escherichia coli LT-68] Length = 252 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193 >gi|227494896|ref|ZP_03925212.1| deoxyguanosIne kinase [Actinomyces coleocanis DSM 15436] gi|226831348|gb|EEH63731.1| deoxyguanosIne kinase [Actinomyces coleocanis DSM 15436] Length = 211 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 37/182 (20%) Query: 14 GAGKTTHISLLKRFL------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 GAGKTT +L L ++ + + + TP + R Sbjct: 3 GAGKTTVSEVLGAELGFMVVKEKVDDSLVLPLFYTSTPDEKEKRRY----------PFLL 52 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ-----GERDSSQHLFLDSL 120 + F + R + +R G+ ++ DR + D +A+ G D ++ D L Sbjct: 53 QLEFLSNRFASIREALR---EGGRRVVMDRSIYEDWYFAHINHQLGGISDLEFKIYSDLL 109 Query: 121 QEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + + PD + L D L R+ R E + + V + K + Sbjct: 110 NNMMQAVAEIPKKAPDLFVYLRGDFDTILDRIAQRGRSFEQSP------ELVSYYRKLWE 163 Query: 176 IF 177 + Sbjct: 164 GY 165 >gi|156740117|ref|YP_001430246.1| shikimate kinase [Roseiflexus castenholzii DSM 13941] gi|156231445|gb|ABU56228.1| Shikimate kinase [Roseiflexus castenholzii DSM 13941] Length = 173 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 66/213 (30%), Gaps = 48/213 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ I+ G+ G GK+T L L + V T A + G Sbjct: 1 MSMPEIIALVGLSGGGKSTVARHLAARL---GWRVCDTDGLVEQMAGRTIPAIFADEGEG 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + AA + G I+L DR L Sbjct: 58 AFRERETVALMAA-----LTEPNTIVATGGGIVLRDR------------------NRALL 94 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKRRQI 176 +E + + LD P D+ + R++ R D E + +R + Sbjct: 95 REKAF-------VVWLDAPTDVLIARLRAHDEERPLLAGDDPAARLE----TLRAQRAAL 143 Query: 177 FLDIARNQPDRCHIVDSA-HSFQSVATNILNIV 208 + D+A +D++ + + VA I+ + Sbjct: 144 YRDVAH------VTIDTSEAAPEDVAERIVGAL 170 >gi|73980217|ref|XP_851267.1| PREDICTED: similar to thymidylate kinase family LPS-inducible member [Canis familiaris] Length = 446 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 46/211 (21%) Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74 AGKTT + L+ + P D+ ++ Sbjct: 11 AGKTTVTQSISDSLKA----ALLKSPPACISQWRKI--------FDDEPTIIRRAFYSLG 58 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE---RDSSQHLFLD--SLQEISVQEVM 129 + + + ++ DR+ S+ Y QHL S+ + Sbjct: 59 NYIVASEIAKESTKSP--VIVDRYWHSTATYAIATEVTGGLQHLPPAHHSIYQWPR---- 112 Query: 130 PDCTIILD-----------LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 D + + ++R+Q R R + + + +K + Sbjct: 113 -------DLLKPDLVLLLTVSPEERMRRIQGRGMERTREETEL--EANSIFRQKVEMSYQ 163 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + P C +VD++ S + V +L+I+ Sbjct: 164 RM--ENPG-CLLVDASPSREEVLQMVLSIIQ 191 >gi|30262547|ref|NP_844924.1| hypothetical protein BA_2556 [Bacillus anthracis str. Ames] gi|47527845|ref|YP_019194.1| hypothetical protein GBAA_2556 [Bacillus anthracis str. 'Ames Ancestor'] gi|165868531|ref|ZP_02213191.1| hypothetical protein BAC_2579 [Bacillus anthracis str. A0488] gi|167632569|ref|ZP_02390896.1| hypothetical protein BAH_2618 [Bacillus anthracis str. A0442] gi|167637556|ref|ZP_02395835.1| hypothetical protein BAQ_2605 [Bacillus anthracis str. A0193] gi|170685302|ref|ZP_02876526.1| hypothetical protein BAM_2608 [Bacillus anthracis str. A0465] gi|170704749|ref|ZP_02895215.1| hypothetical protein BAK_2646 [Bacillus anthracis str. A0389] gi|177649703|ref|ZP_02932705.1| hypothetical protein BAO_2557 [Bacillus anthracis str. A0174] gi|190565642|ref|ZP_03018562.1| hypothetical protein BATI_2466 [Bacillus anthracis Tsiankovskii-I] gi|227814634|ref|YP_002814643.1| hypothetical protein BAMEG_2044 [Bacillus anthracis str. CDC 684] gi|229603292|ref|YP_002866870.1| hypothetical protein BAA_2615 [Bacillus anthracis str. A0248] gi|254685123|ref|ZP_05148983.1| hypothetical protein BantC_14890 [Bacillus anthracis str. CNEVA-9066] gi|254737574|ref|ZP_05195277.1| hypothetical protein BantWNA_20664 [Bacillus anthracis str. Western North America USA6153] gi|254743243|ref|ZP_05200928.1| hypothetical protein BantKB_19912 [Bacillus anthracis str. Kruger B] gi|254751889|ref|ZP_05203926.1| hypothetical protein BantV_05471 [Bacillus anthracis str. Vollum] gi|254760409|ref|ZP_05212433.1| hypothetical protein BantA9_19036 [Bacillus anthracis str. Australia 94] gi|30257179|gb|AAP26410.1| hypothetical protein BA_2556 [Bacillus anthracis str. Ames] gi|47502993|gb|AAT31669.1| hypothetical protein GBAA_2556 [Bacillus anthracis str. 'Ames Ancestor'] gi|164715257|gb|EDR20774.1| hypothetical protein BAC_2579 [Bacillus anthracis str. A0488] gi|167514105|gb|EDR89472.1| hypothetical protein BAQ_2605 [Bacillus anthracis str. A0193] gi|167532867|gb|EDR95503.1| hypothetical protein BAH_2618 [Bacillus anthracis str. A0442] gi|170130550|gb|EDS99411.1| hypothetical protein BAK_2646 [Bacillus anthracis str. A0389] gi|170670662|gb|EDT21401.1| hypothetical protein BAM_2608 [Bacillus anthracis str. A0465] gi|172084777|gb|EDT69835.1| hypothetical protein BAO_2557 [Bacillus anthracis str. A0174] gi|190563669|gb|EDV17634.1| hypothetical protein BATI_2466 [Bacillus anthracis Tsiankovskii-I] gi|227004129|gb|ACP13872.1| hypothetical protein BAMEG_2044 [Bacillus anthracis str. CDC 684] gi|229267700|gb|ACQ49337.1| hypothetical protein BAA_2615 [Bacillus anthracis str. A0248] Length = 186 Score = 43.9 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 71/222 (31%), Gaps = 55/222 (24%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG---TPAAEAARHVLLS 56 MN I+ + G GKTT L L ++ R T + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTERLTHKLMNS-KALYFDRYNFDNCPTDICKWI------ 53 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 D + + + H+ IR + ++ I+ D +AY Sbjct: 54 --DDGANYDEWVLTPLIKDIQHL---IRDSNVDYIIV------DYPFAY----------- 91 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 92 ---LNSEMRQFI--DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHY 137 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 138 INYARKAYLEALHTVKPNSDIVLDGALSVDQIINQIEEELYR 179 >gi|322383942|ref|ZP_08057672.1| ferrichrome ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151419|gb|EFX44606.1| ferrichrome ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 263 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 4/97 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGV 59 G IS G G+GK+T + L+ R L+ V + +E + AR + +L Sbjct: 25 QKGEIISLLGPNGSGKSTLLKLMARLLEPHQGSVILDGKELASMKTVDVARKLSMLPQMN 84 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 D + R H L L+ D Sbjct: 85 DHQLDLTVRELVEFGR--HPHKPWFQRLDHEDHLIVD 119 >gi|52549652|gb|AAU83501.1| adenylate kinase and related kinases [uncultured archaeon GZfos29E12] Length = 217 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 21/148 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G G+GK T LL + T + R L A Sbjct: 1 MIIVLFGPPGSGKGTQAKLLAE---KYGVPHIST--------GDILRENLKKETKLGLEA 49 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + + V + + L++ ++ D S + G + ++L +I Sbjct: 50 KT-----YMDKGELVPDDLLIGLIKDRLSESD--CASGFLLDGYPRTLPQA--ETLSKIL 100 Query: 125 VQ-EVMPDCTIILDLPVDIGLKRVQNRY 151 + D + +D+P + LKR+ R Sbjct: 101 TELGKNLDVVLNIDVPDEKLLKRLAGRR 128 >gi|49479445|ref|YP_037731.1| hypothetical protein BT9727_3409 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331001|gb|AAT61647.1| conserved hypothetical protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 177 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 31/144 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 30 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 78 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E+ I+ +G +++ DR F ++ + + ++ Sbjct: 79 ----FIANQKMFIEDKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 134 Query: 116 FLDSLQEISVQEVMPDCTIILDLP 139 L L+E D LD+ Sbjct: 135 ELYKLRE-----CRSDAIFYLDVS 153 >gi|282164017|ref|YP_003356402.1| putative adenylyl-sulfate kinase [Methanocella paludicola SANAE] gi|282156331|dbj|BAI61419.1| putative adenylyl-sulfate kinase [Methanocella paludicola SANAE] Length = 183 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 32/143 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT + L+ K V V + R VL + E AIV Sbjct: 9 GLPGSGKTTIADITADILRVKGVHVKVLN-------IDDVRKVL--TPHATYSLEERAIV 59 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 +AA + + + + EG ++ D L ++++ ++++P Sbjct: 60 YAA-----MAYMAKLLVDEGVNVIID----------------ATGNLRQYRDVA-RKLIP 97 Query: 131 DCT-IILDLPVDIGLKRVQNRYS 152 D I + P+D+ ++R + R Sbjct: 98 DFVEIYVKCPLDVAIRREEARRG 120 >gi|186682826|ref|YP_001866022.1| adenylate kinase [Nostoc punctiforme PCC 73102] gi|186465278|gb|ACC81079.1| adenylate kinase [Nostoc punctiforme PCC 73102] Length = 207 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 81/224 (36%), Gaps = 46/224 (20%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV------DE 61 G G+GK+T L R+ + + T E R + E Sbjct: 4 VILGGSGSGKSTQAQRLGRYF---DIPLIST--------GEILREAISGDQPLPEFRWSE 52 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCD----RF----LDSSYAYQGER 109 V+A+ L + RP + +G+++ + D R ++ + +G Sbjct: 53 ADPRTSLSVYAS--LSELGYHARPYIQKGELVPDEMIIDLIRIRLRQPDINCDWVLEGYP 110 Query: 110 DSS-QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++ Q LD L + Q++ D I L +P + + R R + + +R+ + Sbjct: 111 RTAFQAEELDFLLDDLGQKL--DWAIYLQVPEAVMVSRSLGRSLPDDQ--PEIVQRRVEL 166 Query: 169 IHEK---RRQIFLDIARNQPDRCHI-VDSAHSFQSVATNILNIV 208 +++ + + RC + ++ S V NIL ++ Sbjct: 167 FYDRTIPILEYYDRR------RCLLTINGDQSPDMVQQNILTLL 204 >gi|159028982|emb|CAO87443.1| gmk [Microcystis aeruginosa PCC 7806] Length = 184 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 63/212 (29%), Gaps = 35/212 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I G G GK T + L V T P E + L Sbjct: 1 MQPGQLIVITGPSGVGKGTLVRHLLTRFPNLYLSVSATTRPPRPGEIEGEDYYFLDRPSF 60 Query: 61 EFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E A + +A + I L G+ ++ + Sbjct: 61 EEKMAAGQFLESAEYAGNYYGTPQSAIAAQLAAGQTVIL------------------EIE 102 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+ +++ IL + +R+++R E+A E + R+ Sbjct: 103 LEGARQVCQSFPEARRIFILPPSFEELERRLRDRGKDAETAIARRLE--------RARE- 153 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++A ++ IV+ ++ I I+ Sbjct: 154 --ELAASEEFPYQIVN--DDLETALDAIEKII 181 >gi|15805329|ref|NP_294021.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus radiodurans R1] gi|6457974|gb|AAF09882.1|AE001891_1 deoxyguanosine kinase/deoxyadenosine kinase subunit [Deinococcus radiodurans R1] Length = 207 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 59/206 (28%), Gaps = 29/206 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++++ G G+GK+T +L + P R V Sbjct: 1 MYVAVSGNIGSGKSTLTRMLAERYGLRPVYEPYAENPYLEDFYHDMRQYSFHSQVYFLSR 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSS-YAY----QGERDSSQHLFL 117 E H+ V ++ DR F D++ +A G+ Sbjct: 61 RLE---------QHLGMVTGARY-----VIQDRTVFEDANIFARNLYESGQMGERDWQTY 106 Query: 118 DSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L E + + PD I +D + +R+ R E A D + + + Sbjct: 107 RGLYEGVLPALRVPDLLIHIDAGLPTLRRRIALRGRDYEQAIPD----EYLAGLNRLYAG 162 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVAT 202 ++ P VD V Sbjct: 163 WIAAFDLCP--VVRVDGDA-LDFVHD 185 >gi|157162464|ref|YP_001459782.1| hypothetical protein EcHS_A3164 [Escherichia coli HS] gi|188494225|ref|ZP_03001495.1| conserved hypothetical protein [Escherichia coli 53638] gi|157068144|gb|ABV07399.1| conserved hypothetical protein [Escherichia coli HS] gi|188489424|gb|EDU64527.1| conserved hypothetical protein [Escherichia coli 53638] Length = 252 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 34/173 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL------FLDS----LQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + FL L + Q P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERCLYQQMAQ-YRPELIIRLGIDIETAISR 193 >gi|66819705|ref|XP_643511.1| hypothetical protein DDB_G0275667 [Dictyostelium discoideum AX4] gi|60471628|gb|EAL69584.1| hypothetical protein DDB_G0275667 [Dictyostelium discoideum AX4] Length = 273 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 25/91 (27%), Gaps = 15/91 (16%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G +GKTT L V + E +L++ + Sbjct: 3 LIVLSGPPCSGKTTRAKELYEHFTNLGKKVIIINE----------ESLLINKNEGYKDSL 52 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96 E ++ L + +++ D Sbjct: 53 TE-----KMTRGSLKGATDRNLSKDTVVISD 78 >gi|224136762|ref|XP_002322409.1| predicted protein [Populus trichocarpa] gi|222869405|gb|EEF06536.1| predicted protein [Populus trichocarpa] Length = 235 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 69/219 (31%), Gaps = 58/219 (26%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI+F G G+GK T + + A E R + S Sbjct: 45 FITFVLGGPGSGKGTQCQKIVETF---GFK--------HLSAGELLRREIESNS------ 87 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD---R-------FLDSSYAYQGERDSSQH 114 +H ++ + EG+I+ + R DS+ + Sbjct: 88 ------------EHWSQMLN-TIKEGRIVPSEVTVRLIQQEMESSDSN------KFLIDG 128 Query: 115 LFLDSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 I+ + + P+ + D P + +KRV NR R +D +++ Sbjct: 129 FPRTEENRIAFEQLIGLEPNVVLFFDCPEEEMVKRVLNRNQGRVDDNIDTVKKR-----L 183 Query: 172 KRRQIF-LDIARNQPDRCHI--VDSAHSFQSVATNILNI 207 K +I L + R + +++ + + + I Sbjct: 184 KVFEILNLPVIDYYSKRGKLCKINAVGTEDEIFEKVRPI 222 >gi|167464791|ref|ZP_02329880.1| iron compound ABC transporter, ATP-binding protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 266 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 4/97 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV-LLSCGV 59 G IS G G+GK+T + L+ R L+ V + +E + AR + +L Sbjct: 28 QKGEIISLLGPNGSGKSTLLKLMARLLEPHQGSVILDGKELASMKTVDVARKLSMLPQMN 87 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 D + R H L L+ D Sbjct: 88 DHQLDLTVRELVEFGR--HPHKPWFQRLDHEDHLIVD 122 >gi|307718905|ref|YP_003874437.1| cytidylate kinase [Spirochaeta thermophila DSM 6192] gi|306532630|gb|ADN02164.1| cytidylate kinase [Spirochaeta thermophila DSM 6192] Length = 174 Score = 43.9 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 52/212 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 + I+ G G G +T ++ L + NY + G P + + S D + Sbjct: 1 MIIAISGKSGCGNSTVSRMVAERLGLRWINYTFRNIAQERGVPFEQILKEAQESPKWDLY 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ + L EG +L R ++L Sbjct: 61 ----------------LDERQKTFLEEGDCVLGSR---------------LAIWL----- 84 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 P + L P+D+ +R++ R L+ + +D + + + + Sbjct: 85 ----APPPAFKVYLFAPLDVRARRIRKREGGTFEEVLEKTKARD----RRDAERYRALYG 136 Query: 183 NQPDRC-----HIVDSA-HSFQSVATNILNIV 208 DR ++D+ + + + I+ V Sbjct: 137 IDIDRYEEVADLVIDTTELTPEEITERIVGAV 168 >gi|299116916|emb|CBN75026.1| flagellar adenylate kinase [Ectocarpus siliculosus] Length = 244 Score = 43.5 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 68/210 (32%), Gaps = 42/210 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T +L+ + Y D+ G+ A + + Sbjct: 61 GGPGSGKGTQCALIAEE-EALGYAHLSAGDLLRAERNSGSELAGMINEFIREGKIVP--- 116 Query: 65 EAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++R A+ + GK S + G + +L Sbjct: 117 -----------AEVTVGLLRKAMEKSGK---------SRFLIDGFPRNPDNLA-AWEAST 155 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180 + V+ D + LD P +I +R+ R + + I ++ R+ + I Sbjct: 156 AGGAVVVDFALFLDCPEEIMTERIMERGRSSG-----RIDDNEEAIRKRLVTYRESTMPI 210 Query: 181 ARNQPDRCHI--VDSAHSFQSVATNILNIV 208 + R + V+S + + VA + + Sbjct: 211 IKEFEARGKLREVNSDQTIEEVAVEVRRHI 240 >gi|116694577|ref|YP_728788.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Ralstonia eutropha H16] gi|113529076|emb|CAJ95423.1| sulfate adenylyltransferase subunit 1,adenylylsulfate kinase [Ralstonia eutropha H16] Length = 644 Score = 43.5 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 44/166 (26%) Query: 7 IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G+ GAGK+T +L+++ L + + LL G Sbjct: 476 IVWFTGLSGAGKSTIANLVEKRLHALGHHTY-----------------LLDGDNVRHGLN 518 Query: 66 AEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + A R++ V V R L G I+L ++ S + + + Sbjct: 519 KDLGFAEADRVENIRRVAEVARLMLDAGLIVL--------VSFISPFRSEREMA----RA 566 Query: 123 ISVQEVMPDCT-IILDLPVDIGLK-------RVQNRYSLRESACLD 160 ++ D + +D P+ + + R R L+ +D Sbjct: 567 LAGDG---DFVEVFIDTPLAVAEQRDPKGLYRKARRGELKNFTGID 609 >gi|57753877|dbj|BAD86807.1| hypothetical protein [Streptomyces sp. KO-3988] Length = 260 Score = 43.5 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 14/174 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDEF 62 F G + AGK++ ++ L + + T + G R ++ + Sbjct: 57 FYVLLGPDYAGKSSVMTELSAAMP--GWQTLSTDDDLVAGEHRLISQLRRNVVRDVLPGL 114 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDS 119 G A F A+ L +R L + +L D + A + L + Sbjct: 115 GPTYSAD-FLASLLGTAVVHLRDQLERQEPDVPVLMDSYYYKILA----KCRLAGLEMHP 169 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEK 172 L +P I LD+ + +R L D E ++K Sbjct: 170 LYTWWRSFPLPRGVIYLDVSPETAWRRSGRGAQLNPLEHFGDRPEWFGFESYQK 223 >gi|71408482|ref|XP_806642.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|42560502|gb|AAS20418.1| adenylate kinase 4 [Trypanosoma cruzi] gi|70870447|gb|EAN84791.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 260 Score = 43.5 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 57/221 (25%), Gaps = 48/221 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G GAGK T + + DV T E + + +E Sbjct: 58 GPSGAGKRTQSRRIAQKYGAVVVNADDVFREEMSKETKEGEKVANCMREGIPVPHDVASE 117 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 I + + +L + ++L + Sbjct: 118 LI---------IRRLKMEDANSNGWVL---------------NGFPRTRSEAL-RLQTAG 152 Query: 128 VMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY-FERKDVMIHEK 172 + P I+LDLP ++ ++R R E ++ FE D + Sbjct: 153 ISPLFFILLDLPYEVAVQRCNGRRYDPITQNVYHMEFCPPPEGMAVERMFEDDDSLAAVV 212 Query: 173 RRQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 R + ++ +D V+ I V Sbjct: 213 SRWKYFDARKDELIECYEPVFVRIDGNRPVDVVSQEIFEQV 253 >gi|149199203|ref|ZP_01876241.1| sulfate adenylyltransferase, large subunit subfamily, putative [Lentisphaera araneosa HTCC2155] gi|149137628|gb|EDM26043.1| sulfate adenylyltransferase, large subunit subfamily, putative [Lentisphaera araneosa HTCC2155] Length = 514 Score = 43.5 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 20/97 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G + F G+ G+GK+T L L + V+ L Sbjct: 342 HKGCVLWFTGLSGSGKSTIAKALMAELHAQGKHVNS-----------------LDGDNVR 384 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 FG ++ A R +++ + + + G I+LC Sbjct: 385 FGLCSDLGFTAKDRSENIRRIGELAKLFMENGNIVLC 421 >gi|78780016|ref|YP_398128.1| adenylate kinase [Prochlorococcus marinus str. MIT 9312] gi|78713515|gb|ABB50692.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9312] Length = 182 Score = 43.5 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 75/214 (35%), Gaps = 43/214 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 M L F G GAGK T LL + +L ++ T + ++ Sbjct: 1 MKKHLL--FLGAPGAGKGTQAELLSKTNSYLHLSTGELLRKEIETNTNLGRQVKDII--N 56 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + V ++R L + + + G + Sbjct: 57 RGELVSD------------ELVLKIVRQNLDQD---------NKGWILDGYPRNLSQA-- 93 Query: 118 DSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ- 175 +SL E+ ++ P + LD+P ++ +KR+ R ++ V I++K + Sbjct: 94 NSLNEVLIEINQPLEVVFYLDIPEEVLIKRLLLRGRKDDTEETIR---TRVDIYKKTTEP 150 Query: 176 ---IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 F D++ + +D+ ++++++I Sbjct: 151 LIKYFKDLSLLEY-----IDADRDLKTISSDIKQ 179 >gi|312217166|emb|CBX97115.1| similar to UMP-CMP kinase [Leptosphaeria maculans] Length = 227 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 45/214 (21%) Query: 11 GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREP---GGTPAAEAARHVLLSCGVDEF 62 G GAGK T L + L + + RE G+ E + + + Sbjct: 29 GGPGAGKGTQCQNLVSDYGFKHLSAGD----LLREEQDRPGSEFGEMIKTYIKEGTIVPM 84 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEG----KILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + EN ++ ++ G K+ L D F LD Sbjct: 85 EVTIKLL----------ENAMKASMESGQNEKKLFLIDGF---------------PRKLD 119 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 T+ D + KR+ +R D E + + Sbjct: 120 QAHAFERSVCPSKFTLFFDCSEAVMEKRLLHRGET-SGRADDNLESIKKRFRTFV-ETSM 177 Query: 179 DIARNQP--DRCHIVDSAHSFQSVATNILNIVWE 210 + + R V++ S + V ++ + E Sbjct: 178 PVVKEFESQGRVVKVNAERSPEEVYRDVQEKLKE 211 >gi|167628073|ref|YP_001678573.1| cytidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167598074|gb|ABZ88072.1| Cytidylate kinase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 222 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 64/239 (26%), Gaps = 45/239 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKN----YDVHVTREPGGT-----PAA 47 MN+ I+ +G G GK T L ++ L G Sbjct: 1 MNNSKIITVDGPSGVGKGTLSKKLAKYFDYKLLDSGAIYRIAALHCYNAGANLDNQDDVC 60 Query: 48 EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 L ++ A + L + AY Sbjct: 61 NKLES--LDISFKVENDSIIVLLNNADVTKAIRTEQTGMLAS-----------KTSAYPK 107 Query: 108 ERDSSQHLFL--DSLQEISVQE------VMPDC--TIILDLPVDI-GLKRVQNRYSLRES 156 R L + + V PD LD ++ +R + E+ Sbjct: 108 VRQMLHDKMLSFATAAGLVADGRDMGTVVFPDAKYKFFLDASSEVRAQRRYDELLTKGEN 167 Query: 157 ACLDYF--ERKDVMIHEKRRQIFLDIARNQP-DRCHIVD-SAHSFQSVATNILNIVWEL 211 D + + ++ R +A +P D +VD S S + V +L+ + L Sbjct: 168 PDFDKIKNDIEQRDFQDRNR----KVAPLKPADDAILVDTSNLSIEEVFQKVLSHINNL 222 >gi|159904596|ref|YP_001548258.1| signal recognition particle-docking protein FtsY [Methanococcus maripaludis C6] gi|159886089|gb|ABX01026.1| signal recognition particle-docking protein FtsY [Methanococcus maripaludis C6] Length = 379 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 15/126 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI G GKTT IS L L+ + Y V + G T A A + + + Sbjct: 179 GINGTGKTTSISKLAYILKERGYSVVMAA--GDTFRAGAIEQLEEHGKNTDI--KVIKHQ 234 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 A + + I + +G ++L D R ++ +D +++ V+ Sbjct: 235 KGADSAAVIYDAINHSKAKGINVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 284 Query: 130 PDCTII 135 PD I Sbjct: 285 PDLIIF 290 >gi|50555588|ref|XP_505202.1| YALI0F09339p [Yarrowia lipolytica] gi|49651072|emb|CAG78009.1| YALI0F09339p [Yarrowia lipolytica] Length = 212 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 48/213 (22%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T L L + + RE P ++ + + + + Sbjct: 26 GGPGAGKGTQCEKLVNEYGFVHLSAGD----LLREEQSRPNSQYGKLIADCIKAGDIVPQ 81 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++N ++ ++ +GK RFL G L ++++V Sbjct: 82 E-------VTIGLLKNAMKESVAKGKT----RFLID-----GFPRKMDQA-LKFEEDVAV 124 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182 + T+ + P ++ LKR+ R D E R+ F+ Sbjct: 125 SKF----TLFFECPEEVMLKRLLKRGET-SGRTDDNIES--------IRKRFVTFIETSM 171 Query: 183 ------NQPDRCHIVDSAHSFQSVATNILNIVW 209 DR +VD V N+ + + Sbjct: 172 PVVDYFETQDRVVVVDCKQDPDVVYDNVKDALH 204 >gi|71653446|ref|XP_815360.1| adenylate kinase [Trypanosoma cruzi strain CL Brener] gi|42560504|gb|AAS20419.1| adenylate kinase 5 [Trypanosoma cruzi] gi|70880410|gb|EAN93509.1| adenylate kinase, putative [Trypanosoma cruzi] gi|322816045|gb|EFZ24496.1| adenylate kinase, putative [Trypanosoma cruzi] Length = 198 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 61/216 (28%), Gaps = 47/216 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G G+GK T L + + A + R S D AE Sbjct: 12 FLGGPGSGKGTACDYLVKEF---GF--------THFSAGDLLREASKSNKSDVEKKIAEI 60 Query: 69 IVF-----AAARLDHVENVI-RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 I + ++ + N I G I+ G + Sbjct: 61 IRMGNIVPSEITVELLSNAIAEHPNPRGYII------------DGFPRKMDQALMFE--- 105 Query: 123 ISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVMIHEKRRQ 175 + + P D + RV +R D E R +V + + Sbjct: 106 ---EGIAPAKGIFYFDCHEETMEARVLHRAKEGSGRDDDDIEVLRRRFRTNVELCMPVVE 162 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +R H +D+ S + V ++ ++ +L Sbjct: 163 RY-----KAENRLHTIDANRSREEVYGDVKRVMLQL 193 >gi|262089273|gb|ACY24494.1| putative thymidylate kinase [uncultured crenarchaeote 57a5] Length = 108 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 15/105 (14%), Positives = 40/105 (38%), Gaps = 11/105 (10%) Query: 126 QEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACL-------DYFERKDVMIHEKRRQIF 177 + P+ +P+DI + R+ R L+ D +E + + + Sbjct: 3 FAIKPEIVFYFKVPIDIAVDRILAGRPRLKYYEAGMDLNLSNDPYESYRI-FQSRIIDQY 61 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 ++ + + IVD + + + +IV +L+ ++ + + Sbjct: 62 ESLSIS--ENFTIVDGTMEIEESQSYLRSIVSKLLPLNITKNTRR 104 >gi|229011814|ref|ZP_04168995.1| uridine kinase [Bacillus mycoides DSM 2048] gi|228749445|gb|EEL99289.1| uridine kinase [Bacillus mycoides DSM 2048] Length = 189 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 17/88 (19%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183 D TI +D P+DI + R R D+ E IH R+ +L+ Sbjct: 104 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 154 Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D + S + I+ + Sbjct: 155 VKPNSDIVLDGSLSISEIIDQIIEELNR 182 >gi|254409923|ref|ZP_05023703.1| Adenylate kinase superfamily [Microcoleus chthonoplastes PCC 7420] gi|196182959|gb|EDX77943.1| Adenylate kinase superfamily [Microcoleus chthonoplastes PCC 7420] Length = 204 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 68/232 (29%), Gaps = 67/232 (28%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDEFGAE 65 G G+GK+T L R L + R + L + + Sbjct: 4 GGPGSGKSTQARQLCRHL---GIVEI--------SSGNILRRAIAAQTDLGRKAQPYVEK 52 Query: 66 AEA----IVFAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I+ R +E + ++ ++EG A+Q E L+ Sbjct: 53 GELVPDEILIEFMRQRLLEPDTVKGWVLEG---------YPRTAFQAEELDFLLEDLNQQ 103 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----------------DYFE 163 + + I L +P + + R RY E D+ E Sbjct: 104 LDWA---------IYLTVPESVMMTRSVARYVPSEQTPPTQNQAQDSTPSTKSRLDDHPE 154 Query: 164 ---RKDVMIHEK---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 R+ + +E+ + + + + ++ + V NI + + Sbjct: 155 IVPRRIQLFYERTVPILEYY-----DYRQKLLTINGDQPPEQVQQNIWHKLE 201 >gi|326528033|dbj|BAJ89068.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 213 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 63/222 (28%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 34 GGPGSGKGTQCANIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 73 Query: 71 FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114 +I + EGKI+ D+FL + R+ Sbjct: 74 ----------TMIENMIKEGKIVPSEVTIKLLQQAMIKNENDKFLIDGF----PRNEENR 119 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 +++ +IS P + + + +R+ R R ++ ++ + E Sbjct: 120 AAFENVTKIS-----PAFVLFFNCSEEEMERRLLGRNEGRVDDNIETIRKRFKVFVESSL 174 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + + D+ +D+A V ++ I + Sbjct: 175 PVIEYY-----DAKDKVKKIDAAKPIPEVFEDVKAIFAPFAK 211 >gi|326516732|dbj|BAJ96358.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 277 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 42/152 (27%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L R L + + + +L Sbjct: 98 QKGCVIWITGLSGSGKSTVACALSRELHYRGHHTY-----------------VLDGDNLR 140 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117 G + A R +++ V + G I + S + Y+ +RD Sbjct: 141 HGLNRDLSFKAEDRTENIRRVGEVAKLFADAGTICIA-----SLISPYRRDRD------- 188 Query: 118 DSLQEISVQEVMPD---CTIILDLPVDIGLKR 146 + + ++PD + +DLP++I R Sbjct: 189 ------ACRALLPDSRFIEVFMDLPLEICEAR 214 >gi|71417267|ref|XP_810517.1| adenylate kinase [Trypanosoma cruzi strain CL Brener] gi|70875059|gb|EAN88666.1| adenylate kinase, putative [Trypanosoma cruzi] Length = 198 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 31/215 (14%), Positives = 59/215 (27%), Gaps = 45/215 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G G+GK T L + + A + R S D E Sbjct: 12 FLGGPGSGKGTACDYLVKEF---GF--------THFSAGDLLREASKSNKSDVEKKITEI 60 Query: 69 IVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 I + ++ + N I ++ G + Sbjct: 61 IRMGNIVPSEITVELLSNAIAEHPNPRGYVI-----------DGFPRKMDQALMFE---- 105 Query: 124 SVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFE------RKDVMIHEKRRQI 176 + + P D + RV +R D E R +V + + Sbjct: 106 --EGIAPAKGIFYFDCHEETMEARVLHRAKEGSGRDDDDIEVLRRRFRTNVELCMPVVER 163 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +R H +D+ S + V ++ ++ +L Sbjct: 164 Y-----KAENRLHTIDANRSREEVYGDVKRVMLQL 193 >gi|302842953|ref|XP_002953019.1| adenylate kinase [Volvox carteri f. nagariensis] gi|300261730|gb|EFJ45941.1| adenylate kinase [Volvox carteri f. nagariensis] Length = 231 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 66/205 (32%), Gaps = 36/205 (17%) Query: 7 ISF-EGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 I F G G+GK T + + D+ GT + ++ S + Sbjct: 6 IVFVLGAPGSGKRTQCEKIVENYGWTHLSTGDLLREEVLAGTELGQQVNEIMASGQMVPT 65 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E + A A G RFL + LD L E Sbjct: 66 DLILEMLTNAMA-------------SSG----SSRFLIDGF----------PRTLDQLME 98 Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIFLD 179 Q V P D ++ +P ++ ++R+ R S R D R+ + + Q ++ Sbjct: 99 FQTQ-VKPCDGVLVFSVPEEVAVERLLARGVTSGRVDDNEDAI-RERMNLFWSDSQPVIE 156 Query: 180 IARNQPDRCHIVDSAHSFQSVATNI 204 + H VDSA + V + Sbjct: 157 FLADSGGNLHEVDSAAPEEEVFAAV 181 >gi|289450230|ref|YP_003475458.1| signal recognition particle protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184777|gb|ADC91202.1| signal recognition particle protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 452 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 18/154 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTT + L + L+ + VT PAA ++L + + Sbjct: 109 GLQGSGKTTTAAKLGKILKSRGKKPLVTSVDTHRPAAAEQLNIL--------CDKIQVPC 160 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + H + R A+ K LLCD + R + + L+E+ V P Sbjct: 161 YINPPEKHAAKIAREAVERAKYLLCD----TLIVDTAGRMTIDEELMQELKELE-NTVKP 215 Query: 131 D--CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 D I + IG + V LD F Sbjct: 216 DERLLI---VDSMIGQEAVNIALEFERQIGLDGF 246 >gi|148655316|ref|YP_001275521.1| nucleoside-triphosphate--adenylate kinase [Roseiflexus sp. RS-1] gi|148567426|gb|ABQ89571.1| Adenylate kinase [Roseiflexus sp. RS-1] Length = 226 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 39/162 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T ++L+ VHV + R L A++ Sbjct: 3 IILLGAPGAGKGTQ----AKYLEEHTGMVHVAS-------GDLFRAALRQGTELGMLAKS 51 Query: 67 EAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 R + V E + +P G ++ D F R Q Sbjct: 52 -----YMDRGELVPDEVVIRMIVERISQPDCSRG--VIFDGF---------PRTREQARA 95 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 L++ E++ Q D + + +P D+ L+R+ R + + Sbjct: 96 LEA--ELNKQGRRIDVVLYIRVPEDMLLRRIAGRQTCKTCGS 135 >gi|145588521|ref|YP_001155118.1| adenylyl-sulfate kinase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046927|gb|ABP33554.1| Adenylyl-sulfate kinase [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 195 Score = 43.5 bits (102), Expect = 0.020, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 14/94 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G I F G+ GAGK+T + L+ L + + + R L Sbjct: 27 QTGKIIWFTGLSGAGKSTLANALEIQLHEQGKQTFLL-------DGDVVRQGLNQDLGFS 79 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 E R+ HV ++ A G I++C Sbjct: 80 DQDRTE----NIRRIAHVAKLMMDA---GLIVIC 106 >gi|307637305|gb|ADN79755.1| Adenylate kinase [Helicobacter pylori 908] gi|325995896|gb|ADZ51301.1| Adenylate kinase [Helicobacter pylori 2018] gi|325997491|gb|ADZ49699.1| Adenylate kinase [Helicobacter pylori 2017] Length = 191 Score = 43.5 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVEAILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D + V H + R +FL Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D +A ++ S + + + + Sbjct: 151 DPLAEIQNFYKNKKVYKAINGERSIEEIVNEMQKYILSF 189 >gi|168024344|ref|XP_001764696.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683990|gb|EDQ70395.1| predicted protein [Physcomitrella patens subsp. patens] Length = 352 Score = 43.5 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 15/175 (8%) Query: 9 FEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 EG GK+T + + L+ ++ V G A H +L E A Sbjct: 49 VEGNISVGKSTFLQRIASETLELQDLVEIVPEPVGKWQDVGANHHNILESFYKEPERYAY 108 Query: 68 AI---VFAAARLDHVE--NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSL 120 VF + E + I+P + + + DR + ++ + S + + Sbjct: 109 TFQNYVFVTRLMQERESAHGIKPLRLMERSVFSDRMVFVRAVHEAKWMSEMEISIYDSWF 168 Query: 121 QEIS--VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEK 172 + + ++PD I L D ++R+ +R E+ L+Y + +HEK Sbjct: 169 NPVVSELPGLVPDAFIYLRASPDTCMQRLHSRKRPEENGVSLEYLQ----GLHEK 219 >gi|197123620|ref|YP_002135571.1| ABC transporter [Anaeromyxobacter sp. K] gi|196173469|gb|ACG74442.1| ABC transporter-related protein [Anaeromyxobacter sp. K] Length = 310 Score = 43.5 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 47/245 (19%), Positives = 68/245 (27%), Gaps = 58/245 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGVDEF--GAEAE 67 G +GAGKTT I L L + V G P + A R L L E Sbjct: 47 GPDGAGKTTAIRALAGLLALDGGEAQV---LGADPLSGANRERLGLMPQQYSLYRDLTVE 103 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLC--DRFLD------SSYAY-------------- 105 + ARL + + E + + DRF D S Y Sbjct: 104 ENLHFFARLYVLPRAVYRERKERLLGITRLDRFTDRRADALSGGMYKKLALACALLHEPE 163 Query: 106 --------QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLP--------VDIGL-KRVQ 148 G S+ L E T+++ P + L R + Sbjct: 164 VLLLDEPTNGVDPVSRRELWALLHEFVHGG----MTVLVSTPYMDEAERCSRVALVHRGR 219 Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP---------DRCHIVDSAHSFQS 199 A + FE + +H R+ P R +V + + Sbjct: 220 ALLDGEPGALIARFEDEAYEVHGGDRERLDAALAAHPAVLAASPAGARLKVVVARGARDE 279 Query: 200 VATNI 204 VA I Sbjct: 280 VARAI 284 >gi|328880628|emb|CCA53867.1| Deoxyadenosine kinase or Deoxyguanosine kinase [Streptomyces venezuelae ATCC 10712] Length = 220 Score = 43.5 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 47/164 (28%), Gaps = 34/164 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKT+ L+ R L +V P + + +E A+ + Sbjct: 11 GIGKTSVAELIARDL---GSEVFYES-VDDNPILP----LFYTASPEEIQAKRYPFLLQL 62 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGERDSSQHLFLD 118 L I+ A +G +L DR + SS Q + + Sbjct: 63 YFLQTRFAAIKEAYKQGDNVL-DRSIYEDWYFAKVNHDLGRISSLEMQVYEGLLDEMMRE 121 Query: 119 SLQEISVQEV----MPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 + + PD + L + L R+ R E Sbjct: 122 ------IDGLPYRKAPDLMVYLKADFETVLHRIGLRGRDFEQDE 159 >gi|156378247|ref|XP_001631055.1| predicted protein [Nematostella vectensis] gi|156218088|gb|EDO38992.1| predicted protein [Nematostella vectensis] Length = 4294 Score = 43.5 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 25/118 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T LL+ L + V T P P + + E+ Sbjct: 1984 VVI-GPSGSGKSTIWRLLRLALGKIGQTVKQYTMNPKAMPRTQLLGQI--DMDTREWSDG 2040 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ AAR V+R + ++CD +++SL + Sbjct: 2041 ---VLTNAAR-----QVVREPIDIQSWIICD-------------GDIDPEWIESLNSV 2077 >gi|332159482|ref|YP_004424761.1| cytidylate kinase [Pyrococcus sp. NA2] gi|331034945|gb|AEC52757.1| cytidylate kinase [Pyrococcus sp. NA2] Length = 192 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 48/218 (22%) Query: 1 MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+ G+ G+G TT + + A R + G+ Sbjct: 1 MPKGKLVITVSGLAGSGTTTLSKKIAEY---YGLKHVY--------AGLIFRQMAKERGM 49 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A + + V+ A EG +++ E + + ++ Sbjct: 50 TLEEFQKYAELHPEIDRE-VDRRQIEAAKEGNVVI-------------EGRLAGWMVKNA 95 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178 D I LD P+ + +RV R + ER+ + R+ +L Sbjct: 96 -----------DLKIWLDAPIRVRAERVAKREGISVEEAFMKIAERE-----MQNRKRYL 139 Query: 179 DIARNQPDRC----HIVDSAH-SFQSVATNILNIVWEL 211 ++ + I+++A S + V + + L Sbjct: 140 NLYGIDINDLSIYDLIINTAKWSPEGVFAIVKAAIDHL 177 >gi|322368143|ref|ZP_08042712.1| signal recognition particle-docking protein FtsY [Haladaptatus paucihalophilus DX253] gi|320552159|gb|EFW93804.1| signal recognition particle-docking protein FtsY [Haladaptatus paucihalophilus DX253] Length = 372 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 56/156 (35%), Gaps = 18/156 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAE 65 I F G+ G GKTT I+ L R+ + + Y + A + R D + Sbjct: 174 IIFTGVNGVGKTTSIAKLSRYFEERGYSSVMANGDTYRAGANQQIRE-----HADALDTK 228 Query: 66 AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A + + + A I+L D R + +D L++I Sbjct: 229 LIAHEQGGDPAAVIYDAVEYADAHDIDIVLGD---------TAGRLHTSEGLMDQLEKIG 279 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + V PD TI +D G VQ E+A +D Sbjct: 280 -RVVDPDMTIFVD-EAVAGQDAVQRAKEFDEAAEID 313 >gi|320195134|gb|EFW69763.1| hypothetical protein EcoM_02899 [Escherichia coli WV_060327] Length = 256 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 27 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 87 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + +D + R Sbjct: 146 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 197 >gi|118380994|ref|XP_001023659.1| hypothetical protein TTHERM_00732610 [Tetrahymena thermophila] gi|89305426|gb|EAS03414.1| hypothetical protein TTHERM_00732610 [Tetrahymena thermophila SB210] Length = 1342 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 14/82 (17%) Query: 7 ISF-EGIEGAGKTTHI-SLLKRFLQRKNYDVHVTREPGGT---PAAEAARHVLLSCGVDE 61 I+ +G G+GKTT ++ +L+ N + VT E GT E + + Sbjct: 920 ITIVQGPPGSGKTTAAVEIVLEWLRASNQPILVTAESQGTVNIIYGELIKA---NVKAVT 976 Query: 62 FGAEAEAIVFAAARLDHVENVI 83 G E RLDH+ +I Sbjct: 977 IGPGFE------DRLDHINEII 992 >gi|268611362|ref|ZP_06145089.1| hypothetical protein RflaF_17914 [Ruminococcus flavefaciens FD-1] Length = 186 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 21/158 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI EG G GKTT S+L ++ N++ AE + Sbjct: 1 MFIVIEGDNGTGKTTVASILN---KKHNFEFIT----EHPDIAELEKQA--KGFDIGSIK 51 Query: 65 EAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH--LFLDSLQ 121 EA + + A + + I+ L R+ S+ A G D L Sbjct: 52 RFEAFLDYNRACGEQSKKHIKSVLA--------RYWISTIA-AGYADKLFDINESLTRAD 102 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 + PD L + ++R++ R + + Sbjct: 103 SVIKTMPRPDHIFRLKCSFEKRIERIEQRALSDGNDDI 140 >gi|262285067|gb|ACY41095.1| thymidine kinase [Wood mouse herpesvirus] Length = 647 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 39/239 (16%), Positives = 71/239 (29%), Gaps = 60/239 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-------EAARHVLLSCGVDE 61 F+G G GKTT + FL +++ V EP + + V+ + + Sbjct: 334 FDGGIGVGKTTALEAAAEFL----HNILVIPEPIPYWTSTFDKNVCQQIYDVVRTKEKGK 389 Query: 62 FGA-------EAEAIVFAAARLDHVENVIRPALMEGK---ILLCDRFLDSSYA-----YQ 106 + A A F A + + + +G +L DR + S + Sbjct: 390 KHSKKVLQCQMAFAQPFFATQHLLRRTCLGTKVSDGTCNNHVLIDRHMMSPTVLFPCLFF 449 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + L S Q D I+ L + + R++ R E Sbjct: 450 RLGVLKFGDLISLLSMFSAQCF--DNIILFKLNPRVAVTRIKERGRNPEGV--------- 498 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAH---------SFQSVATNILNI--VWELVQK 214 +L + +VD+ + + IL+ V + QK Sbjct: 499 ------INHGYLKLLNE------VVDAIFCAWELLAIVPPEVIVEAILSQTPVKRIFQK 545 >gi|239948298|ref|ZP_04700051.1| adenylate kinase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922574|gb|EER22598.1| adenylate kinase [Rickettsia endosymbiont of Ixodes scapularis] Length = 212 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ +L + + Y G + + + Sbjct: 45 EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFV 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KRV RYS + + DY Sbjct: 101 KEKIK---IIYFDVSDELLIKRVLGRYSCKNCGKIYNSYFLQPKTDNVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IV+ + + Q + +I I+ Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210 >gi|323188586|gb|EFZ73871.1| hypothetical protein ECRN5871_3005 [Escherichia coli RN587/1] Length = 252 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193 >gi|296170074|ref|ZP_06851677.1| sulfate adenylate transferase/adenylyl-sulfate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895284|gb|EFG74994.1| sulfate adenylate transferase/adenylyl-sulfate kinase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 230 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 52/148 (35%), Gaps = 17/148 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T +L+++ L + + A +L E Sbjct: 23 HRGCVIWFTGLSGSGKSTVANLVEQKLYERGVRSFLLDGDNVRYGLNAGPGILEERHGSE 82 Query: 62 FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 F A R +++ + + G I L A+ + Sbjct: 83 FAQRFGLGFSAQDREENIRRIGAVSKLFCEAGVIALT--------AFISPYRRDRDAVRA 134 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 +L + QE I +D P+++ +R Sbjct: 135 TLSDGDFQE------IFIDTPIEVCEQR 156 >gi|328478173|gb|EGF48017.1| adenylate kinase [Lactobacillus rhamnosus MTCC 5462] Length = 214 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 72/239 (30%), Gaps = 73/239 (30%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T ++ T + R + G EA+ + Sbjct: 7 GLPGAGKGTQAERIED-----------TYPIAHISTGDMFRAAM--AAGTALGKEAKGFI 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + V + + +++ ++ D D+ Y G + Q ++L+ I+ P Sbjct: 54 ---DKGQLVPDSVTNGIVKERLAESD--TDAGYMLDGFPRTIQQA--EALETITADLKKP 106 Query: 131 -DCTIILDLPVDIGLKRVQNR--------------------YSLRESACLDYFERKD--- 166 D I +D+ + R+ R + ++F+R+D Sbjct: 107 LDAVINIDVAPAKLVDRLSGRFICKTCGATYHKIYNPPKVAGTCDRCGGHEFFQREDDKP 166 Query: 167 -----------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++K + L H V+ V +I I+ Sbjct: 167 ETVKNRLKVNIAMNTPLLDFYQK--KGLL----------HTVNGDQDIDKVFADIKTIL 213 >gi|67458691|ref|YP_246315.1| adenylate kinase [Rickettsia felis URRWXCal2] gi|75536847|sp|Q4UMQ8|KAD_RICFE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|67004224|gb|AAY61150.1| Adenylate kinase [Rickettsia felis URRWXCal2] Length = 212 Score = 43.5 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 81/233 (34%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ +L + + Y G + + + Sbjct: 45 EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KRV RYS + + DY Sbjct: 101 KEKIK---IIYFDVSDELLIKRVLGRYSCKNCGKIYNSYFLQPKTDNVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IVD + + Q + +I I+ Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVDGSKNEQEIEIDIQKILK 210 >gi|315226179|ref|ZP_07867967.1| deoxyguanosine kinase [Parascardovia denticolens DSM 10105] gi|315120311|gb|EFT83443.1| deoxyguanosine kinase [Parascardovia denticolens DSM 10105] Length = 253 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 24/162 (14%) Query: 15 AGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VF 71 AGK+T +L L + P ++ + A + V+ Sbjct: 21 AGKSTLTQILSDEL---GTKAFFEPVEDNPVLPLFYHGNKLVEEGKAET-NPYAFLLQVY 76 Query: 72 AAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQH-----LFLDSL 120 R + I+ A+ E +L DR + DS + QG + L + L Sbjct: 77 FLNRRFAM---IKKAMQEDNNIL-DRSIYEDSIFMKMNTDQGHATEEEWNIYKSLLDNML 132 Query: 121 QEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 +E+ + ++ PD I +D+ ++ L RV+ R E D Sbjct: 133 EELPYAAKKKSPDLMIFVDVNLETMLYRVKKRGRPFEQVDED 174 >gi|188592308|ref|YP_001796906.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Cupriavidus taiwanensis LMG 19424] gi|170938682|emb|CAP63669.1| bifunctional enzyme: ATP-sulfurylase large subunit (Sulfate adenylate transferase)(SAT) and Adenylyl-sulfate kinase (APS kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) [Cupriavidus taiwanensis LMG 19424] Length = 640 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 51/173 (29%), Gaps = 58/173 (33%) Query: 7 IS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G+ GAGK+T +L+++ L + + LL G Sbjct: 472 IVWFTGLSGAGKSTIANLVEKRLHALGHHTY-----------------LLDGDNVRHGLN 514 Query: 66 AEAIVFAAARLD---HVENVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQH 114 + A R++ V V R L G I+L +R A D Sbjct: 515 KDLGFSEADRIENIRRVAEVARLMLDAGLIVLVSFISPFRSER----EMARALAGDGEFI 570 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLK-------RVQNRYSLRESACLD 160 + +D P+ + + R R L+ +D Sbjct: 571 E------------------VFIDTPLAVAEQRDPKGLYRKARRGELKNFTGID 605 >gi|149020738|gb|EDL78543.1| rCG31851, isoform CRA_b [Rattus norvegicus] Length = 2120 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL Sbjct: 1342 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 1394 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++ +AR V+R ++CD +++SL Sbjct: 1395 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 1436 Query: 121 QEI 123 + Sbjct: 1437 NSV 1439 >gi|326925200|ref|XP_003208807.1| PREDICTED: adenylate kinase isoenzyme 5-like [Meleagris gallopavo] Length = 602 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 29/231 (12%), Positives = 68/231 (29%), Gaps = 48/231 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 FI G G+GK++ L + L D+ + ++ + ++ Sbjct: 409 FFIV--GGPGSGKSSQCEQLAKKYGFTHLSAA--DLLQNELSSLSERSKFIKDIMECGEP 464 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G E + + + +L + K L D + L Sbjct: 465 VPGGIVLELL----------KEAMITSLEDTKGFLIDGY---------------PRELKE 499 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +E + P LD + R R + + + ++ + + + Sbjct: 500 AEEFESKIGEPKLVFCLDCSAESMNSRSLMRNQTSQHSNAETI-KEGI-------EGYYQ 551 Query: 180 IAR---NQPDR---CHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 A+ +R VD+ + + V + + + K + S++ Sbjct: 552 AAKPLTAYYERKTQLCKVDAEGTAEDVFLEVCKSIDSFLNKEAAAFSTETQ 602 >gi|313212897|emb|CBY36805.1| unnamed protein product [Oikopleura dioica] Length = 329 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 45/254 (17%), Positives = 85/254 (33%), Gaps = 56/254 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP----------GGTPAAEAARHVLLS 56 IS EG GK+T I +L+ +++++ T EP G+ + + Sbjct: 44 ISIEGNIATGKSTFIKILEEAAGTEDWEI--TPEPVSTWTQIEGKNGSSSGGNLLKLFYD 101 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + + RL +P A + + + DR++ +A Sbjct: 102 DAKRWSYTFQSFALLSRMRLQRA--PFKPRTVARLSERSIHSDRYI---FARNCFETGLM 156 Query: 114 HL------------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLD 160 L+SL ++ + I L + KR+ R E L+ Sbjct: 157 TETEWSIYKDWSTYLLESLGDLQLDGF-----IYLRCDPKVCDKRMAKRGRPEEQGVTLE 211 Query: 161 YF----ERKDVMIHEKRRQIFL--DIARNQPDRCHIVDSAHSF---QSVA----TNILNI 207 Y E+ + +H + F DI ++ P +D F + + + Sbjct: 212 YLSQLHEKHEKWLHNR---EFHDEDIMQDIP--ILEIDCNEEFHDDEEIKSKMLQQVREF 266 Query: 208 VWELVQKRVSPLSS 221 V ++ +KR LSS Sbjct: 267 VRQVQEKRQEKLSS 280 >gi|73662526|ref|YP_301307.1| putative shikimate kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82592633|sp|Q49XY2|AROK_STAS1 RecName: Full=Shikimate kinase; Short=SK gi|72495041|dbj|BAE18362.1| putative shikimate kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 170 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 8/76 (10%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 I LD ++I KR++N + + FE K + + + +IA V+ Sbjct: 100 VIWLDCDIEILYKRIKNDSNRPNANNKSLFELKSL-YSSRV-SRYNEIA------FIKVN 151 Query: 193 SAHSFQSVATNILNIV 208 S+ S + +I+ + Sbjct: 152 SSQSLSDLQNDIMEAI 167 >gi|15617021|ref|NP_240234.1| adenylylsulfate kinase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11386736|sp|P57497|CYSC_BUCAI RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|25287561|pir||H84978 adenylyl-sulfate kinase (EC 2.7.1.25) [imported] - Buchnera sp. (strain APS) gi|10039086|dbj|BAB13120.1| adenylylsulfate kinase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 206 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 36/145 (24%) Query: 7 IS--FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I F G+ G+GK+T + L+ L + + LL G Sbjct: 30 IVLWFTGLSGSGKSTIANFLEEILFKNGIN-----------------SYLLDGDNIRSGL 72 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ A R +++ V++ L G I+L + S Y Q E + L+ Sbjct: 73 CSDLSFSLADRNENIRRIGEVVKMMLHAGLIILV--SVISPYRNQREMVRQMLGKKNFLE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 + +D P++I R Sbjct: 131 ------------VFIDTPIEICESR 143 >gi|317179020|dbj|BAJ56808.1| adenylate kinase [Helicobacter pylori F30] Length = 191 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ + LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTKRGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V++ + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189 >gi|299138227|ref|ZP_07031406.1| Uridine kinase [Acidobacterium sp. MP5ACTX8] gi|298599473|gb|EFI55632.1| Uridine kinase [Acidobacterium sp. MP5ACTX8] Length = 239 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 72/218 (33%), Gaps = 46/218 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G G+GKTT L L+ + + R+ P L + E+ Sbjct: 45 GCSGSGKTTLARELASQLEATIFPLDLYYRDLSQIPLE------LRDKENFDDPDSLESE 98 Query: 70 VFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERD---SSQHLFLDSLQEI 123 +F ++H+ L +G + + D + A G D S++ L ++ + + Sbjct: 99 LF----VEHLRR-----LADGHTIQRPVYDFSHHTRVA--GAFDLISSARFLIVEGILAL 147 Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 E++P D ++ ++ P +I L R R E R F A Sbjct: 148 HYPELLPLYDFSLYVNAPNEICLNRRIYRDMRERGRTE-----------ESVRAQFEATA 196 Query: 182 RNQPDRCH---------IVDSAHSFQSVATNILNIVWE 210 R +R IV+ +L + + Sbjct: 197 RPMAERYVLPSQIHANLIVEGTEDLDWSIEQVLRELHK 234 >gi|196001173|ref|XP_002110454.1| hypothetical protein TRIADDRAFT_22099 [Trichoplax adhaerens] gi|190586405|gb|EDV26458.1| hypothetical protein TRIADDRAFT_22099 [Trichoplax adhaerens] Length = 4324 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 24/114 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G G+GKTT +LK L + V T P P + + E+ + Sbjct: 2005 GPSGSGKTTLWRVLKAALAKTGQVVKQYTMNPKAMPRTQLLGQI--DIDTREWSDG--VL 2060 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++A V+R + ++CD +++SL + Sbjct: 2061 TYSA------RQVVREPIEIQSWIICD-------------GDIDPEWVESLNSV 2095 >gi|50308621|ref|XP_454313.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643448|emb|CAG99400.1| KLLA0E08053p [Kluyveromyces lactis] Length = 302 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 46/217 (21%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G GAGK T + L + L + RE G+ E + + + Sbjct: 119 GGPGAGKGTQCAKLVKDFGFVHLSAGDLLRAEQARE--GSQYGELIKKCIKDGEI----- 171 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 V + AL++ I S+Y ++ Q I+ Sbjct: 172 --------------VPQEVTVALLKNAI-------TSNYNSSNKKFLVDGFPRKMDQAIT 210 Query: 125 VQE-VMP-DCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIF 177 +E ++P T+ D P I L+R+ R S R ++ +++ E + F Sbjct: 211 FEEEIVPSTMTLFFDCPEKIMLERLLQRGKTSGRIDDNIESIQKRFKTFVETSVPVVEYF 270 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + ++ V V ++ + + + K Sbjct: 271 -----EKQNKVVKVSCNQPVDEVYQHVTEAIKDKISK 302 >gi|320354675|ref|YP_004196014.1| AAA ATPase [Desulfobulbus propionicus DSM 2032] gi|320123177|gb|ADW18723.1| AAA ATPase [Desulfobulbus propionicus DSM 2032] Length = 471 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 5/69 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G EG+GKT L+ L Y V V P G+ E R V L G+D GA Sbjct: 47 KLI---GPEGSGKTLICRLIAERLSS-GYQVVVLDNPIGSFD-ELLRLVCLDLGMDPRGA 101 Query: 65 EAEAIVFAA 73 + F A Sbjct: 102 HEQTHFFEA 110 >gi|257387285|ref|YP_003177058.1| signal recognition particle-docking protein FtsY [Halomicrobium mukohataei DSM 12286] gi|257169592|gb|ACV47351.1| signal recognition particle-docking protein FtsY [Halomicrobium mukohataei DSM 12286] Length = 367 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 18/156 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L L+ + + G T A A L D Sbjct: 174 IIFTGVNGVGKTTTIAKLSERLEGQGLSTVLA--NGDTYRAGANEQ--LQKHADNLDRTL 229 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + + + A ++L D R + + L++I Sbjct: 230 ISHEQGSDPAAVIYDAVEYAEANDTDVVLGD---------TAGRLHTSDDLMAQLEKID- 279 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160 + + PD TI + + + NR E+A +D Sbjct: 280 RVIDPDMTIF--VDEAVAGQDAVNRAREFDEAAEID 313 >gi|148692981|gb|EDL24928.1| dynein cytoplasmic 2 heavy chain 1 [Mus musculus] Length = 3687 Score = 43.5 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL Sbjct: 1353 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 1405 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++ +AR V+R ++CD +++SL Sbjct: 1406 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 1447 Query: 121 QEI 123 + Sbjct: 1448 NSV 1450 >gi|289434843|ref|YP_003464715.1| hypothetical protein lse_1478 [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171087|emb|CBH27629.1| coaE [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 200 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 70/233 (30%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60 G+ G+ GK+T ++++ L + EPG AE + +LL+ G Sbjct: 6 GLTGSVATGKSTVSKMIQKAGIPLVDADIAAIKVVEPGTEGLAEIVAYFGKEILLADGSL 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ I + + + P + + Y E Sbjct: 66 NRPKLADIIFKNEEKRQKLNKITHPRVKD---------------YMLEERK--------- 101 Query: 121 QEISVQEVMPDCTIILDLP--------------------VDIGLKRVQNRYSLRESACLD 160 + ++ + D+P + LKR+ R +L + A LD Sbjct: 102 RYFAMGG----KVVFFDIPLLFESHLESLVDQIVVVWVTPETELKRLMERNNLTKEAALD 157 Query: 161 YFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + I EK A+ ++++ S + + + V Sbjct: 158 RINSQ-MGIDEK--------AKKAD---FVINNNESLEKTEKQVSAFIDRFVN 198 >gi|241802126|ref|XP_002400795.1| thymidine kinase, putative [Ixodes scapularis] gi|215510860|gb|EEC20313.1| thymidine kinase, putative [Ixodes scapularis] Length = 172 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 24/119 (20%) Query: 107 GERDSSQHLFLD-SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 G D +H LD Q I E + D + L ++ ++R+++R E ++ Sbjct: 54 GLMDPLEHSILDQWFQWIVQNERVALDLVVYLRTEPEVAMERIRHRKRPEE-------DQ 106 Query: 165 KDVMIHEKR----------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + + R F P R ++D+ V + V ++++ Sbjct: 107 ISLAWLRQVHMLHDSWLLGRSQF-----PLPPRVLVIDANRDCIDVQHELTRRVPDVLK 160 >gi|20092902|ref|NP_618977.1| signal recognition particle receptor [Methanosarcina acetivorans C2A] gi|19918211|gb|AAM07457.1| signal recognition particle receptor [Methanosarcina acetivorans C2A] Length = 417 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 67/204 (32%), Gaps = 37/204 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT IS + L + Y V + G T A A L + G + Sbjct: 224 IVFVGINGTGKTTSISKITNRLLKSGYSVVLAA--GDTFRAGAIDQ--LGIHANRLGVKM 279 Query: 67 EAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A + + ++ A KI +L D R + + +++I Sbjct: 280 IKHQAGADPAAVIYDAVQYA-KAHKIDFVLSD---------TAGRMHTNMNLMAQMEKI- 328 Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQN-------------RYSLRESAC----LDYFERK 165 + PD I +D + + ++R + + Y K Sbjct: 329 CRVSTPDLIIFVDEAVAGNDAVERAAQFNEAVPIDGSILTKIDADAKGGAAISIAYITGK 388 Query: 166 DVMIHEKRRQIFLDIARNQPDRCH 189 ++ Q + D+ + P+ Sbjct: 389 PILFFG-IGQGYEDLKKFDPEWFV 411 >gi|331654595|ref|ZP_08355595.1| hypothetical ATP-binding protein YghR [Escherichia coli M718] gi|331047977|gb|EGI20054.1| hypothetical ATP-binding protein YghR [Escherichia coli M718] Length = 252 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIETAISR 193 >gi|297154416|gb|ADI04128.1| hypothetical protein SBI_01007 [Streptomyces bingchenggensis BCW-1] Length = 217 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 67/214 (31%), Gaps = 19/214 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHV---LLSCG 58 F G + AGK++ +S ++ + T E P R V +L Sbjct: 11 FSVLLGPDYAGKSSVMSEFAS--SSPSWRLISTDERFLQPAHALIGRLRRDVAVDVLPSL 68 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ E A + A + + + ++ D + A + Sbjct: 69 GTDYSPEFTASLLQTAVVHLRDRIEASDPSSPTLV--DSYYYKILAKCRLAGLRDNPMYT 126 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQN-RYSLRESACLDYFERKDVMIHE-KRRQI 176 + P + LD+ +R N + R D + K ++ K R++ Sbjct: 127 WWRSF----PQPRRVVFLDVSTATAWRRSGNGAATNRLEYYGDRPDPKGFAAYQTKLRRL 182 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 LD + P ++ + A I ++ + Sbjct: 183 MLDEISHLP--VTVIRAQGDIAQTAQAIRKVLSD 214 >gi|288918003|ref|ZP_06412362.1| adenylate kinase [Frankia sp. EUN1f] gi|288350658|gb|EFC84876.1| adenylate kinase [Frankia sp. EUN1f] Length = 248 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 68/237 (28%), Gaps = 73/237 (30%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDEFGA 64 G++G+GK T L+ L + V T R ++ S + Sbjct: 5 VIMGVQGSGKGTQAKLMADELDLVHISVGDVFRWNVQHHTKIGAQVRRIVASGHLVGD-- 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 D VE+V+R L E + D F + A Q E L+ Sbjct: 63 ------------DLVESVVRTRLTEHDWNYGFIIDGFPRN--ARQAEF---------FLE 99 Query: 122 EISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFERKDV--------- 167 + I LDLP + + +R+ +R L + + +D Sbjct: 100 SYDIDG-----VIYLDLPDEEVVRRVLARRLCSRCGLDYNLIASRPQVEDTCDVCGGALV 154 Query: 168 ---------------MIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 H K R IF + +VD+ S V I Sbjct: 155 TRSDDNPEALAVRLSEYHAKTRPVMDIFQR-----KEHVAVVDARRSVLEVQAEIRE 206 >gi|229133608|ref|ZP_04262435.1| uridine kinase [Bacillus cereus BDRD-ST196] gi|228650008|gb|EEL06016.1| uridine kinase [Bacillus cereus BDRD-ST196] Length = 189 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 17/88 (19%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183 D TI +D P+DI + R R D+ E IH R+ +LD Sbjct: 104 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLDAIHT 154 Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D + S + I+ + Sbjct: 155 VKPNSDIVLDGSLSISEIIDQIIEELNR 182 >gi|301773304|ref|XP_002922072.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like, partial [Ailuropoda melanoleuca] Length = 4024 Score = 43.5 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 26/119 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G GAGK+T +L+ L R V ++ P A R +L G + Sbjct: 1974 VVIVGPSGAGKSTLWRMLRAALCRIGRVV---KQYTMNPKAMPRRQLL---GHIDMDTRE 2027 Query: 67 EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ +AR V+R ++CD +++SL + Sbjct: 2028 WSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2068 >gi|322708714|gb|EFZ00291.1| glucokinase [Metarhizium anisopliae ARSEF 23] Length = 225 Score = 43.5 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 61/202 (30%), Gaps = 35/202 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKTT L L + + + + D + E Sbjct: 55 GPAGCGKTTVAEHLANALDIPYIEGDLYHPQSNIDKMSSGIPL---TDADRWDWLTELRN 111 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 A +R+ EG ++ C A + + + + + + Sbjct: 112 QANSRI--------HDGAEGVVVAC-------SALKLKYRDVIRVAAYWDRSLIIHF--- 153 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L P ++ LKRV R A + I E+ R+ ++ D Sbjct: 154 ---IFLHAPAELLLKRVTARKGHYMGAN---MVKSQFDILERPRE-------DEID-VIT 199 Query: 191 VDSAHSFQSVATNILNIVWELV 212 VD++ V + L V ++ Sbjct: 200 VDASRDVDEVKEDALEKVKAML 221 >gi|9631211|ref|NP_047992.1| thymidine kinase [Ateline herpesvirus 3] gi|4019247|gb|AAC95545.1| thymidine kinase [Ateline herpesvirus 3] Length = 527 Score = 43.5 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 57/174 (32%), Gaps = 27/174 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58 FI EG G GKTT + ++ L +V EP + + + L Sbjct: 210 FFIFLEGSIGVGKTTLLKSMRGILP--GKNVLTFHEPMAFWKNVFSNSLDEVYKLTLPAK 267 Query: 59 VDEFGAEAEAIV----FAAARL------DHVENVIRPALMEGKILLCDRFLDS------S 102 V ++ + FAA L D + R L ++ DR S Sbjct: 268 VGSMTNSSKLLACQLKFAAPLLALKTSTDRLSISNRSNLSSNMWVMFDRHPLSATVVFPY 327 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 YQ S HL + D I+L+L L+RV+ R E Sbjct: 328 MHYQNGFLSFSHLVHLWGSFRASHG---DNIILLNLNSQENLERVKRRNRKEEK 378 >gi|302538641|ref|ZP_07290983.1| predicted protein [Streptomyces sp. C] gi|302447536|gb|EFL19352.1| predicted protein [Streptomyces sp. C] Length = 243 Score = 43.5 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 16/192 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL+++ G GK+T + L+R L G + A R + L Sbjct: 20 RGLYVAVSGNTSGGKSTLVEQLRRELVADGVPAI-----GVSERAFHHRFLPLMFSNSRD 74 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A + F R V+ L G+ ++ +R + + E S ++ D + Sbjct: 75 FAFPIQLSFMLER----HMVLLRNLALGRTVVMERSHLDDFLFVREHAESGNIAADQVAA 130 Query: 123 -------ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + PD ++++ P ++ LKR+ E E E+ Sbjct: 131 YRGLAHVLHARIPDPDVLVLMNPPAEVSLKRLAAAEEAGERPREFPDEAVKRGWVERWHA 190 Query: 176 IFLDIARNQPDR 187 ++ D+ + +R Sbjct: 191 MYEDLHAHFRER 202 >gi|239809500|gb|ACS26222.1| unknown [uncultured bacterium] Length = 210 Score = 43.5 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 32/148 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I F G+ G+GK+T L+ L + Y + L Sbjct: 28 QKGATIWFTGLSGSGKSTVACALEEALYERGYLAYR-----------------LDGDNVR 70 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G A R +++ V + + G I+L S Y + + Sbjct: 71 LGINKNLGFSAEDRAENIRRIGEVAKLFVDTGVIVLS--SFVSPY-------RADRERVR 121 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 L E + + + +D+P+ + +R Sbjct: 122 ELHEAAGMDF---IEVYVDVPLAVAEER 146 >gi|195447742|ref|XP_002071350.1| GK25181 [Drosophila willistoni] gi|194167435|gb|EDW82336.1| GK25181 [Drosophila willistoni] Length = 293 Score = 43.5 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 11/90 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G+ +GK+T L +L + VH+ E P A ++ + E + Sbjct: 4 VVITGLPASGKSTRARQLADYLTERGKKVHLVTENEAVPKAGYEKNAYFADSQKEKLGRS 63 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + A+R L + ++++ D Sbjct: 64 D-LKSEASR----------QLNKEEVVILD 82 >gi|301055145|ref|YP_003793356.1| hypothetical protein BACI_c36050 [Bacillus anthracis CI] gi|300377314|gb|ADK06218.1| conserved hypothetical protein [Bacillus cereus biovar anthracis str. CI] Length = 192 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 31/167 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 5 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F + +E I+ +G +++ DR F ++ + + ++ Sbjct: 54 ----FIVNQKMFIEAKIKEFQNAKGSVVIFDRGPEDVEFYTIFYPTTIGKEWDIETELKD 109 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L L+E D LD+ R N + S + F Sbjct: 110 ELYKLRE-----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 151 >gi|302795085|ref|XP_002979306.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii] gi|300153074|gb|EFJ19714.1| hypothetical protein SELMODRAFT_418926 [Selaginella moellendorffii] Length = 402 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%) Query: 49 AARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 R +L + A I+F+A R D + LM G L+ DRF S A+ Sbjct: 10 RLRCLLFLGRGADLDDRAVHILFSANRWDL---KMEKKLMAGTTLVVDRFSYSGVAFSAA 66 Query: 109 RDSSQHLFLDSLQ 121 + L L+ + Sbjct: 67 KG----LDLEWCK 75 >gi|309807858|ref|ZP_07701790.1| deoxyadenosine kinase [Lactobacillus iners LactinV 01V1-a] gi|308168960|gb|EFO71046.1| deoxyadenosine kinase [Lactobacillus iners LactinV 01V1-a] Length = 214 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ +L L + G P +L + Sbjct: 4 IVLSGPIGAGKSSLTKILADEL--HGHA--FYENVDGNP--------ILPLFYKDMSKYT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + ++H I A ++ D + DS + G DS++ L Sbjct: 52 --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 +++V PD I + +D LK ++ R + E D Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154 >gi|163785526|ref|ZP_02180106.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159879205|gb|EDP73129.1| adenylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 207 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 79/225 (35%), Gaps = 48/225 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G GAGK T L K + T + R + + E G +A+ Sbjct: 7 FLGPPGAGKGTQAQRLVE---EKGFVQIST--------GDILREAVKNG--TELGKKAKE 53 Query: 69 IVFAA----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A + + +EGK ++ D F R Q LD + ++ Sbjct: 54 YMDAGKLVPDDIIIGIIKDKLKELEGKDIILDGF---------PRTIPQAEALDKM--LA 102 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL------------DYFERKDV--MIH 170 D I+ D+P + +KR+ R ++ + + +R D + Sbjct: 103 EVGRQLDGVILFDVPDEEVIKRLSGRRVDPKTGKVYHIIYNPPPPDVEVIQRDDDKEEVI 162 Query: 171 EKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVW 209 +KR +++ + ++ ++D+ S V +L+++ Sbjct: 163 KKRLEVYHSQTAPLIEYYKKQNKLLVIDATKSPDEVYKELLSVLK 207 >gi|319789259|ref|YP_004150892.1| adenylate kinase [Thermovibrio ammonificans HB-1] gi|317113761|gb|ADU96251.1| adenylate kinase [Thermovibrio ammonificans HB-1] Length = 187 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 46/214 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + F G GAGK T + + T + R + A+ Sbjct: 4 VVFLGPPGAGKGTQAQRIAA---KYGVPHIST--------GDILRAAVKEGTELGKLAKT 52 Query: 67 EAIVFAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 R + V + +IR L E + F+ + + + L+ L Sbjct: 53 -----YMDRGELVPDDVIIGIIRERLSEPD-VKEKGFILDGFPRTIAQAKALDQMLEELN 106 Query: 122 EISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179 MP D I L++ + +KR+ R ++ + KR +++ + Sbjct: 107 -------MPLDRVIYLNVDDEEIVKRLLARGREDDTEEVIR----------KRLKVYREQ 149 Query: 180 ---IARNQPDRCHIVD--SAHSFQSVATNILNIV 208 + ++C +V+ + I + Sbjct: 150 TAPLIDYYSEKCLLVEIYGVGDIDEITAKIEEAL 183 >gi|255076513|ref|XP_002501931.1| adenylate kinase [Micromonas sp. RCC299] gi|226517195|gb|ACO63189.1| adenylate kinase [Micromonas sp. RCC299] Length = 248 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 74/232 (31%), Gaps = 56/232 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +GK T L+ + + A + R + + G A Sbjct: 46 IVIAGAPASGKGTQCELIVD---KYGLEHI--------SAGDLLRAAV--AAGTDLGVRA 92 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-------S 119 + + R D V + + G ++ A ++ S LD Sbjct: 93 KEFM---DRGDLVPDEVVV----GMVV---------EALDTDKAKSAGWLLDGYPRSASQ 136 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------- 159 I+ + ++PD I+LD+P DI ++RV R E+ + Sbjct: 137 ADAITKEGIIPDSVILLDVPDDILVERVVGRRMDPETGKIYHLKFNPPPADVAARCTQRS 196 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D E K + + + + + +D S V +I ++ E+ Sbjct: 197 DDTEEKAMNRLKVHHSNVEAVVGKYEGKINEIDGNRSKADVFADICGVIDEM 248 >gi|156937985|ref|YP_001435781.1| adenylate kinase [Ignicoccus hospitalis KIN4/I] gi|156566969|gb|ABU82374.1| adenylate kinase-like protein [Ignicoccus hospitalis KIN4/I] Length = 202 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 56/176 (31%), Gaps = 25/176 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT S L+ K Y V V R + ++ Sbjct: 12 GVPGVGKTTVTSKAVEMLKEKGYKVKVANFGDYMLKVAKERGWVQHRDEMRKLNLSQQRE 71 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ---GERDSSQHLFLDSLQEISVQE 127 A + + L + +L+ +D+ A G +++L Sbjct: 72 LQALAAKAIIEEAKAELGDEGVLI----VDTHAAINTPTGVWPGLPKHVIENLN------ 121 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 P +++ + ++R + S D V ++ F+++ARN Sbjct: 122 --PAIIFVIEASPEEIVERQRGDKGRVRSDYSD------VDFLKR----FMELARN 165 >gi|85057935|ref|YP_456851.1| guanylate kinase [Aster yellows witches'-broom phytoplasma AYWB] gi|119371172|sp|Q2NIH1|KGUA_AYWBP RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|84790040|gb|ABC65772.1| guanylate kinase [Aster yellows witches'-broom phytoplasma AYWB] Length = 211 Score = 43.1 bits (101), Expect = 0.025, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 66/218 (30%), Gaps = 50/218 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLS 56 GL I G G GK T L + N++ TR+P H L+ Sbjct: 5 KKGLLIILSGPSGVGKATVRKAL---FEMTNHNFVYSVSATTRKPRPGEQDGKDYH-FLT 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 E G E + A +DH + I+ L +GK + Sbjct: 61 KEEFEKGIENNCFLEWAKFIDHYYGTPKKQIQDFLKQGKEVFL---------------EI 105 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 + L++ + MP+ I +P R++ R + +E + + + Sbjct: 106 EVEGATHLRK----KRMPNTVFIFLVPPKKKDLYDRLKKRGTEQEINIVQRIAKANNEF- 160 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A +V+ VA I+ Sbjct: 161 --------RLAHKYD--YIVVN-----DEVANAADRII 183 >gi|240104007|ref|YP_002960316.1| signal recognition particle protein Srp54 [Thermococcus gammatolerans EJ3] gi|259511389|sp|C5A233|SRP54_THEGJ RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|239911561|gb|ACS34452.1| Signal recognition particle, subunit SRP54 (srp54) [Thermococcus gammatolerans EJ3] Length = 448 Score = 43.1 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 17/127 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT I+ L R LQ++ Y V + P A + ++ ++ FG E Sbjct: 107 GIQGSGKTTTIAKLARHLQKRGYKVGLVCTDTWRPGAYYQLKQLVEPYNIEVFGDPGE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + + +G +++ D R + ++ +++I + + Sbjct: 165 ---KDAIKLAREGVEYFKDKGVDVIIVD---------TAGRHKEESGLIEEMKQI-SEAI 211 Query: 129 MPDCTII 135 P I+ Sbjct: 212 KPHEVIL 218 >gi|220941822|emb|CAX15688.1| dynein cytoplasmic 2 heavy chain 1 [Mus musculus] Length = 4313 Score = 43.1 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++ +AR V+R ++CD +++SL Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066 Query: 121 QEI 123 + Sbjct: 2067 NSV 2069 >gi|72534792|ref|NP_084127.2| cytoplasmic dynein 2 heavy chain 1 [Mus musculus] gi|123781373|sp|Q45VK7|DYHC2_MOUSE RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName: Full=Cytoplasmic dynein 2 heavy chain; AltName: Full=Dynein cytoplasmic heavy chain 2; AltName: Full=Dynein heavy chain 11; Short=mDHC11; AltName: Full=Dynein heavy chain isotype 1B gi|71796861|gb|AAZ41367.1| dynein cytoplasmic heavy chain 2 [Mus musculus] gi|220941821|emb|CAX15687.1| dynein cytoplasmic 2 heavy chain 1 [Mus musculus] Length = 4306 Score = 43.1 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++ +AR V+R ++CD +++SL Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066 Query: 121 QEI 123 + Sbjct: 2067 NSV 2069 >gi|152979404|ref|YP_001345033.1| putrescine/spermidine ABC transporter ATPase protein [Actinobacillus succinogenes 130Z] gi|150841127|gb|ABR75098.1| spermidine/putrescine ABC transporter ATPase subunit [Actinobacillus succinogenes 130Z] Length = 373 Score = 43.1 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 23/49 (46%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49 +N+G FI+ G G GKTT + L+ F + + + E AE Sbjct: 33 INNGEFITILGPSGCGKTTVLRLIAGFEEANGGQIILDGEDVTNIPAEQ 81 >gi|325297662|ref|YP_004257579.1| KAP P-loop domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324317215|gb|ADY35106.1| KAP P-loop domain protein [Bacteroides salanitronis DSM 18170] Length = 864 Score = 43.1 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 26/65 (40%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I EG+ GAGK+ + L+++ LQ+ D + R LL D+ Sbjct: 48 RIIGIEGVWGAGKSNVVKLIEKHLQKDGSDYFFFEYDAWGNQEDLQRRSLLEQLTDKLVN 107 Query: 65 EAEAI 69 E I Sbjct: 108 EEILI 112 >gi|260890001|ref|ZP_05901264.1| dTMP kinase [Leptotrichia hofstadii F0254] gi|260860607|gb|EEX75107.1| dTMP kinase [Leptotrichia hofstadii F0254] Length = 111 Score = 43.1 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Query: 111 SSQHLFLDSLQEIS---VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 S + ++L+ L ++ + PD LD+P + ++NR + KD Sbjct: 4 SEREIYLNWLIDLEWRKIAIPEPDVVFFLDIPFVFSQQLMKNRENKITGEKEKDIHEKDK 63 Query: 168 MIHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSVATNILNIVWELV 212 + ++ +++ + +++ D + + + I+ I + + Sbjct: 64 NYLKNAYEVAKELSEKY--KWNVISCVKDDKLRTIEDINDEIMKITLKKI 111 >gi|145528007|ref|XP_001449803.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417392|emb|CAK82406.1| unnamed protein product [Paramecium tetraurelia] Length = 510 Score = 43.1 bits (101), Expect = 0.026, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 4/124 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGVDEFGAE 65 I G AGKTT ++ L L+ + + V++ E T + + + Sbjct: 89 ICITGGPCAGKTTGLNYLAEKLKERGFSVYIVPEAATTLFMGGGMLDLDNYSAEGKMTFQ 148 Query: 66 AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +L+H NV+ K ++LCDR L AY + + + + +L+E+ Sbjct: 149 MN-LLNLQMKLEHCFNVLAMLCPPNKTPVMLCDRGLMDGKAYMDQNEWYEMIGKYNLEEV 207 Query: 124 SVQE 127 +++ Sbjct: 208 KLRD 211 >gi|326330293|ref|ZP_08196603.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae bacterium Broad-1] gi|325951830|gb|EGD43860.1| adenylate kinase (ATP-AMP transphosphorylase) [Nocardioidaceae bacterium Broad-1] Length = 198 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 70/218 (32%), Gaps = 41/218 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-----ARHVLLSCGVDEFGAE 65 G GAGK T +++ T + AE A + G Sbjct: 7 GPPGAGKGTQAAVIAERFA---VPAISTGDIFRANVAEQTALGVAAQAYMDAGEYVPDEL 63 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A A R L G D FL Y R Q LD + ++ Sbjct: 64 TNA--MVADR-----------LASGDC--ADGFLLDGY----PRTPQQVAELDEILALAD 104 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181 + D ++L+ D + R+ R E D + + V+ +R +++ +A Sbjct: 105 VGL--DAVVLLEADPDELVGRLLARSQ--EQGRAD--DTESVI--RRRLEVYAAETGPLA 156 Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + +R VD V IL ++ + +R + Sbjct: 157 DHYAERDLLARVDGLGPVHEVTERILTVLTSVAAQRTA 194 >gi|312872699|ref|ZP_07732764.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2062A-h1] gi|325912308|ref|ZP_08174705.1| deoxyadenosine kinase [Lactobacillus iners UPII 143-D] gi|311091741|gb|EFQ50120.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2062A-h1] gi|325475967|gb|EGC79136.1| deoxyadenosine kinase [Lactobacillus iners UPII 143-D] Length = 214 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ +L L + G P +L + Sbjct: 4 IVLSGPIGAGKSSLTKILADELHGQ----AFYENVDGNP--------ILPLFYKDMSKYT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + ++H I A ++ D + DS + G DS++ L Sbjct: 52 --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 +++V PD I + +D LK ++ R + E D Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154 >gi|296393762|ref|YP_003658646.1| hypothetical protein Srot_1350 [Segniliparus rotundus DSM 44985] gi|296180909|gb|ADG97815.1| hypothetical protein Srot_1350 [Segniliparus rotundus DSM 44985] Length = 281 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 10/74 (13%) Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 Q +PD + LD P ++ +R R + + ER + R+ +L + Sbjct: 194 QTTLPDDVLWLDAPPELAARRCAARSESGQIEAHETPER--LAF---LRERYLAVRDLFE 248 Query: 186 D-----RCHIVDSA 194 R H+++++ Sbjct: 249 QRIPGTRFHVIETS 262 >gi|224009393|ref|XP_002293655.1| ATP sulfurylase [Thalassiosira pseudonana CCMP1335] gi|220971055|gb|EED89391.1| ATP sulfurylase [Thalassiosira pseudonana CCMP1335] Length = 968 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 32/156 (20%) Query: 11 GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G GAGKTT + L+ L + V+ L G + Sbjct: 157 GCSGAGKTTIATALEDRLIKAYGKHVYR-----------------LDGDNLRTGINRDLT 199 Query: 70 VFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A R + V G+I L D + + + + ++ ++ Sbjct: 200 FTEADRAESVRRT-------GEIATLFADSGVITLVGLISPYRADRDAVRKRHEDQNIPF 252 Query: 128 VMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYF 162 I LD+PV+ KR + +Y+ ES L +F Sbjct: 253 YE----IFLDVPVEELKKRDPKGQYARVESGQLKHF 284 >gi|170076971|ref|YP_001733609.1| bifunctional pantoate ligase/cytidylate kinase [Synechococcus sp. PCC 7002] gi|169884640|gb|ACA98353.1| pantothenate synthetase/cytidylate kinase [Synechococcus sp. PCC 7002] Length = 508 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 77/218 (35%), Gaps = 19/218 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAAEAARHVLLSCG 58 I+ +G GAGK+T + L+ D ++ E P E A L+S Sbjct: 286 IAIDGPAGAGKSTVTRQVAEQLKLLFLDTGAMYRAIAYLVLENNINPQDEVAVAELVSTA 345 Query: 59 VDEFGA---EAEAIVFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQGERDSSQH 114 E I A LD + + PA+ + ++ + + + Q +R Sbjct: 346 TITLVPPKAPTEPITVLANNLDVTQAIRTPAVTKQVSVIAAQAAVRQALVKQQQRLGENG 405 Query: 115 LFLDSLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + ++I V PD I L +R + + +D + + I E+ Sbjct: 406 GLVAEGRDIGTH-VFPDAELKIFLTATPAERARRRAKDLTAQGETNID-LGQLEAEITER 463 Query: 173 RR-QIFLDIA--RNQPDRCHIVDSAHSFQSVATNILNI 207 R IA PD ++ S ++V I+++ Sbjct: 464 DRLDSTRAIAPLTKAPDAVELITDDLSIEAVVAKIIHL 501 >gi|163795892|ref|ZP_02189856.1| hypothetical protein BAL199_20800 [alpha proteobacterium BAL199] gi|159178925|gb|EDP63461.1| hypothetical protein BAL199_20800 [alpha proteobacterium BAL199] Length = 527 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 57/205 (27%), Gaps = 36/205 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ GI G GKTT + L V + ++ R L E +A Sbjct: 355 VAIGGISGTGKTTLARAVAHLLGPPPGAVVL--------RSDVVRKRQLGVAETERLPKA 406 Query: 67 --EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E V + + + R G ++ D Y D Sbjct: 407 AYEPAVSSKVFAE-IHRRARRLAEFGSAVIAD------AVYGRCEDRRAIARAAGRAGTR 459 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + L+LP + RV R A +D ++ I Sbjct: 460 FLG------VWLELPKEEAQSRVAKRRGDASDATVDVVAKQATSI-------------VS 500 Query: 185 PDRCHIVDSAHSFQSVATNILNIVW 209 P ++D+ +A ++ V Sbjct: 501 PRNWLVLDATRPVAELAAEVVEAVR 525 >gi|15807280|ref|NP_296010.1| guanylate kinase [Deinococcus radiodurans R1] gi|6460098|gb|AAF11836.1|AE002061_3 guanylate kinase [Deinococcus radiodurans R1] Length = 272 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 77/230 (33%), Gaps = 52/230 (22%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSC 57 GL I G G GK T R+L DV TREP +V +S Sbjct: 51 RGLLIVVTGASGVGKGTLRE---RWL--AGQDVFYSTSWTTREPRPGEVNGR-DYVFVSP 104 Query: 58 GVDEFGAEAEAIVFAAARL-DHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113 A+ + A + +H I P AL G+ ++ + ++ A Q + + Sbjct: 105 AEFLAKAQQNGFLEHAQFVGNHYGTPIEPIEAALERGQDVVLE--IEVEGAMQVKDRMGE 162 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 I +P L ++ R + R + + E++ + Sbjct: 163 QAI---------------LVFI--MPP--SLTELRRRLTGRATETPERIEKR----LTRA 199 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 R +I R IV+ N+ V EL+ + + +++K Sbjct: 200 RD---EIQAAHDFRYVIVN---------DNLDRAVSELLAVQQAERAAQK 237 >gi|296224544|ref|XP_002758096.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like [Callithrix jacchus] Length = 409 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 37/185 (20%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F ++ EG++ GKTT + L+ V + P + R + Sbjct: 248 QKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF----- 295 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----- 114 D+ A ++ + + + ++ DR+ S+ Y + S Sbjct: 296 DDEPAIIRRAFYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLP 353 Query: 115 -------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + + L + + ++ + + L+R+Q R + + E V Sbjct: 354 PAHHPVYQWPEDLLKPDLVLLL-------TVSPEERLQRLQGRGMEKTREEAE-LEANSV 405 Query: 168 MIHEK 172 +K Sbjct: 406 -FRQK 409 >gi|134038647|gb|ABO48401.1| thymidine kinase [Wood mouse herpesvirus] Length = 647 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 71/239 (29%), Gaps = 60/239 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-------EAARHVLLSCGVDE 61 F+G G GKTT + FL +++ V EP + + V+ + + Sbjct: 334 FDGGIGVGKTTALEAAAEFL----HNILVIPEPIPYWTSTFDKNVCQQIYDVVRTKEKGK 389 Query: 62 FGA-------EAEAIVFAAARLDHVENVIRPALMEGK---ILLCDRFLDSSYA-----YQ 106 + A A F A + + + +G ++ DR + S + Sbjct: 390 KHSKKVLQCQMAFAQPFFATQHLLRRTCLGTKVSDGTCNNHVVIDRHMLSPTVLFPCLFF 449 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + L S Q D I+ L + + R++ R E Sbjct: 450 RLGVLKFGDLISLLSMFSAQCF--DNIILFKLNPRVAVTRIKERGRNPEGV--------- 498 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAH---------SFQSVATNILNI--VWELVQK 214 +L + +VD+ + + IL+ V + QK Sbjct: 499 ------INHGYLKLLNE------VVDAVFCAWELLAIVPPEVIVEAILSQTPVKRIFQK 545 >gi|256024430|ref|ZP_05438295.1| hypothetical protein E4_13729 [Escherichia sp. 4_1_40B] Length = 252 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|242080121|ref|XP_002444829.1| hypothetical protein SORBIDRAFT_07g028830 [Sorghum bicolor] gi|241941179|gb|EES14324.1| hypothetical protein SORBIDRAFT_07g028830 [Sorghum bicolor] Length = 212 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 64/216 (29%), Gaps = 63/216 (29%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + A + R + S + Sbjct: 32 GGPGSGKGTQCTNIVEHF---GF--------THLSAGDLLRAEIKSGSENG--------- 71 Query: 71 FAAARLDHVENVIRPALMEGKILLC----------------DRFLDSSYAYQGERDSSQH 114 +I + EGKI+ D+FL + R+ Sbjct: 72 ----------TMIDNMIKEGKIVPSEVTIKLLKEAMIKSENDKFLIDGF----PRNEENR 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 +++ +IS P + D + +R+ R R ++ ++ + E Sbjct: 118 AAFENVTKIS-----PAFVLFFDCAEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSL 172 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + + D+ +D+A V ++ I Sbjct: 173 PVIEYY-----SSKDKVKKIDAAKPIPEVFEDVKAI 203 >gi|300172676|ref|YP_003771841.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811] gi|299887054|emb|CBL91022.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811] Length = 214 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 80/232 (34%), Gaps = 35/232 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGKT+ +L L K P L ++G Sbjct: 2 IVLSGTIGAGKTSLTEMLANHLDSK----AFYESVDDNPILP-----LFYENPKKYGFLL 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----------SYAYQGERDSSQHL 115 + I+ A GK + DR + + A Q E D + L Sbjct: 53 QIYFLNKRLAQ-----IKVAQTTGKNNIVDRSIYEDALLFQLTADLNRATQTEVDIYKSL 107 Query: 116 FLDSLQEIS-VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHE 171 + + +I+ V ++ PD I + + + L+R++ R E A D +E + Sbjct: 108 VDNMMADITGVDDIKNPDLLIHVRVSFETMLERIEKRGRSFEQIAANPDLYEYYKEL--N 165 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATN-ILNIVWELVQKRVSPLSSK 222 KR + + P +D F V + V +++ ++S + +K Sbjct: 166 KRYDAWFESYDRSPK--VQIDGDR-FDFVMNDEARYKVLDMIDTKLSEVDTK 214 >gi|168016757|ref|XP_001760915.1| predicted protein [Physcomitrella patens subsp. patens] gi|162687924|gb|EDQ74304.1| predicted protein [Physcomitrella patens subsp. patens] Length = 185 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 69/212 (32%), Gaps = 43/212 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK T + + ++ D+ + G + ++ + Sbjct: 7 GGPGSGKGTQCAKIVEHFGFEHLSAGDLLRVEQNSGNETGNMIKGMIKEGKLVP------ 60 Query: 68 AIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + +I A+ + K L+ D F R+ D + Sbjct: 61 --------SEMTVKLILKAISKSSNNKFLI-DGF---------PRNDENREVWDRVA--- 99 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIA 181 + P+ + + + KRV +R R+ L+ ++ + +E + + IA Sbjct: 100 --GLSPEFILFIIGSEEEMQKRVLSRNEGRDDDNLETIHKRFKLFNEHTLPVVKHYESIA 157 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 H ++ S + V + I + +VQ Sbjct: 158 T-----VHKINGMQSIEDVFSEIRPLFDPIVQ 184 >gi|73663467|ref|YP_302248.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72495982|dbj|BAE19303.1| putative deoxyadenosine kinase [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 220 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 52/190 (27%), Gaps = 35/190 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L R T + L ++F + Sbjct: 12 ITIAGTVGVGKSTLTKALAE------------RFNFRTSFENVDHNPYLDKFYNDFERWS 59 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117 + F A R + G + DR + +A QG Sbjct: 60 FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHQEQGTMSPEDFETY 115 Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L + + PD I L+ D + R+Q R E D +K Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECDYDDVINRIQQRGRQMEIET-------DTAYWQKLY 168 Query: 175 QIFLDIARNQ 184 Q + D Sbjct: 169 QRYEDWISEF 178 >gi|302532235|ref|ZP_07284577.1| deoxynucleoside kinase [Streptomyces sp. C] gi|302441130|gb|EFL12946.1| deoxynucleoside kinase [Streptomyces sp. C] Length = 220 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 26/160 (16%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKT+ L+ + L +V P + + +E A+ + Sbjct: 11 GIGKTSVAELIAKEL---GSEVFYES-VEDNPILP----LFYTASPEEIQAKRYPFLLQL 62 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM---- 129 L I+ A +G +L DR + + + + SL+ + ++ Sbjct: 63 YFLQTRFAAIKAAYKQGDNVL-DRSIYEDWYFAKVNHDLGR--ISSLEMRVYEGLLDEMM 119 Query: 130 -----------PDCTIILDLPVDIGLKRVQNRYSLRESAC 158 PD + L + L R+ R E Sbjct: 120 REIDGLPYRKAPDLMVYLKADFETVLHRIGLRGRDFEQDE 159 >gi|325982449|ref|YP_004294851.1| sulfate adenylyltransferase, large subunit [Nitrosomonas sp. AL212] gi|325531968|gb|ADZ26689.1| sulfate adenylyltransferase, large subunit [Nitrosomonas sp. AL212] Length = 634 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 42/166 (25%) Query: 6 FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI F G+ G+GK+T +L+++ L + LL G Sbjct: 462 FILWFTGLSGSGKSTIANLVEKKLYSLGKHTY-----------------LLDGDNVRHGL 504 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A R++++ V + + G+I+L S + ++ + Sbjct: 505 NKDLGFTDADRVENIRRIAEVAKLMVDAGQIVLV-----SFISPFHSERRMARELVEQGE 559 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 + +D P+ + +R R L+ +D Sbjct: 560 FFE---------VFIDTPIHVAEERDPKGLYKKMRRGELKNFTGID 596 >gi|226480692|emb|CAX73443.1| NADH:ubiquinone reductase 42kD subunit precurs [Schistosoma japonicum] Length = 418 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 53/181 (29%), Gaps = 27/181 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK------------NYDV-----HVTREPGGTPAAEA 49 I EG +GK+ + L L N +V T P A+ Sbjct: 70 IVVEGNIASGKSNVAAKLAELLDMAYFPDPTEDDIYINRNVEPNFDLRTHNPLLPYDAKY 129 Query: 50 ARHVLLSCGVDEFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 + D + F R + + G+ ++ DR S +A+ Sbjct: 130 YTCEMFWNESDFINKGKGLYLQYHFYLRRYWNYLRALCHLFNTGQGVIIDRSPFSEFAFA 189 Query: 107 GERDS------SQHLFLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 L+ +++ + P I + P++ +R++ R E Sbjct: 190 DAMHKCNYLSQRGLLWFKQNHSMTITNIWKPHLLIYIKAPIEKIRERIKKRNIPWEVNAR 249 Query: 160 D 160 + Sbjct: 250 N 250 >gi|238927504|ref|ZP_04659264.1| guanylate kinase [Selenomonas flueggei ATCC 43531] gi|238884786|gb|EEQ48424.1| guanylate kinase [Selenomonas flueggei ATCC 43531] Length = 197 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 68/224 (30%), Gaps = 38/224 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I G G GK T L + + V T + R Sbjct: 1 MKKGLLIVVSGASGTGKGTVCKELLARERGVAFSVSAT--------SRTPREGEQDGREY 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F E A A +E + + + + A R S+ L + Sbjct: 53 YFRTRTEFETMIA----------EGAFLEYADVYGN-YYGTPLAPIEARRSAGEDILLEI 101 Query: 121 Q---EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++V E PD T I LP + +R+ R + + + I RR Sbjct: 102 DTQGALNVMERCPDGTFIFLLPPSLEELRRRITGRGTESKESLARRLAAARDEIRLGRRY 161 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV-WELVQKRVSP 218 + + + ++ A I I+ E ++ ++P Sbjct: 162 RYAVL-------------NDTVENAAAQIQTILAAERLRADMNP 192 >gi|157414143|ref|YP_001485009.1| adenylate kinase [Prochlorococcus marinus str. MIT 9215] gi|254526294|ref|ZP_05138346.1| adenylate kinase (ATP-AMP transphosphorylase) [Prochlorococcus marinus str. MIT 9202] gi|166980347|sp|A8G742|KAD_PROM2 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|157388718|gb|ABV51423.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9215] gi|221537718|gb|EEE40171.1| adenylate kinase (ATP-AMP transphosphorylase) [Prochlorococcus marinus str. MIT 9202] Length = 182 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 73/218 (33%), Gaps = 51/218 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-----VLL 55 M L F G GAGK T LL + T E R +L Sbjct: 1 MKRHLL--FLGAPGAGKGTQAELLSQ-----------TNSYLHLSTGELLRKEIDMNTIL 47 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPAL--MEGKILLCDRFLDSSYAYQGERDSSQ 113 V + E + + V ++R L +L G + Sbjct: 48 GIQVKDIMNRGELV-----SDELVLKIVRQNLVKDNKGWIL-----------DGYPRNLS 91 Query: 114 HLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +SL E+ + P + LD+P ++ +KR+ R ++ V I++K Sbjct: 92 QA--NSLNEVLTEINQPLEVVFYLDIPEEVLIKRLLLRGRKDDTEKTIR---TRVDIYKK 146 Query: 173 R----RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 Q F D++ + +D+ ++++++I Sbjct: 147 TTEPLIQYFKDLSLLEY-----IDADRDLKTISSDIKQ 179 >gi|150403620|ref|YP_001330914.1| signal recognition particle-docking protein FtsY [Methanococcus maripaludis C7] gi|150034650|gb|ABR66763.1| signal recognition particle-docking protein FtsY [Methanococcus maripaludis C7] Length = 383 Score = 43.1 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 15/126 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI G GKTT IS L L+ + Y V + G T A A + + Sbjct: 183 GINGTGKTTSISKLGYILKERGYSVVMAA--GDTFRAGAIEQLEEHGKNTAI--KVIKHQ 238 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 A + + I A +G ++L D R ++ +D +++ V+ Sbjct: 239 KGADSAAVIYDAISHAKAKGIDVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 288 Query: 130 PDCTII 135 PD I Sbjct: 289 PDLIIF 294 >gi|326914442|ref|XP_003203534.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Meleagris gallopavo] Length = 4190 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +LK L + V T P P RH LL + Sbjct: 1925 VVIVGPSGAGKSTLWQMLKAALGKTGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 1979 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 1980 SDGVLTNSAR-----QVVREPQDTTSWIICD-------------GDIDPEWIESLNSV 2019 >gi|308467276|ref|XP_003095887.1| hypothetical protein CRE_08501 [Caenorhabditis remanei] gi|308244355|gb|EFO88307.1| hypothetical protein CRE_08501 [Caenorhabditis remanei] Length = 413 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 1/123 (0%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G AGKTT + +L++F + +V++ E T + ++ + Sbjct: 38 IAVTGGPSAGKTTAMEILEKFFKDHGCEVYLVPE-AATELQKMGFSFPKLSADRKYNFQK 96 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E I + VI I++ DR + AY + S L L E ++ Sbjct: 97 ELINMILYLEGALLRVIGKPEGRDIIIIMDRGVMDPSAYSSPEEWSAILKDLGLNEFELK 156 Query: 127 EVM 129 Sbjct: 157 HTR 159 >gi|78187627|ref|YP_375670.1| guanylate kinase [Chlorobium luteolum DSM 273] gi|119371257|sp|Q3B204|KGUA_PELLD RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|78167529|gb|ABB24627.1| guanylate kinase [Chlorobium luteolum DSM 273] Length = 197 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 65/218 (29%), Gaps = 44/218 (20%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + F G GK+T + + V T P + + LS E Sbjct: 9 GRLVVFSAPSGTGKSTIARRVLERFPSMRFSVSATTRPMREGEVDGVNYHFLSKEDFESE 68 Query: 64 AE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E F + R A+ +G LL D LD Sbjct: 69 IRNGGFIEHEFFFGNHYGTLLQKTREAMAQGTDLLLD--------------------LDV 108 Query: 120 LQEISVQEVMPD---CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++++++ PD + P D+ +R+Q+R S E + ER + + Sbjct: 109 KGAMNLKKLFPDSSLLVFL--APPSMDVLKERLQSRKSEDEESLKLRLERARLEL----- 161 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 DR V + + ++ + + Sbjct: 162 --------GFADRFDTVIINDTLEDAVEAVILAISNFL 191 >gi|71894395|ref|YP_278503.1| putative deoxyguanosine kinase [Mycoplasma synoviae 53] gi|71851183|gb|AAZ43792.1| putative deoxyguanosine kinase [Mycoplasma synoviae 53] Length = 224 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 44/236 (18%) Query: 5 LFISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I GI G +GK+T L + ++ E ++ + + Sbjct: 1 MLI---GISGMISSGKSTLSKNLNKHYKK------------SMLLNEFQEEDVVFNTMLD 45 Query: 62 FGAEAEAIVFAAARLDHVENVIR-----------PALMEG-KILLCDRFLDSSYAYQGER 109 + + + A + VE I L + I+ DRF Y + Sbjct: 46 WFYKNRPHLNIAFQAYVVEKHINEVQSIIREFNSKNLDKNSDIIFLDRFGAEHYVFAKVI 105 Query: 110 DSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 + +E+ ++ P+ I LD+ +R+ R E Sbjct: 106 LEKLPKKILKAYEAIFKELVSKDDFPELAIFLDVSFKNFKERLFKRGREIEINTW----S 161 Query: 165 KDVMIHEKRR----QIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQKR 215 ++ +K + F+DI + I+D+ + + V + I+ + +++ Sbjct: 162 QNEEYFKKLHGVYKKTFIDIVNRYEIKYEIIDTNNLTPKQVELKAIEIINKYKEEK 217 >gi|294786592|ref|ZP_06751846.1| deoxynucleoside kinase [Parascardovia denticolens F0305] gi|294485425|gb|EFG33059.1| deoxynucleoside kinase [Parascardovia denticolens F0305] Length = 242 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 24/162 (14%) Query: 15 AGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI-VF 71 AGK+T +L L + P ++ + A + V+ Sbjct: 10 AGKSTLTQILSDEL---GTKAFFEPVEDNPVLPLFYHGNKLVEEGKAET-NPYAFLLQVY 65 Query: 72 AAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQH-----LFLDSL 120 R + I+ A+ E +L DR + DS + QG + L + L Sbjct: 66 FLNRRFAM---IKKAMQEDNNIL-DRSIYEDSIFMKMNTDQGHATEEEWNIYKSLLDNML 121 Query: 121 QEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 +E+ + ++ PD I +D+ ++ L RV+ R E D Sbjct: 122 EELPYAAKKKSPDLMIFVDVNLETMLYRVKKRGRPFEQVDED 163 >gi|149020737|gb|EDL78542.1| rCG31851, isoform CRA_a [Rattus norvegicus] Length = 2750 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++ +AR V+R ++CD +++SL Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066 Query: 121 QEI 123 + Sbjct: 2067 NSV 2069 >gi|119512089|ref|ZP_01631182.1| hypothetical protein N9414_07374 [Nodularia spumigena CCY9414] gi|119463247|gb|EAW44191.1| hypothetical protein N9414_07374 [Nodularia spumigena CCY9414] Length = 509 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 25/160 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60 +G I G+ G+GK+T L R LQ R+ GG E L + Sbjct: 340 KAGKLILMSGVSGSGKSTTAKYLARELQAIQIRSDAVRKHLGGISLGERGGDDLYTP--- 396 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + A + +I +G ++ D + QHL D++ Sbjct: 397 EMTQKTYARLLNL-------GIILA--QQGFHVILD-----------AKYDKQHLRQDAI 436 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + ++ P I P+++ +R+ NR A +D Sbjct: 437 AQAEKHQL-PLQIIYCTAPLEVVQERLANRTGDIADATVD 475 >gi|12711694|ref|NP_075413.1| cytoplasmic dynein 2 heavy chain 1 [Rattus norvegicus] gi|81917503|sp|Q9JJ79|DYHC2_RAT RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName: Full=Cytoplasmic dynein 2 heavy chain; AltName: Full=Dynein cytoplasmic heavy chain 2; AltName: Full=Dynein heavy chain isotype 1B; AltName: Full=Dynein-like protein 4 gi|8777465|dbj|BAA97048.1| cytoplasmic dynein heavy chain [Rattus norvegicus] Length = 4306 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 26/123 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G GAGK+T +L+ L + V T P P RH LL Sbjct: 1972 RTGVVIV--GPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDM 2024 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + ++ ++ +AR V+R ++CD +++SL Sbjct: 2025 DTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESL 2066 Query: 121 QEI 123 + Sbjct: 2067 NSV 2069 >gi|226228307|ref|YP_002762413.1| hypothetical protein GAU_2901 [Gemmatimonas aurantiaca T-27] gi|226091498|dbj|BAH39943.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 204 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 14/120 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++F G G GKTT L L+R + V + +E A R L F A+A Sbjct: 20 VAFVGTHGVGKTTLCFDLAAQLKRLDLGVDIVKEV-------ARRCPLPINEDTTFDAQA 72 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + I A ++++CDR + +YAY R + ++E Sbjct: 73 WIL------HTQIAEEIEAA-SHYEVVVCDRSVLDNYAYLVARVGRRPELEPLVREWVSG 125 >gi|225849525|ref|YP_002729690.1| adenylate kinase (ATP-AMP transphosphorylase) (AK)(superoxide-inducible protein 16) (SOI16) [Sulfurihydrogenibium azorense Az-Fu1] gi|225644031|gb|ACN99081.1| adenylate kinase (ATP-AMP transphosphorylase) (AK)(Superoxide-inducible protein 16) (SOI16) [Sulfurihydrogenibium azorense Az-Fu1] Length = 216 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 47/228 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G GAGK T LLK R N+ T + R + S A+ Sbjct: 10 IIFLGPPGAGKGTQSQLLKE---RDNFVQIST--------GDLLREAVKSQTSLGIKAKQ 58 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF-LDSLQEISV 125 D + ++I L E F D + + G + L +L + Sbjct: 59 FMDEGKLVPDDLIIDLISEKLEE--------FKDKNIIFDGFPRTVPQAEALKTL--LDK 108 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY----FERKDV 167 ++ D I+ ++ + +KR+ R + D ++D Sbjct: 109 KDRKIDAVILFEIDDEEVVKRLSGRRICPNCGAVYHIIFNPPKNDNLCDKCGTPLIQRDD 168 Query: 168 MIHEKRRQI---FLD----IARNQPDRCHIVDSAHSFQSVATNILNIV 208 E R+ + + D +D+ + V I +++ Sbjct: 169 DKEEVIRKRLSVYHSQTAPLIDYYKDILLKIDATKPPEEVYKTIKSVL 216 >gi|145220358|ref|YP_001131067.1| guanylate kinase [Prosthecochloris vibrioformis DSM 265] gi|145206522|gb|ABP37565.1| guanylate kinase [Chlorobium phaeovibrioides DSM 265] Length = 194 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 42/217 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G + F G GK+T + R L + V TR H L + D Sbjct: 7 QQGKLVVFSAPSGTGKSTIARRVMRKLPELQFSVSATTRSMRPGEVDGVNYHFLSAEAFD 66 Query: 61 EF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G E F + A+ +G+ LL D L Sbjct: 67 GLVRSGGFIEHEFFFGNHYGTLLEKTSEAVRDGRHLLLD--------------------L 106 Query: 118 DSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 D ++++++ P + + P ++ +R+Q R S E+ ER + Sbjct: 107 DVKGALNLKKLFPANSLLVFIR-PPSMEVLKERLQGRGSEDEAGLKLRLERASLE----- 160 Query: 174 RQIFLDIARNQPDRCH--IVDSAHSFQSVATNILNIV 208 L+ A ++D + +V +I + + Sbjct: 161 ----LEYADRFDVVFVNDLLD--ETVDAVTDSIRSFL 191 >gi|296084582|emb|CBI25603.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 51/232 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T ++ + + D+ + G+ A+ + + Sbjct: 81 ISGAPASGKGTQCEMIVQKFGLVHISTGDLLRSEVSSGSEIGNKAKEYM---DTGRLVPD 137 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 I+ AR+ + + L++G R +Q L+ L+ Sbjct: 138 EVVIMMVTARISQEDAKEKGWLLDGF----------------PRTFAQAQSLEKLK---- 177 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDYF--ERKDV---------MIHE 171 + PD I+LD+P I + R R + L +F E +++ E Sbjct: 178 --IRPDVYIVLDVPDQILIDRCVGRRVDPVTGKIYHLKFFPSENEEIKARLVTRSDDTEE 235 Query: 172 KRRQIFLDIARNQPDRCH--------IVDSAHSFQSVATNILNIVWELVQKR 215 K + L+I + + VD HS V I +++ ++ Q + Sbjct: 236 KVKSR-LEIYKKNAEAILSTYSTIMNKVDGNHSKDEVFKPIDSLLSKMQQDK 286 >gi|257054491|ref|YP_003132323.1| Adenylate kinase [Saccharomonospora viridis DSM 43017] gi|256584363|gb|ACU95496.1| Adenylate kinase [Saccharomonospora viridis DSM 43017] Length = 184 Score = 43.1 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 69/212 (32%), Gaps = 45/212 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60 + G GAGK T + L + L T + GTP A+ L S + Sbjct: 4 VVLVGPPGAGKGTQAATLSQRL---GVPHISTGDLFRKHVGEGTPLGREAKRYLDSGELV 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + E + P G L D F R++ Q L + Sbjct: 61 PDTVTNEMV---------RERLAEPDAQSGF--LLDGF---------PRNTKQADVLGEI 100 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD- 179 E + + D I L +P D +KR+ R ++ + +R+Q++ Sbjct: 101 LEENGHSL--DAVIELKVPEDELVKRLLGRGRADDTEEVIR----------RRQQVYRSE 148 Query: 180 ---IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + D VD V+ +L+ + Sbjct: 149 TAPLLEYYSDILVTVDGIGDVDEVSARVLDAL 180 >gi|219681773|ref|YP_002468159.1| adenylylsulfate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682328|ref|YP_002468712.1| adenylylsulfate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471475|ref|ZP_05635474.1| adenylylsulfate kinase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219622061|gb|ACL30217.1| adenylylsulfate kinase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624616|gb|ACL30771.1| adenylylsulfate kinase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311086152|gb|ADP66234.1| adenylylsulfate kinase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086727|gb|ADP66808.1| adenylylsulfate kinase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311087312|gb|ADP67392.1| adenylylsulfate kinase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087822|gb|ADP67901.1| adenylylsulfate kinase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 206 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 36/145 (24%) Query: 7 IS--FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I F G+ G+GK+T + L+ L + + LL G Sbjct: 30 IVLWFTGLSGSGKSTIANFLEEILFKNGIN-----------------SYLLDGDNIRSGL 72 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ A R +++ V++ L G I+L + S Y Q E + L+ Sbjct: 73 CSDLSFSLADRNENIRRIGEVVKMMLHAGLIILV--SVISPYRNQREMVRQMLGKKNFLE 130 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 + +D P++I R Sbjct: 131 ------------VFIDTPIEICESR 143 >gi|71661369|ref|XP_817707.1| dynein heavy chain [Trypanosoma cruzi strain CL Brener] gi|70882914|gb|EAN95856.1| dynein heavy chain, putative [Trypanosoma cruzi] Length = 3227 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQR V P P R LL ++ Sbjct: 1944 VVLVGPGGSGKSTLLRVLRRALQRLGVSVPLYVMNPKAMP-----RTQLLGHMDNDTREW 1998 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AA + V++ ++CD +++SL + Sbjct: 1999 FDGVLTEAA-----KKVVKEENDVHSWIVCD-------------GDIDPEWIESLNSV 2038 >gi|309365946|emb|CAP22251.2| hypothetical protein CBG_01006 [Caenorhabditis briggsae AF16] Length = 169 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 22/196 (11%), Positives = 56/196 (28%), Gaps = 46/196 (23%) Query: 29 QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM 88 + + + E +P E L G + A ++F+A R ++ ++ Sbjct: 9 EERG--ALIVFEDRQSPVGEMIDRYL--RGEIDMDEHALHLLFSADR------FLKKKMI 58 Query: 89 EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQ 148 + I++ + + + + PD + + ++ R Sbjct: 59 KQHIVV------------KIYGKKNEILIIIIVFRPIGLPKPDIVLFFQVSPEVAASR-- 104 Query: 149 NRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR-----NQPDRCHIVDSAHSFQSVATN 203 + E + ++A+ V++ + +V Sbjct: 105 ------GGFGNERLETAQLQ---------AEVAKVMPTLRDDAFWKSVNADAALAAVEKE 149 Query: 204 ILNIVWELVQKRVSPL 219 + + EL R PL Sbjct: 150 VFQLYTEL--DRSKPL 163 >gi|217033563|ref|ZP_03438992.1| hypothetical protein HP9810_905g82 [Helicobacter pylori 98-10] gi|216944088|gb|EEC23519.1| hypothetical protein HP9810_905g82 [Helicobacter pylori 98-10] Length = 191 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D +V+ H + R +FL Sbjct: 105 AQNEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189 >gi|195454119|ref|XP_002074095.1| GK12802 [Drosophila willistoni] gi|194170180|gb|EDW85081.1| GK12802 [Drosophila willistoni] Length = 196 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 59/216 (27%), Gaps = 57/216 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T S + Q A + R G + Sbjct: 13 GGPGAGKGTQCSKIVDRFQF-----------THLSAGDLLREERSREGSE---------- 51 Query: 71 FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLD-------SL 120 ++I + GKI+ + S + +D +L Sbjct: 52 --------FGSLIEDYIRNGKIVPVEV----TCSLLENAMKNSGKTRFLIDGFPRNQDNL 99 Query: 121 QEISVQ-EVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + Q D + D D+ ++R R D E +KR Q + Sbjct: 100 DGWNRQMGDKADMQFVLFFDCSEDVCVQRCLGRGQSGSGRSDDNMES-----LKKRIQTY 154 Query: 178 ----LDIAR--NQPDRCHIVDSAHSFQSVATNILNI 207 L I + + +D++ V + + + Sbjct: 155 NNDSLPIIKHFENDGKVKTIDASPDADKVFSEVERV 190 >gi|134045929|ref|YP_001097415.1| signal recognition particle-docking protein FtsY [Methanococcus maripaludis C5] gi|132663554|gb|ABO35200.1| signal recognition particle-docking protein FtsY [Methanococcus maripaludis C5] Length = 383 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 15/126 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI G GKTT IS L L+ + Y + G T A A + + + Sbjct: 183 GINGTGKTTSISKLAYILKERGYSAVMAA--GDTFRAGAIEQLEEHGKNTDI--KVIKHQ 238 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 A + + I A +G ++L D R ++ +D +++ V+ Sbjct: 239 KGADSAAVIYDAINHAKAKGLNVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 288 Query: 130 PDCTII 135 PD I Sbjct: 289 PDLIIF 294 >gi|257126631|ref|YP_003164745.1| guanylate kinase [Leptotrichia buccalis C-1013-b] gi|257050570|gb|ACV39754.1| guanylate kinase [Leptotrichia buccalis C-1013-b] Length = 181 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 3/95 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G G+GK+T L+K L TR+P L ++ Sbjct: 2 KGKLIIVSGPSGSGKSTVTKLVKDRLNIPLSISATTRQPRTGEINGKDYFFLTKEIFEQK 61 Query: 63 GAEAEAIVFAAARLDH---VENVIRPALMEGKILL 94 E +A ++ ++ V+ L +G ++ Sbjct: 62 IKNDEFYEYANVHGNYYGTLKEVVENNLSKGLNVI 96 >gi|297265388|ref|XP_002799179.1| PREDICTED: UMP-CMP kinase 2, mitochondrial-like isoform 2 [Macaca mulatta] Length = 408 Score = 43.1 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 37/185 (20%) Query: 2 NSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G F ++ EG++ GKTT + L+ V + P + R + Sbjct: 247 QKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DDE 297 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH----- 114 A ++ + + + ++ DR+ S+ Y + S Sbjct: 298 PTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHLP 352 Query: 115 -------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 + + L + + ++ + + L+R+Q R + + E V Sbjct: 353 PAHHPVYQWPEDLLKPDLILLL-------TVSPEERLQRLQGRGMEKTREEAE-LEANSV 404 Query: 168 MIHEK 172 +K Sbjct: 405 -FRQK 408 >gi|229258560|gb|ACQ45585.1| cell division protein FtsY [Vesicomya sp. endosymbiont] Length = 194 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT I L + Q + V + G T A A +++ ++ A+ + Sbjct: 45 GVNGSGKTTLIGKLAKSFQDQGKSVMLAA--GDTFRAAAIEQLIIWGRLNNIPVVAQTL- 101 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + + A + IL+ D Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILIAD 127 >gi|294495862|ref|YP_003542355.1| signal recognition particle-docking protein FtsY [Methanohalophilus mahii DSM 5219] gi|292666861|gb|ADE36710.1| signal recognition particle-docking protein FtsY [Methanohalophilus mahii DSM 5219] Length = 351 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT I+ + L+ N V + G T A A + + + G + Sbjct: 159 IVFVGINGTGKTTSIAKIAHRLKAMNKSVVIAA--GDTFRAGAIDQI--AVHAERIGVKL 214 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 V + ++ A ++L D R + + LQ+I Sbjct: 215 IKHQEGGDPAAVVYDAVQYAKAHDSDVVLSD---------TAGRMHTNVNLMAQLQKICR 265 Query: 126 QEVMPDCTIILD 137 PD + +D Sbjct: 266 VSP-PDLVLFVD 276 >gi|218691275|ref|YP_002399487.1| hypothetical protein ECED1_3634 [Escherichia coli ED1a] gi|218428839|emb|CAR09640.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli ED1a] gi|222034707|emb|CAP77449.1| Uncharacterized ATP-binding protein yghR [Escherichia coli LF82] gi|312947545|gb|ADR28372.1| hypothetical protein NRG857_14810 [Escherichia coli O83:H1 str. NRG 857C] Length = 252 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|167751848|ref|ZP_02423975.1| hypothetical protein ALIPUT_00090 [Alistipes putredinis DSM 17216] gi|167660089|gb|EDS04219.1| hypothetical protein ALIPUT_00090 [Alistipes putredinis DSM 17216] Length = 208 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 30/219 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-AAEAARHVLLSCGVDEFG 63 ++I+ G G+GKTT +L Y E P + + + Sbjct: 1 MYIAIAGNIGSGKTTLTEMLTER-----YGAKAYYEQSDNPYIGDFYNDMNRWSFNLQM- 54 Query: 64 AEAEAIVFAAARLDHVENVIR---PALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLDS 119 F +R+ +++R + + + + D ++ + + G S Sbjct: 55 ------YFLGSRIQQTMDILRSGPVDIFQDRTVYEDAYIFADNLHRMGLMSGRDFDTYMS 108 Query: 120 LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + + PD I L V + +++ R E D + + Sbjct: 109 IFGLITNLVPRPDLLIYLKASVPTLISQIRRRGRAYEMNI-------DEQYLRRLNDRYD 161 Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 D N ++D + + V E + R+ Sbjct: 162 DWIENIYRGEVLVID--KDREDFVAD--AAVMEKICARL 196 >gi|255534078|ref|YP_003094450.1| guanylate kinase [Pedobacter heparinus DSM 2366] gi|255347062|gb|ACU06388.1| guanylate kinase [Pedobacter heparinus DSM 2366] Length = 189 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 23/101 (22%), Positives = 37/101 (36%), Gaps = 5/101 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G I F GAGKTT + L ++ + TRE G E + + Sbjct: 1 MKQGKLIIFSAPSGAGKTTIVKHLLTKFPSLSFSISATTRELRGDEKNEKDYYFITKEDF 60 Query: 60 DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96 A E + V++ + + I+ E K ++ D Sbjct: 61 LHKVARQEFVEFEEVYSGTFYGTLRSEIQRIWDEDKHVIFD 101 >gi|242775628|ref|XP_002478679.1| uridylate kinase Ura6 [Talaromyces stipitatus ATCC 10500] gi|218722298|gb|EED21716.1| uridylate kinase Ura6 [Talaromyces stipitatus ATCC 10500] Length = 209 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 62/213 (29%), Gaps = 43/213 (20%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G GAGK T L R L + RE G+ E RH + + Sbjct: 19 GGPGAGKGTQSENLVRDYGFSHLSAGDLLRAEQVRE--GSEYGELIRHHIREGTIVPMEV 76 Query: 65 EAEAI-VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AA L+ + PA RFL + Q +D Sbjct: 77 TVALLSNAMAAILEQNSSKATPA----------RFLIDGFPRQ----------IDQAHFF 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEK-----RRQI 176 + + L P ++ L R+ R D E RK E+ R+ Sbjct: 117 EETVCVSKLVLFLSCPEEVMLSRLLKRGETSGRDD-DNIESIRKRFRTFEQTSMPVVREF 175 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + V++ S + V I + Sbjct: 176 ------EEKGKVISVEATGSKEEVYERIKAELK 202 >gi|118094486|ref|XP_422391.2| PREDICTED: similar to adenylate kinase 5 [Gallus gallus] Length = 573 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 59/237 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCG 58 FI G G+GK++ L ++ + T + ++ + ++ Sbjct: 379 FFIV--GGPGSGKSSQCEQLA---KKYGFTHLSTANLLQNELSSLSERSKFIKDIMECGE 433 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G E + + + L + K L D + L Sbjct: 434 PVPGGIVLELL----------KEAMITNLGDTKGFLIDGYPC---------------ELK 468 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-----RKDVMIHEKR 173 +E + P LD + + +RY +R +F+ ++ + Sbjct: 469 EAEEFESKIGEPKLVFCLDCSAET----MNSRYLMRNQTSQ-HFDSAETIKEGI------ 517 Query: 174 RQIFLDIAR---NQPDR---CHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 + + A+ +R VD+ + + V ++ + L++K + S++ Sbjct: 518 -EGYCQAAKPLTAYYERKTQLCKVDAEGTAEDVFLDVCKSIDSLLKKEEAAFSTETQ 573 >gi|157122962|ref|XP_001653786.1| adenylate kinase isoenzyme [Aedes aegypti] gi|157122964|ref|XP_001653787.1| adenylate kinase isoenzyme [Aedes aegypti] gi|108874575|gb|EAT38800.1| adenylate kinase isoenzyme [Aedes aegypti] gi|108874576|gb|EAT38801.1| adenylate kinase isoenzyme [Aedes aegypti] Length = 202 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 63/208 (30%), Gaps = 28/208 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDEFGAEAE 67 G G GK T + ++ + RE G+ + + ++ EA Sbjct: 15 GGPGCGKGTQCEKIVAKYNFSHFSTGDLLREEVASGSDKGKELQEMMKQG--ILVPNEAV 72 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 + AA + + + +L Y + + F+ + Sbjct: 73 LKLLEAAMAKALSSTVG-------------YLIDGYPREPAQGPEFEKFIAPV------- 112 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 D + + + + R+ R S + D E R+ I P + Sbjct: 113 ---DIILYFECSNETLVARILKRASESATVRADDNEETLKTRIATFRENTEKILVQYPTQ 169 Query: 188 CHIVDSAHSFQSVATNILNIVWELVQKR 215 +++ + + + ++ + EL+ + Sbjct: 170 LKRINAERAPEEIFADVEKFIDELLAAK 197 >gi|297482614|ref|XP_002707773.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Bos taurus] gi|296480384|gb|DAA22499.1| cytoplasmic dynein 2 heavy chain 1-like [Bos taurus] Length = 4316 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P RH LL + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|227327239|ref|ZP_03831263.1| shikimate kinase II [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 173 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 44/211 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G G GKTT L + L YD T V+ G Sbjct: 1 MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AL + + +R + ++ G + Sbjct: 56 GFRQRESL-----------------ALQQ---VTSNRCIVAT----GGGMVLAEANRRFM 91 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178 + I L ++ +R++ + L +++ R+ + Sbjct: 92 HDKGT-------VIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +A H++D++ + +++ ++L + Sbjct: 145 GVAH------HVIDASQTPEAIVASVLKALR 169 >gi|194673141|ref|XP_589775.4| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Bos taurus] Length = 4314 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P RH LL + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|146310520|ref|YP_001175594.1| shikimate kinase II [Enterobacter sp. 638] gi|166988288|sp|A4W763|AROL_ENT38 RecName: Full=Shikimate kinase 2; Short=SK 2 gi|145317396|gb|ABP59543.1| shikimate kinase [Enterobacter sp. 638] Length = 174 Score = 43.1 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 48/213 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G G GKTT L R Q + D T T A ++ G + Sbjct: 1 MTQPIFLV--GPRGCGKTTVGLELARACQSQFVD---TDHWLQTKAGRTIAEIVEKEGWE 55 Query: 61 EFGA-EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F A E E + A+ ++ Sbjct: 56 TFRALETETL---------------KAVSAPSTVI------------ATGGGI------I 82 Query: 120 LQEISVQEVMPD-CTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQI 176 L E + + I L PV ++R++ R + + + +R + Sbjct: 83 LAEHNRGFMREHGIVIYLCAPVATLVERLEAFPEEGQRPTLTGKPISDEVSEVLAERDAL 142 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + A H+VD++ + + V ++I+ + Sbjct: 143 YREAAH------HVVDASQTPEQVVSHIVTALR 169 >gi|224054041|ref|XP_002191299.1| PREDICTED: putative NADH dehydrogenase ubiquinone 1 alpha subcomplex 10 variant 2 [Taeniopygia guttata] Length = 357 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 18/163 (11%) Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISV 125 R+ + + L G+ ++ +R S + + QG ++EIS+ Sbjct: 138 FGNRILQYADALEHLLSTGQGVVLERSPYSDFVFLDAMLKQGYVHKRCLDHYKEVKEISI 197 Query: 126 QEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL-DIAR 182 E++P I +D+PV KR+Q + E Y + + + FL +I+ Sbjct: 198 SELLPPHLVIYVDVPVPEVQKRIQEKGKPYEKKVSPSYLQSIEDAYKK----TFLPEISE 253 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 + + +A + V +I E ++ P + D+ Sbjct: 254 SSEVLQYTATAAEDVEKVIEDI-----EYLKFDKGPWVEQDDV 291 >gi|145510889|ref|XP_001441372.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408622|emb|CAK73975.1| unnamed protein product [Paramecium tetraurelia] Length = 223 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 85/230 (36%), Gaps = 37/230 (16%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--AAEAARHVLLSCGVDEFG 63 IS EG G+GK+T + L +Q+K D+ EP LL +E Sbjct: 8 LISIEGNIGSGKSTLLRL----MQQKYPDLRFIAEPVNEWQSINGDPSLNLLGSFYEEPS 63 Query: 64 AEAEAIVFAAA--RLDHVENVIRPAL--MEGKILLCDRFLDS---SYAYQGERDS----- 111 A + A RL H + V+ L + ++L +R +++ +A G ++ Sbjct: 64 RWAYTMQVYAFYSRLKHWKEVLSDPLNPEDRHLILSERSIEADKEIFAVNGHKNGMINNL 123 Query: 112 ---SQHLFLDSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 F D L + ++ I L + D +E+ + ++ + Sbjct: 124 EFALYEKFYDWLCDEVFGKKIQKQMIIYLQVDPD------------QENEEKNTISKEYL 171 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQS--VAT-NILNIVWELVQK 214 R + +L +Q +++ F+S V + N + + +Q+ Sbjct: 172 TQIHNRHEEWLLRETHQNTSILVLNGDKEFESDLVQQSKLFNSIDQFLQE 221 >gi|90421123|ref|ZP_01229025.1| cell division protein FtsY [Aurantimonas manganoxydans SI85-9A1] gi|90334615|gb|EAS48395.1| cell division protein FtsY [Aurantimonas manganoxydans SI85-9A1] Length = 362 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 16/154 (10%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L L R V + G T A A + + + A+AI Sbjct: 163 GVNGTGKTTTIGKLAAKLTRGGLKVTLCA--GDTFRAAAVEQLKIWGERTQSEVVAKAI- 219 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128 A A+ G +L +D+ R ++ + L++I +Q+ Sbjct: 220 -GADAASLAYEGYDRAVENGSDVLI---IDT-----AGRLQNKTELMAELEKIVRVLQKR 270 Query: 129 MPDC--TIILDLPVDIGLKRVQNRYSLRESACLD 160 PD T++L L G + R A ++ Sbjct: 271 EPDAPHTVLLTLDATTGQNAMNQVEIFRNVAGVN 304 >gi|73954875|ref|XP_851166.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2 isoform 2 [Canis familiaris] Length = 4309 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L R V T P P RH LL + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|169631260|ref|YP_001704909.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium abscessus ATCC 19977] gi|169243227|emb|CAM64255.1| CysN/CysC bifunctional enzyme [Mycobacterium abscessus] Length = 632 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 26/140 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ +GK+T L+R L + + L G A Sbjct: 464 IWITGLSASGKSTVAVELERRLVARGIPAYR-----------------LDGDNLRHGLNA 506 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + AA R ++V V A+ + +L D + + A + + ++ + Sbjct: 507 DLGFSAADRAENVRRV--GAVAQ---ILSDSGVVAVAALISPYRADRDKIRAQHEKAGLP 561 Query: 127 EVMPDCTIILDLPVDIGLKR 146 V + +D PV+I +R Sbjct: 562 FVE----VFVDTPVEICEQR 577 >gi|229367842|gb|ACQ58901.1| Thymidine kinase 2, mitochondrial precursor [Anoplopoma fimbria] Length = 278 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 64/207 (30%), Gaps = 30/207 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------VLLSCGVD 60 I EG +GKTT + ++ N +V EP + R + Sbjct: 70 ICIEGNIASGKTTCLEYFQKT---SNIEVLT--EPVSKW--KNIRGHNPLALMYQDPERW 122 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFL-D 118 + + R H+ + P M + + +++ + G+ + L + Sbjct: 123 GITLQTYVQLTMLDR--HLSAMTAPVRMMERSIFSAKYIFVENLFRSGKMPEVDYAVLSE 180 Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 I+ +P D + L KR++ R E + E Q++ Sbjct: 181 WFDWITTNISIPVDLIVYLQTSPQTCHKRLKQRSREEEKVIP-------LEYLESIHQLY 233 Query: 178 LD-IARNQ----PDRCHIVDSAHSFQS 199 D + + P ++ + Q Sbjct: 234 EDWLVKQNSSPLPAPVLVIPADGDLQK 260 >gi|212696158|ref|ZP_03304286.1| hypothetical protein ANHYDRO_00694 [Anaerococcus hydrogenalis DSM 7454] gi|325846654|ref|ZP_08169569.1| guanylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212676787|gb|EEB36394.1| hypothetical protein ANHYDRO_00694 [Anaerococcus hydrogenalis DSM 7454] gi|325481412|gb|EGC84453.1| guanylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 198 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G + G G GK T + L + Y V TR+ + Sbjct: 1 MKKGFLLVISGPSGVGKGTVLHDLMNTQKNLVYSVSVTTRKQRPGEIEGVSYFFKSHEEF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94 ++ E + + FA ++ + + + EGKI++ Sbjct: 61 EKMIEEDKFLEFAKVHDNYYGTPKEFVEEKINEGKIVI 98 >gi|74313617|ref|YP_312036.1| hypothetical protein SSON_3220 [Shigella sonnei Ss046] gi|73857094|gb|AAZ89801.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 252 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 80/237 (33%), Gaps = 54/237 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAI------VFAA--------ARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ ++AA R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCLSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR------ 193 Query: 153 LRESACLDYFERKD-VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 DY E +D + + K + + +DS + V V Sbjct: 194 ---KPDHDYAELQDKIGVMSKI--GY------NGTKILEIDSRAPYSEVLEQAQKAV 239 >gi|320164451|gb|EFW41350.1| guanylate kinase [Capsaspora owczarzaki ATCC 30864] Length = 213 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 37/215 (17%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62 I G GAGK+T + L F + + H TR+P P E R + D Sbjct: 27 IVLAGPSGAGKSTLLKKLMAEFPNAFGFSISHTTRKP--RPGEEHGREYWFTTREDLIRG 84 Query: 63 ---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G E+ F+ + + + GKI + D QG + Sbjct: 85 VAAGEFIESAEFSGNMYGTSKRAVEDVVRRGKICVLD------IDMQGVKSVKNTD---- 134 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L V P T ++ KR+++R + E + + + Sbjct: 135 LNARFVFVQPP--TF------ELLEKRLRDRNTETEESLRKRLDTAKGEF------EYAA 180 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + I++ + ++ IV E + K Sbjct: 181 LPGSYD--FTIIN--DNLDQAYADLRAIVLEDISK 211 >gi|225027329|ref|ZP_03716521.1| hypothetical protein EUBHAL_01585 [Eubacterium hallii DSM 3353] gi|224955331|gb|EEG36540.1| hypothetical protein EUBHAL_01585 [Eubacterium hallii DSM 3353] Length = 224 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 5/122 (4%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G AGKTT +S ++ + Y V E + + S + + Sbjct: 25 IVITGGPCAGKTTGMSWIQNAFTERGYRVLFISETATELISGGVAPWICSDNTEYQKCQM 84 Query: 67 EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + V + KI ++CDR + AY E D S L L E+ + Sbjct: 85 KLQL----EKEKVFEQAARTMNSDKILIVCDRGTLDNKAYMTEADFSLVLNELGLNEVEL 140 Query: 126 QE 127 ++ Sbjct: 141 RD 142 >gi|197128637|gb|ACH45135.1| putative NADH dehydrogenase ubiquinone 1 alpha subcomplex 10 variant 2 [Taeniopygia guttata] Length = 359 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 18/163 (11%) Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLFLDSLQEISV 125 R+ + + L G+ ++ +R S + + QG ++EIS+ Sbjct: 140 FGNRILQYADALEHLLSTGQGVVLERSPYSDFVFLDAMLKQGYVHKRCLDHYKEVKEISI 199 Query: 126 QEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL-DIAR 182 E++P I +D+PV KR+Q + E Y + + + FL +I+ Sbjct: 200 SELLPPHLVIYVDVPVPEVQKRIQEKGKPYEKKVSPSYLQSIEDAYKK----TFLPEISE 255 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 + + +A + V +I E ++ P + D+ Sbjct: 256 SSEVLQYTATAAEDVEKVIEDI-----EYLKFDKGPWVEQDDV 293 >gi|167045473|gb|ABZ10127.1| putative phosphoribulokinase / Uridine kinase family protein [uncultured marine microorganism HF4000_APKG10F17] Length = 199 Score = 43.1 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 68/195 (34%), Gaps = 42/195 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLL-SCGVDEF 62 I GI+ +GKTT L+ ++ + + +E + + S ++ Sbjct: 24 IGINGIDCSGKTTFAKLVSKYFTHYKIENVCRDIDNFNNPAIESETYKAFVSGSWDEEDL 83 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SL 120 E I+ + V+ + + +++ + +F+ L Sbjct: 84 NKYYELIINFSD----ATRVVSESKKKYSVVI-----------------LEGIFIYKPQL 122 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +I D I LD+ + +G KR + R R+ D ++ ++ H + + Sbjct: 123 VDIF------DLKIYLDIDISLGRKRFAKRRSIERDKRPFDIYDEIWMLSHLR----YE- 171 Query: 180 IARNQPDRC--HIVD 192 + P R ++D Sbjct: 172 -SEVHPKRISDLVID 185 >gi|332157931|ref|YP_004423210.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2] gi|331033394|gb|AEC51206.1| signal recognition particle protein Srp54 [Pyrococcus sp. NA2] Length = 443 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 17/127 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAI 69 G++G+GKTT ++ L R+ Q++ Y V V P A LL ++ FG E Sbjct: 107 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPQE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + ++ +G +++ D R + ++ +++I + + Sbjct: 165 ---KDAIKLAREGVKHFKEKGVDLIIVD---------TAGRHKEEKNLIEEMRQI-SEAI 211 Query: 129 MPDCTII 135 P I+ Sbjct: 212 NPHEVIL 218 >gi|221130176|ref|XP_002164511.1| PREDICTED: similar to adenylate kinase 5 [Hydra magnipapillata] Length = 400 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 39/215 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDE 61 I G G GK T SL+ + + D+ T ++++ + Sbjct: 9 KIIFILGGPGCGKGTQCSLISKKFDMAHISAGDLLRLEAENDTEIGLMIKNMMKEG---Q 65 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLFLDS 119 + I D ++ IR IL+ D F S QG + + Sbjct: 66 LVPQEIVI-------DLLKEAIRKNQHSNGILI-DGFPREYS----QGLKFEIEVCPSS- 112 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIF 177 + D +I ++R+ +R S R ++ +++ + H K Sbjct: 113 ------------LILYYDCHDEILVERLVSRGQQSGRIDDNIETIKKRLQLFHTKT---- 156 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + D+ ++DS+ S + V IV L+ Sbjct: 157 TPLLVDYKDKVQVIDSSKSIEEVFIESSRIVSCLL 191 >gi|14520695|ref|NP_126170.1| signal recognition particle protein Srp54 [Pyrococcus abyssi GE5] gi|12230641|sp|Q9V1E8|SRP54_PYRAB RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|5457911|emb|CAB49401.1| srp54 signal recognition particle, subunit SRP54 [Pyrococcus abyssi GE5] Length = 443 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 17/127 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAEAI 69 G++G+GKTT ++ L R Q++ Y V V P A LL ++ FG E Sbjct: 107 GVQGSGKTTTVAKLARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + + + +G +++ D R + ++ ++ I E+ Sbjct: 165 ---KDAIKLAKEGVEHFKAKGVDLIIVD---------TAGRHKEEKDLIEEMRMI-SNEI 211 Query: 129 MPDCTII 135 P I+ Sbjct: 212 KPHEVIL 218 >gi|110638262|ref|YP_678471.1| hypothetical protein CHU_1863 [Cytophaga hutchinsonii ATCC 33406] gi|110280943|gb|ABG59129.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 320 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 31/78 (39%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +S L I G+EG+ K+T+ + + L + YDV + G + S + Sbjct: 57 SSKLMIVSHGLEGSSKSTYARWMAKRLIAEGYDVLIWNFRGCSDTPNRLLRFYHSGDSQD 116 Query: 62 FGAEAEAIVFAAARLDHV 79 E VF A D + Sbjct: 117 LRTMLELAVFPADYQDLI 134 >gi|47570216|ref|ZP_00240869.1| uridine kinase, putative [Bacillus cereus G9241] gi|47553122|gb|EAL11520.1| uridine kinase, putative [Bacillus cereus G9241] Length = 186 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 74/213 (34%), Gaps = 38/213 (17%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN IS + G GKTT L L + + Sbjct: 1 MNKNTKVISIAAVSGGGKTTVTERLTHKLINS-------------------KALYFDSYH 41 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+ + ++ E V+ P + + + L+ D S+ Y Sbjct: 42 FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----VIIDYPFAY 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L Q + D TI +D P+DI + R R E+ + + K M R+ +L+ Sbjct: 92 LNSEMRQFI--DVTIFIDTPLDIAMARRILRDFKEETMSEIHNDLKHYMTFA--RKAYLE 147 Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWEL 211 N +P+ I+D + S + I + V EL Sbjct: 148 AIHNVKPNSDIILDGSLSVAEI---IDHAVEEL 177 >gi|315297639|gb|EFU56916.1| conserved hypothetical protein [Escherichia coli MS 16-3] Length = 256 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 27 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 87 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 146 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 197 >gi|119590258|gb|EAW69852.1| guanylate kinase 1, isoform CRA_b [Homo sapiens] gi|119590260|gb|EAW69854.1| guanylate kinase 1, isoform CRA_b [Homo sapiens] Length = 263 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 75/226 (33%), Gaps = 47/226 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 67 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 113 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G D + E + R + I A G + + S A Q + ++ Sbjct: 114 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 164 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 165 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 221 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +P +V S + + E ++K Sbjct: 222 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 257 >gi|313674513|ref|YP_004052509.1| signal recognition particle subunit ffh/srp54 (srp54) [Marivirga tractuosa DSM 4126] gi|312941211|gb|ADR20401.1| signal recognition particle subunit FFH/SRP54 (srp54) [Marivirga tractuosa DSM 4126] Length = 443 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G++G+GKTT L L+++ V + PAA VL ++ G E Sbjct: 102 ILISGLQGSGKTTFSGKLANRLKKQGKQVLLAACDIYRPAAIDQLKVL----GEQIGVEV 157 Query: 67 EAIVFAAARLDHVENVIRPALMEGK-ILLCD 96 A + +N I+ A GK I++ D Sbjct: 158 YAEPENKDAVKIAKNAIKFAKDNGKSIVIVD 188 >gi|313124889|ref|YP_004035153.1| signal recognition particle-docking protein ftsy [Halogeometricum borinquense DSM 11551] gi|312291254|gb|ADQ65714.1| signal recognition particle-docking protein FtsY [Halogeometricum borinquense DSM 11551] Length = 446 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 35/201 (17%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67 F G+ G GKTT I+ + R+ +++ V + A E R + + Sbjct: 253 FTGVNGVGKTTSIAKMARYFEKQGLSVVLANGDTYRAGANEQIRK-----HAENLDTKII 307 Query: 68 AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + + + A ++L D R + + + L++I + Sbjct: 308 SHEQGGDPAAVIYDAVEYAEAHDIDVVLGD---------TAGRLHTSNDLMAQLEKID-R 357 Query: 127 EVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC-----LDYFERKDVMI---------- 169 V PD T+ +D + ++R + E D I Sbjct: 358 VVEPDLTLFVDEAVAGQDAVERAKQFNEAAEIDGAVLTKADADSNGGAAISIAYVTGKPI 417 Query: 170 -HEKRRQIFLDIARNQPDRCH 189 Q + DI + P+R Sbjct: 418 LFLGVGQGYDDIEQFDPERMV 438 >gi|156743927|ref|YP_001434056.1| nucleoside-triphosphate--adenylate kinase [Roseiflexus castenholzii DSM 13941] gi|156235255|gb|ABU60038.1| Nucleoside-triphosphate--adenylate kinase [Roseiflexus castenholzii DSM 13941] Length = 226 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 39/162 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T ++L+ VHV + R L A++ Sbjct: 3 IILLGAPGAGKGTQ----AKYLEEHTGMVHVAS-------GDLFRAALRQGTELGMLAKS 51 Query: 67 EAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 R + V E + +P + G ++ D F R Q Sbjct: 52 -----YMDRGELVPDEVVIRMIIERISKPDCIRG--VIFDGF---------PRTREQARA 95 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 L++ E++ Q D + + +P D+ L+R+ R + + Sbjct: 96 LEA--ELNKQGRRIDVVLYIRVPEDMLLRRIAGRQTCKTCGA 135 >gi|73954869|ref|XP_536596.2| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2 isoform 1 [Canis familiaris] Length = 4306 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L R V T P P RH LL + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|52141882|ref|YP_084943.1| hypothetical protein BCZK3358 [Bacillus cereus E33L] gi|51975351|gb|AAU16901.1| conserved hypothetical protein [Bacillus cereus E33L] Length = 157 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 50/144 (34%), Gaps = 31/144 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 30 ISLQGPMASGKTT----LAKRLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 78 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHL 115 F A + +E I+ +G +++ DR F ++ + + ++ Sbjct: 79 ----FIANQKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKD 134 Query: 116 FLDSLQEISVQEVMPDCTIILDLP 139 L L+E D LD+ Sbjct: 135 ELYKLRE-----CRSDAIFYLDVS 153 >gi|15920615|ref|NP_376284.1| cytidylate kinase [Sulfolobus tokodaii str. 7] gi|22001671|sp|Q975K7|KCY_SULTO RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|15621398|dbj|BAB65393.1| 180aa long hypothetical adenylate kinase [Sulfolobus tokodaii str. 7] Length = 180 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 77/216 (35%), Gaps = 41/216 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63 + I G G+GK+T +L + L K H+ RE + E Sbjct: 1 MIIVISGPPGSGKSTVAKILSKNLSLKYISAGHIFRELAEKEGLSLLELNKKAEENFEID 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + +F A + +N+I + + G L L++I Sbjct: 61 KKIDREIFRIASTE--KNIIIESHI-GGWL--------------------------LKDI 91 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLDIAR 182 + D T+ L+ ++I R+ R ++ + ++ ER++ H +R + I Sbjct: 92 A------DITVYLNASIEIRAMRIAKRDNIPFTKAIEQIIEREES--HSRRFLAYYGIDL 143 Query: 183 NQPDRC-HIVDS-AHSFQSVATNILNIVWELVQKRV 216 + ++++ ++ I + ++ K + Sbjct: 144 SDLSVFDLVINTDNLQPDEISKIIEAYLNFMLAKNI 179 >gi|195970178|ref|NP_385483.2| adenylate kinase [Sinorhizobium meliloti 1021] gi|307314380|ref|ZP_07593986.1| adenylate kinase [Sinorhizobium meliloti BL225C] gi|307322092|ref|ZP_07601468.1| adenylate kinase [Sinorhizobium meliloti AK83] gi|20138494|sp|Q93FE6|KAD_RHIME RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|16588799|gb|AAL26898.1| adenylate kinase [Sinorhizobium meliloti] gi|187904170|emb|CAC45956.2| Probable adenylate kinase [Sinorhizobium meliloti 1021] gi|306892274|gb|EFN23084.1| adenylate kinase [Sinorhizobium meliloti AK83] gi|306899078|gb|EFN29720.1| adenylate kinase [Sinorhizobium meliloti BL225C] Length = 192 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 37/209 (17%), Positives = 68/209 (32%), Gaps = 31/209 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G GAGK T LL R T + R + E G A+A Sbjct: 5 FLGPPGAGKGTQAKLLTE---RYGIPQLST--------GDMLRTAV--AQATEVGKRAKA 51 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISV 125 ++ V + I ++ DR + A D ++ + + Sbjct: 52 VM---DAGQLVSDEIVNE------IVSDRIDSADCARGFILDGYPRTVPQAVALDRMLEE 102 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181 + + D I L + ++R++NR + +A + +R Q + + ++ Sbjct: 103 KGLKLDAVIELKVDEAALVRRMENRVTETVAAGGTVRSDDNPEAFRRRLQEYREKTAPLS 162 Query: 182 RNQP--DRCHIVDSAHSFQSVATNILNIV 208 + R VD +V I I+ Sbjct: 163 EHYARTGRLKTVDGMADVHTVTAEIEKIL 191 >gi|73954873|ref|XP_863210.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2 isoform 4 [Canis familiaris] Length = 4312 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L R V T P P RH LL + Sbjct: 1981 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2035 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2036 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2075 >gi|71666527|ref|XP_820221.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70885558|gb|EAN98370.1| hypothetical protein Tc00.1047053509965.20 [Trypanosoma cruzi] Length = 677 Score = 43.1 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 49/228 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GK+T ++ L+ + ++ Y V E +L++ G+ Sbjct: 132 ICLTGGPCGGKSTLLTQLQAKMPQRTGYKVFCVPEAAT---------LLVTGGMVWNSDL 182 Query: 66 AEAIVFAAARLD--HVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E A R+ + A+ G I++ DR A+ S+ +F L+ Sbjct: 183 IEEQQLALIRVQIGLEDQFYNVAMASGAPSIVISDRGTMDGRAF-----CSEEIFERILR 237 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD---YFER--KDVMI 169 ++ + ++ R V +E LD +E + V Sbjct: 238 RLN-------------VTLETLRDRYDAVIHLVTAASGAKEYYNLDNPSRYENVEEAVES 284 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +K RQ+++ P I+D++ +F+ L++V +++ +R S Sbjct: 285 DKKLRQVYV----GHPM-LRIIDNSTTFEEKMERGLSLVGQVIGQRFS 327 >gi|319790373|ref|YP_004152006.1| guanylate kinase [Thermovibrio ammonificans HB-1] gi|317114875|gb|ADU97365.1| guanylate kinase [Thermovibrio ammonificans HB-1] Length = 227 Score = 42.7 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 36/172 (20%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G GKTT +L + + + V + TR P H + + Sbjct: 7 KGLLIVVSAPSGTGKTTLCHMLLKEIPTLEFSVSYTTRPPREGEVDGRDYHFVTKEQFER 66 Query: 62 FGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 E + + ++ ++ + AL EG+ +L D +D+ A Q +++ Sbjct: 67 MIEEGDFLEWANVYGNLYGTSKSQ-----VLKALEEGRDILLD--IDTQGALQVKKN--- 116 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 P+ +I LP L+ ++ R R + + ER+ Sbjct: 117 ---------------FPEAVLIFILPP--SLEELERRLRKRGTDPEEVIERR 151 >gi|222102163|ref|YP_002546753.1| uridine kinase [Agrobacterium radiobacter K84] gi|221728280|gb|ACM31289.1| uridine kinase [Agrobacterium radiobacter K84] Length = 117 Score = 42.7 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVH 36 G I +G++G+GKTT L L +K V Sbjct: 20 GRLIVAIDGVDGSGKTTFADELAPVLTQKGRPVV 53 >gi|209735388|gb|ACI68563.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial precursor [Salmo salar] gi|209735808|gb|ACI68773.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial precursor [Salmo salar] gi|303657723|gb|ADM15891.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial precursor [Salmo salar] Length = 351 Score = 42.7 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 33/223 (14%), Positives = 69/223 (30%), Gaps = 28/223 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTRE----PGGTPAAEAARHV 53 IS +G +GK L L +Y +T E P + Sbjct: 58 KIISIDGNLASGKGALAQNLAEKLGMLYMPEPDTHYLDKMTAEKAPLPTAFNGNCSLEKF 117 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QG 107 + + RL + + L G+ ++ +R S + QG Sbjct: 118 YRDPKAADGNSYRLQAWMYLVRLLQWSDAMEHLLTTGQGVVLERSPYSDMVFVEAMFKQG 177 Query: 108 ERDSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + ++ IS+ + + P I +D+P + K+++ L E Sbjct: 178 YIRKQCVDHYNEIKGISICEFLPPHLVIYVDMPAEEVQKKLKASGKDVPLPYLKSIE--- 234 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSA--HSFQSVATNILNI 207 ++K +L + D+ + +A +I ++ Sbjct: 235 -DAYKKT---YLPKISENAE-LLAYDATQAQDIERIAEDIEDL 272 >gi|73954871|ref|XP_863187.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2 isoform 3 [Canis familiaris] Length = 4318 Score = 42.7 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L R V T P P RH LL + Sbjct: 1981 VVIVGPSGAGKSTLWRMLRAALCRTGRVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2035 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2036 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2075 >gi|149182838|ref|ZP_01861299.1| dephosphocoenzyme A kinase [Bacillus sp. SG-1] gi|148849453|gb|EDL63642.1| dephosphocoenzyme A kinase [Bacillus sp. SG-1] Length = 200 Score = 42.7 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 73/228 (32%), Gaps = 64/228 (28%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTR----------EPGGTPAAEAARHVLLSC 57 G+ G +GK+T LL + K + V EP E V+L+ Sbjct: 6 GLTGGIASGKSTVSKLLIQ----KGFTVVDADAAARKAVAPGEPALEKIIEVFGEVILNP 61 Query: 58 GV--------------DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 +E E IV A R + + + ++ D Sbjct: 62 DGTLNRSALGDIIFTSEERRKELNGIVHPAVRAQMLAEKDQAFESGKQTVIMD------- 114 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 LF +L + D TI++ + + LKR+ R SL + Sbjct: 115 --------IPLLFESNLTWMV------DRTIVVYVDRETQLKRLMKRNSLTVEEATARIQ 160 Query: 164 RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + + EK ++A+ ++D+ + ++ + ++ Sbjct: 161 SQ-MPLQEK-----KNLAQA------VLDNTGTIENTLEQLDELIVRW 196 >gi|15669239|ref|NP_248044.1| putative kinase [Methanocaldococcus jannaschii DSM 2661] gi|3123086|sp|Q58450|KAD6_METJA RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|1499895|gb|AAB99053.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 177 Score = 42.7 bits (100), Expect = 0.033, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 64/211 (30%), Gaps = 56/211 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GKTT +L+ L V EA + L DE Sbjct: 3 IAITGTPGVGKTTISKVLRDRL---GIKVI--------DITEAVKKYKLYTEKDEDMDSY 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + +E I + K ++ D + Sbjct: 52 VIDF------EKLEKFIDEIEEKEKTIILDGHV-------------------------SH 80 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-P 185 + PD I+L +I +R++ R + + E + LD+ + Sbjct: 81 LLNPDYIIVLRCNPEIIKERLEKRGYKPKK------------VLENIQAEILDVCLCESK 128 Query: 186 DRCHIVDSA-HSFQSVATNILNIVWELVQKR 215 + + +D+ +++ I+ + +++ Sbjct: 129 GKVYEIDTTNRDVENIVDEIIEAIKHKKERK 159 >gi|291238023|ref|XP_002738925.1| PREDICTED: bifunctional 3-phosphoadenosine 5-phosphosulfate synthase-like [Saccoglossus kowalevskii] Length = 627 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 72/223 (32%), Gaps = 47/223 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I F G+ GAGKTT L+ +L K P + RH L F Sbjct: 54 RGCTIWFTGLSGAGKTTVSFALEDYLCSKGI-------PTYALDGDNLRHGL--NKNLGF 104 Query: 63 GAEAEAIVFAAARLDHVENV--IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + R +++ V + +G I+ A+ + Sbjct: 105 SPD--------DREENIRRVGEVAKLFADGGIV-------CLTAFISPFRKDRQSARKIH 149 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 QE + I +D P+++ +R V+ Y + + F + Q + + Sbjct: 150 QESGLPFFE----IFVDTPLEVCEQRDVKGLYKKARAGMIKGF--TGID------QAYEE 197 Query: 180 IARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLSS 221 A + + +L ++ E + + PLS+ Sbjct: 198 PANAD----LTIKGGECTIDEAVNQVLQLLQE---RNILPLSA 233 >gi|309809769|ref|ZP_07703623.1| deoxyadenosine kinase [Lactobacillus iners SPIN 2503V10-D] gi|308169948|gb|EFO71987.1| deoxyadenosine kinase [Lactobacillus iners SPIN 2503V10-D] Length = 214 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ +L L + G P +L + Sbjct: 4 IVLSGPIGAGKSSLTKILADELHGQ----AFYENVDGNP--------ILPLFYKDMSKYT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + ++H I A ++ D + DS + G DS++ L Sbjct: 52 --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 +++V PD I + +D LK ++ R + E D Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154 >gi|259500736|ref|ZP_05743638.1| deoxyadenosine kinase [Lactobacillus iners DSM 13335] gi|302190811|ref|ZP_07267065.1| deoxynucleoside kinase [Lactobacillus iners AB-1] gi|309804099|ref|ZP_07698180.1| deoxyadenosine kinase [Lactobacillus iners LactinV 11V1-d] gi|309804861|ref|ZP_07698923.1| deoxyadenosine kinase [Lactobacillus iners LactinV 09V1-c] gi|312871308|ref|ZP_07731406.1| deoxyadenosine kinase [Lactobacillus iners LEAF 3008A-a] gi|312873547|ref|ZP_07733596.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2052A-d] gi|312874882|ref|ZP_07734901.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2053A-b] gi|315654170|ref|ZP_07907086.1| deoxyadenosine kinase [Lactobacillus iners ATCC 55195] gi|325913653|ref|ZP_08176015.1| deoxyadenosine kinase [Lactobacillus iners UPII 60-B] gi|329919778|ref|ZP_08276729.1| deoxyadenosine kinase [Lactobacillus iners SPIN 1401G] gi|259167430|gb|EEW51925.1| deoxyadenosine kinase [Lactobacillus iners DSM 13335] gi|308163867|gb|EFO66133.1| deoxyadenosine kinase [Lactobacillus iners LactinV 11V1-d] gi|308165800|gb|EFO68021.1| deoxyadenosine kinase [Lactobacillus iners LactinV 09V1-c] gi|311089627|gb|EFQ48052.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2053A-b] gi|311090943|gb|EFQ49338.1| deoxyadenosine kinase [Lactobacillus iners LEAF 2052A-d] gi|311093322|gb|EFQ51668.1| deoxyadenosine kinase [Lactobacillus iners LEAF 3008A-a] gi|315488866|gb|EFU78512.1| deoxyadenosine kinase [Lactobacillus iners ATCC 55195] gi|325477012|gb|EGC80162.1| deoxyadenosine kinase [Lactobacillus iners UPII 60-B] gi|328937125|gb|EGG33553.1| deoxyadenosine kinase [Lactobacillus iners SPIN 1401G] Length = 214 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 27/166 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK++ +L L + G P +L + Sbjct: 4 IVLSGPIGAGKSSLTKILADELHGQ----AFYENVDGNP--------ILPLFYKDMSKYT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSL 120 + ++H I A ++ D + DS + G DS++ L Sbjct: 52 --FLLNVYLMNHRLEQINCANKMKNSVI-DHSIYEDSVFFKMNVDNGIADSTEFKIYRDL 108 Query: 121 QEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 +++V PD I + +D LK ++ R + E D Sbjct: 109 VNNMMEDVPGSVHKKPDLLIYIHASLDTMLKHIKQRGRIFEQLSTD 154 >gi|145247871|ref|XP_001396184.1| uridylate kinase [Aspergillus niger CBS 513.88] gi|134080929|emb|CAK41445.1| unnamed protein product [Aspergillus niger] Length = 212 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 40/223 (17%), Positives = 64/223 (28%), Gaps = 58/223 (26%) Query: 6 FISFEGIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGV 59 FI G G+GK T S L R L + RE G+ + + + + Sbjct: 16 FIL--GGPGSGKGTQSSNLVRDYGFTHLSAGDLLRAEQVRE--GSQYGDLIKTYIREGKI 71 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD- 118 A++ A + AL GK Q E +D Sbjct: 72 VPM-EITVALLSNA---------MADALASGKK-------------QQEGGPKPRFLIDG 108 Query: 119 ---SLQE--ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + V P + T+ LD P ++ R+ R +D E Sbjct: 109 FPRKLDQAVFFEDTVCPSEMTLFLDCPEEVMETRLLKRGETSG---------RDDDNAES 159 Query: 173 RRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILN 206 R+ F + ++ V + S + V I Sbjct: 160 IRKRFRTFVETSMPVVKAFEEQNKVVSVTATGSVEEVYERIRE 202 >gi|126697068|ref|YP_001091954.1| adenylate kinase [Prochlorococcus marinus str. MIT 9301] gi|166980345|sp|A3PF28|KAD_PROM0 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|126544111|gb|ABO18353.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9301] Length = 182 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 77/211 (36%), Gaps = 47/211 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G GAGK T L+ + +Y T E LL ++ A Sbjct: 5 ILFLGAPGAGKGTQAELISQ---SNSYLHLSTGE-------------LLRKEIEMNTALG 48 Query: 67 EAIVFAAARLDHVENVIRPALMEGKIL------LCDRFLDSSYAYQGERDSSQHLFLDS- 119 + R + V + + ++ ++ + D + R+ SQ L+ Sbjct: 49 IQVKDIMNRGELVSDELVLKIVRQNLVKDNKGWILDGY---------PRNLSQANSLNEV 99 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR----RQ 175 L EI+ + LD+P ++ +KR+ R ++ V I++K Q Sbjct: 100 LNEINQPL---ELVFYLDIPEEVLIKRLLLRGRKDDTEETIR---TRVDIYKKTTEPLIQ 153 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 F D++ +D+ ++++++I Sbjct: 154 YFKDLSL-----IEYIDADRDLKTISSDIKQ 179 >gi|300709656|ref|YP_003735470.1| signal recognition particle-docking protein FtsY [Halalkalicoccus jeotgali B3] gi|299123339|gb|ADJ13678.1| signal recognition particle-docking protein FtsY [Halalkalicoccus jeotgali B3] Length = 397 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 23/156 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAE 67 F G+ G GKTT I+ L ++L+ + Y + A E R + E Sbjct: 206 FTGVNGVGKTTSIAKLSQYLEERGYSTVLANGDTYRAGANEQIREHARNLDTKLISHEQ- 264 Query: 68 AIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--S 124 + + + A G ++L D R + +D L++I Sbjct: 265 ----GGDPAAVIYDAVEYAQAHGIDVVLGD---------TAGRLHTNEGLMDQLEKIDRV 311 Query: 125 VQEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158 V PD T+ D + ++R + E Sbjct: 312 VG---PDMTLFTDEAVAGQDAVQRAKKFNDAAEIDG 344 >gi|198284666|ref|YP_002220987.1| sulfate adenylyltransferase large subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|198249187|gb|ACH84780.1| sulfate adenylyltransferase, large subunit [Acidithiobacillus ferrooxidans ATCC 53993] Length = 614 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 20/89 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +LL++ L + + + +L G + Sbjct: 445 FTGLSGSGKSTLANLLEKRLHAQGHHTY-----------------VLDGDNVRHGLNRDL 487 Query: 69 IVFAAARLD---HVENVIRPALMEGKILL 94 A R + V V R + G I+L Sbjct: 488 GFAEADRAENIRRVAEVARLMVDAGLIVL 516 >gi|195398863|ref|XP_002058040.1| GJ15862 [Drosophila virilis] gi|194150464|gb|EDW66148.1| GJ15862 [Drosophila virilis] Length = 299 Score = 42.7 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 33/90 (36%), Gaps = 11/90 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ +GK+T L+ + + VH+ E P A ++ E + Sbjct: 4 IVISGLPASGKSTRAHQLQEYFVARGKKVHLISENVAVPKALFEKNAFFGDSQKEKVVRS 63 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + A+R L + +++ D Sbjct: 64 D-LKSEASR----------QLNKQDVIILD 82 >gi|323135547|ref|ZP_08070630.1| sulfate adenylyltransferase, large subunit [Methylocystis sp. ATCC 49242] gi|322398638|gb|EFY01157.1| sulfate adenylyltransferase, large subunit [Methylocystis sp. ATCC 49242] Length = 631 Score = 42.7 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 53/141 (37%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L++ L + A ++L G + Sbjct: 462 FTGLSGAGKSTVANLVETKLVER-----------------HAHTIMLDGDNIRHGLNKDL 504 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + + G I+LC A+ + + + +++ Sbjct: 505 GFTDADRVENIRRIGEVAKLMVDAGLIVLC--------AFISPFKAERRMVRSLVED--- 553 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E I LD P+++ + R Sbjct: 554 GEF---IEIFLDTPLEVCIAR 571 >gi|146327006|gb|AAI41803.1| CMPK2 protein [Homo sapiens] Length = 409 Score = 42.7 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 26/186 (13%), Positives = 59/186 (31%), Gaps = 37/186 (19%) Query: 1 MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 + G F ++ EG++ GKTT + L+ V + P + R + Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC--IGQW-RKIF--DD 297 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH---- 114 A ++ + + + ++ DR+ S+ Y + S Sbjct: 298 EPTIIRRA---FYSLGNYIVASEIAKESAKSP--VIVDRYWHSTATYAIATEVSGGLQHL 352 Query: 115 --------LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + + L + + ++ + + L+R+Q R + + E Sbjct: 353 PPAHHPVYQWPEDLLKPDLILLL-------TVSPEERLQRLQGRGMEKTREEAE-LEANS 404 Query: 167 VMIHEK 172 V +K Sbjct: 405 V-FRQK 409 >gi|222055455|ref|YP_002537817.1| cytidylate kinase [Geobacter sp. FRC-32] gi|221564744|gb|ACM20716.1| cytidylate kinase [Geobacter sp. FRC-32] Length = 247 Score = 42.7 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 +GL I+ +G GAGK+T LL L Sbjct: 10 KNGLIIAIDGPSGAGKSTITKLLAERL 36 >gi|324508635|gb|ADY43642.1| Molybdopterin synthase catalytic subunit [Ascaris suum] Length = 350 Score = 42.7 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 31/195 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G AGKTT + + L+ K + + E R + E Sbjct: 16 KGTIIGIAGCTNAGKTTIARSILQKLRDKKQTATIVSQDDFFHNRELVRCI-----SKES 70 Query: 63 GAEAEAIVF----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + A VE ++ A+ +++ + + L Sbjct: 71 DPSIRFCNYDSPDAIDERRFVEAILNAAVTHDNVVV---------------EGNMLTELP 115 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 S+ + + + L L + L+R R YF++ +++ L Sbjct: 116 SVYNLISR------ILFLTLDRETCLERRLQRSDYDPPDEPGYFDQVVWPAYQRHLSNAL 169 Query: 179 DIARNQPDRCHIVDS 193 + R + DR VD+ Sbjct: 170 KLIR-ESDRLTFVDA 183 >gi|311068881|ref|YP_003973804.1| deoxyguanosIne kinase [Bacillus atrophaeus 1942] gi|310869398|gb|ADP32873.1| deoxyguanosIne kinase [Bacillus atrophaeus 1942] Length = 218 Score = 42.7 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 47/232 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ G GK++ +L L + P + + +E A+ Sbjct: 4 IVVGGMIGLGKSSVSKILGEALDSE----VFYESVDDNPILP----LFYTASEEEIQAKR 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGERDS 111 + LD I+ AL K +L DR + S+ +Q + Sbjct: 56 YPFLLQLHFLDTRFKSIKEALGSNKNVL-DRSIYEDWYFAKVNKDLGRISALEFQVYENL 114 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--VMI 169 + ++ L E+ + PD I L + L R+ R FE+ + Sbjct: 115 LNN-MMEELDELPKKA--PDLMIYLKSSFETVLYRIGLRGRD--------FEQDTSLIDY 163 Query: 170 HEKRRQIFLDIARNQP----------DRCHIVDSAHSFQSVATNILNIVWEL 211 ++ + + + N DR +V++ + V + + E+ Sbjct: 164 YKTLWEGYDEWLFNHYKASQVLVVDMDRLDVVNNPEDAEQVVQEVKQTLNEM 215 >gi|146276293|ref|YP_001166452.1| putative fructose transport system kinase [Rhodobacter sphaeroides ATCC 17025] gi|145554534|gb|ABP69147.1| fructokinase [Rhodobacter sphaeroides ATCC 17025] Length = 198 Score = 42.7 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 42/155 (27%), Gaps = 17/155 (10%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK+T L L V + L C + + Sbjct: 26 GPPGAGKSTLAEALVAALGADARLVPMDGFHFDDRV--LVARGLAHCKGAPETFDVRGFL 83 Query: 71 FAAARLDHVENVIRPALME-------GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 RL + P G ++ D D +G L+ Sbjct: 84 NLMERLRAGGEIAIPVFDRAMELARAGADVVTD--DDRILVVEGNYLLLDEEPWRRLRGF 141 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 D T+ LD+P +R+ R++ R Sbjct: 142 F------DLTLFLDVPEAELERRLLARWATRPGGA 170 >gi|302850696|ref|XP_002956874.1| adenylate kinase [Volvox carteri f. nagariensis] gi|300257755|gb|EFJ41999.1| adenylate kinase [Volvox carteri f. nagariensis] Length = 265 Score = 42.7 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 41/115 (35%), Gaps = 20/115 (17%) Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERKDV 167 + I + + PD +++ +P ++ ++RV R + + +++ Sbjct: 131 EAIEKEGIRPDLFLLIQVPDELLVERVVGRRLDPMTGAIYHLKYNPPPPEIVGRLQQRSD 190 Query: 168 MIHEKRR-------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 EK R + D +D S +V +I + E++ K+ Sbjct: 191 DTEEKCRVRVDTHNANVGAVVGYYTDVMKEIDGTKSMDAVFQDISAALDEVITKK 245 >gi|292656617|ref|YP_003536514.1| adenylate kinase [Haloferax volcanii DS2] gi|291372675|gb|ADE04902.1| Adenylate kinase [Haloferax volcanii DS2] Length = 208 Score = 42.7 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 65/233 (27%), Gaps = 57/233 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T L + T +A R + + Sbjct: 5 ILLLGAPGAGKGTQSKRLAETY---GVEHVTT--------GDALRAN-KDMETEYGTPRS 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 V ++ AL + D ++ Y R+ SQ +L + ++ Sbjct: 53 FMEKGELVPDAVVNEIVEAALED-----ADGYVLDGY----PRNLSQAEYLTEITDL--- 100 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLD----YFERKDVM 168 D I L++ ++R+ R E D ++D Sbjct: 101 ----DAVIYLNVAESELVERLTGRRVCDDCGTNFHVKFNQPEEEGVCDDCGGELVQRDDD 156 Query: 169 IHEKRRQIFLDIARNQPDRC----------HIVDSAHSFQSVATNILNIVWEL 211 E R+ L + + VD + V +I ++V + Sbjct: 157 TEETVRER-LSVFEENTEPVIEHYRDEGVLVEVDGEQTPDEVFEDIQSVVDDA 208 >gi|251797750|ref|YP_003012481.1| guanylate kinase [Paenibacillus sp. JDR-2] gi|247545376|gb|ACT02395.1| guanylate kinase [Paenibacillus sp. JDR-2] Length = 205 Score = 42.7 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 18/105 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ GL I G G GK T S+L++ + Y V TR+P Sbjct: 1 MDKGLLIVLSGPSGVGKGTVCSVLRQKVPELVYSVSATTRKPRQGEIDGINYFFKTKEQF 60 Query: 60 DEFGAEAEAIVFAAARLDHVENV----------IRPALMEGKILL 94 E A+ + +H E V + L GK ++ Sbjct: 61 KEMIAKDALL-------EHAEYVGNCYGTPRDFVESTLASGKDVI 98 >gi|269216975|ref|ZP_06160829.1| putative helix-turn-helix protein [Slackia exigua ATCC 700122] gi|269129782|gb|EEZ60866.1| putative helix-turn-helix protein [Slackia exigua ATCC 700122] Length = 563 Score = 42.7 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 35/99 (35%), Gaps = 3/99 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G AGKTT I +L L+ + Y V E R + F Sbjct: 113 IAVTGGPCAGKTTAIPVLAHELEVRGYRVVTLPEAATLLMETGMRPGI-DVSEGTFQERI 171 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + + R + + + ++LCDR + AY Sbjct: 172 LDLQLSLERAARI--TLERSADCRAVVLCDRGIMDGAAY 208 >gi|256788905|ref|ZP_05527336.1| shikimate kinase [Streptomyces lividans TK24] gi|289772792|ref|ZP_06532170.1| shikimate kinase [Streptomyces lividans TK24] gi|289702991|gb|EFD70420.1| shikimate kinase [Streptomyces lividans TK24] Length = 171 Score = 42.7 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 58/204 (28%), Gaps = 41/204 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G G GK+T LL L D T E T A + + G Sbjct: 5 LIVLVGPMGVGKSTVGQLLAERLGTGYRD---TDEDIVTAQGRAIAEIFVDEGE------ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA + +R AL E + +L G L Sbjct: 56 -------AAFRTLEKEAVRTALAEHEGVLA----------LGGGAILDADTRALLAG--- 95 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + L + V+ +KR + A ++ + E RR ++ D+A Sbjct: 96 -----QRVVYLSMDVEEAVKRTGLNAARPLLAVNPR--KQWRELMEARRHLYEDVATA-- 146 Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209 D + + V L V Sbjct: 147 --VVATDG-RTPEEVTQAALEAVE 167 >gi|167387035|ref|XP_001737996.1| hypothetical protein [Entamoeba dispar SAW760] gi|165898958|gb|EDR25682.1| hypothetical protein EDI_138600 [Entamoeba dispar SAW760] Length = 215 Score = 42.7 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 14/110 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI G G GK+T I LKR L +K +E + + +L + G+ Sbjct: 6 FIVITGGVGVGKSTLIHNLKRSLPKKER--IFIKEYIDFKPSTGKK--MLEETLKGKGSM 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGER 109 E +F +D + + A K ++ +R F+ S+ AY R Sbjct: 62 YELQLFI---IDCFKEQLEKAKQM-KYVIMERSPIDSIFIFSNEAYFQGR 107 >gi|218666793|ref|YP_002427338.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase [Acidithiobacillus ferrooxidans ATCC 23270] gi|218519006|gb|ACK79592.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase [Acidithiobacillus ferrooxidans ATCC 23270] Length = 604 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 20/89 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +LL++ L + + + +L G + Sbjct: 445 FTGLSGSGKSTLANLLEKRLHAQGHHTY-----------------VLDGDNVRHGLNRDL 487 Query: 69 IVFAAARLD---HVENVIRPALMEGKILL 94 A R + V V R + G I+L Sbjct: 488 GFAEADRAENIRRVAEVARLMVDAGLIVL 516 >gi|110803550|ref|YP_699034.1| guanylate kinase [Clostridium perfringens SM101] gi|119371206|sp|Q0SS73|KGUA_CLOPS RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|110684051|gb|ABG87421.1| guanylate kinase [Clostridium perfringens SM101] Length = 216 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L V TR P H L Sbjct: 9 NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRNPRVGEVDGVNYHFLTKEEFK 68 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + AE + + +H E + + L EGK ++ Sbjct: 69 QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 106 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E + I LP + +R+ R S + + F+ Sbjct: 107 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 157 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200 + +I +V D+ +++ Sbjct: 158 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 187 >gi|71416210|ref|XP_810144.1| adenylate kinase [Trypanosoma cruzi strain CL Brener] gi|70874634|gb|EAN88293.1| adenylate kinase, putative [Trypanosoma cruzi] Length = 260 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 73/233 (31%), Gaps = 57/233 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T + V + + R + E G A Sbjct: 52 IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98 Query: 67 EAIVFAAARLDH--VENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+ + + + V N +R L + + L D F S D Sbjct: 99 ESFIHNGEMVPNKIVINAVRKRLEQDDVKERGWLLDGFPRSQ---------------DQA 143 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYFER 164 + + ++P ++L++P I ++R++NR + + + + + Sbjct: 144 EALETSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERLIQ 203 Query: 165 KDVMIHEKRRQI---FLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWE 210 +D E + + + + ++ S +V +L +V Sbjct: 204 RDDDHRETVEARLRVYHEKLQGLKEHYGTLVETINGDQSIHAVTEGVLAVVER 256 >gi|326800902|ref|YP_004318721.1| deoxyadenosine kinase [Sphingobacterium sp. 21] gi|326551666|gb|ADZ80051.1| Deoxyadenosine kinase [Sphingobacterium sp. 21] Length = 204 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 29/177 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT LL + L ++ E P E + + Sbjct: 3 IAIVGNIGAGKTTLTGLLAKHL---GWEPQF-EEVEDNPYLED-----FYSDMKRWSFNL 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFL------- 117 + F +R H+ + + ++ DR + D AY + + Sbjct: 54 QIF-FLNSRFRHIVELQK----RNANIIQDRTIYED---AYIFAENLHDMGLMTTRDFQN 105 Query: 118 --DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171 + + I PD I L V + +Q R E+ LDY + + + Sbjct: 106 YSNIFESIVSFIKAPDLLIYLKASVPTLVDNIQLRGRDYEAGIRLDYLSKLNDKYQK 162 >gi|302346424|ref|YP_003814722.1| hypothetical protein HMPREF0659_A6678 [Prevotella melaninogenica ATCC 25845] gi|302150521|gb|ADK96782.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 357 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V + E + ++ + Sbjct: 1 MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNAAFF 57 Query: 61 EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A E + + + I + I++CDR AY Sbjct: 58 YEGEKATLEVQLALEDKFTRMAETI----DKPTIIVCDRGTMDISAYM 101 >gi|227879106|ref|ZP_03996993.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01] gi|293380139|ref|ZP_06626225.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] gi|227861300|gb|EEJ68932.1| conserved hypothetical protein [Lactobacillus crispatus JV-V01] gi|290923295|gb|EFE00212.1| conserved hypothetical protein [Lactobacillus crispatus 214-1] Length = 167 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 43/152 (28%), Gaps = 32/152 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I G G+GKTT + R L + P T E + Sbjct: 1 MMTSKLIIIRGNSGSGKTTLSKEIHRRLPHNTLLI-----PQDTVRREMLN--VKDGEKT 53 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ H I ++ K Y SQ LF D + Sbjct: 54 FALPLLENLLEYGYH--HCSYTILEGILNAKW------------YADLFKKSQQLFGDQI 99 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D+P + +KR + R+ Sbjct: 100 YAY-----------YFDIPFEETMKRHKTRHE 120 >gi|53794025|gb|AAU93603.1| cytoplasmic dynein heavy chain 2.2 [Leishmania mexicana] Length = 4470 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T +S+L++ LQ +V P R LL + Sbjct: 2119 VVLVGPSGSGKSTLLSILRKALQTMQIEVPMHVMNP-----KAMTRRCLLGYMDADTREW 2173 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAAR +V++ +LCD +++SL + Sbjct: 2174 HDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2213 >gi|21219996|ref|NP_625775.1| shikimate kinase [Streptomyces coelicolor A3(2)] gi|81545697|sp|Q9KXQ5|AROK_STRCO RecName: Full=Shikimate kinase; Short=SK gi|8249954|emb|CAB93375.1| shikimate kinase I [Streptomyces coelicolor A3(2)] Length = 171 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 59/204 (28%), Gaps = 41/204 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G G GK+T LL L D T E T A + + G Sbjct: 5 LIVLVGPMGVGKSTVGQLLAERLGTGYRD---TDEDIVTAQGRAIAEIFVDEGE------ 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA + +R AL E + +L G L Sbjct: 56 -------AAFRTLEKEAVRTALAEHEGVLA----------LGGGAILDADTRALLAG--- 95 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + L + V+ +KR + A ++ + E RR ++ D+A Sbjct: 96 -----QRVVYLSMDVEEAVKRTGLNAARPLLAVNPR--KQWRELMEARRHLYEDVATA-- 146 Query: 186 DRCHIVDSAHSFQSVATNILNIVW 209 D + + V L+ V Sbjct: 147 --VVATDG-RTPEEVTQAALDAVE 167 >gi|328866135|gb|EGG14521.1| adenylate kinase [Dictyostelium fasciculatum] Length = 271 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 42/163 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GK T + ++ + T + R V + Sbjct: 60 IALVGAPGSGKGTQSAKME---RDFGLKPIST--------GQILRQV-----ASDVSP-- 101 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY----------AYQGERDSSQHLF 116 + I+ L GK++ D F+ Y + Sbjct: 102 ------------LGKEIKAILDSGKLV-SDEFMLKVMQEYLGKMKEQGYLLDGYPRTTKQ 148 Query: 117 LDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESAC 158 + L + + MP D + LD+P ++ + R+Q+R+ S Sbjct: 149 AEDLDKWLEERKMPLDFVLYLDVPEEVLMDRIQDRWIHPSSGR 191 >gi|322492990|emb|CBZ28275.1| putative dynein heavy chain [Leishmania mexicana MHOM/GT/2001/U1103] Length = 4470 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T +S+L++ LQ +V P R LL + Sbjct: 2119 VVLVGPSGSGKSTLLSILRKALQTMQIEVPMHVMNP-----KAMTRRCLLGYMDADTREW 2173 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAAR +V++ +LCD +++SL + Sbjct: 2174 HDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2213 >gi|317401461|gb|EFV82093.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase [Achromobacter xylosoxidans C54] Length = 625 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 35/97 (36%), Gaps = 20/97 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T + L+ L + R +L Sbjct: 446 HRGKVIWFTGLSGSGKSTLANALEIALFERGR-----------------RTYILDGDNVR 488 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 G + A R++++ V + + G I+L Sbjct: 489 QGLNRDLGFTEADRVENIRRIAEVAKLMMDAGLIVLT 525 >gi|156717410|ref|NP_001096245.1| hypothetical protein LOC100124802 [Xenopus (Silurana) tropicalis] gi|134025411|gb|AAI35392.1| LOC100124802 protein [Xenopus (Silurana) tropicalis] Length = 361 Score = 42.7 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 12/102 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVL 54 I G+ G+GKTT + L +L KN VH P + + V+ Sbjct: 12 LIVL-GMAGSGKTTFVQRLAAYLHGKNSPPYVINLDPAVHEIPFPANIDIRDTVNYKEVM 70 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G ++ A R D V I + +L D Sbjct: 71 KQYTLGPNGGIVTSLNLFATRFDQVVKFIEKRQQNCRYVLID 112 >gi|328848518|gb|EGF97729.1| hypothetical protein MELLADRAFT_84506 [Melampsora larici-populina 98AG31] gi|328856009|gb|EGG05132.1| hypothetical protein MELLADRAFT_36977 [Melampsora larici-populina 98AG31] Length = 198 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 32/148 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +GL I F G+ G+GK+T + L+ L + N R +L Sbjct: 22 QTGLTIWFTGLSGSGKSTLSTKLEEILLKSNK-----------------RAFVLDGDNIR 64 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G ++ R +++ V + G I+L A+ + Sbjct: 65 KGLNSDLGFTNQDRKENIRRISEVSKLFNQSGIIVL--------VAFISPF-IDDRRLVR 115 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 L +I+ I LD ++ R Sbjct: 116 ELHQINELNF---LEIYLDSSLEALENR 140 >gi|197106198|ref|YP_002131575.1| hypothetical protein PHZ_c2737 [Phenylobacterium zucineum HLK1] gi|196479618|gb|ACG79146.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 494 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 57/189 (30%), Gaps = 34/189 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T L V + E + +L + EA Sbjct: 328 GLSGSGKSTFARAAAPQLGASPGAVIL-------RTDEIRKRLLGAPPTQAMPPEAYTPE 380 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 F A D + L G+ ++ D + ++V+ +P Sbjct: 381 FYARTYDAMIADAGAMLKAGRAVVLD------------ATFIDPALRSRAERLAVECGVP 428 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR-CH 189 I LD P + RV R A ++ + L+ R P+ Sbjct: 429 FEGIWLDAPAQVLETRVAGRTGDASDATVE------------VLRGQLE--RLDPNIGWR 474 Query: 190 IVDSAHSFQ 198 +D++ + Sbjct: 475 RIDASGAPD 483 >gi|297667950|ref|XP_002812258.1| PREDICTED: GPN-loop GTPase 1-like [Pongo abelii] Length = 391 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 40 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 99 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 100 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 136 >gi|223005897|ref|NP_009197.2| GPN-loop GTPase 1 isoform a [Homo sapiens] gi|194385160|dbj|BAG60986.1| unnamed protein product [Homo sapiens] Length = 388 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 40 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 99 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 100 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 136 >gi|119620962|gb|EAX00557.1| XPA binding protein 1, GTPase, isoform CRA_a [Homo sapiens] Length = 338 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|90075320|dbj|BAE87340.1| unnamed protein product [Macaca fascicularis] Length = 388 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 40 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 99 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 100 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 136 >gi|114576682|ref|XP_001159080.1| PREDICTED: similar to XPA binding protein 1 isoform 1 [Pan troglodytes] Length = 338 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|114576680|ref|XP_525723.2| PREDICTED: similar to XPA binding protein 1 isoform 2 [Pan troglodytes] Length = 374 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|3646130|emb|CAA09376.1| ATP(GTP)-binding protein [Homo sapiens] Length = 358 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 10 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 69 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 70 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 106 >gi|34925430|sp|Q9HCN4|GPN1_HUMAN RecName: Full=GPN-loop GTPase 1; AltName: Full=MBD2-interacting protein; Short=MBDin; AltName: Full=XPA-binding protein 1 gi|11094141|dbj|BAB17612.1| XPA binding protein 1 [Homo sapiens] gi|13938599|gb|AAH07451.1| GPN-loop GTPase 1 [Homo sapiens] gi|62702275|gb|AAX93201.1| unknown [Homo sapiens] gi|119620963|gb|EAX00558.1| XPA binding protein 1, GTPase, isoform CRA_b [Homo sapiens] gi|123993209|gb|ABM84206.1| XPA binding protein 1, GTPase [synthetic construct] gi|124000203|gb|ABM87610.1| XPA binding protein 1, GTPase [synthetic construct] gi|189066579|dbj|BAG35829.1| unnamed protein product [Homo sapiens] Length = 374 Score = 42.7 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|302857486|ref|XP_002959884.1| hypothetical protein VOLCADRAFT_108787 [Volvox carteri f. nagariensis] gi|300254034|gb|EFJ39051.1| hypothetical protein VOLCADRAFT_108787 [Volvox carteri f. nagariensis] Length = 841 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 69/212 (32%), Gaps = 46/212 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65 G G+GK T +K+ +Y A + R + S V +E E Sbjct: 559 GGPGSGKGTQCDKIKQ-----DYKCVHLS------AGDLLRAEVKSGSVVGKKCEELMRE 607 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + FA + +I GK L D F LD ++ Sbjct: 608 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFES 649 Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179 +MP + D P + KR+ R R + ++ E+ + +L Sbjct: 650 N-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQSLPVKDHYLA 708 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +CH++ + S + V + ++ L Sbjct: 709 Q-----GKCHVISAVPSPEEVYGKVKAVLTSL 735 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 73/224 (32%), Gaps = 50/224 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65 G G+GK T + LQ Y+ A + R + S V +E E Sbjct: 354 GGPGSGKGTQC---AQILQE--YECVHLS------AGDLLRAEVKSGSVVGRKCEELMRE 402 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + FA + +I GK L D F LD ++ Sbjct: 403 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFE- 443 Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179 +MP + D P + KR+ R R + ++ E+ + +L Sbjct: 444 GNIMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFHTFLEQSLPVKDHYLA 503 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +CHI+ + V +V E++ K SP ++ Sbjct: 504 Q-----GKCHIISAVPPPGEVFE----VVKEVLDKLHSPRKPQE 538 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 12/101 (11%) Query: 117 LDSLQEISVQEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK- 172 LD ++ +MP + D P + KR+ R R + ++ E+ Sbjct: 37 LDQAEQFESN-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFKTFLEQS 95 Query: 173 --RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +L +CH++ + S + V + ++ L Sbjct: 96 LPVKDHYLAQ-----GKCHVISAVPSPEEVYGKVKAVLTSL 131 Score = 37.7 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 72/225 (32%), Gaps = 46/225 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DEFGAE 65 G G+GK T + L+ Y+ A + R + S V +E E Sbjct: 157 GGPGSGKGTQC---AQILEE--YECVHLS------AGDLLRAEVKSGSVVGRKCEELMRE 205 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + FA + +I GK L D F LD ++ Sbjct: 206 GKLVPFAVTLNLLKKAMIESG---GKFFLIDGF---------------PRALDQAEQFES 247 Query: 126 QEVMPDC-TIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK---RRQIFLD 179 +MP + D P + KR+ R R + ++ E+ + +L Sbjct: 248 N-IMPCKAVLFFDCPEEEMEKRLLKRGETSGRSDDNAETIRKRFHTFLEQSLPVKDHYLA 306 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 +CHI+ + V + ++ + R S S +D Sbjct: 307 Q-----GKCHIISAVPPPGEVFEVVKKVLDGISAPRKSDGSLPED 346 >gi|284162433|ref|YP_003401056.1| adenylate kinase [Archaeoglobus profundus DSM 5631] gi|284012430|gb|ADB58383.1| adenylate kinase [Archaeoglobus profundus DSM 5631] Length = 217 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 27/110 (24%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACL-----------DYFERKDVMIHEK------- 172 D I +D+P + +KR+ R + R + + ++ ++++ Sbjct: 108 DAVIYIDVPEEEVVKRITYRRTCRNCGAVYHLIYAPPKEDNKCDKCGGELYQRDDDKEDV 167 Query: 173 RRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 RQ F + + VD S V I I+ ++ + Sbjct: 168 VRQRFKVYMENTAPLIEYYEKKGILYRVDGTKSIDEVFAQIDEILQKIAK 217 >gi|258647259|ref|ZP_05734728.1| uridine kinase [Prevotella tannerae ATCC 51259] gi|260852908|gb|EEX72777.1| uridine kinase [Prevotella tannerae ATCC 51259] Length = 207 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 51/154 (33%), Gaps = 5/154 (3%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G G+GK+T + + L + V + L D A Sbjct: 1 MIIGIAGGTGSGKSTVVRKIIAQLPAEQVSVLPQDSYYKRAPKGYSIEDLRKMNYDHPDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ R E IR + +L CDR ++ + +L Sbjct: 61 FDWELLEEHVRELRAERAIRQPVYS--VLTCDRCEETILV--KPSKVIIIEGIMALYRKE 116 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 ++++M D I +D D L RV NR + Sbjct: 117 LRDMM-DLRIYVDADPDERLIRVINRDVVERGRT 149 >gi|188591963|ref|YP_001796561.1| hypothetical protein RALTA_B0120 [Cupriavidus taiwanensis LMG 19424] gi|170938337|emb|CAP63322.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424] Length = 196 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 4/79 (5%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + EGI G+GK+T + L+ ++LQ E A L + + Sbjct: 17 RLVIVEGIMGSGKSTTMRLIAKYLQEAGQPALPVHERTEPHPVRATDE--LEHWFEPWRD 74 Query: 65 EAEAIVF--AAARLDHVEN 81 + A AR Sbjct: 75 ATPQHLADRALARWQAFVE 93 >gi|110643223|ref|YP_670953.1| ATP-binding protein YghR [Escherichia coli 536] gi|170681881|ref|YP_001745249.1| hypothetical protein EcSMS35_3269 [Escherichia coli SMS-3-5] gi|218706611|ref|YP_002414130.1| hypothetical protein ECUMN_3468 [Escherichia coli UMN026] gi|293406601|ref|ZP_06650527.1| predicted protein [Escherichia coli FVEC1412] gi|298382340|ref|ZP_06991937.1| ATP-binding protein yghR [Escherichia coli FVEC1302] gi|300900321|ref|ZP_07118500.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|301017321|ref|ZP_07182085.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|331684629|ref|ZP_08385221.1| hypothetical ATP-binding protein YghR [Escherichia coli H299] gi|110344815|gb|ABG71052.1| hypothetical ATP-binding protein YghR [Escherichia coli 536] gi|170519599|gb|ACB17777.1| conserved hypothetical protein [Escherichia coli SMS-3-5] gi|218433708|emb|CAR14625.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli UMN026] gi|291426607|gb|EFE99639.1| predicted protein [Escherichia coli FVEC1412] gi|298277480|gb|EFI18996.1| ATP-binding protein yghR [Escherichia coli FVEC1302] gi|300356211|gb|EFJ72081.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300400294|gb|EFJ83832.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|331078244|gb|EGI49450.1| hypothetical ATP-binding protein YghR [Escherichia coli H299] Length = 252 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193 >gi|238797394|ref|ZP_04640894.1| LAO/AO transport system kinase [Yersinia mollaretii ATCC 43969] gi|238718825|gb|EEQ10641.1| LAO/AO transport system kinase [Yersinia mollaretii ATCC 43969] Length = 318 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64 G GAGK+T + L + L + + V + +P GG+ + R + LS F Sbjct: 48 GTPGAGKSTFLEALGQELLAQGHKVAVIAVDPSSPISGGSILGDKTRMLNLSRAEQAFIR 107 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILL 94 + H +I G ++ Sbjct: 108 PVPSGGHLGGISQHTRELILLCEAAGYDVI 137 >gi|260592151|ref|ZP_05857609.1| hypothetical protein HMPREF0973_01590 [Prevotella veroralis F0319] gi|260535785|gb|EEX18402.1| hypothetical protein HMPREF0973_01590 [Prevotella veroralis F0319] Length = 357 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 5/106 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V + E + ++ + Sbjct: 1 MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNHAFF 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A + A L+ I + I++CDR AY Sbjct: 58 YEGEKATLEMQLA--LEDKFTRIAETITTPTIIVCDRGTMDISAYM 101 >gi|229170281|ref|ZP_04297960.1| uridine kinase [Bacillus cereus AH621] gi|228613204|gb|EEK70350.1| uridine kinase [Bacillus cereus AH621] Length = 189 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 17/88 (19%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183 D TI +D P+DI + R R D+ E IH R+ +L+ Sbjct: 104 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 154 Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D + S + I+ + Sbjct: 155 VKPNSDIVLDGSLSISEIIGQIIEELNR 182 >gi|116207038|ref|XP_001229328.1| hypothetical protein CHGG_02812 [Chaetomium globosum CBS 148.51] gi|88183409|gb|EAQ90877.1| hypothetical protein CHGG_02812 [Chaetomium globosum CBS 148.51] Length = 192 Score = 42.7 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 58/205 (28%), Gaps = 53/205 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GK+T + L H G + A + Sbjct: 21 GPAGCGKSTVAKHIADSL-------HFPFIEGDEY----------HPKANIDKMSAGIPL 63 Query: 71 FAAARLD---HVENVIRPALMEG--KILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEI 123 A R D + L +G ++L S+ Y+ + + + Sbjct: 64 TDADRWDWLTALREASIHELDKGSDGVVL----TCSALKRKYRDVIRVAPYFTPNVHLHF 119 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 I LD P ++ L+RV R + A + F + R Sbjct: 120 ----------IYLDAPEEVLLQRVSARKNHYMGANM-------------VHSQFEVLERP 156 Query: 184 QPDRC--HIVDSAHSFQSVATNILN 206 PD +D S ++V + L+ Sbjct: 157 TPDEIDVITIDVTQSQEAVKADALD 181 >gi|327403040|ref|YP_004343878.1| Deoxyadenosine kinase [Fluviicola taffensis DSM 16823] gi|327318548|gb|AEA43040.1| Deoxyadenosine kinase [Fluviicola taffensis DSM 16823] Length = 204 Score = 42.7 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 62/197 (31%), Gaps = 34/197 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GKTT +L + T + + L+ ++ + Sbjct: 3 IAVAGNIGSGKTTLTKMLAKH------------YNWETHYEDVEHNPYLNDFYEDMQRWS 50 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122 + + +R ++ + ++ DR + D+ D Sbjct: 51 FNLQIYYLNSRFTQIQEI----KNSTTHVIQDRTIYEDAFIFAPNLHSMGLMTTRDFENY 106 Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 S+ +M PD I L V + ++Q R E E + ++ + Sbjct: 107 FSLFNLMDSFVSAPDLLIYLRASVPTLVNQIQQRGREYE-------ESIRLDYLKRLNER 159 Query: 177 FLD-IARNQPDRCHIVD 192 + I+ + I+D Sbjct: 160 YEAWISTYDNGKLLIID 176 >gi|317493498|ref|ZP_07951919.1| hypothetical protein HMPREF0864_02684 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918441|gb|EFV39779.1| hypothetical protein HMPREF0864_02684 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 237 Score = 42.7 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 53/174 (30%), Gaps = 38/174 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---------LLSC 57 I+ G +G+GK+T + L L + E + L Sbjct: 17 IAIVGCDGSGKSTLAANLVNNLASQIPTELFYLGQSSGRIGEWIGRLPIIGISFSRYLRA 76 Query: 58 GVDEFGAE--------AEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 D +++ + R ++ + +G +L+ DR+ Sbjct: 77 KADCVHERPSAPPGNATTLVIYLLSYWRAYKFRKMLARS-QQGHLLITDRYPQVEVPGFR 135 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKR 146 D Q + + + ++ +L++ ++ P I LD+ R Sbjct: 136 FDGP---QLAKTAGGNWWVRTLRKRELKLYHWMASFQPLLLIRLDIDEQTAFSR 186 >gi|288802526|ref|ZP_06407965.1| conserved hypothetical protein [Prevotella melaninogenica D18] gi|288335054|gb|EFC73490.1| conserved hypothetical protein [Prevotella melaninogenica D18] Length = 357 Score = 42.7 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 9/108 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G AGKTT + + Y V + E + ++ + Sbjct: 1 MKR---IVLTGGPCAGKTTALVKIIEHFSSLGYKVFIIPEVPTLFSQAGMDYLTDNAAFF 57 Query: 61 EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 G +A E + + + I + I++CDR AY Sbjct: 58 YEGEKATLEVQLALEDKFTRMAETI----DKPTIIVCDRGTMDISAYM 101 >gi|302556655|ref|ZP_07308997.1| daunorubicin resistance ATP-binding protein DrrA [Streptomyces griseoflavus Tu4000] gi|302474273|gb|EFL37366.1| daunorubicin resistance ATP-binding protein DrrA [Streptomyces griseoflavus Tu4000] Length = 328 Score = 42.7 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 78/241 (32%), Gaps = 66/241 (27%) Query: 7 ISFE----------GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEA 49 ++FE G GAGKTT I +L L + +DV A A Sbjct: 24 VTFEVRPGEVFGLLGPNGAGKTTVIRILTTILHPSAGRAEVLGHDVV--------REASA 75 Query: 50 ARHVL-LSCGVDEFGAEA---EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 R ++ L+ E + IRP L DRF ++ A Sbjct: 76 VRRLIGLAGQYAAVDPNLTGRENLRLIGRLSQSARARIRPRASA----LLDRFDLAAAAD 131 Query: 106 QGER--DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 + R LD + Q + LD GL Q+R +L Sbjct: 132 RPVRTYSGGMRRRLDVAAALVAQPP----ILFLD-EPTTGLD-PQSRNALW--------- 176 Query: 164 RKDVMIHEKRRQI--------FLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWE 210 +I E R+ +L+ A +R +VD + + ++ ++ N V E Sbjct: 177 ---ALIRELVREGTTVLLTTQYLEEADQLAERVVVVDEGRVIADDTPAALKAHLGNTVIE 233 Query: 211 L 211 L Sbjct: 234 L 234 >gi|14521355|ref|NP_126831.1| cytidylate kinase [Pyrococcus abyssi GE5] gi|9910753|sp|Q9UZJ6|KCY_PYRAB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|5458573|emb|CAB50061.1| cmk cytidylate kinase [Pyrococcus abyssi GE5] Length = 181 Score = 42.7 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 71/221 (32%), Gaps = 48/221 (21%) Query: 1 MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G I+ G+ G+G TT L + + A R + G+ Sbjct: 1 MPKGCLVITVSGLAGSGTTTLCRNLAKHY---GFKHVY--------AGLIFRQMAKERGM 49 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A + + V+ A E +++ E + + ++ Sbjct: 50 SLEEFQKYAELHPEIDRE-VDRRQVEAAKECNVVI-------------EGRLAGWMVKNA 95 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQIFL 178 D I LD P+ + +RV R + ER+ + R+ +L Sbjct: 96 -----------DLKIWLDAPIRVRAERVAKREGISVEEAFMKIAERE-----MQNRKRYL 139 Query: 179 DIARNQPDRC----HIVDSAH-SFQSVATNILNIVWELVQK 214 ++ + I+D++ S + V + + L +K Sbjct: 140 NLYGIDINDLSIYDLIIDTSKWSPEGVFAIVKAAIDHLYEK 180 >gi|225850938|ref|YP_002731172.1| shikimate kinase [Persephonella marina EX-H1] gi|254806779|sp|C0QR76|AROK_PERMH RecName: Full=Shikimate kinase; Short=SK gi|225646155|gb|ACO04341.1| shikimate kinase [Persephonella marina EX-H1] Length = 164 Score = 42.7 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 59/196 (30%), Gaps = 42/196 (21%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK+T LL L + + + + + G F Sbjct: 11 GSGKSTVGKLLAEKL---GFRFVDIDQEIEKEEGKKIKDIFREKGESYF----------- 56 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 D + +I L +++ G + + ++E Sbjct: 57 --RDLEKRMIERFLGSKNLVVST----------GGGLGADSENMRKMKENGT-------V 97 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 I LD P++ +R + E L ++ + EKR++I+ A+ I Sbjct: 98 IWLDTPLETVFERCKG---DDERPLLKKNRKEIKELFEKRKKIY---AQAD---IRISTE 148 Query: 194 AHSFQSVATNILNIVW 209 S + IL + Sbjct: 149 GKSPYQIVNEILGRIR 164 >gi|302926112|ref|XP_003054229.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256735170|gb|EEU48516.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 236 Score = 42.7 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 58/213 (27%), Gaps = 53/213 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKTT L L + P E R+ + + Sbjct: 63 GPAGCGKTTVAEYLANTLGMPYVEGDSYHPPAN---IEKMRNGI---------PLTD--- 107 Query: 71 FAAARLD---HVENVIRPALMEG--KILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEI 123 A R D + L G ++L S+ Y+ + + L Sbjct: 108 --ADRWDWLTALREESIHRLNAGSSGVVL----TCSALKRKYRDVIRVAGYYDHRILIHF 161 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--LDIA 181 + LD ++ L RVQ R + A + F L+ Sbjct: 162 ----------VFLDAAEEVLLARVQQRQNHYMGANM-------------VHSQFDILERP 198 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +D + + V L V E + K Sbjct: 199 SSDEKDVITIDVSKTLDEVQQEALANVLETMTK 231 >gi|311252924|ref|XP_003125337.1| PREDICTED: GPN-loop GTPase 1-like, partial [Sus scrofa] Length = 389 Score = 42.7 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 42 GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 101 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 102 GPNGGIVTSLNLFATRFDQVMKFIEKAQNTSKYVLID 138 >gi|215488310|ref|YP_002330741.1| conserved predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli O127:H6 str. E2348/69] gi|312968684|ref|ZP_07782893.1| uncharacterized ATP-binding protein yghR [Escherichia coli 2362-75] gi|215266382|emb|CAS10819.1| conserved predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli O127:H6 str. E2348/69] gi|312286902|gb|EFR14813.1| uncharacterized ATP-binding protein yghR [Escherichia coli 2362-75] Length = 252 Score = 42.7 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193 >gi|157121250|ref|XP_001653777.1| KTI12 protein, putative [Aedes aegypti] gi|157121252|ref|XP_001653778.1| KTI12 protein, putative [Aedes aegypti] gi|108874649|gb|EAT38874.1| KTI12 protein, putative [Aedes aegypti] gi|108874650|gb|EAT38875.1| KTI12 protein, putative [Aedes aegypti] Length = 281 Score = 42.7 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 12/91 (13%), Positives = 32/91 (35%), Gaps = 11/91 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G+ +GK+T + ++ + + VH+ E A + Sbjct: 3 LIVITGLPSSGKSTRAAQIQNLFEDRGKTVHLVSEWKCIQLAGY------DKNDYFNDPQ 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96 E ++ + + + + L + +++ D Sbjct: 57 KEKLIRSNVKSEALR-----FLNKDDLVIVD 82 >gi|78189417|ref|YP_379755.1| guanylate kinase [Chlorobium chlorochromatii CaD3] gi|119371200|sp|Q3AQL3|KGUA_CHLCH RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|78171616|gb|ABB28712.1| guanylate kinase [Chlorobium chlorochromatii CaD3] Length = 190 Score = 42.7 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 70/214 (32%), Gaps = 38/214 (17%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG I F GAGKTT +++ + + ++ V T + + L E Sbjct: 6 SGKLIVFSAPSGAGKTTIATMVLQRIANLSFSVSATTRKQREGEQDGVNYYFLDKATFEK 65 Query: 63 ----GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G E F + + L GK LL D +D A + + L Sbjct: 66 KIEQGGFIEHEFFFGNYYGTLLDATESVLASGKNLLLD--VDVKGALNVRKLFGERSLLI 123 Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +Q P ++ ++R+Q R S ++A + ER Sbjct: 124 FIQ-----------------PPSMEVLIERLQGRGSEDDAALQERLERARFE-------- 158 Query: 177 FLDIARNQPDRCHIVDSAHS--FQSVATNILNIV 208 + A IV++ + V I+N + Sbjct: 159 -MSFADQFD--TIIVNNNLTAAVDDVEAAIVNFI 189 >gi|134085757|ref|NP_001076861.1| GPN-loop GTPase 1 [Bos taurus] gi|187657929|sp|A4FUD1|GPN1_BOVIN RecName: Full=GPN-loop GTPase 1; AltName: Full=XPA-binding protein 1 gi|133777871|gb|AAI14713.1| GPN1 protein [Bos taurus] gi|296482268|gb|DAA24383.1| GPN-loop GTPase 1 [Bos taurus] Length = 373 Score = 42.7 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 35/97 (36%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L +L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGYLHSQGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|118579606|ref|YP_900856.1| dethiobiotin synthase [Pelobacter propionicus DSM 2379] gi|118502316|gb|ABK98798.1| dethiobiotin synthase [Pelobacter propionicus DSM 2379] Length = 243 Score = 42.7 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%) Query: 1 MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR 51 M+ G+FI+ G + G GKT + L R L+ + DV V + E R Sbjct: 1 MSRGIFIT--GTDTGVGKTIVAATLARLLRMRGVDVGVMKPATSGCREEQGR 50 >gi|298528435|ref|ZP_07015839.1| Phosphoglycerate mutase [Desulfonatronospira thiodismutans ASO3-1] gi|298512087|gb|EFI35989.1| Phosphoglycerate mutase [Desulfonatronospira thiodismutans ASO3-1] Length = 432 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 74/205 (36%), Gaps = 37/205 (18%) Query: 1 MNSG----LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 MN+G L+I+ G+ GK+T + LK L+++N V + + R +L Sbjct: 27 MNNGYLNKLYIAMVGLPARGKSTVAAKLKEGLKKENIKVRIFNN------GDLRRKLLSE 80 Query: 57 CGVDEFGAEAEAIVFAAARLD----HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 E A R +++N R +G++ + D + Sbjct: 81 NSSRPDFYNPENKTNAEQREQIALTNIKNASRYLQGDGQVAILD------------ATNV 128 Query: 113 QHLFLDSLQEISVQEVMPDCTII---LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++Q + + ++ +I + + E + +D+ ++ Sbjct: 129 SLKRRRTIQNMLTDHP----VLFVECINNDDEILKASITKKTEQPEFSRMDF--QEAFES 182 Query: 170 HEKRRQIFLDIAR--NQPDRCHIVD 192 +KR Q + IA+ + +++D Sbjct: 183 FKKRIQYYEHIAQPLQEERNYYVLD 207 >gi|156390552|ref|XP_001635334.1| predicted protein [Nematostella vectensis] gi|156222427|gb|EDO43271.1| predicted protein [Nematostella vectensis] Length = 467 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 35/239 (14%), Positives = 69/239 (28%), Gaps = 68/239 (28%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G GK+ LL E + L Sbjct: 268 VVLLGPTGCGKSVQAELLASK-----------YGLINVSCTELIKQSLADGSK------- 309 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGERDSSQHLFLDSL 120 + I+P + DR F D + L L Sbjct: 310 ------------IGESIQPYI--------DRKMMGREFSDKILNLSERTKRDFLVPLQYL 349 Query: 121 QE--ISVQEVMPDCTIILDLPVDIGLKRVQNR--------------YSLRESACLDYFER 164 I +P+ + +D+P D L+R+ R R S D +R Sbjct: 350 HGTFIVGFGYIPE-VVFMDIPNDTILERLTLRSIDPVTGERYHLIYNPPRSSEVKDRLQR 408 Query: 165 ----KDVMIHEKR--RQIFLD-IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 ++ ++++ Q +++ IA + +++ +V I +I+ + ++V Sbjct: 409 NKKDQEDEVNDRTAQYQAYIEEIAECYEEIGQHINADQDIHTVFECIESIIVNRIPRKV 467 >gi|150383502|sp|Q7ZWE9|KCY_DANRE RecName: Full=UMP-CMP kinase; AltName: Full=Cytidine monophosphate kinase; AltName: Full=Cytidylate kinase; AltName: Full=Deoxycytidylate kinase; AltName: Full=Uridine monophosphate kinase; AltName: Full=Uridine monophosphate/cytidine monophosphate kinase; Short=UMP/CMP kinase; Short=UMP/CMPK Length = 196 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190 + D ++ + R R + E++ + R I +++ Q + Sbjct: 117 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 174 Query: 191 VDSAHSFQSVATNILNIVWE 210 +D++ S V ++ NI+ + Sbjct: 175 IDASRSVDEVFADVKNILEK 194 >gi|108760699|ref|YP_630810.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622] gi|108464579|gb|ABF89764.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622] Length = 213 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 58/162 (35%), Gaps = 23/162 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F++ G GAGKTT ++ + Y+ + EP R F Sbjct: 10 RFVALAGNIGAGKTTAAKMISQAF---GYE--LFDEP--VIDNRFLRDYYADMTRWSFTL 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY--AYQGERDSSQHLFLD-- 118 + E ++ R++H +I + DR + D Y + LD Sbjct: 63 QLEFLI---RRVEH-HELIHSYRRS---CVQDRTLYEDPEIFAKYLHGLGHLTNAELDLY 115 Query: 119 --SLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESA 157 Q +S + PD I ++ V++ L+R++ R E Sbjct: 116 YEYFQRLSRHIIRPDKVICFEVGSVEVLLQRIRTRGREEEKG 157 >gi|257867123|ref|ZP_05646776.1| deoxynucleoside kinase [Enterococcus casseliflavus EC30] gi|257873458|ref|ZP_05653111.1| deoxynucleoside kinase [Enterococcus casseliflavus EC10] gi|257801179|gb|EEV30109.1| deoxynucleoside kinase [Enterococcus casseliflavus EC30] gi|257807622|gb|EEV36444.1| deoxynucleoside kinase [Enterococcus casseliflavus EC10] Length = 220 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 72/237 (30%), Gaps = 58/237 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ +L+ ++A + V Sbjct: 10 IVLAGTIGAGKSSLTALIANHF-----------------GSQAFYESIDDNEVLPLFYAD 52 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS--------- 112 A + L+ I+ A+ + +L DR + DS + Sbjct: 53 PNKYAFLLQIYFLNKRFESIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVKVY 111 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + L+E+ + + PD + + + + L+R++ R E + + Sbjct: 112 DELLANMLEELPYAAHKKHPDLLVHIRVSFETMLERIEKRGR----------EYEQLTFD 161 Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH-----SFQSVATNILNIVWELVQK 214 + ++ + +D Q+ A +L +V + ++ Sbjct: 162 PSLYDYYKELNKRYDQWYEEYNESPKIQIDGDRFNFVEDPQA-AQAVLTMVEDALKD 217 >gi|257053388|ref|YP_003131221.1| cytidylate kinase [Halorhabdus utahensis DSM 12940] gi|256692151|gb|ACV12488.1| cytidylate kinase [Halorhabdus utahensis DSM 12940] Length = 192 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 53/174 (30%), Gaps = 36/174 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G+GK+T + L L + + R + Sbjct: 1 MLITVSGPAGSGKSTLAASLADAL-----------DYDHVSGGDIFRSL---ADERGMTP 46 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + + + + R + + RD + L Sbjct: 47 -----LELNKQAEEDDEIDRDLDRRLRDV--------------ARDRDDLVLESRLAGWM 87 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIF 177 + D + LD P+ + +R+ R + E A + ER + H + R+ + Sbjct: 88 AGDHA-DLKLWLDAPLSVRAERISQRENKPVEQARTETRERAESEAH-RYREYY 139 >gi|239618244|ref|YP_002941566.1| adenylate kinase [Kosmotoga olearia TBF 19.5.1] gi|259494009|sp|C5CGI1|KAD_KOSOT RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|239507075|gb|ACR80562.1| adenylate kinase [Kosmotoga olearia TBF 19.5.1] Length = 215 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 68/238 (28%), Gaps = 58/238 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----REP--GGTPAAEAARHVLLSCGVD 60 I G GAGK T + R T RE GT + + ++ + Sbjct: 3 IILLGPPGAGKGTQAKKIA---MRYGIPHISTGDMLREAVAAGTELGKKVKEIIEKGLLV 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A D ++ +P +G + D F + + +L + Sbjct: 60 PDD------LMVAIVEDRLK---KPDSAKGF--ILDGFPRTVQQAESLSGILGNLGKEL- 107 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---------------DY---F 162 D I++D P ++ ++R+ +R + D Sbjct: 108 ----------DAVILIDAPEEVVVERISSRRVCPSCGKVYNLLTIKPKNDMLCDDCNIGL 157 Query: 163 ERKDVMIHEKRRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWEL 211 +++ R+ + + +D + ++V I + L Sbjct: 158 IQREDDKPATVRERYRVYMEKTAPVINYYSEHGSLITIDGSLDIEAVTEEIFKNLENL 215 >gi|86360414|ref|YP_472302.1| hypothetical protein RHE_PE00137 [Rhizobium etli CFN 42] gi|86284516|gb|ABC93575.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 191 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 68/207 (32%), Gaps = 53/207 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64 EG G GKT+ + L+R+ Y V V G A L+ + Sbjct: 30 IEGSSGTGKTS----VASELERRGYHVVHGDRVLAYVGDPETGRA-----LAGPPEG--- 77 Query: 65 EAEAIVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSS--YAYQGERDSSQHLFLDSLQ 121 A R + I PA I D++ + + H FL Sbjct: 78 --------ADRIAWGYAHWIWPAEKVRAIA-----ADTTHPVTFFCGGSRNFHKFLHLF- 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 D +LD+ V+ +R+ R + ER V+ + R+ +L Sbjct: 124 ---------DKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRYHNTRE-YL--- 167 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 P + +D+A S V +IL + Sbjct: 168 ---PAGIN-IDAAGSVTGVVDDILAQL 190 >gi|23099616|ref|NP_693082.1| dephosphocoenzyme A kinase [Oceanobacillus iheyensis HTE831] gi|51315997|sp|Q8EPE7|COAE_OCEIH RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme A kinase gi|22777846|dbj|BAC14117.1| dephospho-CoA kinase (dephosphocoenzyme A kinase) [Oceanobacillus iheyensis HTE831] Length = 199 Score = 42.7 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 50/221 (22%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G+ G +GK+T S+L KN+ V A+ ++ G + E Sbjct: 6 GLTGGIASGKSTVSSMLLE----KNFPVI---------DADLIAREVVEPGEKAYDQILE 52 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHLFLDSLQ--- 121 A F + + + + RP L G I+ D R ++ + R+ D + Sbjct: 53 A--FGKEIIQNDQKIDRPKL--GSIIFTDEDKRKQLNAIVHPAVRNRMLTKRDDYINNDV 108 Query: 122 -----------EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 E ++ ++ D T+++ + DI L R+ R E LD + + + Sbjct: 109 PCVILDIPLLFESNLGYLV-DKTLVVYVDEDIQLTRLMKRNEYSEKEALDRI-KAQMSLK 166 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 EK D+A ++D+ S + + N++ + Sbjct: 167 EK-----ADLAD------IVIDNNQSVEETKLQLDNVLQKW 196 >gi|300703161|ref|YP_003744763.1| deoxyadenosine kinase [Ralstonia solanacearum CFBP2957] gi|299070824|emb|CBJ42121.1| putative Deoxyadenosine kinase [Ralstonia solanacearum CFBP2957] Length = 214 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 26/179 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT L L+ + P P + Sbjct: 9 IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYEA---PARYALPVQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ A RL A + G+ ++ D FL + + L L + Q Sbjct: 62 RFLLQRAQRL----TAWHKATLAGERIVADSFLPRDRLFAQLTLPADELV---LYDAMAQ 114 Query: 127 EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + P D + L + L R+ R E+ DV E+ + ++ Sbjct: 115 ALAPPPQRIDLVVCLQASAEDLLPRIAKRAVPFEAGI-------DVEYLERICAAYGEL 166 >gi|229196730|ref|ZP_04323473.1| uridine kinase [Bacillus cereus m1293] gi|228586805|gb|EEK44880.1| uridine kinase [Bacillus cereus m1293] Length = 198 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 70/219 (31%), Gaps = 49/219 (22%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN IS + G GKTT L L + + Sbjct: 13 MNKKTKVISIAAVSGGGKTTVTEGLTHKLMNS-------------------KALYFDSYT 53 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + A+ + ++ E V+ P + + + L+ D S+ Y Sbjct: 54 FDNCP-ADICKWIDDGANYNEWVLTPLIKDIQHLIRD----SNVDY-----IILDYPFAY 103 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR------ 173 L Q + D TI +D P+DI + R R D+ E IH Sbjct: 104 LNSEMRQFI--DVTIFIDTPLDIAMARRIFR---------DFKEDAMSEIHNDLKHYITY 152 Query: 174 -RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 R+ +L+ +P+ ++D A S + I ++ Sbjct: 153 ARKAYLEALHTVKPNSDIVLDGALSIDEIINQIEEELYR 191 >gi|241117264|ref|XP_002401863.1| ADP ribosylation factor 79F, putative [Ixodes scapularis] gi|215493219|gb|EEC02860.1| ADP ribosylation factor 79F, putative [Ixodes scapularis] Length = 173 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 11/32 (34%), Positives = 17/32 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34 +G I F G G+GKTT + L++ L + Sbjct: 1 AGKMIIFVGPSGSGKTTLLKRLEQHLDGRGRT 32 >gi|194431794|ref|ZP_03064085.1| conserved hypothetical protein [Shigella dysenteriae 1012] gi|194420150|gb|EDX36228.1| conserved hypothetical protein [Shigella dysenteriae 1012] gi|320180984|gb|EFW55905.1| hypothetical protein SGB_01807 [Shigella boydii ATCC 9905] gi|332088361|gb|EGI93480.1| hypothetical protein SD15574_3334 [Shigella dysenteriae 155-74] Length = 252 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIDTAISR 193 >gi|24943104|ref|NP_733866.1| ORF13 [Callitrichine herpesvirus 3] gi|13676655|gb|AAK38221.1|AF319782_15 ORF13 [callitrichine herpesvirus 3] Length = 662 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 66/186 (35%), Gaps = 30/186 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-----LLSCGVDEFG 63 FEG+ G GKTT + LK V EP + LL + Sbjct: 346 FEGVPGVGKTTMLKHLKSVF---GDLTVVFNEPMAFWTGVYENTLKRTSKLLKGRGGQTS 402 Query: 64 AEAEAIV----------FAAAR---LDHVENVIRPALMEGKILLCDRFLDSSYA-----Y 105 A+ + AAAR EN RP +L DR L ++ + Sbjct: 403 GSADLLSCQMKFATPFRVAAARKRTFYSSENGPRPVAPLDCWILHDRHLIAATVVFPLLH 462 Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFER 164 + S F+ L + ++ TI L L + L+R++ R E++ +Y +R Sbjct: 463 LKNKLLSFSDFIQLLSTFNAEDGE---TIVWLKLNMAENLRRIKKRGRRYEASNEEYLKR 519 Query: 165 KDVMIH 170 + H Sbjct: 520 VNWAYH 525 >gi|74313530|ref|YP_311950.1| hypothetical protein SSON_3130 [Shigella sonnei Ss046] gi|73857007|gb|AAZ89714.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 224 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 36/160 (22%) Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSL----- 120 F A RL + G I+L DR+ AY G + F+ L Sbjct: 83 FVARRL-LRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQER 141 Query: 121 ---QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ PD I L++ +++ R R SL + + Sbjct: 142 KAFHWMASH--KPDLVIKLNVDLEVACARKPDHKRESLARKIAI----TPQLTF------ 189 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +D+ + V + + + + R Sbjct: 190 GGAQLVD--------IDANQPLEQVLVDAEKAITDFMTAR 221 >gi|15892908|ref|NP_360622.1| adenylate kinase [Rickettsia conorii str. Malish 7] gi|20138489|sp|Q92GY7|KAD_RICCN RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|15620099|gb|AAL03523.1| adenylate kinase [Rickettsia conorii str. Malish 7] Length = 212 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + + R ++ + + Sbjct: 1 MMVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ +L + + Y G + + + Sbjct: 45 EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KR+ RYS + + DY Sbjct: 101 KEKIK---IIYFDVSDELLIKRILGRYSCKNCGKIYNRYFVQPKTDNVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IV+ + + Q + +I I+ Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210 >gi|157828839|ref|YP_001495081.1| adenylate kinase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933566|ref|YP_001650355.1| adenylate kinase [Rickettsia rickettsii str. Iowa] gi|166219998|sp|A8GT48|KAD_RICRS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|189028362|sp|B0BUN9|KAD_RICRO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|157801320|gb|ABV76573.1| adenylate kinase [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908653|gb|ABY72949.1| adenylate kinase [Rickettsia rickettsii str. Iowa] Length = 212 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ + L F + Y + + Sbjct: 45 EAELINNYVRQGELIPNEIVNQVIKNFL-LS--FEYKN-GYILDGYPRNLEQAQFFESFI 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KR+ RYS + + DY Sbjct: 101 KEKIK---IIYFDVSGELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IV+ + + Q +A +I I+ Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIAMDIQKILK 210 >gi|119587448|gb|EAW67044.1| hCG2032408, isoform CRA_f [Homo sapiens] Length = 1446 Score = 42.3 bits (99), Expect = 0.043, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 797 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 854 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 855 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 891 >gi|325971306|ref|YP_004247497.1| Iron-chelate-transporting ATPase [Spirochaeta sp. Buddy] gi|324026544|gb|ADY13303.1| Iron-chelate-transporting ATPase [Spirochaeta sp. Buddy] Length = 256 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G FI+ G G+GK+T + + + L+ V V Sbjct: 28 KGAFIALTGPNGSGKSTLLKFIYKHLKPSEGKVLV 62 >gi|91762165|ref|ZP_01264130.1| Guanylate kinase [Candidatus Pelagibacter ubique HTCC1002] gi|91717967|gb|EAS84617.1| Guanylate kinase [Candidatus Pelagibacter ubique HTCC1002] Length = 210 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 28/164 (17%), Positives = 51/164 (31%), Gaps = 23/164 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ + GAGKTT + LL + H TR+P A+ + + + Sbjct: 7 GIMVILSSPSGAGKTTLVKLLSKNKNFHISVSHTTRKPRLNEIADKDYYFVDHDKFESLI 66 Query: 64 AEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + +A + L + + ++ D +QG L Sbjct: 67 KNEEFLEYAKVFNHLYGTTRTPVIEKLEKSENVIFD------IDWQGADQIKNKKLNYKL 120 Query: 121 QEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 T + LP +I +R+ NR + + Sbjct: 121 -----------ITFFI-LPPSKEILFERLSNRDMKDKLIVEERM 152 >gi|296111521|ref|YP_003621903.1| deoxyguanosine kinase [Leuconostoc kimchii IMSNU 11154] gi|295833053|gb|ADG40934.1| deoxyguanosine kinase [Leuconostoc kimchii IMSNU 11154] Length = 213 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 27/163 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGKT+ +L L+ K P L ++G Sbjct: 2 IVLSGTIGAGKTSLTEMLADHLESK----AFYESVEDNPILP-----LFYDNPKKYGFLL 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHL 115 + I+ A GK + DR + D+ A Q E D + L Sbjct: 53 QIYFLNKRLAQ-----IKVAQSSGKNNILDRSIYEDALLFQLTADLDRATQTEVDIYKSL 107 Query: 116 FLDSLQEIS-VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRES 156 + + +I+ V ++ PD I + + + L R++ R E Sbjct: 108 VDNMMADIAGVADIKNPDLLIHVRVSFETMLDRIEKRGRSFEQ 150 >gi|229100502|ref|ZP_04231357.1| hypothetical protein bcere0020_56770 [Bacillus cereus Rock3-29] gi|229107004|ref|ZP_04237101.1| hypothetical protein bcere0019_56700 [Bacillus cereus Rock3-28] gi|228676430|gb|EEL31179.1| hypothetical protein bcere0019_56700 [Bacillus cereus Rock3-28] gi|228682884|gb|EEL36907.1| hypothetical protein bcere0020_56770 [Bacillus cereus Rock3-29] Length = 167 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T +LL L KN DV + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTANLLYDILIEKNIDVDLFLE 39 >gi|195978525|ref|YP_002123769.1| dephospho-CoA kinase CoaE [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975230|gb|ACG62756.1| dephospho-CoA kinase CoaE [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 197 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 44/221 (19%), Positives = 77/221 (34%), Gaps = 51/221 (23%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----------HVLLS 56 GI G +GK+T ++L+ ++ Y V + A+ R +LL Sbjct: 6 GITGGIASGKSTAVALI----RQAGYQVIDADQVVHELQAKGGRLYQVLLKTFGQDILLP 61 Query: 57 CGVDEFGAEAEAIVFAAARL----DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 G + AE + A + +IR AL + K + + Sbjct: 62 SGELDRPKLAELLFAHADSMAKSSQQQNAIIREALAKKK--------------EQLAQTE 107 Query: 113 QHLFLD--SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 F+D L E+ Q+ D +L + LKR+ R L E A + M Sbjct: 108 DIFFMDLPLLVELGYQDWF-DAIWLLYVDDKTQLKRLMERNQLTELAAKQRIASQLPMSQ 166 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 +K + D ++D+ Q++ T I + +L Sbjct: 167 KK---AYAD---------VVIDNNGDLQALETQISKALQDL 195 >gi|194212629|ref|XP_001917252.1| PREDICTED: similar to dynein, cytoplasmic 2, heavy chain 1 [Equus caballus] Length = 4286 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P RH LL + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2029 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2030 SDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|257057106|ref|YP_003134938.1| hypothetical protein Svir_31360 [Saccharomonospora viridis DSM 43017] gi|256586978|gb|ACU98111.1| hypothetical protein Svir_31360 [Saccharomonospora viridis DSM 43017] Length = 409 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 37/159 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FI F G+ G+G+TTH L+ L G + R +L Sbjct: 1 MFI-FRGLPGSGETTHARELRFAL------------DGTVVGCDHLRELLFGLDRYRPSN 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE A + +IR AL G+ + D + + ++ L I+ Sbjct: 48 EAE-----AQVTKTQDTMIRDALRAGRNVSVD------------DMNLRTRYVRRLLGIA 90 Query: 125 VQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACL 159 E P D T D+P++ +KR Q+R S A + Sbjct: 91 RSEATPVQIIDLT---DVPLEECIKRDQDRDSPIGEAVI 126 >gi|123966954|ref|YP_001012035.1| adenylate kinase [Prochlorococcus marinus str. MIT 9515] gi|166980349|sp|A2BYR7|KAD_PROM5 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|123201320|gb|ABM72928.1| Adenylate kinase [Prochlorococcus marinus str. MIT 9515] Length = 182 Score = 42.3 bits (99), Expect = 0.044, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 69/212 (32%), Gaps = 39/212 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 M L F G GAGK T + L +L ++ T + + ++ Sbjct: 1 MKKHLL--FLGPPGAGKGTQAAYLSEANSYLHLSTGELLRKEIDLDTYLGKQVKDIM--N 56 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + V ++ L + + + G + + Sbjct: 57 KGELVSD------------QLVLEIVNKNLSKD---------NKGWILDGYPRNLSQ--V 93 Query: 118 DSLQEISVQEVMP-DCTIILDLPVDIGLKR--VQNRYSLRESACLDYFERKDVMIHEKRR 174 +SL E+ + P + LD+P ++ +KR ++ R E + E Sbjct: 94 NSLNEVLMNINQPLEIVFYLDVPDEVLIKRLLLRGRKDDNEETIKTRL-KIYKETTEPLI 152 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + + +++ + +++ ++++ +I Sbjct: 153 EYYKNLSLLEY-----INADGDLKTISNDIKQ 179 >gi|268324773|emb|CBH38361.1| adenylate kinase [uncultured archaeon] Length = 216 Score = 42.3 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 46/147 (31%), Gaps = 23/147 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T +L + T + R L + A+ Sbjct: 3 IVLFGPPGSGKGTQAKMLAE---KYGVPHIST--------GDILRENLKNETKLGLEAKT 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEIS 124 + + V + + L++ ++ D S + G + L E+ Sbjct: 52 -----YMDKGELVPDDLLIGLIKDRLSQSD--CASGFLLDGYPRTLPQAEALSKILSELG 104 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY 151 D + +D+P LKR+ R Sbjct: 105 KNL---DLVLNIDVPDAELLKRLAGRR 128 >gi|299533619|ref|ZP_07046993.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni S44] gi|298718341|gb|EFI59324.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni S44] Length = 637 Score = 42.3 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 28/138 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +LL+ L + + LL G + Sbjct: 466 FTGLSGAGKSTIANLLETRLHARGRHTY-----------------LLDGDNVRHGLNRDL 508 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 A R++++ V GK+ F+D+ S + +++ Sbjct: 509 GFTDADRVENIRRVAEV----GKL-----FVDAGLIAITAFISPFQAEREMARKLVKDGE 559 Query: 129 MPDCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 560 F--LEVFIDTPLSVAEER 575 >gi|110798787|ref|YP_696434.1| guanylate kinase [Clostridium perfringens ATCC 13124] gi|119371205|sp|Q0TPK6|KGUA_CLOP1 RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|110673434|gb|ABG82421.1| guanylate kinase [Clostridium perfringens ATCC 13124] Length = 216 Score = 42.3 bits (99), Expect = 0.045, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L V TR P H L Sbjct: 9 NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRNPRVGEVDGVNYHFLTKEEFK 68 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + AE + + +H E + + L EGK ++ Sbjct: 69 QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 106 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E + I LP + +R+ R S + + F+ Sbjct: 107 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 157 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200 + +I +V D+ +++ Sbjct: 158 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 187 >gi|332179523|gb|AEE15212.1| Adenylate kinase [Thermodesulfobium narugense DSM 14796] Length = 216 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 58/164 (35%), Gaps = 43/164 (26%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 F G GAGK T +L L+ + R + G EA+ Sbjct: 4 VFLGAPGAGKGTQAKMLVEQLK-----------IPQISTGDMLRKAVADG--TPLGKEAK 50 Query: 68 AIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + + + V E + P G + D F R+ SQ L Sbjct: 51 SYM---DKGELVPDSVVIGLIKERLQEPDTENGF--ILDGF---------PRNVSQAKEL 96 Query: 118 DSLQEISVQEV-MP-DCTIILDLPVDIGLKRVQNRYSLRESACL 159 DSL + ++ P D ++LD+P + +KR+ R + + + Sbjct: 97 DSL----LGDLGKPLDVALVLDVPFEDLMKRLTGRRTCKSCGQM 136 >gi|324005421|gb|EGB74640.1| hypothetical protein HMPREF9532_04931 [Escherichia coli MS 57-2] Length = 256 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 27 LIAVVGCDGTGKSTLTNDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 86 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 87 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 145 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + +D + R Sbjct: 146 YYDGPGIGVERATGKIRMFLAQRERRLYQKMAQY--RPELIIRLGIDIDTAISR 197 >gi|322495227|emb|CBZ30531.1| putative dynein heavy chain [Leishmania mexicana MHOM/GT/2001/U1103] Length = 4241 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQR V P P R LL + Sbjct: 1943 VVLVGPSGSGKSTLMRVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR V+ ++CD +++SL + Sbjct: 1998 FDGVLTDAAR-----KVVEEEASVRSWIVCD-------------GDIDPAWVESLNSV 2037 >gi|227503542|ref|ZP_03933591.1| shikimate kinase [Corynebacterium accolens ATCC 49725] gi|227075578|gb|EEI13541.1| shikimate kinase [Corynebacterium accolens ATCC 49725] Length = 179 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 71/209 (33%), Gaps = 49/209 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T L L D H+ G P E + S + E Sbjct: 16 VVLIGPPGAGKSTIGRRLSHALNCDLVDSDHLIEMAEGKPCGE-----VFSEKGEPAFRE 70 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E +HV AL +G ++ S G + L+ + Sbjct: 71 LE--------TEHVAE----ALQKGGVV-------SL----GGGAVMTASTRELLERHT- 106 Query: 126 QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + LD+ + G +R +NR L ++++ I E RR +L++A Sbjct: 107 -------VVFLDISAEEGARRTAGDRNRPVLAADNPVEHY----RSIVETRRPFYLEVAD 155 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R D S Q V +IL + L Sbjct: 156 ---FRVRT-D-TRSPQQVVGDILGFLETL 179 >gi|119511160|ref|ZP_01630277.1| adenylate kinase [Nodularia spumigena CCY9414] gi|119464148|gb|EAW45068.1| adenylate kinase [Nodularia spumigena CCY9414] Length = 186 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 76/219 (34%), Gaps = 46/219 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I F G G+GK T +L L N T E R + Sbjct: 1 MTVTRLI-FLGPPGSGKGTQAQILAEDL---NIPHIST--------GEILRQAM--QEQT 46 Query: 61 EFGAEAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-QHLFL 117 G +A++ V + + V+++++ L + + S + G Q +FL Sbjct: 47 PLGIKAQSYVNSGDLVPDQLVQDLVQERLSQPDV-------KSGWILDGFPRKVTQAVFL 99 Query: 118 DS-LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-----LD--YFERKDVMI 169 + L E++ I LD P D+ + R+ +R ++ LD E ++ Sbjct: 100 EKLLAEMNQGGER---VINLDAPDDVVVARLLDRGRKDDTEAVIRHRLDVYRAETAPLID 156 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + RQ L V+ S + V + IV Sbjct: 157 YYGDRQKLL-----------TVNGDQSQEEVTHELQKIV 184 >gi|53794027|gb|AAU93604.1| cytoplasmic dynein heavy chain 2.1 [Leishmania mexicana] Length = 4241 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQR V P P R LL + Sbjct: 1943 VVLVGPSGSGKSTLMRVLRRALQRLGTKVPLYVVNPKALP-----REQLLGHMDPDTREW 1997 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR V+ ++CD +++SL + Sbjct: 1998 FDGVLTDAAR-----KVVEEEASVRSWIVCD-------------GDIDPAWVESLNSV 2037 >gi|45358246|ref|NP_987803.1| signal recognition particle-docking protein FtsY [Methanococcus maripaludis S2] gi|44921003|emb|CAF30239.1| signal recognition particle receptor SRalpha [Methanococcus maripaludis S2] Length = 383 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 15/126 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI G GKTT IS L L+ K Y + G T A A + + Sbjct: 183 GINGTGKTTSISKLAYILKEKGYSAVMAA--GDTFRAGAIEQLEEHGKNTGI--KVIKHQ 238 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 A + + I A +G ++L D R ++ +D +++ V+ Sbjct: 239 KGADSAAVIYDAISHAKAKGLNVVLAD---------TAGRQTTNINLMDEIKK-VVRVTK 288 Query: 130 PDCTII 135 PD I Sbjct: 289 PDLIIF 294 >gi|158315913|ref|YP_001508421.1| uridine kinase [Frankia sp. EAN1pec] gi|158111318|gb|ABW13515.1| putative kinase [Frankia sp. EAN1pec] Length = 230 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 51/178 (28%), Gaps = 21/178 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG-GTPAAEAARHVLLSCGVDEFGAE 65 ++ +G + AGKTT L L + V G P A R LS Sbjct: 33 VAIDGPDAAGKTTLADELAGTLADRGRPVIRASVDGFHQPQAVRRRRGSLSPEGYFLD-- 90 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLFLDSLQE 122 A + A R ++ + + D DS + ++ + L Sbjct: 91 --AFDYPALRRLLIDPLSPDGDRRYRTAAFDHRSDSPLDSPTREAAGNAVLIVDGVFLLR 148 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ D + L + L+R R + D R+ + Sbjct: 149 HELRGCW-DLAVFLQISPAESLRRA-LRRDVALFGSPD-----------AVRERYKAR 193 >gi|328881669|emb|CCA54908.1| Dephospho-CoA kinase [Streptomyces venezuelae ATCC 10712] Length = 201 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 79/218 (36%), Gaps = 37/218 (16%) Query: 11 GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFG 63 GI GAGK+ LL + L + EPG TP A +L+ Sbjct: 9 GI-GAGKSEVSRLLVSYGAVLIDADRIAREVVEPG-TPGLAAVVEAFGPEVLTVEGTLDR 66 Query: 64 AEAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++VFA A RL + ++ P + + A R + + + + Sbjct: 67 PKLGSVVFADAERLATLNAIVHPL------------VGARSAELESRAGAGDVVVHDVPL 114 Query: 123 ISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + P D +++D + L R+ + ES + R+ L + Sbjct: 115 LAENGLAPLYDLVVVVDASPETQLDRLVRLRGMAESEARARMAA------QATREQRLAV 168 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 A ++D+ ++ + VW+ +++R S Sbjct: 169 AE------LVIDNDGPLDALEPQVRK-VWDELERRASE 199 >gi|322823518|gb|EFZ29254.1| hypothetical protein TCSYLVIO_4502 [Trypanosoma cruzi] Length = 676 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 49/228 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GK+T ++ L+ + ++ Y V E +L++ G+ Sbjct: 132 ICLTGGPCGGKSTLLTQLQAKMPQRTGYKVFCVPEAAT---------LLVTGGMVWNSDL 182 Query: 66 AEAIVFAAARLD--HVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E A R+ + A+ G I++ DR A+ S+ +F L+ Sbjct: 183 IEEQQLAVLRVQIGLEDQFYNVAMASGAPSIVISDRGTMDGRAF-----CSEEIFERILR 237 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD---YFER--KDVMI 169 ++ + ++ R V +E LD +E + V Sbjct: 238 RLN-------------VTLETLRDRYDAVIHLVTAASGAKEYYNLDNPSRYENVEEAVES 284 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 +K RQ+++ P I+D++ +F+ L++V +++ +R S Sbjct: 285 DKKLRQVYV----GHPM-LRIIDNSTTFEEKMERGLSLVGQVIGQRFS 327 >gi|295692899|ref|YP_003601509.1| uridine kinase [Lactobacillus crispatus ST1] gi|295031005|emb|CBL50484.1| Uridine kinase [Lactobacillus crispatus ST1] Length = 145 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 42/158 (26%), Gaps = 33/158 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S I G G+GKTT + R L + P T E Sbjct: 1 MTS-KLIIIRGNSGSGKTTLSKEIHRRLPHNTLLI-----PQDTVRREMLNA--KDGENT 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ H I ++ K Y SQ LF D + Sbjct: 53 SALPLLENLLEYGYH--HCSYTILEGILNAKW------------YADLFKKSQQLFGDQI 98 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 D+P + +KR + R+ Sbjct: 99 YAY-----------YFDIPFEETMKRHKTRHEHSFGGA 125 >gi|206891102|ref|YP_002249627.1| adenylate kinase [Thermodesulfovibrio yellowstonii DSM 11347] gi|226743912|sp|B5YHP1|KAD_THEYD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|206743040|gb|ACI22097.1| adenylate kinase [Thermodesulfovibrio yellowstonii DSM 11347] Length = 215 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 81/246 (32%), Gaps = 78/246 (31%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 F G GAGK T L + T + R + G EA+ Sbjct: 4 VFLGAPGAGKGTQAKRLVE---KYGIPQIST--------GDLLRAAV--AAGTPLGKEAK 50 Query: 68 AIVFAAARLDHVENV-----IRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDS 119 A + R + V + ++ L + + D F R+ +Q LD Sbjct: 51 AYM---DRGELVPDKVVLGMVKERLSQNDCKKGFILDGF---------PRNVAQAEALDK 98 Query: 120 -LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL------------------ 159 L E++ MP D + LD+P D +KR+ R + + + Sbjct: 99 MLSEMN----MPLDLALNLDVPFDDLMKRLTGRRTCKSCGQMYNVYYSPSKVEGKCDKCG 154 Query: 160 -DYFERKDV--MIHEKRRQIFLDIARNQPDRCHIVD------------SAHSFQSVATNI 204 + F+R D KR +++ A+ +P ++D S + +I Sbjct: 155 GELFQRDDDKEETIRKRLEVY--RAQTEP----LIDYYSKKGILKSVSGTGSIDEIFNSI 208 Query: 205 LNIVWE 210 I+ + Sbjct: 209 CAILEK 214 >gi|158316007|ref|YP_001508515.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Frankia sp. EAN1pec] gi|158111412|gb|ABW13609.1| sulfate adenylyltransferase, large subunit [Frankia sp. EAN1pec] Length = 647 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L + Y + LL G + Sbjct: 466 FSGLSGAGKSTIANLVEKRLHEQGYHTY-----------------LLDGDNVRHGLNKDL 508 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLC 95 A R++ V V R + G I+L Sbjct: 509 GFTDADRVENIRRVAEVARLMVDAGVIVLA 538 >gi|291300200|ref|YP_003511478.1| uridine kinase [Stackebrandtia nassauensis DSM 44728] gi|290569420|gb|ADD42385.1| uridine kinase [Stackebrandtia nassauensis DSM 44728] Length = 225 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 68/202 (33%), Gaps = 27/202 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ +G + AGKTT L + + + P AE R G+ G Sbjct: 29 VAVDGPDAAGKTTLADELAPRIPAPATVIRAGIDSFHRPRAERLRR----GGLSPEGCYH 84 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS----LQE 122 + + A R +E P G R+ + + ++ +R + L L L Sbjct: 85 DTFDYDALRRQLLE----PLGPNGDR----RYRTAVFDHREDRPLDEPLRLAPPGSVLIC 136 Query: 123 ISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 V + P D ++LD+ D +R R + ER +R Sbjct: 137 DGVFLLRPQLRHHWDLRVLLDIDEDEIERRALERDASMMGGADVVRERYRRRYLPAQR-- 194 Query: 177 FLDIARNQPDRC--HIVDSAHS 196 L A P+R ++D+ Sbjct: 195 -LYRAEAAPERFADVLIDNNQP 215 >gi|261338904|ref|ZP_05966762.1| hypothetical protein ENTCAN_05101 [Enterobacter cancerogenus ATCC 35316] gi|288318728|gb|EFC57666.1| dephospho-CoA kinase [Enterobacter cancerogenus ATCC 35316] Length = 206 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 74/221 (33%), Gaps = 40/221 (18%) Query: 4 GLFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 G ++ G G+GK+T + R V P +L+ Sbjct: 2 GYIVALTGGIGSGKSTVANAFSRLGITIIDADIIARQVVEPNTPALKAIETHFGSRILNA 61 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDS 111 + +F+ D E V AL+ I YQ E S Sbjct: 62 DGTLNRRQLREYIFS----DSSEKVWLNALLHPII------------YQETQRQIAEARS 105 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 L++ L + + D +++D+ + ++R R ++ + ++ + Sbjct: 106 PYVLWVVPLLVENQLQRKADRVLVIDVSPETQIQRTMARDNVSREHA------EQILAAQ 159 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R L +A + ++D+ + ++A+++ + + + Sbjct: 160 ATRDARLAVADD------VIDNNGAPDAIASDVARLHEQYL 194 >gi|126179908|ref|YP_001047873.1| signal recognition particle-docking protein FtsY [Methanoculleus marisnigri JR1] gi|125862702|gb|ABN57891.1| signal recognition particle-docking protein FtsY [Methanoculleus marisnigri JR1] Length = 354 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT ++ + ++LQ + V + G T A A + D G + Sbjct: 159 ILFTGVNGTGKTTTVAKVGQYLQTNGFTVVI--GAGDTFRAGAIEQI--RTHADRLGIKT 214 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + ++ A ++L D R ++ ++ L +I Sbjct: 215 IQHQAGADPSAVLFDAVQYAKAHDIDVVLAD---------TAGRFHNRANLMNQLDKI-R 264 Query: 126 QEVMPDCTIILD 137 + + PD + +D Sbjct: 265 RVMKPDLVVYVD 276 >gi|91772186|ref|YP_564878.1| signal recognition particle-docking protein FtsY [Methanococcoides burtonii DSM 6242] gi|91711201|gb|ABE51128.1| signal recognition docking protein FtsY [Methanococcoides burtonii DSM 6242] Length = 366 Score = 42.3 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 17/146 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT IS + + L+ Y V + G T A A + + + G + Sbjct: 174 IVFIGINGTGKTTTISKMAKRLKDMKYSVVIAA--GDTFRAGAIDQIAIH--AERIGVKL 229 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 V + ++ A ++L D R + + L++ Sbjct: 230 IKHQEGGDPAAVVYDAVQHAKAHNVDVVLSD---------TAGRMHTNVNLMAQLEK-VC 279 Query: 126 QEVMPDCTIILD--LPVDIGLKRVQN 149 + PD I +D + + ++R Q Sbjct: 280 RVSSPDLIIFVDEAVAGNDAVERAQQ 305 >gi|326925346|ref|XP_003208877.1| PREDICTED: UMP-CMP kinase-like [Meleagris gallopavo] Length = 281 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 24/149 (16%) Query: 78 HVENVIRPALMEGKIL-------LCDRFLDSSYAY--QGERDSSQHLFL--DSLQEIS-V 125 +I + EG+I+ L R +D + A Q + D+LQ + Sbjct: 133 QYGELIENYIKEGEIVPVEITISLLKRAMDQTMAANSQKNKFLIDGFPRNEDNLQGWNKT 192 Query: 126 QEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRR---QIFL 178 + D + D +I + R R + + E++ + R ++ Sbjct: 193 MDGKADVSFVLFFDCDNEICIGRCLERGKSSGRSDDNRESLEKRIHTYLQSTRPIIDLYE 252 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNI 207 + + VD++ S V ++ I Sbjct: 253 RM-----GKVRRVDASKSVDEVFEKVVQI 276 >gi|264678163|ref|YP_003278070.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni CNB-2] gi|262208676|gb|ACY32774.1| sulfate adenylyltransferase, large subunit [Comamonas testosteroni CNB-2] Length = 637 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 28/138 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +LL+ L + + LL G + Sbjct: 466 FTGLSGAGKSTIANLLETRLHARGRHTY-----------------LLDGDNVRHGLNRDL 508 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 A R++++ V GK+ F+D+ S + +++ Sbjct: 509 GFTDADRVENIRRVAEV----GKL-----FVDAGLIAITAFISPFQAEREMARKLVKDGE 559 Query: 129 MPDCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 560 F--LEVFIDTPLSVAEER 575 >gi|229146221|ref|ZP_04274596.1| hypothetical protein bcere0012_33660 [Bacillus cereus BDRD-ST24] gi|228637280|gb|EEK93735.1| hypothetical protein bcere0012_33660 [Bacillus cereus BDRD-ST24] Length = 195 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 25/164 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT + L+R + V P P E + + L E Sbjct: 8 ISLQGPMASGKTTL----AKRLERCGFSVIY-ENP--YPIVEKRKRLKLDMNSKEG---- 56 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118 F A + +E I+ +G +++ DR + G+ ++ D Sbjct: 57 ----FIANQKMFIEAKIKDFQNAKGSVVIFDRGPEDIEFYTLFYPMVIGKEWDIENELKD 112 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L ++ +E D LD+ R N + S + F Sbjct: 113 ELYKL--RECRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 154 >gi|159898271|ref|YP_001544518.1| adenylylsulfate kinase [Herpetosiphon aurantiacus ATCC 23779] gi|159891310|gb|ABX04390.1| Adenylyl-sulfate kinase [Herpetosiphon aurantiacus ATCC 23779] Length = 184 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 M+ G I F G+ GAGK+T + L L+ + V Sbjct: 1 MSQGYIIWFTGLSGAGKSTIAAALAEVLREREQRV 35 >gi|297619379|ref|YP_003707484.1| signal recognition particle-docking protein FtsY [Methanococcus voltae A3] gi|297378356|gb|ADI36511.1| signal recognition particle-docking protein FtsY [Methanococcus voltae A3] Length = 399 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI G GKTT IS L L++ + + + G T A A L + + Sbjct: 195 IIFLGINGTGKTTSISKLAYKLKQNGHSIVMAA--GDTFRAGAIEQ--LEEHANNLEVKV 250 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + I+ A + ++L D R ++ + +++ V Sbjct: 251 IKHQKGADSAAVIFDAIQHAKAKKIDVVLAD---------TAGRQTTNINLMSEIKK-VV 300 Query: 126 QEVMPDCTII 135 + PD + Sbjct: 301 RVTKPDLVVF 310 >gi|282891793|ref|ZP_06300274.1| hypothetical protein pah_c197o112 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498377|gb|EFB40715.1| hypothetical protein pah_c197o112 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 191 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 61/209 (29%), Gaps = 35/209 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I GI GAGK+T L + L L DE Sbjct: 9 IGISGISGAGKSTLTKRLAKTLNA---------------------TALFWDDFDEISQGP 47 Query: 67 EAIVFAAARLDHVENVIRPALM-------EGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E V + ++ I L G+ ++C + L Sbjct: 48 EDYVHWFETSHNYDDWIYDDLAATLKVLKRGQTIVC---PATKKELIPTPYILFDAPLGY 104 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + Q + D I LD P DI L R R R L + K R +FL Sbjct: 105 CHHATGQHI--DFLICLDTPPDIALARRLLR-DYRSQDNLQRVLNELEGYLLKSRPLFL- 160 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A + + ++D + S L + Sbjct: 161 LAPEEKECDLMIDGSLSLDEQEARALKFL 189 >gi|289581485|ref|YP_003479951.1| signal recognition particle-docking protein FtsY [Natrialba magadii ATCC 43099] gi|289531038|gb|ADD05389.1| signal recognition particle-docking protein FtsY [Natrialba magadii ATCC 43099] Length = 470 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 17/155 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L R+ + + Y + G T A A + + + Sbjct: 276 IIFTGVNGVGKTTSIAKLSRYFEERGYSTVMA--NGDTYRAGANEQI--QEHANALDTKL 331 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + A ++L D R + +D L++I Sbjct: 332 ITHEQGGDPAAVLYDAVEYAEANDVDVVLGD---------TAGRLHTDEGLMDQLEKID- 381 Query: 126 QEVMPDCTIILD--LPVDIGLKRVQNRYSLRESAC 158 + V PD T+ +D + + R + + E Sbjct: 382 RVVDPDMTLFVDEAVAGQDAVNRAREFNNAAEIDG 416 >gi|158312695|ref|YP_001505203.1| adenylate kinase [Frankia sp. EAN1pec] gi|158108100|gb|ABW10297.1| adenylate kinase [Frankia sp. EAN1pec] Length = 218 Score = 42.3 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 45/237 (18%), Positives = 73/237 (30%), Gaps = 73/237 (30%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDEFGA 64 G++G+GK T L+ L + V V R T R ++ S + Sbjct: 5 VIMGVQGSGKGTQAKLMADELDLVHISVGDVFRWNVQNHTKIGAQVRRIVASGHLVGD-- 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKI---LLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 D VE+V+R L E + D F + A Q E L+ Sbjct: 63 ------------DLVESVVRTRLTEHDWNYGFIIDGFPRN--ARQAEF---------FLE 99 Query: 122 EISVQEVMPDCTIILDLPVD-----IGLKRVQNRYSLRESACLDYFERKDV--------- 167 + I LDLP + + +R+ +R L + + +D Sbjct: 100 SYDIDG-----VIYLDLPDEEVVRRVLARRLCSRCGLDYNLIASRPQIEDTCDVCGGALV 154 Query: 168 ---------------MIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 H K R +IF ++ +VD+ S V I + Sbjct: 155 TRSDDNPEALAVRLSEYHAKTRPVMEIFQR-----KEQVAVVDARRSVLEVQAEIRD 206 >gi|323343517|ref|ZP_08083744.1| deoxynucleoside kinase [Prevotella oralis ATCC 33269] gi|323095336|gb|EFZ37910.1| deoxynucleoside kinase [Prevotella oralis ATCC 33269] Length = 210 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 65/197 (32%), Gaps = 34/197 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I+ G G+GKTT ++L ++ G P E + LS + Sbjct: 3 IAIAGNIGSGKTTLTTMLAKY-------------YGWIPRFEPVDVNPYLSDYYKDISRW 49 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--------FLDSSYAYQGERDSSQHLFL 117 + + ++I + ++ DR F ++ A D ++ Sbjct: 50 S-FNMEIYFLKQRFNDLIEISHST-DTVIQDRSIFEGVYVFTATNKAMGNLSDRDYQTYM 107 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-DVMIHEKRRQI 176 D + + +PD I L V + +Q R +E++ + E + Sbjct: 108 DLFDSMMMIVNLPDLMIYLRASVPTLVANIQKRGRD--------YEQEMKLEYLENLNKR 159 Query: 177 FLD-IARNQPDRCHIVD 192 + D I R ++D Sbjct: 160 YEDFIFDKYKGRLLVID 176 >gi|300868394|ref|ZP_07113019.1| Guanylate kinase [Oscillatoria sp. PCC 6506] gi|300333612|emb|CBN58207.1| Guanylate kinase [Oscillatoria sp. PCC 6506] Length = 186 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 56/175 (32%), Gaps = 26/175 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M +G I G G GK T + L + + V TR P + + Sbjct: 1 MTNGRLIVLTGPSGVGKGTLVRSLLQRHSQLYLSVSVTTRSPREGEIEGKHYYFVSRSKF 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVI---RPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E + +A + I + + EGK+++ + Sbjct: 61 LQMVEAGELLEWAEFAGNLYGTPIESVKQGIQEGKLVVL---------------EIELEG 105 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 +++ + + I + LP D +R+++R E A +R I Sbjct: 106 ARQIRDTFPEALR----IFI-LPPSWDELERRLRSRGQDSEDAIARRLQRAKEEI 155 >gi|297527189|ref|YP_003669213.1| protein of unknown function ATP binding protein [Staphylothermus hellenicus DSM 12710] gi|297256105|gb|ADI32314.1| protein of unknown function ATP binding protein [Staphylothermus hellenicus DSM 12710] Length = 261 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 12/100 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDV----------HVTREPG-GTPAAEAARHVL 54 +I G G+GKTT S L+ +L D + +P +AR V+ Sbjct: 4 YIVVLGTAGSGKTTLASALQDYLINNGMDATIVNLDPAVEILPYKPDIDAREYVSAREVM 63 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 + G+ GA A+ A R++ ++ + +L I+L Sbjct: 64 RTHGLGPNGALIAAVDMLALRIEELKEEVW-SLKSNYIIL 102 >gi|169342674|ref|ZP_02863715.1| guanylate kinase [Clostridium perfringens C str. JGS1495] gi|170763962|ref|ZP_02636244.2| guanylate kinase [Clostridium perfringens B str. ATCC 3626] gi|182420488|ref|ZP_02642660.2| guanylate kinase [Clostridium perfringens NCTC 8239] gi|182625823|ref|ZP_02953589.1| guanylate kinase [Clostridium perfringens D str. JGS1721] gi|169299180|gb|EDS81250.1| guanylate kinase [Clostridium perfringens C str. JGS1495] gi|170711315|gb|EDT23497.1| guanylate kinase [Clostridium perfringens B str. ATCC 3626] gi|177908857|gb|EDT71349.1| guanylate kinase [Clostridium perfringens D str. JGS1721] gi|182380893|gb|EDT78372.1| guanylate kinase [Clostridium perfringens NCTC 8239] Length = 215 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L V TR P H L Sbjct: 8 NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRNPRVGEVDGVNYHFLTKEEFK 67 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + AE + + +H E + + L EGK ++ Sbjct: 68 QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 105 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E + I LP + +R+ R S + + F+ Sbjct: 106 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 156 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200 + +I +V D+ +++ Sbjct: 157 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 186 >gi|18653827|ref|NP_570761.1| thymidine kinase [Macacine herpesvirus 5] gi|4494925|gb|AAD21347.1| thymidine kinase [Macaca mulatta rhadinovirus 17577] Length = 557 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 29/194 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLL 55 + I EG+ G GKTT ++ + + ++N V EP + + R ++ Sbjct: 228 RNAFLIYLEGVMGVGKTTLLNSMTGMVPQEN--VLSCPEPMKFWTCVYSNCLKEQRSIVK 285 Query: 56 SCGVDEFGAEAEAI-------VFAAARLDHVENVIRPAL-MEGK-----ILLCDRFLDSS 102 + A + A + ++P L G ++ DR L S+ Sbjct: 286 QGTHGKLITSARVYACQSKFALPFRATAAGIGRNLQPWLVGNGSTKPANWIVFDRHLLSA 345 Query: 103 -----YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + + L S + D ++L L +R+Q+R E Sbjct: 346 TVVFPLVHVKYNRLTPDHLFQILSLFSAHDG--DVVVLLTLNSSEAHRRIQSRGRKEEKG 403 Query: 158 -CLDYFERKDVMIH 170 +Y + H Sbjct: 404 ITQNYLRQVAWAYH 417 >gi|325117024|emb|CBZ52577.1| putative adenylate kinase [Neospora caninum Liverpool] Length = 371 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 34/147 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-EFGAEAEAI 69 G +GK T +LLK L + R V G E GA +A Sbjct: 138 GPPCSGKGTLAALLKEKLGML-----------HCSTGDLLRQVAKEEGEKSEVGAAMKAG 186 Query: 70 VFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 R+ + V++ A+ + K ++ D F +D L+E+ Sbjct: 187 KLVNDRV--IVRVLQDAMAKNAKAECKGIILDGF------------PRNGAQVDVLREM- 231 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY 151 ++ PD + ++++P + L+R+ R Sbjct: 232 --KLWPDVSFLINVPHETLLRRMAARR 256 >gi|195110359|ref|XP_001999749.1| GI22905 [Drosophila mojavensis] gi|193916343|gb|EDW15210.1| GI22905 [Drosophila mojavensis] Length = 197 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 59/216 (27%), Gaps = 57/216 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T S + Q + A + R G + Sbjct: 13 GGPGAGKGTQCSKIVERFQFE-----------HLSAGDLLREERSREGSE---------- 51 Query: 71 FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125 +I + GKI+ + S + +D + ++ Sbjct: 52 --------YGQLIEEYIRNGKIVPVEV----TCSLLENAMKNSGKSRFLIDGFPRNQDNL 99 Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 M D T + D D+ +KR R D E +KR Q + Sbjct: 100 DGWNRQMSDKTEMQFVLFFDCAEDVCVKRCLGRGQSGSGRSDDNMES-----LKKRIQTY 154 Query: 178 ----LDIAR--NQPDRCHIVDSAHSFQSVATNILNI 207 L I + + +D++ V + + Sbjct: 155 NNDSLPIIKYFENAGQVKRIDASPDADKVFQEVERV 190 >gi|157364897|ref|YP_001471664.1| deoxynucleoside kinase [Thermotoga lettingae TMO] gi|157315501|gb|ABV34600.1| deoxynucleoside kinase [Thermotoga lettingae TMO] Length = 219 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 64/212 (30%), Gaps = 44/212 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC---GVDEFG 63 I EG GAGKT + +L+ + K G ++ +L + Sbjct: 4 IVVEGTVGAGKTALVEILE---KEKGMT-------GFYEMSDDLADAILERYYADKSRWC 53 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----------QGERDSSQ 113 E L +R A K + DR + + Q Sbjct: 54 LTMELYFLHKRFLQ-----VRSANQTHKAV-MDRSMMGDLVFVRMQKQLGFLQPIEYKVY 107 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER----KDVM 168 F ++ EI P I + V L+R++ R E Y+E+ D Sbjct: 108 ESFFRTMSEI---SPTPRLLIYIKCSVKTALERIEKRGRAYEINVEKSYWEQLCQFYDEA 164 Query: 169 IHEKRRQIFL-------DIARNQPDRCHIVDS 193 E L D N+ DR ++D+ Sbjct: 165 FMEFHNGNVLIINGDEIDFVENESDRALVLDA 196 >gi|95929494|ref|ZP_01312237.1| cytidylate kinase [Desulfuromonas acetoxidans DSM 684] gi|95134610|gb|EAT16266.1| cytidylate kinase [Desulfuromonas acetoxidans DSM 684] Length = 227 Score = 42.3 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 20/34 (58%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34 MNS L I+ +G GAGK+T LL + L N D Sbjct: 1 MNSKLIIAIDGPSGAGKSTLSRLLSQQLNYINID 34 >gi|116791464|gb|ABK25989.1| unknown [Picea sitchensis] Length = 174 Score = 42.3 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 28/123 (22%) Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----ERKDVMIHEKRRQIF---- 177 + PD I+LD+P +I ++RV R + + + E +++ + Q F Sbjct: 49 GIRPDLFILLDVPDEILVERVVGRRLDPVTGKIYHLKYSPPETEEIA--RRLTQRFDDTE 106 Query: 178 --------------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL---VQKRVSPLS 220 D+ N + VD + V I + EL ++++ + + Sbjct: 107 EKVKLRLKTHHKNLEDVLSNFTNLIWKVDGNRPKEQVFAEIDAAIAELERKLERKQTEVK 166 Query: 221 SKK 223 +K Sbjct: 167 AKA 169 >gi|157736797|ref|YP_001489480.1| guanylate kinase [Arcobacter butzleri RM4018] gi|315635977|ref|ZP_07891238.1| guanylate kinase [Arcobacter butzleri JV22] gi|157698651|gb|ABV66811.1| guanylate kinase [Arcobacter butzleri RM4018] gi|315479761|gb|EFU70433.1| guanylate kinase [Arcobacter butzleri JV22] Length = 205 Score = 42.3 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G + G G GK+T + + + + + + TREP + + Sbjct: 4 KKGAILIISGPSGCGKSTLLKEVYKNISDYYFSISTTTREPRVGEVNGVDYFFVSKEEFE 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCD 96 E + +A ++ ++P AL EGK+++ D Sbjct: 64 EDIKNGNFLEYAKVHDNYYGTSLKPIINALNEGKLVIFD 102 >gi|118085134|ref|XP_417173.2| PREDICTED: similar to dynein cytoplasmic heavy chain 2 [Gallus gallus] Length = 4301 Score = 42.3 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +LK L + V T P P RH LL + Sbjct: 1972 VVIVGPSGAGKSTLWQMLKAALGKTGKVVKQYTMNPKAMP-----RHQLLGHIDMDTREW 2026 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ +AR V+R ++CD +++SL + Sbjct: 2027 SDGVLTNSAR-----QVVREPQGTTSWIICD-------------GDIDPEWIESLNSV 2066 >gi|225872808|ref|YP_002754265.1| adenylyl-sulfate kinase [Acidobacterium capsulatum ATCC 51196] gi|225793790|gb|ACO33880.1| adenylyl-sulfate kinase [Acidobacterium capsulatum ATCC 51196] Length = 315 Score = 42.3 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 17/86 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G + G+ G+GKTT FL+ + V +L Sbjct: 19 MKKGKVVWMTGLSGSGKTTLCRAASAFLRARGEQVQ-----------------ILDGDEL 61 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPA 86 G ++ A R++++ A Sbjct: 62 RKGLSSDLCFSIADRMENIRRTAELA 87 >gi|167043737|gb|ABZ08429.1| putative SRP54-type protein, GTPase domain protein [uncultured marine crenarchaeote HF4000_APKG3B16] Length = 441 Score = 42.3 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 17/127 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT S L RFL ++ Y V V P A R + V+ +G E Sbjct: 106 GIQGSGKTTVASKLARFLSKQGYRVGVIGADTFRPGALVQLRTMCEKSDVEVYGDEK--- 162 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 V+N ++ I+L D R + LD +++I+ Sbjct: 163 --NKDSPQVVKNGLKHFESSNLDIILID---------TAGRHKEEKDLLDEMKQINKAA- 210 Query: 129 MPDCTII 135 PD ++ Sbjct: 211 SPDLALL 217 >gi|13431656|sp|Q9RS38|KGUA_DEIRA RecName: Full=Guanylate kinase; AltName: Full=GMP kinase Length = 239 Score = 42.3 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 44/230 (19%), Positives = 77/230 (33%), Gaps = 52/230 (22%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSC 57 GL I G G GK T R+L DV TREP +V +S Sbjct: 18 RGLLIVVTGASGVGKGTLRE---RWL--AGQDVFYSTSWTTREPRPGEVNGR-DYVFVSP 71 Query: 58 GVDEFGAEAEAIVFAAARL-DHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQ 113 A+ + A + +H I P AL G+ ++ + ++ A Q + + Sbjct: 72 AEFLAKAQQNGFLEHAQFVGNHYGTPIEPIEAALERGQDVVLE--IEVEGAMQVKDRMGE 129 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 I +P L ++ R + R + + E++ + Sbjct: 130 QAI---------------LVFI--MPP--SLTELRRRLTGRATETPERIEKR----LTRA 166 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 R +I R IV+ N+ V EL+ + + +++K Sbjct: 167 RD---EIQAAHDFRYVIVN---------DNLDRAVSELLAVQQAERAAQK 204 >gi|228475285|ref|ZP_04060010.1| deoxypurine kinase [Staphylococcus hominis SK119] gi|314937115|ref|ZP_07844462.1| deoxynucleoside kinase family protein [Staphylococcus hominis subsp. hominis C80] gi|228270750|gb|EEK12159.1| deoxypurine kinase [Staphylococcus hominis SK119] gi|313655734|gb|EFS19479.1| deoxynucleoside kinase family protein [Staphylococcus hominis subsp. hominis C80] Length = 220 Score = 42.3 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 48/164 (29%), Gaps = 28/164 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L L + + E + L ++F + Sbjct: 12 ITIAGTVGVGKSTLTQALADKLNFR-----TSFENVD-------HNPYLDKFYNDFERWS 59 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117 + F A R + G + DR + +A QG Sbjct: 60 FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMSKEDFKTY 115 Query: 118 DSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 L E ++ PD I LD D + R+ R E Sbjct: 116 SELFEAMVMTPYFPKPDVLIYLDCDYDEVIDRIHQRGRDMEMNT 159 >gi|312143919|ref|YP_003995365.1| guanylate kinase [Halanaerobium sp. 'sapolanicus'] gi|311904570|gb|ADQ15011.1| guanylate kinase [Halanaerobium sp. 'sapolanicus'] Length = 192 Score = 42.3 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 57/178 (32%), Gaps = 28/178 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 MN G+ G G GK T + L + +Y V TRE + Sbjct: 1 MNKGILFVLSGPSGVGKNTVLDELFKEFDGVSYSVSATTREARNGEIEGEDYFFISEDKF 60 Query: 60 DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E A+ + +A H + + L EG+ ++ + +D+ A Q Sbjct: 61 KEISAD-NGFIESALVHGHYYGTPKKFVDKKLSEGEDIILE--IDTQGAKQ--------- 108 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 V+E PD I LP + R+ R S A E + E Sbjct: 109 ---------VREKYPDAVYIFLLPPSLEELEHRLDKRGSENNKAKNIRLENARKELKE 157 >gi|256544527|ref|ZP_05471900.1| adenylate kinase [Anaerococcus vaginalis ATCC 51170] gi|256399852|gb|EEU13456.1| adenylate kinase [Anaerococcus vaginalis ATCC 51170] Length = 214 Score = 42.3 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 54/235 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I G GAGK T L + L D+ T TP A+ ++ G Sbjct: 3 IILLGPPGAGKGTQAEKLIKELDAVQISTGDIFRTNIKNNTPLGAKAKE-YMNKGQLVPD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +V D ++ V +GK +L D F + Q E D +I Sbjct: 62 ELTIDLV-----WDALDKV-----EDGKSILLDGFPRNIT--QAEALDEGMQKRD--NKI 107 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY------------------SLRESACLDYFERK 165 D I +++P D+ ++R+ R + + ++ Sbjct: 108 -------DKVININVPEDVIIERISGRRVNVSTGKVYHIKFNPPKVEGIDDETGEKLIQR 160 Query: 166 DVMIHEKRRQIFLDIARNQ----------PDRCHIVDSAHSFQSVATNILNIVWE 210 + ++ LD+ +D A + + V I+ + + Sbjct: 161 EDDTEAAVKER-LDVYNKHTSVLIDYYNKKGILVTIDGAKTPEEVFDQIIKSLEK 214 >gi|219849866|ref|YP_002464299.1| nucleoside-triphosphate--adenylate kinase [Chloroflexus aggregans DSM 9485] gi|219544125|gb|ACL25863.1| Nucleoside-triphosphate--adenylate kinase [Chloroflexus aggregans DSM 9485] Length = 222 Score = 42.3 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 48/158 (30%), Gaps = 39/158 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T L + + R L A++ Sbjct: 8 GPPGAGKGTQAKTLADR-----------TGLTHVASGDLFRAALREGTELGMLAKS---- 52 Query: 71 FAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 R + V E + +P G ++ D F + Q + + + Sbjct: 53 -YMDRGELVPDEVVIRMILERIRQPDCASG--VIFDGFPRT----QDQARALE------- 98 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 + ++ D + L +P ++ L+R+ R + R Sbjct: 99 EALAKDGARIDAVLFLAVPQEVLLRRIAGRQTCRTCGA 136 >gi|319953645|ref|YP_004164912.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Cellulophaga algicola DSM 14237] gi|319422305|gb|ADV49414.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Cellulophaga algicola DSM 14237] Length = 381 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 60/191 (31%), Gaps = 22/191 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKTT S + K P E F E Sbjct: 180 FIAIEGNIGAGKTTLASRISDDFNAKLILERFADNPFLPKFYE-------DQARYAFPLE 232 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124 F A R + + ++ D + S + + L + Sbjct: 233 MS---FLAERYQQFTDDTSQFDLFKSFMVSDYDIFKSLIFAKVTLQEEEFKLYRKVFNFM 289 Query: 125 VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 +EV P + L + L+ ++ R E DY E K + +LD + Sbjct: 290 HKEVKKPGLYVYLYQNTERLLENIKKRDRDYEQNIPPDYLE--------KINRGYLDFIK 341 Query: 183 NQPD-RCHIVD 192 + PD IVD Sbjct: 342 SAPDHNTLIVD 352 >gi|257865737|ref|ZP_05645390.1| adenylylsulfate kinase [Enterococcus casseliflavus EC30] gi|257872072|ref|ZP_05651725.1| adenylylsulfate kinase [Enterococcus casseliflavus EC10] gi|257799671|gb|EEV28723.1| adenylylsulfate kinase [Enterococcus casseliflavus EC30] gi|257806236|gb|EEV35058.1| adenylylsulfate kinase [Enterococcus casseliflavus EC10] Length = 178 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 67/213 (31%), Gaps = 50/213 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGT-PAAEAARHVLLSCGV 59 M G I G+ +GKTT + L R + P+A + + L Sbjct: 1 MKKGKVIVVSGVTASGKTTLVRELSRL--ADGIVISFDDYSIDALPSAPSFDYFLQDPRA 58 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + ++ R + +I F+D + Y +H L Sbjct: 59 AINQYDISLLLKDLKRAMLLYPII--------------FVDFPFGY-------EHQDLRQ 97 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFE---RKDVMIHE 171 L D I L P+DI R R ES + D + R+ ++HE Sbjct: 98 LI---------DTVIYLKTPLDIAFARQIKRDYTNESKEVILTWADTYLSYARELFVLHE 148 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNI 204 + IA +++D A +A + Sbjct: 149 QI------IAETAD---YVLDGARPADQLAEQV 172 >gi|239626790|ref|ZP_04669821.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516936|gb|EEQ56802.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 614 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 14/98 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-------NYDVH-VTREPGGTPAAEAARH 52 +++G I+ G GAGKTT + LL RF + +++ TR + + Sbjct: 397 IHAGQTIAIVGPTGAGKTTVVKLLMRFYELNSGSIFIDGHNILDFTRNGLRSVFGMVLQE 456 Query: 53 VLLSCGVDEFG------AEAEAIVFAAARLDHVENVIR 84 L + + V AAAR H + IR Sbjct: 457 TWLYSASIMDNIRYGNFDKTDEEVMAAARTAHCDEFIR 494 >gi|222109202|ref|YP_002551467.1| sulfate adenylate transferase subunit 1 [Agrobacterium vitis S4] gi|221738476|gb|ACM39341.1| sulfate adenylate transferase subunit 1 [Agrobacterium vitis S4] Length = 636 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 20/89 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +LL++ L + LL G + Sbjct: 459 FTGLSGAGKSTIANLLEKRLHARGQH-----------------SYLLDGDNLRHGLNYDL 501 Query: 69 IVFAAARLDHVENVIRPA---LMEGKILL 94 AA R++++ V A G I++ Sbjct: 502 GFKAADRVENIRRVTEVARLMADAGLIVI 530 >gi|288919267|ref|ZP_06413603.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f] gi|288349362|gb|EFC83603.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f] Length = 640 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 34/144 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L + + + LL G + Sbjct: 466 FTGLSGAGKSTIANLVEKRLHDQGFHTY-----------------LLDGDNVRHGLNKDL 508 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++ V V + + G I+L S + L + + I Sbjct: 509 GFTDADRVENIRRVAEVAKLMVDAGTIVLA-----SFISPFRAERQMARELLGAGEFIE- 562 Query: 126 QEVMPDCTIILDLPVDIGLKRVQN 149 I +D P+ + R + Sbjct: 563 --------IFVDTPLSVAESRDRK 578 >gi|229823515|ref|ZP_04449584.1| hypothetical protein GCWU000282_00813 [Catonella morbi ATCC 51271] gi|229786959|gb|EEP23073.1| hypothetical protein GCWU000282_00813 [Catonella morbi ATCC 51271] Length = 230 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 72/239 (30%), Gaps = 62/239 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T L K+Y + + R + + A+A Sbjct: 18 GLPGAGKGTQSERLV-----KDYQIVHI------ATGDIFRAAIQNETPLGLQAKAYTDN 66 Query: 71 FAAARLDHVENVIRPALMEGKI----LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + ++R L + + + D + +S Q + + L+S Sbjct: 67 GNLVPDEVTNAIVRERLAQDDVKAQGFMLDGYPRTSA--QAQALDQNLVELNS------- 117 Query: 127 EVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL--------------------DYFERK 165 P I +D+ ++ R+ R R D+++R+ Sbjct: 118 ---PIHAVIYIDVDPEVLKDRLSGRIICRNCGATYHKLYNPPKVEGVCDNCGASDFYQRE 174 Query: 166 DVMIHEKRRQIFLDIARNQPDR-----------CHIVDSAHSFQSVATNILNIVWELVQ 213 D EK + + + R + VD + V +I I+ + Q Sbjct: 175 D-DKPEKV--AYRINLQMESIRPILDYYEERGLLYRVDGQQAIDKVYEDIRQILSSVAQ 230 >gi|148726390|emb|CAN88185.1| cytidylate kinase [Danio rerio] Length = 220 Score = 42.3 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190 + D ++ + R R + E++ + R I +++ Q + Sbjct: 141 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 198 Query: 191 VDSAHSFQSVATNILNIVWE 210 +D++ S V ++ NI+ + Sbjct: 199 IDASRSVDEVFADVKNILEK 218 >gi|331664599|ref|ZP_08365505.1| hypothetical ATP-binding protein YghR [Escherichia coli TA143] gi|331058530|gb|EGI30511.1| hypothetical ATP-binding protein YghR [Escherichia coli TA143] Length = 252 Score = 42.3 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLVIDIDTAISR 193 >gi|163847944|ref|YP_001635988.1| adenylate kinase [Chloroflexus aurantiacus J-10-fl] gi|222525824|ref|YP_002570295.1| adenylate kinase [Chloroflexus sp. Y-400-fl] gi|163669233|gb|ABY35599.1| Adenylate kinase [Chloroflexus aurantiacus J-10-fl] gi|222449703|gb|ACM53969.1| Adenylate kinase [Chloroflexus sp. Y-400-fl] Length = 222 Score = 42.3 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 48/159 (30%), Gaps = 39/159 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T L + + R L A++ Sbjct: 8 GPPGAGKGTQAKTLADR-----------TGLTHVASGDLFRAALREGTELGMLAKS---- 52 Query: 71 FAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 R + V E + +P G ++ D F + Q + + + D Sbjct: 53 -YMDRGELVPDEVVIRMILERIQQPDCASG--VIFDGFPRT----QEQARALEVALADHN 105 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 I D + L +P D+ L+R+ R + R + Sbjct: 106 ARI-------DAVLFLAVPQDVLLRRIAGRQTCRTCGAI 137 >gi|330798684|ref|XP_003287381.1| hypothetical protein DICPUDRAFT_32350 [Dictyostelium purpureum] gi|325082648|gb|EGC36124.1| hypothetical protein DICPUDRAFT_32350 [Dictyostelium purpureum] Length = 273 Score = 42.3 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 19/148 (12%), Positives = 36/148 (24%), Gaps = 43/148 (29%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I GI +GK+ L + V + E +L++ + Sbjct: 3 LIVLSGIPSSGKSQRAKDLYDHFTQMGKKVVIISEET----------LLINKNEGYKDSL 52 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGERDSSQHLFL 117 E ++ I L + +++ D R+ A Sbjct: 53 TE-----KMTRGSLKAAIERNLNKETVVISDSLNYIKGYRYELFCIARAAGTRL------ 101 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLK 145 I D P D+ + Sbjct: 102 --------------LVIYCDTPRDVSKQ 115 >gi|322830507|gb|EFZ33506.1| adenylate kinase, putative [Trypanosoma cruzi] Length = 260 Score = 42.3 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 74/242 (30%), Gaps = 75/242 (30%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T + V + + R + E G A Sbjct: 52 IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--------D 118 E + H ++ KI++ + + D + +L D Sbjct: 99 ETFI-------HNGEMV-----PNKIVIS-----AVRKRLEQDDVKERGWLLDGFPRSQD 141 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYF 162 + + ++P ++L++P I ++R++NR + + + + Sbjct: 142 QAEALESSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERL 201 Query: 163 ERKDVM-----------IHEK---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++D HEK R+ + + ++ S +V +L +V Sbjct: 202 IQRDDDHRETVEARLRIYHEKLHGLREHYGTLVE-------TINGDQSIHAVTEGVLAVV 254 Query: 209 WE 210 Sbjct: 255 ER 256 >gi|317056473|ref|YP_004104940.1| guanylate kinase [Ruminococcus albus 7] gi|315448742|gb|ADU22306.1| guanylate kinase [Ruminococcus albus 7] Length = 216 Score = 42.3 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 78/225 (34%), Gaps = 45/225 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G GK T + + TREP + H + + ++ A Sbjct: 10 KLIIVSAPSGCGKGTIMEKAFDRDEVFYSVSCTTREPRPGEIDGKSYHFITTEEFEKMIA 69 Query: 65 EAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E + +A + + + L GK ++ + +++ A+Q Sbjct: 70 EDSFLEYAKYNQTYYGTPKKPVEENLAAGKDVILE--IETQGAFQ--------------- 112 Query: 122 EISVQEVMPDC-TIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 V+++ PD T+ + LP + +R+ R + +E I + Q Sbjct: 113 ---VKKIRPDANTLFI-LPPSVAELDRRLHKRATEKEE-----------TIKRRVSQAAG 157 Query: 179 DIARNQPDRCHI----VDSA-HSFQSVATNILNIVWELVQKRVSP 218 +IA+ I +D+A F++V I + V R SP Sbjct: 158 EIAKADKYDYVIMNDDLDAAIDDFKAVIDGIRGVKEPAV--RFSP 200 >gi|194381996|dbj|BAG64367.1| unnamed protein product [Homo sapiens] Length = 188 Score = 42.3 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 14/131 (10%) Query: 93 LLCDRFLDSSYAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRV 147 + DR++ +S Y+ E + + D + Q + D I L + L R+ Sbjct: 58 VYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRI 117 Query: 148 QNRYSLRESA-CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201 R E L+Y E+ + ++H + F D + P +D F+ Sbjct: 118 YLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNF-DYLQEVP--ILTLDVNEDFKDKY 174 Query: 202 TNILNIVWELV 212 +++ V E + Sbjct: 175 ESLVEKVKEFL 185 >gi|62185147|ref|YP_219932.1| adenylate kinase [Chlamydophila abortus S26/3] gi|81312689|sp|Q5L5W0|KAD_CHLAB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|62148214|emb|CAH63972.1| adenylate kinase [Chlamydophila abortus S26/3] Length = 213 Score = 42.3 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 50/158 (31%), Gaps = 36/158 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHV 53 M + +F G G+GK T L L+ + P G AAE Sbjct: 1 MLNKIFYIIMGPPGSGKGTQSQRLAHQLKLPHMSSGELFRSAIDSASPLGIKAAEYINQG 60 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 LL +G EA+ +P G I+ G + Sbjct: 61 LLVPDAIVWGMVQEALN-------------QPECQSGCII------------DGFPRTLD 95 Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQNR 150 L L + +Q D I LD+ + ++R+ +R Sbjct: 96 QAIL--LNDFFMQSYA-DYRVIQLDVSNEEIIRRIHSR 130 >gi|315187138|gb|EFU20895.1| cytidylate kinase [Spirochaeta thermophila DSM 6578] Length = 172 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 58/217 (26%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 + ++ G G G +T ++ L + NY + G P + + S D + Sbjct: 1 MIVAISGKSGCGNSTVSRMVAERLGLRWINYTFRNISQEQGVPFEQILKEAQESPRWDLY 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++ + L EG +L R ++L + Sbjct: 61 ----------------LDERQKNLLQEGTCVLGSR---------------LAIWLAPPEA 89 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ---IFLD 179 + L P+++ +R+Q R FE E+ R+ +L Sbjct: 90 FK---------VYLYAPLEVRARRIQKREGG-------RFEEILEETRERDRRDAGRYLA 133 Query: 180 IARNQPDRC-----HIVDSA-HSFQSVATNILNIVWE 210 + DR ++D+ + + + I+ V + Sbjct: 134 LYGIDIDRYEEVADLVIDTTELTPEEITERIVAGVQK 170 >gi|218961740|ref|YP_001741515.1| Adenylate kinase (ATP-AMP transphosphorylase) [Candidatus Cloacamonas acidaminovorans] gi|167730397|emb|CAO81309.1| Adenylate kinase (ATP-AMP transphosphorylase) [Candidatus Cloacamonas acidaminovorans] Length = 210 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 53/230 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F GI+G+GK T LL ++ ++ G E + L V A+ Sbjct: 5 IVFLGIQGSGKGTQAELLAERTGFQHINI------GDLFREEVHKQTELGKKVQAIIAKG 58 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E + + + V ++ +L + + G + L+ +V+ Sbjct: 59 ELV-----QDELVFEIVNASLTAD---------CAGVVFDGFPRTLAQAE-YLLKNYNVR 103 Query: 127 EVMPDCTIILDLPVDIGLKRVQNR--------------YSLRESACLD--------YFER 164 L+L + + R++ R ++ D + Sbjct: 104 -----RVYYLELNEEEAIARIEARRLCSSCGETYNILSKKPKQEGICDKCGSPLVQRTDD 158 Query: 165 KDVMIHEKRRQIFLDIAR-----NQPDRCHIVDSAHSFQSVATNILNIVW 209 I E+ + + + + + S + + I+N + Sbjct: 159 SGEAIRERVKAFYEQTFALKEYFAEKGLLKEISARKSIEEIQQEIINDLK 208 >gi|149641865|ref|XP_001511374.1| PREDICTED: similar to NADH dehydrogenase, partial [Ornithorhynchus anatinus] Length = 365 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 59/167 (35%), Gaps = 18/167 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-----------LL 55 I+ +G +GK+ L L +++ + +++ Sbjct: 79 ITVDGNLCSGKSKLAKGLAEKLGLRHFPEADVYYLDRSVGDGTIKNLDYGASSSLEVFYD 138 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGER 109 + + + +RL + + L G+ ++ +R + S + + QG Sbjct: 139 NPRSSDGNSYRLQSWLYTSRLLQYADALEHLLSTGQGVVLERSIFSDFVFLEAMFNQGYI 198 Query: 110 DSSQHLFLDSLQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + ++ I++ E + P I +D+PV K++Q + E Sbjct: 199 RKQCVEHYNEVKRITICEYLPPHVAIYIDMPVPEVQKKIQEKGDPHE 245 >gi|290995188|ref|XP_002680197.1| predicted protein [Naegleria gruberi] gi|284093817|gb|EFC47453.1| predicted protein [Naegleria gruberi] Length = 202 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 63/208 (30%), Gaps = 38/208 (18%) Query: 18 TTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLD 77 TT L + VH + A+ + + + + Sbjct: 1 TTLAKALAEKI---GVGVHYEPVIDNSYLAD------FYSDMKTYSFRLQVYLLNKRFEQ 51 Query: 78 HVENVIRPALMEGKILLCDR--FLDSSYA-------YQGERDSSQHLFL-DSLQEISVQE 127 H + + G + DR + D+ +A +RD ++ L ++ + Sbjct: 52 HQKIIWG---SNGG--VQDRTIYEDAIFAKVLMDTGMMEKRDYETYVSLFRNMSKFMKHN 106 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 M I LD+ + ++R++ R ES + +K + + Sbjct: 107 TM---IIHLDVSPETSMERIKMRGRECESGI-------TLEYLQKLHSGYEEWLTKISKI 156 Query: 188 CHIVDSA----HSFQSVATNILNIVWEL 211 ++ S ++V ++ ++ Sbjct: 157 IPVIKVNWSQFRSLENVLEEVMKAYNQI 184 >gi|291383983|ref|XP_002708584.1| PREDICTED: dynein, cytoplasmic 2, heavy chain 1 isoform 1 [Oryctolagus cuniculus] Length = 4313 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 26/119 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G GAGK+T +L+ L + V ++ P A +L G + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALSKIGKVV---KQYTMNPKAMPKHQLL---GHIDMDTRE 2028 Query: 67 EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ +AR V+R ++CD +++SL + Sbjct: 2029 WSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|146090934|ref|XP_001466398.1| dynein heavy chain [Leishmania infantum JPCM5] gi|134070760|emb|CAM69117.1| putative dynein heavy chain [Leishmania infantum JPCM5] Length = 4455 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 26/119 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G+GK+T +++L++ LQ +V + P A R +L G + Sbjct: 2122 VVLVGPSGSGKSTLLNILRKALQTMQIEVPMHVM---NPKAMTRRRLL---GYMDADTRE 2175 Query: 67 EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ AAAR +V++ +LCD +++SL + Sbjct: 2176 WYDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2216 >gi|78044025|ref|YP_360320.1| guanylate kinase [Carboxydothermus hydrogenoformans Z-2901] gi|119371199|sp|Q3AC14|KGUA_CARHZ RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|77996140|gb|ABB15039.1| guanylate kinase [Carboxydothermus hydrogenoformans Z-2901] Length = 204 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 28/169 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G+ + G GAGK T +++ Y + TRE + + Sbjct: 1 MHKGMLVVVSGPSGAGKGTICQEIRKRNPNLFYSISATTREKRVGEIDGVHYYFIDRQQF 60 Query: 60 DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 ++ A E + A + + + AL G+ ++ Sbjct: 61 EKMIANDE-FLEWADVYGNYYGTPKKPVFEALARGQDVIL---------------EIDIK 104 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYF 162 +++ + + LP I + +R++ R + +E + Sbjct: 105 GARQVKKTYPEG-----VFVFILPPSISILEERLRKRGTDKEEIIVKRM 148 >gi|73980035|ref|XP_532914.2| PREDICTED: similar to XPA binding protein 1 isoform 1 [Canis familiaris] Length = 288 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|73980010|ref|XP_850503.1| PREDICTED: similar to XPA binding protein 1 isoform 1 [Canis familiaris] Length = 374 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|73980018|ref|XP_861696.1| PREDICTED: similar to XPA binding protein 1 isoform 6 [Canis familiaris] Length = 288 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|73980027|ref|XP_850597.1| PREDICTED: similar to XPA binding protein 1 isoform 2 [Canis familiaris] Length = 374 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHSRGSPPYVVNLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|18977417|ref|NP_578774.1| adenylate kinase [Pyrococcus furiosus DSM 3638] gi|22653803|sp|Q8U207|KAD_PYRFU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|18893108|gb|AAL81169.1| adenylate kinase (adk) [Pyrococcus furiosus DSM 3638] Length = 220 Score = 42.3 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 71/226 (31%), Gaps = 50/226 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK+T + + + R + G E +A + Sbjct: 7 GPPGSGKSTQARRIVER-----------YGLTYISSGDLIRKEI--AEGTPLGREMQAYL 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 AR D + + I +++ R + + G + + + + Sbjct: 54 ---ARGDLIPDTIV-----NTLIISKLRRVRKDFIMDGYPRT-PEQVIALENYLYDHGIK 104 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------------RKDV--M 168 D I + + ++ ++RV R + + + E R+D Sbjct: 105 IDVAIDIYVSLEESIRRVSGRRICPKCGAVYHVEFNPPKIPGRCDVCGAELVQREDDRPE 164 Query: 169 IHEKRRQIFLDIAR-----NQPDRCHI-VDSAHSFQSVATNILNIV 208 + EKR +I++ Q R ++ ++ + V I ++ Sbjct: 165 VVEKRYRIYMKNMEPIIKFYQKQRIYVKINGHGNIDEVWERIRPLL 210 >gi|282882033|ref|ZP_06290674.1| guanylate kinase [Peptoniphilus lacrimalis 315-B] gi|281298063|gb|EFA90518.1| guanylate kinase [Peptoniphilus lacrimalis 315-B] Length = 205 Score = 42.3 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 71/231 (30%), Gaps = 43/231 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G + G G+GK T + + + + TR P + Sbjct: 1 MSGGFLLVLSGPSGSGKGTVSQAIMKENKEIIFSTSVTTRTPRPGEVNGENYFFVSKTKF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ + E + A ++ + + + +G+I+L + +D A Q ++ + Sbjct: 61 EQMVEKDELLEHAFVHTNYYGTPKQFVFDQIEKGEIVLLE--IDVQGALQIKKKYKEA-- 116 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 I +P + R+ R + E F E Sbjct: 117 ----------------VFIFLIPPTMEELRNRLVKRDTESEEEINTRF---KNAFRE--- 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 LD +++ V+ +++ + ++ + KDI Sbjct: 155 ---LDFVGEYD--YFVIN-----DKVSQAVID-IENIIAAEKLRVKRHKDI 194 >gi|291383985|ref|XP_002708585.1| PREDICTED: dynein, cytoplasmic 2, heavy chain 1 isoform 2 [Oryctolagus cuniculus] Length = 4306 Score = 42.3 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 26/119 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G GAGK+T +L+ L + V ++ P A +L G + Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALSKIGKVV---KQYTMNPKAMPKHQLL---GHIDMDTRE 2028 Query: 67 EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ +AR V+R ++CD +++SL + Sbjct: 2029 WSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|209915597|ref|NP_001129612.1| UMP-CMP kinase isoform b [Homo sapiens] Length = 179 Score = 42.3 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 12/81 (14%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------NQPD 186 + D +I ++R R + + + + EKR Q +L + + Sbjct: 100 VLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKPIIDLYEEMG 153 Query: 187 RCHIVDSAHSFQSVATNILNI 207 + +D++ S V ++ I Sbjct: 154 KVKKIDASKSVDEVFDEVVQI 174 >gi|320537739|ref|ZP_08037664.1| ribosomal protein S1 [Treponema phagedenis F0421] gi|320145418|gb|EFW37109.1| ribosomal protein S1 [Treponema phagedenis F0421] Length = 803 Score = 42.3 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 89/248 (35%), Gaps = 64/248 (25%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + + ++ +G G+GK+T LL L H+T G+ + VL S G Sbjct: 1 MKN-IIVAIDGPAGSGKSTIAKLLAEEL-------HLTFMNTGSFYRALSLAVLRSLGGS 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 G+ AA D E E L R+ + S Y G + L D++ Sbjct: 53 ADGS-------GAAPPDLSEEERWTEFAEHTDL---RYSNGS-VYLGNENVEAFLRSDAV 101 Query: 121 QEI--SVQEVMP-----------------------DCT----------IILDLPVDIGLK 145 ++I ++ ++P D T LD V+ K Sbjct: 102 EKIVAALSAIIPIRHCINKKIRDAARSLDIICEGRDMTTVVFPDADFKFYLDASVEARAK 161 Query: 146 RVQNRYSLR---ESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVA 201 R N+ + + E + ER + ++K + L IA++ +D++ + + V Sbjct: 162 RRFNQGTSKLSLEEITANIEERDQIDKNKK--EGSLKIAKDAAY----LDTSRLTIKEVC 215 Query: 202 TNILNIVW 209 I N + Sbjct: 216 EIIKNKIH 223 >gi|323966515|gb|EGB61948.1| ATP-binding protein YghR [Escherichia coli M863] gi|327251768|gb|EGE63454.1| hypothetical protein ECSTEC7V_3620 [Escherichia coli STEC_7v] Length = 252 Score = 42.3 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGIERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|322500244|emb|CBZ35322.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 4455 Score = 42.3 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 26/119 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G+GK+T +++L++ LQ +V + P A R +L G + Sbjct: 2122 VVLVGPSGSGKSTLLNILRKALQTMQIEVPMHVM---NPKAMTRRRLL---GYMDADTRE 2175 Query: 67 EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ AAAR +V++ +LCD +++SL + Sbjct: 2176 WYDGVLTAAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2216 >gi|163753063|ref|ZP_02160187.1| Deoxynucleoside kinase subfamily, putative [Kordia algicida OT-1] gi|161326795|gb|EDP98120.1| Deoxynucleoside kinase subfamily, putative [Kordia algicida OT-1] Length = 204 Score = 42.3 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 30/188 (15%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT LL + H EP + + L + E + Sbjct: 10 GAGKTTLTKLLAK---------HYKWEP---HFEDVVDNPYLDDFYTQM--ERWSFNLQI 55 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEISVQ 126 L+ + GK ++ DR + D+ + G + + SL E+ + Sbjct: 56 YFLNSRFRQVLQIRESGKKIIQDRTIYEDAHIFAPNLHAMGLMTNRDYENYQSLFELMQK 115 Query: 127 EV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IARNQ 184 V PD I L + + ++ R E++ + + + + I++ Sbjct: 116 LVDAPDLLIYLRADISTLVAQIHKRGRDYENSI-------SIDYLSRLNERYEAWISKYD 168 Query: 185 PDRCHIVD 192 + ++D Sbjct: 169 QGKLLVID 176 >gi|126465250|ref|YP_001040359.1| adenylylsulfate kinase [Staphylothermus marinus F1] gi|126014073|gb|ABN69451.1| adenylylsulfate kinase [Staphylothermus marinus F1] Length = 181 Score = 42.3 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 16/96 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59 +N G + F G+ G+GKTT + + L+ K Y V V + AR + L G Sbjct: 4 LNKGFVVWFTGLPGSGKTTLAKNVAKILRDKGYRVEVI-------DGDWARKTISLGAGY 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 L V V R G I+LC Sbjct: 57 TREERRI--------HLHRVAWVARLLARNGVIVLC 84 >gi|29436460|gb|AAH49446.1| Cytidylate kinase [Danio rerio] Length = 219 Score = 42.3 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190 + D ++ + R R + E++ + R I +++ Q + Sbjct: 140 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 197 Query: 191 VDSAHSFQSVATNILNIVWE 210 +D++ S V ++ NI+ + Sbjct: 198 IDASRSVDEVFADVKNILEK 217 >gi|75907697|ref|YP_321993.1| guanylate kinase [Anabaena variabilis ATCC 29413] gi|119371171|sp|Q3MD38|KGUA_ANAVT RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|75701422|gb|ABA21098.1| guanylate kinase [Anabaena variabilis ATCC 29413] Length = 199 Score = 41.9 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 54/173 (31%), Gaps = 22/173 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 +SG I G G GK T + L + Y V TR P + + + + Sbjct: 18 SSGKLIVLTGPSGVGKGTLMRSLLQRHPELYYSVSATTRAPRPGEVNGESYYFISRNKFE 77 Query: 61 EFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E A+ E + FA + + GK+++ + + F Sbjct: 78 ELLAQGEFLESAEFAGNYYGTPREAVLNQIQSGKLVVLE-------IELAGARQIRASFP 130 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++L IL + KR++ R E A +R I Sbjct: 131 EALS-----------IFILPPSFEELEKRIRGRGQDSEEAIARRLQRATEEIQ 172 >gi|307103587|gb|EFN51846.1| hypothetical protein CHLNCDRAFT_59789 [Chlorella variabilis] Length = 282 Score = 41.9 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%) Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFER 164 + + I + + PD +++++P ++ + RV R S + + + Sbjct: 165 EQAEAIEKEGIRPDIFLLINVPDELLIDRVVGRRSDPATGEIYHLTFKPPPPEIVSRLVQ 224 Query: 165 KDVMIHEKRRQIFLDIARN-------QPDRCHIVDSAHSFQSVATNILNIV 208 + EK R N + +D S V +I+ + Sbjct: 225 RSDDTEEKARNRLRTYHANVDAVVGYYKNEVVEIDGTASMDMVFEDIVAAI 275 >gi|303276619|ref|XP_003057603.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460260|gb|EEH57554.1| predicted protein [Micromonas pusilla CCMP1545] Length = 265 Score = 41.9 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 62/235 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G +GK T L+ A + R + A+A Sbjct: 63 VVIAGAPASGKGTQCELIVEKF-----------GLVHISAGDLLRAAVAEGTPAGLEAKA 111 Query: 67 EAIVFAAARLDHVEN-----VIRPAL-----MEGKILLCDRFLDSSYAYQGERDSSQHLF 116 R D V + +++ AL E L D + S A Q + Sbjct: 112 -----YMDRGDLVPDEVVVTMVKDALDCEEAEENGW-LLDGYPRS--ASQADA------- 156 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFE 163 I + + PD ++L++P ++ ++RV R E+ + D Sbjct: 157 ------IEKEGITPDVFLLLNVPDEMLIERVVGRRLDPETGAIYHVKFFPPPEDVVDRLT 210 Query: 164 RKDVMIHEKRRQIF-------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + EK + + + +D + V I +I+ E+ Sbjct: 211 IRSDDTEEKAKNRLAVHHSNVEAVVGRYEGKIREIDGDRAKTEVFAEIASILDEM 265 >gi|145224339|ref|YP_001135017.1| shikimate kinase [Mycobacterium gilvum PYR-GCK] gi|315444671|ref|YP_004077550.1| shikimate kinase [Mycobacterium sp. Spyr1] gi|145216825|gb|ABP46229.1| shikimate kinase [Mycobacterium gilvum PYR-GCK] gi|315262974|gb|ADT99715.1| shikimate kinase [Mycobacterium sp. Spyr1] Length = 220 Score = 41.9 bits (98), Expect = 0.056, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 51/163 (31%), Gaps = 34/163 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T L + L + T + + G EF Sbjct: 9 GLPGSGKSTIGRRLAKSL---GVPLLDTDNAIEETTGRTIADIFATDGESEF-------- 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R++ E VIR AL +L G + ++L + Sbjct: 58 ---RRIE--EQVIRDALATHDGVLS----------LGGGAVTTEGVREALAGHT------ 96 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 I L++ G++R A D E+ ++ E+ Sbjct: 97 --VIYLEISAAEGVRRTGGSTVRPLLAGPDRGEKFKALMAERV 137 >gi|261889376|gb|ACY06272.1| deoxyadenosine kinase [Streptomyces flaveolus] Length = 219 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 64/221 (28%), Gaps = 40/221 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKT+ L+ + L P + + G +E A+ + Sbjct: 9 GIGKTSVAELIAKELGSM----VFYESVEDNPILP----LFYTAGPEEIAAKRYPFLLQL 60 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM---- 129 L I+ A + +L DR + + + + SL+ + ++ Sbjct: 61 YFLQTRFAAIKEAYKQDDNVL-DRSIYEDWYFAKVNHDLGR--ISSLEMQVYEGLLAEMM 117 Query: 130 -----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD + L + L+R+ R E ++ V + + Sbjct: 118 REIDGLPYRKAPDLMVYLRADFETVLRRIGLRGRDFEQ------DQSLVEYYRTLWAGYD 171 Query: 179 DIARNQ--PDRCHIVDSAH-----SFQSVATNILNIVWELV 212 D ++D S A ++ V + + Sbjct: 172 DWVHEHYSASDVLVIDMNRTDVVNSPDD-AKRVVREVADAL 211 >gi|297570607|ref|YP_003691951.1| cytidylate kinase [Desulfurivibrio alkaliphilus AHT2] gi|296926522|gb|ADH87332.1| cytidylate kinase [Desulfurivibrio alkaliphilus AHT2] Length = 231 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 69/225 (30%), Gaps = 46/225 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE- 65 ++ +G GAGK+T L L + R V L AE Sbjct: 9 VTIDGPSGAGKSTISRRLAARL-----------DYTYLDTGAMYRAVGLHVRRRAVDAED 57 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ------HLFLDS 119 AEA+ A L+ + + PA + ++L + S E Sbjct: 58 AEAL---EACLEELAIELLPAGDDDVLVLLNGEDVSGIVRSAEMGLVASQISAYPQVRRK 114 Query: 120 LQEI-----SVQEVM-----------PDCT--IILDLPVDIGLKRV--QNRYSLRESACL 159 L E+ + ++ PD LD + +R Q R Sbjct: 115 LTELQRRLAATGGLVAEGRDMGTVVFPDALHKFYLDAAPEERARRRCEQLRQRGENPEPK 174 Query: 160 DYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVDSAH-SFQSVAT 202 + E+ H+ +A +P D IVDS+ ++V Sbjct: 175 EILEQIIKRDHD---DASRALAPLRPADDAVIVDSSQMPLEAVVE 216 >gi|18978103|ref|NP_579460.1| signal recognition particle protein Srp54 [Pyrococcus furiosus DSM 3638] gi|23822176|sp|Q8U070|SRP54_PYRFU RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|211939182|pdb|3DM5|A Chain A, Structures Of Srp54 And Srp19, The Two Proteins Assembling The Ribonucleic Core Of The Signal Recognition Particle From The Archaeon Pyrococcus Furiosus. gi|211939183|pdb|3DM5|B Chain B, Structures Of Srp54 And Srp19, The Two Proteins Assembling The Ribonucleic Core Of The Signal Recognition Particle From The Archaeon Pyrococcus Furiosus. gi|18893898|gb|AAL81855.1| signal recognition particle protein srp54 [Pyrococcus furiosus DSM 3638] Length = 443 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT ++ L R+ Q++ Y V V P A R +L ++ FG E Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + + +G I++ D R ++ +++I Sbjct: 165 ---KDAIKLAKEGVDYFKSKGVDIIIVD---------TAGRHKEDKALIEEMKQI 207 >gi|331674539|ref|ZP_08375299.1| hypothetical ATP-binding protein YghR [Escherichia coli TA280] gi|331068633|gb|EGI40028.1| hypothetical ATP-binding protein YghR [Escherichia coli TA280] Length = 252 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAVVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|257877202|ref|ZP_05656855.1| deoxynucleoside kinase [Enterococcus casseliflavus EC20] gi|257811368|gb|EEV40188.1| deoxynucleoside kinase [Enterococcus casseliflavus EC20] Length = 220 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 70/236 (29%), Gaps = 56/236 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ +L+ ++A + V Sbjct: 10 IVLAGTIGAGKSSLTALIANHF-----------------GSQAFYESIDDNEVLPLFYAD 52 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS--------- 112 A + L+ I+ A+ + +L DR + DS + Sbjct: 53 PNKYAFLLQIYFLNKRFESIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATDTEVKVY 111 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + L+E+ + + PD + + + + L+R++ R E + + Sbjct: 112 DELLANMLEELPYAAHKKHPDLLVHIRVSFETMLERIEKRGR----------EYEQLTFD 161 Query: 171 EKRRQIFLDIARNQPDRC--------HIVDSAH----SFQSVATNILNIVWELVQK 214 + ++ + +D A +L +V + ++ Sbjct: 162 PSLYDYYKELNKRYDQWYEEYNESPKIQIDGDQFNFVEDSQAAQAVLTMVEDALKD 217 >gi|225024312|ref|ZP_03713504.1| hypothetical protein EIKCOROL_01187 [Eikenella corrodens ATCC 23834] gi|224942897|gb|EEG24106.1| hypothetical protein EIKCOROL_01187 [Eikenella corrodens ATCC 23834] Length = 219 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 32/182 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +I EG G+GK+ L ++ +P P E L+ A Sbjct: 6 RYIVVEGPIGSGKSPLSRKLAEHF----GCTLISEQPEKNPFLE---QFYLNAANHGLAA 58 Query: 65 -------EAEAIVFAAARLD------HVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 E + AA + ++ V+ L+E + F+ + Sbjct: 59 ELYFLLRRTETLNLIAAADEIGNANHSMQRVVSDFLLEKDQI----FVPTIL------RE 108 Query: 112 SQHLFLDSLQE-ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYFERKDVMI 169 + L++ I + +PD I L ++++R + Y ++ Sbjct: 109 DEQALYWQLKQKIMPEIPVPDLVIYLQTSAGAAEAQLRSRGDNHINLFPPGYLQQVHEEY 168 Query: 170 HE 171 H Sbjct: 169 HR 170 >gi|148726391|emb|CAN88186.1| cytidylate kinase [Danio rerio] Length = 225 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190 + D ++ + R R + E++ + R I +++ Q + Sbjct: 146 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 203 Query: 191 VDSAHSFQSVATNILNIVWE 210 +D++ S V ++ NI+ + Sbjct: 204 IDASRSVDEVFADVKNILEK 223 >gi|160898632|ref|YP_001564214.1| adenylyl-sulfate kinase [Delftia acidovorans SPH-1] gi|160364216|gb|ABX35829.1| Adenylyl-sulfate kinase [Delftia acidovorans SPH-1] Length = 228 Score = 41.9 bits (98), Expect = 0.057, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 41/160 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L+ L R +L + Sbjct: 39 GLSGSGKSTIANALQAHLHAAGR-----------------RTYVLDGDNIRSRLNRDLGF 81 Query: 71 FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R + V V R + G I++ A+ S + + Sbjct: 82 SEEDRAENIRRVSEVARLFVDAGTIVIA--------AFISPFRSERDTARAL---FDKGD 130 Query: 128 VMPDCTIILDLPVDIGLK-------RVQNRYSLRESACLD 160 + +D+P+ + + R R LR+ +D Sbjct: 131 F---LEVFVDVPLSVAERRDPKGLYRKARRGELRQFTGID 167 >gi|301755924|ref|XP_002913850.1| PREDICTED: GPN-loop GTPase 1-like [Ailuropoda melanoleuca] Length = 421 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 73 GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 132 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 133 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 169 >gi|296395267|ref|YP_003660151.1| adenylate kinase [Segniliparus rotundus DSM 44985] gi|296182414|gb|ADG99320.1| adenylate kinase [Segniliparus rotundus DSM 44985] Length = 182 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 68/205 (33%), Gaps = 45/205 (21%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVDEFGAEAE 67 GAGK T +LL + L T + TP + A+ L G + Sbjct: 11 GAGKGTQSALLSKAL---GVPHVSTGDLFRANIGENTPLGQEAKK-YLDAGNLVPSSVTN 66 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A RL +P +G + D + R Q L ++ ++ Sbjct: 67 A--MVKDRLA------QPDAKDGF--VLDGY---------PRTLDQAEALTAI--LAELG 105 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK----RRQIFLDIARN 183 D + ++P ++ ++R++ R ++ D + + IH K Q + + Sbjct: 106 QQLDTVLSFEIPEEVVVERMRARGRQDDT---DEIIKARLEIHRKETEPLLQYYESL--- 159 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 +++ + V L + Sbjct: 160 ----VVAINAVGTVDEVQARALKAL 180 >gi|281344939|gb|EFB20523.1| hypothetical protein PANDA_001638 [Ailuropoda melanoleuca] Length = 382 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLID 122 >gi|266619842|ref|ZP_06112777.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288868551|gb|EFD00850.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 319 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 31/130 (23%), Positives = 48/130 (36%), Gaps = 6/130 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I+ G G+GKTT L L K +V + TP ++SC + Sbjct: 9 MVQNKIIAVMGSPGSGKTTASIKLAAELAEKKKNVILVFCDPFTPVIPF----VVSCPEE 64 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + +++ I P G I LL R DS AY FL Sbjct: 65 QVSVGTLLTTPSLTQKMILDSCI-PIKENGYISLLGYRLGDSLMAYPQITRDRAVDFLVC 123 Query: 120 LQEISVQEVM 129 L+ ++ +M Sbjct: 124 LRYLADFIIM 133 >gi|218701759|ref|YP_002409388.1| hypothetical protein ECIAI39_3479 [Escherichia coli IAI39] gi|301019934|ref|ZP_07184069.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|301325672|ref|ZP_07219133.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|331648775|ref|ZP_08349863.1| hypothetical ATP-binding protein YghR [Escherichia coli M605] gi|218371745|emb|CAR19596.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli IAI39] gi|299882032|gb|EFI90243.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|300847527|gb|EFK75287.1| conserved hypothetical protein [Escherichia coli MS 78-1] gi|330909043|gb|EGH37557.1| conserved protein YghR, with nucleoside triphosphate hydrolase domain [Escherichia coli AA86] gi|331042522|gb|EGI14664.1| hypothetical ATP-binding protein YghR [Escherichia coli M605] Length = 252 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|253988710|ref|YP_003040066.1| deoxynucleoside kinase family protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637965|emb|CAR66593.1| deoxynucleoside kinase family protein [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780160|emb|CAQ83321.1| deoxynucleoside kinase family protein [Photorhabdus asymbiotica] Length = 254 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 74/221 (33%), Gaps = 26/221 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +I G G GK+T + + L + E +A H L + Sbjct: 25 RKPKYICLTGNSGVGKSTLLKSIGSALYNLDNYTIAIDE-------KAIHHPFLQSLFSD 77 Query: 62 FGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDR-----FLDSSYAYQ-GERDSSQ 113 I F R I+ + G L+ +R ++ + Y+ G + Sbjct: 78 TRRYGYLIQINFMIQRALL----IKAWIDAGYNLVMERSHLEDYIFIEFMYEKGYISNDD 133 Query: 114 HLFLDSLQ-EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI--- 169 H + EI PD + +D PV+ L + R + ++ + + I Sbjct: 134 HDAYLVIWDEIKNHLPEPDVIVFMDFPVEFSLDNL-ARDEILGIRPREFPDEETKKIWIS 192 Query: 170 --HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ + F + + ++ + + + + + ++N + Sbjct: 193 GWFKQYNEFFAKLTEKEREKVIVFEPSLTCTEITDTVINKL 233 >gi|21668336|emb|CAC84481.1| thymidine kinase [Heliothis virescens ascovirus 3c] Length = 217 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 62/219 (28%), Gaps = 33/219 (15%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++S EG G+GK++ + + + + EP LL Sbjct: 12 YVSVEGNIGSGKSSVMRSVAKHFDD---CILFCEEPVNDWG-------LL--EYMYRDPT 59 Query: 66 AEAIVFAAARLDHVENVIRPALME-----GKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A F L + AL E +I++ +R S+Y + Sbjct: 60 KYAFAFEVQVLTSKYHKWINALDECRRTQKRIVVMERSPLSAYKVFTRMMRERGTISSQQ 119 Query: 121 QEISVQ---EVMPDC-TII----LDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 I Q E P TI +D R R E E + Sbjct: 120 YHIYTQMFAEFQPQLKTIDHIVHIDTRASTCQVRAGERNRKAE-------EALSLEYLLD 172 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + + + +D S + VA + + L Sbjct: 173 V-ESYTNNYVRDHSSVYTIDGDRSREHVAGELTAFLSSL 210 >gi|327400978|ref|YP_004341817.1| adenylate kinase [Archaeoglobus veneficus SNP6] gi|327316486|gb|AEA47102.1| Adenylate kinase [Archaeoglobus veneficus SNP6] Length = 217 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 58/234 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T L+ + T + R + E G +A+ + Sbjct: 7 GPPGSGKGTQAKLIVE---KYGIPQIST--------GDMLREAV--AKGTELGKKAKEYM 53 Query: 71 FAAARLDHVEN-----VIRPALMEGKILLCDR-FLDSSYAYQGERDSSQHLFLDSLQEIS 124 + V + +++ L + CD+ F+ + + + L+ L Sbjct: 54 ---DKGQLVPDEVVIGIVKERLKQPD---CDKGFILDGFPRTIAQAEALDKMLEEL---- 103 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-----------ERKDVMIHEK- 172 D I + +P + +KR+ NR S R + + ++ ++++ Sbjct: 104 --GKKIDAVINIQVPEEEVVKRIVNRRSCRNCGAVYHLIYKPPKEEGKCDKCGGELYQRD 161 Query: 173 ------RRQIFLDIARN-QP--DRCHI------VDSAHSFQSVATNILNIVWEL 211 R + +P D +D S V +I I+ ++ Sbjct: 162 DDKEDTVRARYQVYREQTEPLIDYYQKKGLLYNIDGTKSIDDVFKDIEAILEKI 215 >gi|313151219|ref|NP_998274.2| UMP-CMP kinase [Danio rerio] gi|148726392|emb|CAN88187.1| cytidylate kinase [Danio rerio] Length = 219 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 12/80 (15%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHI 190 + D ++ + R R + E++ + R I +++ Q + Sbjct: 140 VLFFDCSNEVCIDRCLERGKSSGRTDDNRESLEKRIQTYLQSTRPI-IELYEKQ-GKVQR 197 Query: 191 VDSAHSFQSVATNILNIVWE 210 +D++ S V ++ NI+ + Sbjct: 198 IDASRSVDEVFADVKNILEK 217 >gi|42768711|gb|AAS45572.1| predicted kinase [Aeromonas hydrophila] Length = 224 Score = 41.9 bits (98), Expect = 0.058, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 19/92 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I F G+ G+GK+T L R L + +A R +E G Sbjct: 57 MLIIFSGLPGSGKSTIARALARRLGAVYLRI--------DTIEQAIRAA--EQADNEMGP 106 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + AR L G I++ D Sbjct: 107 AGYFVAYGLAR---------ENLALGSIVITD 129 >gi|315586699|gb|ADU41080.1| adenylate kinase [Helicobacter pylori 35A] Length = 191 Score = 41.9 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTDRGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V++ + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189 >gi|294661488|ref|YP_003579941.1| PseT 3' phosphatase and 5' polynucleotide kinase [Klebsiella phage KP15] gi|292660649|gb|ADE34897.1| PseT 3' phosphatase and 5' polynucleotide kinase [Klebsiella phage KP15] Length = 294 Score = 41.9 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 80/209 (38%), Gaps = 40/209 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN LF++ G+ G+GKTT + V ++R+ + A + G Sbjct: 1 MN--LFMTI-GVPGSGKTT---WAHEKARELGNTVTISRDDLRSSLYNAGKGA---GGYK 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-S 119 A+ E A DHV + L +GK ++ + ++ ++S ++ + + + Sbjct: 52 YTKAKEE---MIAEMQDHV---VISTLKDGKNVI----IHNT----HLKESDKNHWREIA 97 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 L+ + + D+ + L+R + R +L S + F + + K R F Sbjct: 98 LEHKADFHIE-----YFDVSIVELLRRNHKRGRDALPVSRVWEMFNQ-----YRKIR-GF 146 Query: 178 ---LDIARNQPDRCHIVDSAHSFQSVATN 203 ++I +C I D + V Sbjct: 147 VPAMEIVNTHNQKCVIFDVDGTLTKVGQR 175 >gi|157370642|ref|YP_001478631.1| ABC transporter-like protein [Serratia proteamaculans 568] gi|157322406|gb|ABV41503.1| ABC transporter-related protein [Serratia proteamaculans 568] Length = 584 Score = 41.9 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G FI+ G G+GK+T LL L+ ++ D+ + Sbjct: 367 KGHFITLTGSSGSGKSTLAKLLASELKPESGDILL 401 >gi|71895153|ref|NP_001026418.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Gallus gallus] gi|53135033|emb|CAG32388.1| hypothetical protein RCJMB04_24e8 [Gallus gallus] Length = 361 Score = 41.9 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 8/105 (7%) Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QGERDSS 112 D +A +F R+ + + L G+ ++ +R S + + QG Sbjct: 130 PDGHSYRLQAWLF-GNRILQYSDALEHLLTTGQGVVLERSPYSDFVFLDAMFKQGYIHKR 188 Query: 113 QHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 ++ IS+ + + P I LD+PV KR+Q + E Sbjct: 189 CVDHYKEIKGISICEFLPPHLVIYLDVPVPDVQKRLQEKGEPYEK 233 >gi|300813264|ref|ZP_07093623.1| guanylate kinase [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512625|gb|EFK39766.1| guanylate kinase [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 205 Score = 41.9 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 31/231 (13%), Positives = 70/231 (30%), Gaps = 43/231 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G + G G+GK T + + + + TR P + Sbjct: 1 MSGGFLLVLSGPSGSGKGTVSQAIMKENKEIVFSTSVTTRTPRPGEVNGENYFFVSKTKF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ + E + A ++ + + + G+I+L + +D A Q ++ + Sbjct: 61 EQMVEKDELLEHAFVHTNYYGTPKQFVFDQIENGEIVLLE--IDVQGALQIKKKYKEA-- 116 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 I +P + R+ R + E F E Sbjct: 117 ----------------VFIFLIPPTMEELRNRLVKRDTESEEEINTRF---KNAFRE--- 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 LD +++ V+ +++ + ++ + KDI Sbjct: 155 ---LDFVGEYD--YFVIN-----DKVSQAVID-IENIIAAEKLRVKRHKDI 194 >gi|2462109|emb|CAA72104.1| stage V sporulation protein K [Bacillus cereus ATCC 10987] Length = 598 Score = 41.9 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 34/138 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI F G G GKTT L+ ++L+ Y E R L++ V Sbjct: 324 MN---FI-FTGNPGTGKTTIARLVAKYLKALGY-------LSSGHLVEVDRARLVAQYVG 372 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + G + +A++ +A +G +L D AY R +++ Sbjct: 373 QTGPKTQAVIDSA---------------KGGVLFID------EAYSLARGGENDFGKEAI 411 Query: 121 QEISVQ--EVMPDCTIIL 136 + ++ D +IL Sbjct: 412 DTLVKGMEDLREDLVVIL 429 >gi|20095048|ref|NP_614895.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19] gi|23822175|sp|Q8TUY9|SRP54_METKA RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|19888324|gb|AAM02825.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19] Length = 447 Score = 41.9 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 18/136 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G+ G GKTT + L R+LQRK Y V + +P A E R + + E Sbjct: 108 GLYGMGKTTTAAKLARYLQRKGYRVGLVGADPYRPAAGEQLRQL---AEEVDVPVHVED- 163 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 ++ + E +++ D RD +D L+E++ + + Sbjct: 164 --VDDAVEMAVKGVEALKDECDVVIVD---------TAGRDRLSEDLIDELREMA-ERIE 211 Query: 130 PDCTIILDLPVDIGLK 145 P ++L L +G K Sbjct: 212 PH-EVLLVLDATVGQK 226 >gi|269794616|ref|YP_003314071.1| hypothetical protein Sked_12960 [Sanguibacter keddieii DSM 10542] gi|269096801|gb|ACZ21237.1| hypothetical protein Sked_12960 [Sanguibacter keddieii DSM 10542] Length = 167 Score = 41.9 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 59/199 (29%), Gaps = 46/199 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG+ G GKT + LQR+ + G A V VD Sbjct: 8 VEGVSGTGKT----AVCDELQRRGFHAVH----GDRELAYRGDPVTGDPTVDGGHEHH-- 57 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + A + + RP Y + F+ L Sbjct: 58 LWDVDAVRALIADQTRP-----------------VTYLCGGSRNFAQFVADL-------- 92 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 D +LD+ V+ ++R+ R + ER+ V+ R+ + P Sbjct: 93 --DAVFVLDVDVETLVQRLDQRPMDEWGHRPE--ERQLVLRLHATRE-------DVPRDG 141 Query: 189 HIVDSAHSFQSVATNILNI 207 ++D+ V IL + Sbjct: 142 IVIDATGPLADVVDTILRL 160 >gi|297526828|ref|YP_003668852.1| hypothetical protein Shell_0841 [Staphylothermus hellenicus DSM 12710] gi|297255744|gb|ADI31953.1| hypothetical protein Shell_0841 [Staphylothermus hellenicus DSM 12710] Length = 210 Score = 41.9 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 GL I G +G+GKT+ L ++L+ + ++ + G A +L Sbjct: 2 GLLICLFGADGSGKTSIARYLAKYLRSQGWNTSIAWLRGSHTLASILARLL 52 >gi|224009265|ref|XP_002293591.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970991|gb|EED89327.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 285 Score = 41.9 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 21/100 (21%) Query: 134 IILDLPVDIGLKRVQNRYSLRESAC--------------LDYFERKDVMIHEKR--R-QI 176 I L++P ++ ++RV R + E+ L E++ EK R + Sbjct: 185 IFLNVPDEVLVERVVGRRTDPETGKIYHMTFSPPEDEEILARLEQRSDDTEEKVVVRLEQ 244 Query: 177 FLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWELV 212 F VD + V+ I+ + E++ Sbjct: 245 FHANVEAVKGSYTDIAVEVDGTQKPEEVSGVIMQAIDEVL 284 >gi|328717561|ref|XP_001947826.2| PREDICTED: hypothetical protein LOC100162187 [Acyrthosiphon pisum] Length = 505 Score = 41.9 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 2/121 (1%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT S L F + + V+ E + + LS D+ Sbjct: 11 IVLTGGPCGGKTTGQSRLCTFFENLGWKVYRVPETANVLLSGGIKFSELS--DDQVHTFQ 68 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E ++ +L+ + + + +++CDR + AY ++ + + L + ++ Sbjct: 69 ENLLRCMLQLEDTYFELGKSCDQNCLIICDRGAMDAAAYISSDKWNKIMKKNGLNMVDLR 128 Query: 127 E 127 + Sbjct: 129 D 129 >gi|195059758|ref|XP_001995695.1| GH17893 [Drosophila grimshawi] gi|193896481|gb|EDV95347.1| GH17893 [Drosophila grimshawi] Length = 300 Score = 41.9 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 25/142 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G+ +GK+T L +L K VH+ E P A ++ + E + Sbjct: 4 VIITGLPASGKSTRARQLHDYLAGKGKRVHIISENEAVPKALYEKNAFFNSSQSEKVVRS 63 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD--------RF---LDSSYAYQGERDSSQHL 115 + + A+R L + +++ D R+ + + + Sbjct: 64 D-LKSEASR----------HLNKDDVVILDAGNYIKGFRYELHCMTKAVRTTQCTLFTCI 112 Query: 116 FLDSLQEISVQEVMPDCTIILD 137 L+ +++ PD LD Sbjct: 113 PLEQAWTFNIERNEPDK---LD 131 >gi|304398915|ref|ZP_07380785.1| kinase [Pantoea sp. aB] gi|304353619|gb|EFM17996.1| kinase [Pantoea sp. aB] Length = 167 Score = 41.9 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 36/151 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62 + F G+ G GK+T +L L+ V + VL + E Sbjct: 1 MLYIFSGLPGCGKSTVAKMLSEKLKAVYLRV------------DTIEQVLRNESAAFREM 48 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E I++A AR L G ++ D + +L DS ++ Sbjct: 49 GPEGYFILYALAR---------ENLRLGLPVVTD------------SVNDLNLVRDSFRD 87 Query: 123 ISVQEVMPDCTI-ILDLPVDIGLKRVQNRYS 152 I++ +P I IL + RV+NR S Sbjct: 88 IALSSGVPFLEIEILCSDPEQHRARVENRIS 118 >gi|254519247|ref|ZP_05131303.1| guanylate kinase [Clostridium sp. 7_2_43FAA] gi|226912996|gb|EEH98197.1| guanylate kinase [Clostridium sp. 7_2_43FAA] Length = 212 Score = 41.9 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 52/168 (30%), Gaps = 28/168 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L V TR P + + L+ Sbjct: 4 NRGVLIVISGPSGAGKGTICKELLDKHNNIYISVSATTRSPRAGEV-DGINYYFLTKESF 62 Query: 61 EFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + A + + L EGK ++ + +D A Q + + S+ Sbjct: 63 EEKVSQNGFLEYANVHGNFYGTPKVNVEKMLEEGKDVILE--IDIQGALQVKENFSEG-- 118 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 I LP + +R+ R S E + + F Sbjct: 119 ----------------VFIFILPPSMEELKQRIIKRGSETEESLMTRF 150 >gi|217967600|ref|YP_002353106.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM 6724] gi|217336699|gb|ACK42492.1| riboflavin biosynthesis protein RibF [Dictyoglomus turgidum DSM 6724] Length = 529 Score = 41.9 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 19/101 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I+ +G G+GKTT + L+ D + R V L Sbjct: 315 KIITIDGTAGSGKTTIAKFIAEKLKFDYID-----------SGALYRAVGLITKEKNLST 363 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG--KILLCDRFLDSSY 103 E E I F +N I+ + ++ + DR + S Sbjct: 364 EEEIIGF------LYQNPIKFNFEDKIFRVYISDREITSMI 398 >gi|194768713|ref|XP_001966456.1| GF22188 [Drosophila ananassae] gi|190617220|gb|EDV32744.1| GF22188 [Drosophila ananassae] Length = 300 Score = 41.9 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 11/90 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G+ +GK+T L+ + K VH+ E P L ++ Sbjct: 4 VVITGLPASGKSTRARQLREHFEEKGKRVHLISENEAVP------KALFEKNSHAGDSQK 57 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96 E +V R D R L + +++ D Sbjct: 58 EKVV----RSDLKSEASR-NLNKDDLVILD 82 >gi|169834710|ref|YP_001693273.1| putative guanylate kinase [Clostridium botulinum B1 str. Okra] gi|169834980|ref|YP_001715812.1| putative guanylate kinase [Clostridium botulinum A3 str. Loch Maree] gi|169123258|gb|ACA47093.1| putative guanylate kinase [Clostridium botulinum B1 str. Okra] gi|169409087|gb|ACA57497.1| putative guanylate kinase [Clostridium botulinum A3 str. Loch Maree] Length = 197 Score = 41.9 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 51/214 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEFG------- 63 G+GK+T + L+++ Y+ TR+P E H+ L+ D Sbjct: 17 GSGKST----IAELLEKEGYNYIESYTTRKPRYK--GERG-HIFLNSINDRNDIDILDDG 69 Query: 64 --AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + I +A + +H +G S Y + + + +D + Sbjct: 70 YYPKENVIAYACYKDEHYYATKEQYKNKGT---------SIYIVEVKGVNELRSEIDDAK 120 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + L I R+ RY K+ +I E++ Q + Sbjct: 121 I---------LVLYLRADEQIRRGRMIKRYIDVNGNT-----SKNYLIAERKAQ---ERI 163 Query: 182 RNQPDRC------HIVDSAHSFQSVATNILNIVW 209 + + +++D+ V +I I+ Sbjct: 164 IHDKENFQIIPCDYVIDTNMPITEVLKSIKTIIE 197 >gi|17547348|ref|NP_520750.1| putative deoxyguanosine kinase (DGUO kinase) (DGK) protein [Ralstonia solanacearum GMI1000] gi|17429651|emb|CAD16336.1| putative deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia solanacearum GMI1000] Length = 214 Score = 41.9 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 22/177 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG GAGKT L L+ + P P + Sbjct: 9 IVVEGPIGAGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQE-I 123 ++ A RL + A + G+ ++ D FL D +A Q + + D++ + + Sbjct: 62 RFLLQRAQRLAA----WQKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMAQAL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ D + L + L R+ R E+ D E+ + ++ Sbjct: 117 ALPPQRIDLVVCLQARAEDLLPRIARRAVPYEAGI-------DAEYLERICAAYGEL 166 >gi|302545985|ref|ZP_07298327.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302463603|gb|EFL26696.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 240 Score = 41.9 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 45/228 (19%) Query: 7 ISFE--GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I+ E G +GK++ I + F +R + V E E R Sbjct: 33 IAVEFAGSPKSGKSSTIDTIVHFFKRMGFRVFAPTEGASKRTPEQLRK-----------D 81 Query: 65 EAEAIVFAAARLDHVENVIRPAL------MEGKILLCDRFLDSSYAY---QGERDSSQHL 115 A A + V I L +++ DR S A+ Q ++D Sbjct: 82 RA------AFNVWTVNYAISQLLSAYYDDSRSDLIILDRGCFDSVAWNELQRKKDVMGEN 135 Query: 116 FLDSLQEISVQ----EVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIH 170 +++ ++ + + ++ L+R + E ++ + + Sbjct: 136 EAKVIRDFALHPMWAGFISKL-YLFTCEPEVSLERETAATLTTLEGRTMNR---ETLSEL 191 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHS--FQS----VATNILNIVWELV 212 + + D P ++D+ Q VA +I+ I E + Sbjct: 192 LREYRELRDSLNTYP--LMVIDTTAPGTPQESGYKVAEDIVQIWEEKL 237 >gi|195440943|ref|XP_002068294.1| GK13248 [Drosophila willistoni] gi|194164379|gb|EDW79280.1| GK13248 [Drosophila willistoni] Length = 219 Score = 41.9 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 68/206 (33%), Gaps = 24/206 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GK T + + + + + + R + S G + +AI+ Sbjct: 32 GGPGCGKGTQCAKIVE---KYGF--------THLSSGDLLREEVASDSDK--GRQLQAIM 78 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD-SSQHLFLDSLQEISVQEVM 129 + A V N +L+ G I R SS + + + + ++I+ Sbjct: 79 TSGA---LVPNEEVLSLLNGAI---TRAKGSSKGFLIDGYPREKGQGIAFEEQIAPA--- 129 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189 D + + R+ R + D E + + + I ++ Sbjct: 130 -DLVLYFQCAEETMKDRILARANAAAVKRADDNEATILARLKTFKDNTNAILEQYVEKTL 188 Query: 190 IVDSAHSFQSVATNILNIVWELVQKR 215 +++ + +++ + +++K+ Sbjct: 189 TINANRPVDEIFLDVVQAIDCVLKKK 214 >gi|87201265|ref|YP_498522.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Novosphingobium aromaticivorans DSM 12444] gi|87136946|gb|ABD27688.1| adenylylsulfate kinase [Novosphingobium aromaticivorans DSM 12444] Length = 644 Score = 41.9 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +L+++ L LL G + Sbjct: 476 FTGLSGSGKSTIANLVEKRLHAVGKHTF-----------------LLDGDNVRHGLNKDL 518 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + G I+L A+ + + + SL ++ Sbjct: 519 GFTEADRIENIRRVGEVAKLMTDAGLIVLT--------AFISPFRAER-EMVRSL--MAD 567 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E + +D P+++ R Sbjct: 568 GEF---IEVFIDTPLEVAESR 585 >gi|55978401|ref|YP_145457.1| ABC transporter, ATP-binding protein [Thermus thermophilus HB8] gi|55773574|dbj|BAD72014.1| ABC transporter, ATP-binding protein [Thermus thermophilus HB8] Length = 258 Score = 41.9 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 2/84 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61 G F++ G G+GKTT + LL L+ +V + EP P A A + +LS + Sbjct: 27 GEFLAVLGPNGSGKTTLLRLLAGELRPTEGEVFLLGEPLAVYGPQALARQRAVLSQVREM 86 Query: 62 FGAEAEAIVFAAARLDHVENVIRP 85 V RL H+ RP Sbjct: 87 AFPYTAYEVAFLGRLPHLVGRERP 110 >gi|332172318|gb|AEE21572.1| uridine kinase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 207 Score = 41.9 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 18/167 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--AARHVLLSCG 58 M++ L I+ G G+GK+ L + V + RE A + + Sbjct: 1 MSAPLVIAISGASGSGKSLFTENLLKEFSEDGKHVQILREDHYYRAQDHLPMEEREKNNY 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHL 115 E E + ++H+ AL + + + + A + S+ + Sbjct: 61 DHPKAFEHELL------VEHLH-----ALKNWQSVDYPHYCYKTHTRLAQTEKLMSAPVI 109 Query: 116 FLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ + ++ QE+ P D I +D P+DI L R R ++ Sbjct: 110 IIEGIMLLANQELQPLFDIKIFVDTPLDICLLRRMKRDIAERGRTIE 156 >gi|51894189|ref|YP_076880.1| adenylate kinase [Symbiobacterium thermophilum IAM 14863] gi|68568763|sp|Q67JW4|KAD_SYMTH RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|51857878|dbj|BAD42036.1| Adenylate kinase [Symbiobacterium thermophilum IAM 14863] Length = 216 Score = 41.9 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 40/236 (16%), Positives = 71/236 (30%), Gaps = 58/236 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT------REPGGTPAAEAARHVLLSCGVD 60 I G GAGK T LL ++ T GTP + A+ + G Sbjct: 3 IILMGPPGAGKGTQAVLLA---GQEGIPHISTGDIFRAHMSQGTPLGKLAKEYV-DAGKY 58 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+V + + +P +G + D + R Q LD Sbjct: 59 VPDDVTNAMV--------RDRLAQPDCKKGF--VLDGY---------PRTPEQARALD-- 97 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY----F 162 + ++ + D I +D+P ++ ++R R RE+ D Sbjct: 98 EMLAELGLALDAVINIDVPDELLVERAVGRRVCRSCGATYHVRFNPPREAGRCDRCGGEL 157 Query: 163 ERKDVMIHEKRR---QIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209 ++ EK ++ + + +R V V +I V Sbjct: 158 YQRSDDQEEKVAVRLNLYHSQTAPLLQFYKERGLVRTVRGDQPMDQVTADIKEAVR 213 >gi|293416429|ref|ZP_06659068.1| ATP-binding protein yghR [Escherichia coli B185] gi|291431785|gb|EFF04768.1| ATP-binding protein yghR [Escherichia coli B185] Length = 252 Score = 41.9 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|227484999|ref|ZP_03915315.1| guanylate kinase [Anaerococcus lactolyticus ATCC 51172] gi|227236996|gb|EEI87011.1| guanylate kinase [Anaerococcus lactolyticus ATCC 51172] Length = 199 Score = 41.9 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 4/98 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G + G G GK T + L Y V TR+ + L Sbjct: 1 MKKGFLLVISGPSGVGKGTVLHDLMNTQTNLVYSVSATTRKKRDGEIEGVSYFYLNHDEF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94 ++ E + + +A ++ + + + EGKI++ Sbjct: 61 EKMIEEDKFLEYAHVHNNYYGTPKEFVEKKINEGKIVI 98 >gi|158318128|ref|YP_001510636.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Frankia sp. EAN1pec] gi|158113533|gb|ABW15730.1| sulfate adenylyltransferase, large subunit [Frankia sp. EAN1pec] Length = 640 Score = 41.9 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 34/144 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L + + + LL G + Sbjct: 466 FTGLSGAGKSTIANLVEKRLHEQGFHTY-----------------LLDGDNVRHGLNKDL 508 Query: 69 IVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V A + G I+L S + L+ + I + Sbjct: 509 GFTDADRVENIRRVTEVARLMVDAGVIVLA-----SFISPFRAERQLARDLLEPGEFIEI 563 Query: 126 QEVMPDCTIILDLPVDIGLKRVQN 149 +D P+D+ R + Sbjct: 564 H---------VDTPLDVAESRDRK 578 >gi|113475204|ref|YP_721265.1| shikimate kinase [Trichodesmium erythraeum IMS101] gi|110166252|gb|ABG50792.1| shikimate kinase [Trichodesmium erythraeum IMS101] Length = 184 Score = 41.9 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 37/154 (24%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT LL + L Y T A ++ + + A E Sbjct: 21 GAGKTTVGHLLAQHL---GYSFLDTDNLITQAAGKSINEIF---ATEGEAAFRELETNIL 74 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 + + +N+ G I++ RF S + Sbjct: 75 SEISSYKNL--TIATGGGIVIS-RFNWSYLRHG-------------------------IV 106 Query: 134 IILDLPVDIGLKRVQN---RYSLRESACLDYFER 164 + LD+PV++ R+Q R ++ S L + Sbjct: 107 VWLDVPVEVLYSRLQGDQTRPLIQNSNPLARLQA 140 >gi|260892733|ref|YP_003238830.1| guanylate kinase [Ammonifex degensii KC4] gi|260864874|gb|ACX51980.1| guanylate kinase [Ammonifex degensii KC4] Length = 202 Score = 41.9 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 56/190 (29%), Gaps = 48/190 (25%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M +GL + G G GK T L V TR P E G Sbjct: 1 MKTGLLLVISGPSGVGKGTVCRALLEKDPSIYLSVSVTTRPP---RVGEK-------DGQ 50 Query: 60 DEFGAEAEAIVFAAARLDHVEN-------------VIRPALMEGKILLCDRFLDSSYAYQ 106 D F E + AR + +E + AL G+ +L Sbjct: 51 DYFFVSEERFLEMVARGELLEWARVYSFYYGTPKAPVFEALAAGRDVLL----------- 99 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE- 163 E D + + DC +I LP + R+ R + A Sbjct: 100 -EIDVQGGFKVRENYK--------DCVLIFLLPPSWEELEARLVRRGTEDAQARQFRLNW 150 Query: 164 -RKDVMIHEK 172 ++++ ++ + Sbjct: 151 AKQELSLYHR 160 >gi|312211922|emb|CBX92006.1| similar to guanylate kinase [Leptosphaeria maculans] Length = 203 Score = 41.9 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 66/211 (31%), Gaps = 38/211 (18%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G GAGK+T +S L + + + + H TR P GT + + + Sbjct: 17 IVISGPSGAGKSTILSRLFAEYPDKFGFSISHTTRAPRGTEKNGVEYYFVTKEEFQQLVD 76 Query: 65 E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + E F + +G++ + D + ++ ++ Sbjct: 77 KKGFVEHAQFGGNCYGTSIQAVNDIAEKGRVCILD------------------IEMEGVK 118 Query: 122 EISVQ--EVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ P + P ++ KR+++R + +E A + + + F Sbjct: 119 QVANHPTFPRPR--FLFLSPPSMEVLEKRLRSRATDKEEAIVKRLNQA------RVEMEF 170 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D+ + + V Sbjct: 171 AHSGEAPHDKIVV---NDDLDKAYEEVKKFV 198 >gi|269123503|ref|YP_003306080.1| deoxynucleoside kinase [Streptobacillus moniliformis DSM 12112] gi|268314829|gb|ACZ01203.1| deoxynucleoside kinase [Streptobacillus moniliformis DSM 12112] Length = 227 Score = 41.9 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 74/223 (33%), Gaps = 42/223 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I +G+ G GK++ +L YD + EP + +L + + Sbjct: 24 ICVDGVVGVGKSSLGKILAEK-----YDSVLYEEP-------VIDNPILDKYYYDRKRWS 71 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----------QGERDSSQ 113 + F R I+ A GK + DR + + Q E D + Sbjct: 72 FPLQIFFLNKRFQA----IKNASRIGKCV-MDRSIYGDVIFSKMLVEDGDMTQEEFDLYE 126 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 L + L+ + P I L+ VD L +++ R E + + + H Sbjct: 127 ELLFNMLEHVE----KPALMIYLETSVDSALAKIKKRGRDYEQIVP-RYYWESLDRH--Y 179 Query: 174 RQIFL-----DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R+ F +I D V++ + + I + EL Sbjct: 180 REYFKNYNISEIITINVDEIDFVNNEKDKEYILKLIDEKLSEL 222 >gi|212697275|ref|ZP_03305403.1| hypothetical protein ANHYDRO_01843 [Anaerococcus hydrogenalis DSM 7454] gi|325848776|ref|ZP_08170286.1| adenylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212675724|gb|EEB35331.1| hypothetical protein ANHYDRO_01843 [Anaerococcus hydrogenalis DSM 7454] gi|325480420|gb|EGC83482.1| adenylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 214 Score = 41.9 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 69/233 (29%), Gaps = 54/233 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I G GAGK T L + L D+ T TP A+ + + G Sbjct: 3 IILLGPPGAGKGTQAERLIKELDAVQISTGDIFRTNIKNNTPLGTKAKEYI-NKGQLVPD 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +V D ++ V +GK +L D F + Q E D +I Sbjct: 62 ELTIDLV-----WDALDKV-----EDGKTILLDGFPRNIT--QAEALDEGMQKRD--NKI 107 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRY------------------SLRESACLDYFERK 165 D I +++P D+ ++R+ R + + ++ Sbjct: 108 -------DKVININVPEDVIIERISGRRVNVSTGKVYHIKFNPPKVEGIDDETGEKLIQR 160 Query: 166 DVMIHEKRRQIFLDIARNQ----------PDRCHIVDSAHSFQSVATNILNIV 208 + ++ LD+ +D A + V I + Sbjct: 161 EDDTEAAVKER-LDVYNKHTSVLIDYYNKKGILVTIDGAKTPDEVFDQIKKSL 212 >gi|182418720|ref|ZP_02949993.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237669753|ref|ZP_04529730.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377414|gb|EDT74970.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237654827|gb|EEP52390.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 162 Score = 41.9 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 23/158 (14%), Positives = 49/158 (31%), Gaps = 36/158 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L++ L +V + + + R +L D Sbjct: 3 KLIIIRGNSGSGKTTIAKALQQKL---GNNVMLISQ-------DVIRREILHV-HDGIDT 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 +A + ++ +I I++ + +L E++ Sbjct: 52 KALPL---------IKELILYGKDNCDIVI-------------LEGILNSDWYHTLFELT 89 Query: 125 VQEVMPDCTI--ILDLPVDIGLKRVQNRYSLRESACLD 160 + D D+P + + R + + + D Sbjct: 90 KFKFE-DKIFAYYYDIPFEETILRHYTKSNCNDFGEND 126 >gi|311088601|gb|ADP68587.1| glycosyltransferase [Streptomyces sp. SCSIO 01934] Length = 417 Score = 41.9 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 60/166 (36%), Gaps = 25/166 (15%) Query: 28 LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDH-VENVIRPA 86 L ++VHV P T + ++ L + V + E + L++ + + P Sbjct: 24 LAAAGHEVHVASNPALTASIKSTG--LTAVPVGKDHNLHEMLTENRDSLENPLSDWSTPE 81 Query: 87 LMEGKI--LLCDRFLDS-SYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG 143 L +L F S +AYQ D H +D + PD I D PV Sbjct: 82 LDRHSWEQVLMK-FKVSVMFAYQTYNDCMVHELVDYARHW-----QPDLVIW-D-PVTYA 133 Query: 144 ---LKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 RV R C+D I+ K R++FL QP+ Sbjct: 134 GPVAARVVGAAHARLLWCID--------IYAKMREVFLARLAEQPE 171 >gi|299740360|ref|XP_001838852.2| hypothetical protein CC1G_09229 [Coprinopsis cinerea okayama7#130] gi|298404207|gb|EAU82967.2| hypothetical protein CC1G_09229 [Coprinopsis cinerea okayama7#130] Length = 209 Score = 41.9 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 24/133 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M ++I G GKTT +L + L E AR V+ G Sbjct: 15 MTRTIYIV--GPSSTGKTTLCEVLAKRLGLSG----------SAYITEVARQVMKEKGYT 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-----------QGER 109 + ++H++ E +I+LCDR Y Q R Sbjct: 63 R-EDVGNIQMQMDIMIEHLKREEAGLSDEHRIVLCDRSAIDPVVYARLTAQSSGEDQSGR 121 Query: 110 DSSQHLFLDSLQE 122 + F +L+ Sbjct: 122 LTDSQAFRAALER 134 >gi|257452904|ref|ZP_05618203.1| guanylate kinase [Fusobacterium sp. 3_1_5R] gi|257466715|ref|ZP_05631026.1| guanylate kinase [Fusobacterium gonidiaformans ATCC 25563] gi|315917867|ref|ZP_07914107.1| guanylate kinase [Fusobacterium gonidiaformans ATCC 25563] gi|317059446|ref|ZP_07923931.1| guanylate kinase [Fusobacterium sp. 3_1_5R] gi|313685122|gb|EFS21957.1| guanylate kinase [Fusobacterium sp. 3_1_5R] gi|313691742|gb|EFS28577.1| guanylate kinase [Fusobacterium gonidiaformans ATCC 25563] Length = 187 Score = 41.9 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 73/215 (33%), Gaps = 38/215 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G G GAGK+T +++ L TREP + L + Sbjct: 1 MPKGNLYVVSGPSGAGKSTICRKVRKMLGINLATSATTREPRTGEVHGVDYYFLSHAEFE 60 Query: 61 EFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + E + +A ++ +++ + + +G+ ++ E D L + Sbjct: 61 KKIQEGAFLEYAKVHNNYYGTLKSEVENRVNQGEKVIL------------EIDVQGGLQV 108 Query: 118 DSLQEISVQEVMPDC-TIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 +L PD I P ++ R++ R + E I + + Sbjct: 109 KALY--------PDAHLIFFKTPNLEQLEARLRGRKTDSEE-----------TIQLRLKN 149 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++ + IV+ H+ + +++ I+ E Sbjct: 150 SIEELKCEEKYDICIVN--HTVEQACNDLIQIIEE 182 >gi|229015237|ref|ZP_04172272.1| hypothetical protein bmyco0001_55830 [Bacillus mycoides DSM 2048] gi|228746039|gb|EEL96007.1| hypothetical protein bmyco0001_55830 [Bacillus mycoides DSM 2048] Length = 283 Score = 41.9 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T +LL L KN DV + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTANLLYDILIEKNIDVELFLE 39 >gi|238854772|ref|ZP_04645102.1| cell division protein FtsY [Lactobacillus jensenii 269-3] gi|260664004|ref|ZP_05864857.1| signal recognition particle-docking protein FtsY [Lactobacillus jensenii SJ-7A-US] gi|282933850|ref|ZP_06339198.1| FtsY-like protein [Lactobacillus jensenii 208-1] gi|238832562|gb|EEQ24869.1| cell division protein FtsY [Lactobacillus jensenii 269-3] gi|260561890|gb|EEX27859.1| signal recognition particle-docking protein FtsY [Lactobacillus jensenii SJ-7A-US] gi|281301939|gb|EFA94193.1| FtsY-like protein [Lactobacillus jensenii 208-1] Length = 437 Score = 41.9 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 24/128 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + +++ V + T A A + E+G E V Sbjct: 240 GVNGAGKTTTIGKLAQRFKQEGKKVVLVA--ADTFRAGAVEQL------KEWGKRTETEV 291 Query: 71 FA----AARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI-- 123 A V + ++ L E +L D R ++ + L++I Sbjct: 292 VTGPVQADPASVVYDGVKHGLEEDADYVLVD---------TAGRLQNKQNLMKELEKIER 342 Query: 124 SVQEVMPD 131 ++++++PD Sbjct: 343 TIKKLVPD 350 >gi|296504157|ref|YP_003665857.1| ATP-binding protein [Bacillus thuringiensis BMB171] gi|296325209|gb|ADH08137.1| ATP-binding protein [Bacillus thuringiensis BMB171] Length = 213 Score = 41.9 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 25/164 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT + L+R + V P P E + + L E Sbjct: 26 ISLQGPMASGKTTL----AKRLERCGFSVIY-ENP--YPIVEKRKRLKLDMNSKEG---- 74 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118 F A + +E I+ +G +++ DR + G+ ++ D Sbjct: 75 ----FIANQKMFIEAKIKDFQNAKGSVVIFDRGPEDIEFYTLFYPMVIGKEWDIENELKD 130 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L ++ +E D LD+ R N + S + F Sbjct: 131 ELYKL--RECRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQF 172 >gi|290961593|ref|YP_003492775.1| ABC transporter ATP-binding protein [Streptomyces scabiei 87.22] gi|260651119|emb|CBG74240.1| putative ABC-transporter ATP-binding subunit [Streptomyces scabiei 87.22] Length = 322 Score = 41.9 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 47/200 (23%), Positives = 72/200 (36%), Gaps = 37/200 (18%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58 G+ G GAGKTT + LL L+ + + REPG A S Sbjct: 36 GML----GPNGAGKTTAVRLLTTLLRPDAGSARIAGHDLVREPGAVRRAIGVTGQYASVD 91 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA------YQGERDSS 112 D +F ARL V + PA G ++ DRF + A Y G Sbjct: 92 GD-LTGRQNLRLF--ARLHRVRD---PAGRAGDLI--DRFGLTEAADRPVSTYSGGMRRR 143 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L ++ + + LD GL V +R +R++ E V++ + Sbjct: 144 LDLAASLIRRPA--------VLFLD-EPTTGLDPV-SRNRIRDAVRDLREEGTTVLLTTQ 193 Query: 173 RRQIFLDIARNQPDRCHIVD 192 +L+ A DR ++D Sbjct: 194 ----YLEEADQLADRIVLMD 209 >gi|67467928|ref|XP_650037.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS] gi|56466587|gb|EAL44651.1| hypothetical protein EHI_001780 [Entamoeba histolytica HM-1:IMSS] Length = 215 Score = 41.9 bits (98), Expect = 0.067, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 14/110 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI G G GK+T I LKR L +K +E + + +L + G+ Sbjct: 6 FIVITGGVGVGKSTLIHNLKRSLPKKER--IFIKEYIDFKPSTGKK--MLEETLKGKGSM 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR------FLDSSYAYQGER 109 E +F +D + + A K ++ +R F+ S+ AY R Sbjct: 62 YELQLFI---IDCFKEQLERAKQM-KYVIMERSPIDSIFIFSNEAYFQGR 107 >gi|326790870|ref|YP_004308691.1| guanylate kinase [Clostridium lentocellum DSM 5427] gi|326541634|gb|ADZ83493.1| guanylate kinase [Clostridium lentocellum DSM 5427] Length = 200 Score = 41.9 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 25/168 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL I G G+GK T + L + Q TR+P + Sbjct: 1 MKEGLKIVLSGPSGSGKGTIVKELIKNEQFLLSISVTTRQPRQGEEEGVHYFFKTKEAFE 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A+ E + +A CD + + A+ E + + Sbjct: 61 KMIAQDELLEYACF--------------------CDNYYGTPKAFIEESVKKGKDVILEI 100 Query: 121 Q---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + ++E+ PD I +P L +++R R + + +++ Sbjct: 101 EVQGAQQIKEIYPDAIFIFVIPP--SLAELESRLVGRGTEERNIIDQR 146 >gi|58584579|ref|YP_198152.1| adenylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|81311651|sp|Q5GSW4|KAD_WOLTR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|58418895|gb|AAW70910.1| Adenylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 216 Score = 41.9 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 73/232 (31%), Gaps = 49/232 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTRE--PGGTPAAEAARHVLLSCGVDE 61 + I+ G G+GK T SLL K V + R G+ + + + S + + Sbjct: 1 MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQ 60 Query: 62 FGAEAEAI---VFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQHLF 116 G E + + + R + +L +R+ + Sbjct: 61 DGVICELLYDQLALMDDNFLFDGFPRNLNQAHFLTQILRERY----------NRDVDIVI 110 Query: 117 LDSLQE-ISVQEVMPDCTIILD----------------LPVDIGLKRVQNRYSLRESACL 159 L + +++ + + + LD + R++ R + + + Sbjct: 111 ELQLNDKVAIDRLK-NRLVCLDCKSVYSTSSFKDDNNLVCTRCKSARLEKRIDDSDLSAI 169 Query: 160 DYFERKDVMIHEKR---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D + H + R+ + D+ ++D+ + V I + + Sbjct: 170 DR---RIGEYHVQVKSLREYYR-------DKLLMIDANLNVDQVKQEIESKI 211 >gi|326204210|ref|ZP_08194070.1| Shikimate kinase [Clostridium papyrosolvens DSM 2782] gi|325985721|gb|EGD46557.1| Shikimate kinase [Clostridium papyrosolvens DSM 2782] Length = 167 Score = 41.9 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 70/211 (33%), Gaps = 51/211 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S I G+ G+GKTT L L Y T + R ++ G++ Sbjct: 2 MESPKNIVLIGMPGSGKTTVGKALSERL---GYTFIDTDHLICEMTGKTPRQLVEEDGLE 58 Query: 61 E-FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA++ ++ + ++ G + ++ Sbjct: 59 YFMKVQDEAVL---------------SINDSTCVIST----------GGGLIHSEISMNY 93 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRV-QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L+ I I L+ DI +R+ +R R + L + ++ KR ++ Sbjct: 94 LKSIGF-------VIYLNTKYDIIRERMDTSRKLARTAGTL-------LELYNKRVPLYQ 139 Query: 179 DIARNQPDRCHIVDS-AHSFQSVATNILNIV 208 A +D + +V+ IL ++ Sbjct: 140 KYADAA------IDCDSADPDAVSGTILGVI 164 >gi|198458405|ref|XP_002138536.1| GA24827 [Drosophila pseudoobscura pseudoobscura] gi|198136333|gb|EDY69094.1| GA24827 [Drosophila pseudoobscura pseudoobscura] Length = 670 Score = 41.9 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 MN+G I+ G GAGKTT ++ + + L+ Sbjct: 55 MNTGDLIAILGGSGAGKTTLLAAISQRLR 83 >gi|229543863|ref|ZP_04432922.1| Shikimate kinase [Bacillus coagulans 36D1] gi|229325002|gb|EEN90678.1| Shikimate kinase [Bacillus coagulans 36D1] Length = 185 Score = 41.9 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 65/199 (32%), Gaps = 47/199 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 GAGKTT L L + D+ E G P A + + + + E + Sbjct: 12 GAGKTTVGHALASLLGSRATDLDRWIEEEEGMPPA-----AIFAVKGEAYFRRKETEML- 65 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD- 131 R + VI G + + L+ D Sbjct: 66 -KRATSLAGVIMT---------------------GGGIVMREENVCLLKR--------DG 95 Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 T+ LD +I + R+QN S +A + + + +++KRR +L A ++ Sbjct: 96 VTVFLDCDPEILVSRIQNDPSRPVAAG--RTKEEIISLYKKRRPFYLSCAD------LVI 147 Query: 192 DSA-HSFQSVATNILNIVW 209 D+ S + I + Sbjct: 148 DTTGKSVAEIVAEISGRIK 166 >gi|15604484|ref|NP_221002.1| adenylate kinase [Rickettsia prowazekii str. Madrid E] gi|6225578|sp|Q9ZCS6|KAD_RICPR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|3861178|emb|CAA15078.1| ADENYLATE KINASE (adk) [Rickettsia prowazekii] gi|292572266|gb|ADE30181.1| Adenylate kinase [Rickettsia prowazekii Rp22] Length = 213 Score = 41.9 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 37/237 (15%), Positives = 79/237 (33%), Gaps = 58/237 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + V + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKIDLPHIAV-----------GDIFRTIIKTSTSE---- 45 Query: 65 EAEAIVFAAARLDHVENVIR-PALMEGKIL--LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + N ++ AL+ +I+ + FL SS G L+ + Sbjct: 46 -----------AELINNYVKQGALIPNEIVNQVIKVFLLSSKYKNGYILDGYPRNLEQAK 94 Query: 122 EISVQEVMPDC-TIILDLPVDIGLKRVQNRYSLRESACL--------------------- 159 P I D+ ++ +KRV RYS + + Sbjct: 95 FFEAFIQKPQIKIIYFDVADELLIKRVLGRYSCKNCGKIYNIHFLQPKIEHVCDVCSSSV 154 Query: 160 -DYFERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 DY + + + +KR +++ + +IV++ + Q + +I I+ Sbjct: 155 FDYRKDDNKEVIKKRIKVYKTETYPLIDYYKNSGNFYIVNANKNEQEIENDIQKILK 211 >gi|226227095|ref|YP_002761201.1| guanylate kinase [Gemmatimonas aurantiaca T-27] gi|226090286|dbj|BAH38731.1| guanylate kinase [Gemmatimonas aurantiaca T-27] Length = 215 Score = 41.9 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 68/221 (30%), Gaps = 46/221 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPA-AEAARHV-----LLSCGVDEFGAEA 66 G GKTT L Y V TR P R + L + EF A Sbjct: 13 GGGKTTIARRLLERRSDLGYSVSCTTRAPRDGEVDGRDYRFLTSDAFLTARDAGEFAEWA 72 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + R + + L G+ +L D +D A Q Sbjct: 73 EVHGNFYGTLRSE-----VERVLASGQHVLMD--IDVQGARQ------------------ 107 Query: 125 VQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 PD +I LP ++ R+ R S L + E R ++ + Sbjct: 108 FHAAFPDTVLIFVLPPSGEVLKTRLSARKSESRERLLVRLRNARSELGEVGRYHYV-VVN 166 Query: 183 NQPDRCH-----IVDSAH----SFQSVATNILNIVWELVQK 214 + DR I+D+ +V + ++ +L Q+ Sbjct: 167 DNLDRAVDQVSAIIDAEGLRHDRVHAVEAQVEALIAQLEQE 207 >gi|119587447|gb|EAW67043.1| hCG2032408, isoform CRA_e [Homo sapiens] Length = 4275 Score = 41.9 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1957 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2014 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 2015 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2051 >gi|2344858|emb|CAB11460.1| adenylate kinase [Mycobacterium leprae] Length = 181 Score = 41.9 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 61/206 (29%), Gaps = 33/206 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G GAGK T L L T E R + + G EA Sbjct: 3 VVLLGPPGAGKGTQAQRLAEKL---GIPQIST--------GELFRRNI--EKDTKLGHEA 49 Query: 67 EAIVFAAAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A D ++ L + + D F+ Y E+ + H L+ Sbjct: 50 KKYLDAGDLVPADLTNQLVDDRLNKSDTV--DGFILDGYPRSLEQAKALHEMLER----- 102 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLDIAR 182 + D + + + L+R++ R ++ ++ R + Sbjct: 103 -RGTDIDAVLEFRVSQAVVLERLKGRGRADDTDDVVINRM--------NIYRDETRSLLE 153 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 +D+ + V L+ + Sbjct: 154 YYSSELKTIDAIGTMDEVFARALHAL 179 >gi|313222107|emb|CBY39111.1| unnamed protein product [Oikopleura dioica] Length = 305 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 48/257 (18%), Positives = 89/257 (34%), Gaps = 57/257 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHV--------LL 55 IS EG GK+T I +L+ +++++ T EP T + + LL Sbjct: 15 ISIEGNIATGKSTFIKILEEAAGTEDWEI--TPEPVSTWTQIEGKNPVSLEGSSSGGNLL 72 Query: 56 SCGVDEFGAEAEAIVFAA--ARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERD 110 D+ + A +R+ +P A + + + DR++ +A Sbjct: 73 KLFYDDAKRWSYTFQSFALLSRMRLQRAPFKPRTVARLSERSIHSDRYI---FARNCFET 129 Query: 111 SSQHL------------FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157 L+SL ++ + I L + KR+ R E Sbjct: 130 GLMTETEWSIYKDWSTYLLESLGDLQLDGF-----IYLRCDPKVCDKRMAKRGRPEEQGV 184 Query: 158 CLDYF----ERKDVMIHEKRRQIFL--DIARNQPDRCHIVDSAHSF---QSVA----TNI 204 L+Y E+ + +H + F DI ++ P +D F + + + Sbjct: 185 TLEYLSQLHEKHEKWLHNR---EFHDEDIMQDIP--ILEIDCNEEFHDDEEIKSKMLQQV 239 Query: 205 LNIVWELVQKRVSPLSS 221 V ++ +KR LSS Sbjct: 240 REFVRQVQEKRQEKLSS 256 >gi|195154481|ref|XP_002018150.1| GL17554 [Drosophila persimilis] gi|194113946|gb|EDW35989.1| GL17554 [Drosophila persimilis] Length = 671 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 19/29 (65%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 MN+G I+ G GAGKTT ++ + + L+ Sbjct: 56 MNTGDLIAILGGSGAGKTTLLAAISQRLR 84 >gi|166788546|dbj|BAG06721.1| DYNC2H1 variant protein [Homo sapiens] gi|208967773|dbj|BAG72532.1| dynein, cytoplasmic 2, heavy chain 1 [synthetic construct] Length = 4307 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|283806679|ref|NP_001368.2| cytoplasmic dynein 2 heavy chain 1 isoform 1 [Homo sapiens] gi|311033479|sp|Q8NCM8|DYHC2_HUMAN RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName: Full=Cytoplasmic dynein 2 heavy chain; AltName: Full=Dynein cytoplasmic heavy chain 2; AltName: Full=Dynein heavy chain 11; Short=hDHC11; AltName: Full=Dynein heavy chain isotype 1B Length = 4307 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|122937398|ref|NP_001073932.1| cytoplasmic dynein 2 heavy chain 1 isoform 2 [Homo sapiens] Length = 4314 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|326326027|ref|YP_004250836.1| hypothetical protein VIBNI_0087 [Vibrio nigripulchritudo] gi|323669078|emb|CBJ93122.1| Protein of unknown function [Vibrio nigripulchritudo] Length = 290 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 41/135 (30%), Gaps = 47/135 (34%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA------ARHVLLSC--- 57 I+F G++G GK+T L L YDV V +E R + + Sbjct: 8 IAFLGMDGIGKSTLCRKLSDILTDFGYDVEVVSWTKYCNESEKSYNRDTLRELYVGTFKM 67 Query: 58 --------------------------------GVDEFGAEAEAIVFAAARLDHVEN---- 81 + +E + AA ++ N Sbjct: 68 MYGSATTDTGPFTSFFPNGIDQFFDEQTSETLNNRSVHSNSEFSMLGAALVELAGNFALR 127 Query: 82 --VIRPALMEGKILL 94 VI PAL EGK ++ Sbjct: 128 QHVISPALDEGKFVI 142 >gi|317181931|dbj|BAJ59715.1| adenylate kinase [Helicobacter pylori F57] Length = 191 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSMEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V + + R R D +V+ H + R +FL Sbjct: 105 AQNEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189 >gi|288818037|ref|YP_003432384.1| adenylate kinase [Hydrogenobacter thermophilus TK-6] gi|288787436|dbj|BAI69183.1| adenylate kinase [Hydrogenobacter thermophilus TK-6] gi|308751638|gb|ADO45121.1| adenylate kinase [Hydrogenobacter thermophilus TK-6] Length = 213 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 59/238 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T +L L + T + R + + A Sbjct: 1 MILVFLGPPGAGKGTQAKMLSEEL---GFKHIST--------GDMLREAVKNATPLGLKA 49 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKI-----LLCDRFLDSSYAYQGERDSSQHLFLDS 119 + R D V + I A++E + ++ D F R +Q LDS Sbjct: 50 KE-----YMDRGDLVPDDIVIAMVEQVVLKEKKVILDGF---------PRTIAQATSLDS 95 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDY---- 161 + + I+ ++ ++ + R+ R +E D Sbjct: 96 M--LKKHGREVSKVILFEIDDEVIVDRLTGRRICPNCGAVYHLKFSPPKEDQICDICGTK 153 Query: 162 -FERKDV--MIHEKRRQIFLDIARNQPDRCHI------VDSAHSFQSVATNILNIVWE 210 +R+D + +R +++ D +D+ S + + ++ V + Sbjct: 154 LIQRQDDTEEVIRRRLEVYRRQTAELIDFYKRQNKLISLDAQKSIEELYKDLKKAVED 211 >gi|163790063|ref|ZP_02184498.1| deoxynucleoside kinase family protein [Carnobacterium sp. AT7] gi|159874763|gb|EDP68832.1| deoxynucleoside kinase family protein [Carnobacterium sp. AT7] Length = 221 Score = 41.9 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 72/229 (31%), Gaps = 42/229 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKT+ LL + L + + + +E + + Sbjct: 11 GAGKTSVAELLGKSLNSE----VFYENVDDNEILP----LFYTASEEEQHLKRYPFLLQL 62 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--------------FLDS 119 L I+ AL +L DR + + + + ++ Sbjct: 63 DFLSSRFKSIKEALHNKNNVL-DRSIYEDWYFAKVNTELGRISASEFSIYEKLLNNMMEE 121 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 LQE+ + PD + L + L R+ R E ++ + ++ Q + + Sbjct: 122 LQELPKKA--PDLMVYLQGSFETILYRIGLRGRDFEQ------DQGLMDYYKALWQGYDN 173 Query: 180 IARN----------QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 + DR +V+++ V + + E ++ R++ Sbjct: 174 WVTDHYKASDVLVINIDRIDVVNNSEDADFVVKLVKEKLAE-MESRINE 221 >gi|302670497|ref|YP_003830457.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus B316] gi|302394970|gb|ADL33875.1| ABC transporter ATP-binding protein [Butyrivibrio proteoclasticus B316] Length = 692 Score = 41.9 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 41/160 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I ++ L + DV +++ A+ + +D E +V Sbjct: 50 GINGAGKTTLIKIIIGELSADDGDVTFSKDITWGYLAQ-------NQNIDSENTIYEELV 102 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLD--------SSYAYQ--------- 106 + +EN IR A K + L DR+ S YA++ Sbjct: 103 EVKKDVIDLENNIRLAEENMKHVQGAELEALMDRYTRMQDEFQRKSGYAWKSEVTGVAKG 162 Query: 107 -GERDSSQHLFLDSLQ-----EISVQEV---MPDCTIILD 137 G D + +L +++ ++ PD IILD Sbjct: 163 LGFLDEELDKRISTLSGGQKTRVALGKLLLQKPDL-IILD 201 >gi|170077666|ref|YP_001734304.1| adenylate kinase [Synechococcus sp. PCC 7002] gi|169885335|gb|ACA99048.1| adenylate kinase [Synechococcus sp. PCC 7002] Length = 187 Score = 41.9 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 73/223 (32%), Gaps = 53/223 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G+ + F G GAGK T +L T E R + Sbjct: 1 MAQGVRLIFLGPPGAGKGTQAQVLAE---SCGIPHIST--------GEILRAAI--ANQT 47 Query: 61 EFGAEAEAIVFAAARLDHVE-----NVIRPALMEGK----ILLCDRFLDSSYAYQGERDS 111 E G +A+ V R + V N+IR L E +L D F + Q E + Sbjct: 48 ELGQQAQGFV---DRGELVPDSLILNLIRERLQEQDAQQGWIL-DGFPRN--VSQAEFLN 101 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKD--- 166 + L ++++ +PD T+ V+ L R + + E R+ Sbjct: 102 TLLTELKQQCDVALNLEVPDATL-----VERLLSRGRKDDNQETIRR--RLEVYREQTAP 154 Query: 167 -VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++K Q L VD S + V + + Sbjct: 155 VIDFYQK--QGSL----------KSVDGDRSLEEVTAALEQAI 185 >gi|166364892|ref|YP_001657165.1| shikimate kinase [Microcystis aeruginosa NIES-843] gi|238687539|sp|B0JFW8|AROK_MICAN RecName: Full=Shikimate kinase; Short=SK gi|166087265|dbj|BAG01973.1| shikimate kinase [Microcystis aeruginosa NIES-843] Length = 190 Score = 41.9 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 42/202 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-EAEAIVFA 72 G+GK+T LL R LQ + +D + E A + R + + G F E + + Sbjct: 22 GSGKSTLGELLSRRLQYRFFDTDILIE---RVAGKKIREIFVDEGEATFRELETQVLAEL 78 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 ++ K ++ ++ +M Sbjct: 79 SSLT--------------KTVI------------ATGGGMVLKPMNW--SYLRHGLM--- 107 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 I LD+P++I +KR++ S D + K ++ E+RR ++ R + D Sbjct: 108 -IWLDVPLEILVKRLKQDTSRPLLQSTD-LDSKLELLLEQRRGLY----AEADLRIVVSD 161 Query: 193 SAHSFQSVATNILNIVWELVQK 214 + + IL + +++ Sbjct: 162 -LDTPTDIVEKILTAIPTVIKD 182 >gi|150402658|ref|YP_001329952.1| chromatin associated protein KTI12 [Methanococcus maripaludis C7] gi|150033688|gb|ABR65801.1| Chromatin associated protein KTI12 [Methanococcus maripaludis C7] Length = 257 Score = 41.9 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 42/220 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G+ GK+T + + + KN D + ++ + Sbjct: 1 MLIILTGLPSVGKSTFSKAISKKMAEKNIDNII-----------LGTDLVRESFPVWKES 49 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E I D +I+ AL ++ D D++Y Y +R ++ + Sbjct: 50 YEEFI------RDSNSYLIKNALENNFSVIVD---DTNY-YNSKRRDLMNIAKECDNNYV 99 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLDIARN 183 TI L P+D+ LKR R + + + +E+ D A + Sbjct: 100 --------TIYLKAPLDLLLKRNIERGQKIPNEVIKNMYEKFDTPGT--------KYAWD 143 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 PD VD+ IL+ + ++ + + S + K Sbjct: 144 LPD--ITVDTTEKID--HNEILSKILKIAENKSSKIEEDK 179 >gi|42780219|ref|NP_977466.1| stage V sporulation protein K [Bacillus cereus ATCC 10987] gi|42736138|gb|AAS40074.1| stage V sporulation protein K [Bacillus cereus ATCC 10987] Length = 1930 Score = 41.9 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 34/138 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN FI F G G GKTT L+ ++L+ Y E R L++ V Sbjct: 624 MN---FI-FTGNPGTGKTTIARLVAKYLKALGY-------LSSGHLVEVDRARLVAQYVG 672 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + G + +A++ +A +G +L D AY R +++ Sbjct: 673 QTGPKTQAVIDSA---------------KGGVLFID------EAYSLARGGENDFGKEAI 711 Query: 121 QEISVQ--EVMPDCTIIL 136 + ++ D +IL Sbjct: 712 DTLVKGMEDLREDLVVIL 729 >gi|45185856|ref|NP_983572.1| ACR170Cp [Ashbya gossypii ATCC 10895] gi|44981646|gb|AAS51396.1| ACR170Cp [Ashbya gossypii ATCC 10895] Length = 289 Score = 41.9 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 52/210 (24%), Gaps = 36/210 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T S L +Q + ++ + E V Sbjct: 105 GGPGSGKGTQCSRLVERMQFVHVGAGDLLRDEQNRPGSQYGELIKHHIKEGLIVPQEVTV 164 Query: 71 FAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 R +H R L++G F + ++ V Sbjct: 165 ALLRRAIEEHYRAGRRKFLVDG-----------------FPRKMDQAF--TFEKTVVPSK 205 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR------QIFLDIAR 182 + D P + L+R+ R D E + F Sbjct: 206 F---VLFFDCPERVMLERLLTRGQT-SGRSDDNIESIKKRFRTYVETSMPVVEHF----- 256 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q D+ + + V + V E + Sbjct: 257 AQQDKVVRLSCDQPVEEVYKQVEAAVKERL 286 >gi|293412362|ref|ZP_06655085.1| ATP-binding protein yghR [Escherichia coli B354] gi|291469133|gb|EFF11624.1| ATP-binding protein yghR [Escherichia coli B354] Length = 239 Score = 41.9 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 10 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 69 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 70 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 128 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 129 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 180 >gi|242080247|ref|XP_002444892.1| hypothetical protein SORBIDRAFT_07g000980 [Sorghum bicolor] gi|241941242|gb|EES14387.1| hypothetical protein SORBIDRAFT_07g000980 [Sorghum bicolor] Length = 285 Score = 41.9 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 38/244 (15%), Positives = 71/244 (29%), Gaps = 63/244 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G +GK T L+K A + R + + + A+ Sbjct: 73 ISGAPASGKGTQCELIKTKF-----------GLVHISAGDLLRAEIAAGSDNGKAAKD-- 119 Query: 69 IVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + V E +++P E L D + S SQ + L+ Sbjct: 120 ---FMEKGQLVPDEIVVNMVKERLLQPDAQENGW-LLDGYPRSY---------SQAMALE 166 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164 +L+ + PD I+LD+P ++ ++RV R + Sbjct: 167 TLE------IRPDTFILLDVPEELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 220 Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + EK Q + + V + V I ++ + K+ Sbjct: 221 RFDDTEEKVKLRLQTYYQNIESLLSTYEEIIVKVKGDRTVGDVFAEIEKLLASSLNKKTE 280 Query: 218 PLSS 221 +SS Sbjct: 281 MVSS 284 >gi|296216057|ref|XP_002754438.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Callithrix jacchus] Length = 4299 Score = 41.9 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1968 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2025 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 2026 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2062 >gi|156937855|ref|YP_001435651.1| hypothetical protein Igni_1066 [Ignicoccus hospitalis KIN4/I] gi|221272211|sp|A8ABE2|NTPTH_IGNH4 RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase THEP1; AltName: Full=Nucleoside triphosphate phosphohydrolase gi|156566839|gb|ABU82244.1| protein of unknown function DUF265 [Ignicoccus hospitalis KIN4/I] Length = 171 Score = 41.9 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 18/52 (34%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G GAGK+T + L++ V T P +++ Sbjct: 5 AITGPPGAGKSTLARKVVEELKKAGLKVCGTSCPDVREGGRRVGFLIVDVED 56 >gi|323178695|gb|EFZ64271.1| hypothetical protein ECOK1180_2427 [Escherichia coli 1180] Length = 209 Score = 41.9 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 31/157 (19%) Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQ 126 AR + G I+L DR+ AY G + F+ L + Sbjct: 68 FVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERK 127 Query: 127 EV------MPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD I L++ +++ R R SL + + Sbjct: 128 AFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGA 177 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +D+ + V + + + + R Sbjct: 178 QLVD--------IDANQPLEQVLVDAEKAIMDFMTAR 206 >gi|302348006|ref|YP_003815644.1| Adenylate kinase [Acidilobus saccharovorans 345-15] gi|302328418|gb|ADL18613.1| Adenylate kinase [Acidilobus saccharovorans 345-15] Length = 209 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 10/150 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G+ G GKTT +SLL+ + + + V + ++ + + + Sbjct: 13 KVIVVTGVPGVGKTTVLSLLQEKAKERGLRLRVLNFGDFMLDNAVRKGLIKNRDQIRYLS 72 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + + L EG L+ D + +L L Sbjct: 73 FREQLELQDIAASSIIEEAGSDLKEGDYLIVD---------THAIIKTPLGYLPGLPSNV 123 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + + PD ++++ + R Q R + R Sbjct: 124 INSLRPDMIVVIEADPKEIVAR-QQRDATR 152 >gi|260778896|ref|ZP_05887788.1| hypothetical protein VIC_004303 [Vibrio coralliilyticus ATCC BAA-450] gi|260605060|gb|EEX31355.1| hypothetical protein VIC_004303 [Vibrio coralliilyticus ATCC BAA-450] Length = 179 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 54/178 (30%), Gaps = 33/178 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI F G G+GKT+ I LQ Y A E R V+ A Sbjct: 3 RFIVFTGGPGSGKTSVI----EHLQNLGYK----------TADEIGRRVIQQQVESGGNA 48 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLFLDS-L 120 A R V + G + + DR + SY Y D + L Sbjct: 49 LPWLDK-TAFRDAMVSEEVDKYRRIGVGEEFVFFDRSIVDSYGYSLLEDLALTESLTQHC 107 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ + + P + +S D+ + V +EK R+ + Sbjct: 108 NQL-RHNLQ---VFVF--PPW------KEIFSNDAERKQDF--AEAVATYEKMREAYQ 151 >gi|13508300|ref|NP_110250.1| uridine kinase [Mycoplasma pneumoniae M129] gi|2499091|sp|P75217|URK_MYCPN RecName: Full=Uridine kinase; AltName: Full=Cytidine monophosphokinase; AltName: Full=Uridine monophosphokinase gi|1673952|gb|AAB95929.1| uridine kinase [Mycoplasma pneumoniae M129] gi|301633281|gb|ADK86835.1| uridine kinase [Mycoplasma pneumoniae FH] Length = 213 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 58/170 (34%), Gaps = 30/170 (17%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ ++ G +GKTT ++ + L++K + ++ P + + D Sbjct: 4 KKGILVAIGGGSCSGKTTIADMIYQLLRKKLKVAILPQDNYYKPYKNKSMAQRKAINFDH 63 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A ++ H++N++ GK + Y Y + + + L Sbjct: 64 PDAFDWKLL-----WSHLDNLLM-----GKTV-----AVPMYDYVNYTRKKETIEIGPLN 108 Query: 122 EISVQEVMPDCTIILD----------LPVD-IGLKRVQNRYSLRESACLD 160 + ++ +MP D + V+ G +R+ R D Sbjct: 109 VVILEGLMP----WFDERIAKLCKLKIFVEATGEERLIRRIERDWERGRD 154 >gi|307204436|gb|EFN83143.1| Probable adenylate kinase isoenzyme F38B2.4 [Harpegnathos saltator] Length = 189 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 14/86 (16%), Positives = 35/86 (40%), Gaps = 10/86 (11%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIARNQPD 186 D + D+ + KR+ R ++ + A + +KR +IF +I + D Sbjct: 109 DLILFFDVANETLKKRLLGRAAVSQRADDN------EETIKKRIEIFNSKNNEIVEHYKD 162 Query: 187 RCHIVDSAHSFQSVATNILNIVWELV 212 + +++ + + T + + L+ Sbjct: 163 KVVRINAEGTVDEIFTKVTKALDTLL 188 >gi|238019384|ref|ZP_04599810.1| hypothetical protein VEIDISOL_01248 [Veillonella dispar ATCC 17748] gi|237864083|gb|EEP65373.1| hypothetical protein VEIDISOL_01248 [Veillonella dispar ATCC 17748] Length = 209 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 17/119 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G GAGK T + +++ + Y V TR P E + S E Sbjct: 4 RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAPRVGEV-EGVNYFFRSKEEFE 62 Query: 62 FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105 +A + A D+ + + L EGK +L +RF D+ + Y Sbjct: 63 SLLSEDAFLEYAKVYDNYYGTPKQHVMDLLDEGKSVLLEIDIQGAMQVKERFSDAVFIY 121 >gi|212637863|ref|YP_002314383.1| Deoxyadenosine/deoxycytidine kinase [Anoxybacillus flavithermus WK1] gi|212559343|gb|ACJ32398.1| Deoxyadenosine/deoxycytidine kinase [Anoxybacillus flavithermus WK1] Length = 222 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 74/221 (33%), Gaps = 36/221 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L LQ + + E T L +F + Sbjct: 15 ITIAGTVGVGKSTMTKALADALQFR-----TSFEKVDTNP-------YLDKFYADFKRWS 62 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAYQ-GERDSSQHLFL 117 + F A R + + G + DR + + Y+ G + Sbjct: 63 FHLQIYFLAERFKEQKRIFEY----GGGFVQDRSIYEDTGIFAKMHYEKGTMSKVDYETY 118 Query: 118 DSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 SL E ++ PD I L+ + +KR++ R E + ++ +E+ Sbjct: 119 TSLFEAMVMTPYFPHPDLLIYLEGSFEEIIKRIRERGRPMEQQTPIEYWKEMYERYERWI 178 Query: 175 QIF-----LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F L I N+ D D+ S + + I ++ + Sbjct: 179 NSFNACPVLRININEYDIIR--DA-QSIEPIVAKIGYMIEQ 216 >gi|163784173|ref|ZP_02179109.1| guanylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159880558|gb|EDP74126.1| guanylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 206 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 55/175 (31%), Gaps = 28/175 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M LFI G GKTT +LL + + + TR P L Sbjct: 1 MKGELFI-LSAPAGGGKTTITNLLLKEIPNLTRVITCTTRNPREGEVNGKDYIFLSKEEF 59 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ E + + +A ++ + + L EGK ++ Sbjct: 60 EQGIKEGKFLEYAVVHGNYYGTPKEEVEKLLNEGKDVIL---------------VIDVQG 104 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 + ++ ++ P TI L +P + + R++ R E E Sbjct: 105 MRQIK----GKIRPLTTIFL-IPPSIEELVNRMKKRGDSPEEIQK-RLETAKKEF 153 >gi|47209487|emb|CAF89603.1| unnamed protein product [Tetraodon nigroviridis] Length = 442 Score = 41.5 bits (97), Expect = 0.073, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 12/102 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAA--RHVL 54 I G+ G+GKTT + L L + VH P + + V+ Sbjct: 41 LIVL-GMAGSGKTTFVQRLTAHLHSIEAPPYVINLDPAVHQVPFPANIDIRDTVNYKEVM 99 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G+ G ++ A R D V I + +L D Sbjct: 100 KQFGLGPNGGIVTSLNLFATRFDQVMQFIEKKQQNHRFVLID 141 >gi|303232356|ref|ZP_07319049.1| guanylate kinase [Atopobium vaginae PB189-T1-4] gi|302481540|gb|EFL44607.1| guanylate kinase [Atopobium vaginae PB189-T1-4] Length = 191 Score = 41.5 bits (97), Expect = 0.074, Method: Composition-based stats. Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 28/173 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63 G GAGK T ++ ++ + V TR+P + + L E Sbjct: 6 RLFVISGPSGAGKGTIVARIRELMPNLALTVSATTRKPRDGEVDGESYYFLSDKAFSEKV 65 Query: 64 AEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +A + A H +++ + + G+ ++ +D Sbjct: 66 VQ-DAFLEWAHVHGHCYGTLKSEVERHINTGRSVI--------------------FEIDP 104 Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +V+ + PD +I +P + +R+++R S E + + Sbjct: 105 QGAFNVKAIYPDAVLIFIMPPSLQVLKERLEHRGSEDEQSLALRLHNAAQEMQ 157 >gi|71030694|ref|XP_764989.1| signal recognition particle receptor subunit alpha [Theileria parva strain Muguga] gi|68351945|gb|EAN32706.1| signal recognition particle receptor alpha subunit, putative [Theileria parva] Length = 579 Score = 41.5 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 6/97 (6%) Query: 2 NSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 N G++ I F G+ G GK+T ++ + L+ + V V T + A L Sbjct: 374 NGGIYSIVFLGVNGVGKSTSLAKVAYLLKSNGFKVLVVA--CDTFRSGAVEQ--LKTHTT 429 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96 G + + I+ A+ ++L D Sbjct: 430 NLGLHLFERGYGKDPAQIAKEGIKHAVNNQFDVVLID 466 >gi|307544979|ref|YP_003897458.1| sulfate adenylyltransferase, large subunit [Halomonas elongata DSM 2581] gi|307217003|emb|CBV42273.1| sulfate adenylyltransferase, large subunit [Halomonas elongata DSM 2581] Length = 637 Score = 41.5 bits (97), Expect = 0.075, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 20/97 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G I F G G+GK+T + L+ L R+ Y +LL Sbjct: 469 HAGKCIWFTGYSGSGKSTLANALEVELNRRGYHT-----------------MLLDGDNIR 511 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 G + + A R +++ V R G I++ Sbjct: 512 HGLCKDLGMDEADRAENIRRVGEVARLFAEAGVIVIT 548 >gi|238650951|ref|YP_002916807.1| adenylate kinase [Rickettsia peacockii str. Rustic] gi|259494017|sp|C4K2F8|KAD_RICPU RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|238625049|gb|ACR47755.1| adenylate kinase [Rickettsia peacockii str. Rustic] Length = 212 Score = 41.5 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ +L + + Y G + + + Sbjct: 45 EAELINNYVRQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KR+ RYS + + DY Sbjct: 101 KEKIK---IIYFDVSGELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IV+ + + Q + +I I+ Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210 >gi|159186305|ref|NP_355916.2| putative fructose transport system kinase [Agrobacterium tumefaciens str. C58] gi|159141439|gb|AAK88701.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 220 Score = 41.5 bits (97), Expect = 0.076, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 30/160 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDEFG 63 I+ G G+GK+T + L + + G EA +D F Sbjct: 29 IAIAGAPGSGKSTLAERVVDALAGEGVSAALFPMDGFHYDDAVLEAMNRRAFKGAIDTFD 88 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLC----DRFLDSSYAYQGERDSSQHLFLDS 119 A + +++ ++ DR ++ A G R Q + + Sbjct: 89 AHG------------LRHMLERLKANQDDVVAVPVFDRAIE--IARAGGRLIPQSVDIIV 134 Query: 120 LQ-------EISVQEVMP--DCTIILDLPVDIGLKRVQNR 150 + E + P D T+ +D+ D R+++R Sbjct: 135 CEGNYLLARETPWDRLKPIFDLTVFVDVDEDDLRARLRDR 174 >gi|323143399|ref|ZP_08078084.1| guanylate kinase [Succinatimonas hippei YIT 12066] gi|322416804|gb|EFY07453.1| guanylate kinase [Succinatimonas hippei YIT 12066] Length = 213 Score = 41.5 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 28/173 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ---RKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 LFI GAGK++ I+ L + V H TREP + H + + + Sbjct: 8 LFIV-SAPSGAGKSSLIAALMQRFNLDDSLRLSVSHTTREPRPGETNHVSYHFVSNEEFE 66 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A A A DH + ++ + +GK + D +QG R + Sbjct: 67 ALIAR-NAFYEYAKVFDHYYGTSKEIVEEWINDGKDVFLD------IDWQGARLIREQSP 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 S+ + P + R++ R + E+ I Sbjct: 120 YAK----SIFILPPSL--------EELQNRLKKRGQDSDEVIKKRMEKAKREI 160 >gi|313203673|ref|YP_004042330.1| uridine kinase [Paludibacter propionicigenes WB4] gi|312442989|gb|ADQ79345.1| uridine kinase [Paludibacter propionicigenes WB4] Length = 206 Score = 41.5 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 61/169 (36%), Gaps = 23/169 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L I G G+GK+T + + L + V + ++ ++ L D + Sbjct: 2 LIIGIAGGTGSGKSTVVRKILERLP-QGEVVILPQDSYYRDSSHLPLEERLEINFDHPDS 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLF 116 ++ + H++ L GK + C R ++ + + + Sbjct: 61 IEFELL-----VQHLKE-----LKNGKAIEQPIYSYLTCTRATETITIHPCHVIIVEGIL 110 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FER 164 + L ++++M D + +D D L RV NR + ++ ER Sbjct: 111 V--LTNPELRDMM-DLKVFVDADADDRLIRVINRDIVERGRSVNKVMER 156 >gi|218245345|ref|YP_002370716.1| hypothetical protein PCC8801_0464 [Cyanothece sp. PCC 8801] gi|257058382|ref|YP_003136270.1| hypothetical protein Cyan8802_0478 [Cyanothece sp. PCC 8802] gi|218165823|gb|ACK64560.1| hypothetical protein PCC8801_0464 [Cyanothece sp. PCC 8801] gi|256588548|gb|ACU99434.1| hypothetical protein Cyan8802_0478 [Cyanothece sp. PCC 8802] Length = 231 Score = 41.5 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 36/182 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-- 62 L ++ GI+GAGK + L + L + R + + + Sbjct: 31 LLVALSGIDGAGKGHLANQLSKSLNSLGMKTIIVHGDDWLNL-PHIRFNAKNPAENFYRN 89 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL--------DSSYAYQGERDSSQH 114 G EA+ +++I P + RF+ ++S Y + Sbjct: 90 GFRFEAMF---------KDLILPLKKQ-------RFIQLEANILKETSTHYLPYFYDYED 133 Query: 115 LFLDSLQEISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + + L+ I + + P D +D L+R R + D E + Sbjct: 134 IDIIILEAIYL--IQPTFINDYDLAFWVDCSFKTALERALLRGQ-EGLSKQDTIEAYKTL 190 Query: 169 IH 170 Sbjct: 191 YF 192 >gi|119587443|gb|EAW67039.1| hCG2032408, isoform CRA_a [Homo sapiens] Length = 3663 Score = 41.5 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1957 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2014 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 2015 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2051 >gi|104782309|ref|YP_608807.1| kinase [Pseudomonas entomophila L48] gi|95111296|emb|CAK16016.1| putative kinase [Pseudomonas entomophila L48] Length = 185 Score = 41.5 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 40/151 (26%), Gaps = 47/151 (31%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK+T + L V + G +E E Sbjct: 4 IVILGNAGSGKSTLARAIGARL---GLPVVH------------LDRLFWEPGWEEADDEV 48 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + AL G + D +Y+ + H Sbjct: 49 ------------FRERVVQALAGGSWV-----TDGNYSRRTFDLRLPHA----------- 80 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 D I LD P L+RV R L+ + Sbjct: 81 ----DLVIWLDTPRLTCLRRVIQRSLLKPAR 107 >gi|300724648|ref|YP_003713973.1| adenosine 5'-phosphosulfate kinase [Xenorhabdus nematophila ATCC 19061] gi|297631190|emb|CBJ91885.1| adenosine 5'-phosphosulfate kinase [Xenorhabdus nematophila ATCC 19061] Length = 215 Score = 41.5 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 45/196 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G+GK+T L++ L + + LL G Sbjct: 45 IWFTGLSGSGKSTLAGALEQSLFSQGVKTY-----------------LLDGDNLRHGLCR 87 Query: 67 EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A R +++ V + + G ++L A+ + + +Q Sbjct: 88 DLGFSEADRRENIRRVGEVSKLMVDAGLVVLT--------AFISPNREERQKVRELMQ-- 137 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + Q + + +D P+D+ R + +++ + + + A Sbjct: 138 AGQFIE----VYVDTPLDVCESR-DPKGLYKKARAGELLNFTGID---AVYE-----APE 184 Query: 184 QPDRCHIVDSAHSFQS 199 PD +D + ++ Sbjct: 185 HPDIY--LDGSQPVEA 198 >gi|189425428|ref|YP_001952605.1| dethiobiotin synthase [Geobacter lovleyi SZ] gi|189421687|gb|ACD96085.1| dethiobiotin synthase [Geobacter lovleyi SZ] Length = 264 Score = 41.5 bits (97), Expect = 0.077, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 12/74 (16%) Query: 1 MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M++GLFI+ G + G GKT + L R L+ + +V V + Sbjct: 1 MSNGLFIT--GTDTGVGKTIVAATLARILRLRGVNVGVMKPVTSGCV---------ERNG 49 Query: 60 DEFGAEAEAIVFAA 73 + +AE + +AA Sbjct: 50 ELISEDAELLAWAA 63 >gi|297528531|ref|YP_003669806.1| uridine kinase [Geobacillus sp. C56-T3] gi|297251783|gb|ADI25229.1| uridine kinase [Geobacillus sp. C56-T3] Length = 199 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 15/159 (9%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 GI+G +GKTT + L + L+ + V V E A+ G +E+ E Sbjct: 24 GIDGLSRSGKTTLANQLSQTLREQGISVCVFHM--DDHIVERAKRY--HTGNEEW---FE 76 Query: 68 AIVFAAARLDHVENVIRPALMEGKILL--CDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + R ++ L D D+ S + ++ + + Sbjct: 77 YYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVF-LQR 135 Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 +E P D + LD P +I R ++ ++ + Sbjct: 136 KEWRPFFDFVVYLDCPREIRFARENDQAKQNIQKFINRY 174 >gi|219683951|ref|YP_002470334.1| hypothetical protein BLA_1476 [Bifidobacterium animalis subsp. lactis AD011] gi|219621601|gb|ACL29758.1| conserved hypothetical protein [Bifidobacterium animalis subsp. lactis AD011] gi|289178732|gb|ADC85978.1| Hypothetical cytosolic protein [Bifidobacterium animalis subsp. lactis BB-12] Length = 280 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 M + I EG+ +GK+T +++ L+ + +V E Sbjct: 68 MRT-RLIIVEGLPDSGKSTTAAMVAAELEARGRNVVCVEE 106 >gi|150390550|ref|YP_001320599.1| guanylate kinase [Alkaliphilus metalliredigens QYMF] gi|149950412|gb|ABR48940.1| Guanylate kinase [Alkaliphilus metalliredigens QYMF] Length = 200 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 49/168 (29%), Gaps = 28/168 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G GAGK T L V TR P A L Sbjct: 3 KQGLLIVVSGPSGAGKGTICKRLLEKNPEIKISVSATTRLPRKGEADGVNYQFLDKRKFQ 62 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + E + A D+ + + L +G +L E D + L Sbjct: 63 EMLEKEE-FLEYAQVYDNYYGTPKEYVFENLEKGYDVLL------------EIDIAGALQ 109 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 + +E S + LP + R+ +R + + F Sbjct: 110 IK--EEFSQG------VFVFILPPSLEELKSRIISRGTESKEDIEKRF 149 >gi|307824536|ref|ZP_07654761.1| signal recognition particle-docking protein FtsY [Methylobacter tundripaludum SV96] gi|307734520|gb|EFO05372.1| signal recognition particle-docking protein FtsY [Methylobacter tundripaludum SV96] Length = 664 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + + V + G T A A + + A+ Sbjct: 468 GVNGAGKTTTIGKLAKRLQAQGHSVMLAA--GDTFRAAAVEQLQTWGERNNIHVVAQH-- 523 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A +G +L+ D Sbjct: 524 TGADSASVIYDGVQSAQAKGIDVLIAD 550 >gi|301117886|ref|XP_002906671.1| signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4] gi|262108020|gb|EEY66072.1| signal recognition particle receptor subunit alpha [Phytophthora infestans T30-4] Length = 549 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 61/183 (33%), Gaps = 35/183 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GK+T +S + +L+ K +V + T + A L+ E Sbjct: 346 IVFVGVNGVGKSTSLSKVCYYLKSKGVNVMIAA--CDTFRSGAVEQ--LNQHAKVLDVEL 401 Query: 67 EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A + I+ G +L D R + + +L ++ Sbjct: 402 FQKGYAKDPASVAKEAIKYGTENGYDCVLID---------TAGRMQNNEPLMRALAKLVS 452 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 PD + +G V N D ++ + + ++ + D R +P Sbjct: 453 NN-EPDLVLF------VGEALVGN----------DGIDQ--LSMFDRALADYSD--RREP 491 Query: 186 DRC 188 R Sbjct: 492 HRI 494 >gi|225714490|gb|ACO13091.1| Adenylate kinase isoenzyme 1 [Lepeophtheirus salmonis] gi|290462527|gb|ADD24311.1| Adenylate kinase isoenzyme 1 [Lepeophtheirus salmonis] Length = 197 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 60/207 (28%), Gaps = 40/207 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + R + + + R ++S + Sbjct: 24 GGPGSGKGTQSEKVVRHF-----------DYTHISSGDILRAEVMSNSNRGLQ-----LY 67 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SLQEISVQEV 128 A D V N I L+ ++ + A + ++ ++ Q Sbjct: 68 KLMANGDPVPNPIVNDLIAEVMV--------AKASSSKGFLVDGYPIEEKQAEDFENQIA 119 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR----NQ 184 + LD +I R+ R + F+ + I + + + + Sbjct: 120 PASLVLFLDCSDEILRDRLLKRGN---------FDDTEDAIKNRI-ETYNSRTKPILTKY 169 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWEL 211 + V++ ++ I+ EL Sbjct: 170 INNVKKVNADQDKDQTYEDVKKIISEL 196 >gi|70727435|ref|YP_254351.1| hypothetical protein SH2436 [Staphylococcus haemolyticus JCSC1435] gi|68448161|dbj|BAE05745.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 220 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 35/190 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L L + + E + L D+F + Sbjct: 12 ITIAGTVGVGKSTLTQALADKL-----NFKTSFENVD-------HNPYLDKFYDDFERWS 59 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117 + F A R + G + DR + +A QG + Sbjct: 60 FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHEEQGTMNEDDFKTY 115 Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L + + PD I L+ + ++R++ R E D +K Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECDYNEVIERIKARGRDMEINT-------DPEYWQKLF 168 Query: 175 QIFLDIARNQ 184 + + D N Sbjct: 169 KRYEDWINNF 178 >gi|94313684|ref|YP_586893.1| hypothetical protein Rmet_4762 [Cupriavidus metallidurans CH34] gi|93357536|gb|ABF11624.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 383 Score = 41.5 bits (97), Expect = 0.078, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 28/94 (29%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG + AGK I L + V +P T ++ Sbjct: 172 IVFEGRDAAGKGGAIKRFMEHLNPRGARVVALEKPTDTERSQW----------------- 214 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + + H+ G+I+L DR Sbjct: 215 ----YFQRYIQHLP-------AAGEIVLFDRSWY 237 >gi|312868904|ref|ZP_07729089.1| deoxyguanosine kinase [Lactobacillus oris PB013-T2-3] gi|311095578|gb|EFQ53837.1| deoxyguanosine kinase [Lactobacillus oris PB013-T2-3] Length = 213 Score = 41.5 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 70/223 (31%), Gaps = 30/223 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY-------DVHVTREPGGTPAAEAARHVLLSCGV 59 I+ G GAGKT+ LL L K + + + L+ + Sbjct: 2 IALAGTIGAGKTSLTQLLADHLNSKAFYESVDDNKILPLFYKNPKKYGFLLQIYFLNKRI 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 DE + + R E+ + L D A Q E D L + Sbjct: 62 DEIKDSYDNDLNVLDRSI-FEDALLFKLNA----------DMGRATQTESDIYSSLLANM 110 Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++E+ Q PD I + + + LKR++ R E D ++ + Sbjct: 111 MEELPEQPHQKAPDLLITIQVSFETMLKRIEKRGRSYEQIANDP---SLYSYYQNLNNRY 167 Query: 178 LDIARNQPDRCH-IVDSAH-----SFQSVATNILNIVWELVQK 214 D + ++D + A +L +V + + Sbjct: 168 RDWYAQYDESPKMLIDGDKYDFVEDPTA-AQEVLKMVDRKLAE 209 >gi|317008830|gb|ADU79410.1| shikimate kinase [Helicobacter pylori India7] Length = 162 Score = 41.5 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ L L+ +V T + R + G D F +F Sbjct: 11 GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 +D ++ + P ++ + D+L+ + T Sbjct: 62 NLIDELKTLKTP------HVIST--------------GGGIVVHDNLKGLGT-------T 94 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 L + + +KR+ + + D + K++ EKR+ ++ A I+D+ Sbjct: 95 FYLKIDFETLIKRLNQKEREKRPLLNDLIQAKEL--FEKRQALYEKNAS------FIIDA 146 Query: 194 AHSFQSVATNILNIV 208 + +L + Sbjct: 147 RGGLNNSLKQVLQFI 161 >gi|300172988|ref|YP_003772154.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811] gi|299887367|emb|CBL91335.1| deoxyguanosine kinase [Leuconostoc gasicomitatum LMG 18811] Length = 210 Score = 41.5 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 62/195 (31%), Gaps = 41/195 (21%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT L+ EP G + + Sbjct: 10 GVGKTTLTGLIAEHF---GTKAFY--EPVGDNPVLPL---------YYSDPKQYGFLLQI 55 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119 L+ ++I+ AL + +L DR + D+ + + +D + + Sbjct: 56 YFLNRRFDMIKKALADDNNVL-DRSIYEDALFTSENHKDGNITDAEMSVYTQLLNNMMAE 114 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 LQ++ + PD + + + L R++ R E FE D + RQ + Sbjct: 115 LQKLPKKA--PDLLVYAETDFETILYRIKKRGRDYEQ-----FENNDAL-----RQYYFR 162 Query: 180 IARNQPDRCHIVDSA 194 + D D++ Sbjct: 163 MWSAYRDWFDAYDAS 177 >gi|294615071|ref|ZP_06694957.1| deoxyguanosIne kinase [Enterococcus faecium E1636] gi|291592013|gb|EFF23636.1| deoxyguanosIne kinase [Enterococcus faecium E1636] Length = 219 Score = 41.5 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 46/236 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ ++ + A + V Sbjct: 4 IVLAGTIGAGKSSLTEMMAEHFDSQ-----------------AFYESIDDNEVLPLFYAN 46 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112 E A + L+ I+ A+ + +L DR + DS A + E Sbjct: 47 PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 105 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + ++E+ + + PD + + + D L+R++ R E F+ + Sbjct: 106 DELLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYY 162 Query: 171 EKRRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 ++ + + + I +D + + V I + E+ Q +VS Sbjct: 163 KELNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVS 218 >gi|123969278|ref|YP_001010136.1| adenylate kinase [Prochlorococcus marinus str. AS9601] gi|166980350|sp|A2BTB8|KAD_PROMS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|123199388|gb|ABM71029.1| Adenylate kinase [Prochlorococcus marinus str. AS9601] Length = 182 Score = 41.5 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 47/216 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55 M L F G GAGK T LL + T E R + L Sbjct: 1 MKKHLL--FLGAPGAGKGTQAELLSQ-----------TTSYLHLSTGELLRKEIEMNTNL 47 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 V + E + + V ++R L++ I + G + Sbjct: 48 GIQVKDIMNRGELV-----SDELVLKIVRQNLVKDNI---------GWILDGYPRNLSQA 93 Query: 116 FLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR- 173 DSL E+ + P + LD+P ++ ++R+ R ++ V I++K Sbjct: 94 --DSLNEVLSEINQPLEVVFYLDIPEEVLIERLLLRGRKDDTEETIR---TRVDIYKKTT 148 Query: 174 ---RQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 Q F D++ + +++ ++++++I Sbjct: 149 EPLIQYFKDLSLLEY-----INADRDLKTISSDIKQ 179 >gi|58338191|ref|YP_194776.1| deoxyguanosine kinase [Lactobacillus acidophilus NCFM] gi|227902622|ref|ZP_04020427.1| deoxyguanosine kinase [Lactobacillus acidophilus ATCC 4796] gi|108936025|sp|P0C1G0|DGK2_LACAC RecName: Full=Deoxyguanosine kinase; Short=DGK; Short=DGUO kinase; AltName: Full=Deoxynucleoside kinase complex I F-component gi|58255508|gb|AAV43745.1| deoxyguanosine kinase [Lactobacillus acidophilus NCFM] gi|227869615|gb|EEJ77036.1| deoxyguanosine kinase [Lactobacillus acidophilus ATCC 4796] Length = 228 Score = 41.5 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 81/231 (35%), Gaps = 49/231 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121 + A + L+ + I+ AL + +L DR + + +Q D + +D+ Sbjct: 48 KKYAFLLQVYFLNTRFHSIKNALTQDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106 Query: 122 EISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 E+ + +M PD + +++ D +KR++ R E D ++ Sbjct: 107 EL-LHNMMGELDRMPKKNPDLLVHINVSYDTMIKRIKKRGRPYEQLSYD---STLEDYYK 162 Query: 172 KRRQIFLDIARNQ---PDRCHIVDSAH--------SFQSVATNILNIVWEL 211 + + + P ++D + V I++ + E+ Sbjct: 163 RLLRYYKPWYEKYDYSPK--MVIDGDKYDFMSSEADREIVLDQIVDKLKEV 211 >gi|297269074|ref|XP_002799822.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Macaca mulatta] Length = 4079 Score = 41.5 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1824 VVIVGPSGAGKSTLWRMLRAALCKIGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 1881 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 1882 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 1918 >gi|269797902|ref|YP_003311802.1| guanylate kinase [Veillonella parvula DSM 2008] gi|269094531|gb|ACZ24522.1| guanylate kinase [Veillonella parvula DSM 2008] Length = 209 Score = 41.5 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 17/119 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G GAGK T + +++ + Y V TR P E + S E Sbjct: 4 RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAPRVGER-EGINYFFRSKEEFE 62 Query: 62 FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105 +A + A D+ + + L +GK +L +RF D+ + Y Sbjct: 63 SLLSEDAFLEYAKVYDNYYGTPKQHVMDLLDDGKSVLLEIDIQGAMQVKERFSDAVFIY 121 >gi|302756751|ref|XP_002961799.1| hypothetical protein SELMODRAFT_77790 [Selaginella moellendorffii] gi|300170458|gb|EFJ37059.1| hypothetical protein SELMODRAFT_77790 [Selaginella moellendorffii] Length = 279 Score = 41.5 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 69/229 (30%), Gaps = 49/229 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG---AE 65 G +GK T L+ + + A + + + G Sbjct: 65 ISGAPASGKGTQCELITD---KYGLVHIAAGDLLRAEVAAGTENGIKAQEYMNKGQLVPN 121 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + RL+ + + L++G R SQ L++L Sbjct: 122 EIVVSMVKRRLEEQDAQEKGWLLDGY----------------PRSVSQAEALEALN---- 161 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHE 171 + P I+L +P DI ++RV R + + ++ E Sbjct: 162 --IRPHVFILLQVPEDILVERVVGRRLDPVTGKIYHLTYAPPETPEIEARLTQRSDDTEE 219 Query: 172 KR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 + RQ D+ D VD V ++I +I+ E+VQ Sbjct: 220 RVKLRLKTHRQNVEDVLSIYSDVIVPVDGNRPKTEVFSSIDSILNEMVQ 268 >gi|254383408|ref|ZP_04998760.1| shikimate kinase [Streptomyces sp. Mg1] gi|194342305|gb|EDX23271.1| shikimate kinase [Streptomyces sp. Mg1] Length = 177 Score = 41.5 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 61/190 (32%), Gaps = 41/190 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I G G GK+T +LL L T + + ++ G Sbjct: 1 MNRGPLIVLVGPMGVGKSTVGALLAERL---GVPFLDTDQDVVHRTGRSVAEIVTEDGEP 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F E A AR A + + Sbjct: 58 RFR---ELEHEAVARA--------------------------VAGFPGVLALGGGAVGHG 88 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ +P I LD+ + ++R+ + + R D ER+ + ++RR ++L++ Sbjct: 89 GSRALLAGLP--VIFLDVDLAEAMRRIGS-DTGRPLLAADP-ERRWQELQDERRALYLEV 144 Query: 181 ARNQPDRCHI 190 A R + Sbjct: 145 A-----RFVV 149 >gi|110668668|ref|YP_658479.1| adenylate kinase [Haloquadratum walsbyi DSM 16790] gi|109626415|emb|CAJ52875.1| adenylate kinase [Haloquadratum walsbyi DSM 16790] Length = 222 Score = 41.5 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 69/234 (29%), Gaps = 60/234 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T L + T +A R + E E Sbjct: 15 ILLLGPPGAGKGTQSKRLAEEF---GLEHVTT--------GDALRGN-KQMDISEMDTEY 62 Query: 67 EAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + V ++ AL D ++ Y R+ Q L S+ Sbjct: 63 DTPGAYMDAGELVPDAVVNKIVEEALSS-----ADGYVLDGY----PRNIEQAEVLSSIT 113 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------------------ 163 E+ D I+L + + + R+ R E + E Sbjct: 114 EL-------DVAILLSVSEEELVDRLTGRRVCPECGASYHIEFEPPAETGVCDECGATLT 166 Query: 164 RKDVMIHEKRRQI---FLD----IARNQPDR--CHIVDSAHSFQSVATNILNIV 208 ++D E R + + + + DR V+ + V +I++++ Sbjct: 167 QRDDDTEETVRDRLRVYEENTEPVVEHYRDRDKLVTVNGETTPGDVFDSIVDVI 220 >gi|256545499|ref|ZP_05472861.1| signal recognition particle protein [Anaerococcus vaginalis ATCC 51170] gi|256398895|gb|EEU12510.1| signal recognition particle protein [Anaerococcus vaginalis ATCC 51170] Length = 445 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 23/139 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTTH L R L+++ + + PAA V+ G +AE V Sbjct: 108 GLQGSGKTTHSGKLVRKLKKEGRNPLLVALDVYRPAAIEQLKVV--------GKQAEVEV 159 Query: 71 FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 F + D V+ +++ D R +D L+ I + Sbjct: 160 FEKGKQDPVQTANEAKEYARRNNNDVVIMD---------TAGRLQIDEDLMDELKNI-KK 209 Query: 127 EVMPDCTIILDLPVDIGLK 145 V PD I+L + +G + Sbjct: 210 AVKPD-EILLVVDAMVGQE 227 >gi|229118555|ref|ZP_04247908.1| hypothetical protein bcere0017_48210 [Bacillus cereus Rock1-3] gi|228664936|gb|EEL20425.1| hypothetical protein bcere0017_48210 [Bacillus cereus Rock1-3] Length = 283 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T +LL L KN DV + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTANLLYDILIEKNIDVDLFLE 39 >gi|308182778|ref|YP_003926905.1| adenylate kinase [Helicobacter pylori PeCan4] gi|308064963|gb|ADO06855.1| adenylate kinase [Helicobacter pylori PeCan4] Length = 191 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 72/219 (32%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALDKELSAQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V++ + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------VEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189 >gi|290994098|ref|XP_002679669.1| adenylate kinase [Naegleria gruberi] gi|284093287|gb|EFC46925.1| adenylate kinase [Naegleria gruberi] Length = 178 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 62/207 (29%), Gaps = 42/207 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G G+GK T + L + ++ + E + G G A Sbjct: 2 GGPGSGKGTQCARLVEKYKFAHFSAGDLLRAETSKDTEEGKMISSYIKEGKIVPGEVTIA 61 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 ++ + I + L D F +D ++I + Sbjct: 62 LL---------KKAIMNHEDPNTVFLIDGFP-----------REMKQAVDFERQICFCQF 101 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP--- 185 + D P ++ KR+ R D E +KR Q +++ + P Sbjct: 102 ----VLFFDCPEEVLEKRLLERGKT-SGRSDDNLES-----IQKRFQTYIN--QTMPVVT 149 Query: 186 -----DRCHIVDSAHSFQSVATNILNI 207 ++ +DS+ S V ++ + Sbjct: 150 YFRAYNKVRTIDSSKSVDLVFEDVCKL 176 >gi|282860152|ref|ZP_06269227.1| deoxynucleoside kinase [Prevotella bivia JCVIHMP010] gi|282587041|gb|EFB92271.1| deoxynucleoside kinase [Prevotella bivia JCVIHMP010] Length = 204 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 61/195 (31%), Gaps = 30/195 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GKTT ++L + EP + + Sbjct: 3 IAIAGNIGSGKTTLTTMLAKR---------YDWEPRFESVDYNPYLDDYYKDLKRWSFPM 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--------SSYAYQGERDSSQHLFLD 118 E D +E GK ++ DR + ++YA +++ Sbjct: 54 EVFFLKERFKDLLE-----INQCGKPVVQDRSIYEGVYVFTENNYAMGNLDTRDYETYME 108 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++++ +PD I L V + ++ R E + + E + + Sbjct: 109 LFEDLTDIVKLPDLMIYLRSSVSHLVANIEKRGRSYEQ-------KMPLGYLENINKRYE 161 Query: 179 D-IARNQPDRCHIVD 192 D I R IVD Sbjct: 162 DFILNKYKGRVLIVD 176 >gi|253747872|gb|EET02346.1| Adenylate kinase [Giardia intestinalis ATCC 50581] Length = 193 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 50/220 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I F G+ GAGK+T ++ L L+ + + T + R + G Sbjct: 2 RIIHFLGVPGAGKSTVVNRLC--LE---HPLCTT-----LYIGQIVREEI--QKQTPLGR 49 Query: 65 EAEAIVFAAAR--LDHVENVIRPALMEGK-----ILLCD---RFLDSSYAYQGERDSSQH 114 E + ++ A D + + + + + ILL D R D + AY Sbjct: 50 ELQLMLSQANVLPADAIVPLFQQEIKRHEAARTSILLVDGFPRSADQARAY--------- 100 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 LQ P T+ L ++ + R R+ + + + +IH++ Sbjct: 101 -----LQHFGH----PSLTLCLTASTEV----ITERLMARQQSATSRLDDTEEIIHQRIA 147 Query: 175 QIF------LDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + LD+ + +DS+ F V ++ ++ Sbjct: 148 KAWEHVQPGLDVYIENNCKVETIDSSGCFDEVYASVTGVL 187 >gi|125583882|gb|EAZ24813.1| hypothetical protein OsJ_08592 [Oryza sativa Japonica Group] Length = 141 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 13/87 (14%), Positives = 32/87 (36%), Gaps = 8/87 (9%) Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180 +V ++ P + D + +R+ R R ++ ++ + E + + Sbjct: 43 NVTKITPAFVLFFDCSEEEMERRLLGRNQGRVDDNIETIRKRFKVFVESSLPVIEYY--- 99 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNI 207 N D+ +D+A V ++ I Sbjct: 100 --NAKDKVKKIDAAKPIPEVFEDVKAI 124 >gi|52078509|ref|YP_077300.1| deoxyadenosine/deoxycytidine kinase [Bacillus licheniformis ATCC 14580] gi|52783872|ref|YP_089701.1| deoxyadenosine/deoxycytidine kinase [Bacillus licheniformis ATCC 14580] gi|319648537|ref|ZP_08002752.1| dck protein [Bacillus sp. BT1B_CT2] gi|52001720|gb|AAU21662.1| deoxyadenosine/deoxycytidine kinase [Bacillus licheniformis ATCC 14580] gi|52346374|gb|AAU39008.1| Dck [Bacillus licheniformis ATCC 14580] gi|317389385|gb|EFV70197.1| dck protein [Bacillus sp. BT1B_CT2] Length = 213 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 52/161 (32%), Gaps = 28/161 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + T E + L +F + Sbjct: 12 ITVAGTVGVGKSTLTKELAKRL---GFK---------TSLEEVVNNPYLEAFYQDFERWS 59 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFL 117 + F A R + G + DR + +A +G + Sbjct: 60 FHLQIFFLAERF----KEQKYIYESGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTY 115 Query: 118 DSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 SL E ++ PD + L+ ++ L R+Q R E Sbjct: 116 TSLFEAMVMTPYFPRPDVLVYLEGDLETILDRIQKRGREME 156 >gi|28210904|ref|NP_781848.1| guanylate kinase [Clostridium tetani E88] gi|32171437|sp|Q895Q5|KGUA_CLOTE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|28203343|gb|AAO35785.1| guanylate kinase [Clostridium tetani E88] Length = 208 Score = 41.5 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 47/215 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSC 57 M GL I G G GK T K L+ N+ TR+P + + + Sbjct: 1 MEKGLLIVISGPSGTGKGTVC---KELLRNNNFWFSVSSTTRDPREGEIQGKSYYFMSKE 57 Query: 58 GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 ++ E + + +A ++ ++ + L +GK ++ + +D A Q + + + Sbjct: 58 EFEDKIKENDFLEYAKVYGNYYGTPKSKVIEMLDKGKDVILE--IDIQGALQVKENYKEG 115 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 +F+ IL P + R+ R + E + + F+ Sbjct: 116 IFI----------------FIL--PPSMEELKNRIIKRGTETEESLMTRFKS-------- 149 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 + +I +V+ V + I Sbjct: 150 ---AYKEINYVSKYNYAVVN-----DKVHDAVEKI 176 >gi|242399400|ref|YP_002994824.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739] gi|242265793|gb|ACS90475.1| Signal recognition 54 kDa protein [Thermococcus sibiricus MM 739] Length = 453 Score = 41.5 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 15/127 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT ++ L R+ Q+ Y V V P A + + ++ G++ FG E Sbjct: 112 GIQGSGKTTSVAKLSRYFQKHGYKVGVVCSDTWRPGAYQQLKQLIEPYGIEVFGNPEE-- 169 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 + + + +G ++ +DS R + ++ +++I + Sbjct: 170 ---KNAIKLAKEGVEYFKKKGVDVII---VDS-----AGRHKEEKGLIEEMRQI-SNTIN 217 Query: 130 PDCTIIL 136 P I++ Sbjct: 218 PHEVILI 224 >gi|240850814|ref|YP_002972214.1| adenylate kinase [Bartonella grahamii as4aup] gi|240267937|gb|ACS51525.1| adenylate kinase [Bartonella grahamii as4aup] Length = 192 Score = 41.5 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 75/211 (35%), Gaps = 39/211 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T +L + R V+ E G +A+AI+ Sbjct: 7 GPPGAGKGTQAKMLTEE-----------YNIPHLSTGDMLREVI--AKETEIGKKAKAII 53 Query: 71 FAAARL-DHVENVIRPALMEGKILLCDRFLDS----SYAYQGERDSSQHLFLDSLQEISV 125 + A + D++ N I + DR ++ + G + ++LQ+I Sbjct: 54 SSGALVPDNIVNQI----------VSDRIDETDCVNGFVLDGYPRTVGQA--EALQQILQ 101 Query: 126 -QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 + + D I L + D+ ++R++ R + + V ++ + + + Sbjct: 102 SKNMRLDAVIELCVDEDVLIERMKKRVEETIAAGGQVRLDDNPVAFAKRLVE-YREKTAP 160 Query: 180 IARNQPDR--CHIVDSAHSFQSVATNILNIV 208 +++ +R ++D V I + Sbjct: 161 LSKFYSERGMLKVIDGMIGITEVTRMIRGFL 191 >gi|225463006|ref|XP_002264815.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 518 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 51/242 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T ++ + + D+ + G+ A+ + + Sbjct: 2 ISGAPASGKGTQCEMIVQKFGLVHISTGDLLRSEVSSGSEIGNKAKEYM---DTGRLVPD 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 I+ AR+ + + L++G R +Q L+ L+ Sbjct: 59 EVVIMMVTARISQEDAKEKGWLLDGF----------------PRTFAQAQSLEKLK---- 98 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDYF--ERKDV---------MIHE 171 + PD I+LD+P I + R R + L +F E +++ E Sbjct: 99 --IRPDVYIVLDVPDQILIDRCVGRRVDPVTGKIYHLKFFPSENEEIKARLVTRSDDTEE 156 Query: 172 KRRQIFLDIARNQPDRCH--------IVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 K + L+I + + VD HS V I +++ ++ Q + + + +K Sbjct: 157 KVKSR-LEIYKKNAEAILSTYSTIMNKVDGNHSKDEVFKPIDSLLSKMQQDKENMMKLEK 215 Query: 224 DI 225 I Sbjct: 216 SI 217 >gi|225389116|ref|ZP_03758840.1| hypothetical protein CLOSTASPAR_02862 [Clostridium asparagiforme DSM 15981] gi|225044823|gb|EEG55069.1| hypothetical protein CLOSTASPAR_02862 [Clostridium asparagiforme DSM 15981] Length = 499 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 14/102 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH-VTREPGGTPAAEAARHVLLSCG 58 I+ G G GKTT I+LL RF +Q +DV VTR+ T + L G Sbjct: 376 IAIVGPTGCGKTTVINLLMRFYDVDSGSIQVDGHDVRNVTRKSLRTNFGMVLQETWLKSG 435 Query: 59 VDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILL 94 E + AAR H + I+ ++ Sbjct: 436 TIRENIAYGKPDATEEEIVQAAREAHAYSFIKRMPQGYDTVI 477 >gi|149727798|ref|XP_001490951.1| PREDICTED: similar to deoxyguanosine kinase [Equus caballus] Length = 276 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 74/234 (31%), Gaps = 51/234 (21%) Query: 8 SFEGIEGAGKTTHISLLKRFLQR-----------KNYDVHVTREPGGTPAAEAARHVLLS 56 S EG GK+T + LL + +N T++ T + ++ Sbjct: 42 SIEGNIAVGKSTFVKLLMKTYPEWHIATEPVATWQNIQAVGTQKACTTQSLGNLLDMM-Y 100 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGER 109 + + F + +E + L GK + DR++ + + Sbjct: 101 QEPARWSYMFQTFSFMSRLKIQLEPLPEKLLQAGKAVQIFERSVYSDRYIFA----KNLF 156 Query: 110 DSSQHLFLDS----------LQEIS----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 ++ ++ LQE + + I L + LKR+ R E Sbjct: 157 ENGSLSDIEWHIYQEWHSFLLQEFASRLRLHGF-----IYLRATPQVCLKRLHQRAREEE 211 Query: 156 SA-CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 L Y E+ + ++H + F + N P ++D + F V Sbjct: 212 RGIELTYLEQLHDQHEAWLVHRTTKLHFETLV-NIP--VLVLDVNNDFSEVTKQ 262 >gi|20093462|ref|NP_613309.1| cytidylate kinase [Methanopyrus kandleri AV19] gi|22001657|sp|Q8TZB3|KCY_METKA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|19886285|gb|AAM01239.1| Cytidylate kinase [Methanopyrus kandleri AV19] Length = 193 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 39/215 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G+ G+G TT L + A E + V E + Sbjct: 8 ITIGGLPGSGTTTMARRLAEHY---GLKHVYAGKIFREMAEERGMDLEEFSKVAEDNPDI 64 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + R R A EG ++L R +++ GE D + L +L+ Sbjct: 65 DLEI---DRRQ------REAAEEGDVILEGR--LAAFVAAGELDHVKGPDLATLK----- 108 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF------LDI 180 I L P+++ +RV R + + ++ ++ ++I+ L + Sbjct: 109 -------IWLKAPLEVRAERVAKREGIDVEEARRRIQEREKSELKRYKEIYGVDPTDLSL 161 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQK 214 ++D++ S + + + L+++ Sbjct: 162 YD------LVLDTSRWSEDETFSILKAAIDPLLER 190 >gi|307106381|gb|EFN54627.1| hypothetical protein CHLNCDRAFT_11683 [Chlorella variabilis] Length = 155 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 25/132 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G+ +GK+T + L +++ +V V E + + ++ Sbjct: 3 LIVISGLPCSGKSTAAAALAEVCRQRGQEVQVVDE--DSVHLQRNISYAADAASEKVARG 60 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGERDSSQ---H 114 ++ A R L +I++ D R+ A Q Sbjct: 61 T--LLSAMDR----------CLTRSRIVIFDTHNNIKGYRYQLWCIARQAATRYCLVHVD 108 Query: 115 LFLDSLQEISVQ 126 D+ ++ + Q Sbjct: 109 TPPDTCRQWNQQ 120 >gi|294795095|ref|ZP_06760230.1| putative conjugative relaxase domain protein [Veillonella sp. 3_1_44] gi|294454457|gb|EFG22831.1| putative conjugative relaxase domain protein [Veillonella sp. 3_1_44] Length = 861 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 2 NSGLFISFEGIEGAGKTT---HISLLKRFLQRKNYDVHVTREPG 42 +S +I+ EGI G+GKTT LL + +V G Sbjct: 442 SSNKYIAVEGIAGSGKTTMLEQAKLLYE---SQGVNVIGMAFTG 482 >gi|269797507|ref|YP_003311407.1| TrwC relaxase [Veillonella parvula DSM 2008] gi|269094136|gb|ACZ24127.1| TrwC relaxase [Veillonella parvula DSM 2008] Length = 861 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 6/44 (13%) Query: 2 NSGLFISFEGIEGAGKTT---HISLLKRFLQRKNYDVHVTREPG 42 +S +I+ EGI G+GKTT LL + +V G Sbjct: 442 SSNKYIAVEGIAGSGKTTMLEQAKLLYE---SQGVNVIGMAFTG 482 >gi|158320596|ref|YP_001513103.1| cytidylate kinase [Alkaliphilus oremlandii OhILAs] gi|226723073|sp|A8MFE4|KCY_ALKOO RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|158140795|gb|ABW19107.1| cytidylate kinase [Alkaliphilus oremlandii OhILAs] Length = 217 Score = 41.5 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 35/231 (15%), Positives = 85/231 (36%), Gaps = 49/231 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFG 63 I+ +G GAGK+T + L R + +L+ +D Sbjct: 6 IAIDGPAGAGKSTIAKRIAERL-----------NITYIDTGAMYRALTYKVLANNIDITN 54 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRF--LDSSYAYQGERDSSQHLFLD 118 + + + + ++ I ++GK++ + R ++ ++ + + + +D Sbjct: 55 EKTIIELAQNSNIQFLQENI---YLDGKMINEEI--RSIEINKKVSHVAKIKEVREILVD 109 Query: 119 SLQEISVQ------------EVMPDCT--IILDLPV-DIGLKRVQNRYSLRESACLDYFE 163 + ++I++ V+P+ T I L V + L+R +D E Sbjct: 110 AQRKIALGQDVIMDGRDIGTHVLPNATLKIFLTASVQERALRRYLELKKKGIEVDIDELE 169 Query: 164 RKDVMIHEK----RRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVW 209 + I + ++ F + + Q I+D+ + + V I+N++ Sbjct: 170 K---DIMNRDNIDSQRAFAPLVKAQDA--IIIDTTGLTIEDVVERIINLLK 215 >gi|308506977|ref|XP_003115671.1| hypothetical protein CRE_18504 [Caenorhabditis remanei] gi|308256206|gb|EFP00159.1| hypothetical protein CRE_18504 [Caenorhabditis remanei] Length = 473 Score = 41.5 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 33/110 (30%), Gaps = 3/110 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L F + + V E + L Sbjct: 80 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDAQQSYIFQR- 138 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 ++ ++++ N +++CDR AY D SQ L Sbjct: 139 -DLLATMHQIENTFFNQASAIKDRNVLVICDRGCMDPSAYSSPEDWSQML 187 >gi|212695490|ref|ZP_03303618.1| hypothetical protein ANHYDRO_00006 [Anaerococcus hydrogenalis DSM 7454] gi|325846141|ref|ZP_08169235.1| signal recognition particle protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|212677490|gb|EEB37097.1| hypothetical protein ANHYDRO_00006 [Anaerococcus hydrogenalis DSM 7454] gi|325481734|gb|EGC84769.1| signal recognition particle protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 445 Score = 41.5 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 23/139 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTTH L R L+++ + + PAA V+ G +AE V Sbjct: 108 GLQGSGKTTHSGKLVRKLKKEGRNPLLVALDVYRPAAIEQLKVV--------GGQAEVEV 159 Query: 71 FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 F + D V+ +++ D R +D L+ I + Sbjct: 160 FEKGKQDPVKTANEAKEYARRNNNDVVIMD---------TAGRLQIDEDLMDELKNI-KK 209 Query: 127 EVMPDCTIILDLPVDIGLK 145 V PD I+L + +G + Sbjct: 210 AVKPD-EILLVVDAMVGQE 227 >gi|194365198|ref|YP_002027808.1| hypothetical protein Smal_1420 [Stenotrophomonas maltophilia R551-3] gi|194348002|gb|ACF51125.1| conserved hypothetical protein [Stenotrophomonas maltophilia R551-3] Length = 170 Score = 41.5 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 63/179 (35%), Gaps = 36/179 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T L + L + V ++ + L + D+ + A+ + AA Sbjct: 21 GAGKST----LSQQLAAQPRSVLISED-----------AWLAALYPDQIHSIADYLQCAA 65 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-SLQEISVQEVMPDC 132 A D + +R L G ++ D ++ + + R+ + L Sbjct: 66 ALRDVLTQHVRAILKAGVSVVLDFPFNTPASREWGRELFDSAGVAHQLH----------- 114 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 LD+P I R++ R + E F+ D + R +A + ++ Sbjct: 115 --FLDVPDPICKARLRARNARGEHP----FQASDEAFEQITRHF---VAPAATEGFVVI 164 >gi|18976856|ref|NP_578213.1| GTPase [Pyrococcus furiosus DSM 3638] gi|18892461|gb|AAL80608.1| GTP binding protein [Pyrococcus furiosus DSM 3638] Length = 248 Score = 41.5 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 11/102 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK----------NYDVHVTREPGGTPAAEAARHVL 54 + I+F G G+GKTT R+L+ + + R ++ Sbjct: 1 MIIAFLGTAGSGKTTLTGAFGRYLEENYRVAYVNLDTGVENLPYKPDIDVRDFITVRDLM 60 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G GA E+ R++H N I +L D Sbjct: 61 KE-GYGPNGAIVESYDRLLTRVEHYINKILELEKSNDYVLID 101 >gi|330828337|ref|YP_004391289.1| sulfate adenylyltransferase, large subunit [Aeromonas veronii B565] gi|328803473|gb|AEB48672.1| Sulfate adenylyltransferase, large subunit [Aeromonas veronii B565] Length = 196 Score = 41.5 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 44/207 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ GAGK+T L++ L + + LL G Sbjct: 27 IWFTGLSGAGKSTLAGALEQALAAQGKHTY-----------------LLDGDNVRHGLCG 69 Query: 67 EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AAR +++ V + + G I+L A+ + + L L E Sbjct: 70 DLGFDDAARQENIRRVGEVAKLMVDAGLIVLT--------AFISPFRAERALVRSLLGE- 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 E + + +D P+ I +R + A ++ + A Sbjct: 121 --GEFVE---VFVDAPLAICEERDPKGLYKKARAG-------EITNFTGIDSAYE--APE 166 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWE 210 QP+ H++++ ++ +L + + Sbjct: 167 QPE-IHLLNAGKPLDTLVEELLTALRQ 192 >gi|296332945|ref|ZP_06875403.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|296149909|gb|EFG90800.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] Length = 221 Score = 41.5 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + + E P E H + + Sbjct: 12 ITVAGTVGVGKSTLTKALAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119 + F A R + G + DR + D+ A +G + S Sbjct: 63 QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKIDYKTYTS 117 Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175 L E ++ PD I L+ ++ L R++ R E Y+E +H + Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEERGREMELQTSRSYWE----EMHTRYEN 173 Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F + + + + +++ S +++ I +++ E Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDESSIENIVDQIASVIHE 213 >gi|281202878|gb|EFA77080.1| signal recognition particle receptor alpha subunit [Polysphondylium pallidum PN500] Length = 669 Score = 41.5 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GK+T+++ + +L Y V + T + A L + E Sbjct: 464 IVFSGVNGVGKSTNLAKICYWLTAHGYKVMMAA--CDTFRSGAIEQ--LKTHAERLNVEV 519 Query: 67 EAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + I A ++L D R + + +L ++ Sbjct: 520 FERGYGKDAASIAGEAIDYARATNHDVVLID---------TTGRMQNNEPLMRALSKLVN 570 Query: 126 QEVMPDCTII 135 Q + D + Sbjct: 571 QNTI-DLVLF 579 >gi|253687392|ref|YP_003016582.1| Shikimate kinase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259585306|sp|C6DB04|AROL_PECCP RecName: Full=Shikimate kinase 2; Short=SK 2 gi|251753970|gb|ACT12046.1| Shikimate kinase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 173 Score = 41.5 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 44/211 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G G GKTT L + L YD T V+ G Sbjct: 1 MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AL + + +R + ++ G + Sbjct: 56 GFRQRESL-----------------ALQQ---VTSNRCIIAT----GGGMVLAEANRRFM 91 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQI-FL 178 + I L ++ +R++ + L +++ R+ + Sbjct: 92 HDKGT-------VIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +A H++D++ + +++ ++L + Sbjct: 145 GVAH------HVIDASQAPEAIVASVLKALR 169 >gi|119587444|gb|EAW67040.1| hCG2032408, isoform CRA_b [Homo sapiens] Length = 2231 Score = 41.5 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1644 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 1701 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 1702 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 1738 >gi|113869037|ref|YP_727526.1| deoxynucleoside kinase [Ralstonia eutropha H16] gi|113527813|emb|CAJ94158.1| deoxynucleoside kinase [Ralstonia eutropha H16] Length = 213 Score = 41.5 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 25/176 (14%), Positives = 52/176 (29%), Gaps = 26/176 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G+GKT+ L R LQ + P + + Sbjct: 8 IVVEGPVGSGKTSLAQRLARTLQAQ-------ELPDSARRSPFLEPFYRDPARHALALQL 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEIS 124 + R ++ L +++ + A + L I+ Sbjct: 61 WCL---TQRAVQLQQWQAGVLAGQRMV-----TNFLMAKDRLHAALTLSDDELALYDAIA 112 Query: 125 VQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHE 171 + +P D I+L + +R+ R E+ +++ ++ + H Sbjct: 113 ARLDLPPQRADLVIVLQATPSLLRERIVRRGEPGEAGIDEHYLQRLAGAYGELFHR 168 >gi|170764158|ref|ZP_02633280.2| guanylate kinase [Clostridium perfringens E str. JGS1987] gi|170661352|gb|EDT14035.1| guanylate kinase [Clostridium perfringens E str. JGS1987] Length = 215 Score = 41.5 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 61/217 (28%), Gaps = 56/217 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L V TR+P H L Sbjct: 8 NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRKPRVGEVDGVNYHFLTKEEFK 67 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + AE + + +H E + + L EGK ++ Sbjct: 68 QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 105 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E + I LP + +R+ R S + + F+ Sbjct: 106 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 156 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200 + +I +V D+ +++ Sbjct: 157 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 186 >gi|260775896|ref|ZP_05884792.1| type IV secretory pathway VirD4 component [Vibrio coralliilyticus ATCC BAA-450] gi|260608312|gb|EEX34481.1| type IV secretory pathway VirD4 component [Vibrio coralliilyticus ATCC BAA-450] Length = 604 Score = 41.5 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 39/104 (37%), Gaps = 7/104 (6%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR---HVLLSC-GVDEFGA 64 EG G+GK+ I +++ + V + G + R VLL+ Sbjct: 186 IEGTTGSGKSVLIREFLAWIRARGDRAVV-YDKGCSFVGTFYRPETDVLLNPYDARSVNW 244 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQ 106 + A AA +H + + PA +G R + +S A Q Sbjct: 245 DLWADATDAADFEHQASALIPASPQGDPFWNESARSVFASVARQ 288 >gi|261207167|ref|ZP_05921856.1| deoxynucleoside kinase [Enterococcus faecium TC 6] gi|289565288|ref|ZP_06445739.1| deoxyguanosine kinase [Enterococcus faecium D344SRF] gi|260078795|gb|EEW66497.1| deoxynucleoside kinase [Enterococcus faecium TC 6] gi|289162944|gb|EFD10793.1| deoxyguanosine kinase [Enterococcus faecium D344SRF] Length = 217 Score = 41.5 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 39/234 (16%), Positives = 78/234 (33%), Gaps = 42/234 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++ + Y+ E A E Sbjct: 2 IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114 A + L+ I+ A+ + +L DR + DS A + E Sbjct: 47 QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + ++E+ + + PD + + + D L+R++ R E F+ +++ Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162 Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 + + + I +D + + V I + E+ Q +VS Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVS 216 >gi|312879952|ref|ZP_07739752.1| guanylate kinase [Aminomonas paucivorans DSM 12260] gi|310783243|gb|EFQ23641.1| guanylate kinase [Aminomonas paucivorans DSM 12260] Length = 194 Score = 41.5 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 71/222 (31%), Gaps = 39/222 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G+ G GAGK T LL + L Y V TR+P H + Sbjct: 1 MSRGILFVLSGPSGAGKGTLRRLLFQRLPGLAYSVSCTTRQPRPGETEGVEYHFVSEEAF 60 Query: 60 DEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E A+ + A DH + +R L G ++ + +D A Q ++ + Sbjct: 61 REMIAQGR-FLEWAKVHDHFYGTRASDVREVLERGLDVVLE--IDVQGALQVKKAIPEA- 116 Query: 116 FLDSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 T+ +D P V+ +R+ R + Sbjct: 117 ----------------VTLFIDPPSVEELERRLSCRGTEAPEERRLRLMNAKAE------ 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 ++ AR+ R + ++ ++V KR+ Sbjct: 155 ---MEQARSYDHRVV----NDHLEEALEDLAHLVEFYRGKRM 189 >gi|116334119|ref|YP_795646.1| deoxynucleoside kinase [Lactobacillus brevis ATCC 367] gi|116099466|gb|ABJ64615.1| Deoxynucleoside kinase [Lactobacillus brevis ATCC 367] Length = 215 Score = 41.5 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 33/158 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 G GKTT + L EP G P + + Sbjct: 10 GVGKTTLTGKIASHL---GTQAFF--EPVGDNPVLPLYYR----------DPKQYGFLLQ 54 Query: 73 AARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLD 118 L+ ++I+ AL + +L DR + D+ + + + ++ Sbjct: 55 IYFLNKRFSMIKRALADDNNVL-DRSIYEDALFTRENNAEGNITDTELEVYLNLLDNMMN 113 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 L E+ + PD + D D L R++ R E Sbjct: 114 ELNELPKKA--PDLLVYADADFDTILHRIKKRGRDYEQ 149 >gi|158320456|ref|YP_001512963.1| guanylate kinase [Alkaliphilus oremlandii OhILAs] gi|158140655|gb|ABW18967.1| Guanylate kinase [Alkaliphilus oremlandii OhILAs] Length = 200 Score = 41.5 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 28/169 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 + GL I G GAGK T L + + TR+P + + + Sbjct: 3 SKGLLIVVSGPSGAGKGTICKELLNQNPQIKVSISATTRQPRNGEI-KGINYFFIDKNKF 61 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + + + A D+ + + L +G +L L Sbjct: 62 ELMIKNDDFLEYATVYDNYYGTPKEYVMKNLEDGNDVL--------------------LE 101 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 +D + + +++ D I LP L+ ++NR R + L E++ Sbjct: 102 IDIVGALQIKDRFKDAVFIFILPP--SLEELKNRIVGRGTESLADIEKR 148 >gi|197337770|ref|YP_002158247.1| hypothetical protein VFMJ11_A0698 [Vibrio fischeri MJ11] gi|197315022|gb|ACH64471.1| conserved hypothetical protein [Vibrio fischeri MJ11] Length = 181 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 4/43 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKNYDVHVTR 39 M FI F G G+GKTT I+ LK + V T+ Sbjct: 1 MYKDNFIVFTGGPGSGKTTVINELKARDFFCSEEAGRKVIQTQ 43 >gi|194391182|dbj|BAG60709.1| unnamed protein product [Homo sapiens] Length = 179 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 30/81 (37%), Gaps = 12/81 (14%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------NQPD 186 + D +I ++R R + + + + EKR Q +L + + Sbjct: 100 VLFFDCNNEICIERCLERGKSSGRSDDNR---ESL---EKRIQTYLQSTKPIIDLYEEMG 153 Query: 187 RCHIVDSAHSFQSVATNILNI 207 + +D++ S V ++ I Sbjct: 154 KVKKIDASKSVDEVFDEVVQI 174 >gi|260903784|ref|ZP_05912106.1| Dephospho-CoA kinase [Brevibacterium linens BL2] Length = 386 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 75/223 (33%), Gaps = 44/223 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 GI GAGK+T +L +V EP A+ +++ A Sbjct: 9 GI-GAGKSTVSEILADHGAAIIDADKIAREVVAPGEPLLAQLAQRFGEDVIADDGGLDRA 67 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + AAA D ALM + DR + A+ + + + + + Sbjct: 68 Q----LAAAAFGDEESTAALNALMHPA--IRDR----TIAHF-AEHADAEVVVHDVPLLV 116 Query: 125 VQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + P +++D+P ++ L+R+ + + + Sbjct: 117 ENGMTPSYHLNLLVDVPAELRLQRLMSARGMDRADAESRI----------------ARQA 160 Query: 183 NQPDRC----HIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 R I+D+A ++ + V LV+ R+ P ++ Sbjct: 161 TDEQRYAVCDVIIDNAGEV----SDTRDTVARLVEDRIFPFAA 199 >gi|58584837|ref|YP_198410.1| guanylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497743|sp|Q5GS56|KGUA_WOLTR RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|58419153|gb|AAW71168.1| Guanylate kinase [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 195 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 37/219 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ + GAGKTT + L V TR+P + Sbjct: 5 NEGVLLVLSSPSGAGKTTILERLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTKKEFH 64 Query: 61 EFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E EA ++ A ++ + I L G +L S +QG + + Sbjct: 65 ELC-EAGQMLEYARVFENFYGIPKSFIEQNLSSGISVLL------SIDWQGAFHLFELMR 117 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + IL P ++ ++ R R S E + + Sbjct: 118 EKVIS-----------VFIL--PP--SMEELRLRLQKRNSDSASEIE-------HRLAEA 155 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV-WELVQK 214 ++++ +++ I +I+ E +++ Sbjct: 156 QKEMSKRDKYDYVVIN--DDIDKSVEEISSILDKERLKR 192 >gi|194335555|ref|YP_002017349.1| Guanylate kinase [Pelodictyon phaeoclathratiforme BU-1] gi|194308032|gb|ACF42732.1| Guanylate kinase [Pelodictyon phaeoclathratiforme BU-1] Length = 194 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 30/216 (13%), Positives = 61/216 (28%), Gaps = 36/216 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G GK+T +++ + + V T E + L+ E Sbjct: 7 HKGKLIVFSAPSGTGKSTIATMVLERIPNIQFSVSATTRTKRAGEQEGVNYYFLTREEFE 66 Query: 62 FGAE----AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E F + + + G +L D D + + Sbjct: 67 EKIRNGGFIEHEFFFGNHYGTLLDKTEQIIDRGTHMLLD------------LDVKGAMNV 114 Query: 118 DSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L + + L P +++ +R++ R S E + ER + + Sbjct: 115 RQLFPGNS------LLLFLKPPSIEVLEERLKGRESEDEESLKARLERARLEL------G 162 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + A + + IV + + Sbjct: 163 Y---ADRFDEVIV----NDHLDDAVEAVTAIVSKFL 191 >gi|327269108|ref|XP_003219337.1| PREDICTED: cytoplasmic dynein 2 heavy chain 1-like [Anolis carolinensis] Length = 4302 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 26/119 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G GAGK+T +L+ L + V ++ P A R +L G + Sbjct: 1972 VVIVGPSGAGKSTLWRMLRAALGKIGKVV---KQYTMNPKAMPRRQLL---GHIDMDTRE 2025 Query: 67 EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ +AR V + P + ++CD +++SL + Sbjct: 2026 WSDGVLTNSAR-QVVREL--PDVTS--WIICD-------------GDIDPEWIESLNSV 2066 >gi|300690553|ref|YP_003751548.1| deoxyadenosine kinase [Ralstonia solanacearum PSI07] gi|299077613|emb|CBJ50248.1| putative Deoxyadenosine kinase [Ralstonia solanacearum PSI07] Length = 214 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 22/177 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT L L+ + P P + Sbjct: 9 IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQE-I 123 ++ A RL A G+ ++ D FL D +A Q + + D++ + + Sbjct: 62 RFLLQRAQRLAA----WHKATQAGERIVADSFLPRDRLFA-QLTLPADELALYDAMAQAL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + D + L + L R+ R ES D E+ + ++ Sbjct: 117 ALPQQRIDLVVCLQARAEDLLPRIAKRAVPYESGI-------DAEYLERICAAYGEL 166 >gi|262341071|ref|YP_003283926.1| guanylate kinase [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272408|gb|ACY40316.1| guanylate kinase [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 191 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 14/38 (36%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M G I G G+GKTT L + V T Sbjct: 1 MKKGKMIILSGPSGSGKTTISHCLLSKFPDLKFSVSCT 38 >gi|241762575|ref|ZP_04760649.1| kinase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241372836|gb|EER62533.1| kinase [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 172 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 15/31 (48%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 + I F G+ G GKTT LL + L V Sbjct: 1 MLIVFTGLPGCGKTTIAQLLSKKLSAVYIRV 31 >gi|227550903|ref|ZP_03980952.1| deoxyguanosine kinase [Enterococcus faecium TX1330] gi|293379315|ref|ZP_06625461.1| deoxynucleoside kinase [Enterococcus faecium PC4.1] gi|227180001|gb|EEI60973.1| deoxyguanosine kinase [Enterococcus faecium TX1330] gi|292642111|gb|EFF60275.1| deoxynucleoside kinase [Enterococcus faecium PC4.1] Length = 219 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 36/231 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++ + Y+ E A E Sbjct: 4 IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 48 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114 A + L+ I+ A+ + +L DR + DS A + E Sbjct: 49 QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 107 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + ++E+ + + PD + + + D L+R++ R E D ++ Sbjct: 108 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLSFDPSLYDYYKELNR 167 Query: 172 KRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + Q + + + DR + V+ + + + V I + E+ Q ++ Sbjct: 168 RYDQWYEEYKESPKIQIDGDRYNFVEDSQAKEEVLKMIEEKLAEIRQTELA 218 >gi|148224441|ref|NP_001089007.1| deoxycytidine kinase, gene 1 [Xenopus laevis] gi|37780367|gb|AAO64436.1| deoxycytidine kinase 1 [Xenopus laevis] gi|133737001|gb|AAI33782.1| DCK1 protein [Xenopus laevis] Length = 265 Score = 41.5 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 82/242 (33%), Gaps = 41/242 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHV---------L 54 IS EG GK+T +++L + ++++V + R + + L Sbjct: 26 ISIEGNIATGKSTFVNILTKA--SEDWEVVPEPIARWCNIQSCKDEFEELTNSQKSGGNL 83 Query: 55 LSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSYA 104 L ++ + A R ++ P L + + DR++ +S Sbjct: 84 LQMMYEKPERWSFTFQSYACLSRIRAQLKALGGKLKESENPVLFFERSVYSDRYIFASNL 143 Query: 105 YQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 Y+ E + + D + ++ D I L + L R+ R E Sbjct: 144 YETECMNETEWTVYQDWHDWMNSQFGADLELDGIIYLRAIPEKCLNRIHCRGRDEEQGIP 203 Query: 159 LDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV---ATNILNIVWE 210 ++Y E+ + + H R F + + P +D F+ +++ V E Sbjct: 204 MEYLEKLHYKHESWLHHRTMRTDFAYL-QEIP--ILTLDVNEDFKDNKPKQESLIEKVKE 260 Query: 211 LV 212 + Sbjct: 261 FL 262 >gi|291279809|ref|YP_003496644.1| guanylate kinase [Deferribacter desulfuricans SSM1] gi|290754511|dbj|BAI80888.1| guanylate kinase [Deferribacter desulfuricans SSM1] Length = 203 Score = 41.5 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 55/167 (32%), Gaps = 27/167 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCG 58 M GAGKT+ + L + + Y + + TREP + Sbjct: 1 MYKTKLFVVSAPSGAGKTSLCNKLINKYKDRLKYSISYTTREPRIGEIDGQDYFFIDEKK 60 Query: 59 VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E E + +A ++ + +I L EG ++ D +D A Q Sbjct: 61 FKEMIENNEFLEWAVVHGNYYGTSKKIIDKYLAEGYDVVLD--IDPQGARQ--------- 109 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 ++E PD I + +K ++ R R + ++ Sbjct: 110 ---------IKEKYPDAVFIFIVAP--SMKELRTRLINRRTESMEKI 145 >gi|229587385|ref|YP_002860423.1| putative guanylate kinase [Clostridium botulinum Ba4 str. 657] gi|229260212|gb|ACQ51249.1| putative guanylate kinase [Clostridium botulinum Ba4 str. 657] Length = 197 Score = 41.5 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 64/211 (30%), Gaps = 45/211 (21%) Query: 14 GAGKTTHISLLKRFLQRKNYDVH---VTREP------GGTPAAEAARHVLLSCGVDEFGA 64 G+GK+T + L+++ Y+ TR+P G + D + Sbjct: 17 GSGKST----IAELLEKEGYNYIKSYTTRKPRYKGERGHIFLNSINDRNDIDILDDGYYL 72 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + I +A + +H +G S Y + + + +D ++ Sbjct: 73 KENVIAYACYKDEHYYATKEQYRNKGT---------SIYIVEVKGVNELRSEIDDVEI-- 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + L I R+ RY D +R+ + + Sbjct: 122 -------LVLYLKADEKIRRGRMIKRYIDVNGHS-------DSNYLMAQREA-QERIIHD 166 Query: 185 PDRC------HIVDSAHSFQSVATNILNIVW 209 ++ +++D+ V +I I+ Sbjct: 167 KEKFQIIPCDYVIDANMQISEVLKSIKTIIE 197 >gi|260814394|ref|XP_002601900.1| hypothetical protein BRAFLDRAFT_124584 [Branchiostoma floridae] gi|229287203|gb|EEN57912.1| hypothetical protein BRAFLDRAFT_124584 [Branchiostoma floridae] Length = 255 Score = 41.5 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 30/186 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDEF- 62 ++ EG GK+T ISLL+ + ++ + ++R +E + LS Sbjct: 16 VAVEGNIAVGKSTFISLLEE--ESSDWAIVGEPLSRWQNVQCHSEKEEEITLSQKHGGNL 73 Query: 63 ------GAEAEAIVFAA------ARLD------HVENVIRPALMEGKILLCDRFLDSSYA 104 A F + R H+E P + + + DR+ + Sbjct: 74 LDMFYSDPRRWAFTFQSYVCLSRMRHQLKPAPGHLETAAEPVVFYERSVYSDRYWADAKV 133 Query: 105 YQGERDSSQHLF---LDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-C 158 + + D + ++ E+ D I L ++ L+R++ R E Sbjct: 134 RFLWVIGYRSGWNIYCDWHSTMMAAMGELKLDGIIYLRAEPEVCLERLKLRGRPEERPVS 193 Query: 159 LDYFER 164 L+Y ++ Sbjct: 194 LEYLDQ 199 >gi|15827979|ref|NP_302242.1| adenylate kinase [Mycobacterium leprae TN] gi|221230456|ref|YP_002503872.1| adenylate kinase [Mycobacterium leprae Br4923] gi|13431601|sp|O33007|KAD_MYCLE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|254806998|sp|B8ZS96|KAD_MYCLB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|13093532|emb|CAC30786.1| probable adenylate kinase [Mycobacterium leprae] gi|219933563|emb|CAR71928.1| probable adenylate kinase [Mycobacterium leprae Br4923] Length = 181 Score = 41.5 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 63/210 (30%), Gaps = 41/210 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G GAGK T L L T E R + + G EA Sbjct: 3 VVLLGPPGAGKGTQAQRLAEKL---GIPQIST--------GELFRRNI--EKDTKLGHEA 49 Query: 67 EAIVFAAAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A D ++ L + + D F+ Y E+ + H L+ Sbjct: 50 KKYLDAGDLVPADLTNQLVDDRLNKSDTV--DGFILDGYPRSLEQAKALHEMLER----- 102 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLD--- 179 + D + + + L+R++ R ++ ++ I+ D Sbjct: 103 -RGTDIDAVLEFRVSQAVVLERLKGRGRADDTDDVVINRM------------NIYRDETA 149 Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +D+ + V L+ + Sbjct: 150 SLLEYYSSELKTIDAIGTMDEVFARALHAL 179 >gi|257893355|ref|ZP_05673008.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408] gi|257829734|gb|EEV56341.1| deoxynucleoside kinase [Enterococcus faecium 1,231,408] Length = 217 Score = 41.5 bits (97), Expect = 0.092, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 80/233 (34%), Gaps = 40/233 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ ++ ++A + V Sbjct: 2 IVLAGTIGAGKSSLTEMMAEHF-----------------GSQAFYESIDDNEVLPLFYAN 44 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112 E A + L+ I+ A+ + +L DR + DS A + E Sbjct: 45 PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 103 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMI 169 L + ++E+ + + PD + + + D L+R++ R E D + Sbjct: 104 DELLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLSFDPSLYDYYKEL 163 Query: 170 HEKRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + + Q + + + DR + V+ + + + V I + E+ Q ++ Sbjct: 164 NRRYDQWYEEYKESPKIQIDGDRYNFVEDSQAKEEVLKMIEEKLAEIRQTELA 216 >gi|254167167|ref|ZP_04874020.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469] gi|197624023|gb|EDY36585.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469] Length = 316 Score = 41.5 bits (97), Expect = 0.092, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 6/55 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----HVTREP--GGTPAAEAAR 51 G I F G G GK+T I + L + V R P GG+ + R Sbjct: 46 KGRIICFTGPPGVGKSTLIDHVISILTERGKKVGVILVDPRSPYTGGSLLGDRIR 100 >gi|14591457|ref|NP_143537.1| signal recognition particle protein Srp54 [Pyrococcus horikoshii OT3] gi|3258124|dbj|BAA30807.1| 445aa long hypothetical signal recognition particle protein [Pyrococcus horikoshii OT3] Length = 445 Score = 41.5 bits (97), Expect = 0.092, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G++G+GKTT ++ L R+ Q++ Y V V P A LL E Sbjct: 109 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEV 160 >gi|313893402|ref|ZP_07826974.1| guanylate kinase [Veillonella sp. oral taxon 158 str. F0412] gi|313442043|gb|EFR60463.1| guanylate kinase [Veillonella sp. oral taxon 158 str. F0412] Length = 209 Score = 41.5 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 15/118 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 GL I G GAGK T + +++ + Y V +T E + S E Sbjct: 4 RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAARVGEEEGVNYFFRSKEEFEI 63 Query: 63 GAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105 +A + A D+ + + L +GK +L +RF D+ + Y Sbjct: 64 LLSEDAFLEYAKVYDNYYGTPKQHVMDLLDDGKSVLLEIDIQGAMQVKERFSDAVFIY 121 >gi|217077882|ref|YP_002335600.1| cytidylate kinase [Thermosipho africanus TCF52B] gi|226723093|sp|B7IE32|KCY_THEAB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|217037737|gb|ACJ76259.1| cmk cytidylate kinase [Thermosipho africanus TCF52B] Length = 222 Score = 41.5 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 83/234 (35%), Gaps = 39/234 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G G+GKTT +L L T A + L E ++ Sbjct: 5 IAIDGPAGSGKTTVAKILADKL---GI------YYLDTGAMYRIIGLYLDKKGVENDSDI 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKIL----------LC-DRFLDSSYAYQGERDSSQHL 115 E + +E + + GK + +C ++ + + Q Sbjct: 56 ERELSTIK----LEFINGDFYINGKRVGDEIRTPYAGICASKYAKKAIVREFLTRIQQK- 110 Query: 116 FLDSLQEISVQEVMPDC--TIILDLPVDI-----GLKRVQNRYS--LRESACLDYFERKD 166 + + I V+ D +I D V I +R + RY L + + Y E + Sbjct: 111 -ISKNENIVVEGR--DIGTVVIPDAEVKIFLVASAEERAKRRYKELLDKGVKVSYEEVLN 167 Query: 167 VMIHEKRRQIFLDIA-RNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSP 218 +I ++ +IA QPD ++DS + + V IL +V E + ++ Sbjct: 168 EIILRDKQDTEREIAPLRQPDDAVLIDSTKYTIEEVINKILEVVLEKCKLKLQK 221 >gi|126344211|ref|XP_001380179.1| PREDICTED: similar to Adenylate kinase 5 [Monodelphis domestica] Length = 209 Score = 41.5 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 60/204 (29%), Gaps = 39/204 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 G G+GK T L ++ + E A + R +LL Sbjct: 41 GGPGSGKGTQCEKLV---RKYGFAHVCVAELLRDELASGSPRSLLLGAAPP--------- 88 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 AA LD ++ + G +G + L + + Sbjct: 89 --AADVLDLLKEALLARWAPG--------------LRGFLMEASPQELKQAHDFEPRVGP 132 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR-- 187 P + ++ D +R+ R A + + L +A + + Sbjct: 133 PQLVMCMECSADTMSRRLLQRDGESPEAVARRL--------QTYYRASLAVAAHYEETAP 184 Query: 188 CHIVDSAHSFQSVATNILNIVWEL 211 H +++ S + V ++ + V + Sbjct: 185 FHKINAEGSPEEVFLHVCSAVDAI 208 >gi|2370245|emb|CAA73635.1| thymidine kinase [Saimiriine herpesvirus 2] gi|30348524|emb|CAC84316.1| thymidine kinase [Saimiriine herpesvirus 2] Length = 527 Score = 41.5 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 55/175 (31%), Gaps = 27/175 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58 FI EG G GKTT + + L +V EP + E + L Sbjct: 210 FFIFLEGSIGVGKTTLLKSMNGIL--GGKNVLAFHEPIAYWTDVFSNSLEEVYKLTLPAK 267 Query: 59 VDEFGAEAEA----------IVFAAARLDHVENVIRPALMEGKILLCDRFLDS------S 102 V A+ ++ D + + L ++ DR S Sbjct: 268 VGRTSNSAKLLACQLKFASPLLALKTATDRLSSHKNSLLSSDMWVMFDRHPLSATVVFPY 327 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 +Q S HL + Q D I+L+L LKRV+ R E + Sbjct: 328 MHFQNGFLSFSHLIQLWSSFKASQG---DNIILLNLNSQENLKRVRKRNRKEEKS 379 >gi|15594157|dbj|BAB64926.1| signal recognition particle protein 54 [Pyrococcus furiosus] Length = 443 Score = 41.5 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 16/115 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT ++ L R+ Q++ Y V V P A R VL ++ FG E Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQVLDRYHIEVFGNPQE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + + +G I++ D R ++ +++I Sbjct: 165 ---KDAIKLAKEGVDYFKSKGVDIIIVD---------TAGRHKEDKALIEEMKQI 207 >gi|12230630|sp|O59307|SRP54_PYRHO RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 Length = 443 Score = 41.5 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 25/52 (48%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G++G+GKTT ++ L R+ Q++ Y V V P A LL E Sbjct: 107 GVQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEV 158 >gi|257456491|ref|ZP_05621687.1| cytidylate kinase/ribosomal protein S1 [Treponema vincentii ATCC 35580] gi|257446151|gb|EEV21198.1| cytidylate kinase/ribosomal protein S1 [Treponema vincentii ATCC 35580] Length = 801 Score = 41.5 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ +G G+GK+T +L L T G+ A VL S G DE GA Sbjct: 1 MIIAIDGPAGSGKSTVAKMLAADL-------GFTFMNTGSFYRAMALAVLRSLGGDESGA 53 Query: 65 EAE 67 AE Sbjct: 54 GAE 56 >gi|224049009|ref|XP_002188737.1| PREDICTED: XPA binding protein 1, GTPase [Taeniopygia guttata] Length = 371 Score = 41.5 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 21 GMAGSGKTTFVQRLAAHLHGQRCPPYVINLDPAVHSLPFPANIDIRDTVKYKEVMKQYGL 80 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I K ++ D Sbjct: 81 GPNGGIVTSLNLFATRFDQVMKFIEKRQNASKYVIID 117 >gi|217076198|ref|YP_002333914.1| ffh signal recognition particle protein [Thermosipho africanus TCF52B] gi|217036051|gb|ACJ74573.1| ffh signal recognition particle protein [Thermosipho africanus TCF52B] Length = 435 Score = 41.5 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 22/125 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTT + L L++K + PAA ++ G + + V Sbjct: 105 GLQGSGKTTSAAKLANLLKKKGKKTFLVAADTYRPAA--IDQLI------TLGKKIDVPV 156 Query: 71 FAAARLD---HVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 F R D V I+ G +++ D R ++ L+EI Sbjct: 157 FYGDRKDPVKIVREAIKEVKDSGYNVVIFD---------TAGRLHVDDEMMNELEEI-KD 206 Query: 127 EVMPD 131 + PD Sbjct: 207 ILNPD 211 >gi|115391067|ref|XP_001213038.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114193962|gb|EAU35662.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 217 Score = 41.2 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 70/214 (32%), Gaps = 43/214 (20%) Query: 8 SFEGIEGAGKTTHISLLKRFLQR---KNYDVHVTRE----PGGTPAAEAARHVLLSCGVD 60 G G GK+T L L + D H G P +A R D Sbjct: 35 VVTGPAGCGKSTVGKGLANELHYPFLEGDDFHSASNKQKMGSGIPLTDADR-------WD 87 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A EA A R G ++ C S Q RD + + + Sbjct: 88 WLIALREA----ATRALSPSQANNFHPPAGVVVAC------SALKQKYRDVMR---IATY 134 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 SVQ + L L ++ L+RV R + K VM+ + R L+ Sbjct: 135 NSPSVQIHF----VYLKLDEEVLLRRVAQRQAHY---------MKSVMVQSQLRD--LEE 179 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + D +D+ V T +L +V E + + Sbjct: 180 PKGEWD-ALTIDANAPPAQVQTEVLKLVKEKMAE 212 >gi|67920602|ref|ZP_00514122.1| Guanylate kinase [Crocosphaera watsonii WH 8501] gi|67858086|gb|EAM53325.1| Guanylate kinase [Crocosphaera watsonii WH 8501] Length = 184 Score = 41.2 bits (96), Expect = 0.095, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 59/186 (31%), Gaps = 28/186 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M SG I G G GK T + L V TR P + L Sbjct: 1 MASGKLIVLTGPSGVGKGTLVRSLLVRHPELYLSVSATTRSPREGEIEGKDYYFLNKSAF 60 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + + + +A + + +G I+L L Sbjct: 61 ETMIEQNQLLEWAEYAGNYYGTPRTKVEEKIDQGLIVL--------------------LE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ + S+++ PD I LP + R+++R + E A L ER + K Sbjct: 101 IEVVGANSIKDSFPDALRIFILPPSLEELEHRLRSRKTDTEEAILRRLERAKEEL--KVS 158 Query: 175 QIFLDI 180 + F Sbjct: 159 EEFDQR 164 >gi|34581390|ref|ZP_00142870.1| adenylate kinase [Rickettsia sibirica 246] gi|28262775|gb|EAA26279.1| adenylate kinase [Rickettsia sibirica 246] Length = 212 Score = 41.2 bits (96), Expect = 0.096, Method: Composition-based stats. Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKIDLLHI-----------AIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ +L + + Y G + + + Sbjct: 45 EAELINNYVKQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--KFFESFI 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KR+ RYS + + DY Sbjct: 101 KEKIK---IIYFDVSDELLIKRILGRYSCKNCGKIYNRYFLQPKTDNVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IV+ + + Q + +I I+ Sbjct: 158 KDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 210 >gi|302392206|ref|YP_003828026.1| guanylate kinase [Acetohalobium arabaticum DSM 5501] gi|302204283|gb|ADL12961.1| guanylate kinase [Acetohalobium arabaticum DSM 5501] Length = 192 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 61/218 (27%), Gaps = 42/218 (19%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G GK T I+ L Q +Y V TR+P + E Sbjct: 7 GKLIILSGPSAVGKGTVITALMDEYQDISYSVSVTTRQPRVDEEDGVDYFFVSETEFKEM 66 Query: 63 GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E I +A ++ + + L G+ ++ Sbjct: 67 IDNDEFIEWAKVHENYYGTPKKCVEDTLASGQDVIL---------------EIDIQGAAQ 111 Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +++ Q I P + R+Q R + + A E Sbjct: 112 VKKSYQQG-----VFIFLAPPSLEELEARIQKRGTDSQKAIEVRMENATEE--------- 157 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ A N +V+ V + + ++ +R Sbjct: 158 MERAENYD--YIVVN-----DEVEEAVEKVKSVIIAER 188 >gi|282850131|ref|ZP_06259510.1| guanylate kinase [Veillonella parvula ATCC 17745] gi|294791785|ref|ZP_06756933.1| guanylate kinase [Veillonella sp. 6_1_27] gi|294793646|ref|ZP_06758783.1| guanylate kinase [Veillonella sp. 3_1_44] gi|282579624|gb|EFB85028.1| guanylate kinase [Veillonella parvula ATCC 17745] gi|294455216|gb|EFG23588.1| guanylate kinase [Veillonella sp. 3_1_44] gi|294457015|gb|EFG25377.1| guanylate kinase [Veillonella sp. 6_1_27] Length = 209 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 17/119 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G GAGK T + +++ + Y V TR P E + S E Sbjct: 4 RGLLIVISGPSGAGKGTICANIRKEMPNLVYSVSMTTRAPRVGE-KEGINYFFRSKEEFE 62 Query: 62 FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105 +A + A D+ + + L +GK +L +RF D+ + Y Sbjct: 63 SLLSEDAFLEYAKVYDNYYGTPKQHVMDLLDDGKSVLLEIDIQGAMQVKERFSDAVFIY 121 >gi|229442335|gb|AAI72913.1| dynein, cytoplasmic 2, heavy chain 1 [synthetic construct] Length = 2167 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T +L+ L + V T P P + H+ E+ Sbjct: 1975 VVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHI--DMDTREWSDG 2032 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ +AR V+R ++CD +++SL + Sbjct: 2033 ---VLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIESLNSV 2069 >gi|229060224|ref|ZP_04197593.1| uridine kinase [Bacillus cereus AH603] gi|228719106|gb|EEL70718.1| uridine kinase [Bacillus cereus AH603] Length = 186 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 21/90 (23%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIA-- 181 D TI +D P+DI + R R D+ E IH R+ +L+ Sbjct: 101 DVTIFIDTPLDIAMARRILR---------DFKEDTMSEIHNNLKHYMTHARKAYLEAIHT 151 Query: 182 -RNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++ D ++D + S + I+ + Sbjct: 152 VKSNSD--IVLDGSLSISEIIDQIMEELNR 179 >gi|15791234|ref|NP_281058.1| signal recognition particle receptor [Halobacterium sp. NRC-1] gi|169236990|ref|YP_001690190.1| signal recognition particle receptor SRalpha [Halobacterium salinarum R1] gi|10581862|gb|AAG20538.1| signal recognition particle receptor [Halobacterium sp. NRC-1] gi|167728056|emb|CAP14844.1| signal recognition particle receptor SRalpha [Halobacterium salinarum R1] Length = 373 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 18/156 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ L R+L+ + + + G T A A + + + G + Sbjct: 177 IVFTGVNGVGKTTTIAKLARYLESEGFSSVLA--NGDTYRAGANQQI--EEHAEALGVKC 232 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 V + + A ++L D R + + L+++ Sbjct: 233 ITHEQGGDPTAVVYDAVEYADANDVDVVLGD---------TAGRLHTSDDLMSQLEKLD- 282 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160 + V PD T+ + + + NR E++ +D Sbjct: 283 RVVDPDVTVF--VDEAVAGQDAVNRAREFDEASAVD 316 >gi|54024423|ref|YP_118665.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Nocardia farcinica IFM 10152] gi|54015931|dbj|BAD57301.1| putative sulfate adenylyltransferase subunit 1 [Nocardia farcinica IFM 10152] Length = 612 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 17/72 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T L+R L + LL G A+ Sbjct: 447 GLSGSGKSTVAVELERRLVAEGRPAF-----------------LLDGDNLRHGLNADLSF 489 Query: 71 FAAARLDHVENV 82 AA R ++V V Sbjct: 490 SAADRAENVRRV 501 >gi|316970965|gb|EFV54816.1| adenylate kinase isoenzyme 1 [Trichinella spiralis] Length = 199 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 64/209 (30%), Gaps = 43/209 (20%) Query: 14 GAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G+GK T + + L D+ G+ + ++ S + E Sbjct: 21 GSGKGTQCAKIVDKYNLTHLSSG--DLLRAEVNSGSERGGQLKDIMASG--ELVALEIVL 76 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + A L+ ++ R L++G RD Q ++ E+ Sbjct: 77 DLVKEAMLEAIKKGSRGFLIDGY----------------PRDVRQGEIFEA-------EI 113 Query: 129 MP-DCTIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEK---RRQIFLDIAR 182 MP + I D+ + ++R+ R + ++ H++ + Sbjct: 114 MPCELVIFFDVSDETMIQRLLGRGQTSGRVDDNRETITKRLDTFHKQTQPVIDYY----- 168 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ + + + + + +L Sbjct: 169 KAKNKLVQIHAEGKVDDIFAEVDKALQKL 197 >gi|116201719|ref|XP_001226671.1| hypothetical protein CHGG_08744 [Chaetomium globosum CBS 148.51] gi|88177262|gb|EAQ84730.1| hypothetical protein CHGG_08744 [Chaetomium globosum CBS 148.51] Length = 1112 Score = 41.2 bits (96), Expect = 0.097, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ----RKNYDVHVTREPGGTPAAEAARHVLLSCG 58 +G + G G+GK+T + LL+R+ + + R T R + L Sbjct: 372 AGKVTAIAGPSGSGKSTIVGLLERWYEIESPDSGHKSLSWRNGSITIGGRPLREIDLKWW 431 Query: 59 VDEFGA-EAEAIVFA 72 ++ G + E +F Sbjct: 432 RNQIGLVQQEPCLFN 446 >gi|294085099|ref|YP_003551859.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Candidatus Puniceispirillum marinum IMCC1322] gi|292664674|gb|ADE39775.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Candidatus Puniceispirillum marinum IMCC1322] Length = 627 Score = 41.2 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 20/97 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I F G+ G+GK+T + L+ L + R +L Sbjct: 457 HKSKVIWFTGLSGSGKSTIANALEVELHSRG-----------------IRTYILDGDNIR 499 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 G + A R++++ V + + G +++ Sbjct: 500 HGLNNDLGFTDADRVENIRRISEVAKLMVDAGIVVIT 536 >gi|18314019|ref|NP_560686.1| signal recognition particle [Pyrobaculum aerophilum str. IM2] gi|28380154|sp|Q8ZT95|SRP54_PYRAE RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|18161596|gb|AAL64868.1| signal recognition particle (srp54 family), putative [Pyrobaculum aerophilum str. IM2] Length = 433 Score = 41.2 bits (96), Expect = 0.098, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53 G+EG+GKTT + L ++L ++ Y V + PAA + R + Sbjct: 106 GVEGSGKTTTAAKLAKYLAKRGYKVGLVETDTIRPAAFDQLRQL 149 >gi|308187361|ref|YP_003931492.1| adenylate kinase [Pantoea vagans C9-1] gi|308057871|gb|ADO10043.1| Putative adenylate kinase [Pantoea vagans C9-1] Length = 167 Score = 41.2 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 36/151 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62 + F G+ G GK+T LL L+ V + L + + Sbjct: 1 MLYIFSGLPGCGKSTIAKLLSEKLKAVYLRV------------DTIEQALRNGSAASGDI 48 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G E I++ AR L G ++ D + +L DS ++ Sbjct: 49 GPEGYFILYELAR---------DNLKLGLPVVTD------------SVNDLNLVRDSFRD 87 Query: 123 ISVQEVMPDCTI-ILDLPVDIGLKRVQNRYS 152 I++ +P I IL + RV++R S Sbjct: 88 IAISSCVPFLEIEILCSDPEQHRARVESRIS 118 >gi|297625809|ref|YP_003687572.1| Adenylate kinase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921574|emb|CBL56128.1| Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 191 Score = 41.2 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 67/217 (30%), Gaps = 45/217 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTRE------PGGTPAAEAARHVLLSCGVDEFGA 64 G GAGK T + T + GTP + ++ + F Sbjct: 7 GAPGAGKGTQAVGIATHY---GVPAISTGDMFRDNVKNGTPLGKQVDAIMKAGD---FVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123 + A RLD +P G L D F + +Q +D+L + + Sbjct: 61 DELTEQIVADRLD------QPDAQGGF--LLDGFPRTM--HQ----------VDALDDYL 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 D I LD+ + + R+ R L A + ++ + H +++ Sbjct: 101 DKHGHSLDAVISLDVDPEDLIARLLKRAELEGRAD----DNEETIRHRM--EVYTSSTAP 154 Query: 180 IARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214 + R VD + V I V V + Sbjct: 155 LLDAYKSRGLLVAVDGNGTVDEVGARIAAAVDAKVGR 191 >gi|183601510|ref|ZP_02962880.1| hypothetical protein BIFLAC_02612 [Bifidobacterium animalis subsp. lactis HN019] gi|183219116|gb|EDT89757.1| hypothetical protein BIFLAC_02612 [Bifidobacterium animalis subsp. lactis HN019] Length = 213 Score = 41.2 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 M + I EG+ +GK+T +++ L+ + +V E Sbjct: 1 MRT-RLIIVEGLPDSGKSTTAAMVAAELEARGRNVVCVEE 39 >gi|169775499|ref|XP_001822217.1| uridylate kinase [Aspergillus oryzae RIB40] gi|238495841|ref|XP_002379156.1| uridylate kinase Ura6 [Aspergillus flavus NRRL3357] gi|83770080|dbj|BAE60215.1| unnamed protein product [Aspergillus oryzae] gi|220694036|gb|EED50380.1| uridylate kinase Ura6 [Aspergillus flavus NRRL3357] Length = 215 Score = 41.2 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 65/212 (30%), Gaps = 45/212 (21%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T + L R L + RE G+ E + + + Sbjct: 23 GGPGSGKGTQSANLVRDYGFVHLSAGDLLRAEQIRE--GSQYGELIKTYIREGKIVPM-- 78 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + + A D ++N + EGK RFL G Sbjct: 79 EITVALLSNAMADALKNG--ASAGEGKKA---RFLVD-----GFPRKLDQAI------FF 122 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI--- 180 V P + T+ LD P ++ KR+ R +D E R+ F Sbjct: 123 EDTVCPSELTLFLDCPEEVMEKRLLKRGETSG---------RDDDNAESIRKRFRTFIDT 173 Query: 181 ------ARNQPDRCHIVDSAHSFQSVATNILN 206 A + ++ V + S + V I Sbjct: 174 SMPVVDAFKKQNKVVSVPATGSVEEVYALIQE 205 >gi|56418714|ref|YP_146032.1| uridine kinase [Geobacillus kaustophilus HTA426] gi|56378556|dbj|BAD74464.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 201 Score = 41.2 bits (96), Expect = 0.099, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 15/159 (9%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 GI+G +GKTT + L + L+ + V V E A+ G +E+ E Sbjct: 26 GIDGLSRSGKTTLANQLSQTLREQGISVCVFHM--DDHIVERAKRY--HTGNEEW---FE 78 Query: 68 AIVFAAARLDHVENVIRPALMEGKILL--CDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + R ++ L D D+ S + ++ + + Sbjct: 79 YYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVF-LQR 137 Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 +E P D + LD P +I R ++ ++ + Sbjct: 138 KEWRPFFDFVVYLDCPREIRFARENDQVKQNIQKFINRY 176 >gi|134096275|ref|YP_001101350.1| bifunctional 3-dehydroquinate synthase/shikimate kinase [Herminiimonas arsenicoxydans] gi|133740178|emb|CAL63229.1| bifunctional protein [Includes: 3-dehydroquinate synthase ; shikimate kinase] [Herminiimonas arsenicoxydans] Length = 554 Score = 41.2 bits (96), Expect = 0.100, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 61/201 (30%), Gaps = 52/201 (25%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G+ GAGKTT L + L ++ D ++ Sbjct: 1 MGGNIFLV--GLMGAGKTTVGRALAKRLNKQFIDS--------------------DHEIE 38 Query: 61 EFGAEAEAIVF----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A ++F A+ VIR + I+L G Sbjct: 39 ARTGAAIPLIFEIEGEASFRQREAEVIRDLTAQQDIVLAT----------GGGAVLNAEN 88 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ- 175 L+ I L V+ L+R + + D RK + + R+ Sbjct: 89 RAYLKSRGT-------VIYLRASVNNLLQRTSHDKNRPLLQTGDP--RKTLEELSRIREP 139 Query: 176 IFLDIARNQPDRCHIVDSAHS 196 ++ +IA ++D+ Sbjct: 140 LYNEIAD------IVIDTGRP 154 >gi|308270371|emb|CBX26983.1| Cytidylate kinase [uncultured Desulfobacterium sp.] Length = 227 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 6/41 (14%) Query: 1 MNSG---LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 MN L I+ +G GAGKTT +L L Y T Sbjct: 1 MNKNTKLLLITIDGPAGAGKTTVSKILAERL---GYKYIDT 38 >gi|257415688|ref|ZP_05592682.1| conserved hypothetical protein [Enterococcus faecalis AR01/DG] gi|257157516|gb|EEU87476.1| conserved hypothetical protein [Enterococcus faecalis ARO1/DG] Length = 177 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L R L+ + + + R +L DE G Sbjct: 17 KLIILRGNSGSGKTTIAKALHRCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S ++ L E + Sbjct: 66 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEMNHLFEGN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140 >gi|256085939|ref|XP_002579166.1| hypothetical protein [Schistosoma mansoni] gi|238664580|emb|CAZ35405.1| expressed protein [Schistosoma mansoni] Length = 4140 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 41/118 (34%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T +++L+ L + + P R LL + Sbjct: 1842 VVLVGPCGSGKSTVLNILRLALNKMGISIRSHIFNP-----KSMLRVQLLGQIEADTREW 1896 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ +AR V++ + + ++ D +++SL + Sbjct: 1897 TDGVLTHSARC-----VVKECIDQKCWIISD-------------GDIDPEWIESLNSV 1936 >gi|229258558|gb|ACQ45584.1| cell division protein FtsY [Ectenagena extenta gill symbiont] Length = 194 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L ++ Q + V + G T A A + + + A+ + Sbjct: 45 GVNGAGKTTLIGKLAKYFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVVAKTL- 101 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + + A + ILL D Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILLAD 127 >gi|229191154|ref|ZP_04318143.1| Uridine kinase [Bacillus cereus ATCC 10876] gi|228592304|gb|EEK50134.1| Uridine kinase [Bacillus cereus ATCC 10876] Length = 223 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 21/174 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV--------HVTREPGGTPAAEAARHVLLSCGVDEF 62 GI +GKTT + L ++++ V H R T E+AR D Sbjct: 29 GITASGKTTFANELAEKIKKRGLPVTRASIDDFHNPRVIRYTKGKESARGYY-EDAHDYT 87 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + ++ + I L+ + + A Q FL L++ Sbjct: 88 AFKERLLMPLGPNGNLQYETISHNLITDMPV----HNEPLLATQNMILIVDGTFL--LKK 141 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D I +D +I KR R E+ +E + M + Sbjct: 142 DVTHLF--DYKIFVDTDFEIARKRGAKR----ETEAFGSYEEAEKMFLNRYHAA 189 >gi|154246424|ref|YP_001417382.1| hypothetical protein Xaut_2483 [Xanthobacter autotrophicus Py2] gi|154160509|gb|ABS67725.1| protein of unknown function DUF344 [Xanthobacter autotrophicus Py2] Length = 496 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 25/46 (54%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 SGL I+FEG + AGK++ I L+R L + + VH P A Sbjct: 298 RSGLVIAFEGSDAAGKSSTIMRLRRALDPRRFRVHPIAAPTDEERA 343 >gi|322822754|gb|EFZ28723.1| dynein heavy chain, putative [Trypanosoma cruzi] Length = 3061 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+R LQR V P P R LL ++ Sbjct: 1944 VVLVGPGGSGKSTLLRVLRRALQRLGVSVPLYVMNPKAMP-----RTQLLGHMDNDTREW 1998 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AA + V++ ++CD +++SL + Sbjct: 1999 FDGVLTEAA-----KKVVKEENDVRSWIVCD-------------GDIDPEWIESLNSV 2038 >gi|109947389|ref|YP_664617.1| adenylate kinase [Helicobacter acinonychis str. Sheeba] gi|109714610|emb|CAJ99618.1| adenylate kinase [Helicobacter acinonychis str. Sheeba] Length = 191 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 79/219 (36%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + T + +A+ LL ++ Sbjct: 1 MKRLFLII--GAPGSGKTTDAELIAKN-NSATIAHFSTGDLLRAESAKKTDRGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ E I+L D + S E+ ++ L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSEKGIILIDGYPRS-----VEQMNALDKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ K + R R D +++ H + +FL Sbjct: 105 AQNEVVLKSV---------IEVEVSEKTAKERVLGRSRGADD----NEIVFHNRMH-VFL 150 Query: 179 D--IARNQ----PDRCHIVDSAHSFQSVATNILNIVWEL 211 D IA ++ S + + + + Sbjct: 151 DPLIAIQNFYKAKKVYKTINGERSIEEIVHEMQEYILSF 189 >gi|296109588|ref|YP_003616537.1| Adenylate kinase [Methanocaldococcus infernus ME] gi|295434402|gb|ADG13573.1| Adenylate kinase [Methanocaldococcus infernus ME] Length = 169 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 65/206 (31%), Gaps = 60/206 (29%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GKTT +L L + V + V + E+ E Sbjct: 3 IAITGTPGVGKTTVSKILGERL---GFKVI-----------DITDFVKKNKLYKEYVEEM 48 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ + ++ AL + ++ D + L ++ Sbjct: 49 DSFLIDF-------EKLKKALEKEDNVIFDGH------------------ISHLLDV--- 80 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-P 185 D TI+L I KR++ R + I E + LD+ + Sbjct: 81 ----DYTIVLRCDPKIIEKRLKERGYSEKK------------ILENVQAEILDVCLCESK 124 Query: 186 DRCHIVDSA-HSFQSVATNILNIVWE 210 + + +D+ + + I++ + E Sbjct: 125 GKVYEIDTTNKKPEEIVEEIISAIKE 150 >gi|241889553|ref|ZP_04776851.1| bacitracin export ATP-binding protein BceA [Gemella haemolysans ATCC 10379] gi|241863175|gb|EER67559.1| bacitracin export ATP-binding protein BceA [Gemella haemolysans ATCC 10379] Length = 247 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 32/84 (38%), Gaps = 5/84 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G FI G G+GK+T + ++ L+ + V + + + E L F Sbjct: 26 KGEFIVIMGKSGSGKSTLLKIIAGLLKLDSGKVVIDNKNITSLNNEKLAEYRLKNIGIVF 85 Query: 63 GAEAEAIVFAAARLDHVENVIRPA 86 +F A EN+I PA Sbjct: 86 QDYQLLDIFTA-----YENIIFPA 104 >gi|119947283|ref|YP_944963.1| ABC phosphonate transporter ATP-binding protein [Psychromonas ingrahamii 37] gi|119865887|gb|ABM05364.1| ABC phosphonate transporter ATP-binding protein [Psychromonas ingrahamii 37] Length = 245 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 4/89 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKR-FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + G GAGK+T + + R +L + T + T A+A H +L DE Sbjct: 38 GRLTALTGPTGAGKSTVLKGIYRTYLPTSGRIIFTTEQGQQTDLAKADEHQILELRKDEI 97 Query: 63 GAEAEAIVFAAARLDHVENVI-RPALMEG 90 G + + R E+V+ P + +G Sbjct: 98 GFVTQ-FLHTLPR-QSTEDVVAMPLIKKG 124 >gi|305672712|ref|YP_003864383.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|305410955|gb|ADM36073.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 217 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + + E P E H + + Sbjct: 12 ITVAGTVGVGKSTLTKALAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119 + F A R + G + DR + D+ A +G + S Sbjct: 63 QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKIDYKTYTS 117 Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175 L E ++ PD I L+ ++ L R++ R E Y+E +H + Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEERGREMELQTSRSYWE----EMHTRYEN 173 Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F + + + + +++ S +++ I +++ E Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDESSIENIVDQIASVIHE 213 >gi|156974500|ref|YP_001445407.1| hypothetical protein VIBHAR_02217 [Vibrio harveyi ATCC BAA-1116] gi|156526094|gb|ABU71180.1| hypothetical protein VIBHAR_02217 [Vibrio harveyi ATCC BAA-1116] Length = 129 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 21/41 (51%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 M + I G+ G+GKTT L + L+ K+++ + E Sbjct: 1 MPNAKLILIRGLPGSGKTTLAKKLSKQLKAKHFEADMYFEN 41 >gi|154331347|ref|XP_001561492.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134058809|emb|CAM36479.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 1362 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 64/209 (30%), Gaps = 52/209 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GI GKTT L L+ +T + G E R V D Sbjct: 307 GIPAVGKTTLGRELVNSLKTDGMGWAFFSGADFLTEQQGKRSVWETTRDVF-----DALS 361 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + ++ H I+ +++ +++ + L Sbjct: 362 SRLDELL----ERQHQARNIK------GLVI-------------DKNCKGIEDIYYLNA- 397 Query: 124 SVQEVMPDCTIIL--DLPVD--IGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++L D+P +GL+ + ++ DY R+ + H + Sbjct: 398 ----------LLLSKDIPFVGIVGLECADDDVLVKRMGGDDYL-REKLKFHRVIHARIVS 446 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A++ VD+ S V + +V Sbjct: 447 LAKSA-GMYRYVDATKSKDEVIQLLRTMV 474 >gi|303228530|ref|ZP_07315358.1| guanylate kinase [Veillonella atypica ACS-134-V-Col7a] gi|303232137|ref|ZP_07318840.1| guanylate kinase [Veillonella atypica ACS-049-V-Sch6] gi|302513243|gb|EFL55282.1| guanylate kinase [Veillonella atypica ACS-049-V-Sch6] gi|302516777|gb|EFL58691.1| guanylate kinase [Veillonella atypica ACS-134-V-Col7a] Length = 209 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 17/119 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G GAGK T S ++ + Y V TREP E + + E Sbjct: 4 RGLLIVISGPSGAGKGTICSNIRGEMPNLVYSVSMTTREPRVGE-KEGINYFFRTKEEFE 62 Query: 62 FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLC-----------DRFLDSSYAY 105 +A + A D+ + + L EGK +L +RF D+ + Y Sbjct: 63 SLLSEDAFLEYAKVYDNYYGTPKQHVMNLLDEGKSVLLEIDIQGAMQVKERFSDAVFIY 121 >gi|195455298|ref|XP_002074656.1| GK23049 [Drosophila willistoni] gi|194170741|gb|EDW85642.1| GK23049 [Drosophila willistoni] Length = 673 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 54 MKTGDLIAILGGSGAGKTTLLAAISQRLR 82 >gi|167919768|ref|ZP_02506859.1| adenylylsulfate kinase [Burkholderia pseudomallei BCC215] Length = 206 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRTGLCADLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|11499583|ref|NP_070825.1| hypothetical protein AF2001 [Archaeoglobus fulgidus DSM 4304] gi|3123135|sp|O28278|KAD6_ARCFU RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|2648537|gb|AAB89254.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 178 Score = 41.2 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 60/206 (29%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G GK++ + L+ + Y V E ++ E Sbjct: 1 MLIALTGTPGTGKSS----VAERLRERGYKVATVVELAEKHGC------IIDEEDGEIVI 50 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + E++ AAR+D E ++ L Sbjct: 51 DVESL---AARID-FEGIVEGHLS------------------------------------ 70 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + PD I+L + +R++ R E L+ E + + + L A Sbjct: 71 -HLLKPDVAIVLRCNPAVLRERLKGRNWSEEK-LLENLEAEMLDVI-------LVEALEH 121 Query: 185 PDRCHIVDSAH-SFQSVATNILNIVW 209 + +D+ S + V + I+ Sbjct: 122 ASEVYEIDTTEMSLEEVIEAVEAIIR 147 >gi|262038193|ref|ZP_06011587.1| guanylate kinase [Leptotrichia goodfellowii F0264] gi|261747774|gb|EEY35219.1| guanylate kinase [Leptotrichia goodfellowii F0264] Length = 181 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 23/175 (13%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G G+GK+T ++K L TR+P + L Sbjct: 2 KGKLIIVSGPSGSGKSTVTKIVKDRLNIPLSISATTRKPREGEVEGIDYYFLSEDEFKRK 61 Query: 63 GAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E +A ++ ++ + L +G ++ + QG + Sbjct: 62 ISNDEFYEYANVHGNYYGTLKKTVEENLEKGLNVILE------IDVQGALIAKDKKKDAV 115 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER--KDVMIHEK 172 L ++ I +R++ R + E E K++ K Sbjct: 116 LVFFKTKDTK------------ILEERLRGRKTDSEEVIKKRLENALKELEFENK 158 >gi|238026304|ref|YP_002910535.1| Deoxynucleoside kinase family protein [Burkholderia glumae BGR1] gi|237875498|gb|ACR27831.1| Deoxynucleoside kinase family protein [Burkholderia glumae BGR1] Length = 227 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 48/169 (28%), Gaps = 31/169 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKT+ +LL D R P P E A Sbjct: 18 RYLAIEGPIGVGKTSLATLLAERW---GMDTLFER-PQDNPFLE---RFYREGARYALPA 70 Query: 65 EAEAIVFAAARLDHVENVIRPAL-----------MEGKILLCDRFLDSSYAYQGERDSSQ 113 + + FA R + + +I +A D Sbjct: 71 Q---LAFALQRARQTGGIAAAQAAGAALVADFMPQKSEI----------FARLTLADDEW 117 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L+ + I PD + L ++ R+Q R E D + Sbjct: 118 QLYRTLAERIDAPAPAPDLVVYLQASPEVLYARIQKRGIAAELQIGDAY 166 >gi|313125653|ref|YP_004035923.1| cytidylate kinase, putative [Halogeometricum borinquense DSM 11551] gi|312292018|gb|ADQ66478.1| cytidylate kinase, putative [Halogeometricum borinquense DSM 11551] Length = 204 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 55/169 (32%), Gaps = 42/169 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI+ G G G TT L R L+ G + R + Sbjct: 16 LFITVSGPPGCGATTLCKGLSRSLEC-----------GYVSGGDIFREL----------- 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAYQGERDSSQHLFLDSLQ 121 A R + +I A +I DR LD + A Q + + L Sbjct: 54 -------AEERGMSLSQLIAKADESDEI---DRALDRRLRTVAEQWGASNKPFVLESRLA 103 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSL------RESACLDYFER 164 + D I LD P ++ ++R ++R L RE + +E Sbjct: 104 GW-LAGNRADLRIWLDAPEEVRVERTRDREELEAEMRVREVSEAGRYES 151 >gi|194755092|ref|XP_001959826.1| GF11841 [Drosophila ananassae] gi|190621124|gb|EDV36648.1| GF11841 [Drosophila ananassae] Length = 673 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 58 MKTGDLIAILGGSGAGKTTLLAAISQRLR 86 >gi|47226455|emb|CAG08471.1| unnamed protein product [Tetraodon nigroviridis] Length = 259 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 38/197 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQR-----------KNYDVHVTREPGGTP--AAEAARHV 53 +S EG GK+T LL+ +N +++P G P + + + Sbjct: 41 VSIEGNIAVGKSTFGRLLQSACPDWEVMTEPVSMWQNIGTGSSKDPHGPPQTVSNLLQMM 100 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-------KILLCDRFLDSSYAYQ 106 + + A + + + EG + + DR++ + ++ Sbjct: 101 YQDPQRWSYTFQTYACM-SRVKTQLQPPPAHLLASEGSPVQVYERSVYSDRYIFALNMFE 159 Query: 107 GERDSSQHLFL--DSL--------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 + D + ++ + I L P + L+R++ R E Sbjct: 160 LGCIGPTEWAIYQDWHSLLVEEFGHRLELEGI-----IYLRAPPETCLQRLRQRGRAEEE 214 Query: 157 A-CLDYFERKDVMIHEK 172 LDY E + HE+ Sbjct: 215 GVKLDYLETLHLQ-HER 230 >gi|327440535|dbj|BAK16900.1| ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component [Solibacillus silvestris StLB046] Length = 261 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHV 53 G FI G G+GK+T + +L R L++ + V +E + AR + Sbjct: 27 GKFIGIIGPNGSGKSTMLKILYRHLKQSSGKVTLHEQEVWDISPKKLARQM 77 >gi|294496578|ref|YP_003543071.1| ATPase, PilT family [Methanohalophilus mahii DSM 5219] gi|292667577|gb|ADE37426.1| ATPase, PilT family [Methanohalophilus mahii DSM 5219] Length = 608 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43 M G+ IS G GAGK+T + L +L + Y V P Sbjct: 264 MQRGVLIS--GPPGAGKSTFAAGLAIYLHERGYVVKTMESPRD 304 >gi|257885794|ref|ZP_05665447.1| deoxynucleoside kinase [Enterococcus faecium 1,231,501] gi|257821650|gb|EEV48780.1| deoxynucleoside kinase [Enterococcus faecium 1,231,501] Length = 219 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 46/236 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ ++ + A + V Sbjct: 4 IVLAGTIGAGKSSLTEMMAEHFDSQ-----------------AFYESIDDNEVLPLFYAN 46 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112 E A + L+ I+ A+ + +L DR + DS A + E Sbjct: 47 PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 105 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + ++E+ + + PD + + + D L+R++ R E F+ + Sbjct: 106 DELLKNMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYY 162 Query: 171 EKRRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 ++ + + + I +D + + V I + E+ Q +V+ Sbjct: 163 KELNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVA 218 >gi|154496746|ref|ZP_02035442.1| hypothetical protein BACCAP_01039 [Bacteroides capillosus ATCC 29799] gi|150273998|gb|EDN01098.1| hypothetical protein BACCAP_01039 [Bacteroides capillosus ATCC 29799] Length = 205 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 75/220 (34%), Gaps = 24/220 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ + I G G+GKTT L V+ P L+ Sbjct: 1 MNT-MVIGIAGGTGSGKTTLTRHLVESFGGNISVVYHDNYYKAHPNMTYEERAALNYDHP 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + A D + +R L GK + C + + + + + + + Sbjct: 60 D-----------AFDTDLMVEDLR-TLCAGKTIHCPVYDYTIHNRSNDTVEVKPTKVVIV 107 Query: 121 QEI------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + I +++++M D I +D D+ + R R LD + + + Sbjct: 108 EGILIFENKALRDLM-DIKIFVDTDADVRILRRILRDVKERGRSLDSVIDQYLTTVKPMH 166 Query: 175 QIFLDIARNQPDRCHIVDSAHS---FQSVATNILNIVWEL 211 + F+ +R D ++D H+ + + I + V E Sbjct: 167 EQFVQPSRQYAD-IVVLDGGHNLVALEMITQRIKSHVEEA 205 >gi|257869525|ref|ZP_05649178.1| ABC transporter [Enterococcus gallinarum EG2] gi|9294729|gb|AAF86640.1|AF162694_1 ABC transporter [Enterococcus gallinarum] gi|257803689|gb|EEV32511.1| ABC transporter [Enterococcus gallinarum EG2] Length = 269 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MNSG FI+ G GAGK+T ++ + + + V +E ++ + Sbjct: 33 MNSGDFITIIGGNGAGKSTLLNSIAGTIPTEQGKIVLGDKEITRHSVTRRSKEISRVFQD 92 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G A RL VE + A G++ R S G + + F + Sbjct: 93 PRMG--------TAVRL-TVEENLALAYKRGQV----RGFSS-----GVKGKHRAFFKEK 134 Query: 120 LQEISVQ 126 L +++ Sbjct: 135 LARLNLG 141 >gi|258542048|ref|YP_003187481.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-01] gi|256633126|dbj|BAH99101.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-01] gi|256636183|dbj|BAI02152.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-03] gi|256639238|dbj|BAI05200.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-07] gi|256642292|dbj|BAI08247.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-22] gi|256645347|dbj|BAI11295.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-26] gi|256648402|dbj|BAI14343.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-32] gi|256651455|dbj|BAI17389.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654446|dbj|BAI20373.1| adenylate kinase [Acetobacter pasteurianus IFO 3283-12] Length = 222 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 73/233 (31%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I F G GAGK T LL+ +Q D+ G+ + A+ ++ + Sbjct: 3 IIFLGPPGAGKGTQSKLLEERYGLIQISTGDMLRAEVAKGSETGKQAKALM---DAGKLV 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + I +R + + G + D F R +Q LDS+ + Sbjct: 60 PDELIIAMLKSR------IAQADCQNGF--ILDGF---------PRTLAQAEELDSM--L 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------D-----YFER 164 S D + LD+ +I R+ R++ D F+R Sbjct: 101 SSDGKKIDTVLFLDVDEEILADRISGRFTCGNCGKTYNEVSNPPKVEGVCDSCGSHEFKR 160 Query: 165 KDVMIHEKRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208 + E + + + + R H ++ S V I + + Sbjct: 161 RADDKRETVVERLKEYRKLTAPILPFYEKTGRLHKINGMLSASEVTGEIEDAL 213 >gi|91088283|ref|XP_968462.1| PREDICTED: similar to KTI12 protein, putative [Tribolium castaneum] Length = 275 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 11/91 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G+ +GKTT + LK+F + +VHV E A ++ S E Sbjct: 3 LIVVTGVPCSGKTTRSTELKQFFESHGKEVHVVSEFDQIIKANFEKNAFFSDAAAEKHIR 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + +++ + + + +++ D Sbjct: 63 S-----------LLKSEVLKLITQKNVVILD 82 >gi|325973233|ref|YP_004250297.1| iron(III) dicitrate ABC transporter ATP-binding protein [Mycoplasma suis str. Illinois] gi|323651835|gb|ADX97917.1| iron(III) dicitrate ABC transporter, ATP-binding protein [Mycoplasma suis str. Illinois] Length = 367 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV 53 +NSG FI G G+GK+T ++ L V +E AR+V Sbjct: 167 LNSGKFIVVVGSNGSGKSTIAKIIVHLLSNYEGKVLWAGKELKDISIKSFARNV 220 >gi|302671210|ref|YP_003831170.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio proteoclasticus B316] gi|302395683|gb|ADL34588.1| shikimate 5-dehydrogenase/shikimate kinase [Butyrivibrio proteoclasticus B316] Length = 510 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 68/206 (33%), Gaps = 45/206 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G+GKTT +L L + ++ T + + + G + F Sbjct: 341 IILEGFMGSGKTTVSEILADKL---DLELLDTDAAIVEAEGRSISDIFETDGEESFRDME 397 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 A++ A+ +H + ++ G + + LQE+ Sbjct: 398 TALLETAS-SEHFREM----------VIS----------LGGGLVLRKENRELLQELG-- 434 Query: 127 EVMPDCTIILDLPVDIGLKRVQ---NRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + L + +RV+ +R L+ + L + R ++A + Sbjct: 435 -----KVVYLRTKPETVYERVRYDDSRPLLKTADPLSTIRKMQSD-----RGSIYELAAD 484 Query: 184 QPDRCHIVDS-AHSFQSVATNILNIV 208 I+D+ + +A I+ + Sbjct: 485 F-----IIDTDDLTPSEIADRIIEEL 505 >gi|291243692|ref|XP_002741735.1| PREDICTED: thymidine kinase-like [Saccoglossus kowalevskii] Length = 258 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 24/163 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG G+GKTT + + V EP + +V G+ A Sbjct: 38 IVVEGNIGSGKTTFL----EYFNNMPGIQVV--EEPIDSWRNVKGHNVF---GLMYQDAT 88 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQH-------- 114 ++ F + +R L +R + S+ + R Sbjct: 89 RWSLTFQTY-VQLTMVQMRTRKQTHPTRLMERSIYSAKYCFVENLYRSGKMPDCEYAVLT 147 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + D L ++ M D + L + LKR++ R+ E+ Sbjct: 148 EWFDWLIS-NIDLKM-DLMVYLRTSPENCLKRIKERHRSEETG 188 >gi|71006610|ref|XP_757971.1| hypothetical protein UM01824.1 [Ustilago maydis 521] gi|46097472|gb|EAK82705.1| hypothetical protein UM01824.1 [Ustilago maydis 521] Length = 307 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 8/72 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--------LLS 56 LF++ +G +G+GKTT L + L+ V V E R V LLS Sbjct: 41 LFVAMQGPQGSGKTTVTRSLVQHLESIGLTVGVLSTDDLYHTHENLRRVAEESAANPLLS 100 Query: 57 CGVDEFGAEAEA 68 + E Sbjct: 101 GRGQPGTHDIEL 112 >gi|323344278|ref|ZP_08084504.1| hypothetical protein HMPREF0663_11040 [Prevotella oralis ATCC 33269] gi|323095007|gb|EFZ37582.1| hypothetical protein HMPREF0663_11040 [Prevotella oralis ATCC 33269] Length = 393 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 8/100 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ I G AGKTT + + + V E + ++ + G Sbjct: 31 MNNIKKIVLTGGPCAGKTTALVKVIEHFSSLGFKVFTIPEVPTLFSQSGMDYLTTNKGFF 90 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGK---ILLCDR 97 G +A + A +E+ E K I++CDR Sbjct: 91 YEGEKATLEIQMA-----LEDKFMRMASECKEPTIIVCDR 125 >gi|257878886|ref|ZP_05658539.1| deoxynucleoside kinase [Enterococcus faecium 1,230,933] gi|257881522|ref|ZP_05661175.1| deoxynucleoside kinase [Enterococcus faecium 1,231,502] gi|257890744|ref|ZP_05670397.1| deoxynucleoside kinase [Enterococcus faecium 1,231,410] gi|258615042|ref|ZP_05712812.1| deoxynucleoside kinase [Enterococcus faecium DO] gi|293556926|ref|ZP_06675487.1| deoxyguanosIne kinase [Enterococcus faecium E1039] gi|293560307|ref|ZP_06676804.1| deoxyguanosIne kinase [Enterococcus faecium E1162] gi|293567759|ref|ZP_06679100.1| deoxyguanosine kinase [Enterococcus faecium E1071] gi|294620920|ref|ZP_06700121.1| deoxyguanosIne kinase [Enterococcus faecium U0317] gi|314938979|ref|ZP_07846244.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04] gi|314943470|ref|ZP_07850237.1| deoxynucleoside kinase [Enterococcus faecium TX0133C] gi|314948237|ref|ZP_07851631.1| deoxynucleoside kinase [Enterococcus faecium TX0082] gi|314951597|ref|ZP_07854643.1| deoxynucleoside kinase [Enterococcus faecium TX0133A] gi|314991540|ref|ZP_07857016.1| deoxynucleoside kinase [Enterococcus faecium TX0133B] gi|314994873|ref|ZP_07860000.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01] gi|257813114|gb|EEV41872.1| deoxynucleoside kinase [Enterococcus faecium 1,230,933] gi|257817180|gb|EEV44508.1| deoxynucleoside kinase [Enterococcus faecium 1,231,502] gi|257827104|gb|EEV53730.1| deoxynucleoside kinase [Enterococcus faecium 1,231,410] gi|291589344|gb|EFF21151.1| deoxyguanosine kinase [Enterococcus faecium E1071] gi|291599531|gb|EFF30547.1| deoxyguanosIne kinase [Enterococcus faecium U0317] gi|291601010|gb|EFF31301.1| deoxyguanosIne kinase [Enterococcus faecium E1039] gi|291605757|gb|EFF35194.1| deoxyguanosIne kinase [Enterococcus faecium E1162] gi|313590855|gb|EFR69700.1| deoxynucleoside kinase [Enterococcus faecium TX0133a01] gi|313593824|gb|EFR72669.1| deoxynucleoside kinase [Enterococcus faecium TX0133B] gi|313596291|gb|EFR75136.1| deoxynucleoside kinase [Enterococcus faecium TX0133A] gi|313597842|gb|EFR76687.1| deoxynucleoside kinase [Enterococcus faecium TX0133C] gi|313641688|gb|EFS06268.1| deoxynucleoside kinase [Enterococcus faecium TX0133a04] gi|313645370|gb|EFS09950.1| deoxynucleoside kinase [Enterococcus faecium TX0082] Length = 219 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 46/236 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I G GAGK++ ++ + A + V Sbjct: 4 IVLAGTIGAGKSSLTEMMAEHFDSQ-----------------AFYESIDDNEVLPLFYAN 46 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSS 112 E A + L+ I+ A+ + +L DR + DS A + E Sbjct: 47 PEQYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVY 105 Query: 113 QHLFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + ++E+ + + PD + + + D L+R++ R E F+ + Sbjct: 106 DELLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYY 162 Query: 171 EKRRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 ++ + + + I +D + + V I + E+ Q +V+ Sbjct: 163 KELNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVA 218 >gi|87199291|ref|YP_496548.1| adenylate kinase [Novosphingobium aromaticivorans DSM 12444] gi|123489944|sp|Q2G8V9|KAD_NOVAD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|87134972|gb|ABD25714.1| Adenylate kinase [Novosphingobium aromaticivorans DSM 12444] Length = 216 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 49/236 (20%), Positives = 74/236 (31%), Gaps = 59/236 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T L R T + R + G +A Sbjct: 3 IILLGPPGAGKGTQAQRLVE---RHGMKQLST--------GDMLRAAVK--AETPVGLKA 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE------RDSSQHLFLDSL 120 +A++ A V + I AL + D LD+ A QG R + Q LD++ Sbjct: 50 KAVMEA---GQLVSDEIVSAL------IGDE-LDAMPAGQGAIFDGYPRTAPQAESLDAI 99 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER----------KDVM 168 + + D I LD+ D ++R+ RY+ D FE+ Sbjct: 100 --LESRGRKLDHVIELDVNEDALVERITGRYTCATCGKGYHDKFEKPAVEGTCDKCGGHE 157 Query: 169 IHEK-------RRQIFLD-IARNQP------DRCHI--VDSAHSFQSVATNILNIV 208 + R + A+ P R + VD V I I+ Sbjct: 158 FKRRPDDNEETVRTRMAEYRAKTAPILPIYESRGIVSRVDGMADMDDVTAAIEAIL 213 >gi|73544471|ref|XP_848130.1| dynein heavy chain [Leishmania major strain Friedlin] gi|321438483|emb|CBZ12242.1| putative dynein heavy chain [Leishmania major strain Friedlin] Length = 4454 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 26/119 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G+GK+T +++L++ LQ +V + P A R +L G + Sbjct: 2121 VVLVGPSGSGKSTLLNILRKALQTMQIEVPMHVM---NPKAMTRRRLL---GYMDADTRE 2174 Query: 67 EA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ AAR +V++ +LCD +++SL + Sbjct: 2175 WYDGVLTVAAR-----DVVKQPKEARPWVLCD-------------GDIDPEWIESLNSV 2215 >gi|325989675|ref|YP_004249374.1| ferrichrome ABC transporter ATP-binding [Mycoplasma suis KI3806] gi|323574760|emb|CBZ40416.1| ferrichrome ABC transporter, ATP-binding [Mycoplasma suis] Length = 367 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHV 53 +NSG FI G G+GK+T ++ L V +E AR+V Sbjct: 167 LNSGKFIVVVGSNGSGKSTIAKIIVHLLSNYEGKVLWAGKELKDISIKSFARNV 220 >gi|238028038|ref|YP_002912269.1| adenylylsulfate kinase [Burkholderia glumae BGR1] gi|237877232|gb|ACR29565.1| Adenylylsulfate kinase [Burkholderia glumae BGR1] Length = 173 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 66/212 (31%), Gaps = 56/212 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T L L+ + R ++L G ++ Sbjct: 6 GLPGAGKSTIAKALHEALKARG-----------------VRTIILDGDTLRGGLCSDLGF 48 Query: 71 FAAARLDHVENVIRPAL---MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 AA R +++ A E +++ + + Q RD ++ + + E + Sbjct: 49 SAADRNENIRRFAHVAALFRQESYVVI----VATISPLQAHRDLARGIVGEGFVETFIAT 104 Query: 128 VMPDCTIILDL----PVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 LD+ + + + D +E+ Sbjct: 105 P-------LDICRERDPKGMYAKAMQGKLAQFTGVSDTYEQPGAAD-------------- 143 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 VD++ + VA ++ I +L ++R Sbjct: 144 -----VTVDTSQ--EEVAASVERIAGQLRRQR 168 >gi|182420523|ref|ZP_02643397.2| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens NCTC 8239] gi|182380180|gb|EDT77659.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens NCTC 8239] Length = 228 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 17 KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74 K+T +++L + EP + +L + + + F Sbjct: 37 KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 83 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127 R H++ L+E + DR + + + ++ L+ + Sbjct: 84 RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 138 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186 P + L++ VD +KR+Q R E ER+ EK + + N Sbjct: 139 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 191 Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223 ++ F++V + V L+ K++S L + K Sbjct: 192 PILRINVDELDFENVPED-REYVLNLIDKKLSKLENNK 228 >gi|196043179|ref|ZP_03110417.1| hypothetical protein BC03BB108_2483 [Bacillus cereus 03BB108] gi|225864535|ref|YP_002749913.1| hypothetical protein BCA_2640 [Bacillus cereus 03BB102] gi|229184783|ref|ZP_04311976.1| uridine kinase [Bacillus cereus BGSC 6E1] gi|196025488|gb|EDX64157.1| hypothetical protein BC03BB108_2483 [Bacillus cereus 03BB108] gi|225788178|gb|ACO28395.1| hypothetical protein BCA_2640 [Bacillus cereus 03BB102] gi|228598687|gb|EEK56314.1| uridine kinase [Bacillus cereus BGSC 6E1] Length = 186 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 72/220 (32%), Gaps = 55/220 (25%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56 MN I+ + G GKTT L + L + +D + + T + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTENLTQKLTNSKALYFDSYHFKN-CPTDICKWI------ 53 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + + + H+ I A ++ I+ D +AY Sbjct: 54 --DEGANYDEWVLTPLIHDIQHL---IGEANVDYIIV------DYPFAY------LNSEM 96 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR--- 173 + + D TI +D P+DI + R R D+ E IH Sbjct: 97 REFI----------DVTIFIDTPLDIAMARRILR---------DFKEDTIDEIHNDLKHY 137 Query: 174 ----RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208 R+ +L+ +P+ I+D + S + + + + Sbjct: 138 MTFARKAYLEAIHTVKPNSDIILDGSLSVSEIMNHAVEEL 177 >gi|325680323|ref|ZP_08159883.1| guanylate kinase [Ruminococcus albus 8] gi|324108032|gb|EGC02288.1| guanylate kinase [Ruminococcus albus 8] Length = 215 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 79/225 (35%), Gaps = 36/225 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G GK T + + + TR P A + L ++ A Sbjct: 9 KLIIVSAPSGCGKGTIMHKVFNDDEVFYSVSCTTRPPRPEDIAGVTYNFLTVGEFEKMIA 68 Query: 65 EAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E + A ++ I+P L GK ++ + ++++ A+Q Sbjct: 69 EDGFLEHAFYSGNYYGTPIKPVEDNLAAGKDVILE--IETNGAFQ--------------- 111 Query: 122 EISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL- 178 V+E+ PD + + LP + +R+ R + E + I + R ++ Sbjct: 112 ---VKELRPDASSLFILPPSVAELDRRLHKRATEDEETIQKRVAQAAGEIEKSDRYDYVI 168 Query: 179 ---DIARNQPDRCHIVDSAHSFQSVA-------TNILNIVWELVQ 213 D+ + D C ++D + A +I ++ E+++ Sbjct: 169 MNDDLDKAVEDFCAVIDGIRGVKEAAVRFSPENEDIKKMIREVLE 213 >gi|239830910|ref|ZP_04679239.1| Pantothenate kinase [Ochrobactrum intermedium LMG 3301] gi|239823177|gb|EEQ94745.1| Pantothenate kinase [Ochrobactrum intermedium LMG 3301] Length = 213 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 21/159 (13%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVD 60 G I G GAGK+T L + + + V + A R LLS Sbjct: 22 GRLIVAVAGPPGAGKSTMSDYLLHAINKGGDAPSIVVPMDGFHLDDAILDRRGLLSRKG- 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC--DRFLDSSYAYQGERDSSQHLFLD 118 A L ++ +G++ + DR L+ S A + L Sbjct: 81 --SPPTFDCAGFAVLLQRLKQ------ADGEVFIPVFDRSLELSRAAASVVGPEHRVLLV 132 Query: 119 SLQEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + + P D T+ LD+P D +R+ +R Sbjct: 133 EGNYLLLDQQPWAQLAPFFDLTVYLDVPFDELERRLTDR 171 >gi|195489185|ref|XP_002092630.1| GE11560 [Drosophila yakuba] gi|194178731|gb|EDW92342.1| GE11560 [Drosophila yakuba] Length = 678 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 59 MKTGDLIAILGGSGAGKTTLLAAISQRLR 87 >gi|182413680|ref|YP_001818746.1| adenylate kinase [Opitutus terrae PB90-1] gi|177840894|gb|ACB75146.1| adenylate kinase [Opitutus terrae PB90-1] Length = 389 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 41/221 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK T L + + R + G + G EA Sbjct: 4 IALFGPPGAGKGTQSEFLIKR-----------YNLFYISTGDLLRKEM--AGKTKLGLEA 50 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++I+ A V + I ++E I D++ +Q ++ Sbjct: 51 QSIIAAGG---LVSDEIIVQIIEKTI------TDNT---GCNGFLFDGFPRTYIQAYILE 98 Query: 127 EVMPDC------TIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQ 175 +M I L +P + ++R+ R S R + ++K Q Sbjct: 99 GLMLKLHTSLSCLISLKVPEEESVRRLLKRGATSGRSDDNESVIRNRLREYNQKTLPVLQ 158 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + C VD S V I +V + KR+ Sbjct: 159 FY-----RDKGICTEVDGTRSIDEVTAQITELVSAELSKRL 194 >gi|225437290|ref|XP_002262984.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297743850|emb|CBI36820.3| unnamed protein product [Vitis vinifera] Length = 233 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 28/219 (12%), Positives = 69/219 (31%), Gaps = 46/219 (21%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVH---------VTREPGGTP--AAEAARHVLLS 56 G+ G +GK+T +L + V + + GG A +LL Sbjct: 5 GLTGGIASGKSTVSNL----FKVHGIPVVDADLVARDVLKKGSGGWRKVVAAFGNEILLD 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 G + + + + + ++ P + G ++ + + Sbjct: 61 NGEVDRAKLGQIVFSDPGKRQLLNRLLAPFISSGIF---------WEVFKLWMKGFKVIV 111 Query: 117 LDS--LQEISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-RKDVMIHEK 172 LD L E + P + + + L+R+ R E + + + Sbjct: 112 LDVPLLFEAKMDGWTKPIIVVW--VDPETQLQRLLARDRASEEDARNRINAQMSLD---- 165 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 L ++ ++D+ S + + N+++++ Sbjct: 166 -----LKRSKAD----IVIDNTGSLEDLNEQFQNVLFQV 195 >gi|116249496|ref|YP_765334.1| hypothetical protein pRL90039 [Rhizobium leguminosarum bv. viciae 3841] gi|115254144|emb|CAK03748.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 528 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 72/210 (34%), Gaps = 34/210 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G ++ G+ G+GKTT +L + G P A + + Sbjct: 339 GRLVAVGGLSGSGKTTLAEVLAPRI-------------GLAPGARIIESDRIRKAMHGVP 385 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AE + AA R + V + + +++L + S+ A + + + ++E Sbjct: 386 AETR-LPQAAYRPEVSAKVYQEMVWRARLILAEG--GSAVA---DAVFDKPVNRRMIEEA 439 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + P L+ + +RV R A +D ++ H+ +A Sbjct: 440 AEEGHHPFSAFWLEADPALLWQRVAARVGSPSDATVD------ILAHQ--------LAHE 485 Query: 184 QPDR-CHIVDSAHSFQSVATNILNIVWELV 212 +D+ +A I+ + E V Sbjct: 486 TGAVAWPRLDATQRAARLADEIMRRIEEKV 515 >gi|300712048|ref|YP_003737862.1| ATPase [Halalkalicoccus jeotgali B3] gi|299125731|gb|ADJ16070.1| ATPase [Halalkalicoccus jeotgali B3] Length = 616 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 2/49 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 G+ IS G GAGK+T + FL Y V +P Sbjct: 263 QRGILIS--GSPGAGKSTFAQAVAEFLNDSGYSVKTMEKPRDLQVGPEI 309 >gi|257887847|ref|ZP_05667500.1| deoxynucleoside kinase [Enterococcus faecium 1,141,733] gi|257896535|ref|ZP_05676188.1| deoxynucleoside kinase [Enterococcus faecium Com12] gi|257823901|gb|EEV50833.1| deoxynucleoside kinase [Enterococcus faecium 1,141,733] gi|257833100|gb|EEV59521.1| deoxynucleoside kinase [Enterococcus faecium Com12] Length = 217 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 80/231 (34%), Gaps = 36/231 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++ + Y+ E A E Sbjct: 2 IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114 A + L+ I+ A+ + +L DR + DS A + E Sbjct: 47 QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVMIHE 171 L + ++E+ + + PD + + + D L+R++ R E D ++ Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLSFDPSLYDYYKELNR 165 Query: 172 KRRQIFLDI-----ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + Q + + + DR + V+ + + + V I + E+ Q ++ Sbjct: 166 RYDQWYEEYKESPKIQIDGDRYNFVEDSQAKEEVLKMIEEKLAEIRQTELA 216 >gi|226357367|ref|YP_002787107.1| guanylate kinase [Deinococcus deserti VCD115] Length = 242 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 46/212 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTRE--PGGTPAAEAARHVLLSC 57 GL I G G GK T L +L+ ++ TRE PG + + + Sbjct: 21 RGLLIVMTGASGVGKGTLREL---WLRDQDVFYSTSWTTREARPGEVDGVDYI--FVSAD 75 Query: 58 GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 ++ + + A+ +H I AL G+ ++ + ++ A Q Sbjct: 76 AFEQKVQQGGFLEHASFVGNHYGTPVEPIEAALSRGQDVILE--IEVEGAMQVRDRMGDE 133 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 I +P L ++ R R + + E++ + R Sbjct: 134 AI---------------LVFI--MPP--SLTELRRRLEGRATETPERIEKR----LARAR 170 Query: 175 QIFLDIARNQPDRCHIVD-----SAHSFQSVA 201 + +I R IV+ + ++V Sbjct: 171 E---EIMHAHAFRYVIVNDDLNRAVQELEAVQ 199 >gi|297379817|gb|ADI34704.1| Adenylate kinase isoenzyme 1 [Helicobacter pylori v225d] Length = 200 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V++ + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEHILSF 189 >gi|260558445|ref|ZP_05830641.1| deoxynucleoside kinase [Enterococcus faecium C68] gi|260075619|gb|EEW63925.1| deoxynucleoside kinase [Enterococcus faecium C68] Length = 217 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 38/234 (16%), Positives = 78/234 (33%), Gaps = 42/234 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++ + Y+ E A E Sbjct: 2 IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114 A + L+ I+ A+ + +L DR + DS A + E Sbjct: 47 QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + ++E+ + + PD + + + D L+R++ R E F+ +++ Sbjct: 106 LLKNMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162 Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 + + + I +D + + V I + E+ Q +V+ Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVA 216 >gi|254718281|ref|ZP_05180092.1| putative fructose transport system kinase [Brucella sp. 83/13] Length = 232 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 41 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLELSRAAASVVRPEHRILLVEG 153 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190 >gi|150400486|ref|YP_001324252.1| signal recognition particle-docking protein FtsY [Methanococcus aeolicus Nankai-3] gi|150013189|gb|ABR55640.1| signal recognition particle-docking protein FtsY [Methanococcus aeolicus Nankai-3] Length = 383 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I GI G GKTT IS L L Y V + G T A A L GA+ Sbjct: 173 IVVVGINGTGKTTTISKLAYKLMNNGYSVVLAA--GDTFRAGAIEQ--LEEHAKNIGAKV 228 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + I A G ++L D R ++ + ++++ Sbjct: 229 IKHQKGSDGAAVIYDAINHAKARGISVVLAD---------TAGRQTTNINLMAEIKKVVR 279 Query: 126 QEVMPDCTII 135 PD + Sbjct: 280 VS-NPDLVVF 288 >gi|326434839|gb|EGD80409.1| hypothetical protein PTSG_11054 [Salpingoeca sp. ATCC 50818] Length = 211 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 20/102 (19%) Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--------------LDYFERKDVMIHEK 172 +P + LD P + L R+ R + + LD ++ H+ Sbjct: 103 GFVPGLAVFLDAPAQVCLDRLTLRRTDPITGKRYHLATNPPPSQDVLDRLKQHPDDEHDV 162 Query: 173 RR------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 Q FL ++ + +DSA V ++ + + Sbjct: 163 VHRRMMDAQAFLKELKDFYKKGVTIDSARPIGDVLASVESHL 204 >gi|317051779|ref|YP_004112895.1| ABC transporter-like protein [Desulfurispirillum indicum S5] gi|316946863|gb|ADU66339.1| ABC transporter related protein [Desulfurispirillum indicum S5] Length = 265 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 65/212 (30%), Gaps = 33/212 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-----LL 55 ++ G +S G G GK+T + LL+ L+ + V G P A R + ++ Sbjct: 24 ISQGEIVSILGPNGCGKSTLLKLLRGVLKPQQGTV---SWQGQPPHAIKRREMACRCAVV 80 Query: 56 SCGVDEFGAEAEAIVFAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAY 105 S + + AR + I AL I+ S Sbjct: 81 SQSEQPLFGYTVEEMVSMARFARLGLTGTMGASDRQAIEEALQATDIV---HLRHKSIMR 137 Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + + +L + + ++LD + + + L + R+ Sbjct: 138 ISGGERQRVYLARALAQQAT-------VLLLD----EATSSLDLDHRWDTARLLQHMNRQ 186 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF 197 + LD+A R ++++ Sbjct: 187 QSTTIVQVSHD-LDLAAATSHRIILLNATGQI 217 >gi|265983242|ref|ZP_06095977.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306838893|ref|ZP_07471721.1| fructose transport system kinase [Brucella sp. NF 2653] gi|264661834|gb|EEZ32095.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306406009|gb|EFM62260.1| fructose transport system kinase [Brucella sp. NF 2653] Length = 218 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 27 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 87 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLELSRAAASVVRPEHRILLVEG 139 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176 >gi|188527534|ref|YP_001910221.1| adenylate kinase [Helicobacter pylori Shi470] gi|238691925|sp|B2UTK9|KAD_HELPS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|188143774|gb|ACD48191.1| adenylate kinase [Helicobacter pylori Shi470] Length = 191 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V++ + R R D +++ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEMVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189 >gi|115533312|ref|NP_001041178.1| hypothetical protein W08A12.1 [Caenorhabditis elegans] gi|310774946|gb|ADP21891.1| Hypothetical protein W08A12.1d [Caenorhabditis elegans] Length = 485 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L F + + V E + L Sbjct: 92 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 150 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ ++++ N +++CDR AY D + L L Sbjct: 151 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 203 >gi|25148997|ref|NP_504030.2| hypothetical protein W08A12.1 [Caenorhabditis elegans] gi|18250263|gb|AAL65797.1|U97010_1 Hypothetical protein W08A12.1a [Caenorhabditis elegans] Length = 501 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L F + + V E + L Sbjct: 108 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 166 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ ++++ N +++CDR AY D + L L Sbjct: 167 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 219 >gi|17565178|ref|NP_504029.1| hypothetical protein W08A12.1 [Caenorhabditis elegans] gi|14916384|gb|AAK73903.1|U97010_2 Hypothetical protein W08A12.1b [Caenorhabditis elegans] Length = 444 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L F + + V E + L Sbjct: 51 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 109 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ ++++ N +++CDR AY D + L L Sbjct: 110 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 162 >gi|25149005|ref|NP_741519.1| hypothetical protein W08A12.1 [Caenorhabditis elegans] gi|18250264|gb|AAL65798.1|U97010_3 Hypothetical protein W08A12.1c [Caenorhabditis elegans] Length = 438 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 5/116 (4%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L F + + V E + L Sbjct: 45 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDTEQSYIFQR- 103 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ ++++ N +++CDR AY D + L L Sbjct: 104 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSPEDWQR--MLKDLN 156 >gi|402298|gb|AAC37214.1| brown protein [Drosophila melanogaster] gi|745455|prf||2016284A brown gene Length = 675 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84 >gi|57168971|ref|ZP_00368100.1| adenylylsulfate kinase [Campylobacter coli RM2228] gi|57019637|gb|EAL56326.1| adenylylsulfate kinase [Campylobacter coli RM2228] Length = 193 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 38/143 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + +++ L + + + LL G ++ Sbjct: 30 FTGLSGSGKSTLANAVEKKLFEQGFHTY-----------------LLDGDNVRHGLNSDL 72 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A+R++++ + + + G I+LC A+ + + L D L+E Sbjct: 73 GFDEASRVENIRRIGELCKLFMDAGMIVLC--------AFISPFEKDRKLVKDLLEE--- 121 Query: 126 QEVMPD--CTIILDLPVDIGLKR 146 D I +D +++ KR Sbjct: 122 -----DEYIEIFVDTSLEVCEKR 139 >gi|95928720|ref|ZP_01311466.1| Uncharacterised P-loop ATPase protein UPF0042 [Desulfuromonas acetoxidans DSM 684] gi|95135065|gb|EAT16718.1| Uncharacterised P-loop ATPase protein UPF0042 [Desulfuromonas acetoxidans DSM 684] Length = 287 Score = 41.2 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 45/136 (33%), Gaps = 19/136 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------VTREPGGTPAAEAARHVL 54 FI G+ G+GK+T + L+ + + V + GG ++ Sbjct: 2 RFIVITGLSGSGKSTAAKV----LEDEGFYVIDNFPLTLLPTFFEQGGGNVVDSVGVAIV 57 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL--LCD---RFLDSSYAYQGER 109 + F E I A + H + + +++ R S+Y+ Sbjct: 58 MDVRNPHFVTGYEQIFAAVRQAGHEPEIFFFDAADDELIRRFSTTRRRHPLSNYSTVSAA 117 Query: 110 DSSQHLFLDSLQEISV 125 + L L++I+ Sbjct: 118 ICQERSLLQPLRDIAT 133 >gi|312139572|ref|YP_004006908.1| guanylate kinase gmk [Rhodococcus equi 103S] gi|311888911|emb|CBH48224.1| guanylate kinase GmK [Rhodococcus equi 103S] Length = 188 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 6/100 (6%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G + G GK++ + LL+ + V TR+P H + Sbjct: 1 MRRGRLVVLAGPSAVGKSSVVRLLRERFPEVVFSVSATTRDPRPGEVDGQDYHFVTRDEF 60 Query: 60 DEFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILL 94 D A + + +A R +R AL EGK +L Sbjct: 61 DRMIAAGDLLEWAEIHGGLQRSGTPAEPVRRALSEGKPVL 100 >gi|237813093|ref|YP_002897544.1| adenylyl-sulfate kinase [Burkholderia pseudomallei MSHR346] gi|237505307|gb|ACQ97625.1| adenylyl-sulfate kinase [Burkholderia pseudomallei MSHR346] Length = 206 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRTGLCADLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|145349676|ref|XP_001419254.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579485|gb|ABO97547.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 229 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 34/242 (14%), Positives = 65/242 (26%), Gaps = 76/242 (31%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +GK T ++ + A + R + + A+ Sbjct: 27 IVIAGAPASGKGTQCEMIVKKF-----------GLTHISAGDLLRAAVAAGTDAGKKAKE 75 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLC---DRFLDSSYAYQGERDSSQHLFLDSLQEI 123 R D V N ++++ DR A D + + + Sbjct: 76 -----YMDRGDLVPN---------EVVVTMVKDRLAQPDCAKGWLLDGYPRSE-EQAEAL 120 Query: 124 SVQEVMPDCTIILDLP------------------------------VDIGLKRVQNRYSL 153 + PD ++LD+P +I R+ R Sbjct: 121 IESGIDPDLFLLLDVPDEILIDRVVGRRLDPVDGTIYHMTFFPPPTPEIA-ARLTQRSDD 179 Query: 154 RESACLDYFERKDVMIHEKRRQI----FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 E + + +H K + I +N VD + Q V +I ++ Sbjct: 180 TEEKAANR-----LAVHHKNVDAVVGKYESIMKN-------VDGNRAKQDVFKDIERLIK 227 Query: 210 EL 211 + Sbjct: 228 AM 229 >gi|55742547|ref|NP_001007057.1| deoxycytidine kinase [Danio rerio] gi|54035394|gb|AAH83277.1| Deoxycytidine kinase [Danio rerio] gi|182891024|gb|AAI64599.1| Dck protein [Danio rerio] Length = 263 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 40/191 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------AAEAARH 52 IS EG AGK+T + LL+ + ++V EP ++ + Sbjct: 24 ISIEGNIAAGKSTFVRLLEEH--DREWEVVP--EPIARWCNVQTQHDDHEELTTSQKSGG 79 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI-------------LLCDRFL 99 +L ++ A A + + I+ GK+ + DR++ Sbjct: 80 NVLQMMYEKPERWAYTFQSYACMS-RIRSQIKS--TNGKLREAENPVQFFERSVYSDRYI 136 Query: 100 DSSYAYQGERDSSQHLFL-----DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 +S Y+ E + + L + + + D I L + L+R+ R Sbjct: 137 FASNLYESECVNETEWAIYQDWHSWLHKQFGKHIELDGIIYLRAKPERCLERLHLRGREE 196 Query: 155 ESA-CLDYFER 164 E L+Y E+ Sbjct: 197 EQGIPLEYLEK 207 >gi|50237513|gb|AAT71846.1| deoxyribonucleoside kinase [Rock bream iridovirus] gi|62421223|gb|AAX82343.1| deoxyribonucleoside kinase [Orange-spotted grouper iridovirus] Length = 210 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 61/202 (30%), Gaps = 30/202 (14%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GK++ + L +V + EP T + A A Sbjct: 31 GVGKSSLLRSLAN--THHGINVVL--EPTDTW------EPFFQLYCKDPARWAAAFQMM- 79 Query: 74 ARLDHVENVIRPALMEGKI-LLCDRF---LDSSYAYQGERDSSQHLFLDSLQ-EISVQEV 128 + H I A + + + +R + A+ + D++ ++ Sbjct: 80 --VIHSYRNIYSANKDNPLPTIIERSPQCCRAFVAWLYATGQLDTVSHDTINTHLAAVPW 137 Query: 129 MPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 + T + L + R R + S DY K+ + AR PD Sbjct: 138 FSNVTQVYLRCSPTVAAARALARPNELNSCPPDYM-----AFLHKQWE-----ARVTPDT 187 Query: 188 CHIVDSAHSFQSVATNILNIVW 209 I+D+ +V + ++ Sbjct: 188 I-IIDAEQDMDTVRRQFIELLH 208 >gi|167825043|ref|ZP_02456514.1| adenylylsulfate kinase [Burkholderia pseudomallei 9] gi|167911766|ref|ZP_02498857.1| adenylylsulfate kinase [Burkholderia pseudomallei 112] gi|226199908|ref|ZP_03795458.1| adenylyl-sulfate kinase [Burkholderia pseudomallei Pakistan 9] gi|254191332|ref|ZP_04897836.1| adenylylsulfate kinase [Burkholderia pseudomallei Pasteur 52237] gi|157939004|gb|EDO94674.1| adenylylsulfate kinase [Burkholderia pseudomallei Pasteur 52237] gi|225927964|gb|EEH24001.1| adenylyl-sulfate kinase [Burkholderia pseudomallei Pakistan 9] Length = 206 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|291446616|ref|ZP_06586006.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291349563|gb|EFE76467.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length = 318 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 I+F G++G GK+T L+R L ++ V Sbjct: 19 IAFLGMDGVGKSTLAQELERRLTQRGRPV 47 >gi|281203063|gb|EFA77264.1| adenylate kinase [Polysphondylium pallidum PN500] Length = 302 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 28/155 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ G G+GK T + L+ + T + R S E G + Sbjct: 43 VAIVGAPGSGKGTQSAKLE---RDYGLKPIST--------GQILRQA--SQEDSELGKDI 89 Query: 67 EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ + A L + + V++ L + L D + ++ Q D L + Sbjct: 90 KSKLDAGQLLSDEFMFKVVKEYLSKINTYLLDGYPRTT---QQAED---------LDKWL 137 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESAC 158 + P D + LD+P ++ ++R+Q+R+ S Sbjct: 138 ADKQTPLDFVLYLDVPEEVLIERIQDRWIHPSSGR 172 >gi|218675476|ref|ZP_03525145.1| hypothetical protein RetlG_30981 [Rhizobium etli GR56] Length = 169 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 69/201 (34%), Gaps = 41/201 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G GKT+ + L+R+ + V VL G E G E Sbjct: 8 IEGSSGTGKTS----VATELERRGFHVVH------------GDRVLAYVGDPETGVALEG 51 Query: 69 IVFAAARL-DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R+ + + I P + + + + D + + H FLD Sbjct: 52 PPQGVDRVVWNYAHWIWP-VEKVRAITAD--TTHPATFFCGGSRNFHKFLDVF------- 101 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 D +LD+ V+ +R+ R D ER V+ H + +++ P Sbjct: 102 ---DKVFVLDIDVETLNRRLDGRPD-EPGFAPD--ERAVVLRHHRS-------SKHFPAG 148 Query: 188 CHIVDSAHSFQSVATNILNIV 208 +D+ + SV +IL + Sbjct: 149 IG-IDTTGTIPSVVDDILAQL 168 >gi|328868080|gb|EGG16460.1| hypothetical protein DFA_08998 [Dictyostelium fasciculatum] Length = 272 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 40/140 (28%), Gaps = 29/140 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G +GKTT + + + V + E L++ + Sbjct: 3 LIVMSGPPSSGKTTRANDIAKHFLEMGKKVIIINEESC----------LINKNQGYKDSV 52 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGERDSSQ---H 114 +E ++ + +L + +++ D R+ A Sbjct: 53 SE-----KMTRGTLKAAVERSLAKDTVVISDSLNYIKGYRYELYCIARAAGTRLLLVYCD 107 Query: 115 LFLDSLQEISVQEVMPDCTI 134 D ++ + + D TI Sbjct: 108 TPRDQAKQWNTER---DATI 124 >gi|313624077|gb|EFR94159.1| conserved hypothetical protein [Listeria innocua FSL J1-023] Length = 176 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 70/213 (32%) Query: 14 GAGKTTHISLLKRFLQRKNYD---VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+GKTT + ++LQ ++ + RE +++ + LL+ Sbjct: 10 GSGKTTLAKKVSKWLQIDFFETDRIVWKREETEVRRSDSEKAALLNT------------- 56 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 L ++ E + +S+ + Sbjct: 57 ---------------ILQNDNWII-------------EGVHLEAWTEESISQA------- 81 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK---------------DVMIHEKRRQ 175 D I LDLP K+++++ R+ L E+ D + ++ + Sbjct: 82 DIIIYLDLP----KKQIRSQLIKRQFKQLLRIEKAHYVVRFSMLKKMFYWDDLFDQRTKP 137 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + P + I+ FQ + IL I+ Sbjct: 138 LVNEKIKQHPAKWLIIKENMPFQKIQQKILQII 170 >gi|288931478|ref|YP_003435538.1| adenylate kinase [Ferroglobus placidus DSM 10642] gi|288893726|gb|ADC65263.1| adenylate kinase [Ferroglobus placidus DSM 10642] Length = 218 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 37/238 (15%), Positives = 72/238 (30%), Gaps = 66/238 (27%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T ++ + T + R + E G +A+ + Sbjct: 7 GPPGAGKGTQAKMIVE---KYGIPQIST--------GDILREAV--AKGTELGRKAKEYM 53 Query: 71 FAAARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 R + V E + +P +G + D F + Q E + Sbjct: 54 ---DRGELVPDEVVIGIVRERLSQPDCEKGF--ILDGFPRT--VRQAEALDEMLDEM--- 103 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DY----F 162 D I +++P + +KR+ R ++ + D Sbjct: 104 ------GRKIDAVISIEVPEEEIVKRIVYRRICKQCGAVYNLIYNPPKVDGKCDKCGGEL 157 Query: 163 ERKDVMIHEKRRQIFLDIARN-QP--DRCHI------VDSAHSFQSVATNILNIVWEL 211 ++D E R+ + +P + VD S + V I +I+ ++ Sbjct: 158 YQRDDDKEEVVRERYRVYKEQTEPLKEYYRRTGVLYEVDGTKSIEEVFNEIDSILQKI 215 >gi|239943140|ref|ZP_04695077.1| hypothetical protein SrosN15_19256 [Streptomyces roseosporus NRRL 15998] gi|239989598|ref|ZP_04710262.1| hypothetical protein SrosN1_20016 [Streptomyces roseosporus NRRL 11379] Length = 311 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 I+F G++G GK+T L+R L ++ V Sbjct: 12 IAFLGMDGVGKSTLAQELERRLTQRGRPV 40 >gi|194885339|ref|XP_001976420.1| GG20023 [Drosophila erecta] gi|190659607|gb|EDV56820.1| GG20023 [Drosophila erecta] Length = 677 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 58 MKTGDLIAILGGSGAGKTTLLAAISQRLR 86 >gi|157016|gb|AAA28398.1| brown protein [Drosophila melanogaster] Length = 675 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84 >gi|328463310|gb|EGF35001.1| deoxynucleoside kinase [Lactobacillus rhamnosus MTCC 5462] Length = 185 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 14/101 (13%) Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ-PDR 187 +PD + L + D L +Q+R E + + V + + + D A+ Sbjct: 73 LPDLAVYLKIDPDHELDEIQSRGRDMEDI---RQKPELVAYYRRVNAAYQDWAKGYTRSS 129 Query: 188 CHIVD--------SAHSFQSVATNILNIVWELVQKRVSPLS 220 +D SA +V I + + +L ++SP + Sbjct: 130 MITIDRDRYDFMHSAADRATVLDQIESKLVDL--GKLSPQT 168 >gi|309363328|emb|CAP26940.2| hypothetical protein CBG_06663 [Caenorhabditis briggsae AF16] Length = 474 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 3/110 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L F + + V E + L Sbjct: 81 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDAEQSYIFQR- 139 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 ++ ++++ N +++CDR AY + D + L Sbjct: 140 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSQEDWQRML 188 >gi|318066025|ref|NP_001187564.1| guanylate kinase [Ictalurus punctatus] gi|308323375|gb|ADO28824.1| guanylate kinase [Ictalurus punctatus] Length = 197 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 33/179 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDV-HVTREP-----GGTPAAEAARHV 53 M+ + G GAGK+T + L + + + V H TR P G R Sbjct: 1 MSGPRPVVLSGPSGAGKSTLLKRLMQEYEGVFGFSVSHTTRNPRPGEENGKDYHFTTREK 60 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + + G E VF+ ++ I + I + D Sbjct: 61 MQEGIDN--GDFIENAVFSGNMYGTSKSAIEDVQAQNLICILD----------------- 101 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMI 169 + L ++ I ++ P I + + +I +R+++R + E + E + + Sbjct: 102 -VDLQGVKNIKQTDLNP---IYISIQPPSMEILEQRLRDRQTETEESLQKRLEAARIDM 156 >gi|308063593|gb|ADO05480.1| adenylate kinase [Helicobacter pylori Sat464] Length = 191 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V++ + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVEVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189 >gi|294617091|ref|ZP_06696758.1| deoxyguanosIne kinase [Enterococcus faecium E1679] gi|291596649|gb|EFF27875.1| deoxyguanosIne kinase [Enterococcus faecium E1679] Length = 217 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 76/234 (32%), Gaps = 42/234 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++ + Y+ E A E Sbjct: 2 IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS---------QH 114 A + L+ I+ A+ + +L DR + DS + Sbjct: 47 QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVCVYDE 105 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + ++E+ + + PD + + + D L+R++ R E F+ +++ Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162 Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 + + + I +D + + V I + E+ Q +VS Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTKVS 216 >gi|301096852|ref|XP_002897522.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262106982|gb|EEY65034.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 261 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 42/117 (35%), Gaps = 15/117 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ EG G GKT L + + YD+ A + +L + Sbjct: 10 VALEGCHGCGKT----ALCEEFEAQGYDILDEAFMDMPAYALHPQSLL--METSWVCSWF 63 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E ++ A R ++P ++ + DR S+ Y + + + ++E+ Sbjct: 64 ERVLRLADR-------VKP--GRKQVFIADRSPFSAVLYSANGHLLEPVIREQMREV 111 >gi|258541006|ref|YP_003175505.1| kinase [Lactobacillus rhamnosus Lc 705] gi|257152682|emb|CAR91654.1| Kinase [Lactobacillus rhamnosus Lc 705] Length = 173 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 63/211 (29%), Gaps = 50/211 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L++ L + + R +L+ Sbjct: 2 MKQ--LIILRGNSGSGKTTTAKALRKHLTN-----------SLLISQDVVRRDMLAEKDK 48 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I A R +I++ + + S+ Y L +L Sbjct: 49 PNSPNIELIDLIA----------RFGFSHQQIVIVE-GILSAARY--------GQMLKAL 89 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLD 179 + Q DL D L+R +R +H R +L Sbjct: 90 MNTADQS----LVYYFDLSFDETLRRHAHRPKAAAFGAE--------AMHRWFRPHDYLG 137 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + H++ + S +V + IL + + Sbjct: 138 VPNE-----HLIQADQSQDTVVSRILADLNK 163 >gi|253741359|gb|EES98231.1| Deoxynucleoside kinase [Giardia intestinalis ATCC 50581] Length = 141 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 16/123 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +FIS G+ GAGKTT L + + V+ EP F Sbjct: 31 MFISISGLIGAGKTTLAEELA---KXMGFPVYY--EPVEDNI--YLEDFYKDMKTYGFPM 83 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122 + + R + +I G + DR + D+ +A + + L + Sbjct: 84 QVYLLN---RRYQQHQQIIW----SGDGAVQDRSIYEDAVFARILVKQGTCRSVTTRLIQ 136 Query: 123 ISV 125 I Sbjct: 137 IYT 139 >gi|239982432|ref|ZP_04704956.1| ATP/GTP-binding protein [Streptomyces albus J1074] Length = 240 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 53/159 (33%), Gaps = 43/159 (27%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + G+ G+GK+T I R + + D TRE Sbjct: 71 QGDLVVVSGLPGSGKSTLIRRTVRAARADSQD---TRE---------------QWEARLP 112 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCD----RFLDSSYAYQGERDSSQHLFL 117 A A+ ARL H +R L G+ +++ D R++ A + R Sbjct: 113 AALPYALYRPLARLAHYA-ALRRLLRAGRSVVVHDCGTQRWVRHWLAREARRRG------ 165 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR 154 +L + LD+ D L +R + R R Sbjct: 166 RTLHM-----------VFLDVDPDTALDGQRARGRGVSR 193 >gi|126651267|ref|XP_001388358.1| ABC transporter protein [Cryptosporidium parvum Iowa II] gi|126117452|gb|EAZ51552.1| putative ABC transporter protein [Cryptosporidium parvum Iowa II] Length = 782 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 17/158 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58 + G I G G+GK+T ++ L L+ + Y++ R V+ Sbjct: 134 SPGQLIGIMGPSGSGKSTLLNALSGRLKGREYNIKGSVAINGFTDIDLGYLTRMVVQDDY 193 Query: 59 VDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQ 113 + + E + + A RL H R E I + D R + +Y + Sbjct: 194 LLPYLTIKETMDIVAGLRLPHYSKKDR---EEKIIEILDIMGLRHVQDTYVGGISKKGIS 250 Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149 + L I+++ + P + LD GL + Sbjct: 251 GGEMKRLS-IALELIQNPP--ILFLD-EPTTGLDAARA 284 >gi|32399106|emb|CAD98346.1| putative ABC transporter protein, possible [Cryptosporidium parvum] Length = 774 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 17/158 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58 + G I G G+GK+T ++ L L+ + Y++ R V+ Sbjct: 126 SPGQLIGIMGPSGSGKSTLLNALSGRLKGREYNIKGSVAINGFTDIDLGYLTRMVVQDDY 185 Query: 59 VDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQ 113 + + E + + A RL H R E I + D R + +Y + Sbjct: 186 LLPYLTIKETMDIVAGLRLPHYSKKDR---EEKIIEILDIMGLRHVQDTYVGGISKKGIS 242 Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149 + L I+++ + P + LD GL + Sbjct: 243 GGEMKRLS-IALELIQNPP--ILFLD-EPTTGLDAARA 276 >gi|257066455|ref|YP_003152711.1| guanylate kinase [Anaerococcus prevotii DSM 20548] gi|256798335|gb|ACV28990.1| guanylate kinase [Anaerococcus prevotii DSM 20548] Length = 202 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G + G G GK T + L Y V TR+ + + Sbjct: 1 MKKGFLLVISGPSGVGKGTVLHDLMNTQTNLVYSVSATTRKKRDGEIEGVSYFYISHEEF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94 ++ E + + +A ++ ++ + + EGKI++ Sbjct: 61 EKMIEEDKFLEYAHVHNNYYGTPKDFVENKINEGKIVI 98 >gi|194747145|ref|XP_001956013.1| GF24995 [Drosophila ananassae] gi|190623295|gb|EDV38819.1| GF24995 [Drosophila ananassae] Length = 223 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 14/99 (14%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL-------DIARN 183 D + D + LKR+ R + D E+ RQ DI Sbjct: 131 DLALYFDCSEETMLKRIMARAAAAAVQRADDNEKT-------IRQRLKTFKNNTNDILEL 183 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 ++ +++ + + + +++K+ ++++ Sbjct: 184 YNEKTLTINAERDVDDIFLEVCQAIDCVLKKKAKQVAAQ 222 >gi|85859092|ref|YP_461294.1| cytidylate kinase [Syntrophus aciditrophicus SB] gi|85722183|gb|ABC77126.1| cytidylate kinase [Syntrophus aciditrophicus SB] Length = 256 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL 28 M L I+ +G G+GK+T L R L Sbjct: 33 MIKKLLITIDGPAGSGKSTASKALAREL 60 >gi|313672979|ref|YP_004051090.1| guanylate kinase [Calditerrivibrio nitroreducens DSM 19672] gi|312939735|gb|ADR18927.1| guanylate kinase [Calditerrivibrio nitroreducens DSM 19672] Length = 203 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 4/99 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G GAGKTT + L + Y V + TR P + Sbjct: 3 KKGKLFVVSAPSGAGKTTLCNKLLQAYDDLIYSVSYTTRPPRFDEIDGKDYFFITVGKFK 62 Query: 61 EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD 96 E E I +A ++ I L +GK ++ D Sbjct: 63 EMVDNDEFIEWAEVHGNYYGTSRTFIEENLKKGKNIILD 101 >gi|301070269|gb|ADK55561.1| GPN-loop GTPase 1 [Zonotrichia albicollis] Length = 351 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 11/94 (11%) Query: 14 GAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGVDEF 62 G+GKTT + L L + VH P + + V+ G+ Sbjct: 3 GSGKTTFVQRLAAHLHGQRCPPYVINLDPAVHSLPFPANIDIRDTVKYKEVMKQYGLGPN 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I K ++ D Sbjct: 63 GGIVTSLNLFATRFDQVMKFIEKRQNASKYVIID 96 >gi|291301009|ref|YP_003512287.1| NB-ARC domain-containing protein [Stackebrandtia nassauensis DSM 44728] gi|290570229|gb|ADD43194.1| NB-ARC domain protein [Stackebrandtia nassauensis DSM 44728] Length = 827 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 17/100 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTR--------EPGGTPAAEAARHVLLS 56 I+ EG+ G GKTT + + L+ YD ++ EPG P A R L+ Sbjct: 151 ITIEGMAGVGKTTLAQRVCQELESLGDGYDTRLSVDLRGYDPTEPGADPDA-VIRGFLVH 209 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G + + + R +H ++ ++L D Sbjct: 210 LG---MSPQHIDGLSPSERREHYARLL---AERRALILLD 243 >gi|120434670|ref|YP_860359.1| deoxyadenosine kinase [Gramella forsetii KT0803] gi|117576820|emb|CAL65289.1| deoxyadenosine kinase [Gramella forsetii KT0803] Length = 204 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 57/190 (30%), Gaps = 34/190 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT LL + H EP E ++ + + + Sbjct: 10 GAGKTTLTRLLAK---------HYKWEPQFEDVLENPYLEDFYNKMERWSFNLQIYFLNS 60 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSS--------YAYQGERDSSQHLFLDSLQEI 123 I GK ++ DR + D+ RD + L L E Sbjct: 61 RFRQ-----ILQIRESGKKIIQDRTIYEDAYIFAPNLHAMGLMTNRDFENYKSLFDLMES 115 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 VQ PD I L + + ++ +R E++ + + + + + Sbjct: 116 VVQG--PDLLIYLRSSIPNLVAQIHSRGREYENSI-------SIDYLSRLNERYEAWVHD 166 Query: 184 Q-PDRCHIVD 192 I+D Sbjct: 167 YSKGNLVIID 176 >gi|17647219|ref|NP_523824.1| brown, isoform A [Drosophila melanogaster] gi|115140|sp|P12428|BROWN_DROME RecName: Full=Protein brown gi|157014|gb|AAA28397.1| brown protein [Drosophila melanogaster] gi|21626629|gb|AAF47020.3| brown, isoform A [Drosophila melanogaster] Length = 675 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84 >gi|253575772|ref|ZP_04853107.1| guanylate kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844815|gb|EES72828.1| guanylate kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 196 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41 M+ GL I G G GK T + L++ + Y V TR+P Sbjct: 5 MSKGLLIVLSGPSGVGKGTVCTELRKRMPELVYSVSATTRQP 46 >gi|229551236|ref|ZP_04439961.1| conserved hypothetical protein [Lactobacillus rhamnosus LMS2-1] gi|229315399|gb|EEN81372.1| conserved hypothetical protein [Lactobacillus rhamnosus LMS2-1] Length = 172 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 63/211 (29%), Gaps = 50/211 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L++ L + + R +L+ Sbjct: 1 MKQ--LIILRGNSGSGKTTTAKALRKHLTN-----------SLLISQDVVRRDMLAEKDK 47 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I A R +I++ + + S+ Y L +L Sbjct: 48 PNSPNIELIDLIA----------RFGFSHQQIVIVE-GILSAARY--------GQMLKAL 88 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLD 179 + Q DL D L+R +R +H R +L Sbjct: 89 MNTADQS----LVYYFDLSFDETLRRHAHRPKAAAFGAE--------AMHRWFRPHDYLG 136 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + H++ + S +V + IL + + Sbjct: 137 VPNE-----HLIQADQSQDTVVSRILADLNK 162 >gi|168047025|ref|XP_001775972.1| predicted protein [Physcomitrella patens subsp. patens] gi|162672630|gb|EDQ59164.1| predicted protein [Physcomitrella patens subsp. patens] Length = 246 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 63/212 (29%), Gaps = 41/212 (19%) Query: 11 GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK T + + L D+ G ++++ + Sbjct: 42 GGPGSGKGTQCAKIVDTYGFEHLSAG--DLLRAEINSGNENGTMIQNMIKEGKIVP---- 95 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A+ E D+FL + R+ D + Sbjct: 96 ----------AEVTVKLLEKAMKESD---NDKFLIDGF----PRNLDNRRCFDEVT---- 134 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182 + P + + P ++ KR+ R R ++ ++ + E + + Sbjct: 135 -GIEPQFILFFECPEEVMEKRLLGRNQGRVDDNIETIRKRFKVFIESSLPVVSHYEEC-- 191 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + H +D+ + V I + QK Sbjct: 192 ---GKVHKIDATKNPDEVFETIKPLFQNFKQK 220 >gi|290975101|ref|XP_002670282.1| predicted protein [Naegleria gruberi] gi|284083839|gb|EFC37538.1| predicted protein [Naegleria gruberi] Length = 273 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 83/236 (35%), Gaps = 64/236 (27%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G G GK+T ++++++ + E + +LL ++ Sbjct: 51 IACDGNIGVGKSTLCKVMQQYIHK-----------------EFSSSILLCHIEEDVEKNI 93 Query: 67 EAIV-FAAARLDH--------VENVIRPAL------------MEGKILLCDRFLDS-SYA 104 E + + + ++ +++ I+ L + +++ DR L + + Sbjct: 94 ELFKKYLSNQREYGLEFQKWIIKDKIQQFLDKVSIWEDENVEQDKIVVIMDRSLLADRFV 153 Query: 105 YQGERDSSQHLFLDSLQEIS-----------VQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 + + + + LQ+ V PD IIL+ +D+ ++R+ R + Sbjct: 154 FFRNLLEKKLMSQEQLQDYEQTFEKMSREYPVNLFYPDFHIILEASIDVAMERINRRNRV 213 Query: 154 RESACLDY-----FERKDVMIHEK--RRQIFLDIARNQPDRCHIVDSAHSFQSVAT 202 ES+ + E + +++ R+ I + S ++ Sbjct: 214 GESSVYNKNYLQMIEDFHLDMYKTLPVREG--AIVYRHDNSI-----NQSITNIEQ 262 >gi|323339590|ref|ZP_08079864.1| dephospho-CoA kinase [Lactobacillus ruminis ATCC 25644] gi|323092985|gb|EFZ35583.1| dephospho-CoA kinase [Lactobacillus ruminis ATCC 25644] Length = 196 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 35/226 (15%), Positives = 68/226 (30%), Gaps = 62/226 (27%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHV----LLSC 57 G+ G GK+T + LK F V E G+ E + +L Sbjct: 6 GLTGGIACGKSTISAYLKEF----GLPVIDADECSRAVVEKGSIGLEKLTEIFGNKILEN 61 Query: 58 GVDE---------FGAEAEAIVFAAARLDHVENVIRPALME---GKILLCDRFLDSSYAY 105 F + + + + I L + +++ D Sbjct: 62 DGTLNRKALGQIVFSDSEQLSLLNSVMEPLIREEISRRLNQENNADLVVLD--------- 112 Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 L ++ + +M TI D+P I L+R+ R L E E + Sbjct: 113 -------APLLIEQHYDKICDFIM---TI--DVPKKIQLERLIERDKLSEDEAKSRIESQ 160 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + R F D ++DS+ + + ++ + + Sbjct: 161 ---LSSRERNGFAD---------VVIDSSGTVEQTRKQVIKWLKTI 194 >gi|188585314|ref|YP_001916859.1| deoxynucleoside kinase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350001|gb|ACB84271.1| deoxynucleoside kinase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 208 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 28/159 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I +G+ G+GKTT ++ L L + V E P R + V Sbjct: 6 IVVDGMTGSGKTTLVNHLANELNLE-----VMPEEFRDPYNLLYR---FADDVKWCYPMQ 57 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS---------SYAYQGERDSSQHL-F 116 + + E + + DR + S + Y E+ +L F Sbjct: 58 LNFLMT-------RYIQYTVASEHENYILDRSIYSDPVYAKLYYNMGYLSEKQYDNYLNF 110 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 DSL+E P C IIL+ D ++R+ +R E Sbjct: 111 YDSLEE---DIKEPKCMIILNCSFDEIMRRIVDRGRSDE 146 >gi|218961024|ref|YP_001740799.1| DNA repair protein radA homolog (DNA repair protein sms homolog); putative ATP-dependent protease, with nucleoside triP hydrolase and multiheme cytochrome domains [Candidatus Cloacamonas acidaminovorans] gi|167729681|emb|CAO80593.1| DNA repair protein radA homolog (DNA repair protein sms homolog); putative ATP-dependent protease, with nucleoside triP hydrolase and multiheme cytochrome domains [Candidatus Cloacamonas acidaminovorans] Length = 444 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 11/95 (11%) Query: 3 SGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I G E G GK+T + L ++ ++N G +AE R L + Sbjct: 83 KGMLILI-GGEPGIGKSTLMLQLSEWMGKQNKKTLYCS---GEESAEQIR---LRSKHLK 135 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +E ++ +H+ I + + + D Sbjct: 136 VTSENIYLL-CTNNAEHIIEAIED--NKPDLAIVD 167 >gi|187735980|ref|YP_001878092.1| Guanylate kinase [Akkermansia muciniphila ATCC BAA-835] gi|187426032|gb|ACD05311.1| Guanylate kinase [Akkermansia muciniphila ATCC BAA-835] Length = 200 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 13/105 (12%) Query: 1 MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVL 54 M G + G G+GKTT L R V+ TR+P H L Sbjct: 4 MKQPLGTLLVVSGPSGSGKTT----LCRRATENGLCVYSISCTTRQPRPGEVNGVDYHFL 59 Query: 55 LSCGVDEFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCD 96 D + + +A R ++ I L +GK ++ D Sbjct: 60 TPAEFDARVERGDFLEYAEVHGNRYGTLKADILTLLEQGKNVVMD 104 >gi|149727672|ref|XP_001502194.1| PREDICTED: similar to XPA binding protein 1 [Equus caballus] Length = 374 Score = 41.2 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHSQGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNISKYVLID 122 >gi|227529614|ref|ZP_03959663.1| ATPase [Lactobacillus vaginalis ATCC 49540] gi|227350404|gb|EEJ40695.1| ATPase [Lactobacillus vaginalis ATCC 49540] Length = 609 Score = 40.8 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 15/104 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH-------------- 52 ++ G GAGKTT I+LL+RF + K +++ + + + + R Sbjct: 397 VAIVGPTGAGKTTIINLLERFYEVKGGKIYLDGQNTRSMSRDELRSHIAMVLQDTWLFTG 456 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + V+ AARL H +N IR L +G + D Sbjct: 457 TIFDNIKYGREDASADEVYQAARLAHADNFIRE-LPDGYDTILD 499 >gi|190572493|ref|YP_001970338.1| putative transcriptional regulator NadR [Stenotrophomonas maltophilia K279a] gi|190010415|emb|CAQ44023.1| putative TRANSCRIPTIONAL REGULATORY PROTEIN NADR (PROBABLY ASNC-FAMILY) [Stenotrophomonas maltophilia K279a] Length = 357 Score = 40.8 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 38/196 (19%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI G E +GKTT ++ LQ E G T L E + Sbjct: 185 FI---GGESSGKTTLARVMAERLQ-----TVWVPEYGRT---------LWEQQGGELTPD 227 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + A A+ H + R A + L CD + G ++L++ + Sbjct: 228 -DLLRIAMAQPQHEDETARHA---HRWLFCD---TTPMVTLGYSGWMSGTAPEALRQAA- 279 Query: 126 QEVMP-DCTIIL--DLPVDIGLKRVQNRYSLRESACLDY-FERKDVMI-------HEKRR 174 + P D + D+P D RV + ++ A E + V + Sbjct: 280 --LRPYDLLFLCAPDIPFDQDGTRVGEAFRAQQHAWYVRELEARGVDYVLLEGGLEARIA 337 Query: 175 QIFLDIARNQPDRCHI 190 ++ ++A+ +R + Sbjct: 338 RVHGELAKRADNRFSV 353 >gi|46115874|ref|XP_383955.1| hypothetical protein FG03779.1 [Gibberella zeae PH-1] Length = 197 Score = 40.8 bits (95), Expect = 0.12, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 60/215 (27%), Gaps = 46/215 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK---NYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 LF+S G +GK++ L L K D H E D Sbjct: 21 LFVS--GPTASGKSSVAKYLADELNLKFVEGDDFHPKSNVDKMSRGEPL------TDQDR 72 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G +H + + + ++ C S+ Q ++ Sbjct: 73 LGWLQAL-------HEHAIHHPKGPGADHLVVTC-----SALKRQY--RDLLRQGSENAG 118 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ V + LD P ++ +R R + L F + Sbjct: 119 DLRVHFLH------LDAPEEVLRQRAAARKGHFAGSAL-------------VHSQFEALE 159 Query: 182 R-NQPDR-CHIVDSAHSFQSVATNILNIVWELVQK 214 R +R + + + V L V EL+ + Sbjct: 160 RPANDERDVLTISVDQTVEEVQREALARVTELLDE 194 >gi|331702091|ref|YP_004399050.1| deoxyadenosine kinase [Lactobacillus buchneri NRRL B-30929] gi|329129434|gb|AEB73987.1| Deoxyadenosine kinase [Lactobacillus buchneri NRRL B-30929] Length = 212 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 28/160 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKT+ +L + L P + E R + + + A + Sbjct: 9 GAGKTSLTKMLSQHLGT----------PAYYESVEHNRIL----PLFYKDPKKYAFLLQI 54 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQEISVQEVM-- 129 L+ + I+ A + +L DR F DS + ++ + ++ +M Sbjct: 55 DFLNRRMDDIKKAWQNDESVL-DRSIFEDSLLFHLNADLGRATETEVTIYDSLLENMMQE 113 Query: 130 ---------PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 PD I +++ + L+R+Q R E D Sbjct: 114 MPQTDHSKNPDLLIHINISFETMLRRIQKRGRSYEQIDND 153 >gi|167895130|ref|ZP_02482532.1| adenylylsulfate kinase [Burkholderia pseudomallei 7894] Length = 198 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|167816638|ref|ZP_02448318.1| adenylylsulfate kinase [Burkholderia pseudomallei 91] Length = 196 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|295398084|ref|ZP_06808133.1| deoxyguanosine kinase [Aerococcus viridans ATCC 11563] gi|294973603|gb|EFG49381.1| deoxyguanosine kinase [Aerococcus viridans ATCC 11563] Length = 224 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 37/195 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G+ G GKTT +L++ L P E+ ++ + E Sbjct: 4 ITVGGMIGLGKTTVTNLIRDEL-------------DFKPFYESVEDNIMLPYFYKASPEE 50 Query: 67 EAI-----VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQHL 115 + + + L+ I+ A E K +L DR F D +A G + Sbjct: 51 QLLKRYPFLTQLDFLNSRFKTIKQASREDKTVL-DRSIFEDWYFARVNTDIGRISEEEFS 109 Query: 116 FLDSLQEISVQEV------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++L ++E+ PD + L + + R++NR E + Sbjct: 110 IYENLSRNMMEELAEIPRKHPDLMLYLHGSFETVMTRIENRGRDFEQGE------ELTNY 163 Query: 170 HEKRRQIFLDIARNQ 184 + + + D N Sbjct: 164 YHRLWSGYDDWVENH 178 >gi|269121289|ref|YP_003309466.1| cytidylate kinase [Sebaldella termitidis ATCC 33386] gi|268615167|gb|ACZ09535.1| cytidylate kinase [Sebaldella termitidis ATCC 33386] Length = 218 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 81/229 (35%), Gaps = 31/229 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV---------HVTREPGGTPAAEAARHVLL 55 + I+ +G G+GK+T ++ L D + +E E +L Sbjct: 1 MIIAVDGPAGSGKSTVSKMIADELGITYLDTGAMYRLFAYKLMKENIDFSDREKELKLLE 60 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQH 114 +D + D + + ++ + R + Q E S+ Sbjct: 61 DLNIDMKDNR--FYLDNEDVTDKIRTRETSSNASKISVVKEVR--EKMVELQREFSKSKD 116 Query: 115 LFLDSLQEISVQEVMP--DCTIILDLPVDI-GLKRVQNRYSLRESACLDYFERK-----D 166 + LD ++I V P D + L+ +I +R + + E+ + R+ Sbjct: 117 VILDG-RDIGT-VVFPNADLKVYLNADPEIRAERRCKELRNKGENVEYEEILREITKRDY 174 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILNIVWELVQK 214 +H K + L IA + I+DS + S + + I +V E +K Sbjct: 175 NDMHRK--ESPLKIAEDA----VILDSTSLSAEEIKDKIKKLVEEKTKK 217 >gi|153832401|ref|ZP_01985068.1| conserved hypothetical protein [Vibrio harveyi HY01] gi|148871430|gb|EDL70293.1| conserved hypothetical protein [Vibrio harveyi HY01] Length = 129 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 21/41 (51%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 M + I G+ G+GKTT L + L+ K+++ + E Sbjct: 1 MPNAKLILIRGLPGSGKTTLAKKLSKQLKAKHFEADMYFEN 41 >gi|134045133|ref|YP_001096619.1| seryl-tRNA(Sec) kinase [Methanococcus maripaludis C5] gi|132662758|gb|ABO34404.1| seryl-tRNA(Sec) kinase [Methanococcus maripaludis C5] Length = 255 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 30/163 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G+ GK+T + + + KN D + ++ + Sbjct: 1 MLIILTGLPSVGKSTFSKAISKKMAEKNIDNII-----------LGTDLIRESFPVWKES 49 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E I D +I+ AL ++ D D++Y Y +R ++ E Sbjct: 50 YEEFI------RDSNNYLIKEALGNNFSVIVD---DTNY-YNSKRR----DLMNIANEFD 95 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKD 166 V TI L P+D+ LKR R + + + +E+ D Sbjct: 96 SNYV----TIYLKAPLDLLLKRNIERGQKIPNEVIKNMYEKFD 134 >gi|323143554|ref|ZP_08078231.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT 12066] gi|322416617|gb|EFY07274.1| ABC transporter, ATP-binding protein [Succinatimonas hippei YIT 12066] Length = 587 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ 29 G IS G +G+GKTT + LL L+ Sbjct: 32 GNLISITGPDGSGKTTLLKLLAGNLK 57 >gi|260833138|ref|XP_002611514.1| hypothetical protein BRAFLDRAFT_63851 [Branchiostoma floridae] gi|229296885|gb|EEN67524.1| hypothetical protein BRAFLDRAFT_63851 [Branchiostoma floridae] Length = 1503 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T LL+ L + N V T P P R LL + Sbjct: 1047 VVIVGPSGSGKSTLWRLLRSALSKMNKTVKQYTMNPKAMP-----RTQLLGYIDIDTREW 1101 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++ ++ ++ARL V++ ++CD +++SL + Sbjct: 1102 SDGVLTSSARL-----VVKEPQDIQSWIVCD-------------GDIDPEWIESLNSV 1141 >gi|254386364|ref|ZP_05001670.1| deoxynucleoside kinase protein [Streptomyces sp. Mg1] gi|194345215|gb|EDX26181.1| deoxynucleoside kinase protein [Streptomyces sp. Mg1] Length = 218 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 32/234 (13%), Positives = 71/234 (30%), Gaps = 56/234 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKT+ L+ + L +V P + + +E A+ + Sbjct: 9 GIGKTSVAELIAKEL---GSEVFFES-VEDNPILP----LFYTASPEEIQAKRYPFLLQL 60 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLD---------------SSYAYQGERDSSQHLFLD 118 L I+ A +L DR + SS Q + + Sbjct: 61 YFLQTRFASIKDAYHRADNVL-DRSIYEDWYFAKVNHDLGRISSLEMQVY-EGLLGEMMR 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 ++ + ++ PD + L + + R+ R FE+ + ++ + + Sbjct: 119 EIEGLPYRK-APDLMVYLKADFETVMYRIGLRGRD--------FEQDEALV-----EYYR 164 Query: 179 DIARNQPDRCH---------IVDSAHS-----FQS---VATNILNIVWELVQKR 215 + D H ++D + + VA + + + + +R Sbjct: 165 TLWSGYDDWVHKHYSASDVLVIDMNRTDVVNNPEDAARVAQEVKDALAAVAARR 218 >gi|118478481|ref|YP_895632.1| uridine kinase [Bacillus thuringiensis str. Al Hakam] gi|196042741|ref|ZP_03109980.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB108] gi|225865124|ref|YP_002750502.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB102] gi|229185392|ref|ZP_04312575.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BGSC 6E1] gi|118417706|gb|ABK86125.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] gi|196026225|gb|EDX64893.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB108] gi|225786994|gb|ACO27211.1| phosphoribulokinase/uridine kinase [Bacillus cereus 03BB102] gi|228598125|gb|EEK55762.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BGSC 6E1] Length = 218 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 17/191 (8%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I GI G AGKTT + L L + + T + + + + Sbjct: 19 IVI-GISGHGAAGKTTFANRLVNLLNQNEINYINTDPYIVSSDIRKYAVIQYTYQNENHR 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A AA L +E I+ + G D + ++ Y S + ++ + Sbjct: 78 YKMTACHPAAHHLAALERDIQ-MVRAG----LDFYTIDTH-YMKSELISSKNKITIVEGM 131 Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S + P D I + L R +R A ++Y + HE+RR + Sbjct: 132 SAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGADINYLSQS----HEERRIQYEVF 187 Query: 181 ARNQPDRCHIV 191 + R I+ Sbjct: 188 MHSYSQRFDII 198 >gi|307594532|ref|YP_003900849.1| thymidylate kinase-like protein [Vulcanisaeta distributa DSM 14429] gi|307549733|gb|ADN49798.1| thymidylate kinase-like protein [Vulcanisaeta distributa DSM 14429] Length = 205 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 24/57 (42%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I G +G+GK+T LL ++L R +Y A+ AR + L + Sbjct: 6 ICLFGPDGSGKSTLARLLAQYLARGDYVRISWVRGSHMAASLLARFLALFPSMRGVD 62 >gi|222480323|ref|YP_002566560.1| adenylate kinase [Halorubrum lacusprofundi ATCC 49239] gi|222453225|gb|ACM57490.1| adenylate kinase [Halorubrum lacusprofundi ATCC 49239] Length = 207 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 72/234 (30%), Gaps = 61/234 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + L YDV +A R + + Sbjct: 5 ILLLGAPGAGKGTQSAKLADE-----YDVEHV------TTGDALRAN-KDMETEYGTPRS 52 Query: 67 EAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A L V +++ AL + D F+ Y R+ Q +L + ++ Sbjct: 53 ---FMEAGELVPDPVVNEIVKAALAD-----ADGFVLDGY----PRNLDQAEYLSEITDL 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDY---------------FERK 165 D I LD+ ++ + R+ R + +D+ ++ Sbjct: 101 -------DAVIFLDVDEEVLVDRLTGRRVCDDCGANFHVDFQPPEEAGVCDECGGELIQR 153 Query: 166 DVMIHEKRRQIFLDIARN-QP--DRC------HIVDSAHSFQSVATNILNIVWE 210 D E R+ N +P D VD + V I +++ E Sbjct: 154 DDDTEETARERLEVFYENTEPVIDHFRDEGDLVEVDGEATPDEVFERIRDVLDE 207 >gi|20095049|ref|NP_614896.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19] gi|19888325|gb|AAM02826.1| Signal recognition particle GTPase [Methanopyrus kandleri AV19] Length = 349 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 32/139 (23%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARH------VLLSC 57 +F+ G+ G+GKTT I+ + + L+ Y V + + A E V L Sbjct: 154 MFV---GVNGSGKTTTIAKVAKLLKDHGYSVVIAAADTFRAAAIEQLEEHAERLGVTLIK 210 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLF 116 G A A N ++ A +GK ++L D R + Sbjct: 211 GERGDDPTAVAF-----------NAVQHAEAKGKDVVLVD---------TAGRAYTDVNL 250 Query: 117 LDSLQEISVQEVMPDCTII 135 ++ L+++ + + PD + Sbjct: 251 MEELKKM-KRVLEPDLVVF 268 >gi|255636174|gb|ACU18429.1| unknown [Glycine max] Length = 183 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 38/150 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L R L K + R + Sbjct: 28 QKGCVIWLTGLSGSGKSTIACALSRSLHSKGK-------LSYILDGDNIR----HGLNQD 76 Query: 62 FGAEAEAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119 AE R +++ + A L ++C + S + YQ +RD Sbjct: 77 LSFRAE------DRSENIRRIGEVAKLFADAGVIC---ITSLISPYQKDRD--------- 118 Query: 120 LQEISVQEVMP--DCT-IILDLPVDIGLKR 146 + + +MP D + +D+P+ + R Sbjct: 119 ----ACRALMPKGDFIEVFIDVPLHVCEAR 144 >gi|239825599|ref|YP_002948223.1| deoxynucleoside kinase [Geobacillus sp. WCH70] gi|239805892|gb|ACS22957.1| deoxynucleoside kinase [Geobacillus sp. WCH70] Length = 222 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 67/226 (29%), Gaps = 46/226 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + + E T L D F + Sbjct: 15 ITIAGTVGVGKSTMTKALAKALNFR-----TSFEKVDTNP-------YLDKFYDNFERWS 62 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123 + F A R + G + DR + A+ + ++ + ++ E Sbjct: 63 FHLQIYFLAERF----KEQKRMFEYGGGFVQDRSIYED-AHIFAKMHFENGTMTAVDYET 117 Query: 124 SVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 PD I L+ + +KR++ R E + + ++ Sbjct: 118 YTSLFQAMVMTPYFPHPDLLIYLEGSFEEVMKRIRERGRPMEQ-------KTPISYWKEM 170 Query: 174 RQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWE 210 + + + IV+ S + + I+ E Sbjct: 171 YERYEKWINEFNACPVLRVNINEYDIVEDEQSIEPIIKKASTIIHE 216 >gi|154151418|ref|YP_001405036.1| signal recognition particle-docking protein FtsY [Candidatus Methanoregula boonei 6A8] gi|153999970|gb|ABS56393.1| signal recognition particle-docking protein FtsY [Methanoregula boonei 6A8] Length = 344 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT ++ + +L+++ + V + G T A A + + G + Sbjct: 149 ILFTGVNGTGKTTTVAKIGAYLKKEGFSVVI--GAGDTFRAGAIEQI--GVHAERLGIKV 204 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + + ++ A+ ++L D R ++ + L++I Sbjct: 205 IEHQTGADPSAVLFDTVQYAIAHKTDVVLAD---------TAGRFHTKANLMSQLEKI-R 254 Query: 126 QEVMPDCTIILD 137 + + PD + +D Sbjct: 255 RVMKPDLIVYVD 266 >gi|37595845|ref|NP_932224.1| putative conjugative transfer protein TraD [Vibrio vulnificus YJ016] gi|37201928|dbj|BAC97747.1| putative conjugative transfer protein TraD [Vibrio vulnificus YJ016] Length = 705 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 5/128 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-G 63 I +G GAGK+ + L R+++++ V + + + ++ +LL+ + Sbjct: 205 ILIDGTTGAGKSVMLRKLLRWIRKRGDKAIVYDKGCTFTSKFFDPSQDILLNPFDERCAN 264 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A +++ N + P EG + R + SS AY+ +D+ L Sbjct: 265 WDVWCDAKEAPDFENIANALIPQHGEGDPFWVDSARTIFSSTAYRMSQDNKPCSTARLLS 324 Query: 122 EISVQEVM 129 I E+ Sbjct: 325 LILTSELE 332 >gi|315271322|gb|ACO47353.2| putative guanylate kinase (GMP kinase) [Deinococcus deserti VCD115] Length = 237 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 68/212 (32%), Gaps = 46/212 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTRE--PGGTPAAEAARHVLLSC 57 GL I G G GK T L +L+ ++ TRE PG + + + Sbjct: 16 RGLLIVMTGASGVGKGTLREL---WLRDQDVFYSTSWTTREARPGEVDGVDYI--FVSAD 70 Query: 58 GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 ++ + + A+ +H I AL G+ ++ + ++ A Q Sbjct: 71 AFEQKVQQGGFLEHASFVGNHYGTPVEPIEAALSRGQDVILE--IEVEGAMQVRDRMGDE 128 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 I +P L ++ R R + + E++ + R Sbjct: 129 AI---------------LVFI--MPP--SLTELRRRLEGRATETPERIEKR----LARAR 165 Query: 175 QIFLDIARNQPDRCHIVD-----SAHSFQSVA 201 + +I R IV+ + ++V Sbjct: 166 E---EIMHAHAFRYVIVNDDLNRAVQELEAVQ 194 >gi|295135565|ref|YP_003586241.1| HPPK and dNK domain-containing protein [Zunongwangia profunda SM-A87] gi|294983580|gb|ADF54045.1| HPPK and dNK domain-containing protein [Zunongwangia profunda SM-A87] Length = 375 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 12/154 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ +++ + K P E F E Sbjct: 181 YIAVEGNIGAGKTSFSTMISQDFNAKLILERFKDNPFLPKFYE-------DQERYAFSLE 233 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123 F A R + + + + ++ D + S + L + Sbjct: 234 MS---FLADRYQQLSDDLAQYDLFKDFVISDYDVFKSLIFAKITLEEDEYSLYQKLFHLM 290 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + V PD I L + L+ ++ R E Sbjct: 291 YKELVKPDLYIYLYQNTERLLQNIKKRGREYEQN 324 >gi|193652389|ref|XP_001951525.1| PREDICTED: hypothetical protein LOC100165836 [Acyrthosiphon pisum] Length = 420 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 2/99 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT S L F + + V+ E + + LS DE Sbjct: 11 IVLTGGPCGGKTTGQSRLCTFFENLGWKVYRVPETANVLLSGGIKFSELS--DDEAHKFQ 68 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 E ++ ++++ + + + +++CDR + AY Sbjct: 69 ENLLRCMLQIENTFFELGESCDQDCLIICDRGAMDAAAY 107 >gi|254296961|ref|ZP_04964414.1| adenylylsulfate kinase [Burkholderia pseudomallei 406e] gi|157807224|gb|EDO84394.1| adenylylsulfate kinase [Burkholderia pseudomallei 406e] Length = 204 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 18 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 60 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 61 SDADRMENIRRFAHVAKLFQREGYVVI 87 >gi|9625976|ref|NP_040223.1| thymidine kinase [Saimiriine herpesvirus 2] gi|125448|sp|P21293|KITH_SHV21 RecName: Full=Thymidine kinase gi|66706|pir||KIBEHS thymidine kinase (EC 2.7.1.21) - saimiriine herpesvirus 1 (strain 11[Onc]) gi|60341|emb|CAA45643.1| thymidine kinase [Saimiriine herpesvirus 2] gi|221856|dbj|BAA00432.1| thymidine kinase [Saimiriine herpesvirus 2] Length = 527 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 56/173 (32%), Gaps = 23/173 (13%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58 FI EG G GKTT + + L +V EP + E + L Sbjct: 210 FFIFLEGSIGVGKTTLLKSMNGIL--GGKNVLAFHEPIAYWTDVFSNSLEEVYKLTLPAK 267 Query: 59 VDEFGAEAEA----------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA---Y 105 V A+ ++ D + + L ++ DR S+ Y Sbjct: 268 VGRTSNSAKLLACQLKFASPLLALKTATDRLSSPKNSLLSSDMWVMFDRHPLSATVVFPY 327 Query: 106 QGERDS-SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 ++ L L S + D I+L+L LKRV+ R E + Sbjct: 328 MHFQNGFLSFSHLIQLWS-SFKASRGDNIILLNLNSQENLKRVKKRNRKEEKS 379 >gi|88854661|ref|ZP_01129327.1| adenylate kinase [marine actinobacterium PHSC20C1] gi|88815822|gb|EAR25678.1| adenylate kinase [marine actinobacterium PHSC20C1] Length = 199 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 77/218 (35%), Gaps = 38/218 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M L I G GAGK T + L T + R + + Sbjct: 1 MTRLLLI---GPPGAGKGTQAARLAEIY---GIPAIST--------GDIFRSNVKNG--T 44 Query: 61 EFGAEAEAIVFAAARL-DHVEN-VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E G +A+A + A + D + N +IR L E D FL Y R + Q LD Sbjct: 45 ELGTKAKAFMDAGDNVPDSLTNALIRDRLEEDDA--QDGFLLDGY----PRTTDQVRELD 98 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 S ++ D + L+ ++ + R++ R E D + + V+ H +++ Sbjct: 99 SF--LASHGAALDAVVELEADPEVVISRLRKR--ALEQGRSD--DTEAVVRHR--LEVYS 150 Query: 179 D----IARNQPDR--CHIVDSAHSFQSVATNILNIVWE 210 + + R +D+ +V I + E Sbjct: 151 EQTAPLINVYASRDVLVTIDALGEIDAVTARITEALVE 188 >gi|116493175|ref|YP_804910.1| deoxynucleoside kinase [Pediococcus pentosaceus ATCC 25745] gi|116103325|gb|ABJ68468.1| Deoxynucleoside kinase [Pediococcus pentosaceus ATCC 25745] Length = 210 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 80/229 (34%), Gaps = 40/229 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---G 63 I+ G GAGKTT LL ++A + + Sbjct: 2 IALSGPIGAGKTTLTELLTSH-----------------WESDAYYESVDDNKILPLFYKD 44 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFL 117 + A + L+ + I+ A + + + DR + DS A G +++ Sbjct: 45 PKRYAFLLQIYFLNKRMDSIKQANSDARSV-MDRSIYEDSLLFHLNADLGRATNTEVDIY 103 Query: 118 DSLQEISVQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 DSL + +QE+ PD + +D+ D LKR++ R E D + Sbjct: 104 DSLLKNMMQELPRLSYKKNPDLLVHIDISFDTMLKRIKKRGRSFEQIENDP---SLYEYY 160 Query: 171 EKRRQIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVS 217 + + ++ N I +D + V V +L+ ++++ Sbjct: 161 HELNKRYVAWFDNYDQSAKIKIDGDK-YDFVENPEARQKVIQLIDEKIA 208 >gi|300214188|gb|ADJ78604.1| ATPases of the AAA+ class [Lactobacillus salivarius CECT 5713] Length = 535 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62 FEG G GKTT ++ R V T+ E G + LS ++E Sbjct: 315 FEGPPGTGKTTVARIVARLFYALGILENTTVVETKRNELEGKWVGD------LSGKINEK 368 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 A V + N P +GK ++ Sbjct: 369 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 399 >gi|268566533|ref|XP_002647576.1| Hypothetical protein CBG06663 [Caenorhabditis briggsae] Length = 446 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 3/110 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L F + + V E + L Sbjct: 53 IVLTGGPCGGKTTAQVRLATFFENLGWKVFTVPETATILLGGRVKFSELDAEQSYIFQR- 111 Query: 67 EAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 ++ ++++ N +++CDR AY + D + L Sbjct: 112 -DLLATMHQIENTFFNQASAIKDRNVLIICDRGCMDPSAYSSQEDWQRML 160 >gi|67640790|ref|ZP_00439584.1| adenylyl-sulfate kinase [Burkholderia mallei GB8 horse 4] gi|121600462|ref|YP_993681.1| adenylylsulfate kinase [Burkholderia mallei SAVP1] gi|124384195|ref|YP_001028858.1| adenylylsulfate kinase [Burkholderia mallei NCTC 10229] gi|126440385|ref|YP_001059700.1| adenylylsulfate kinase [Burkholderia pseudomallei 668] gi|126449439|ref|YP_001081231.1| adenylylsulfate kinase [Burkholderia mallei NCTC 10247] gi|126454924|ref|YP_001066984.1| adenylylsulfate kinase [Burkholderia pseudomallei 1106a] gi|134277327|ref|ZP_01764042.1| adenylylsulfate kinase [Burkholderia pseudomallei 305] gi|167003824|ref|ZP_02269604.1| adenylyl-sulfate kinase [Burkholderia mallei PRL-20] gi|167739435|ref|ZP_02412209.1| adenylylsulfate kinase [Burkholderia pseudomallei 14] gi|167846550|ref|ZP_02472058.1| adenylylsulfate kinase [Burkholderia pseudomallei B7210] gi|167903516|ref|ZP_02490721.1| adenylylsulfate kinase [Burkholderia pseudomallei NCTC 13177] gi|217421228|ref|ZP_03452733.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 576] gi|242314505|ref|ZP_04813521.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1106b] gi|254178701|ref|ZP_04885356.1| adenylylsulfate kinase [Burkholderia mallei ATCC 10399] gi|254184300|ref|ZP_04890890.1| adenylylsulfate kinase [Burkholderia pseudomallei 1655] gi|254195909|ref|ZP_04902335.1| adenylylsulfate kinase [Burkholderia pseudomallei S13] gi|254199319|ref|ZP_04905685.1| adenylylsulfate kinase [Burkholderia mallei FMH] gi|254205632|ref|ZP_04911984.1| adenylylsulfate kinase [Burkholderia mallei JHU] gi|254258274|ref|ZP_04949328.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1710a] gi|254357788|ref|ZP_04974061.1| adenylylsulfate kinase [Burkholderia mallei 2002721280] gi|121229272|gb|ABM51790.1| adenylylsulfate kinase [Burkholderia mallei SAVP1] gi|124292215|gb|ABN01484.1| adenylyl-sulfate kinase [Burkholderia mallei NCTC 10229] gi|126219878|gb|ABN83384.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 668] gi|126228566|gb|ABN92106.1| adenylylsulfate kinase [Burkholderia pseudomallei 1106a] gi|126242309|gb|ABO05402.1| adenylyl-sulfate kinase [Burkholderia mallei NCTC 10247] gi|134250977|gb|EBA51056.1| adenylylsulfate kinase [Burkholderia pseudomallei 305] gi|147748915|gb|EDK55989.1| adenylylsulfate kinase [Burkholderia mallei FMH] gi|147753075|gb|EDK60140.1| adenylylsulfate kinase [Burkholderia mallei JHU] gi|148026915|gb|EDK84936.1| adenylylsulfate kinase [Burkholderia mallei 2002721280] gi|160699740|gb|EDP89710.1| adenylylsulfate kinase [Burkholderia mallei ATCC 10399] gi|169652654|gb|EDS85347.1| adenylylsulfate kinase [Burkholderia pseudomallei S13] gi|184214831|gb|EDU11874.1| adenylylsulfate kinase [Burkholderia pseudomallei 1655] gi|217396640|gb|EEC36657.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 576] gi|238521577|gb|EEP85027.1| adenylyl-sulfate kinase [Burkholderia mallei GB8 horse 4] gi|242137744|gb|EES24146.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1106b] gi|243060689|gb|EES42875.1| adenylyl-sulfate kinase [Burkholderia mallei PRL-20] gi|254216963|gb|EET06347.1| adenylyl-sulfate kinase [Burkholderia pseudomallei 1710a] Length = 206 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|313157223|gb|EFR56653.1| deoxynucleoside kinase [Alistipes sp. HGB5] Length = 218 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 25/161 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ G G+GKTT +L + K+Y E + + + Sbjct: 15 MYIAIAGNIGSGKTTLTQILTKRYNAKSY----LEECNNPYIGDFYEDMNRWSFNLQM-- 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG--KILLCDR--FLDS-----SYAYQGERDSSQHL 115 F +R+ L +G ++ DR + D+ + G + Sbjct: 69 -----YFLGSRIQQT----MDMLSDGGSGVIFQDRTVYEDAHIFAGNLHEMGLMPTRDIE 119 Query: 116 FLDSLQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRE 155 + + + + PD I L V + +++ R E Sbjct: 120 TYMKIFRLVTELIPKPDLLIYLKASVPTLISQIRKRGREYE 160 >gi|288923975|ref|ZP_06418047.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f] gi|288344680|gb|EFC79137.1| sulfate adenylyltransferase, large subunit [Frankia sp. EUN1f] Length = 640 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 34/144 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L + + + LL G + Sbjct: 468 FTGLSGAGKSTIANLVEKRLHDQGHHTY-----------------LLDGDNIRHGLNKDL 510 Query: 69 IVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ + A G I+L S + LD + + Sbjct: 511 GFTDADRVENIRRIAEVARLMADAGLIVLT-----SFISPFRAERQLARDLLDDGEFVE- 564 Query: 126 QEVMPDCTIILDLPVDIGLKRVQN 149 + +D P+D+ R + Sbjct: 565 --------VFVDTPLDVAETRDRK 580 >gi|256843094|ref|ZP_05548582.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|256850255|ref|ZP_05555684.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] gi|262046352|ref|ZP_06019314.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|312977279|ref|ZP_07789027.1| putative kinase [Lactobacillus crispatus CTV-05] gi|256614514|gb|EEU19715.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN] gi|256712892|gb|EEU27884.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US] gi|260573223|gb|EEX29781.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US] gi|310895710|gb|EFQ44776.1| putative kinase [Lactobacillus crispatus CTV-05] Length = 166 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 43/152 (28%), Gaps = 33/152 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S I G G+GKTT + R L + P T E + Sbjct: 1 MTS-KLIIIRGNSGSGKTTLSKEIHRRLPHNTLLI-----PQDTVRREMLN--VKDGEKT 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ H I ++ K Y SQ LF D + Sbjct: 53 FALPLLENLLEYGYH--HCSYTILEGILNAKW------------YADLFKKSQQLFGDQI 98 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D+P + +KR + R+ Sbjct: 99 YAY-----------YFDIPFEETMKRHKTRHE 119 >gi|123433828|ref|XP_001308688.1| Dynein heavy chain family protein [Trichomonas vaginalis G3] gi|121890380|gb|EAX95758.1| Dynein heavy chain family protein [Trichomonas vaginalis G3] Length = 2829 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 26/118 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G GKTT +LL++ L + V P P R LL + Sbjct: 570 VVLTGPSGCGKTTLWTLLQKTLDKIGVKVDIEVMNPKSMP-----RQRLLGRVDYDTREW 624 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++ AAR A ++CD +++SL + Sbjct: 625 FDGVLTRAARRA-------VASSNRTWIVCD-------------GDIDPEWIESLNSV 662 >gi|323978940|gb|EGB74020.1| ATP-binding protein YghR [Escherichia coli TW10509] Length = 252 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 32/172 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRFPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMVNLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 Y G + ++ +E P+ I L + +D + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 193 >gi|300726987|ref|ZP_07060407.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella bryantii B14] gi|299775710|gb|EFI72300.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Prevotella bryantii B14] Length = 209 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 44/187 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLS---CGVDEF 62 I G G+GKTT LL + G TP E+ + LS + + Sbjct: 3 IVIAGNIGSGKTTLTKLLAQH-------------YGWTPRFESVENNPYLSDYYKDIPRW 49 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD----------SSYAYQGERDSS 112 E D + K ++ DR + + +RD Sbjct: 50 SFNMEIFFLKQRFRDLLA-----INRSDKTIVQDRSIYEGVHVFATTNKEMGHMSDRDFE 104 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------DYFER 164 ++ L + + + PD I L V + ++ R E A D +E Sbjct: 105 TYIGL--FESMMMIAKQPDLMIYLRASVPHLVANIEKRGRDYEQAMPLEYLQNLNDRYE- 161 Query: 165 KDVMIHE 171 D + H+ Sbjct: 162 -DFVFHK 167 >gi|301101074|ref|XP_002899626.1| dynein heavy chain [Phytophthora infestans T30-4] gi|262103934|gb|EEY61986.1| dynein heavy chain [Phytophthora infestans T30-4] Length = 4373 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 24/114 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G G+GK+T +L++ L + V P P R LL + + + Sbjct: 2044 GPSGSGKSTVWLVLQQALIKCGQLVKTHVMNPKSMP-----RERLLGHMDLDTREWEDGV 2098 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AAAR V++ ++CD +++SL + Sbjct: 2099 LTAAAR-----QVVKEPENVRSWIICD-------------GDVDPEWIESLNSV 2134 >gi|241895639|ref|ZP_04782935.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313] gi|241871217|gb|EER74968.1| deoxyguanosine kinase [Weissella paramesenteroides ATCC 33313] Length = 212 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 71/227 (31%), Gaps = 48/227 (21%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT L+ + L+ + EP E L ++G + Sbjct: 10 GVGKTTLTDLIAKHLKTQ-----AFFEP----VGENPVLPLYYADPKQYGFLLQIYFLNK 60 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119 +I+ AL + +L DR + D+ + + R+ +D Sbjct: 61 RFA-----MIKKALSDDNNVL-DRSIYEDALFTQENHREGNISDAELNVYMTLLKNMMDE 114 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +Q + PD + D D L R++ R E FE + RQ + Sbjct: 115 IQTMKKG--RPDLMVFADADFDTILYRIKKRGRDYEQ-----FEDNADL-----RQYYFK 162 Query: 180 IARNQPDRCHIVDSA-------HSFQSVATNILNIVWELVQKRVSPL 219 + D++ + + IV + + R+ L Sbjct: 163 MWSAYQKWYADYDASPKMKIDLQKYDLENKDSQKIVLQQIDDRLKEL 209 >gi|167720441|ref|ZP_02403677.1| adenylylsulfate kinase [Burkholderia pseudomallei DM98] Length = 193 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 20 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|289741607|gb|ADD19551.1| guanylate kinase [Glossina morsitans morsitans] Length = 216 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 49/218 (22%) Query: 11 GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G G+GKTT ++ L K F + V H TR+P + + + + A E Sbjct: 26 GPSGSGKTTLLNRLFKEFPNTFGFSVSHTTRKPRPAEQDGVHYNFVEKDVMKKMIANGEF 85 Query: 69 I---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 I F+ + +R GK+ + D + ++ +++ + Sbjct: 86 IESATFSGNMYGTSKEAVRKIQAAGKVCILD---------------IEPQGVEQIKKTDL 130 Query: 126 QEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 ++ I + P + KR++ R + E + L AR Sbjct: 131 NPIL----IY-NNPPSIEALEKRLRKRNTESEETLNNR----------------LAAARE 169 Query: 184 Q------PDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + P H + + + + + ++ + Sbjct: 170 EIAYGLTPGNFHKIINNIDIDEAYEDFRSYLLAELKAQ 207 >gi|188584857|ref|YP_001916402.1| Adenylate kinase [Natranaerobius thermophilus JW/NM-WN-LF] gi|229487586|sp|B2A4G2|KAD_NATTJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|179349544|gb|ACB83814.1| Adenylate kinase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 214 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 41/236 (17%), Positives = 76/236 (32%), Gaps = 60/236 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T L + L DV + R + E G EA Sbjct: 3 IILMGPPGAGKGTQAEKLSKEL-----DV------PHIATGDIFRKAV--SEGTELGKEA 49 Query: 67 EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 ++ + A + D V ++ L + ++G + + + Sbjct: 50 KSYMDAGQLVPDDVVIGIVEERLKKPD------------CHEGFILDGFPRTVTQAE--A 95 Query: 125 VQEVMPD--CT--IILDLPVDIGLKRVQNRYSLRESACLDYF------------ERKDVM 168 + +V+ D T + +D+ D + R+ R R+ + E + + Sbjct: 96 LDKVLSDNPLTAAVYIDVSKDELIDRLSGRRICRKCGKSYHIKFNPPQVRGVCDEDEGEL 155 Query: 169 IHE--------KRR-QIFLD----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209 K R +++L+ + DR +D S + V +IL V Sbjct: 156 YQRDDDNEETAKERLEVYLENTQPLVEYYQDRGILKKIDGTKSPEEVFRDILKAVQ 211 >gi|57525607|ref|NP_001003633.1| GPN-loop GTPase 1 [Danio rerio] gi|50417230|gb|AAH78195.1| Zgc:100927 [Danio rerio] Length = 349 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 11/94 (11%) Query: 14 GAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGVDEF 62 G+GKTT + L +L K VH P + + V+ G+ Sbjct: 3 GSGKTTFVQRLTAYLHSKKTPPYVINLDPAVHEVPFPANIDIRDTVNYKEVMKQYGLGPN 62 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I + +L D Sbjct: 63 GGIVTSLNLFATRFDQVMKFIEKKQSNHEYVLID 96 >gi|260060603|ref|YP_003193683.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Robiginitalea biformata HTCC2501] gi|88784733|gb|EAR15902.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Robiginitalea biformata HTCC2501] Length = 385 Score = 40.8 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 60/190 (31%), Gaps = 20/190 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKTT + N + + R + + E Sbjct: 181 YIAIEGNIGAGKTTLAGKIAE---DMNAKLILERFADNPFLPKFYQDQARYAFPLEMS-- 235 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124 F A R R + + ++ D + S + L L + Sbjct: 236 -----FLAERYQQFTEDTRQLDLFKRFMVSDYDIYKSLIFARITLQEDEFLLYRKLFTLM 290 Query: 125 VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 QEV P + L D L+++ NR E EK + + D RN Sbjct: 291 YQEVRKPRLYVYLYQHTDRLLRQIANRGRDYERGIP-------AEYLEKIHRGYFDFMRN 343 Query: 184 QPD-RCHIVD 192 P+ ++D Sbjct: 344 SPELNTLVID 353 >gi|313676872|ref|YP_004054868.1| deoxynucleoside kinase [Marivirga tractuosa DSM 4126] gi|312943570|gb|ADR22760.1| deoxynucleoside kinase [Marivirga tractuosa DSM 4126] Length = 211 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 60/202 (29%), Gaps = 38/202 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT + L T + L + A Sbjct: 7 IAIAGNIGAGKTTLANKLSHH------------YGWKTEFEAVEDNPYLVDFYKDMKQWA 54 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122 + F +RL V+ + ++ DR + D + +S D Sbjct: 55 FHLQVYFLNSRLQQVKRI----RESEHTVVQDRSIYEDCYVFAKNLHESGNMSDRDYHNY 110 Query: 123 ISVQEVM------PDCTIIL--DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + + + M PD I L D+P +G E DY E + + Sbjct: 111 LELFDSMAAVITPPDLLIYLRADIPKLVGQ---------IEKRGRDYEETIRIDYLKNLN 161 Query: 175 QIFLDIARNQP-DRCHIVDSAH 195 + + + + I+D Sbjct: 162 KHYEAWVKQYDIGKLIIIDVNQ 183 >gi|297568266|ref|YP_003689610.1| guanylate kinase [Desulfurivibrio alkaliphilus AHT2] gi|296924181|gb|ADH84991.1| guanylate kinase [Desulfurivibrio alkaliphilus AHT2] Length = 203 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 54/180 (30%), Gaps = 31/180 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 MN G + GAGKTT + + + V H TR P H + Sbjct: 1 MNKGCLLVVSAPSGAGKTTLLKRILADTPGIGFSVSHTTRAPRAGEENGVDYHFI---DR 57 Query: 60 DEFGAEAEAIVFAAARLDH------VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 EF EA F H ++ AL+ G+ +L D QG R + Sbjct: 58 QEFTRRREADDFLEWAEVHGNFYGTSREAVQQALIRGEDILLD------IDVQGARQLKE 111 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 +++ + P + +R+ R + E + E Sbjct: 112 QTGVEA-------------VFLFIAPPSARVLAQRLHGRGTDSREVIELRLENARREMQE 158 >gi|227891816|ref|ZP_04009621.1| ATPase of the AAA+ class [Lactobacillus salivarius ATCC 11741] gi|227866381|gb|EEJ73802.1| ATPase of the AAA+ class [Lactobacillus salivarius ATCC 11741] Length = 535 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62 FEG G GKTT ++ R V T+ E G + LS ++E Sbjct: 315 FEGPPGTGKTTVARIVARLFYALGILENTTVIETKRNELEGKWVGD------LSGKINEK 368 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 A V + N P +GK ++ Sbjct: 369 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 399 >gi|118431358|ref|NP_147777.2| adenylyl-sulfate kinase [Aeropyrum pernix K1] gi|150421535|sp|Q9YCR6|CYSC_AERPE RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|116062682|dbj|BAA80181.2| adenylyl-sulfate kinase [Aeropyrum pernix K1] Length = 183 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 18/121 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ + G+ G+GKTT + L LQ++ Y V V + AR + Sbjct: 9 KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVL-------DGDWARTTVSEGAGFT- 60 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSL 120 E + L + + R G I++C S Y A R + + L Sbjct: 61 --REERL----RHLKRIAWIARLLARNGVIVIC--SFVSPYKQARNMVRRIVEEEGIPFL 112 Query: 121 Q 121 + Sbjct: 113 E 113 >gi|109947541|ref|YP_664769.1| guanylate kinase [Helicobacter acinonychis str. Sheeba] gi|109714762|emb|CAJ99770.1| gmk [Helicobacter acinonychis str. Sheeba] Length = 200 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 7/97 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63 + I G GAGK+T L+ +Q+ + + TR+P + + +S + G Sbjct: 1 MLI-LSGPSGAGKSTLTKYLQEKIQKTYFSLSTTTRKPREGEI-DGLHYNFVSEEEFKQG 58 Query: 64 AEAEAIVFAAARLDHV----ENVIRPALMEGKILLCD 96 E + A +H + ++ AL EGKI++ D Sbjct: 59 IEKGQFLEWAIVHNHYYGTSKALVEKALKEGKIVIFD 95 >gi|311993359|ref|YP_004010224.1| hypothetical protein Acj9p087 [Acinetobacter phage Acj9] gi|295917316|gb|ADG59987.1| conserved hypothetical phage protein [Acinetobacter phage Acj9] Length = 182 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 23/112 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I EG + +GKTT I L + PG R+ Sbjct: 3 RLIVVEGPDNSGKTTFIQHL------------LNNFPGTEVIQFPKRNT--DKTRFNIIT 48 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + +F + L + K+ + DR S+ Y+ R S+ Sbjct: 49 RNDLAIF---------ETMLDYLPQDKVFILDRSYISNAVYERLRGDSKWPM 91 >gi|254467765|ref|ZP_05081172.1| Uma3 [Rhodobacterales bacterium Y4I] gi|206684202|gb|EDZ44688.1| Uma3 [Rhodobacterales bacterium Y4I] Length = 508 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 21/149 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++ G+ G GKTT + + L+ VH+ ++ R LL E Sbjct: 334 RLVAVGGLSGTGKTTVAARVAPLLRPAPGAVHL--------RSDVERKALLGAAPLERLP 385 Query: 65 EAEAIVFAAARLD-HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A AR+ + AL G ++ D + F D +Q + Sbjct: 386 AAGYGPEVTARVYARLLERAEQALRAGHSVILD------------ATFLEAEFRDRVQAL 433 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 + + +P I L + +R+ R Sbjct: 434 ADRLRVPFAGIWLQGDPAVLEQRIAARRG 462 >gi|315230023|ref|YP_004070459.1| signal recognition particle [Thermococcus barophilus MP] gi|315183051|gb|ADT83236.1| signal recognition particle [Thermococcus barophilus MP] Length = 448 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 17/127 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 GI+G+GKTT ++ L R+ Q++ Y V + P A + ++ ++ FG E Sbjct: 107 GIQGSGKTTTVAKLARYFQKRGYKVGLVCSDTWRPGAYHQLKQLVEPYSIEVFGDPNE-- 164 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + + + +G I++ D R + ++ +++I + Sbjct: 165 ---KDAVRLAKEGVEYFKHKGVDIIIVD---------SAGRHKEEKSLIEEMKQI-SDAI 211 Query: 129 MPDCTII 135 P I+ Sbjct: 212 NPHEVIL 218 >gi|118587102|ref|ZP_01544532.1| ABC transporter, ATP-binding protein [Oenococcus oeni ATCC BAA-1163] gi|118432512|gb|EAV39248.1| ABC transporter, ATP-binding protein [Oenococcus oeni ATCC BAA-1163] Length = 295 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 32/81 (39%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N+G ++F G GAGK+T I +L L+ + V E + V +D+ Sbjct: 28 NAGSLVAFLGPNGAGKSTTIKMLTTILRPSGGKILVDGEESPEAIRKNIGIVFQESILDK 87 Query: 62 FGAEAEAIVFAAARLDHVENV 82 E ++F + + Sbjct: 88 ELTVRENLLFRSNLYQRLPKK 108 >gi|323339737|ref|ZP_08080007.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644] gi|323092816|gb|EFZ35418.1| deoxyguanosine kinase [Lactobacillus ruminis ATCC 25644] Length = 242 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 37/213 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ GI G+GK++ +L R L + + + G A R D Sbjct: 2 ITLAGIIGSGKSSLTEILSRELGSIPFYEPVEDNPVLPLFYKGNELAAKKRQA---GEKD 58 Query: 61 EFGAEAEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQG 107 A + F R ++ ++ + DR + D+ + A Q Sbjct: 59 ATNPYAYLLQTFFLNRRFMMMKKALQSRNN-----ILDRSIYEDAMFMRMNTEMGNATQV 113 Query: 108 ERDSSQHLFLDSLQEISVQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 E Q L + L+E++ V+P + I++ + D + R++ R E D Sbjct: 114 EYSIYQELLTNILEELNH--VVPSNDYNLMILIKVSYDTMVSRIKKRGREYEQIEKDP-- 169 Query: 164 RKDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH 195 + + + + + + N ++D Sbjct: 170 -SLIDYYGRLLKYYEEFEENYNQSEMLVIDGDK 201 >gi|161528039|ref|YP_001581865.1| GTP-binding signal recognition particle [Nitrosopumilus maritimus SCM1] gi|160339340|gb|ABX12427.1| GTP-binding signal recognition particle SRP54 G- domain [Nitrosopumilus maritimus SCM1] Length = 442 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 21/41 (51%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 I GI+G+GKTT S L +FL + Y V V P A Sbjct: 102 IILLGIQGSGKTTVASKLAKFLTGQGYKVGVVGADTYRPGA 142 >gi|15615947|ref|NP_244251.1| adenylylsulfate kinase [Bacillus halodurans C-125] gi|12230018|sp|Q9K7H6|CYSC2_BACHD RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|10176008|dbj|BAB07104.1| adenylylsulfate kinase [Bacillus halodurans C-125] Length = 208 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 20/97 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I F G+ G+GK+T + ++ L ++ V+ +L Sbjct: 29 HKSRMIWFTGLSGSGKSTIANAVQAELFKRGIQVY-----------------VLDGDNLR 71 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 G A+ R +++ V + + G ++L Sbjct: 72 HGLNADLSFSMEDRKENIRRTAEVGKLFVDAGLVVLA 108 >gi|67923558|ref|ZP_00517031.1| Adenylate kinase, subfamily [Crocosphaera watsonii WH 8501] gi|67854584|gb|EAM49870.1| Adenylate kinase, subfamily [Crocosphaera watsonii WH 8501] Length = 190 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 78/226 (34%), Gaps = 55/226 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55 M++G + F G G+GK T L + L N T E R + L Sbjct: 1 MSTGKGLIFLGPPGSGKGTQAQELSKEL---NIPHIST--------GEMLRAAIAKQTSL 49 Query: 56 SCGVDEFGAEAEA----IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + + E ++ +E ++ E +L D F R+ Sbjct: 50 GQKAQVYMDKGELVPDELLLG-----LIEERLKEKDAENGWIL-DGF---------PRNV 94 Query: 112 SQHLFLDS-LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 +Q FLD L +++ I LD+P + + R+ R +E D + Sbjct: 95 AQAEFLDKLLHKLAKFSEQ---AINLDVPDPVIIDRLLLRGQ-KEGRKDD-----NEETI 145 Query: 171 EKRRQIFLDIARNQP--------DRCHIVDSAHSFQSVATNILNIV 208 +R +++ + + QP DR VD Q V + +V Sbjct: 146 RRRLEVYRE--KTQPVLDYYRQQDRLSSVDGNRELQEVTKTLKAVV 189 >gi|296087310|emb|CBI33684.3| unnamed protein product [Vitis vinifera] Length = 274 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 28/145 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L R L + + R + Sbjct: 95 QKGCVIWITGLSGSGKSTLACALSRALHSRG-------NLTYVLDGDNVR----HGLNRD 143 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE R +++ + A + F DS S D+ + Sbjct: 144 LSFRAE------DRAENIRRIGEVAKL---------FSDSGIICIASLISPYRKDRDACR 188 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 + + + +D+P+++ +R Sbjct: 189 AMLSEGNF--IEVFMDIPLEVCEER 211 >gi|7330010|gb|AAF59999.1|AF210726_20 thymidine kinase [Rhesus monkey rhadinovirus H26-95] Length = 557 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 29/194 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLL 55 + I EG+ G GKTT ++ + + ++N V EP + + R ++ Sbjct: 228 RNAFLIYLEGVMGVGKTTLLNSMTGMVPQEN--VLSCPEPMKFWTCVYSNCLKEQRSIVK 285 Query: 56 SCGVDEFGAEAEAI-------VFAAARLDHVENVIRPAL-MEGK-----ILLCDRFLDSS 102 + A + A + ++P L G ++ DR L S+ Sbjct: 286 QGTHGKSITSARVYACQSKFALPFRATAAGIGRNLQPWLVGNGSTKPANWIVFDRHLLSA 345 Query: 103 -----YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + + L S + D ++L L +R+Q+R E Sbjct: 346 TVVFPLVHVKYNRLTPDHLFQILSLFSAHDG--DVVVLLTLNSSEAHRRIQSRGRKEEKG 403 Query: 158 -CLDYFERKDVMIH 170 +Y + H Sbjct: 404 ITQNYLRQVAWAYH 417 >gi|46519363|gb|AAT00011.1| JM34 [Macaca fuscata rhadinovirus] Length = 556 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 29/194 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLL 55 + I EG+ G GKTT ++ + + ++N V EP + + R ++ Sbjct: 227 RNAFLIYLEGVMGVGKTTLLNSMTGMVPQEN--VLSCPEPMKFWTCVYSNCLKEQRSIVK 284 Query: 56 SCGVDEFGAEAEAI-------VFAAARLDHVENVIRPAL-MEGK-----ILLCDRFLDSS 102 + A + A + ++P L G ++ DR L S+ Sbjct: 285 QGTHGKSITSARVYACQSKFALPFRATAAGIGRNLQPWLVGNGSTKPANWIVFDRHLLSA 344 Query: 103 -----YAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 + + L S + D ++L L +R+Q+R E Sbjct: 345 TVVFPLVHVKYNRLTPDHLFQILSLFSAHDG--DVVVLLTLNSSEAHRRIQSRGRKEEKG 402 Query: 158 -CLDYFERKDVMIH 170 +Y + H Sbjct: 403 ITQNYLRQVAWAYH 416 >gi|116490777|ref|YP_810321.1| ABC-type multidrug transport system, ATPase component [Oenococcus oeni PSU-1] gi|290890207|ref|ZP_06553288.1| hypothetical protein AWRIB429_0678 [Oenococcus oeni AWRIB429] gi|116091502|gb|ABJ56656.1| ABC-type multidrug transport system, ATPase component [Oenococcus oeni PSU-1] gi|290480153|gb|EFD88796.1| hypothetical protein AWRIB429_0678 [Oenococcus oeni AWRIB429] Length = 295 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 32/81 (39%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N+G ++F G GAGK+T I +L L+ + V E + V +D+ Sbjct: 28 NAGSLVAFLGPNGAGKSTTIKMLTTILRPSGGKILVDGEESPEAIRKNIGIVFQESILDK 87 Query: 62 FGAEAEAIVFAAARLDHVENV 82 E ++F + + Sbjct: 88 ELTVRENLLFRSNLYQRLPKK 108 >gi|325474458|gb|EGC77645.1| cytidylate kinase/ribosomal protein S1 [Treponema denticola F0402] Length = 811 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G+GK+T +L L Sbjct: 1 MIIAIDGPAGSGKSTLAKMLAEHLN 25 >gi|311031369|ref|ZP_07709459.1| dephospho-CoA kinase [Bacillus sp. m3-13] Length = 200 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 56/224 (25%) Query: 11 GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDE 61 G+ G +GK+T ++L+ + + E G E + +L+ Sbjct: 6 GLTGGIASGKSTVANMLRDKNIPIVDADIVAREVVEIGTDTYKELVKEFGTEILNDDKTL 65 Query: 62 FGAEAEAIVFA-------AARLDH------VENVIRPALMEG-KILLCDRFLDSSYAYQG 107 + +I+F + H ++ + L +G ++++ D Sbjct: 66 NRPKLGSIIFQDETKRQKLNNIMHPSIRTSMKEKTQKFLEDGHEVVVMD----------- 114 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV 167 LF L + D T+++ + LKR+ R L E D R + Sbjct: 115 ----IPLLFESKLTHLV------DKTLLVYVTEATQLKRLMERNDLSEKEATDRI-RSQM 163 Query: 168 MIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + EK ++ I+D+ S + I+ E Sbjct: 164 PLTEKV-----KLSHA------IIDNNGSVTKTEQQLNQILKEW 196 >gi|256545175|ref|ZP_05472541.1| guanylate kinase [Anaerococcus vaginalis ATCC 51170] gi|256399216|gb|EEU12827.1| guanylate kinase [Anaerococcus vaginalis ATCC 51170] Length = 198 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 4/98 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G + G G GK T + L + Y V TR+ + Sbjct: 1 MKKGFLLVISGPSGVGKGTVLHDLMNTQKNLVYSVSVTTRKQRPGEIEGVSYFFKSHEEF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94 ++ E + + +A ++ ++ + + EGKI++ Sbjct: 61 EKMIEEDKFLEYAKVHDNYYGTPKDFVEEKINEGKIVI 98 >gi|229116054|ref|ZP_04245447.1| uridine kinase [Bacillus cereus Rock1-3] gi|228667389|gb|EEL22838.1| uridine kinase [Bacillus cereus Rock1-3] Length = 196 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 35/212 (16%) Query: 1 MNSGLF-ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L + A+ + + Sbjct: 11 MNRKTIVITIAAVSGGGKTTITESLTHELTNS-KALFFDSYNFDNYPADICKWI-----D 64 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D + + + H+ IR + ++ I+ D +AY Sbjct: 65 DGANYDEWVLTPLIHDIQHL---IRDSKLDYIIV------DYPFAY-------------- 101 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L Q + D TI +D P+DI + R R ++ + + K M H R+ +L+ Sbjct: 102 LNREMGQFI--DVTIFIDTPLDIAMARRILRDFKEDTMSEIHNDLKHYMAHA--RKAYLE 157 Query: 180 IARN-QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D + S + +++ + Sbjct: 158 AIHTVKPNSDIVLDGSFSVSEIIDHVVEELDR 189 >gi|108798020|ref|YP_638217.1| adenylate kinase [Mycobacterium sp. MCS] gi|119867115|ref|YP_937067.1| adenylate kinase [Mycobacterium sp. KMS] gi|126433682|ref|YP_001069373.1| adenylate kinase [Mycobacterium sp. JLS] gi|123369667|sp|Q1BD73|KAD_MYCSS RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|166980334|sp|A3PVF5|KAD_MYCSJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|166980335|sp|A1UBR9|KAD_MYCSK RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|108768439|gb|ABG07161.1| Adenylate kinase [Mycobacterium sp. MCS] gi|119693204|gb|ABL90277.1| Adenylate kinase [Mycobacterium sp. KMS] gi|126233482|gb|ABN96882.1| Adenylate kinase [Mycobacterium sp. JLS] Length = 181 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 65/215 (30%), Gaps = 51/215 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + L L T + R + E G EA Sbjct: 3 IVLLGPPGAGKGTQAAKLADKL---GVPHIST--------GDLFRDNI--TNETELGVEA 49 Query: 67 EAIVFAAARL------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + A + VE+ I + +L D + S Q E Sbjct: 50 KRYLDAGDLVPSSLTNALVEDRIDQDDAKNGFIL-DGYPRS--VEQAEALGDM------- 99 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYF-----ERKDVMIHEKR 173 ++ + + D I + D L R++ R ++ L+ E ++ H + Sbjct: 100 --LAARNLSLDAVIEFRVSEDELLSRLKGRGRADDTEEVILNRMKVYRDETAPLLDHYR- 156 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 ++ VD+ S V L + Sbjct: 157 ----AEL--------KTVDAVGSLDEVFARALQAL 179 >gi|114051493|ref|NP_001040302.1| guanylate kinase [Bombyx mori] gi|87248153|gb|ABD36129.1| guanylate kinase [Bombyx mori] Length = 207 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 43/214 (20%) Query: 11 GIEGAGKTTHIS-LLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G G+GK+T + LLK F + + V H TR P A E +++ E Sbjct: 13 GPSGSGKSTLLKRLLKEFPDKFGFSVSHTTRAP---RAGEKNGVHYHFTNLNDMSTAIE- 68 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS----LQEIS 124 I A+ G I + S A R + + LD +++I Sbjct: 69 ----------KGEFIETAIFSGNI-----YGTSKKAVDDVRRTGKICVLDIEMEGVKQIK 113 Query: 125 VQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDI 180 ++ P + +P D +R++ R + +E + E R+++ + Sbjct: 114 RTDLDPLLVFV--MPPSIDELERRLRARNTEQEDSLKKRLETARREIKFGQ--------- 162 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P +I+ + + + + + ++ Sbjct: 163 ---EPGNFNIIILNDNLDKAYNELRDFITQNIED 193 >gi|42527583|ref|NP_972681.1| cytidylate kinase/ribosomal protein S1 [Treponema denticola ATCC 35405] gi|41818168|gb|AAS12592.1| cytidylate kinase/ribosomal protein S1 [Treponema denticola ATCC 35405] Length = 811 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G+GK+T +L L Sbjct: 1 MIIAIDGPAGSGKSTLAKMLAEHLN 25 >gi|304319969|ref|YP_003853612.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Parvularcula bermudensis HTCC2503] gi|303298872|gb|ADM08471.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Parvularcula bermudensis HTCC2503] Length = 637 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 34/149 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + F G+ GAGK+T +L+++ L + + +L Sbjct: 459 MQRPALLWFTGLSGAGKSTIANLVEKRLYDRGRHTY-----------------ILDGDNV 501 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G + A R++++ V A + G I+L A+ + + + Sbjct: 502 RHGLNKDLGFTDADRVENIRRVAETAKLMVDAGLIVLS--------AFISPFRTERQMAR 553 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146 L E + + +D P+++ +R Sbjct: 554 SLLGE---GKF---IEVFIDTPLNVAEER 576 >gi|307354830|ref|YP_003895881.1| shikimate 5-dehydrogenase [Methanoplanus petrolearius DSM 11571] gi|307158063|gb|ADN37443.1| shikimate 5-dehydrogenase [Methanoplanus petrolearius DSM 11571] Length = 459 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 64/201 (31%), Gaps = 48/201 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GKTT +L R + T E + G D Sbjct: 5 IILTGFRGSGKTTVGEMLSE---RTGLPFYDTDEMVEAECRMPIPEIFSKEGED------ 55 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 A R + VIR +E I+ S+ G + +L+ Sbjct: 56 -----AFRRAE--SKVIRELNLEPCIV-------ST----GGGLILNPENVMNLRR---- 93 Query: 127 EVMPD-CTIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 D +L++ ++ R+ R SL + + E ++ RR + +A + Sbjct: 94 ----DSLVFLLNVSPELAGMRISGSERPSLTGKSVGE--EAAGLI---SRRMPYYRMASD 144 Query: 184 QPDRCHIVDSAHSFQSVATNI 204 +D+ + + + I Sbjct: 145 F-----CIDAGLAPEEICDRI 160 >gi|194697436|gb|ACF82802.1| unknown [Zea mays] gi|195610014|gb|ACG26837.1| adenylate kinase [Zea mays] Length = 286 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 63/238 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G +GK T L+K Q + + R + + + A+ Sbjct: 74 ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 120 Query: 69 IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + V + I +P E L D + S SQ + L+ Sbjct: 121 ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 167 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164 +L+ + PD I+LD+P ++ ++RV R + Sbjct: 168 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 221 Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + EK Q + + V + +V I ++ +++K+ Sbjct: 222 RFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 279 >gi|170578794|ref|XP_001894548.1| hypothetical protein Bm1_15440 [Brugia malayi] gi|158598800|gb|EDP36612.1| hypothetical protein Bm1_15440 [Brugia malayi] Length = 379 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 3/121 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT L+ F + + V+ E + LS ++ Sbjct: 16 IVLTGGPCGGKTTGQERLRTFFEEIGWKVYTVPETANILLGGGVKFAELSK--EQCYRFQ 73 Query: 67 EAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A R++ V N + E +++CDR AY ++ ++ L +L + S+ Sbjct: 74 KDMLLALLRIEAVFFNQADVSNAERILIICDRGAMDPAAYIDKKSWNEMLKETNLDQFSL 133 Query: 126 Q 126 + Sbjct: 134 R 134 >gi|158431287|pdb|2YVU|A Chain A, Crystal Structure Of Ape1195 gi|158431288|pdb|2YVU|B Chain B, Crystal Structure Of Ape1195 Length = 186 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 18/121 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ + G+ G+GKTT + L LQ++ Y V V + AR + Sbjct: 12 KGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVL-------DGDWARTTVSEGAGFT- 63 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSL 120 E + L + + R G I++C S Y A R + + L Sbjct: 64 --REERL----RHLKRIAWIARLLARNGVIVIC--SFVSPYKQARNMVRRIVEEEGIPFL 115 Query: 121 Q 121 + Sbjct: 116 E 116 >gi|86147233|ref|ZP_01065548.1| adenylylsulfate kinase [Vibrio sp. MED222] gi|85834948|gb|EAQ53091.1| adenylylsulfate kinase [Vibrio sp. MED222] Length = 215 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + ++ L + LL G + Sbjct: 42 FTGLSGSGKSTVANAVESKLLQMGKH-----------------SYLLDGDNVRHGLNQDL 84 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + R++++ V + + G I+L S ++E+ Sbjct: 85 GFSDSDRIENIRRIGEVAKLFVDAGNIVLT------------AFISPFISDRQQVRELVT 132 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + + +D P+++ R Sbjct: 133 EGEF--LEVFVDTPLEVCEAR 151 >gi|313888470|ref|ZP_07822137.1| guanylate kinase [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845499|gb|EFR32893.1| guanylate kinase [Peptoniphilus harei ACS-146-V-Sch2b] Length = 206 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 69/216 (31%), Gaps = 46/216 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLL 55 M+ G + G G+GK T L + N D+ TR P Sbjct: 1 MDGGFLLVLSGPSGSGKGTVS----EALMKNNDDIIFSTSVTTRTPRPGEVNGENYFFAT 56 Query: 56 SCGVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 +E + E + A ++ + + + +G+I+L + +D A Q + Sbjct: 57 REEFEEMVEKDELLEHAFVHTNYYGTPKKFVFDEIEKGEIVLLE--IDVQGALQIKEKYK 114 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + I +P + +++R R++ D E + Sbjct: 115 EA------------------VFIFLIPP--TMDELRSRLVKRDTETEDEIE-------TR 147 Query: 173 RRQIFLDI-ARNQPDRCH---IVD-SAHSFQSVATN 203 R F ++ + D ++D + +++ Sbjct: 148 YRNAFRELDFVGEYDYFVINDVIDNAVKDIETIIAA 183 >gi|312127911|ref|YP_003992785.1| guanylate kinase [Caldicellulosiruptor hydrothermalis 108] gi|311777930|gb|ADQ07416.1| guanylate kinase [Caldicellulosiruptor hydrothermalis 108] Length = 199 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 50/227 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M GL I G G GK T + L + TR+P + Sbjct: 1 MREGLLIVISGPAGTGKGTVVGRLLEKNTNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + +A ++ ++ + AL +G ++ L Sbjct: 61 EEEIKNERFLEYAEYNNNYYGTPKDFVFEALEKGYDVI--------------------LE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +++ + +++V D +I LP + KR+ R + E E Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLVKRGTESEDEIRARLE----------- 149 Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215 IA+N+ P+ +++ + A I I+ E ++ R Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189 >gi|237814536|ref|ZP_04593534.1| fructose transport system kinase [Brucella abortus str. 2308 A] gi|237789373|gb|EEP63583.1| fructose transport system kinase [Brucella abortus str. 2308 A] Length = 250 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 59 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 118 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 119 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 171 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 172 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 208 >gi|118780184|ref|XP_309986.3| AGAP009317-PA [Anopheles gambiae str. PEST] gi|116131160|gb|EAA05792.3| AGAP009317-PA [Anopheles gambiae str. PEST] Length = 197 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 10/85 (11%), Positives = 30/85 (35%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 D + + + + R+ R + + D E R+ I P + Sbjct: 111 DIILYFECSNETLVARIMKRAAESSTVRADDNEETLKTRIATFRENTEKILVQYPTQLRR 170 Query: 191 VDSAHSFQSVATNILNIVWELVQKR 215 +++ + + + ++ + EL+ + Sbjct: 171 INAERAPEEIFADVEKSIDELLAAK 195 >gi|229170585|ref|ZP_04298233.1| hypothetical protein bcere0007_55010 [Bacillus cereus AH621] gi|228612934|gb|EEK70111.1| hypothetical protein bcere0007_55010 [Bacillus cereus AH621] Length = 282 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTAAKLINEILSQNKIEVELFLE 39 >gi|121606619|ref|YP_983948.1| arsenite-activated ATPase subunit ArsA [Polaromonas naphthalenivorans CJ2] gi|120595588|gb|ABM39027.1| arsenite efflux ATP-binding protein ArsA [Polaromonas naphthalenivorans CJ2] Length = 600 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M GL + G G GKTT S L L ++ + VH+T AE L + V Sbjct: 335 MGHGLIMVM-GKGGVGKTTIASALAVGLVQRGHSVHLTTTDPAAHVAETLNGSLPNLKVG 393 Query: 61 EFGAEAEAIVFAA 73 AE + A Sbjct: 394 RIDPRAETEAYIA 406 >gi|13471644|ref|NP_103210.1| gluconokinase [Mesorhizobium loti MAFF303099] gi|14022387|dbj|BAB48996.1| gluconokinase [Mesorhizobium loti MAFF303099] Length = 160 Score = 40.8 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 56/206 (27%), Gaps = 58/206 (28%) Query: 11 GIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G+ G GK+ L L + +H + E L +D G Sbjct: 2 GVAGCGKSAVGIALAAALDAVFIEGDRLHPPENVARMASGEPLTDQLREGWLDAIGER-- 59 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 I ++ EG+ ++ A + S + ++ Sbjct: 60 ---------------IATSIGEGQGVVA--------ACSALKRSHRER---------LRG 87 Query: 128 VMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP- 185 PD L++ +RV +R A L D A +P Sbjct: 88 FCPDIVFLYLEIDPTTARRRVASRKGHFMPASL-----VDSQF-----------AILEPP 131 Query: 186 ---DRCHIVDSAHSFQSVATNILNIV 208 +R +D+ + + ++ Sbjct: 132 GSDERALTIDATRPVADAVADAMRLL 157 >gi|291514603|emb|CBK63813.1| Deoxynucleoside kinases [Alistipes shahii WAL 8301] Length = 204 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 29/163 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 ++I+ G G+GKTT +L + YD E P + ++ Sbjct: 1 MYIAIAGNIGSGKTTLTQILTKR-----YDAKCYLEECDNP--------YIGDFYEDMNR 47 Query: 65 EAEAIV--FAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSS 112 A + F +R+ +I + ++ DR + D+ RD Sbjct: 48 WAFNLQISFLGSRIQQTMGMISDC--KSGVIFQDRTIYEDAHIFADNLHEMGLMATRDIE 105 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 ++ + L ++ PD I L V + +++ R E Sbjct: 106 TYMKIFRL--VTTLIPKPDLLIYLKASVPTLISQIRKRGREYE 146 >gi|296089470|emb|CBI39289.3| unnamed protein product [Vitis vinifera] Length = 361 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 73/232 (31%), Gaps = 43/232 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +GK T L+ + + +E R + Sbjct: 145 IMISGAPASGKGTQCELITKKHDLVHIAAGDLLRAEVAAGSENGRRAKEFMEKGKLVPNE 204 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ RL ++P E L D + S Q + +L+E Sbjct: 205 IVVMMVRDRL------LQPDSQEKGW-LLDGYPRS----QSQA--------TALKEF--- 242 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACL------------------DYFERKDVM 168 PD I+L++P +I ++RV R + + F+ + Sbjct: 243 GFEPDLFILLEVPEEILVERVVGRRLDPVTGRIYHLKYSPPENEEIAARLTQRFDDTEEK 302 Query: 169 IHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + + R Q + D V+ S + V I + + +LV+++ + Sbjct: 303 VKLRLRTHHQNVEAVLSLYKDITIKVNGGVSKEEVFAQIDSALEKLVKQKKA 354 >gi|227508576|ref|ZP_03938625.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227191908|gb|EEI71975.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 295 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G GAGKTT ++L++ L N+ + + +PG T E + E I Sbjct: 37 GPNGAGKTTLLNLIQGILSSHNHTITVLDSQPGSTIVKEKVATMFQDDLQINNVTVREFI 96 Query: 70 VFAAARLDHVEN 81 AA+ H +N Sbjct: 97 KLFAAQATHPKN 108 >gi|224044542|ref|XP_002194876.1| PREDICTED: putative guanylate kinase protein [Taeniopygia guttata] Length = 198 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 80/225 (35%), Gaps = 45/225 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M + G GAGK+T + L K + + V H TR+P H + Sbjct: 1 MQGPRPVVLSGPSGAGKSTLLKKLFKDYENVFGFSVSHTTRQPRPGEVNGKDYHFV---T 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E +A I A G + + S A Q + +Q LD Sbjct: 58 REEMQKEIDA-----------GEFIEHAEFSGNM-----YGTSKGAVQAVQAQNQICVLD 101 Query: 119 S----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++ I E+ P I + + +I KR+++R + E + V Sbjct: 102 VDIQGVKNIKKTELKP---IYISVQPPSIEILEKRLRDRKTETEESLQKRLTAARVD--- 155 Query: 172 KRRQIFLDIARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQK 214 L++++ +P I++ + + + ++ E ++K Sbjct: 156 ------LELSK-EPGLFDLVIIN--DDLEKAYSELKEVLLEEIKK 191 >gi|254420215|ref|ZP_05033939.1| ABC transporter, ATP-binding protein [Brevundimonas sp. BAL3] gi|196186392|gb|EDX81368.1| ABC transporter, ATP-binding protein [Brevundimonas sp. BAL3] Length = 536 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 48/151 (31%), Gaps = 30/151 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 ++ G GAGKTT + L+ L EP R VLL + Sbjct: 377 VAITGPNGAGKTTLLRLIHGAL-----------EPTTGRVERPCRAVLLDQEATILKPDE 425 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA--YQGERDSSQHLFLDSLQEIS 124 + A R + E + A RFL + A + S +L + Sbjct: 426 T--LVEAWRRLNPEGSVNDAQAA-----LARFLFRNVAAHREVGALSGGERLRAALACVM 478 Query: 125 VQEVMPDCTII------LDLP----VDIGLK 145 P I+ LDL V++ L+ Sbjct: 479 TGAAPPQLLILDEPTNHLDLDSVAAVEVALR 509 >gi|90961309|ref|YP_535225.1| ATPases of the AAA+ class [Lactobacillus salivarius UCC118] gi|90820503|gb|ABD99142.1| ATPases of the AAA+ class [Lactobacillus salivarius UCC118] Length = 535 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62 FEG G GKTT ++ R V T+ E G + LS ++E Sbjct: 315 FEGPPGTGKTTVARIVARLFYALGILENTTVIETKRNELEGKWVGD------LSGKINEK 368 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 A V + N P +GK ++ Sbjct: 369 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 399 >gi|46108272|ref|XP_381194.1| hypothetical protein FG01018.1 [Gibberella zeae PH-1] Length = 232 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 59/211 (27%), Gaps = 49/211 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKTT L + L E + E Sbjct: 59 GPAGCGKTTVAEYLAKSL---GMPYV---EGDAFHPTANIEKM---ANGIPLTDEDRWDW 109 Query: 71 FAAARLDHVENVIRPALMEG--KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 A R + + L G ++L S+ RD + + I + Sbjct: 110 LTALREESINR-----LNAGSCGVVL----TCSALKR-KYRDVIRVAGYYD-RRIQIHF- 157 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFERKDVMIHEKRRQIFLDIARN 183 + LD P ++ L RV R + A + D ER +A Sbjct: 158 -----VFLDAPEELLLARVTQRQNHYMGANMVHSQFDILERP--------------LADE 198 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +D + + V L+ V E + K Sbjct: 199 KD--VITIDVSRPIEVVEQEALSNVLETMAK 227 >gi|225626608|ref|ZP_03784647.1| fructose transport system kinase [Brucella ceti str. Cudo] gi|225618265|gb|EEH15308.1| fructose transport system kinase [Brucella ceti str. Cudo] Length = 250 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 59 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 118 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 119 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 171 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 172 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 208 >gi|53725668|ref|YP_102419.1| adenylylsulfate kinase [Burkholderia mallei ATCC 23344] gi|76809462|ref|YP_334183.1| adenylylsulfate kinase [Burkholderia pseudomallei 1710b] gi|52429091|gb|AAU49684.1| adenylylsulfate kinase [Burkholderia mallei ATCC 23344] gi|76578915|gb|ABA48390.1| adenylylsulfate kinase [Burkholderia pseudomallei 1710b] Length = 204 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L A+ ++L G A+ Sbjct: 18 GLPGAGKTTTANALAERLLEDG-----------------AKAIVLDGDALRSGLCADLGF 60 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 61 SDADRMENIRRFAHVAKLFQREGYVVI 87 >gi|15645243|ref|NP_207413.1| adenylate kinase [Helicobacter pylori 26695] gi|2497478|sp|P56104|KAD_HELPY RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|2313740|gb|AAD07683.1| adenylate kinase (adk) [Helicobacter pylori 26695] Length = 191 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 76/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM-EGK-ILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ GK I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSGKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D + V H + R +FL Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + +D S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAIDGERSIEEIVGEMQEYILSF 189 >gi|326693305|ref|ZP_08230310.1| deoxyguanosine kinase [Leuconostoc argentinum KCTC 3773] Length = 210 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 52/225 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT SL+ EP G + + Sbjct: 10 GVGKTTLTSLIAEHF---GTKAFY--EPVGDNPVLPL---------YYSDPKQYGFLLQI 55 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119 L+ ++I+ AL + +L DR + D+ + + +D + Sbjct: 56 YFLNRRFDMIKQALADDNNVL-DRSIYEDALFTAENHKDGNITDAEMEVYTQLLDNMMAE 114 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 LQ++ + PD + + + L R++ R E F+ D + RQ + Sbjct: 115 LQKLPKKA--PDLLVYAETDFETILYRIKKRGRDYEQ-----FDENDEL-----RQYYFR 162 Query: 180 IARNQPDRCHIVDSAH---------SFQSVATN--ILNIVWELVQ 213 I D D++ + A IL+ + E ++ Sbjct: 163 IWSAYRDWFEAYDASPKIKIDLQTYDLEETANQQIILDQIDEALK 207 >gi|325475705|gb|EGC78881.1| bacteriocin ABC transporter [Treponema denticola F0402] Length = 721 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 59/227 (25%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G+ I+F G G+GKTT + LL +F ++ ++ + E+ R ++ Sbjct: 505 IKPGMKIAFVGASGSGKTTLVKLLMKFYNFQSGEILIDGLNIKDLETESYRKLIGYVPQ- 563 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+ + +++ G FL + Y + S F++ L Sbjct: 564 ------EVLLFSGSIRENI------LWGNG-------FLPENALYYAAKVSRSDAFINKL 604 Query: 121 QEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD TI + R + E++R Sbjct: 605 ---------PDRYETI------------IGERGATLSGG-------------ERQRIALA 630 Query: 179 DIARNQPDRCHIVD-SAHSFQSVAT-NILNIVWELVQKRVSPLSSKK 223 I +P + I+D + S ++ I+N + E+++ + + + + + Sbjct: 631 RILLREP-KILILDEATASLDAITEKAIMNTIEEIIENKTTIIVAHR 676 >gi|77461731|ref|YP_351238.1| adenylylsulfate kinase [Pseudomonas fluorescens Pf0-1] gi|77385734|gb|ABA77247.1| putative adenylylsulfate kinase [Pseudomonas fluorescens Pf0-1] Length = 182 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 9/89 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ GAGK+T L L+ + V + + R V + Sbjct: 10 IWITGLSGAGKSTLAGDLVDRLRSRGESVVML-------DGDELREVFGATAASSQNHGR 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLC 95 E + A + H+ +I A +++ Sbjct: 63 EGRLALAMQYAHLCRMI--AAQGHTVVIA 89 >gi|325286834|ref|YP_004262624.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Cellulophaga lytica DSM 7489] gi|324322288|gb|ADY29753.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Cellulophaga lytica DSM 7489] Length = 381 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 66/203 (32%), Gaps = 25/203 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F++ EG GAGKTT + + K P E F E Sbjct: 181 FLAIEGNIGAGKTTLANKISEDYNAKLIVERFADNPFLPKFYE-------DQTRYAFPLE 233 Query: 66 AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123 F A R ++ + L ++ D + S + L L ++ Sbjct: 234 MS---FLADRYQQYSDDTSQLDLFRSFMV-SDYDIFKSLIFAKVTLHQDEFKLYRKLFDL 289 Query: 124 SVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIA 181 ++V PD + L + + ++ R E DY E K + +LD Sbjct: 290 MYKDVKKPDVFVYLYQNTERLIANIKKRGREYEQDIQTDYLE--------KINKGYLDFI 341 Query: 182 RNQP-DRCHIVDSAHSFQSVATN 203 ++ P I+D + VA + Sbjct: 342 KSYPQQNTFIIDVS-DLDFVAND 363 >gi|313665416|ref|YP_004047287.1| hypothetical protein MSB_A0545 [Mycoplasma leachii PG50] gi|312950042|gb|ADR24638.1| conserved domain protein [Mycoplasma leachii PG50] Length = 112 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 11/100 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT + LK+ L +K V+ T P A D Sbjct: 3 IAIFGTTGAGKTTLLENLKKLLDKKYVFVNETS--LDCPYFNKAYD---DSNSDVQDYNY 57 Query: 67 EA-IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + + R ++ I+ + ++ DR + S + Sbjct: 58 KLDLWMLTDR---MKTFIK--YKNHQNVIYDRSILDSMVF 92 >gi|299535184|ref|ZP_07048508.1| hypothetical protein BFZC1_04158 [Lysinibacillus fusiformis ZC1] gi|298729305|gb|EFI69856.1| hypothetical protein BFZC1_04158 [Lysinibacillus fusiformis ZC1] Length = 274 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 53/155 (34%), Gaps = 33/155 (21%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL + FEG++ AGK I L + + Y VH P P A R+ L + Sbjct: 43 GLILVFEGMDAAGKGGAIKRLIERVDPRGYVVH----PISAPQAHELRYNYLQRFWRKLP 98 Query: 64 AEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + +F R + + I + + S AY +++ Sbjct: 99 QHGQIAIF--DRSWYGRVLVERIEGFATKDEW---------SRAY---------EEINNF 138 Query: 121 QEISVQEVMPDCTI---ILDLPVDIGLKRVQNRYS 152 ++I D I L + + LKR + R Sbjct: 139 EKILTAG---DYIIIKFWLHVSDEEQLKRFKEREQ 170 >gi|159040898|ref|YP_001540150.1| hypothetical protein Cmaq_0312 [Caldivirga maquilingensis IC-167] gi|221272209|sp|A8MB70|NTPTH_CALMQ RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase THEP1; AltName: Full=Nucleoside triphosphate phosphohydrolase gi|157919733|gb|ABW01160.1| protein of unknown function DUF265 [Caldivirga maquilingensis IC-167] Length = 173 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 M G+F++ G G GKTT I + L+ + + Sbjct: 1 MVQGVFVT--GPPGVGKTTLIVKVTSRLKERGIRIV 34 >gi|158320252|ref|YP_001512759.1| ATPase [Alkaliphilus oremlandii OhILAs] gi|158140451|gb|ABW18763.1| ATPase [Alkaliphilus oremlandii OhILAs] Length = 364 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 18/37 (48%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 I EG +G GK+T + L K YDV V EP Sbjct: 219 KIIYIEGEDGTGKSTLLERLMNTAVTKGYDVEVYHEP 255 >gi|331700720|ref|YP_004397679.1| phosphonate-transporting ATPase [Lactobacillus buchneri NRRL B-30929] gi|329128063|gb|AEB72616.1| Phosphonate-transporting ATPase., Heme-transporting ATPase [Lactobacillus buchneri NRRL B-30929] Length = 553 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34 +N G FI G G+GKTT I+ K+ L + Sbjct: 29 INRGEFIVIAGATGSGKTTLINHFKKELLPNGHR 62 >gi|291530254|emb|CBK95839.1| Uridine kinase [Eubacterium siraeum 70/3] Length = 176 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 128 VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P DC I +D P+DI + R R A D + + R ++ + +N Sbjct: 92 IKPYLDCCIFIDTPLDIAMARRILR--DMREATSDEICNEMDTYLKYARTAYIQMVKNHL 149 Query: 186 DRC-HIVDSAHSFQSVATNILNIVWEL 211 C +++D A +S+ + I+ + Sbjct: 150 ATCDYVIDGAKELESIINETVEIISRI 176 >gi|196034111|ref|ZP_03101521.1| conserved hypothetical protein [Bacillus cereus W] gi|195993185|gb|EDX57143.1| conserved hypothetical protein [Bacillus cereus W] Length = 141 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 16/92 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT L + L+ V P P E + + L E Sbjct: 5 ISLQGPMASGKTT----LAKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG---- 53 Query: 67 EAIVFAAARLDHVENVIRPA-LMEGKILLCDR 97 F A + +E I+ +G +++ DR Sbjct: 54 ----FIANQKMFIEAKIKEFQNAKGSVVIFDR 81 >gi|53711420|ref|YP_097412.1| hypothetical protein BF0129 [Bacteroides fragilis YCH46] gi|154490881|ref|ZP_02030822.1| hypothetical protein PARMER_00798 [Parabacteroides merdae ATCC 43184] gi|167762735|ref|ZP_02434862.1| hypothetical protein BACSTE_01093 [Bacteroides stercoris ATCC 43183] gi|189461194|ref|ZP_03009979.1| hypothetical protein BACCOP_01841 [Bacteroides coprocola DSM 17136] gi|189464465|ref|ZP_03013250.1| hypothetical protein BACINT_00807 [Bacteroides intestinalis DSM 17393] gi|198277343|ref|ZP_03209874.1| hypothetical protein BACPLE_03555 [Bacteroides plebeius DSM 17135] gi|212692144|ref|ZP_03300272.1| hypothetical protein BACDOR_01639 [Bacteroides dorei DSM 17855] gi|218131454|ref|ZP_03460258.1| hypothetical protein BACEGG_03072 [Bacteroides eggerthii DSM 20697] gi|218261263|ref|ZP_03476135.1| hypothetical protein PRABACTJOHN_01799 [Parabacteroides johnsonii DSM 18315] gi|237709571|ref|ZP_04540052.1| TraA [Bacteroides sp. 9_1_42FAA] gi|237717853|ref|ZP_04548334.1| TraA [Bacteroides sp. 2_2_4] gi|255012125|ref|ZP_05284251.1| hypothetical protein Bfra3_23497 [Bacteroides fragilis 3_1_12] gi|265766694|ref|ZP_06094523.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|294644213|ref|ZP_06721985.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294807393|ref|ZP_06766199.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298377041|ref|ZP_06986995.1| conjugative transposon protein TraA [Bacteroides sp. 3_1_19] gi|298483562|ref|ZP_07001738.1| conjugative transposon protein TraA [Bacteroides sp. D22] gi|301309277|ref|ZP_07215220.1| putative conjugative transposon protein TraA [Bacteroides sp. 20_3] gi|52214285|dbj|BAD46878.1| TraA [Bacteroides fragilis YCH46] gi|154088629|gb|EDN87673.1| hypothetical protein PARMER_00798 [Parabacteroides merdae ATCC 43184] gi|167699075|gb|EDS15654.1| hypothetical protein BACSTE_01093 [Bacteroides stercoris ATCC 43183] gi|189432108|gb|EDV01093.1| hypothetical protein BACCOP_01841 [Bacteroides coprocola DSM 17136] gi|189438255|gb|EDV07240.1| hypothetical protein BACINT_00807 [Bacteroides intestinalis DSM 17393] gi|198269841|gb|EDY94111.1| hypothetical protein BACPLE_03555 [Bacteroides plebeius DSM 17135] gi|212665265|gb|EEB25837.1| hypothetical protein BACDOR_01639 [Bacteroides dorei DSM 17855] gi|217986386|gb|EEC52723.1| hypothetical protein BACEGG_03072 [Bacteroides eggerthii DSM 20697] gi|218224142|gb|EEC96792.1| hypothetical protein PRABACTJOHN_01799 [Parabacteroides johnsonii DSM 18315] gi|229452793|gb|EEO58584.1| TraA [Bacteroides sp. 2_2_4] gi|229456207|gb|EEO61928.1| TraA [Bacteroides sp. 9_1_42FAA] gi|263253071|gb|EEZ24547.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|292640445|gb|EFF58691.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|294445413|gb|EFG14074.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b] gi|298266025|gb|EFI07684.1| conjugative transposon protein TraA [Bacteroides sp. 3_1_19] gi|298270319|gb|EFI11904.1| conjugative transposon protein TraA [Bacteroides sp. D22] gi|300832722|gb|EFK63349.1| putative conjugative transposon protein TraA [Bacteroides sp. 20_3] Length = 349 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 97 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 150 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 151 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 189 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 190 DDAERMIATEDVKPD-VVFFDMP 211 >gi|323188583|gb|EFZ73868.1| hypothetical protein ECRN5871_3002 [Escherichia coli RN587/1] Length = 154 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 23/157 (14%), Positives = 44/157 (28%), Gaps = 31/157 (19%) Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQ 126 AR + G I+L DR+ AY G + F+ L + Sbjct: 13 FVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERK 72 Query: 127 EV------MPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD I L++ +++ R R SL + + Sbjct: 73 AFHWMASHKPDLVIKLNVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGA 122 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +D+ + V + + + + R Sbjct: 123 QLVD--------IDANQPLEKVLVDAEKAITDFMTAR 151 >gi|315426764|dbj|BAJ48387.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 271 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 15/83 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA---ARHVLLSCGVDEFGAEAEAIV 70 GAGK+T +L + L+ K + V R P E R L + E Sbjct: 100 GAGKSTVSRMLVKLLREKGHRPVVVRHPMPYGVLEKQVVQRFASLDDLDRYRCSIEE--- 156 Query: 71 FAAARLDHVENVIRPALMEGKIL 93 P L EG I+ Sbjct: 157 ---------REEFEPHLREGTIV 170 >gi|258564536|ref|XP_002583013.1| uridylate kinase [Uncinocarpus reesii 1704] gi|237908520|gb|EEP82921.1| uridylate kinase [Uncinocarpus reesii 1704] Length = 246 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 63/214 (29%), Gaps = 40/214 (18%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK T + L R L + + G+ E RH + + Sbjct: 48 GGPGSGKGTQSANLVRDYGFSHLSA-GDLLRAEQNREGSKYGELIRHYIREGLIVPM-EI 105 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A++ A E + L G + S + G +E V Sbjct: 106 TVALLSNAMADILEERRAQNTLRAG--------VPSRFLIDGFPRKMDQAVF--FEETVV 155 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR----------Q 175 V T+ L P ++ L R+ R D E IH++ R + Sbjct: 156 PSV---ATLFLSCPEEVMLNRLLKRGET-SGRADDNIES----IHKRFRVFIDQSMPVVE 207 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + V S + V + + + Sbjct: 208 HY-----EKEGKVMTVSSVGTIDEVYSGVKKEIE 236 >gi|227878413|ref|ZP_03996353.1| deoxyguanosine kinase [Lactobacillus crispatus JV-V01] gi|256849566|ref|ZP_05554998.1| deoxyguanosine kinase [Lactobacillus crispatus MV-1A-US] gi|262046234|ref|ZP_06019197.1| deoxyguanosine kinase [Lactobacillus crispatus MV-3A-US] gi|293381342|ref|ZP_06627344.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1] gi|227861942|gb|EEJ69521.1| deoxyguanosine kinase [Lactobacillus crispatus JV-V01] gi|256713682|gb|EEU28671.1| deoxyguanosine kinase [Lactobacillus crispatus MV-1A-US] gi|260573564|gb|EEX30121.1| deoxyguanosine kinase [Lactobacillus crispatus MV-3A-US] gi|290922089|gb|EFD99089.1| deoxynucleoside kinase [Lactobacillus crispatus 214-1] Length = 228 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 79/228 (34%), Gaps = 43/228 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121 + A + L+ + I+ AL E +L DR + + +Q D + +D+ Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106 Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 E+ + E+ PD + +++ D +KR+Q R E D +++ Sbjct: 107 ELLHNMMGELERMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD---STLEDYYKR 163 Query: 173 RRQIFLDIARNQPDRCHI-VDSAH--------SFQSVATNILNIVWEL 211 + + N + +D + V I + E+ Sbjct: 164 LLRYYKPWYENYDYSPKMEIDGDKLDFMANPDDKEKVLDQITAKLKEM 211 >gi|225717932|gb|ACO14812.1| Adenylate kinase isoenzyme 1 [Caligus clemensi] Length = 192 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 69/213 (32%), Gaps = 48/213 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEFGA 64 G G+GK TH + L + + T + G+ ++ + Sbjct: 18 GGPGSGKGTHCESI---LAKYGFTHLSTGDLLRIEVMSGSDRGLKLYKIMSNGDKAPNDM 74 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + VE +I A L+ D + + + + Sbjct: 75 VDEIL---------VEAMIAKASESKGFLI-DGY---------------PINIAQAECFI 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180 P+C ++L+ ++ R++ R + F+ D I ++ F D I Sbjct: 110 KDIREPNCLLVLEANNEVLRGRLKARGN---------FDDTDESIKKRI-ATFNDETRPI 159 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 IV++ + V ++ I+ EL+Q Sbjct: 160 LSKFSKITKIVNAERKPEQVWEDVNKIILELIQ 192 >gi|30263602|ref|NP_845979.1| hypothetical protein BA_3716 [Bacillus anthracis str. Ames] gi|47778199|ref|YP_022652.1| hypothetical protein GBAA_3716 [Bacillus anthracis str. 'Ames Ancestor'] gi|30258237|gb|AAP27465.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gi|47551904|gb|AAT35386.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames Ancestor'] Length = 166 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 36/162 (22%) Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74 +GKTT + L+ V P P E + + L E F A Sbjct: 3 SGKTTL----AKKLELHGLSVIY-ENP--YPIVEKRKQLNLDMNSKEG--------FIAN 47 Query: 75 RLDHVENVIRPA-LMEGKILLCDR----------FLDSSYAYQGERDSSQHLFLDSLQEI 123 + +E I+ +G +++ DR F ++ + + ++ L L+E Sbjct: 48 QKMFIEAKIKEFQNAKGSVVIFDRGPEDIEFYTIFYPTTIGKEWDIETELKDELYKLRE- 106 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV-----QNRYSLRESACLD 160 D LD+ R +NR + E +D Sbjct: 107 ----CRSDAIFYLDVSESNLYDRKNNDRTRNRSTFEEQFYVD 144 >gi|67594051|ref|XP_665771.1| ABC transporter protein [Cryptosporidium hominis TU502] gi|54656597|gb|EAL35540.1| ABC transporter protein [Cryptosporidium hominis] Length = 699 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 17/158 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58 + G I G G+GK+T ++ L L+ + Y++ R V+ Sbjct: 51 SPGQLIGIMGPSGSGKSTLLNALSGRLKGREYNIKGSVAINGFTDIDLGYLTRMVVQDDY 110 Query: 59 VDEFGAEAEAI-VFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQ 113 + + E + + A RL H R E I + D R + +Y + Sbjct: 111 LLPYLTIKETMDIVAGLRLPHYSKKDR---EEKIIEILDIMGLRHVQDTYVGGISKKGIS 167 Query: 114 HLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149 + L I+++ + P + LD GL + Sbjct: 168 GGEMKRLS-IALELIQNPP--ILFLD-EPTTGLDAARA 201 >gi|291482384|dbj|BAI83459.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. natto BEST195] Length = 217 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 34/220 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + + E P E H + + Sbjct: 12 ITVAGTVGVGKSTLTKTLAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119 + F A R + G + DR + D+ A +G + S Sbjct: 63 QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTS 117 Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175 L E ++ PD I L+ ++ L R++ R E Y+E +H + Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWE----EMHTRYEN 173 Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F + + + + +++ +S +++ I +++ + Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHD 213 >gi|242082794|ref|XP_002441822.1| hypothetical protein SORBIDRAFT_08g002900 [Sorghum bicolor] gi|241942515|gb|EES15660.1| hypothetical protein SORBIDRAFT_08g002900 [Sorghum bicolor] Length = 927 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 27/91 (29%), Gaps = 11/91 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA---RHVLLSCGVDEFGAEA- 66 G G GKTT + L L V E G + + Sbjct: 32 GPPGCGKTTLLKALAGKLNATGLKVTGEVEYNGVELSSFVPEKTAAYIDQYDLHVPEMTV 91 Query: 67 -EAIVFAA------ARLDHVENVIRPALMEG 90 E I F+A R + ++ VIR G Sbjct: 92 RETIDFSARFQGVGNRAEIMKEVIRKEKEAG 122 >gi|294934198|ref|XP_002781028.1| Guanylate kinase, putative [Perkinsus marinus ATCC 50983] gi|239891199|gb|EER12823.1| Guanylate kinase, putative [Perkinsus marinus ATCC 50983] Length = 219 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 44/188 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G GAGK+T I L + + V H TR G E F + Sbjct: 33 GPSGAGKSTLIKRLLKEFPGHFGFSVSHTTR---GMRTGEV------DGKSYHFTSRPTM 83 Query: 69 IVFAAA--RLDHVENV----------IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A ++H E +R L G+I + D Sbjct: 84 EAAMADGEFIEHAEVHGNLYGTSKASVREVLSHGEICILD---------------IDVQG 128 Query: 117 LDSLQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++SL+ + P + + KR+++R + E+A E + + Sbjct: 129 VESLKASTDLGFYPTYVF---ISPPSMQVLEKRLRDRKTETEAAIEKRLETARKEMTYRD 185 Query: 174 RQIFLDIA 181 F D+ Sbjct: 186 IPGFWDLV 193 >gi|146076472|ref|XP_001462935.1| adenylate kinase [Leishmania infantum JPCM5] gi|134067016|emb|CAM65121.1| putative adenylate kinase [Leishmania infantum JPCM5] gi|322496363|emb|CBZ31434.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 209 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 59/233 (25%), Gaps = 65/233 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI G G+GK T+ + L A E R S + Sbjct: 19 FFIL--GGPGSGKGTNCARLVE-----------DFGYTHFSAGELLREAARSGTGNLA-- 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKIL------------LCDRFLDSSYAYQGERDSS 112 I + G I+ + D Y G Sbjct: 64 -----------------KIGDIIRSGNIVPSEITVELLRQAIADHPNSVGYVIDGFPRKE 106 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + P + D +R+ +R + E++D E Sbjct: 107 DQARM-----FEEGIAKPTGILYYDCSEATMEERLLSRGANSG-------EKRDDDAAET 154 Query: 173 RRQIFLDIARN---------QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 R F + RCH++D+ +V + + E+ +K + Sbjct: 155 IRHRFRVNVQECMPVVEAYKANGRCHVIDANRDRDTVYADTKKVFLEMGEKPL 207 >gi|320587626|gb|EFX00101.1| thymidylate kinase [Grosmannia clavigera kw1407] Length = 415 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 32/107 (29%), Gaps = 35/107 (32%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA--------- 181 D + LDL + KR D + + + + +F ++ Sbjct: 303 DLVLFLDLDEEQAKKR---------GGWGDEL-YEKAEMQRRVKDLFWGLSFGRIDVKGA 352 Query: 182 ----------------RNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 R + + +VD++ S VA I IV + Sbjct: 353 VKAGEDHADFAVGLTFRQEEEDLSVVDASASAHDVADAIWKIVHPRI 399 >gi|108563024|ref|YP_627340.1| adenylate kinase [Helicobacter pylori HPAG1] gi|123373786|sp|Q1CTQ6|KAD_HELPH RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|107836797|gb|ABF84666.1| adenylate kinase [Helicobacter pylori HPAG1] Length = 191 Score = 40.8 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 77/219 (35%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELI----SKNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ +I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKRIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D + V H + R +FL Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D +A +++ S + + + + Sbjct: 151 DPLAEIQNFYKAKHLHKVINGERSIEEIVHEMQEYILSF 189 >gi|316973853|gb|EFV57402.1| conserved hypothetical protein [Trichinella spiralis] Length = 385 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 32/181 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEF 62 I EG G+GK L L + RH LL F Sbjct: 71 RLIVVEGNIGSGKGKFSRELAELLGFHYIPAVNLDDIFVDSYGIDRRHYYHLLPESCRFF 130 Query: 63 GAEAEA------------IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----- 105 A+ + +++++ N + + G+ ++ +R S + + Sbjct: 131 DAKLFYENPKHKNVANFQYMMFYSKVENYLNSLAHLMNTGQGVVTERIAHSDFVFVKAMH 190 Query: 106 -QGERDSSQHLFLDSLQE--ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 QG + + L++ ++ + P I LD PV E LD + Sbjct: 191 EQGFLSDDFYDYYFKLKKHILATIPLFPHLVIYLDCPV----------VEDIEKVDLDTY 240 Query: 163 E 163 E Sbjct: 241 E 241 >gi|225374445|ref|ZP_03751666.1| hypothetical protein ROSEINA2194_00060 [Roseburia inulinivorans DSM 16841] gi|225213683|gb|EEG96037.1| hypothetical protein ROSEINA2194_00060 [Roseburia inulinivorans DSM 16841] Length = 450 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 22/122 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD-----E 61 I EG++GAGKTT + L + K V +T P A + ++ Sbjct: 105 IMMEGLQGAGKTTTAAKLAGKFKLKGKKVLLTACDIYRPGA--IEQLQINGEKQGVEVFS 162 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + + + A A ++H E I++ D R + LQ Sbjct: 163 MGDKIKPVNIAKAAIEHAAK------NEFNIVILD---------TAGRLHIDDDMMAELQ 207 Query: 122 EI 123 EI Sbjct: 208 EI 209 >gi|149633267|ref|XP_001509757.1| PREDICTED: similar to dynein, cytoplasmic, heavy polypeptide 2 [Ornithorhynchus anatinus] Length = 4391 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 30/125 (24%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVD 60 +G+ I G G GK+T +L+ L + V T P P RH LL G Sbjct: 2063 RTGVVIV--GPSGTGKSTLWRMLRAALCKVGKTVKQYTMNPKAMP-----RHQLL--GYI 2113 Query: 61 EFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + ++ +AR V+R ++CD +++ Sbjct: 2114 DMDTREWSDGVLTNSAR-----QVVREPQDVSSWIICD-------------GDIDPEWIE 2155 Query: 119 SLQEI 123 SL + Sbjct: 2156 SLNSV 2160 >gi|124008196|ref|ZP_01692893.1| adenylate kinase [Microscilla marina ATCC 23134] gi|123986295|gb|EAY26117.1| adenylate kinase [Microscilla marina ATCC 23134] Length = 191 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 42/182 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +GK T LK T + R + Sbjct: 4 IIITGPPYSGKGTQCQFLKD-----------TFNLAHVSTGDRIRE-----EKENKTEVG 47 Query: 67 EAIVFAAARLDHVENVIRPALMEGKI--------LLCDRFLDSSYAYQGERDSSQHLFLD 118 + + A R + V + + L I ++ D + + +D Sbjct: 48 KLMSEYADRGELVPDEVMKNLFGNVIDENLNKAGIILDGYPRT------------KPQVD 95 Query: 119 SLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 +L E++ ++ P + +++P + LKR + R +A D + K+ H KR ++F Sbjct: 96 TLLELASEKNTPITHVLNIEVPTEELLKRAKKR-----AATSDREDDKNEQTHLKRIKVF 150 Query: 178 LD 179 + Sbjct: 151 EE 152 >gi|74967379|sp|Q27802|DYHC2_TRIGR RecName: Full=Cytoplasmic dynein 2 heavy chain 1; AltName: Full=Dynein heavy chain isotype 1B gi|17019507|gb|AAA63583.2| dynein heavy chain isotype 1B [Tripneustes gratilla] Length = 4318 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 24/114 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G G+GK+T +L+ L V T P P + H+ E+ + Sbjct: 1989 GPSGSGKSTTWQILRAALNNTGQVVKQYTMNPKAMPRTQLLGHI--DMDTREWSDG--VL 2044 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 ++A V+R ++CD +++SL + Sbjct: 2045 TYSA------RQVVREPQEIHSWIICD-------------GDIDPEWIESLNSV 2079 >gi|78222085|ref|YP_383832.1| cytidylate kinase [Geobacter metallireducens GS-15] gi|78193340|gb|ABB31107.1| cytidylate kinase [Geobacter metallireducens GS-15] Length = 232 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 GL I+ +G GAGK+T L L Sbjct: 3 RRGLIIAIDGPSGAGKSTITKRLADRL 29 >gi|21673086|ref|NP_661151.1| guanylate kinase [Chlorobium tepidum TLS] gi|45477147|sp|Q8KFS5|KGUA_CHLTE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|21646157|gb|AAM71493.1| guanylate kinase [Chlorobium tepidum TLS] Length = 195 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 68/218 (31%), Gaps = 38/218 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 ++ G I F G GK+T L+ L + V TR+ H L Sbjct: 7 LDQGRLIVFSAPSGTGKSTVAKLVMERLGSLEFSVSATTRQMRAGERDGVDYHFLSREEF 66 Query: 60 DEFGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ AE E F + + A+ G LL D LD A +R Sbjct: 67 EKKIAENGFIEHEFFFGNFYGTLLDKTIDAIKAGHNLLFD--LDVKGALNLKRIFGDQAL 124 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L L+ P + +R+Q R S A ER ++ Sbjct: 125 LVFLK-----------------PPSMEELARRLQARDSESAEALKSRLERAEME------ 161 Query: 175 QIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWE 210 L A +V D + +VAT I + + Sbjct: 162 ---LSHAGEFD--FVVVNDDLGRTVDAVATRIAEFLPQ 194 >gi|312082413|ref|XP_003143434.1| dephospho-CoA kinase [Loa loa] gi|307761403|gb|EFO20637.1| dephospho-CoA kinase [Loa loa] Length = 234 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 12/79 (15%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 +++D P DI LKR+Q R ++ E A + M ++RR H+VD Sbjct: 130 VVLVDCPEDIQLKRLQQRDNIDEEAAQKRINAQHPMSDKRRRAT------------HVVD 177 Query: 193 SAHSFQSVATNILNIVWEL 211 ++ + + +LN++ E Sbjct: 178 NSGTMEETRAQVLNLIREF 196 >gi|227487085|ref|ZP_03917401.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51867] gi|227541751|ref|ZP_03971800.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51866] gi|227093159|gb|EEI28471.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51867] gi|227182457|gb|EEI63429.1| adenylate kinase [Corynebacterium glucuronolyticum ATCC 51866] Length = 181 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 68/208 (32%), Gaps = 37/208 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVD 60 I G GAGK T +LLK L T + GT + A+ + + + Sbjct: 3 IVLLGPPGAGKGTQAALLKDKL---GIPHISTGDLFRANIGEGTELGKEAKSYMDAGNLV 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A + RL H +G L D F R Q L Sbjct: 60 PTDVTARMLW---DRLSH------EDAKDGY--LLDGF---------PRTVEQAELLRD- 98 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ D + ++ D+ ++R+ R ++ + + HE+ + + Sbjct: 99 -HLAENGEEIDAVLSFEVSDDVVVERMLARGRDDDNEATIR--NRLKVYHEETQ----PV 151 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 A D+ VD+ S + + + + Sbjct: 152 ADFYGDKLLPVDAEGSVEEINERAMKAL 179 >gi|42525941|ref|NP_971039.1| bacteriocin ABC transporter, ATP-binding/permease, putative [Treponema denticola ATCC 35405] gi|41815991|gb|AAS10920.1| bacteriocin ABC transporter, ATP-binding/permease, putative [Treponema denticola ATCC 35405] Length = 721 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 83/227 (36%), Gaps = 59/227 (25%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G+ I+F G G+GKTT + LL +F ++ ++ + E+ R ++ Sbjct: 505 IKPGMKIAFVGASGSGKTTLVKLLMKFYNFQSGEILIDGLNIKDLETESYRKLIGYVPQ- 563 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++F+ + +++ G FL + Y + S F++ L Sbjct: 564 ------EVLLFSGSIRENI------LWGNG-------FLPENALYYAAKVSRSDAFINKL 604 Query: 121 QEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 PD TI + R + E++R Sbjct: 605 ---------PDRYETI------------IGERGATLSGG-------------ERQRIALA 630 Query: 179 DIARNQPDRCHIVD-SAHSFQSVAT-NILNIVWELVQKRVSPLSSKK 223 I +P + I+D + S ++ I+N + E+++ + + + + + Sbjct: 631 RILLREP-KILILDEATASLDAITEKAIMNTIEEIIENKTTIIVAHR 676 >gi|41408697|ref|NP_961533.1| hypothetical protein MAP2599c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465717|ref|YP_880570.1| adenylylsulfate kinase [Mycobacterium avium 104] gi|254774201|ref|ZP_05215717.1| adenylylsulfate kinase [Mycobacterium avium subsp. avium ATCC 25291] gi|41397055|gb|AAS04916.1| hypothetical protein MAP_2599c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118167004|gb|ABK67901.1| adenylylsulfate kinase [Mycobacterium avium 104] Length = 230 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 17/148 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T +++++ L + ++ A +L E Sbjct: 23 HKGCVIWFTGLSGSGKSTVANVVEQKLYERGIRSYLLDGDNVRYGLNAGPDLLEERHGPE 82 Query: 62 FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 F A R +++ + + G I L A+ + Sbjct: 83 FAQRFGLGFSAQDREENIRRIGAVAKLFCEAGIIALT--------AFISPYVRDRDAIRA 134 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 +L + QE I +D P++I KR Sbjct: 135 TLDDGDFQE------IFIDTPIEICEKR 156 >gi|315426755|dbj|BAJ48379.1| conserved hypothetical protein [Candidatus Caldiarchaeum subterraneum] Length = 403 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 15/83 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA---ARHVLLSCGVDEFGAEAEAIV 70 GAGK+T +L + L+ K + V R P E R L + E Sbjct: 100 GAGKSTVSRMLVKLLREKGHRPVVVRHPMPYGVLEKQVVQRFASLDDLDRYRCSIEE--- 156 Query: 71 FAAARLDHVENVIRPALMEGKIL 93 P L EG I+ Sbjct: 157 ---------REEFEPHLREGTIV 170 >gi|119364603|sp|Q8XJK8|KGUA_CLOPE RecName: Full=Guanylate kinase; AltName: Full=GMP kinase Length = 216 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 56/217 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L + TR P H L Sbjct: 9 NRGVLIVISGPSGAGKGTICKALLEKHDDIFISISATTRNPRVGEVDGVNYHFLTKEEFK 68 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + AE + + +H E + + L EGK ++ Sbjct: 69 QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 106 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E + I LP + +R+ R S + + F+ Sbjct: 107 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 157 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200 + +I +V D+ +++ Sbjct: 158 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 187 >gi|18310730|ref|NP_562664.1| guanylate kinase [Clostridium perfringens str. 13] gi|18145411|dbj|BAB81454.1| guanylate kinase [Clostridium perfringens str. 13] Length = 219 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 60/217 (27%), Gaps = 56/217 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L + TR P H L Sbjct: 12 NRGVLIVISGPSGAGKGTICKALLEKHDDIFISISATTRNPRVGEVDGVNYHFLTKEEFK 71 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + AE + + +H E + + L EGK ++ Sbjct: 72 QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 109 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E + I LP + +R+ R S + + F+ Sbjct: 110 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 160 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200 + +I +V D+ +++ Sbjct: 161 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 190 >gi|313159246|gb|EFR58615.1| adenylate kinase [Alistipes sp. HGB5] Length = 190 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 32/214 (14%), Positives = 65/214 (30%), Gaps = 36/214 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSCGVDEFG 63 I G G GK T LK + T E E R + + Sbjct: 4 IVLFGAPGCGKGTQAQRLKAHY---GIEHVSTGEVIRDEIRRGTELGRSMESYIKAGKLA 60 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + I A V +G + D F ++ Q D + + Sbjct: 61 PDQIVIGMIAN------YVAEHKHAKGC--IFDGFPRTTV---------QAEEFDKI--L 101 Query: 124 SVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEK----RRQIF 177 + + D I + +P + ++R+ + + S R + R + ++ + + Sbjct: 102 AGHGLQVDIMIDIHVPEEELIQRILLRGKDSGRADDASEEVIRGRLDVYRQQTAVVSDYY 161 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A + V+ + V I +++ +L Sbjct: 162 ---AAQ--GKYASVNGTGTMDDVFARITDVIAQL 190 >gi|312198201|ref|YP_004018262.1| sulfate adenylyltransferase large subunit [Frankia sp. EuI1c] gi|311229537|gb|ADP82392.1| sulfate adenylyltransferase, large subunit [Frankia sp. EuI1c] Length = 642 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 69/210 (32%), Gaps = 47/210 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ GAGK+T +L+++ L + + + LL G Sbjct: 466 IWFTGLSGAGKSTIANLVEKKLHDEGFHTY-----------------LLDGDNVRHGLNK 508 Query: 67 EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A R++++ V + G I+L S + LD+ + I Sbjct: 509 DLGFTEADRVENIRRIAEVAKLMADAGLIVLT-----SFISPFRAERQLARDLLDNGEFI 563 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V +D P+ + R + + ++ + A + Sbjct: 564 EVH---------VDTPLHVAEARDRKGLYAKARRG-------ELANFTGIDSPYE--APH 605 Query: 184 QPDRCHIVDSAHSF--QSVATNILNIVWEL 211 P+ +D++ + + A ++ + + Sbjct: 606 NPE--IHLDASGTIPAEQGAEQVVTYLRDA 633 >gi|238917058|ref|YP_002930575.1| guanylate kinase [Eubacterium eligens ATCC 27750] gi|238872418|gb|ACR72128.1| guanylate kinase [Eubacterium eligens ATCC 27750] Length = 209 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 31/179 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ GL + G GAGK T + L + + TR+P R Sbjct: 1 MSKGLLLVISGFSGAGKGTVMKRLLELHDEYSLSISATTRKP---------REGEADGRE 51 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLF 116 F E A +I A G + + AY Q ++ ++ L Sbjct: 52 YFFKTVEEFEKMIAEDA-----LIEHAQYVGN------YYGTPKAYVEEQLDKGNNVILE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIG--LKRVQNRYSLRESACLDYF-----ERKDVM 168 ++ ++++ + PD ++ P KR++ R + E+ E + V Sbjct: 101 IEIQGAMNIKRMFPDAVLMFITPPSAAELEKRLRGRGTEDEATIKARLSRAAEEAEGVE 159 >gi|299143967|ref|ZP_07037047.1| guanylate kinase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518452|gb|EFI42191.1| guanylate kinase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 205 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 65/215 (30%), Gaps = 39/215 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M++G + G G+GK T L + ++ TR P Sbjct: 1 MSAGFLLVLSGPSGSGKGTVSQALMSRNNKISFSTSVTTRTPRPNEVNGENYFFTTIEEF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ E + +A ++ + + + +G+I+L + +D A Q + + Sbjct: 61 EDMVKNDELLEYAFVHTNYYGTPKKFVFSEIEKGEIVLLE--IDVQGALQVKEKYKEA-- 116 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 I LP D R+ R + E F E Sbjct: 117 ----------------VFIFLLPPTMDELKSRLIKRDTETEEEINTRF---KNAFRE--- 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 LD D + ++ + +I NI+ Sbjct: 155 ---LDFVGEY-DYFVV---NNTVEQAVIDIENIIE 182 >gi|294786432|ref|ZP_06751686.1| adenylate kinase (ATP-AMP transphosphorylase) [Parascardovia denticolens F0305] gi|315225994|ref|ZP_07867782.1| adenylate kinase [Parascardovia denticolens DSM 10105] gi|294485265|gb|EFG32899.1| adenylate kinase (ATP-AMP transphosphorylase) [Parascardovia denticolens F0305] gi|315120126|gb|EFT83258.1| adenylate kinase [Parascardovia denticolens DSM 10105] Length = 189 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 80/206 (38%), Gaps = 29/206 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G +G GK T +LL + T + R+ L + E G +A+A + Sbjct: 7 GPQGVGKGTQAALLAQHY---GIPAIST--------GDIFRYNLKNQ--TELGKQAQAFM 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + + V + + A+++ ++ + D+ + + +++L I P Sbjct: 54 ---DKGELVPDQLTNAIVKDRLAM----DDAKQGWILDGYPRNAAQVEALDSILTDLCTP 106 Query: 131 -DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIFLDIARNQPDR 187 D + L D+ ++R+ R + E D E K + ++ K + L I +R Sbjct: 107 LDRVVALHADHDVLMERMTKRAEI-EGRADDTPEVIAKRLDVYAKETEPLLAI---YKER 162 Query: 188 CHI--VDSAHSFQSVATNILNIVWEL 211 + VD ++ I++ + ++ Sbjct: 163 GLLLSVDGVGRIDEISRTIISQLDQV 188 >gi|270158016|ref|ZP_06186673.1| cell division protein FtsY [Legionella longbeachae D-4968] gi|289163717|ref|YP_003453855.1| Cell division protein FtsY homolog [Legionella longbeachae NSW150] gi|269990041|gb|EEZ96295.1| cell division protein FtsY [Legionella longbeachae D-4968] gi|288856890|emb|CBJ10701.1| Cell division protein FtsY homolog [Legionella longbeachae NSW150] Length = 350 Score = 40.8 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 22/127 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + Q++ V + G T A A +L+ ++ A Sbjct: 153 GVNGAGKTTTIGKLAKQFQQQGKKVMLAA--GDTFRAAAVEQLLVWGERNDIPVIA---- 206 Query: 71 FAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--S 124 H +VI AL K R +D A R +Q ++ L+++ Sbjct: 207 ------QHTGADSASVIFDALQAAKA----RKMDVLIADTAGRLHTQSNLMEELKKVKRV 256 Query: 125 VQEVMPD 131 +Q++ PD Sbjct: 257 LQKLSPD 263 >gi|330995569|ref|ZP_08319471.1| hypothetical protein HMPREF9442_00532 [Paraprevotella xylaniphila YIT 11841] gi|329575297|gb|EGG56844.1| hypothetical protein HMPREF9442_00532 [Paraprevotella xylaniphila YIT 11841] Length = 343 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 91 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 144 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 145 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 183 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 184 DDAERMIATEDVKPD-VVFFDMP 205 >gi|295135481|ref|YP_003586157.1| deoxyadenosine kinase [Zunongwangia profunda SM-A87] gi|294983496|gb|ADF53961.1| deoxyadenosine kinase [Zunongwangia profunda SM-A87] Length = 243 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 34/190 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT LL + H EP E ++ + + + Sbjct: 49 GAGKTTLTRLLAK---------HYKWEPHYEDVLENPYLEDFYNKMERWSFNLQIYFLNS 99 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSS--------YAYQGERDSSQHLFLDSLQEI 123 I GK ++ DR + D+ RD + L L E Sbjct: 100 RFRQ-----ILQIRESGKKIIQDRTIYEDAYIFAPNLHAMGLMTNRDFENYRSLFELMES 154 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V+ PD I L + + ++Q R E++ + + + + + Sbjct: 155 VVKG--PDLLIYLRSSIPNLVAQIQKRGRDYENSI-------SIDYLSRLNERYEAWVHD 205 Query: 184 -QPDRCHIVD 192 IVD Sbjct: 206 YDKGNLLIVD 215 >gi|170764265|ref|ZP_02639850.2| guanylate kinase [Clostridium perfringens CPE str. F4969] gi|170714271|gb|EDT26453.1| guanylate kinase [Clostridium perfringens CPE str. F4969] Length = 215 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 60/217 (27%), Gaps = 56/217 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ I G GAGK T L V TR P H L Sbjct: 8 NRGVLIVISGPSGAGKGTICKALLEKHDDIFISVSATTRSPRVGEVDGVNYHFLTKEEFK 67 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + AE + + +H E + + L EGK ++ Sbjct: 68 QRIAEDDFL-------EHAEVYGNYYGTPKSSVEKMLDEGKNVIL--------------- 105 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 ++E + I LP + +R+ R S + + F+ Sbjct: 106 EIDIQGALKVKEKATDG-----VFIFILPPSMEELKQRIIKRGSETPESLMTRFKS---- 156 Query: 169 IHEKRRQIFLDIARNQPDRCHIV-----DSAHSFQSV 200 + +I +V D+ +++ Sbjct: 157 -------AYKEINYVSKYNYAVVNDNVEDAVKKIEAI 186 >gi|156085753|ref|XP_001610286.1| UMP-CMP kinase [Babesia bovis T2Bo] gi|154797538|gb|EDO06718.1| UMP-CMP kinase, putative [Babesia bovis] Length = 204 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 75/220 (34%), Gaps = 44/220 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAE---AARHVLLSCGVD 60 I+ G G+GK+T + R K+ RE P ++ R + + V Sbjct: 7 KIITVAGPPGSGKSTMSERMVRAFGFKHISAGECLREEMANPNSKNQQLIRSYIDAGKVI 66 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E ++ + +I++ D F D+ + L Sbjct: 67 PVEITIELLL----------KKMESYGWGREIVIIDGFP-------RNADNVKGWALRMA 109 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF--- 177 + + + D P+++ +R+ R + E A D I + + + Sbjct: 110 HNTELVHM-----LSFDCPMEVCRERIIARIN--ECARTD---NATAAIENRMKVYYDDT 159 Query: 178 ------LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 L +A +C ++++A + ++V I+ ++ L Sbjct: 160 MPIIHSLIMA----GKCTVLNAAGTKEAVWDEIVKVLANL 195 >gi|18312804|ref|NP_559471.1| adenylate kinase [Pyrobaculum aerophilum str. IM2] gi|23821789|sp|Q8ZWP7|KADA_PYRAE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|18160289|gb|AAL63653.1| adenylate kinase [Pyrobaculum aerophilum str. IM2] Length = 197 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 84/221 (38%), Gaps = 40/221 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I + G+GKTT ++ +K+ L DV + G E A+ DE + Sbjct: 3 IVIVALPGSGKTTILNFVKQKLP----DVKIVNY--GDVMLEIAKKRFGIQHRDEMRKKI 56 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + + + E + A + G +++ ++A D + + Sbjct: 57 PVDEYRKVQEEAAEYI---ASLTGDVII------DTHASIKIGGGYYPGLPDRI----IS 103 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE----RKDVMIHEKRRQIFLDIAR 182 ++ PD ++L+ + L+R + D F +++ +H++ + + A Sbjct: 104 KLKPDVILLLEYDPKVILERRKK--------DPDRFRDLESEEEIEMHQQANRYYAFAAA 155 Query: 183 NQPDR-CHIVD-----SAHSFQ--SVATN-ILNIVWELVQK 214 N + H+++ + F+ VA I+N++ QK Sbjct: 156 NAGESTVHVLNFRGKPESRPFEHAEVAAEYIVNLILRTRQK 196 >gi|306836207|ref|ZP_07469191.1| shikimate kinase [Corynebacterium accolens ATCC 49726] gi|304567928|gb|EFM43509.1| shikimate kinase [Corynebacterium accolens ATCC 49726] Length = 179 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 72/209 (34%), Gaps = 49/209 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G GAGK+T L L D ++ G P E + S + E Sbjct: 16 VVLIGPPGAGKSTIGRRLSHALNCDLVDSDYLIEMAEGKPCGE-----VFSEKGEPAFRE 70 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 EA +HV AL +G ++ S G + L+ + Sbjct: 71 LEA--------EHVA----AALQKGGVV-------SL----GGGAVMTASTRELLERHT- 106 Query: 126 QEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + LD+ + G +R +NR L ++++ I E RR +L++A Sbjct: 107 -------VVFLDISAEEGARRTAGDRNRPVLAADNPVEHY----RSIVETRRPFYLEVAD 155 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R D S Q V +IL + L Sbjct: 156 ---FRVRT-D-TRSPQQVVGDILGFLETL 179 >gi|83859868|ref|ZP_00953388.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Oceanicaulis alexandrii HTCC2633] gi|83852227|gb|EAP90081.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Oceanicaulis alexandrii HTCC2633] Length = 632 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 47/141 (33%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L++R L + L G + Sbjct: 464 FTGLSGAGKSTIANLVERKLAEAGRHTYS-----------------LDGDNVRHGLNKDL 506 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++++ V + + G I+ C S + +D + I Sbjct: 507 GFTDVDRVENIRRIGEVAKLFVDAGLIVTC-----SFISPFRSERQMVRELVDEAEFIE- 560 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 I +D P+++ ++R Sbjct: 561 --------IFVDAPLEVCMQR 573 >gi|34556623|ref|NP_906438.1| hypothetical protein WS0175 [Wolinella succinogenes DSM 1740] gi|34482337|emb|CAE09338.1| conserved hypothetical protein [Wolinella succinogenes] Length = 288 Score = 40.4 bits (94), Expect = 0.16, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 64/200 (32%), Gaps = 33/200 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 + I EG +GAGK I L L + V ++P ++E Sbjct: 52 KKIIIILEGRDGAGKGGTIKALTEHLNPRGARVVALQKPSDVEKT----QWYFQRYINEL 107 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E + F R + + + C + YQ + +L++ Sbjct: 108 PVGGEIVFF--DRSWYNRAGVEKVMG-----FCTNEQYKEFIYQ----------VPNLEQ 150 Query: 123 ISVQEVMPDCTI--ILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLD 179 + + LD+ + LKR++ R + L + K + + ++ + F Sbjct: 151 MLLGSGF--LVFKYFLDVGQEEQLKRIERRKTDPLRMWKLSPIDEKSLGLWDEYTEAFQK 208 Query: 180 IARN-----QPDRCHIVDSA 194 + P ++DS Sbjct: 209 MFARTHTPYAP--WVVIDSN 226 >gi|328463759|gb|EGF35326.1| hypothetical protein AAULH_12151 [Lactobacillus helveticus MTCC 5463] Length = 183 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 14/109 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCG 58 M+ G I +GI +GKTT + L + L Y + R E ++L Sbjct: 1 MSRGKIILIDGISNSGKTTLCNNLSKQL---GYKIVPESIRYL-ENRLNEKGDNILYVPK 56 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPAL---MEGKILLCDRFLDSSYA 104 + + I+F D + A G+ ++ D+ S A Sbjct: 57 NIQEELRNQEILF-----DLEFDKWFDANYFADHGQNVVIDKSPYSIVA 100 >gi|290958713|ref|YP_003489895.1| hypothetical protein SCAB_42791 [Streptomyces scabiei 87.22] gi|260648239|emb|CBG71348.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 189 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 44/146 (30%), Gaps = 26/146 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK+T LL L VH+ + L ++ Sbjct: 2 IVLTGPPGAGKSTVAQLLADHLT---PSVHLHSDDFWRSIKRGWIAPYLPEAHEQNQVVL 58 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + +V AA G ++CD F+D + + + Sbjct: 59 QVLVSAAF----------GYAEGGYQVICD-------------GIVGPWFIDFFRVTARE 95 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYS 152 +P +IL L+R +R Sbjct: 96 RALPLSYVILRPDKHTTLERATSRAG 121 >gi|229161457|ref|ZP_04289438.1| uridine kinase [Bacillus cereus R309803] gi|228621994|gb|EEK78839.1| uridine kinase [Bacillus cereus R309803] Length = 186 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 40/220 (18%), Positives = 75/220 (34%), Gaps = 42/220 (19%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 MN I+ + G GKTT L L ++ A+ + + Sbjct: 1 MNKNTKIITIAAVSGGGKTTVTESLTHKLTNS-KALYFDSYYFDNCPADICKWI-----D 54 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D + + + H+ IR + ++ I+ D +AY Sbjct: 55 DGANYDEWVLTPLIHDIQHL---IRDSNIDYIIV------DYPFAY-------------- 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L Q + D TI +D P+DI + R R +D R+ +L+ Sbjct: 92 LNSEMRQFI--DVTIFIDTPLDIAMARRILR--DFNEGTIDEIHNDLKHYMTFARKAYLE 147 Query: 180 IA---RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 ++ D ++D + S + + I + EL +++V Sbjct: 148 AIHTVKSNSD--IVLDGSLSVKEI---IDRTLEELNRRKV 182 >gi|57526531|ref|NP_001002743.1| thymidine kinase 2, mitochondrial [Danio rerio] gi|49901472|gb|AAH76441.1| Thymidine kinase 2, mitochondrial [Danio rerio] Length = 228 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 40/189 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--------GGTPAAEAARHVLLSCG 58 I EG +GKTT + + + +V EP G P + Sbjct: 22 ICLEGNIASGKTTCLEYFSKT---SDIEVLT--EPVSKWRNVQGCNPLGL----MYQDPT 72 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDS 111 + + R HV + P I + +R + S + G+ Sbjct: 73 RWGLTLQTYVQLTMLDR--HVSPMSAP------IRMMERSIYSAKYIFVENLYKSGKMPE 124 Query: 112 SQHLFL-DSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFER---- 164 L + + I +P D + L +R++ R E L+Y E Sbjct: 125 VDFAVLSEWFEWIIKNISLPVDLIVYLQTSPQTCYERLKQRCREEEKVIPLEYLESIHNL 184 Query: 165 -KDVMIHEK 172 +D +IH+K Sbjct: 185 YEDWLIHQK 193 >gi|118389916|ref|XP_001028003.1| hypothetical protein TTHERM_00498150 [Tetrahymena thermophila] gi|89309773|gb|EAS07761.1| hypothetical protein TTHERM_00498150 [Tetrahymena thermophila SB210] Length = 547 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 2/100 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-AEAARHVLLSCGVDEFGAE 65 I G AGKT+ + LL L+ + ++V E A + + + Sbjct: 115 ICITGGPCAGKTSGLVLLSEKLRDEGFNVFTVPEAATMIANGGGMIDMSHYDDTQQINFQ 174 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + D + + + ++LCDR L AY Sbjct: 175 KALMKTQVQLEDSFHGIAKLS-NRKSVILCDRGLMDGSAY 213 >gi|297661751|ref|XP_002809387.1| PREDICTED: guanylate kinase-like isoform 2 [Pongo abelii] Length = 263 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 71/223 (31%), Gaps = 41/223 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M+ + G GAGK+T + L + + V H TR P G Sbjct: 67 MSGPRPVVLSGPSGAGKSTLLKRLFQEHSGIFGFSVSHTTRNPRPGE----------ENG 116 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 D + E + R + I A G + + S A Q + ++ LD Sbjct: 117 KDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRICVLD 167 Query: 119 S----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++ I ++ P I + + P + +R++ R + E + + Sbjct: 168 VDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRRRNTETEESLAKRLAAAQADME- 223 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +P +V S + + E ++K Sbjct: 224 ---------SSKEPGLFDVVIVNDSLDQAYAELKEALSEEIKK 257 >gi|256811468|ref|YP_003128837.1| PilT protein domain protein [Methanocaldococcus fervens AG86] gi|256794668|gb|ACV25337.1| PilT protein domain protein [Methanocaldococcus fervens AG86] Length = 637 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 2/50 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 M G+F+S G G+GK+T ++ L F + + V P ++ Sbjct: 278 MAEGIFVS--GPPGSGKSTFVAALAEFYKSQGKIVKTMESPRDLQVSKEI 325 >gi|302533837|ref|ZP_07286179.1| dephospho-CoA kinase [Streptomyces sp. C] gi|302442732|gb|EFL14548.1| dephospho-CoA kinase [Streptomyces sp. C] Length = 200 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 74/217 (34%), Gaps = 34/217 (15%) Query: 11 GIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 GI GAGK+ LL + R +V PG EA +L+ Sbjct: 9 GI-GAGKSEVSRLLAGYGAVVVDADRIAREVVEPGTPGLAAVVEAFGDSVLTADGRLDRP 67 Query: 65 EAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+VF+ A+L + ++ P + + A E + + + + Sbjct: 68 RLGAVVFSDPAKLQTLNAIVHPL------------VGARSAELEEAAGPDAIVVHDVPLL 115 Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + P D +++D D L R+ R + E + R+ L +A Sbjct: 116 TENGLAPLYDLVVVVDAAPDTQLARLTARRGMTEDEARARMAA------QATREQRLAVA 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 ++D+ +++ + + EL + + Sbjct: 170 T------LVIDNDGPLEALEPQVRKVWAELTARAAAE 200 >gi|302683622|ref|XP_003031492.1| hypothetical protein SCHCODRAFT_68690 [Schizophyllum commune H4-8] gi|300105184|gb|EFI96589.1| hypothetical protein SCHCODRAFT_68690 [Schizophyllum commune H4-8] Length = 1223 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 13/89 (14%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA- 66 + G G+GKTT +++L R ++ N V E G+P + + ++ Sbjct: 39 AILGSSGSGKTTLLNILSRRMRSSNLTVAGLVEFNGSPKLSSISNAYVTQMDLLLPTLTV 98 Query: 67 -EAIVFAAA-----------RLDHVENVI 83 E +++AAA R VE +I Sbjct: 99 RETLLYAAALRLPASTNAEKRKQLVEEII 127 >gi|225868142|ref|YP_002744090.1| dephospho-CoA kinase [Streptococcus equi subsp. zooepidemicus] gi|225701418|emb|CAW98515.1| dephospho-CoA kinase [Streptococcus equi subsp. zooepidemicus] Length = 197 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 80/215 (37%), Gaps = 39/215 (18%) Query: 11 GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60 GI G +GK+T ++L+++ + + VH ++ GG +LL G Sbjct: 6 GITGGIASGKSTAVALIRQAGYQVIDADQVVHELQKKGGKLYQVLLETFGQDILLPSGQL 65 Query: 61 EFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AE + A +IR AL + K L Q E L Sbjct: 66 DRPKLAELLFAHSENMAKSSQQQNAIIREALAKQKEELS----------QTEAIFFMDLP 115 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L L E+ Q+ D +L + + LKR+ R L E A + M ++ Sbjct: 116 L--LVELGYQDWF-DAIWLLYVDEETQLKRLMKRNQLTELAARRRIASQLPMSQKR---A 169 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + D+ ++D+ Q++ T I + +L Sbjct: 170 YADL---------VIDNTGDLQALETQISKALHDL 195 >gi|117619153|ref|YP_854661.1| putative kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117560560|gb|ABK37508.1| putative kinase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 168 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 19/92 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I F G+ G+GK+T L + L + +A R +E G Sbjct: 1 MLIIFSGLPGSGKSTIARALAQRLGAVYLRI--------DTIEQAIRDA--ERTAEEMGP 50 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + AR L G ++ D Sbjct: 51 AGYFVAYGLAR---------ENLKLGSTVITD 73 >gi|312199338|ref|YP_004019399.1| sulfate adenylyltransferase large subunit [Frankia sp. EuI1c] gi|311230674|gb|ADP83529.1| sulfate adenylyltransferase, large subunit [Frankia sp. EuI1c] Length = 644 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 34/146 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ GAGK+T +L+++ L + + + LL G Sbjct: 466 IWFTGLSGAGKSTIANLVEKKLHDEGFHTY-----------------LLDGDNVRHGLNK 508 Query: 67 EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A R++++ V + G I+L S + LD+ + I Sbjct: 509 DLGFTEADRVENIRRIAEVAKLMADAGLIVLT-----SFISPFRAERQLARDLLDNGEFI 563 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN 149 V +D P+ + R + Sbjct: 564 EVH---------VDTPLHVAEARDRK 580 >gi|212696361|ref|ZP_03304489.1| hypothetical protein ANHYDRO_00898 [Anaerococcus hydrogenalis DSM 7454] gi|212676639|gb|EEB36246.1| hypothetical protein ANHYDRO_00898 [Anaerococcus hydrogenalis DSM 7454] Length = 140 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 21/35 (60%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F + G G GKTT ++L+ FL+ + ++++ Sbjct: 50 KGKFYTLLGPSGCGKTTILNLIAGFLEANSGEIYI 84 >gi|126506320|ref|NP_001075436.1| sperm adenylate kinase [Strongylocentrotus purpuratus] gi|90902165|gb|ABE01882.1| sperm adenylate kinase [Strongylocentrotus purpuratus] Length = 920 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 65/218 (29%), Gaps = 48/218 (22%) Query: 11 GIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G G+GK T + + Q V E ++ ++ + G+ + Sbjct: 120 GGPGSGKGTQCAKIAERYQGYIHLSLGTALRRKVAKFLEDDSW---KSVADLIKTGGLVK 176 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E + H I L + ++ G + + Sbjct: 177 DDDTYEIL-------QH---KIEKKLKK---------YPTTL---GFIIEGFPRTMSQAK 214 Query: 122 EISVQEVMPDCTIILDLPVDIGLK-RVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + PD I LD ++ LK R++ R E + K+ + +R + F + Sbjct: 215 LFQDKYGTPDLVISLDCD-EVRLKYRLEKRKDTSERE-----DDKEEDVVARRLEAFREQ 268 Query: 181 -------ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + V++ V ++ N++ L Sbjct: 269 TLPVVTHYNAKDGLLRGVNADRDEDEVFFDVANMIDSL 306 >gi|313903131|ref|ZP_07836525.1| Adenylate kinase [Thermaerobacter subterraneus DSM 13965] gi|313466633|gb|EFR62153.1| Adenylate kinase [Thermaerobacter subterraneus DSM 13965] Length = 216 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 43/232 (18%), Positives = 69/232 (29%), Gaps = 58/232 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE--A 66 F G GAGK T + L + R T + R + A+ Sbjct: 5 FLGPPGAGKGTQAARLAQ---RAGVPQIAT--------GDMFRAAVREGTPLGLEAKRYM 53 Query: 67 EAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 EA ++ E + +P +G L D F R Q L+ + + Sbjct: 54 EAGQLVPDQVTLGLVRERLAQPDCRKGF--LLDGF---------PRTVPQAEGLNEV--L 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD--YFE----------------RK 165 + D + D+P + ++R+ R FE ++ Sbjct: 101 AGLGARLDGVLYFDVPDAVVVERLSGRRVCPACGATYHVRFEPPQVEGRCDRCGAELVQR 160 Query: 166 DVMIHEKRRQIFLDIARNQPD---RC-------HIVDSAHSFQSVATNILNI 207 E RQ L + R Q + R H VD+ +V I I Sbjct: 161 SDDREETVRQR-LAVYRQQTEPLVRYYREAGLLHTVDAGRPIDAVEAEIARI 211 >gi|195611658|gb|ACG27659.1| adenylate kinase [Zea mays] Length = 284 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 74/238 (31%), Gaps = 63/238 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G +GK T L+K Q + + R + + + A+ Sbjct: 72 ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 118 Query: 69 IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + V + I +P E L D + S SQ + L+ Sbjct: 119 ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 165 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164 +L+ + PD I+LD+P ++ ++RV R + Sbjct: 166 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 219 Query: 165 KDVMIHEKRR---QIFLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + EK + + + + + + V + +V I ++ +++K+ Sbjct: 220 RFDDTEEKVKLRLETYYENIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 277 >gi|312196661|ref|YP_004016722.1| sulfate adenylyltransferase large subunit [Frankia sp. EuI1c] gi|311227997|gb|ADP80852.1| sulfate adenylyltransferase, large subunit [Frankia sp. EuI1c] Length = 642 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 34/146 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ GAGK+T +L+++ L + + + LL G Sbjct: 466 IWFTGLSGAGKSTIANLVEKKLHDEGFHTY-----------------LLDGDNVRHGLNK 508 Query: 67 EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A R++++ V + G I+L S + LD+ + I Sbjct: 509 DLGFTEADRVENIRRIAEVAKLMADAGLIVLT-----SFISPFRAERQLARDLLDNGEFI 563 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQN 149 V +D P+ + R + Sbjct: 564 EVH---------VDTPLHVAEARDRK 580 >gi|164687807|ref|ZP_02211835.1| hypothetical protein CLOBAR_01451 [Clostridium bartlettii DSM 16795] gi|164603082|gb|EDQ96547.1| hypothetical protein CLOBAR_01451 [Clostridium bartlettii DSM 16795] Length = 207 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 52/167 (31%), Gaps = 26/167 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL + G GAGK T L + V TR P + + L + Sbjct: 4 KKGLLLVISGPSGAGKGTVCKELLKRNPDFKLSVSATTRAPREGEVDGESYYFLTKEKFN 63 Query: 61 EF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E G E + + + L EGK ++ + QG R Sbjct: 64 EMIGQGGFLEYAQIYSNFYGTPKGPVMKYLEEGKDVILE------IEMQGARQ------- 110 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 V+E+ P+ +I LP + R+ R + + + Sbjct: 111 -------VKEMYPEAVLIFVLPPSLEELRNRLTTRGTETQEQVNERL 150 >gi|16077082|ref|NP_387895.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221307823|ref|ZP_03589670.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221312145|ref|ZP_03593950.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221317078|ref|ZP_03598372.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtilis str. JH642] gi|221321341|ref|ZP_03602635.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtilis str. SMY] gi|586859|sp|P37529|DCK_BACSU RecName: Full=Deoxyadenosine/deoxycytidine kinase; Short=dAK/dCK gi|467404|dbj|BAA05250.1| unknown [Bacillus subtilis] gi|2632281|emb|CAB11790.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis subsp. subtilis str. 168] Length = 217 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 34/220 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + + E P E H + + Sbjct: 12 ITVAGTVGVGKSTLTKTLAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119 + F A R + G + DR + D+ A +G + S Sbjct: 63 QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTS 117 Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175 L E ++ PD I L+ ++ L R++ R E Y+E +H + Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWE----EMHTRYEN 173 Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F + + + + +++ +S +++ I +++ + Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHD 213 >gi|293373500|ref|ZP_06619855.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] gi|292631638|gb|EFF50261.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f] Length = 349 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 97 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 150 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 151 ---HEMGLINSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 189 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 190 DDAERMIATEDVKPD-VVFFDMP 211 >gi|148977003|ref|ZP_01813649.1| Type IV secretory pathway, VirD4 component [Vibrionales bacterium SWAT-3] gi|145963663|gb|EDK28924.1| Type IV secretory pathway, VirD4 component [Vibrionales bacterium SWAT-3] Length = 498 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 5/120 (4%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVLLSCGVDEFGA-E 65 +G GAGK+ I L R+++ + + + + E + V+L+ + A + Sbjct: 2 IDGTTGAGKSVAIRKLLRWIRARGDKAIIYDKGCDFVSKFYEPHKDVILNPFDERCAAWD 61 Query: 66 AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A + + + P EG + R + ++ YQ D +++L I Sbjct: 62 IWSDAKEAPDFESLAAALIPQHGEGDPFWVDSARTIFAATTYQMMIDDKHECTIENLLHI 121 >gi|91792146|ref|YP_561797.1| hemin importer ATP-binding subunit [Shewanella denitrificans OS217] gi|123357090|sp|Q12R52|HMUV_SHEDO RecName: Full=Hemin import ATP-binding protein HmuV gi|91714148|gb|ABE54074.1| ABC transporter related [Shewanella denitrificans OS217] Length = 254 Score = 40.4 bits (94), Expect = 0.17, Method: Composition-based stats. Identities = 43/225 (19%), Positives = 79/225 (35%), Gaps = 48/225 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G GAGK++ + L + L+ ++ ++ ++P G P AE AR + ++ ++ Sbjct: 34 GPNGAGKSSLLKALCQSLKTESGEISFYQQPLGQWPKAELARCL-------AVLPQSSSL 86 Query: 70 VFAAARLDHVENVIRP---ALMEGKILLCD---RFLDSSYAYQGE-----RDSSQHLFLD 118 F + V + P + GK L+ R S A Q + + Sbjct: 87 SFGFTVEEVVALGLYPLTISQQAGKALVASQLARLDLSPLANQAYPSLSGGEKQRVHLAR 146 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF- 177 L +++ P ++LD L Q L + L H Q + Sbjct: 147 VLTQLAQAPRAP--LLLLD-EPTSALDLAQQHKVLTLAREL---------AHS---QGYG 191 Query: 178 -------LDIARNQPDRCHIVDSA-----HSFQSV-ATNILNIVW 209 L+ A D ++++ S Q V + L+ VW Sbjct: 192 VIVVLHDLNQAARYADNIVVINNGEIVKQGSPQQVLTKDTLSQVW 236 >gi|327396888|dbj|BAK14254.1| putative thymidine kinase [Red sea bream iridovirus] Length = 210 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 30/202 (14%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GK++ + L +V + EP T + A A Sbjct: 31 GVGKSSLLRSLAN--THHGINVVL--EPTDTW------EPFFQLYCKDPARWAAAFQMM- 79 Query: 74 ARLDHVENVIRPALMEGKI-LLCDRF---LDSSYAYQGERDSSQHLFLDSLQ-EISVQEV 128 + H I A + + + +R + A+ + D++ ++ Sbjct: 80 --VIHSYRNIYSANKDNPLPTIIERSPQCCRAFVAWLYATGQLDTVSHDTINTHLAAVPW 137 Query: 129 MPDCT-IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 + T + L + R R + S DY K+ + AR PD Sbjct: 138 FSNVTQVYLRCSPTVAAARALARPNELNSCPPDYM-----AFLHKQWE-----ARVTPDT 187 Query: 188 CHIVDSAHSFQSVATNILNIVW 209 I+D+ + +V + ++ Sbjct: 188 I-IIDAEQNMDTVRRQFIELLH 208 >gi|226226300|ref|YP_002760406.1| adenylate kinase [Gemmatimonas aurantiaca T-27] gi|259494004|sp|C1A6S6|KAD_GEMAT RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|226089491|dbj|BAH37936.1| adenylate kinase [Gemmatimonas aurantiaca T-27] Length = 214 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 34/240 (14%), Positives = 69/240 (28%), Gaps = 63/240 (26%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G GAGK T L L DV + R + A Sbjct: 1 MIIVLLGPPGAGKGTQGERLAARL-----DV------PKIATGDVLRAAVKEGTPLGLEA 49 Query: 65 EAEAIVFAAARLDHVEN-VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS---- 119 +A A R D V + VI + E + A + + + + Sbjct: 50 KA-----AMDRGDLVPDAVIMGIMKE-----------ALAAPSAAKGAILDGVVRTTPQA 93 Query: 120 --LQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL----------------- 159 L ++ V P D ++ ++ D ++R+ R + Sbjct: 94 AGLNDMLVALGRPLDAVLLFEVDEDELVRRLSGRTTCEACQRPFFGRQPGETCTEGGVSG 153 Query: 160 ---DYFERKDVMIHEKRRQIFLD-------IARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + I ++ +++ + VD+ + + V +L+ + Sbjct: 154 TLVRRKDDEPEAIRKRM-EVYREQTSPVIHWYEKSGANLVRVDAIGTLEEVEGRVLSALR 212 >gi|301299480|ref|ZP_07205754.1| ATPase, AAA family [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852914|gb|EFK80524.1| ATPase, AAA family [Lactobacillus salivarius ACS-116-V-Col5a] Length = 246 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 32/92 (34%), Gaps = 13/92 (14%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY----DVHVTR--EPGGTPAAEAARHVLLSCGVDEF 62 FEG G GKTT ++ R V T+ E G + LS ++E Sbjct: 59 FEGPPGTGKTTVARIVARLFYALGILENTTVVETKRNELEGKWVGD------LSGKINEK 112 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 A V + N P +GK ++ Sbjct: 113 VDSALGGVLFIDEAHQLYNKEDP-YDKGKQVI 143 >gi|284165526|ref|YP_003403805.1| adenylate kinase [Haloterrigena turkmenica DSM 5511] gi|284015181|gb|ADB61132.1| adenylate kinase [Haloterrigena turkmenica DSM 5511] Length = 215 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 52/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + + + D T +A R + + E Sbjct: 6 ILILGAPGAGKGTQSARITEEF---DVDHITT--------GDALRGN-KDMDISDMDTEY 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + R + V + + A++E + D F+ Y R+ Q L+ + ++ Sbjct: 54 DTPREYMDRGELVPDAVVNAIVEEALSQADGFVLDGY----PRNLEQAEELEGMTDL--- 106 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE------------------RKDVM 168 D ++LD+ + + R+ R E + E ++D Sbjct: 107 ----DLALMLDVSQEELVDRLTGRRVCSECGTNYHVEYDQPEEEGVCDECGGELIQRDDD 162 Query: 169 IHEKRRQIFLDIARNQPDRCH----------IVDSAHSFQSVATNILNIVWEL 211 E R+ L++ R + VD + V ++ + + Sbjct: 163 TEETVRER-LEVYRENTEPVIEHYEEQGDLERVDGERAPDEVWADVKATIEDA 214 >gi|260101902|ref|ZP_05752139.1| deoxyguanosine kinase [Lactobacillus helveticus DSM 20075] gi|260084291|gb|EEW68411.1| deoxyguanosine kinase [Lactobacillus helveticus DSM 20075] gi|328464069|gb|EGF35556.1| deoxyguanosine kinase [Lactobacillus helveticus MTCC 5463] Length = 228 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ S+L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTSILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113 + A + L+ + I+ AL E +L DR + + +Q D + Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106 Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H ++ L+ + + PD + +++ D +KR++ R E D Sbjct: 107 ELLHNMMNELERMPKKN--PDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 154 >gi|157164741|ref|YP_001467182.1| adenylate kinase [Campylobacter concisus 13826] gi|171855065|sp|A7ZEH4|KAD_CAMC1 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|112801355|gb|EAT98699.1| adenylate kinase (ATP-AMP transphosphorylase) [Campylobacter concisus 13826] Length = 189 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 79/222 (35%), Gaps = 43/222 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56 M + I G G+GKTT SL+ + ++ + D+ G+ + + Sbjct: 1 MKNLFLII--GAPGSGKTTDASLIAQHDEKFAHFSTGDLLRAEVASGSELGKLIDGFISK 58 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AIV A I+ + ++ D + S E+ + Sbjct: 59 GNLVPLDVVVNAIVSA----------IKSSNKSN--IIIDGYPRS-----VEQMTELDKV 101 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L EIS++ I +D+ D+ RV R + + R ++ Sbjct: 102 LSEQDEISLKG-----VIEVDVSEDVARARVLGRARGADDNN---------EVFNNRMKV 147 Query: 177 FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +LD + ++ + H+V+ + +I N++ +L+ Sbjct: 148 YLDPIKPIRKFYSEKELLHVVNGERGIDEIVADIKNLLAKLI 189 >gi|45552805|ref|NP_995928.1| brown, isoform B [Drosophila melanogaster] gi|21428876|gb|AAM50157.1| GH12107p [Drosophila melanogaster] gi|45445379|gb|AAS64761.1| brown, isoform B [Drosophila melanogaster] Length = 328 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M +G I+ G GAGKTT ++ + + L+ Sbjct: 56 MKTGDLIAILGGSGAGKTTLLAAISQRLR 84 >gi|15607112|ref|NP_214494.1| shikimate kinase [Aquifex aeolicus VF5] gi|7673950|sp|O67925|AROK_AQUAE RecName: Full=Shikimate kinase; Short=SK gi|2984356|gb|AAC07875.1| shikimate kinase [Aquifex aeolicus VF5] Length = 168 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 64/194 (32%), Gaps = 49/194 (25%) Query: 15 AGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71 +GK+T SLL R L YDV RE P + + + + E Sbjct: 11 SGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQ-------IFEKKGEAYFRKLEF--- 60 Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131 V++ + +++ ++L + + Sbjct: 61 ---------EVLKDLSEKENVVIST-------------GGGLGANEEALNFMKSRGT--- 95 Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 T+ +D+P ++ L+R + +E L + + E+RR+I+ ++ V Sbjct: 96 -TVFIDIPFEVFLERCK---DSKERPLLKRPLDEIKNLFEERRKIY---SKAD----IKV 144 Query: 192 DSAHSFQSVATNIL 205 + V IL Sbjct: 145 KGEKPPEEVVKEIL 158 >gi|319948205|ref|ZP_08022364.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Dietzia cinnamea P4] gi|319438140|gb|EFV93101.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Dietzia cinnamea P4] Length = 636 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T S ++R L + + +L G A+ Sbjct: 472 GLSGSGKSTIASEVERLLIESGHPAY-----------------ILDGDNLRHGLNADLGF 514 Query: 71 FAAARLDHVENVIRPA---LMEGKILLC 95 A R +++ A G +++C Sbjct: 515 SAEDRAENIRRTAEVAALFADAGVVVIC 542 >gi|313633101|gb|EFS00001.1| dephospho-CoA kinase [Listeria seeligeri FSL N1-067] Length = 209 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 30/213 (14%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60 G+ G+ GK+T ++++ L + E G AE + +LL+ G Sbjct: 15 GLTGSVATGKSTVSKMIQKAGIPLVDADIAARKVVERGTVGLAEIVAYFGKEILLADGSL 74 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ I + + + P + + +L +R + + LF L Sbjct: 75 NRAKLADIIFKNEDKRQKLNKITHPRVKD--YMLEERKRYFAMGEKVVFFDIPLLFESHL 132 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + Q V + + + LKR+ R +L++ A LD + + I EK Sbjct: 133 ESLVDQIV----VVW--VTPETELKRLMERNNLKKEAALDRINSQ-MGIDEK-------- 177 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ ++++ S + + + V Sbjct: 178 AKKAD---FVINNNESLEKTEKQVSAFIDRFVN 207 >gi|270011806|gb|EFA08254.1| hypothetical protein TcasGA2_TC005882 [Tribolium castaneum] Length = 394 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 11/91 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G+ +GKTT + LK+F + +VHV E A ++ S E Sbjct: 3 LIVVTGVPCSGKTTRSTELKQFFESHGKEVHVVSEFDQIIKANFEKNAFFSDAAAEKHIR 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + +++ + + + +++ D Sbjct: 63 S-----------LLKSEVLKLITQKNVVILD 82 >gi|251790615|ref|YP_003005336.1| adenylate kinase [Dickeya zeae Ech1591] gi|247539236|gb|ACT07857.1| adenylate kinase [Dickeya zeae Ech1591] Length = 214 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 28/234 (11%), Positives = 64/234 (27%), Gaps = 55/234 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + +++ T + R + + A+ Sbjct: 3 IILLGAPGAGKGTQAQFI---MEKYGIPQIST--------GDMLRAAVKAGSELGKQAKE 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + V +++ + + G + + Sbjct: 52 IMDAGKLVTDELVIALVKERIAQDD------------CRNGFLLDGFPRTIPQADAMKDA 99 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-----------------------------SLRESA 157 + D I D+P ++ ++R+ R ++R+ Sbjct: 100 GITVDHVIEFDVPDELIIERIIGRRVHAASGRVYHVTFNPPKVEGKDDVTGDDLTIRKDD 159 Query: 158 CLDYFERKDVMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D ++ V H++ + A R H +D V++ + I+ Sbjct: 160 QEDTVRKRLVEYHQQTAPLVNYYQQEAAANHTRYHKIDGTRPVNEVSSELARIL 213 >gi|37727511|gb|AAO13019.1| adenylate kinase [Trypanosoma cruzi] Length = 260 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 61/235 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T + V + + R + E G A Sbjct: 52 IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--------D 118 E + H ++ KI++ + + D + +L D Sbjct: 99 ETFI-------HNGEMV-----PNKIVIS-----AVRKRLEQDDVKERGWLLDGFPRSQD 141 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYF 162 + + ++P ++L++P I ++R++NR + + + + Sbjct: 142 QAEALESSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERL 201 Query: 163 ERKDVMIHEKRRQ---IFLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWE 210 ++D E I+ + + ++ S +V +L +V Sbjct: 202 IQRDDDHRETVEARLRIYHEKLHGLKEHYGTLVETINGDQSIHAVTEGVLAVVER 256 >gi|312194571|ref|YP_004014632.1| adenylate kinase [Frankia sp. EuI1c] gi|311225907|gb|ADP78762.1| adenylate kinase [Frankia sp. EuI1c] Length = 217 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 63/235 (26%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREP--GGTPAAEAARHVLLSCGVDEFGA 64 G++G+GK T LL L + +V + R T R + S + + Sbjct: 5 VIMGVQGSGKGTQARLLAADLDLVHINVGDIFRWNVQNHTKIGAQVRRAVDSGHLVDD-- 62 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + VE V+R L + + G +++ L+ Sbjct: 63 ------------ELVERVVRERLTNHDW-------NYGFVVDGFPRNARQAEF-FLESYD 102 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-----------------------Y 161 + I LDL D ++RV R LD Sbjct: 103 IDG-----VIYLDLTDDEVVRRVLARRLCSRCG-LDYNLIASRPKVPDVCDVCGGALVAR 156 Query: 162 FERKDVMIHEKRRQIF-------LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + R+ + L+I + + +VD++ +V I + Sbjct: 157 PDDNPEALAVRLRE-YHGKTRPVLEIFQR-KEYVAVVDASQPVPAVNAEIRERLR 209 >gi|168049134|ref|XP_001777019.1| predicted protein [Physcomitrella patens subsp. patens] gi|162671584|gb|EDQ58133.1| predicted protein [Physcomitrella patens subsp. patens] Length = 222 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 74/228 (32%), Gaps = 48/228 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +GK T L+ + + R + + + A+ Sbjct: 4 IMISGAPASGKGTQCELIVQQ-----------YNLTHISTGDLLRAEVAAGTENGKLAQE 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 R + V N + A++E K+ + + G S ++L+ ++ Sbjct: 53 -----YMQRGELVPNDVVVAMVEKKLA----SATNGWLLDGYPRSLSQA--EALENMN-- 99 Query: 127 EVMPDCTIILD--LPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIH 170 + P I+L+ +P +I + RV R + + ++ Sbjct: 100 -IRPHLFILLEASVPDEILVGRVVGRRLDPVTGKIYHLMYSPPETPEIAARLIQRGDDTE 158 Query: 171 EKRR---QIFLDIARNQPDRCH----IVDSAHSFQSVATNILNIVWEL 211 EK + + + ++ D +VD V +I N++ EL Sbjct: 159 EKVKLRLETYYSNVQSVLDVYKPVTKVVDGNRPKTEVFADIQNLITEL 206 >gi|170580372|ref|XP_001895235.1| signal recognition particle receptor alpha subunit [Brugia malayi] gi|158597920|gb|EDP35937.1| signal recognition particle receptor alpha subunit , putative [Brugia malayi] Length = 669 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 17/139 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-D 60 I F G+ G GK+T+++ + +L + V + T A A + + Sbjct: 454 KRPYIIVFCGVNGVGKSTNLAKITFWLNENGHKVLIAA--ADTFRAGAVEQLRTHTKHLN 511 Query: 61 EFGAEAEAIV---FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLF 116 + + + I A+ G ++L D R Sbjct: 512 ALHPNSVQLYEQGYGKDPAGLAAAAISIAVERGTDVVLVD---------TAGRMQDNEPL 562 Query: 117 LDSLQEISVQEVMPDCTII 135 + SL ++ +Q PD + Sbjct: 563 MRSLAKL-IQVNQPDLVLF 580 >gi|89100393|ref|ZP_01173257.1| hypothetical protein B14911_07518 [Bacillus sp. NRRL B-14911] gi|89084912|gb|EAR64049.1| hypothetical protein B14911_07518 [Bacillus sp. NRRL B-14911] Length = 198 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 79/223 (35%), Gaps = 59/223 (26%) Query: 15 AGKTTHISLLKRF--------LQRK--------NYDVHVTREPGG--TPAAEAARH---- 52 +GK+T S+L L+ + Y+ V+R G P E R Sbjct: 7 SGKSTVSSMLMEKGVTVIDADLEARLAVEKGEEAYNGIVSRFGTGILQPDGEIDRAKLGA 66 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDS 111 ++ + A IV A R +E A+ +G+ +++ D Sbjct: 67 IIFHNEEERLALNA--IVHPAVRKRMLEKK-EQAIQKGEQLVVLD--------------- 108 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 LF L+ ++ D T+++ + L+R+ NR SL E + + + E Sbjct: 109 IPLLFESKLEHLA------DKTLLVYTDGETQLRRLMNRNSLSEKEAEARINSQ-MPLTE 161 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 K R +A ++++ + + + ++ + + Sbjct: 162 KVR-----LADA------VINNNGTIEETKEQLSGLLDLWLPE 193 >gi|300726890|ref|ZP_07060318.1| hypothetical protein PBR_1411 [Prevotella bryantii B14] gi|299775837|gb|EFI72419.1| hypothetical protein PBR_1411 [Prevotella bryantii B14] Length = 366 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 2/100 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G AGKTT + + + V E ++ + G +A Sbjct: 7 IVLTGGPCAGKTTALVKVIEHFSNLGWKVFTIPEVPTIFTQSGMDYLTTNKEFFYEGEKA 66 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 + + L+ + A + I++CDR AY Sbjct: 67 TMEMQLS--LEDKFMKMAEAYGDKSIIICDRGALDISAYM 104 >gi|161508201|ref|YP_001578172.1| deoxyguanosine kinase [Lactobacillus helveticus DPC 4571] gi|160349190|gb|ABX27864.1| Deoxyguanosine kinase [Lactobacillus helveticus DPC 4571] Length = 228 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 35/170 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ S+L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTSILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113 + A + L+ + I+ AL E +L DR + + +Q D + Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106 Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H ++ L+ + + PD + +++ D +KR++ R E D Sbjct: 107 ELLHNMMNELERMPKKN--PDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 154 >gi|171185970|ref|YP_001794889.1| GTP-binding signal recognition particle [Thermoproteus neutrophilus V24Sta] gi|226734219|sp|B1Y9L4|SRP54_THENV RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|170935182|gb|ACB40443.1| GTP-binding signal recognition particle SRP54 G- domain [Thermoproteus neutrophilus V24Sta] Length = 433 Score = 40.4 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53 G+EG+GKTT + L + L ++ Y V + PAA + R + Sbjct: 106 GVEGSGKTTTAAKLAKLLVKRGYKVGLVETDTVRPAAFDQLRQL 149 >gi|328352201|emb|CCA38600.1| Signal recognition particle receptor subunit alpha [Pichia pastoris CBS 7435] Length = 558 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 21/137 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEF 62 IS G+ G GK+T++S L +L Y V +T T + A + + E Sbjct: 351 ISVVGVNGVGKSTNLSKLAFWLLSNKYRVLITA--CDTFRSGAVEQLRVHVNNLKKLTED 408 Query: 63 GAEAEAIVFAAARLDHVENVIRPAL---MEGK--ILLCDRFLDSSYAYQGERDSSQHLFL 117 + E D V + + A+ E K I+L D R + + Sbjct: 409 ESHVELFQGGYGGADLVSKIAKGAIQYAEENKFDIVLLD---------TAGRRHNDAQLM 459 Query: 118 DSLQEISVQEVMPDCTI 134 LQ PD I Sbjct: 460 APLQGFVKAA-KPDKII 475 >gi|313158563|gb|EFR57957.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 361 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 109 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 162 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 163 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 201 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 202 DDAERMIATEDVKPD-VVFFDMP 223 >gi|302349262|ref|YP_003816900.1| Archaeal flagellar like-protein H [Acidilobus saccharovorans 345-15] gi|302329674|gb|ADL19869.1| Archaeal flagellar like-protein H [Acidilobus saccharovorans 345-15] Length = 229 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 18/40 (45%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45 I+ EG G+GKT+ LL + R V GG+ Sbjct: 23 LIAVEGDNGSGKTSIALLLAQTYLRAGLSVVYFTNEGGSY 62 >gi|294851467|ref|ZP_06792140.1| fructose transport system kinase [Brucella sp. NVSL 07-0026] gi|294820056|gb|EFG37055.1| fructose transport system kinase [Brucella sp. NVSL 07-0026] Length = 242 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 51 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 110 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 111 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 163 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 164 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 200 >gi|281602377|gb|ADA75361.1| putative ATP-binding protein yghT [Shigella flexneri 2002017] Length = 131 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 31/141 (21%) Query: 88 MEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQEV------MPDCTIIL 136 G I+L DR+ AY G + F+ L + PD I L Sbjct: 6 RRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKL 65 Query: 137 DLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 ++ +++ R R SL + + + +D+ Sbjct: 66 NVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGAQLVD--------IDAN 107 Query: 195 HSFQSVATNILNIVWELVQKR 215 + V + + + + R Sbjct: 108 QPLEQVLVDAEKAITDFMTAR 128 >gi|254568342|ref|XP_002491281.1| Signal recognition particle (SRP) receptor-alpha subunit [Pichia pastoris GS115] gi|238031078|emb|CAY69001.1| Signal recognition particle (SRP) receptor-alpha subunit [Pichia pastoris GS115] Length = 558 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 47/137 (34%), Gaps = 21/137 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEF 62 IS G+ G GK+T++S L +L Y V +T T + A + + E Sbjct: 351 ISVVGVNGVGKSTNLSKLAFWLLSNKYRVLITA--CDTFRSGAVEQLRVHVNNLKKLTED 408 Query: 63 GAEAEAIVFAAARLDHVENVIRPAL---MEGK--ILLCDRFLDSSYAYQGERDSSQHLFL 117 + E D V + + A+ E K I+L D R + + Sbjct: 409 ESHVELFQGGYGGADLVSKIAKGAIQYAEENKFDIVLLD---------TAGRRHNDAQLM 459 Query: 118 DSLQEISVQEVMPDCTI 134 LQ PD I Sbjct: 460 APLQGFVKAA-KPDKII 475 >gi|227887691|ref|ZP_04005496.1| lipoprotein [Escherichia coli 83972] gi|227835087|gb|EEJ45553.1| lipoprotein [Escherichia coli 83972] gi|307555079|gb|ADN47854.1| conserved hypothetical protein [Escherichia coli ABU 83972] Length = 257 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 62/177 (35%), Gaps = 37/177 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G +G GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDGTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV-------------------FAAARLDHVENVIRPALMEGKILLCDRF--- 98 ++ +++ F+ R+ ++ V R A G +++ DRF Sbjct: 83 AKSSKTQSMKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQA 141 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEV---------MPDCTIILDLPVDIGLKR 146 S + Y G + ++ +E P+ I L + +D + R Sbjct: 142 EISGFYYDGPGIGVERATGKISMFLAQRERRLYQKMAQYRPELIIRLGIDIDTAISR 198 >gi|126460331|ref|YP_001056609.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum calidifontis JCM 11548] gi|171855105|sp|A3MWX6|SRP54_PYRCJ RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|126250052|gb|ABO09143.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum calidifontis JCM 11548] Length = 431 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 19/29 (65%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 G+EG+GKTT + L ++L ++ Y V + Sbjct: 105 GVEGSGKTTTAAKLAKYLAKRGYKVGLVE 133 >gi|269962723|ref|ZP_06177066.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832525|gb|EEZ86641.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 129 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 19/94 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ + G+ G+GKTT L + L+ K+++ + E E Sbjct: 1 MSNAKLLLIRGLPGSGKTTLAKKLSKQLKAKHFEADMYFE---NEIGEY------HFDGT 51 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 + E R L +GK ++ Sbjct: 52 KLADAHEWCF----------QQTRKWLSKGKTVI 75 >gi|15964232|ref|NP_384585.1| putative fructose transport system kinase [Sinorhizobium meliloti 1021] gi|307301378|ref|ZP_07581140.1| putative fructose transport system kinase [Sinorhizobium meliloti BL225C] gi|11066210|gb|AAG28501.1|AF196574_4 FrcK [Sinorhizobium meliloti] gi|15073408|emb|CAC41916.1| Putative fructose transport system kinase [Sinorhizobium meliloti 1021] gi|306903834|gb|EFN34421.1| putative fructose transport system kinase [Sinorhizobium meliloti BL225C] Length = 206 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Query: 2 NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSC 57 NSG FI G GAGK+T L + + V G E + Sbjct: 16 NSGRFIVAIAGPPGAGKSTLSETLAEAITQAGEKAAVLPMDGFHMDNAVLEEKGLLARKG 75 Query: 58 GVDEFGAEAEAIVFAAARLD 77 + F + AA R D Sbjct: 76 APETFDVRSFLATLAAVRAD 95 >gi|302039024|ref|YP_003799346.1| lipid A export ATP-binding/permease protein MsbA [Candidatus Nitrospira defluvii] gi|300607088|emb|CBK43421.1| Lipid A export ATP-binding/permease protein MsbA [Candidatus Nitrospira defluvii] Length = 576 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 22/100 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKR-------FLQRKNYDVHVTR----------EPGGT 44 G I+ G G+GKTT ++LL R L +DV R P T Sbjct: 359 KPGELIAIVGPTGSGKTTIMNLLHRFYDPTAGRLTVDGHDVKDVRLDSLYRQIALVPQDT 418 Query: 45 PA-AEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVI 83 R + D +E + AA++ H I Sbjct: 419 ILFGGPIRDNIRYGREDA----SEEEMIAASKAAHAHEFI 454 >gi|18543259|ref|NP_569965.1| CG3587 [Drosophila melanogaster] gi|2832763|emb|CAA15685.1| EG:39E1.2 [Drosophila melanogaster] gi|7290238|gb|AAF45700.1| CG3587 [Drosophila melanogaster] gi|16768888|gb|AAL28663.1| LD09945p [Drosophila melanogaster] gi|220942828|gb|ACL83957.1| CG3587-PA [synthetic construct] gi|220953024|gb|ACL89055.1| CG3587-PA [synthetic construct] Length = 299 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 19/47 (40%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52 + G+ +GK+T L+ + VH+ E P A ++ Sbjct: 3 LVVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN 49 >gi|120537175|ref|YP_957232.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [Marinobacter aquaeolei VT8] gi|120553166|ref|YP_957517.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [Marinobacter aquaeolei VT8] gi|120323015|gb|ABM17330.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [Marinobacter aquaeolei VT8] gi|120327010|gb|ABM21317.1| phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [Marinobacter aquaeolei VT8] Length = 189 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 78/216 (36%), Gaps = 44/216 (20%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 +G I G G+GK T I L ++ L + + R +A HV L+ +EF Sbjct: 2 AGTLIYLIGPSGSGKDTLIDLARQQLGQDSGVCFAHRYITRPASAGGENHVALT--EEEF 59 Query: 63 GAEAEAIVFAAARLDH-----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A A +FA + H + I L +G ++ G R + Sbjct: 60 LARQRAGLFAMSWASHGCHYGIGIEINQWLAKGLTVVM----------NGSRGYLKTAL- 108 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYS---LRESACLDYFERKDVMIHEKRR 174 + E+ P +++++ ++ +R+ R L+ + D+ Sbjct: 109 -----QNYPELCP---VLIEVSPEVLKERLARRGRETLQDIELRLNRNSQFDLD------ 154 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + C VD+ HS ++ + +L I+ + Sbjct: 155 --------AEKG-CLRVDNTHSPEAASQRLLAIINQ 181 >gi|328865257|gb|EGG13643.1| signal recognition particle receptor alpha subunit [Dictyostelium fasciculatum] Length = 607 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 9/31 (29%), Positives = 19/31 (61%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 I F G+ G GK+T+++ + +L+ + V + Sbjct: 402 IVFSGVNGVGKSTNLAKVCYWLKANGHRVML 432 >gi|237753089|ref|ZP_04583569.1| adenylylsulfate kinase [Helicobacter winghamensis ATCC BAA-430] gi|229375356|gb|EEO25447.1| adenylylsulfate kinase [Helicobacter winghamensis ATCC BAA-430] Length = 329 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 15/94 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+SG+ I G+ G+GKTT S L L+++ V + + R++ + Sbjct: 1 MSSGVVIWICGLSGSGKTTLASALVDKLKQQFSSVVLL-------DGDYLRNI-----YN 48 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 +F E + R + ++ + G I++ Sbjct: 49 DFNYSKENRLNLVYRSQKLCAML---VESGCIVV 79 >gi|225870910|ref|YP_002746857.1| dephospho-CoA kinase [Streptococcus equi subsp. equi 4047] gi|225700314|emb|CAW94600.1| dephospho-CoA kinase [Streptococcus equi subsp. equi 4047] Length = 201 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 81/215 (37%), Gaps = 39/215 (18%) Query: 11 GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60 GI G +GK+T ++L+++ + + VH ++ GG +LL G Sbjct: 10 GITGGIASGKSTAVALIRQAGYQVIDADQVVHELQKKGGKLYQVLLETFGQDILLPSGQL 69 Query: 61 EFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AE + A +IR AL + K L Q E L Sbjct: 70 DRPKLAELLFAHSENMAKSSQQQNAIIREALAKQKEELS----------QTEAIFFMDLP 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L L E+ Q+ D +L + + LKR+ R L E A + M ++ Sbjct: 120 L--LVELGYQDWF-DAIWLLYVDEETQLKRLMKRNQLTELAARQRIASQLPMSQKR---A 173 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + D+ ++D+ FQ++ T I + +L Sbjct: 174 YADL---------VIDNTGDFQALETQISKALHDL 199 >gi|157371785|ref|YP_001479774.1| kinase [Serratia proteamaculans 568] gi|157323549|gb|ABV42646.1| kinase [Serratia proteamaculans 568] Length = 169 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 13/26 (50%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR 30 + I F G+ G+GKTT L L Sbjct: 1 MLIVFSGLPGSGKTTLARALASALPA 26 >gi|2772967|gb|AAC08878.1| regulatory protein PilA [Neisseria meningitidis] gi|2772969|gb|AAC08879.1| regulatory protein PilA [Neisseria meningitidis] gi|2772971|gb|AAC08880.1| regulatory protein PilA [Neisseria meningitidis] gi|2772973|gb|AAC08881.1| regulatory protein PilA [Neisseria meningitidis] gi|2772975|gb|AAC08882.1| regulatory protein PilA [Neisseria meningitidis] gi|2772977|gb|AAC08883.1| regulatory protein PilA [Neisseria meningitidis] gi|2772979|gb|AAC08884.1| regulatory protein PilA [Neisseria meningitidis] gi|2772981|gb|AAC08885.1| regulatory protein PilA [Neisseria meningitidis] gi|2772983|gb|AAC08886.1| regulatory protein PilA [Neisseria meningitidis] gi|2772985|gb|AAC08887.1| regulatory protein PilA [Neisseria meningitidis] gi|2772987|gb|AAC08888.1| regulatory protein PilA [Neisseria meningitidis] gi|2772989|gb|AAC08889.1| regulatory protein PilA [Neisseria meningitidis] gi|2772991|gb|AAC08890.1| regulatory protein PilA [Neisseria meningitidis] gi|2772993|gb|AAC08891.1| regulatory protein PilA [Neisseria meningitidis] gi|2772995|gb|AAC08892.1| regulatory protein PilA [Neisseria meningitidis] gi|2772997|gb|AAC08893.1| regulatory protein PilA [Neisseria meningitidis] gi|2772999|gb|AAC08894.1| regulatory protein PilA [Neisseria meningitidis] gi|2773001|gb|AAC08895.1| regulatory protein PilA [Neisseria meningitidis] gi|2773003|gb|AAC08896.1| regulatory protein PilA [Neisseria meningitidis] gi|2773005|gb|AAC08897.1| regulatory protein PilA [Neisseria meningitidis] gi|2773007|gb|AAC08898.1| regulatory protein PilA [Neisseria meningitidis] gi|2773009|gb|AAC08899.1| regulatory protein PilA [Neisseria meningitidis] gi|2773011|gb|AAC08900.1| regulatory protein PilA [Neisseria meningitidis] gi|2773013|gb|AAC08901.1| regulatory protein PilA [Neisseria meningitidis] gi|2773015|gb|AAC08902.1| regulatory protein PilA [Neisseria meningitidis] gi|2773017|gb|AAC08903.1| regulatory protein PilA [Neisseria meningitidis] gi|2773019|gb|AAC08904.1| regulatory protein PilA [Neisseria meningitidis] gi|2773021|gb|AAC08905.1| regulatory protein PilA [Neisseria meningitidis] gi|2773025|gb|AAC08907.1| regulatory protein PilA [Neisseria meningitidis] gi|2773027|gb|AAC08908.1| regulatory protein PilA [Neisseria meningitidis] gi|2773029|gb|AAC08909.1| regulatory protein PilA [Neisseria meningitidis] gi|2773031|gb|AAC08910.1| regulatory protein PilA [Neisseria meningitidis] gi|2773033|gb|AAC08911.1| regulatory protein PilA [Neisseria meningitidis] gi|2773035|gb|AAC08912.1| regulatory protein PilA [Neisseria meningitidis] gi|2773037|gb|AAC08913.1| regulatory protein PilA [Neisseria meningitidis] Length = 144 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 22 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 76 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 77 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 127 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 128 AMPDAPHEIIVVLD 141 >gi|332045149|gb|EGI81342.1| guanylate kinase [Lacinutrix algicola 5H-3-7-4] Length = 195 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 36/150 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I F G+GKTT + L L++K ++ + +R Sbjct: 1 MKQGKLIVFSAPSGSGKTTIVRHL---LKQKELNLAF-------SISATSRE----KRGT 46 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E AE + A H++ E Y+ + ++ L Sbjct: 47 EVHAEDYYFMSAKEFKQHIKEDNFLEWEE--------------VYRDNFYGTLKTEVERL 92 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 + +I D+ V GL R++ + Sbjct: 93 WALGKN-------VIFDIDVSGGL-RIKRK 114 >gi|313149964|ref|ZP_07812157.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138731|gb|EFR56091.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 308 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 56 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 109 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 110 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 148 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 149 DDAERMIATEDVKPD-VVFFDMP 170 >gi|310641514|ref|YP_003946272.1| signal recognition (srp) component [Paenibacillus polymyxa SC2] gi|309246464|gb|ADO56031.1| Signal recognition (SRP) component [Paenibacillus polymyxa SC2] Length = 458 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 19/128 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67 G++GAGKTT L + LQ++N+ + PAA +L ++ V G + Sbjct: 108 GLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQILGEQINAPVFTLGDQTS 167 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 + A L H ++ ++ D R ++ L++I Sbjct: 168 PVEIAKQGLQHAKD------NGNDYVIID---------TAGRLHVDEELMEELRQIHTN- 211 Query: 128 VMPDCTII 135 V PD ++ Sbjct: 212 VKPDEVLL 219 >gi|295706990|ref|YP_003600065.1| adenylylsulfate kinase [Bacillus megaterium DSM 319] gi|294804649|gb|ADF41715.1| adenylylsulfate kinase [Bacillus megaterium DSM 319] Length = 199 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + + L KN R+ +L FG Sbjct: 32 FTGLSGSGKSTVANAVAKALFDKN-----------------IRNYVLDGDNVRFGLNKNL 74 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 A R +++ V + + G+++L Sbjct: 75 GFSAEDRTENIRRIGEVSKLFVDSGQVVLT 104 >gi|255942655|ref|XP_002562096.1| Pc18g02530 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586829|emb|CAP94477.1| Pc18g02530 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1344 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 14/66 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSC 57 + SG FI+F G G GK+T ISLL+RF EP R + LS Sbjct: 1084 IQSGQFIAFVGPSGCGKSTIISLLERF-----------YEPTHGAILFGGRDIRSIELSS 1132 Query: 58 GVDEFG 63 Sbjct: 1133 YRRALS 1138 >gi|114571000|ref|YP_757680.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Maricaulis maris MCS10] gi|114341462|gb|ABI66742.1| adenylylsulfate kinase [Maricaulis maris MCS10] Length = 631 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 28/138 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L++R L + + + + R + G E Sbjct: 463 FTGLSGAGKSTVANLVERKLSQAGHH-------TYSLDGDNIR----HGLNRDLGFTDE- 510 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 R+++V + GK+ F+DS S ++E+ Sbjct: 511 -----DRVENVRRI----GEVGKL-----FVDSGLIVTCSFISPFRSERQMVRELVDDGE 556 Query: 129 MPDCTIILDLPVDIGLKR 146 + +D P+++ ++R Sbjct: 557 F--IEVFIDAPLEVCIER 572 >gi|103487011|ref|YP_616572.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Sphingopyxis alaskensis RB2256] gi|98977088|gb|ABF53239.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Sphingopyxis alaskensis RB2256] Length = 633 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +L+++ L R N LL G + Sbjct: 470 FTGLSGSGKSTIANLVEKKLHRMNRH-----------------SFLLDGDNVRHGLNKDL 512 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + G I++ A+ + + + L Sbjct: 513 GFTEADRIENIRRVGEVAKLMTDAGLIVIT--------AFISPFRAEREMVRSML--PEG 562 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + + I +D P++ +R Sbjct: 563 EFIE----IFIDTPLEEAERR 579 >gi|307318050|ref|ZP_07597487.1| putative fructose transport system kinase [Sinorhizobium meliloti AK83] gi|306896452|gb|EFN27201.1| putative fructose transport system kinase [Sinorhizobium meliloti AK83] Length = 206 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 4/80 (5%) Query: 2 NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSC 57 NSG FI G GAGK+T L + + V G E + Sbjct: 16 NSGRFIVAIAGPPGAGKSTLSETLAEAITQAGEKAAVLPMDGFHMDNAVLEEKGLLARKG 75 Query: 58 GVDEFGAEAEAIVFAAARLD 77 + F + AA R D Sbjct: 76 APETFDVRSFLATLAAVRAD 95 >gi|323342157|ref|ZP_08082390.1| guanylate kinase [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464582|gb|EFY09775.1| guanylate kinase [Erysipelothrix rhusiopathiae ATCC 19414] Length = 193 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 27/176 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M GL I F G G GK T L + L TR+P + + Sbjct: 4 MRRGLLIIFSGPSGVGKGTVRKLFFDREELNLAFSISMTTRKPRNGEVDGQDYYFVTQER 63 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E + A +H + L E DR RD +++ L+ Sbjct: 64 FNEALQNNELLEHAEFVGNHYGTL----LAE-----VDR----------LRDLGKNVLLE 104 Query: 119 SLQEISVQEV--MPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 + ++Q + +PD +I L +P + +R++ R + + + E+ + Sbjct: 105 IEVQGALQVIDRVPDSLSIFL-VPPSMEELKRRIEGRQTESQDVINERLEKAAKEM 159 >gi|315500465|ref|YP_004089268.1| aminoglycoside phosphotransferase [Asticcacaulis excentricus CB 48] gi|315418477|gb|ADU15117.1| aminoglycoside phosphotransferase [Asticcacaulis excentricus CB 48] Length = 482 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 21/161 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M ++ G+ G+GK+TH + + V + E + + Sbjct: 321 MKPAELLAVGGLSGSGKSTHSRHIAPETGRAPGALVL--------RSDEMRKRLWACPEF 372 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + EA A H+ ++ R AL G+ ++ D +++ Q + + L Sbjct: 373 ETLPKEAYTPEENARVYTHLFDLARTALQSGQAVILD----ATFRNQ--DRAREAKALAQ 426 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 Q ++ + + +D+ D L+RV R + A D Sbjct: 427 GQGVAFRA------LWMDVTADERLRRVLQRRNDVSDATPD 461 >gi|225026568|ref|ZP_03715760.1| hypothetical protein EUBHAL_00818 [Eubacterium hallii DSM 3353] gi|224956117|gb|EEG37326.1| hypothetical protein EUBHAL_00818 [Eubacterium hallii DSM 3353] Length = 609 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L++ L +LL G Sbjct: 445 GLSGSGKSTLANELEKHLAALGKHT-----------------MLLDGDNVRMGLNKNLGF 487 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 A R++++ V + G I++ Sbjct: 488 KEADRIENIRRIAEVAKLMNDAGLIVIT 515 >gi|88604250|ref|YP_504428.1| signal recognition particle-docking protein FtsY [Methanospirillum hungatei JF-1] gi|88189712|gb|ABD42709.1| signal recognition particle-docking protein FtsY [Methanospirillum hungatei JF-1] Length = 353 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 27/138 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------V 59 I F G+ G GKTT I+ + RFLQ+ + V + G T A A + + Sbjct: 159 ILFTGVNGTGKTTSIAKVTRFLQKNGFSVVL--GAGDTFRAGAIEQIDVHGERLGVKVIQ 216 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + G++ A++F + ++L D R ++ ++ Sbjct: 217 HQEGSDPTAVLFDTVEYARAHKI--------DVVLGD---------TAGRFHNRANLMNQ 259 Query: 120 LQEISVQEVMPDCTIILD 137 L +I + + PD + +D Sbjct: 260 LAKI-RRVINPDLIVYVD 276 >gi|21228096|ref|NP_634018.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1] gi|20906535|gb|AAM31690.1| ABC transporter, ATP-binding protein [Methanosarcina mazei Go1] Length = 255 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 70/211 (33%), Gaps = 40/211 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G GAGK+T + +L L+ YD+ + + + + + + + Sbjct: 33 GPNGAGKSTTVMMLTTLLRPSSGTAKVCGYDIVKDSKKVRSKISYVPQDMAVD---RKLT 89 Query: 64 AEAEAIVFAA-----ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +++A R V+ VI L DR D Y G L Sbjct: 90 GRENVMLYAKLYGIQNRNSKVDEVIEMMG------LSDRAGDLVAKYSGGMRRRLELSQA 143 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E + LD +GL V R + E + + + + I +L Sbjct: 144 LVHEPE--------VLFLD-EPTLGLD-VSGRKKIWEHIRM--LKAEGMTIFMTTH--YL 189 Query: 179 DIARNQPDRCHIVD-----SAHSFQSVATNI 204 + A +R I+D + S + + +I Sbjct: 190 EEAEKYCNRVAIIDKGRIAAVGSPEKLVNSI 220 >gi|310816898|ref|YP_003964862.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Ketogulonicigenium vulgare Y25] gi|308755633|gb|ADO43562.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Ketogulonicigenium vulgare Y25] Length = 636 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 40/148 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + F G+ G+GK+T +++++ L LL G Sbjct: 469 KLVWFTGLSGSGKSTIANMVEKKLFALGKH-----------------SFLLDGDNVRHGL 511 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A R++++ V + + G I+L A+ + + + D L Sbjct: 512 NRDLGFSDADRVENIRRVGEVGKLMVESGLIVLT--------AFISPFRNERQMVRDML- 562 Query: 122 EISVQEVMPDCTI---ILDLPVDIGLKR 146 P T +D P+ + R Sbjct: 563 --------PAGTFIEVFIDTPLAVAESR 582 >gi|291454278|ref|ZP_06593668.1| ATP/GTP-binding protein [Streptomyces albus J1074] gi|291357227|gb|EFE84129.1| ATP/GTP-binding protein [Streptomyces albus J1074] Length = 223 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 53/159 (33%), Gaps = 43/159 (27%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + G+ G+GK+T I R + + D TRE Sbjct: 54 QGDLVVVSGLPGSGKSTLIRRTVRAARADSQD---TRE---------------QWEARLP 95 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCD----RFLDSSYAYQGERDSSQHLFL 117 A A+ ARL H +R L G+ +++ D R++ A + R Sbjct: 96 AALPYALYRPLARLAHYA-ALRRLLRAGRSVVVHDCGTQRWVRHWLAREARRRG------ 148 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLR 154 +L + LD+ D L +R + R R Sbjct: 149 RTLHM-----------VFLDVDPDTALDGQRARGRGVSR 176 >gi|229030235|ref|ZP_04186292.1| uridine kinase [Bacillus cereus AH1271] gi|228731079|gb|EEL82004.1| uridine kinase [Bacillus cereus AH1271] Length = 186 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 59/222 (26%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLS 56 MN I+ + G GKTT L + L + +D + + T + Sbjct: 1 MNKKTKIITIAAVSGGGKTTVTENLTQKLTNSKALYFDSYHFKN-CPTDICKWIDE---G 56 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI--LLCDRFLDSSYAYQGERDSSQH 114 DE+ + + I+ + E K+ ++ D + +AY Sbjct: 57 ANYDEWVLTP------------LIHDIQHLIREDKVDYIILD-Y---PFAY------LNS 94 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR- 173 + + D TI +D P+DI + R R D+ E IH Sbjct: 95 EMREFI----------DATIFIDTPLDIAMARRILR---------DFKEDTIDEIHNDLK 135 Query: 174 ------RQIFLDIARN-QPDRCHIVDSAHSFQSVATNILNIV 208 R+ +L+ +P+ ++D + S + + + + Sbjct: 136 HYMTFARKAYLEAIHTVKPNSDIVLDGSLSVSEIMNHAVEEL 177 >gi|227509919|ref|ZP_03939968.1| deoxyguanosine kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227512853|ref|ZP_03942902.1| deoxyguanosine kinase [Lactobacillus buchneri ATCC 11577] gi|227522980|ref|ZP_03953029.1| deoxyguanosine kinase [Lactobacillus hilgardii ATCC 8290] gi|227083853|gb|EEI19165.1| deoxyguanosine kinase [Lactobacillus buchneri ATCC 11577] gi|227089798|gb|EEI25110.1| deoxyguanosine kinase [Lactobacillus hilgardii ATCC 8290] gi|227190639|gb|EEI70706.1| deoxyguanosine kinase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 212 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 44/227 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKT+ +L + L G E+ H + + + A + Sbjct: 9 GAGKTSLTHMLSKHL-------------GTPAYYESVDHNQILPLFYK-DPKKYAFLLQI 54 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQEISVQEVM-- 129 L+ I+ A + +L DR F DS + ++ + +Q +M Sbjct: 55 DFLNRRMADIKKAWKNEESVL-DRSIFEDSLLFHLNADLGRATETEVNIYDSLLQNMMQE 113 Query: 130 ---------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM-----IHEKRRQ 175 PD I +++ + L R++ R FE+ D ++ Q Sbjct: 114 LPHTSHSKNPDLLIHINISFETMLARIKKRGRP--------FEQIDNDPSLYQYYKDLNQ 165 Query: 176 IFLDIARNQPDRCHI-VDSAHSFQSVATNI-LNIVWELVQKRVSPLS 220 + N I ++ F V + + V++L+ ++++ L+ Sbjct: 166 RYQQWYENYDKSAKIQINGDR-FDFVEKDTDRHAVFDLIDQKINQLA 211 >gi|56963637|ref|YP_175368.1| cytidylate kinase [Bacillus clausii KSM-K16] gi|56909880|dbj|BAD64407.1| cytidylate kinase [Bacillus clausii KSM-K16] Length = 250 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 33/232 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59 M G ++ +G GAGK+T L D R AE L Sbjct: 26 MAKGFNVAIDGPAGAGKSTVAKKTAEKLGFLYIDTGAMYRAITFAALAEGID--LHDGKA 83 Query: 60 -DEFGAEAEAIVFAAARLDHVEN---VIRPALMEGKI------LLCDRFLDSSY-AYQGE 108 + ++E + ++ V I A+ ++ + R + A Q E Sbjct: 84 LGKLLEKSELRLESSNEGTAVFWNGADITAAIRTNEVNSNVSLVASHREVREGMTAMQQE 143 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNRY-SLRESACLDYFERK 165 S++ LD ++I V+PD + L V+ +R + R+ E FE+ Sbjct: 144 LAKSKNAVLDG-RDIGTH-VLPDANVKVFLTASVE---ERARRRHLEQLEKGLPSDFEQL 198 Query: 166 DVMIHEK-----RRQIF-LDIARNQPDRCHIVD-SAHSFQSVATNILNIVWE 210 I ++ R I L A + +VD ++ V IL++V E Sbjct: 199 KKDIAKRDELDSTRAIAPLKQAADA----QVVDTTSMGIDEVVETILDLVKE 246 >gi|150016810|ref|YP_001309064.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052] gi|149903275|gb|ABR34108.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052] Length = 277 Score = 40.4 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 8/59 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G FIS G G GKTT + ++ LQ + V V ++ R + L Sbjct: 54 IKEGEFISLLGPSGCGKTTLLRIIADLLQPSSGKVIV--------RGQSPREIRLQKKY 104 >gi|313681370|ref|YP_004059108.1| guanylate kinase [Sulfuricurvum kujiense DSM 16994] gi|313154230|gb|ADR32908.1| guanylate kinase [Sulfuricurvum kujiense DSM 16994] Length = 206 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 29/180 (16%) Query: 1 MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 MN G + G GAGK++ I +K + + + T P + + + Sbjct: 1 MNRQSGAILVLSGPSGAGKSSLIQKIKDQIGPIYFSISTTTRPIREGEVDGVHYYFVGVE 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + E E + A + ++ AL EGK+++ D QG Sbjct: 61 EFKRDIEDEMFLEYAVVHGNYYGTSLGPVKKALKEGKLVIFD------IDVQGHD----- 109 Query: 115 LFLDSLQEISVQEVMPDCT--IILDLP-VDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 +VQ + D T + + P ++ +R+ NR + E L E + Sbjct: 110 ---------AVQNRLSDITTSVFITTPSLEELKRRLYNRSTDSEEVILGRIEMAKREVQR 160 >gi|308159250|gb|EFO61792.1| Hypothetical protein GLP15_2179 [Giardia lamblia P15] Length = 352 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 17/35 (48%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 I +G GAGKTT I L+ L + V V E Sbjct: 98 LIVIDGPIGAGKTTFIEHLRDELVQSGARVRVIDE 132 >gi|312071485|ref|XP_003138630.1| srpr protein [Loa loa] gi|307766205|gb|EFO25439.1| srpr protein [Loa loa] Length = 662 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 15/138 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVD 60 I F G+ G GK+T+++ + +L + V + T A A + ++ Sbjct: 447 KRPYIIVFCGVNGVGKSTNLAKITFWLNENGHKVLIAA--ADTFRAGAVEQLRTHTMHLN 504 Query: 61 EFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + + I A+ G ++ +D+ R + Sbjct: 505 ALHPNSVQLYEQGYGKDPAGLTAAAISIAMERGTDVVM---VDT-----AGRMQDNEPLM 556 Query: 118 DSLQEISVQEVMPDCTII 135 SL ++ +Q PD + Sbjct: 557 RSLAKL-IQLNKPDLVLF 573 >gi|296221401|ref|XP_002756726.1| PREDICTED: L-seryl-tRNA(Sec) kinase-like [Callithrix jacchus] Length = 342 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 30/160 (18%) Query: 11 GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAA--------------EAARHVLL 55 G+ GAGK+T L L+ + + V V P A + R LL Sbjct: 25 GLPGAGKSTFARALAHRLRQEQGWAVGVVAYDDVMPDAFLAGASALPAPSQWKLLRQELL 84 Query: 56 SCGVDEFGAEAEAIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 A +A R + + L + ++ A+ E S Sbjct: 85 KYLEYFLMAVINGCQMSAPPDRTEAMWEDFTTCLKDQDLIFS-------AAF--EARSCY 135 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 L ++ S+ + LD P++ L+R R Sbjct: 136 LLTKTAVSRHSLGFCQ----LFLDCPLETCLQRNGQRPRA 171 >gi|284039605|ref|YP_003389535.1| signal recognition particle protein [Spirosoma linguale DSM 74] gi|283818898|gb|ADB40736.1| signal recognition particle protein [Spirosoma linguale DSM 74] Length = 439 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G++G+GKTT L +L+++ +V + PAA VL ++ G E Sbjct: 102 ILIAGLQGSGKTTFSGKLASYLKKQGRNVLLVAADIYRPAAIDQLKVL----GEQVGVEV 157 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCD 96 A + +N I A G KI++ D Sbjct: 158 YAEPENKNAVQIAQNAIALARKTGKKIVIVD 188 >gi|210134821|ref|YP_002301260.1| adenylate kinase [Helicobacter pylori P12] gi|210132789|gb|ACJ07780.1| adenylate kinase [Helicobacter pylori P12] Length = 191 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D + V H + R +FL Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + I++ S + + + + Sbjct: 151 DPLVAIQNFYKAKHLHKIINGERSIEEIVNEMQKYILSF 189 >gi|254818764|ref|ZP_05223765.1| adenylylsulfate kinase [Mycobacterium intracellulare ATCC 13950] Length = 231 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 17/148 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T +++++ L + ++ A +L E Sbjct: 23 HQGCVIWFTGLSGSGKSTVANIVEQKLYERGIRSYLLDGDNVRYGLNAGPELLEERHGPE 82 Query: 62 FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 F A R +++ + + G I L A+ + Sbjct: 83 FAKRFGLGFSAEDREENIRRIGAVAKLFCEAGVIALT--------AFISPYVRDRDAIRA 134 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 +L + QE I +D P+++ +R Sbjct: 135 TLGDGDFQE------IFIDTPIEVCEQR 156 >gi|288940858|ref|YP_003443098.1| adenylylsulfate kinase [Allochromatium vinosum DSM 180] gi|288896230|gb|ADC62066.1| adenylylsulfate kinase [Allochromatium vinosum DSM 180] Length = 228 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 77/222 (34%), Gaps = 34/222 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I G+ G+GK+T ++L L + V A+ +L +E Sbjct: 25 HRGCVIWLTGLSGSGKSTLANVLDHRLSERGIKTAVLDGDNVRHGLNASTGMLRETHGEE 84 Query: 62 FGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 F A R +++ + + G I L A+ + + Sbjct: 85 FAQRFGLGFTAIDREENIRRIGAVAQLFCEAGLIALT--------AFISPYRIDRRRVRN 136 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 S++E + + +D P+++ +R + Y + L +F D Sbjct: 137 SMRE---GDF---IEVFVDTPLEVCEQRDPKGLYKKARAGELKHFTGIDDPYE------- 183 Query: 178 LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRVSP 218 A P+ +V + + + +A ++ L+ +R+ P Sbjct: 184 ---APEAPE--LVVQAGERTPEELADEVIAY---LIDRRILP 217 >gi|77919480|ref|YP_357295.1| cytidylate kinase [Pelobacter carbinolicus DSM 2380] gi|123573951|sp|Q3A3D2|KCY_PELCD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|77545563|gb|ABA89125.1| cytidylate kinase [Pelobacter carbinolicus DSM 2380] Length = 235 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 18/34 (52%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34 MN L I+ +G G GK+T L + L+ N D Sbjct: 1 MNRQLIIAIDGPSGVGKSTLSRRLAQQLRYVNID 34 >gi|328867697|gb|EGG16079.1| adenylate kinase [Dictyostelium fasciculatum] Length = 574 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 33/154 (21%) Query: 79 VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ------EISVQEVMP-- 130 +E + RP G ++ D F ++ Q E + + + SL+ ++S P Sbjct: 257 LEELRRPEYRSG--VVVDGFPRTNT--QVECLTLLYEKMKSLRKNYFTTQLSSCFPRPVF 312 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACL-----------DYFERKDVMIHEKRRQIFLD 179 T++ + L R R + + L + + I KR +IF D Sbjct: 313 RVTVLF-IEEKESLDRQIRRGQITKETNLRLRAQDLPLLEERYTDTSEEIARKRYKIFRD 371 Query: 180 -------IARNQPDRCHIVDSAHSFQSVATNILN 206 + ++ P I+D++ S V +I+ Sbjct: 372 HYSTLTALKKHFP--FSIIDASKSINEVQQSIIK 403 >gi|288923197|ref|ZP_06417340.1| adenylate kinase [Frankia sp. EUN1f] gi|288345458|gb|EFC79844.1| adenylate kinase [Frankia sp. EUN1f] Length = 199 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 65/220 (29%), Gaps = 40/220 (18%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64 G GAGK T + + R T + + R E Sbjct: 4 VLLGPPGAGKGTQAARISA---RHGVPAISTGQLFDQQISAGTSLGRRAERYVRAGELVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A RL + L++G R Q LD + + S Sbjct: 61 DEIVLDIVADRLTTGADCGAGFLLDGF----------------PRTLPQAEALDRMLDAS 104 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + D + L + L R+ +R +L E D +R ++F A Sbjct: 105 CGPL--DVVMDLKVDQAEVLARI-SRRALSEGRVDD-----TAETARRRMEVFT--AETA 154 Query: 185 PDR--------CHIVDSAHSFQSVATNILNIVWELVQKRV 216 P R +D + + VA I + ++ ++ Sbjct: 155 PLRSHYGEQGLLRTIDGSGTPDDVAARIEEALTAVLHPQL 194 >gi|187929932|ref|YP_001900419.1| putative deoxyguanosine kinase [Ralstonia pickettii 12J] gi|187726822|gb|ACD27987.1| putative deoxyguanosine kinase (dGuo kinase) (DGK) protein [Ralstonia pickettii 12J] Length = 214 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 22/177 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT L L+ T + AR + Sbjct: 9 IVVEGPIGVGKTALAQRLADHLRAS------TLFETPAENSFIAR-FYEDPARYALPVQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSL-QEI 123 ++ A RL A + G+ ++ D FL D +A Q + + D++ + Sbjct: 62 RFLLQRAERL----KAWHKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMANAL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + D I L + L RV R E+ D E+ + ++ Sbjct: 117 ALPQQRIDLVICLQARAEDLLPRVTRRAVPYETGI-------DAEYLERICAAYGEL 166 >gi|48425494|pdb|1RZ3|A Chain A, Structure Of A Possible Uridine Kinase From Bacillus Stearothermophilus Length = 201 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 15/159 (9%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 GI+G +GKTT + L + L+ + V V E A+ G +E+ E Sbjct: 26 GIDGLSRSGKTTLANQLSQTLREQGISVCVFH--XDDHIVERAKRY--HTGNEEW---FE 78 Query: 68 AIVFAAARLDHVENVIRPALMEGKILL--CDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + R ++ L D D+ S + ++ + + Sbjct: 79 YYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDXIXIEGVF-LQR 137 Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 +E P D + LD P +I R ++ ++ + Sbjct: 138 KEWRPFFDFVVYLDCPREIRFARENDQVKQNIQKFINRY 176 >gi|326693445|ref|ZP_08230450.1| deoxyguanosine kinase [Leuconostoc argentinum KCTC 3773] Length = 214 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 76/240 (31%), Gaps = 51/240 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGKT+ +L L K P L ++G Sbjct: 2 IVLSGTIGAGKTSLTEMLADHLGSK----AFYESVDDNPILP-----LFYENPKKYGFLL 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQHL 115 + I+ A G + DR + D+ A Q E D + L Sbjct: 53 QIYFLNKRLAQ-----IKEARATGVRNILDRSIYEDALLFQLTADLDRATQTEVDIYKSL 107 Query: 116 FLDSLQEIS-VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRES--ACLDYFERKDVMIHE 171 + + EI+ V++V PD I + + D L R++ R E D Sbjct: 108 VDNMMAEIAGVEDVKNPDLLIHVRVSFDTMLARIKKRGRSFEQIDDNPD----------- 156 Query: 172 KRRQIFLDIARNQPDRC--------HIVDSAHSFQSVA-TNILNIVWELVQKRVSPLSSK 222 + ++ + D +D F V+ + V E++ +++ + K Sbjct: 157 -LYDYYKELNKRYDDWFDAYDRSPKVQIDGDR-FDFVSDADARAKVLEMIDSKLAEVQDK 214 >gi|325105453|ref|YP_004275107.1| guanylate kinase [Pedobacter saltans DSM 12145] gi|324974301|gb|ADY53285.1| guanylate kinase [Pedobacter saltans DSM 12145] Length = 189 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 56/174 (32%), Gaps = 26/174 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCG 58 M G I F GAGKTT + L K TR G + + + Sbjct: 1 MKQGKLIIFSAPSGAGKTTIVHHLLNKFPDKISFSISATTRSARGQEVDGKDYYFISNED 60 Query: 59 VDEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 A+ E + V+ +++ I+ EGK ++ D +D + Sbjct: 61 FLHKVAKHEFVEFEEVYTGTFYGTLKSEIQRIWDEGKHVIFD--ID-------VEGGLRL 111 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF---ERK 165 +++ P D+ +R+ R + E + F E++ Sbjct: 112 KKKYGENALAIFVQPPSL--------DVLKQRLAGRGTDSEEKLKERFAKAEKE 157 >gi|225851604|ref|YP_002731837.1| putative fructose transport system kinase [Brucella melitensis ATCC 23457] gi|256045851|ref|ZP_05448726.1| putative fructose transport system kinase [Brucella melitensis bv. 1 str. Rev.1] gi|256112565|ref|ZP_05453486.1| putative fructose transport system kinase [Brucella melitensis bv. 3 str. Ether] gi|225639969|gb|ACN99882.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] Length = 232 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 41 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190 >gi|170084059|ref|XP_001873253.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650805|gb|EDR15045.1| predicted protein [Laccaria bicolor S238N-H82] Length = 176 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 46/169 (27%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR--FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G I G G GK+TH LL L ++ +V E + L Sbjct: 1 MAKGPVIVITGTPGTGKSTHAQLLVEEAALPLRHINV-----------GEWVKEKEL--- 46 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +EF E E+ R + + + P + EG ++ LD Sbjct: 47 YEEFDQEWESYTVDEDR---LLDELEPIIAEGGVI-----------------------LD 80 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY----SLRESACLDYFE 163 E PD ++L R++ R ++E+ + E Sbjct: 81 WHTCEMFPERWPDLVVVLRCDHSTIWDRLEKRGYSLKKIQENNEAEIME 129 >gi|145479919|ref|XP_001425982.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124393054|emb|CAK58584.1| unnamed protein product [Paramecium tetraurelia] Length = 1384 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 72/226 (31%), Gaps = 59/226 (26%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F G GAGK T + + + + VH+ A + R E + Sbjct: 1199 FFVL-GGPGAGKGTQSAKMVE----RYHFVHL-------SAGDLLRE--------ERSKK 1238 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLFLDSL-- 120 + + +E +I+ G+I+ + S A Q + + +D Sbjct: 1239 TQ-------NAELIEEIIK----SGQIVPS--HITISLLESAMQ-AKGLDKMFLIDGFPR 1284 Query: 121 QEISVQ---EVMPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMI 169 + + ++M D + + R++ R D E ++ Sbjct: 1285 NQENFDVWIKLMGDKVEFKKLFYFECDEETLKNRIKIRAQ-ESGRSDDNDETLVKRLKTY 1343 Query: 170 HEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +E R Q F +++ C + + + V I + E++ Sbjct: 1344 NESTRPIIQHFDSLSQ-----CIHIKADKPIEEVFQEITKKLDEIL 1384 >gi|156231006|ref|NP_001093554.1| adenylate kinase isoenzyme 5 [Danio rerio] gi|148725385|emb|CAN88475.1| novel protein similar to vertebrate adenylate cyclase family [Danio rerio] gi|148725426|emb|CAN88397.1| novel protein similar to vertebrate adenylate cyclase family [Danio rerio] gi|148725808|emb|CAN88062.1| novel protein similar to vertebrate adenylate cyclase family [Danio rerio] Length = 563 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 59/209 (28%), Gaps = 43/209 (20%) Query: 11 GIEGAGKTTHISLLKRF--LQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK ++ L+R + E + R +L ++ + Sbjct: 384 GGPGSGKALQSEKIEERYSLKRLCPGDILCSELQSHSERGRFLRDLL--ERGEQLPEDTL 441 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD--SLQEISV 125 + A S QG+ + QE Sbjct: 442 LDLLCEAMA-------------------------STVRQGKGFLVTGFPKNEKQAQEYEA 476 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR--- 182 + PD ++L+ DI +R+Q R + + +R F + Sbjct: 477 KMGQPDIVLLLECSADIMSRRLQQRATCSLHSKE-----ARDRDTRRRVDGFCSLINPVV 531 Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIV 208 + H +D+ + V +I ++ Sbjct: 532 AHYQHREFFHKIDAEQPPEDVFEHICVVL 560 >gi|82698985|ref|YP_413559.1| putative fructose transport system kinase [Brucella melitensis biovar Abortus 2308] gi|189023322|ref|YP_001934090.1| Uridine kinase [Brucella abortus S19] gi|254690372|ref|ZP_05153626.1| putative fructose transport system kinase [Brucella abortus bv. 6 str. 870] gi|254694860|ref|ZP_05156688.1| putative fructose transport system kinase [Brucella abortus bv. 3 str. Tulya] gi|254696489|ref|ZP_05158317.1| putative fructose transport system kinase [Brucella abortus bv. 2 str. 86/8/59] gi|254731402|ref|ZP_05189980.1| putative fructose transport system kinase [Brucella abortus bv. 4 str. 292] gi|256258626|ref|ZP_05464162.1| putative fructose transport system kinase [Brucella abortus bv. 9 str. C68] gi|297247464|ref|ZP_06931182.1| fructose transport system kinase [Brucella abortus bv. 5 str. B3196] gi|82615086|emb|CAJ10015.1| Uridine kinase:ATP/GTP-binding site motif A (P-loop) [Brucella melitensis biovar Abortus 2308] gi|189018894|gb|ACD71616.1| Uridine kinase [Brucella abortus S19] gi|297174633|gb|EFH33980.1| fructose transport system kinase [Brucella abortus bv. 5 str. B3196] Length = 232 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 41 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190 >gi|329923749|ref|ZP_08279144.1| ferrichrome ABC transporter, ATP-binding protein FhuC [Paenibacillus sp. HGF5] gi|328941115|gb|EGG37417.1| ferrichrome ABC transporter, ATP-binding protein FhuC [Paenibacillus sp. HGF5] Length = 261 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 9/56 (16%) Query: 7 ISFE--------GIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHV 53 ISFE G G GK+T + L R L+ V + +P + AR + Sbjct: 24 ISFEKGSVYSIIGPNGCGKSTLLKALARQLKPAGGQVLLDSKPLSDLNGKDVARQL 79 >gi|312622717|ref|YP_004024330.1| guanylate kinase [Caldicellulosiruptor kronotskyensis 2002] gi|312203184|gb|ADQ46511.1| guanylate kinase [Caldicellulosiruptor kronotskyensis 2002] Length = 199 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 74/227 (32%), Gaps = 50/227 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M GL I G G GK T + L + TR+P + Sbjct: 1 MKEGLLIVISGPAGTGKGTVVGRLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + +A ++ ++ + AL +G ++ L Sbjct: 61 EEEIKNERFLEYAEYNNNYYGTPKDFVFEALGKGYDVI--------------------LE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +++ + +++V D +I LP + KR+ R + E E Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLIKRGTESEDEIRARLE----------- 149 Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215 IA+++ P+ +++ + A I I+ E ++ R Sbjct: 150 -----IAKSEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189 >gi|294501642|ref|YP_003565342.1| adenylylsulfate kinase [Bacillus megaterium QM B1551] gi|294351579|gb|ADE71908.1| adenylylsulfate kinase [Bacillus megaterium QM B1551] Length = 199 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + + L KN R+ +L FG Sbjct: 32 FTGLSGSGKSTVANAVAKALFDKN-----------------IRNYVLDGDNVRFGLNKNL 74 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 A R +++ V + + G+++L Sbjct: 75 GFSAEDRTENIRRIGEVSKLFVDSGQVVLT 104 >gi|226499152|ref|NP_001147633.1| adenylate kinase1 [Zea mays] gi|195612740|gb|ACG28200.1| adenylate kinase [Zea mays] Length = 284 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 63/238 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G +GK T L+K Q + + R + + + A+ Sbjct: 72 ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 118 Query: 69 IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + V + I +P E L D + S SQ + L+ Sbjct: 119 ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 165 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164 +L+ + PD I+LD+P ++ ++RV R + Sbjct: 166 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 219 Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + EK Q + + V + +V I ++ +++K+ Sbjct: 220 RFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 277 >gi|197294243|ref|YP_001798784.1| guanylate kinase [Candidatus Phytoplasma australiense] gi|171853570|emb|CAM11440.1| Guanylate kinase [Candidatus Phytoplasma australiense] Length = 212 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 34/179 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLS 56 GL I G G GK T L + KN++ TR+P E + L+ Sbjct: 5 QKGLLIVLSGPSGVGKATVRKAL---FEMKNHNFVYSISSTTRKPRLGEQ-EGKDYYFLT 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 E G + + A +D+ + L EGK + Sbjct: 61 KEEFELGIKNNKFLEWAKFIDNYYGTSRKQVEDYLKEGKEVFL----------------- 103 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMI 169 + ++ ++ ++ + I +P + + +R++ R + + D Sbjct: 104 -EIEVEGATQLRKKKFR-NAVFIFLVPPEKKVLYERLKKRGTESADKIQQRIMKADKEF 160 >gi|150020866|ref|YP_001306220.1| adenylate kinase [Thermosipho melanesiensis BI429] gi|166220003|sp|A6LLN4|KAD_THEM4 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|149793387|gb|ABR30835.1| Adenylate kinase [Thermosipho melanesiensis BI429] Length = 214 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 48/232 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G GAGK T+ LK L T G E + L V++ Sbjct: 3 IVFLGPPGAGKGTYAKELKEIL---GIPHIST---GDMFREEISAKSELGRKVEDILKRG 56 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E + + E + +P +G + D + + A D L + + Sbjct: 57 ELVPDDLTNVIVKERLSKPDCKKGF--ILDGYPR-TVAQAKALDEILKKLGREL-KFA-- 110 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFERKDV 167 I ++ D+ +KR+ NR + + + ++R+D Sbjct: 111 -------IYFEVSEDVVVKRISNRRICKNCGKIYNLITLPPKINGKCDVCGGELYQRED- 162 Query: 168 MIHEKRRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILNIVWE 210 E R+ + + ++ VD + SV +LNI+ Sbjct: 163 DREEVVRRRYKVYMDNTYPVIEYYRKSNKLFTVDGSMDVDSVIKEVLNIIRR 214 >gi|160880209|ref|YP_001559177.1| hypothetical protein Cphy_2070 [Clostridium phytofermentans ISDg] gi|160428875|gb|ABX42438.1| hypothetical protein Cphy_2070 [Clostridium phytofermentans ISDg] Length = 262 Score = 40.4 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 M + +FI EG+ G GK+T + L L+ Y V Sbjct: 1 MKNIIFI--EGVSGVGKSTTVHKLSDKLRSLGYSVK 34 >gi|310288003|ref|YP_003939262.1| Adenylate kinase [Bifidobacterium bifidum S17] gi|311064876|ref|YP_003971602.1| adenylate kinase [Bifidobacterium bifidum PRL2010] gi|309251940|gb|ADO53688.1| Adenylate kinase [Bifidobacterium bifidum S17] gi|310867196|gb|ADP36565.1| Adk Adenylate kinase [Bifidobacterium bifidum PRL2010] Length = 187 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 41/211 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G +G GK T +LL T G L ++ + E + Sbjct: 7 GPQGVGKGTQAALLAEHY---GIPAIST---GDIFRYNIKNKTELGLEALKYTDKGELVP 60 Query: 71 FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEISV 125 + +++ L + +L D + R++SQ LD+ L+E+ Sbjct: 61 -----DELTNKIVKDRLAMDDAKNGWIL-DGY---------PRNASQVKALDAMLEELGT 105 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181 D + LD D+ ++R+ R + D E KR + + Sbjct: 106 PL---DKVVALDADHDVLMQRIAKRAQ-EQGRSDDTPEA-----IAKRLATYAKETAPLL 156 Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWE 210 R +D ++ NI+ + + Sbjct: 157 DTYKSRGQLVAIDGVGDIDAIQANIVAALSD 187 >gi|300724327|ref|YP_003713645.1| putative bifunctional sulfate adenylyltransferase/adenylyl-sulfate kinase [Xenorhabdus nematophila ATCC 19061] gi|297630862|emb|CBJ91533.1| putative bifunctional enzyme: sulfate adenylyltransferase and Adenylyl-sulfate kinase [Xenorhabdus nematophila ATCC 19061] Length = 642 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 34/95 (35%), Gaps = 20/95 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I F G+ G+GK+T + L++ L + + +L Sbjct: 467 HRGKVIWFTGLPGSGKSTLANALEQELYNQGKSTY-----------------VLDGDNIR 509 Query: 62 FGAEAEAIVFAAARLD---HVENVIRPALMEGKIL 93 G + A R++ V V R + G I+ Sbjct: 510 QGINKDLGFTDADRVENIRRVAEVARLMMDAGLIV 544 >gi|66818279|ref|XP_642799.1| signal recognition particle receptor alpha subunit [Dictyostelium discoideum AX4] gi|74856964|sp|Q54ZR7|SRPR_DICDI RecName: Full=Signal recognition particle receptor subunit alpha; Short=SR-alpha; Short=Signal recognition particle receptor; AltName: Full=Docking protein alpha; Short=DP-alpha gi|60470903|gb|EAL68875.1| signal recognition particle receptor alpha subunit [Dictyostelium discoideum AX4] Length = 615 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 13/129 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GK+T+++ + +L Y + T + A L D Sbjct: 410 IVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAA--CDTFRSGAIEQ--LKTHADRLNVHL 465 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ ++ I A G ++ +D++ R + + +L ++ Q Sbjct: 466 FERGYSKDAASVAQDAIAFAKDTGYDVVL---IDTT-----GRMQNNEPLMKALSKLVNQ 517 Query: 127 EVMPDCTII 135 + D + Sbjct: 518 NNV-DLVLF 525 >gi|320166184|gb|EFW43083.1| adenylate kinase [Capsaspora owczarzaki ATCC 30864] Length = 229 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 62/218 (28%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + VH++ +L + E Sbjct: 48 GGPGSGKGTQCERIVQEF---GF-VHLSAG-----------DLLRAERAKPASKNGEL-- 90 Query: 71 FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125 I + EGKI+ + + A + ++ +D + +V Sbjct: 91 ------------IDKYIREGKIVPVQI----TCTLLAEAMALNPTKSFLIDGFPRNQDNV 134 Query: 126 QE----VMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 V P D + D P ++R R L D E H + Sbjct: 135 AGWDAVVGPSVNLDFVLFFDCPEATCVQRALQRG-LTSGRTDDNKESLTKRFH-----TY 188 Query: 178 LDIARNQP-----DR---CHIVDSAHSFQSVATNILNI 207 + P DR +DS S V ++ + Sbjct: 189 E--SETMPIVNYFDRKGLVRKIDSTRSVDEVFADVKKV 224 >gi|319956651|ref|YP_004167914.1| adenylate kinase [Nitratifractor salsuginis DSM 16511] gi|319419055|gb|ADV46165.1| Adenylate kinase [Nitratifractor salsuginis DSM 16511] Length = 199 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 43/223 (19%), Positives = 80/223 (35%), Gaps = 42/223 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LF+ G G+GKTT ++ +N D V E R + S Sbjct: 1 MAKKLFLII-GAPGSGKTTDAEIIAE----RNPDSVV-----HYSTGEMLRQEVASGS-- 48 Query: 61 EFGAEAEAIVFAAAR--LDHVENVIRPALME--GKILLCD---RFLDSSYAYQGERDSSQ 113 E G E E+ + A LD V N I A+ +I+L D R ++ A Sbjct: 49 ELGKEIESYISRGALVPLDIVINTIVNAVKNAPKEIILIDGFPRSVEQMKALDEILSKDP 108 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L ++ E+ + + +R+ R E D + ++V ++ Sbjct: 109 EIELKAVIEV-------------RVSEAVARERILGRAEEAEVKRSD--DNEEV-FKQRM 152 Query: 174 RQIFL----DIAR--NQPDRCHIVDSAHSFQSVATNILNIVWE 210 +I+L +I + + ++D + + + + E Sbjct: 153 -KIYLDPLPEIEKFYEEKGLLKVIDGERPIEPIVEEMEAFIKE 194 >gi|148909626|gb|ABR17904.1| unknown [Picea sitchensis] Length = 338 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 53/149 (35%), Gaps = 36/149 (24%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L R L + +T +L Sbjct: 159 QKGCVIWITGLSGSGKSTLACALSRVLHSRGR---LTY--------------ILDGDNVR 201 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117 G A R +++ V R + G ++C + S + YQ +RD+ + L Sbjct: 202 HGLNKNLSFSAEDRAENIRRIGEVARLFVDAG--VIC---ITSLISPYQRDRDACRALL- 255 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + + I +D P++I +R Sbjct: 256 -----PVGEFIE----IFMDFPLEICEQR 275 >gi|149277912|ref|ZP_01884052.1| adenylyl-sulfate kinase [Pedobacter sp. BAL39] gi|149231600|gb|EDM36979.1| adenylyl-sulfate kinase [Pedobacter sp. BAL39] Length = 182 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 38/164 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T L+ L + R G L G Sbjct: 17 GLSGAGKSTIAVALEAMLTEN--QLFCVRLDGDG---------LRDGVNKGLG------F 59 Query: 71 FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A R ++V + R I++C S L+ +EI+ Sbjct: 60 THADRAENVRRTSEIARLLCNNNVIVIC----------------SLITPLNEHREIARSI 103 Query: 128 VMPDCT-IILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMI 169 + D + +D P+++ +R V+ Y + ++ F Sbjct: 104 LKEDLLEVFVDCPLEVCEQRDVKGLYRKARNHQINKFSGVSSEF 147 >gi|126736680|ref|ZP_01752419.1| putative fructose transport system kinase [Roseobacter sp. CCS2] gi|126713795|gb|EBA10667.1| putative fructose transport system kinase [Roseobacter sp. CCS2] Length = 213 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 16/38 (42%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 + ++ G G GK+T S L R L + V G Sbjct: 23 MLVAITGAPGCGKSTLASELARRLNAQGRKAIVVPMDG 60 >gi|289449964|ref|YP_003475731.1| guanylate kinase [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184511|gb|ADC90936.1| guanylate kinase [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 206 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 6/100 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G G GK T I+ K + + V TR P + + + Sbjct: 7 QQGLLICVSGPSGVGKGTVIAAAKELCRNLVHSVSVTTRAPRLGEIEGVSYYFRSKTNFE 66 Query: 61 EFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCD 96 + A+ E + +H I + G ++ D Sbjct: 67 QMLADGEILEHDCY-CEHYYGTPLRPIEEKMRAGIDVIMD 105 >gi|260563141|ref|ZP_05833627.1| uridine kinase [Brucella melitensis bv. 1 str. 16M] gi|265992267|ref|ZP_06104824.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994007|ref|ZP_06106564.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|265999689|ref|ZP_05467420.2| uridine kinase [Brucella melitensis bv. 2 str. 63/9] gi|260153157|gb|EEW88249.1| uridine kinase [Brucella melitensis bv. 1 str. 16M] gi|262764988|gb|EEZ10909.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263003333|gb|EEZ15626.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263095342|gb|EEZ18969.1| uridine kinase [Brucella melitensis bv. 2 str. 63/9] gi|326408074|gb|ADZ65139.1| putative fructose transport system kinase [Brucella melitensis M28] gi|326537790|gb|ADZ86005.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 218 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 27 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 87 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176 >gi|119715340|ref|YP_922305.1| exonuclease V subunit alpha [Nocardioides sp. JS614] gi|119536001|gb|ABL80618.1| ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member-like protein [Nocardioides sp. JS614] Length = 872 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 17/35 (48%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 G + EG GAGKTT + + L R + + V Sbjct: 452 GQLVVVEGAAGAGKTTALRATRELLARHGHRLVVV 486 >gi|62289048|ref|YP_220841.1| putative fructose transport system kinase [Brucella abortus bv. 1 str. 9-941] gi|260546341|ref|ZP_05822081.1| uridine kinase [Brucella abortus NCTC 8038] gi|260755918|ref|ZP_05868266.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260759142|ref|ZP_05871490.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260760866|ref|ZP_05873209.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884941|ref|ZP_05896555.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261215193|ref|ZP_05929474.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|62195180|gb|AAX73480.1| kinase-related protein [Brucella abortus bv. 1 str. 9-941] gi|260096448|gb|EEW80324.1| uridine kinase [Brucella abortus NCTC 8038] gi|260669460|gb|EEX56400.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260671298|gb|EEX58119.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260676026|gb|EEX62847.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260874469|gb|EEX81538.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260916800|gb|EEX83661.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 218 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 27 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 87 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176 >gi|23500977|ref|NP_697104.1| putative fructose transport system kinase [Brucella suis 1330] gi|161618051|ref|YP_001591938.1| putative fructose transport system kinase [Brucella canis ATCC 23365] gi|163842338|ref|YP_001626742.1| putative fructose transport system kinase [Brucella suis ATCC 23445] gi|254700875|ref|ZP_05162703.1| putative fructose transport system kinase [Brucella suis bv. 5 str. 513] gi|254705241|ref|ZP_05167069.1| putative fructose transport system kinase [Brucella suis bv. 3 str. 686] gi|254707240|ref|ZP_05169068.1| putative fructose transport system kinase [Brucella pinnipedialis M163/99/10] gi|254709218|ref|ZP_05171029.1| putative fructose transport system kinase [Brucella pinnipedialis B2/94] gi|254713360|ref|ZP_05175171.1| putative fructose transport system kinase [Brucella ceti M644/93/1] gi|254716285|ref|ZP_05178096.1| putative fructose transport system kinase [Brucella ceti M13/05/1] gi|256030741|ref|ZP_05444355.1| putative fructose transport system kinase [Brucella pinnipedialis M292/94/1] gi|256158755|ref|ZP_05456625.1| putative fructose transport system kinase [Brucella ceti M490/95/1] gi|256254147|ref|ZP_05459683.1| putative fructose transport system kinase [Brucella ceti B1/94] gi|260169645|ref|ZP_05756456.1| putative fructose transport system kinase [Brucella sp. F5/99] gi|23346835|gb|AAN29019.1| kinase-related protein [Brucella suis 1330] gi|161334862|gb|ABX61167.1| Hypothetical protein BCAN_A0063 [Brucella canis ATCC 23365] gi|163673061|gb|ABY37172.1| Hypothetical protein BSUIS_A0065 [Brucella suis ATCC 23445] Length = 232 Score = 40.4 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 41 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 190 >gi|294461870|gb|ADE76492.1| unknown [Picea sitchensis] Length = 188 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 18/127 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64 G G+GK+T+ L++ + VH+ E A R ++ L +DE Sbjct: 9 GPAGSGKSTYCYNLQQHCESIGRSVHIVNLDPAAEDFKYSVAIDIRELISLEDVMDELNL 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-------HLFL 117 + ++H+E + L E L D D + F+ Sbjct: 69 GPNGGLIYC--MEHLEENLEDWLAEQ---LEDYLDDDYLVFDCPGQIELYSHIPVFRTFV 123 Query: 118 DSLQEIS 124 D L+ + Sbjct: 124 DQLRRWN 130 >gi|227893866|ref|ZP_04011671.1| deoxyguanosine kinase [Lactobacillus ultunensis DSM 16047] gi|227864355|gb|EEJ71776.1| deoxyguanosine kinase [Lactobacillus ultunensis DSM 16047] Length = 228 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 31/168 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121 + A + L+ + I+ AL + +L DR + + +Q D + +D+ Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTQDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106 Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E+ + E+ PD + +++ D +KR++ R E D Sbjct: 107 ELLHNMMGELKRMPKKNPDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 154 >gi|224827259|ref|ZP_03700353.1| signal recognition particle-docking protein FtsY [Lutiella nitroferrum 2002] gi|224600548|gb|EEG06737.1| signal recognition particle-docking protein FtsY [Lutiella nitroferrum 2002] Length = 358 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L ++ Q + V + G T A A ++ + A+ Sbjct: 165 GVNGAGKTTSIGKLAKYFQSQGKSVLLAA--GDTFRAAAREQLIAWGERNNVTVIAQQ-- 220 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + + I+ A G I+L D Sbjct: 221 -SGDSAAVCFDAIKAAQARGIDIVLAD 246 >gi|118474779|ref|YP_892249.1| PvdS [Campylobacter fetus subsp. fetus 82-40] gi|118414005|gb|ABK82425.1| PvdS [Campylobacter fetus subsp. fetus 82-40] Length = 276 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 26/95 (27%), Gaps = 28/95 (29%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG + +GK I L L + V +P + Sbjct: 46 LIIIEGRDASGKGGVIKRLTEHLNPRGCRVVALEKPSDVERTQW---------------- 89 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + DH+ G+I++ DR Sbjct: 90 -----YFQRYSDHLP-------SAGEIVIFDRSWY 112 >gi|86609333|ref|YP_478095.1| CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557875|gb|ABD02832.1| CobQ/CobB/MinD/ParA nucleotide binding domain [Synechococcus sp. JA-2-3B'a(2-13)] Length = 266 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 6/78 (7%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GKTT L L + V +P G + + E AE I+ A Sbjct: 17 GSGKTTAALNLAIMLAEHGKTLAVDFDPQGN-----LSQWMGWTDLSESATIAETILPGA 71 Query: 74 ARLDHVENVIRPALMEGK 91 R+ H+ +IRP L E + Sbjct: 72 DRV-HIREIIRPPLNEDR 88 >gi|321472925|gb|EFX83894.1| hypothetical protein DAPPUDRAFT_47611 [Daphnia pulex] Length = 212 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 76/220 (34%), Gaps = 37/220 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++GL I GAGKTT L +R + T P E + LS Sbjct: 1 MSNGLLIILSSPSGAGKTTVCRRLLAEDERLMLSISATTGPPRAAEKEGMDYFFLSPEAF 60 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A + A LD+ ++ EGK +L D +D +QG R SQ + Sbjct: 61 HAWILEGAFLEYAPVLDNWYGTPREAVQARFAEGKDILFD--VD----WQGGRAISQKI- 113 Query: 117 LDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 P+ T+ I LP LK ++ R R + + Q Sbjct: 114 -------------PERTVRIFILPP--SLKELERRLKGRNQDPEEII-------QRRMAQ 151 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQK 214 +I+ +V+ N+ +I+ E ++K Sbjct: 152 AQQEISHWAEYDYVLVN--EDLDETVHNVKSIIQAERLKK 189 >gi|315178771|gb|ADT85685.1| signal recognition particle GTPase [Vibrio furnissii NCTC 11218] Length = 403 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 206 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQIWGERNNVPVIAQH-- 261 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 262 TGADSASVIYDAIEAAKARGVDVVIAD 288 >gi|78212579|ref|YP_381358.1| hypothetical protein Syncc9605_1045 [Synechococcus sp. CC9605] gi|78197038|gb|ABB34803.1| conserved hypothetical protein [Synechococcus sp. CC9605] Length = 179 Score = 40.0 bits (93), Expect = 0.21, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 20/86 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK+T ++L L +V T +A R L + +E Sbjct: 13 GPPGSGKSTLAAILAPLLSA---EVIST---------DALRE-QLWGDANVQSPWSELEP 59 Query: 71 FAAARLDHVENVIRPALMEGKILLCD 96 H+ I A+ +G +L D Sbjct: 60 -------HLHGAIDRAIADGDNVLVD 78 >gi|261218064|ref|ZP_05932345.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261221292|ref|ZP_05935573.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261314721|ref|ZP_05953918.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261316721|ref|ZP_05955918.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261321088|ref|ZP_05960285.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261751387|ref|ZP_05995096.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261755951|ref|ZP_05999660.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261759177|ref|ZP_06002886.1| uridine kinase [Brucella sp. F5/99] gi|265987792|ref|ZP_06100349.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265997253|ref|ZP_06109810.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260919876|gb|EEX86529.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260923153|gb|EEX89721.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261293778|gb|EEX97274.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261295944|gb|EEX99440.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261303747|gb|EEY07244.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261739161|gb|EEY27157.1| uridine kinase [Brucella sp. F5/99] gi|261741140|gb|EEY29066.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261745704|gb|EEY33630.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262551721|gb|EEZ07711.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264659989|gb|EEZ30250.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 218 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 27 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 86 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 87 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176 >gi|163846277|ref|YP_001634321.1| adenylylsulfate kinase [Chloroflexus aurantiacus J-10-fl] gi|163667566|gb|ABY33932.1| Adenylyl-sulfate kinase [Chloroflexus aurantiacus J-10-fl] Length = 188 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 18/34 (52%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 SGL + F G+ GAGKTT L LQ Y V Sbjct: 10 RSGLVVWFTGLSGAGKTTLARALATLLQEAGYPV 43 >gi|256395670|ref|YP_003117234.1| uridine kinase [Catenulispora acidiphila DSM 44928] gi|256361896|gb|ACU75393.1| uridine kinase [Catenulispora acidiphila DSM 44928] Length = 248 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 25/159 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ +G +GKTT L L+ + DV T + P AE R S Sbjct: 48 VAIDGAPASGKTTLADELATVLRAQGRDVIRATIDDFLFPRAERYRRGQYS--------- 98 Query: 66 AEAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 AE+ F A + V+ L G + + DR D+ + + + L Sbjct: 99 AESCYFDAHDRAALCRVLLDPLGPGGDRKFQTSVYDRDTDTPLSLPAAAAPTDAVLLFD- 157 Query: 121 QEISVQEVMPDCT------IILDLPVDIGLKRVQNRYSL 153 V + P+ I + LP++ + R ++R + Sbjct: 158 ---GVFLLRPELIDRWDLRIFVSLPLEQTIDRARSRGTA 193 >gi|222524033|ref|YP_002568503.1| adenylylsulfate kinase [Chloroflexus sp. Y-400-fl] gi|254766499|sp|B9LKC1|CYSC_CHLSY RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|222447912|gb|ACM52178.1| Adenylyl-sulfate kinase [Chloroflexus sp. Y-400-fl] Length = 186 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 18/34 (52%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 SGL + F G+ GAGKTT L LQ Y V Sbjct: 8 RSGLVVWFTGLSGAGKTTLARALATLLQEAGYPV 41 >gi|34499658|ref|NP_903873.1| cell division protein FtsY [Chromobacterium violaceum ATCC 12472] gi|34105508|gb|AAQ61863.1| cell division protein FtsY [Chromobacterium violaceum ATCC 12472] Length = 375 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L ++ Q + V + G T A A ++ + A+ Sbjct: 182 GVNGAGKTTSIGKLAKYYQSQGKSVLLAA--GDTFRAAAREQLIAWGERNNVTVIAQQ-- 237 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + I+ A+ G I+L D R +Q ++ ++++ +Q+ Sbjct: 238 -GGDSAAVCYDAIQAAIARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVIQK 287 Query: 128 VMPD----CTIILD 137 +PD ++LD Sbjct: 288 ALPDAPHEVVLVLD 301 >gi|89898640|ref|YP_515750.1| cytidylate kinase [Chlamydophila felis Fe/C-56] gi|123482865|sp|Q253D3|KCY_CHLFF RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|89332012|dbj|BAE81605.1| cytidylate kinase [Chlamydophila felis Fe/C-56] Length = 216 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + L+ Sbjct: 1 MIITIDGPSGTGKSTVAKALAQRLK 25 >gi|118579776|ref|YP_901026.1| cytidylate kinase [Pelobacter propionicus DSM 2379] gi|118502486|gb|ABK98968.1| cytidylate kinase [Pelobacter propionicus DSM 2379] Length = 233 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 16/26 (61%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL 28 GL I+ +G GAGK+T LL + L Sbjct: 6 RGLVIAIDGPSGAGKSTIARLLAKRL 31 >gi|256077332|ref|XP_002574960.1| thymidine kinase [Schistosoma mansoni] gi|238660179|emb|CAZ31193.1| thymidine kinase, putative [Schistosoma mansoni] Length = 945 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 19/201 (9%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-EAE 67 EG G GK+T + ++ L KN +H ++ +A+ Sbjct: 2 VEGNIGCGKSTFLRYFQQ-LSPKNEVMHEPLYLWKDARGYDLFELMYHDQRRWSVPFQAQ 60 Query: 68 AIVFAAARLDHVENVIRP--ALMEGKILLCDRFLDS-SYAYQGERDSSQHLFLDSLQEIS 124 +V R + +P L R+ + + G + + L + + Sbjct: 61 VLVTLLDR--QSKPPTKPVRLLERSIH--SSRYCFTENMHNNGSISDADYEELLKIFQWI 116 Query: 125 VQEV-MP-DCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFL--D 179 ++ +P D + L + +R++ R E L Y E +HE + +L Sbjct: 117 LKNKSVPVDLIVYLRASPTVCFERLRARNRSGEEDIPLKYLE----DLHE-LHEAWLIER 171 Query: 180 IARNQPDRCHIVDSAHSFQSV 200 P + D + Sbjct: 172 RFGQLPAPILVFDCNAPLPEL 192 >gi|320451077|ref|YP_004203173.1| cytidylate kinase [Thermus scotoductus SA-01] gi|320151246|gb|ADW22624.1| cytidylate kinase [Thermus scotoductus SA-01] Length = 212 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 77/224 (34%), Gaps = 36/224 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFL----QRKNY----DVHVTREPGGTPAAEAARHVLLSCG 58 ++ +G +GK++ + L ++ R G P E LL Sbjct: 5 VTIDGPSASGKSSVAKKVAEALGVPYLSSGLLYRAAAYLARRVGVDPGDEPGILALLETY 64 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + A + +E++ P L ++ DR + S A + + L Sbjct: 65 RVRLLPEVQGNRVVAEKASTLEDL-TPYLHTPEV---DR-VVSQVARHPGVRAWVNERLR 119 Query: 119 SL----------QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + +V P L ++ R + R R DY E + Sbjct: 120 EVPPPFVAEGRDMGTAVFPQAPHK-FYLTATPEV---RARRRTLERPQ---DYQE----V 168 Query: 169 IHEKRRQIFLDIARNQPD-RCHIVDSAH-SFQSVATNILNIVWE 210 + E R+ LD A++ P ++D++ + + V +L+ + + Sbjct: 169 LQELIRRDELDRAQSAPAPEAIVIDTSGMTLEEVVARVLSHIQD 212 >gi|184200282|ref|YP_001854489.1| adenylate kinase [Kocuria rhizophila DC2201] gi|259494008|sp|B2GJ13|KAD_KOCRD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|183580512|dbj|BAG28983.1| adenylate kinase [Kocuria rhizophila DC2201] Length = 188 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 65/219 (29%), Gaps = 40/219 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSC 57 M + I G GAGK T + + L T + E R Sbjct: 1 MTR-MLII--GPPGAGKGTQAARISERL---GVPAISTGDIFRANIKDQTELGREAQRYT 54 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++ RL H E+V L++G R +Q L Sbjct: 55 DAGNLVPDSVTNEMVRDRLSH-EDVSGGFLLDGY----------------PRTVAQVEEL 97 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 D + E + + D ++L D + R+ R +E D + +DV+ H ++ Sbjct: 98 DRILEANGVGL--DVVLLLTADNDELVSRLLGR--AQEQGRTD--DTEDVIRHR--LDVY 149 Query: 178 LDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWE 210 + VD S V I+ + Sbjct: 150 DEQTAPVVGVYEDRGIVVRVDGLGSIDHVTERIMAALER 188 >gi|156387610|ref|XP_001634296.1| predicted protein [Nematostella vectensis] gi|156221377|gb|EDO42233.1| predicted protein [Nematostella vectensis] Length = 191 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 5/95 (5%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GK+T + L K + + V H TR+P + +++ Sbjct: 6 IVIHGPSGSGKSTLVKRLMKEYPDTFGFSVSHTTRQPRPGEINGKDYNFTERGIMEKAIE 65 Query: 65 EAEAIVFAAARLDHV---ENVIRPALMEGKILLCD 96 E + FA + + ++ + GK+ + D Sbjct: 66 NGEFLEFAEYNQNLYGTSKKAVQDVIHVGKVCILD 100 >gi|148263531|ref|YP_001230237.1| cytidylate kinase [Geobacter uraniireducens Rf4] gi|146397031|gb|ABQ25664.1| cytidylate kinase [Geobacter uraniireducens Rf4] Length = 240 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 +GL ++ +G GAGK+T LL L Sbjct: 10 KNGLIVAIDGPSGAGKSTITKLLAERL 36 >gi|260767577|ref|ZP_05876513.1| signal recognition particle receptor protein FtsY [Vibrio furnissii CIP 102972] gi|260617477|gb|EEX42660.1| signal recognition particle receptor protein FtsY [Vibrio furnissii CIP 102972] Length = 405 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 208 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQIWGERNNVPVIAQH-- 263 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 264 TGADSASVIYDAIEAAKARGVDVVIAD 290 >gi|158333400|ref|YP_001514572.1| WD repeat-containing protein [Acaryochloris marina MBIC11017] gi|158303641|gb|ABW25258.1| WD-repeat protein [Acaryochloris marina MBIC11017] Length = 1191 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 6/92 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I+ G+ G GKT+ L + LQ + YD + R PA E+ LLS + Sbjct: 129 RLITILGMGGVGKTSLAVKLAQELQDQ-YDTVIFRSLRNAPAVES----LLSQLIQVLSH 183 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 E VF + D + +++ +L+ D Sbjct: 184 HQETRVFESI-ADLLSRLVQHLQERRCLLILD 214 >gi|4504221|ref|NP_000849.1| guanylate kinase isoform b [Homo sapiens] gi|226874833|ref|NP_001152863.1| guanylate kinase isoform b [Homo sapiens] gi|2497498|sp|Q16774|KGUA_HUMAN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|1196436|gb|AAC37598.1| guanylate kinase [Homo sapiens] gi|1513315|gb|AAC50659.1| guanylate kinase [Homo sapiens] gi|13623297|gb|AAH06249.1| Guanylate kinase 1 [Homo sapiens] gi|14602820|gb|AAH09914.1| Guanylate kinase 1 [Homo sapiens] gi|48145789|emb|CAG33117.1| GUK1 [Homo sapiens] gi|49456965|emb|CAG46803.1| GUK1 [Homo sapiens] gi|55959196|emb|CAI15066.1| guanylate kinase 1 [Homo sapiens] gi|60551637|gb|AAH91480.1| GUK1 protein [Homo sapiens] gi|119590257|gb|EAW69851.1| guanylate kinase 1, isoform CRA_a [Homo sapiens] gi|119590264|gb|EAW69858.1| guanylate kinase 1, isoform CRA_a [Homo sapiens] Length = 197 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 47/226 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 1 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 44 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G + R + I A G + + S A Q + ++ Sbjct: 45 -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 99 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 155 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +P +V S + + E ++K Sbjct: 156 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 191 >gi|302872129|ref|YP_003840765.1| guanylate kinase [Caldicellulosiruptor obsidiansis OB47] gi|302574988|gb|ADL42779.1| guanylate kinase [Caldicellulosiruptor obsidiansis OB47] Length = 199 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 73/227 (32%), Gaps = 50/227 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M +GL I G G GK T + L + TR+P + Sbjct: 1 MRNGLLIVISGPAGTGKGTVVGKLLEKNPNIKLSISKTTRKPRPGEKEGMNYFFVSREQF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + +A ++ ++ + L +G ++ L Sbjct: 61 EEEIKNERFLEYAEYNNNYYGTPKDFVFETLEKGFDVI--------------------LE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +++ + +++V D +I LP + KR+ R + E E Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLVKRGTESEDEIKARLE----------- 149 Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215 IA+N+ P+ +++ + I I+ E ++ R Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDATEKIQKIIEVEKLKSR 189 >gi|237710836|ref|ZP_04541317.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|317474069|ref|ZP_07933348.1| hypothetical protein HMPREF1016_00327 [Bacteroides eggerthii 1_2_48FAA] gi|229455558|gb|EEO61279.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|316909911|gb|EFV31586.1| hypothetical protein HMPREF1016_00327 [Bacteroides eggerthii 1_2_48FAA] Length = 181 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 41/221 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I G G GKTT S++ + + VH+ + ++ A L + Sbjct: 1 MNQGRIIVITGSPGTGKTTIASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA + AA R G ++ D FL+ Sbjct: 60 QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + ++ C I+L + +KR R + LD + +V + E + F ++ Sbjct: 97 RALVREDYEVHC-IVLRASKEETMKRAVER------SKLDR--KTNVELVETMWEQFCNL 147 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220 + + ++D+ S ++ V E + R + LS Sbjct: 148 GIYESN---VIDTTTYSI----QETVSAVQEKIASRAALLS 181 >gi|254167582|ref|ZP_04874433.1| ArgK protein [Aciduliprofundum boonei T469] gi|197623391|gb|EDY35955.1| ArgK protein [Aciduliprofundum boonei T469] Length = 267 Score = 40.0 bits (93), Expect = 0.22, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 6/55 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----HVTREP--GGTPAAEAAR 51 G I F G G GK+T I + L V R P GG+ + R Sbjct: 46 KGRIICFTGPPGVGKSTLIDHVISILTEGGKKVGVILVDPRSPYTGGSLLGDRIR 100 >gi|326436687|gb|EGD82257.1| cytidylate kinase [Salpingoeca sp. ATCC 50818] Length = 228 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 46/156 (29%), Gaps = 35/156 (22%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCG 58 FI F G G+GK T + + + T + +P AE + ++ Sbjct: 43 FIVFVLGGPGSGKGTQCAKIAEEF---GFKHVSTGDLFRDEVKKDSPRAEKVKEIMKEGK 99 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + E + A ++ + + +L D F + Sbjct: 100 LIPTELTLEIL---ADAMESLVAASGSDIK----VLLDGF---------------PREIS 137 Query: 119 SLQEISVQEVMPDCTI--ILDLPVDIGLKRVQNRYS 152 + + + DC D+P ++ R R Sbjct: 138 QVHDFKKKFER-DCNFALYFDVPAEVMKDRCLKRGQ 172 >gi|323340395|ref|ZP_08080652.1| adenylate kinase [Lactobacillus ruminis ATCC 25644] gi|323092171|gb|EFZ34786.1| adenylate kinase [Lactobacillus ruminis ATCC 25644] Length = 219 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 73/250 (29%), Gaps = 89/250 (35%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T + + T + R + + G EA+ + Sbjct: 9 GLPGAGKGTQAEKIVDEYK---IPHIST--------GDIFRAAMKNG--TPMGLEAKKFI 55 Query: 71 FAAARLDHVEN-----VIRPALMEGKILLCDRFLDS----SYAYQGERDSSQHLFLDSLQ 121 + + V + +++ L + + D ++ + A D SL Sbjct: 56 ---DKGELVPDEVTNGIVKERLAKDD--VNDGYMLDGFPRNMAQAEALDEFGKELGKSLN 110 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------------DY 161 C I + + + ++R+ RY R+ ++ Sbjct: 111 ----------CVINIHVDPESLMERLTGRYICRDCGATYHKVFNPTKVEGTCDRCGGHEF 160 Query: 162 FERKD--------------------VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA 201 F+R+D + ++K Q L H V+ V Sbjct: 161 FQREDDKPETVKNRLDVNIKMNTPLLDFYKK--QGLL----------HEVNGNQDIDKVF 208 Query: 202 TNILNIVWEL 211 +I I+ ++ Sbjct: 209 ADIKEILDQI 218 >gi|17567503|ref|NP_509884.1| hypothetical protein F38B2.4 [Caenorhabditis elegans] gi|20455034|sp|Q20140|KAD1_CAEEL RecName: Full=Probable adenylate kinase isoenzyme F38B2.4; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|12276048|gb|AAG50236.1|AF304123_1 adenylate kinase 1 [Caenorhabditis elegans] gi|3876832|emb|CAA90364.1| C. elegans protein F38B2.4a, confirmed by transcript evidence [Caenorhabditis elegans] Length = 210 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 30/219 (13%), Positives = 64/219 (29%), Gaps = 41/219 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI G G+GK T + + + R + S + Sbjct: 23 FFIV--GGPGSGKGTQCD-----------KIVAKYGLTHLSSGDLLRDEVKSGSPRGAQL 69 Query: 63 GAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E A+V LD V+ + A+ +G FL Y + + + Sbjct: 70 TAIMESGALVPLEVVLDLVKEAMLKAIEKG----SKGFLIDGYPREVAQGQQFESEIQEA 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQ 175 + + D+ + +KR+ +R S R D +++ Sbjct: 126 K----------LVLFFDVAEETLVKRLLHRAQTSGRADDNADTIKKRLHTFVTSTAPVVD 175 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +++ S + ++ + + K Sbjct: 176 YY-----ESKGKLVRINAEGSVDDIFAVVVANLDKATSK 209 >gi|14590947|ref|NP_143021.1| adenylate kinase [Pyrococcus horikoshii OT3] gi|9972408|sp|O58844|KAD_PYRHO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|3257533|dbj|BAA30216.1| 220aa long hypothetical adenylate kinase [Pyrococcus horikoshii OT3] Length = 220 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 65/226 (28%), Gaps = 50/226 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK+T + + + R + G E E + Sbjct: 7 GPPGSGKSTQARRITER-----------YGLTYISSGDIIRAEI--SSRTPLGLEMEKYL 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 +R D + + I +++ R + ++ G + + + + Sbjct: 54 ---SRGDLIPDTIV-----NTLIISKLRRVRENFIMDGYPRT-PEQVIALENYLYDHGIK 104 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFERKDV--M 168 D I + + + ++R+ R + + D +R D Sbjct: 105 IDVAIDIFITKEESVRRISGRRICSKCGAVYHIEFNPPKIPGKCDICGGDLIQRPDDRPE 164 Query: 169 IHEKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208 I EKR I++ + +D S V I ++ Sbjct: 165 IVEKRYDIYMRNMEPIIKFYQKQGIYVKIDGHGSINEVWERIRPLL 210 >gi|71667254|ref|XP_820578.1| adenylate kinase [Trypanosoma cruzi strain CL Brener] gi|70885928|gb|EAN98727.1| adenylate kinase, putative [Trypanosoma cruzi] Length = 260 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 57/233 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T + V + + R + E G A Sbjct: 52 IVIAGPPGSGKGTQCQAIVERF-----GVVHIS------SGDLLRAEV--AAGTEVGKMA 98 Query: 67 EAIVFAAARL--DHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + + V N +R L + + L D F S D Sbjct: 99 ETFIHNGEMVPNKIVINAVRKRLEQDDVKERGWLLDGFPRS---------------RDQA 143 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------DYFER 164 + + ++P ++L++P I ++R++NR + + + + + Sbjct: 144 EALESSGIVPHVFLLLEVPDTIVVERIENRRTDPATGMVYHLLYNPPPPEDVALCERLIQ 203 Query: 165 KDVMIHEKRRQ---IFLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWE 210 +D E I+ + + ++ S +V +L +V Sbjct: 204 RDDDHRETVEARLRIYHEKLHGLKEHYGTLVETINGDQSIHAVTEGVLAVVER 256 >gi|319940527|ref|ZP_08014871.1| hypothetical protein HMPREF9464_00090 [Sutterella wadsworthensis 3_1_45B] gi|319806055|gb|EFW02809.1| hypothetical protein HMPREF9464_00090 [Sutterella wadsworthensis 3_1_45B] Length = 570 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 28/134 (20%) Query: 11 GIEGAGKTTHISLL-------KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G G GK+T + +L + L + + ++P P E + + Sbjct: 397 GPSGIGKSTLLKVLSGFAGNYEGKLSERGSIFWMPQQP-YLPKGELIAALTYPQSPETIT 455 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +A + +AA LDH++ + G A + + L +L Sbjct: 456 EQAAQELLSAAHLDHLKEKL---YDSGDW----------SALLSGGEQQRLSLLRAL--- 499 Query: 124 SVQEVMPDCTIILD 137 V PD ++LD Sbjct: 500 ---IVKPDI-LLLD 509 >gi|218440642|ref|YP_002378971.1| adenylate kinase [Cyanothece sp. PCC 7424] gi|218173370|gb|ACK72103.1| adenylate kinase [Cyanothece sp. PCC 7424] Length = 187 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 76/216 (35%), Gaps = 39/216 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55 M + + F G G+GK T +L + LQ T + R + L Sbjct: 1 MTKPIGLIFLGPPGSGKGTQAQVLSQSLQ---IPHIST--------GDILRQAITDSTPL 49 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + + E + + +P +G +L D F R +Q Sbjct: 50 GIKAQSYMDKGELVPDDLLLDLIKNRLSQPDAQQG-WIL-DGF---------PRTVAQAC 98 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK--- 172 FL++L ++ ++ +C + L++P D+ ++R+ R + R+ + HE+ Sbjct: 99 FLENL--LAQLDLFSECVVNLEVPEDVLIERLLGRGRQDDHETTIR--RRLQVYHEQTAP 154 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + ++ + V+ ++ I+ Sbjct: 155 VIDYYRQRGNLNS-----LNGNRPPEQVSHSLKEII 185 >gi|169335418|ref|ZP_02862611.1| hypothetical protein ANASTE_01830 [Anaerofustis stercorihominis DSM 17244] gi|169258156|gb|EDS72122.1| hypothetical protein ANASTE_01830 [Anaerofustis stercorihominis DSM 17244] Length = 182 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 25/176 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G G G+GK+T L++ + + T P E + LS + Sbjct: 2 RGKLFVISGPSGSGKSTICKELEKE-ENIKISISATTRPMRKGEEEGVNYYFLSNEEFQK 60 Query: 63 GAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + +A A+ +H ++ + L G ++ + +D A Q +R + + + + Sbjct: 61 RIKKKAFYEFASVFNHYYGTLKEKVDEMLDGGYNVILE--IDVQGAMQIKRQNDKAILI- 117 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF--ERKDVMIHEK 172 +MP + ++R+ NR + + +++++ K Sbjct: 118 --------FIMPP-------SEEELIERLTNRKTESDEQLKLRIATAKEEILFKNK 158 >gi|50745115|ref|XP_419990.1| PREDICTED: similar to XPA binding protein 1 [Gallus gallus] Length = 369 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 18 GMAGSGKTTFVQCLAAHLHGQRCPPYVINLDPAVHELPFPANIDIRDTVKYKEVMKQYGL 77 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I K ++ D Sbjct: 78 GPNGGIVTSLNLFATRFDQVMKFIEKRQNASKYVIID 114 >gi|163937882|ref|YP_001642768.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4] gi|163865737|gb|ABY46793.1| deoxynucleoside kinase [Bacillus weihenstephanensis KBAB4] Length = 215 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 47/160 (29%), Gaps = 23/160 (14%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 +G+ G GKTT +L++ L D+ + E G +G + Sbjct: 9 VIDGVVGCGKTTLAKILEKEL-----DMPLYEEIGSQDTINLLDRFY--AKRTRWGFTLQ 61 Query: 68 AIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFLDS--- 119 I+ G + + DR A E + + Sbjct: 62 IHFLNTRFRQ-----IKDIHANGGGMLDRSIFGDRLFAEMMAEDLEDGGEGMTWEEFRTY 116 Query: 120 ---LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 L + + P + L+ VD + R+ R ES Sbjct: 117 STLLDSMLEHSIPPTLLVYLECDVDTAIGRISKRDRGLES 156 >gi|229527114|ref|ZP_04416508.1| signal recognition particle receptor protein FtsY [Vibrio cholerae 12129(1)] gi|229335345|gb|EEO00828.1| signal recognition particle receptor protein FtsY [Vibrio cholerae 12129(1)] Length = 344 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 200 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 256 TGADSASVIYDAIEAAKARGIDVVIAD 282 >gi|238021574|ref|ZP_04602000.1| hypothetical protein GCWU000324_01474 [Kingella oralis ATCC 51147] gi|237866188|gb|EEP67230.1| hypothetical protein GCWU000324_01474 [Kingella oralis ATCC 51147] Length = 542 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 GI GAGKTT I L ++ Q + V + G AAR L G Sbjct: 349 GINGAGKTTSIGKLAKYFQAQGKSVILA---AGDTFRAAAREQLQEWGE 394 >gi|169642562|gb|AAI60767.1| Deoxyribonucleoside kinase-like [Xenopus laevis] Length = 278 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 36/214 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63 I EG +GKT+ + L+ V R G P + Sbjct: 73 ICVEGNIASGKTSCLDYFSNTPDLEVFKEPVAKWRNVCGHNPLGL----MYQDPNKWGLT 128 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY------AYQ-GERDSSQHLF 116 + + H + I P + + +R + S+ YQ G+ + + Sbjct: 129 LQTYVQLTMLD--IHTKPSISP------VKMMERSIYSAKYIFVENLYQSGKMPAVDYAI 180 Query: 117 L-DSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L + + I + D + L +I +R++ R ES + Sbjct: 181 LTEWFKWIVKNTDTSVDLIVYLQTSPEICYQRLKKRCREEESVIP-------LEYLCAIH 233 Query: 175 QIFLD-IARNQ----PDRCHIVDSAHSFQSVATN 203 ++ D + + P ++D + + + Sbjct: 234 NLYEDWLVKQTSFSVPAPVLVIDGNKELEELTQH 267 >gi|147901640|ref|NP_001082184.1| thymidine kinase 2, mitochondrial [Xenopus laevis] gi|18026944|gb|AAL55705.1|AF250861_1 putative deoxyribonucleoside kinase [Xenopus laevis] Length = 278 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 65/214 (30%), Gaps = 36/214 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRF--LQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFG 63 I EG +GKT+ + L+ V R G P + Sbjct: 73 ICVEGNIASGKTSCLDYFSNTPDLEVFKEPVAKWRNVCGHNPLGL----MYQDPNKWGLT 128 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY------AYQ-GERDSSQHLF 116 + + H + I P + + +R + S+ YQ G+ + + Sbjct: 129 LQTYVQLTMLD--IHTKPSISP------VKMMERSIYSAKYIFVENLYQSGKMPAVDYAI 180 Query: 117 L-DSLQEISVQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L + + I + D + L +I +R++ R ES + Sbjct: 181 LTEWFKWIVKNTDTSVDLIVYLQTSPEICYQRLKKRCREEESVIP-------LEYLCAIH 233 Query: 175 QIFLD-IARNQ----PDRCHIVDSAHSFQSVATN 203 ++ D + + P ++D + + + Sbjct: 234 NLYEDWLVKQTSFSVPAPVLVIDGNKELEELTQH 267 >gi|67528044|ref|XP_661862.1| hypothetical protein AN4258.2 [Aspergillus nidulans FGSC A4] gi|40739736|gb|EAA58926.1| hypothetical protein AN4258.2 [Aspergillus nidulans FGSC A4] gi|259481128|tpe|CBF74375.1| TPA: uridylate kinase Ura6 (AFU_orthologue; AFUA_7G03990) [Aspergillus nidulans FGSC A4] Length = 215 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 53/216 (24%) Query: 11 GIEGAGKTTHISLLK-----------RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G G+GK T + L L+ + + ++ + + Sbjct: 22 GGPGSGKGTQSANLVRDYGFVHLSAGDLLRAEQIR-------PESEYGALIKNYITEGKI 74 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A++ A + N + A + RFL G Sbjct: 75 VPM-EITVALLSNAMAAELDANKDKYASAKP------RFLID-----GFPRKLDQAVF-- 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 +E + T+ LD P ++ KR+ R +D E R+ F Sbjct: 121 FEETVCPS---EFTLFLDCPEEVMEKRLLKRGETSG---------RDDDNAESIRKRFRT 168 Query: 180 IAR---------NQPDRCHIVDSAHSFQSVATNILN 206 + D+ V + + + V I Sbjct: 169 FVETSMPVVTEFEKQDKVISVAATGTVEEVYERIQA 204 >gi|260771642|ref|ZP_05880562.1| signal recognition particle receptor protein FtsY [Vibrio metschnikovii CIP 69.14] gi|260613419|gb|EEX38618.1| signal recognition particle receptor protein FtsY [Vibrio metschnikovii CIP 69.14] Length = 388 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 191 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNHVPVIAQH-- 246 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 247 TGADSASVIYDAIEAAKARGIDVVIAD 273 >gi|256390278|ref|YP_003111842.1| phosphotransferase (aminonucleoside antibiotic resistance) [Catenulispora acidiphila DSM 44928] gi|256356504|gb|ACU70001.1| phosphotransferase (aminonucleoside antibiotic resistance) [Catenulispora acidiphila DSM 44928] Length = 192 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 35/164 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FG 63 I GI +GK+T ++L + + V + R +++S VD Sbjct: 3 RLIVVTGIPASGKSTVAAVLAQRC-ARGVIV----------DGDTIRAMVVSGCVDMSRE 51 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AEA+ R V L G ++ D+ LD L Sbjct: 52 PSAEALWQLRLRYQASLAVAGVYLQAGFDVV-------------FNDNVLGPLLDEL--- 95 Query: 124 SVQEVMP----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 ++P + L+ ++ R + R +A F+ Sbjct: 96 --PGLVPCDRFHLVV-LNPSPEVIRDRDRQRAKTAYTAENGKFD 136 >gi|290893964|ref|ZP_06556940.1| dephospho-CoA kinase [Listeria monocytogenes FSL J2-071] gi|290556502|gb|EFD90040.1| dephospho-CoA kinase [Listeria monocytogenes FSL J2-071] Length = 200 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 77/216 (35%), Gaps = 32/216 (14%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60 G+ G+ GK+T +++++ L + EPG E +LL+ G Sbjct: 6 GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVEPGTEGLKEIVAYFGEEILLADGTL 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I + + + + P + + + +RF + + LF L Sbjct: 66 NRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFRAGE--ELVFFDIPLLFESHL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179 + + Q V + + LKR+ R +L + L E + + I EK R+ F Sbjct: 124 ESLVDQIV----VVW--TTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++D+ S + + + V+ + Sbjct: 175 ----------VIDNNESLEKTQKQVYTFIERFVKNK 200 >gi|3184188|dbj|BAA28693.1| UMP-CMP kinase [Lentinula edodes] Length = 227 Score = 40.0 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 68/218 (31%), Gaps = 43/218 (19%) Query: 11 GIEGAGKTTHISLLKR-----------FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 G GAGK T + L L+ + + RE G+ + + + + Sbjct: 32 GGPGAGKGTQCARLVEDFSFSHLSAGDLLRAEQH-----RE--GSEYGQLIQTCIKEGSI 84 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ A E +G+ RFL + +D Sbjct: 85 VPM-EVTVKLLENAMTATLAERRSGEGWTDGQG----RFLIDGF----------PRKMDQ 129 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RR 174 ++ + ++ L R+ R S RE ++ +++ E+ Sbjct: 130 AEKFEHDVGKATAVLFFSTTQEVMLDRLLERGKTSGREDDNVESIKKRFNTYKEQTMPVI 189 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + + + +DS+ S + V + V +L+ Sbjct: 190 EHYEKL-----GKVIEIDSSVSIEEVHQKTRSAVAKLL 222 >gi|298369773|ref|ZP_06981090.1| signal recognition particle-docking protein FtsY [Neisseria sp. oral taxon 014 str. F0314] gi|298282330|gb|EFI23818.1| signal recognition particle-docking protein FtsY [Neisseria sp. oral taxon 014 str. F0314] Length = 410 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 217 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 271 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 272 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 322 Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159 MPD ++LD +IG V + E+ L Sbjct: 323 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 356 >gi|294054376|ref|YP_003548034.1| adenylylsulfate kinase [Coraliomargarita akajimensis DSM 45221] gi|293613709|gb|ADE53864.1| adenylylsulfate kinase [Coraliomargarita akajimensis DSM 45221] Length = 205 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 68/206 (33%), Gaps = 40/206 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L+R L + VT+ +L G ++ Sbjct: 35 GLSGSGKSTLANALERKLVEQG---IVTK--------------ILDGDNIRSGLNSDLGF 77 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ-EVM 129 R +++ + A + FLDS + + +EI + Sbjct: 78 SDEDRKENIRRIAEVARL---------FLDSGVVVFTSFITPKRELRQQAREIVGDVDFT 128 Query: 130 PDCTIILDLPVDIGLKR-VQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 P + ++ + +R V+ Y+ + + +F KD A D Sbjct: 129 P---VYVEASFETCAERDVKGLYAKAAAGGVKHFTGKDSSF--------EAPAEGDTDWV 177 Query: 189 HIVDSAHSFQSVATNILNIVWELVQK 214 D + + +L V L+++ Sbjct: 178 IHTD-NQTEEESLNQLLEQVLPLIRQ 202 >gi|225551732|ref|ZP_03772675.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia sp. SV1] gi|225371527|gb|EEH00954.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia sp. SV1] Length = 347 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 FI+ G G GKTT I +L FL +KN +++ Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLNQKNGEIYFFS 68 >gi|171915234|ref|ZP_02930704.1| guanylate kinase [Verrucomicrobium spinosum DSM 4136] Length = 205 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 27/198 (13%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ + G G+GKTT + + + TR+P +E Sbjct: 13 GVLLIVSGPSGSGKTTLCRQIADLGEAVHSVSATTRKPRPGEMHGKDYFFFSEEEFEEKI 72 Query: 64 AEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E A + ++ ++ L G ++ D D + + Sbjct: 73 ARGEFFEHARVHGNLYGTLKTYVKENLERGVDVVMD------------IDVQGATLVRAC 120 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + VQ+ + D IL VD +R+ R + + + + + + R +I Sbjct: 121 DDELVQQCLAD-VFILPASVDALKERLAGRGTEDD---------ESLEL--RLRNALTEI 168 Query: 181 ARNQPDRCHIVDSAHSFQ 198 A R +V + Sbjct: 169 AHWHKYRYALVSGSREAD 186 >gi|134287211|ref|YP_001110907.1| thymidine kinase [Heliothis virescens ascovirus 3e] gi|133722119|gb|ABO37241.1| thymidine kinase [Heliothis virescens ascovirus 3e] Length = 217 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 62/219 (28%), Gaps = 33/219 (15%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++S EG G+GK++ + + + + EP LL Sbjct: 12 YVSVEGNIGSGKSSVMRSVAKHFDD---CILFCEEPVNDWG-------LL--EYMYRDPT 59 Query: 66 AEAIVFAAARLDHVENVIRPALME-----GKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A F L + AL E +I++ +R S+Y + Sbjct: 60 KYAFAFEVQVLTSKYHKWINALDECRRTQKRIVVMERSPLSAYKVFTRMMRERGTISSHQ 119 Query: 121 QEISVQ---EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 I Q E P D + +D R R E E + Sbjct: 120 YHIYTQIFAEFQPQLKSIDHIVHIDTRASTCQVRAGERNRKAE-------EALSLEYLLD 172 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + + + +D S + VA + + L Sbjct: 173 V-ESYTNNYVRDHSSVYTIDGDRSREHVAGELTAFLSSL 210 >gi|67923512|ref|ZP_00516987.1| Carbohydrate kinase, thermoresistant glucokinase [Crocosphaera watsonii WH 8501] gi|67854654|gb|EAM49938.1| Carbohydrate kinase, thermoresistant glucokinase [Crocosphaera watsonii WH 8501] Length = 169 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 52/214 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT L + YD P + ++ + L+ A +V Sbjct: 7 GVSGSGKTTIGQALSQEFGCAFYDADDFHPPEN--ITKMSQGIPLNDSDRLPWLNAIKLV 64 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 H E + ++ C + + + D L+E + + Sbjct: 65 IN----QHQEE------NKNAVITC--------------SALKQSYRDLLEENTTDIIW- 99 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L + L R+Q R +F +++++I + F + +P+ I Sbjct: 100 ---IYLKGNHETILNRLQQRSK--------HFMKENMLISQ-----FKTL--EEPENAVI 141 Query: 191 VDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 +D S + + I +++ + + S KD Sbjct: 142 IDVNLSVKEILQEI-------IEQTYAKIESNKD 168 >gi|325286564|ref|YP_004262354.1| Guanylate kinase [Cellulophaga lytica DSM 7489] gi|324322018|gb|ADY29483.1| Guanylate kinase [Cellulophaga lytica DSM 7489] Length = 197 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 36/103 (34%), Gaps = 8/103 (7%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREP--GGTPAAEAARHVLLS 56 M G I F G+GKTT + L K+ L + V T P G E + LS Sbjct: 1 MKGGKLIIFSAPSGSGKTTIVRHLLGKKHLNLA-FSVSATSRPKRGKEKNGEHYYFLSLS 59 Query: 57 ---CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + V+ ++ + EGK ++ D Sbjct: 60 EFKNHIKNDDFLEWEEVYRDNFYGTLKTEVERLWAEGKNVIFD 102 >gi|225011856|ref|ZP_03702294.1| conserved hypothetical protein [Flavobacteria bacterium MS024-2A] gi|225004359|gb|EEG42331.1| conserved hypothetical protein [Flavobacteria bacterium MS024-2A] Length = 184 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 41/133 (30%), Gaps = 18/133 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGKT+ I + L Y+V E E + Sbjct: 6 IVISGSPGAGKTSVIEV----LSANGYNV---FEEFSRTIIEEGKA--KGKANFFLSDPH 56 Query: 67 EAI--VFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +F R + E + K + DR + +YAY + + +E+ Sbjct: 57 EFSERLFL-GRKEQFETANTLKVEPTKPYVFFDRGIHDTYAYLNALGEASTYW----EEL 111 Query: 124 SVQEVMPDCTIIL 136 D +L Sbjct: 112 V-GAFKYDLVFLL 123 >gi|167461882|ref|ZP_02326971.1| ABC-type MDR transport system, ATPase component [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383307|ref|ZP_08057107.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152427|gb|EFX45226.1| ABC transporter-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 315 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 70/219 (31%), Gaps = 34/219 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--- 59 G + F G GAGKTT I++L L +H EP + R + + Sbjct: 32 QGEILCFLGPNGAGKTTTINILSTTLHGDQGKIHYCGEPVNRHTSRYKRELGIIPQDLAV 91 Query: 60 -DEFGAEAEAIVFAAARLDHVENVIRPALMEGK------ILLCDRFLDSSYAYQGERDSS 112 ++ AEA FA+ + + L +G + L DR D + G Sbjct: 92 YEDISAEANVRFFAS-----LYGLKGKELEQGTNDALEFVGLADRRKDKPKTFSGGMK-- 144 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L P II+D +G + + + + I Sbjct: 145 -----RRLNMACAIAHRPKL-IIMD-EPTVG---IDPQSRNHILGSIRRLRDEGATIIYT 194 Query: 173 RRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILN 206 +++ R I+D ++ + + + + + Sbjct: 195 TH--YMEEVEEISTRILIIDHGEVIASGTKEELKERLAD 231 >gi|91227501|ref|ZP_01261838.1| cell division protein FtsY [Vibrio alginolyticus 12G01] gi|91188525|gb|EAS74817.1| cell division protein FtsY [Vibrio alginolyticus 12G01] Length = 403 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 203 GVNGVGKTTTIGKLAKQFQTQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 258 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A + + I A G +++ D R ++ ++ L++I Sbjct: 259 TGADSASVIYDAIEAAKARGVDVVIAD---------TAGRLQNKANLMEELRKIV 304 >gi|319783341|ref|YP_004142817.1| adenylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169229|gb|ADV12767.1| adenylate kinase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 198 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 67/217 (30%), Gaps = 41/217 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA---- 66 G GAGK T L + T + R + + A+A Sbjct: 7 GPPGAGKGTQAQRLVE---KHGIPQLST--------GDMLRAAVQAGTEVGKRAKAVMDA 55 Query: 67 -EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E + A E + +P +G + D + R Q ++ + Sbjct: 56 GELVSDAIVNAIVAERIDQPDCAKGF--ILDGY---------PRTLVQADAVEQMLSDRS 104 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD-YFERKDVMIHEKRRQIFLD----- 179 Q + D I L + + R+ R ++A L + + E+ R+ + Sbjct: 105 QGL--DAVIELVVDDKALVGRIVKRADEAQAAGLPVRKDDNPTVFEERLREYYKKTSPLI 162 Query: 180 ---IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 A+ + VD +V I ++ + V+ Sbjct: 163 GYYYAK---GKLRSVDGMADIDAVTEQIEAVLKDAVR 196 >gi|304440684|ref|ZP_07400568.1| guanylate kinase [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370871|gb|EFM24493.1| guanylate kinase [Peptoniphilus duerdenii ATCC BAA-1640] Length = 210 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 56/177 (31%), Gaps = 28/177 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G + G G+GK T + L + + + TR P + Sbjct: 1 MSKGFLMVLSGPSGSGKGTVSAALMKKNKEIVFSTSVTTRTPRPGEVNGENYFFVSVDEF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + +A ++ + + + +G+I+L + +D A Q ++ + Sbjct: 61 ENMVQNDGLLEYAFVHTNYYGTPKEFVFNEIEKGEIVLLE--IDVQGALQIKKRYKEA-- 116 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER--KDVMI 169 I LP +R+ NR + E F K++ Sbjct: 117 ----------------VFIFLLPPSMSELKQRLINRDTETEEEINTRFSNAYKELDF 157 >gi|296224230|ref|XP_002757971.1| PREDICTED: GPN-loop GTPase 1-like [Callithrix jacchus] Length = 423 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L + VH P + + V+ G+ Sbjct: 75 GMAGSGKTTFVQRLTGHLHTEGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 134 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A K +L D Sbjct: 135 GPNGGIVTSLNLFATRFDQVMQFIEKAQNVSKYVLID 171 >gi|288556071|ref|YP_003428006.1| cytidylate kinase [Bacillus pseudofirmus OF4] gi|288547231|gb|ADC51114.1| cytidylate kinase [Bacillus pseudofirmus OF4] Length = 224 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34 MN+ + I+ +G GAGK+T L+ L D Sbjct: 1 MNNLMNIAIDGPAGAGKSTVAKLVAERLSYLYID 34 >gi|258515532|ref|YP_003191754.1| guanylate kinase [Desulfotomaculum acetoxidans DSM 771] gi|257779237|gb|ACV63131.1| guanylate kinase [Desulfotomaculum acetoxidans DSM 771] Length = 198 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 28/168 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL + G GAGK T L + Q V TR+P + + + E Sbjct: 4 KGLLLVISGPSGAGKGTVCQALLKKKQNMYLSVSATTRQPRSGEI-QGVNYWFKTKEEFE 62 Query: 62 FGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + + A D+ + AL GK ++ + +D A Q Sbjct: 63 HLLVEDQFLEYARVYDNYYGTPRLEVEKALETGKDVILE--IDIQGALQ----------- 109 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 V+E MP+ ++ +P L ++ R R + E++ Sbjct: 110 -------VKEKMPNSVLVFIVPP--SLTELKTRLVNRGTDSAAEIEKR 148 >gi|227511562|ref|ZP_03941611.1| multidrug ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus buchneri ATCC 11577] gi|227523761|ref|ZP_03953810.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus hilgardii ATCC 8290] gi|227085207|gb|EEI20519.1| multidrug ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus buchneri ATCC 11577] gi|227089076|gb|EEI24388.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus hilgardii ATCC 8290] Length = 295 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G GAGKTT ++L++ L N+ + + +PG T E + E I Sbjct: 37 GPNGAGKTTLLNLIQGILSSHNHAITVLDSQPGSTIVKEKVATMFQDDLQINNVKVNEFI 96 Query: 70 VFAAARLDHVEN 81 AA+ H +N Sbjct: 97 KLFAAQATHPKN 108 >gi|55959197|emb|CAI15067.1| guanylate kinase 1 [Homo sapiens] Length = 199 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 36/221 (16%), Positives = 71/221 (32%), Gaps = 35/221 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ + G GAGK+T LLKR LQ G + +R ++ + Sbjct: 1 MSGPRPVVLSGPSGAGKST---LLKRLLQEH-------SGIFGFSVSRESRALVEGYHEE 50 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS- 119 E R + I A G + + S A Q + ++ LD Sbjct: 51 PEARRGERQREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRICVLDVD 105 Query: 120 ---LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 ++ I ++ P I + + + +R++ R + E + + + Sbjct: 106 LQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQADME--- 159 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +P +V S + + E ++K Sbjct: 160 -------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 193 >gi|124027273|ref|YP_001012593.1| ABC transporter ATP-binding protein [Hyperthermus butylicus DSM 5456] gi|123977967|gb|ABM80248.1| ABC (ATP-binding cassette) transporter domain [Hyperthermus butylicus DSM 5456] Length = 230 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 19/34 (55%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F+ G G+GKTT + ++ L+ +V++ Sbjct: 31 GKFVVIVGPNGSGKTTLLKIIVGLLEPAKGEVYI 64 >gi|118593263|ref|ZP_01550648.1| ABC transporter related protein [Stappia aggregata IAM 12614] gi|118434154|gb|EAV40810.1| ABC transporter related protein [Stappia aggregata IAM 12614] Length = 280 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 2/77 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHV-LLSCGVDE 61 G I+F G G+GK+T + +++ + V R G + AR V +LS D Sbjct: 31 GRIIAFCGPNGSGKSTALKVMRGLHRPDGGTVEIAGRMLGDWTQKDLARQVAMLSQSPDA 90 Query: 62 FGAEAEAIVFAAARLDH 78 + + R H Sbjct: 91 PSDLSVGDLVLMGRFAH 107 >gi|56693115|ref|YP_164702.1| hypothetical protein LP65_gp067 [Lactobacillus phage LP65] gi|54633616|gb|AAV35887.1| orf67 [Lactobacillus phage LP65] Length = 246 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 60/242 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G+ G+GK+T +LL L +V+ L + Sbjct: 1 MVITLSGVIGSGKSTLATLLGDQL---GTNVYYESVEDNPML------PLFYKDPQRYSF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY------QGERDSSQHLF 116 E + F + RLD I AL E +L DR + DS + + + Sbjct: 52 ELQIY-FLSKRLDS----IMSALEENNSVL-DRSIYEDSLFFHTNAKLGRVAGGVEDSKV 105 Query: 117 L----DSLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 L D L E ++++ PD I + + + + R+ R E D Sbjct: 106 LVNIYDDLLEHMLRKIHGMPKMAPDLMIGIHVSYETMVNRISKRGRPYEQVQND------ 159 Query: 167 VMIHEKRRQIFLDIARNQPD---------RCHIVDSAH--------SFQSVATNILNIVW 209 + + ++ + +++D + V +IL+ + Sbjct: 160 ----AGLKSYYKELLKAYDKFFNGGYNESPIYVIDGDKYDFVGNKHDREIVMGDILDTLE 215 Query: 210 EL 211 L Sbjct: 216 SL 217 >gi|312880744|ref|ZP_07740544.1| protein of unknown function DUF344 [Aminomonas paucivorans DSM 12260] gi|310784035|gb|EFQ24433.1| protein of unknown function DUF344 [Aminomonas paucivorans DSM 12260] Length = 492 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 ++FEG + AGK I L + L + Y V T P A Sbjct: 298 VAFEGPDAAGKGGCIKRLTQELDPRGYQVVPTSAPNDWERA 338 Score = 36.5 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 19/36 (52%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 + FEG +GAGK T ++ L L + + VH P Sbjct: 43 VVFEGWDGAGKGTLMNELILALDPRGFQVHNVGGPT 78 >gi|289597034|ref|YP_003483730.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469] gi|289534821|gb|ADD09168.1| LAO/AO transport system ATPase [Aciduliprofundum boonei T469] Length = 316 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 20/55 (36%), Gaps = 6/55 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV----HVTREP--GGTPAAEAAR 51 G I F G G GK+T I + L V R P GG+ + R Sbjct: 46 KGRIICFTGPPGVGKSTLIDHVISILTEGGKKVGVILVDPRSPYTGGSLLGDRIR 100 >gi|255065474|ref|ZP_05317329.1| signal recognition particle-docking protein FtsY [Neisseria sicca ATCC 29256] gi|255050299|gb|EET45763.1| signal recognition particle-docking protein FtsY [Neisseria sicca ATCC 29256] Length = 480 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 287 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 341 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 342 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 392 Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159 MPD ++LD +IG V + E+ L Sbjct: 393 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 426 >gi|2773023|gb|AAC08906.1| regulatory protein PilA [Neisseria meningitidis] Length = 144 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q V + G AAR L + G E Sbjct: 22 GINGAGKTTSIGKLAKYFQAHGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 76 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 77 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 127 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 128 AMPDAPHEIIVVLD 141 >gi|33303843|gb|AAQ02435.1| guanylate kinase 1 [synthetic construct] gi|54696768|gb|AAV38756.1| guanylate kinase 1 [synthetic construct] gi|54696770|gb|AAV38757.1| guanylate kinase 1 [synthetic construct] gi|61366518|gb|AAX42870.1| guanylate kinase 1 [synthetic construct] gi|61366526|gb|AAX42871.1| guanylate kinase 1 [synthetic construct] Length = 198 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 47/226 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 1 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 44 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G + R + I A G + + S A Q + ++ Sbjct: 45 -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 99 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 155 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +P +V S + + E ++K Sbjct: 156 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 191 >gi|323360052|ref|YP_004226448.1| peptide arylation enzyme [Microbacterium testaceum StLB037] gi|323276423|dbj|BAJ76568.1| peptide arylation enzyme [Microbacterium testaceum StLB037] Length = 559 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 2/65 (3%) Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSF--QSVATNILNIVWELVQ 213 + D + + + F A P+R +V+ S V + L++ Sbjct: 12 TEVADRYRAEGLWQGRTLGDAFAAAASRHPERIALVNGDLSLTYAEVHDRVEACAARLIE 71 Query: 214 KRVSP 218 + ++P Sbjct: 72 RGLAP 76 >gi|294677384|ref|YP_003577999.1| guanylate kinase [Rhodobacter capsulatus SB 1003] gi|294476204|gb|ADE85592.1| guanylate kinase [Rhodobacter capsulatus SB 1003] Length = 214 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 38/106 (35%), Gaps = 18/106 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I GAGK+T L + ++ V TR P P E R Sbjct: 6 RRGLLIILSSPSGAGKSTLARRLMAWDASLSFSVSATTRNP--RPGEEDGREYYFRSR-- 61 Query: 61 EFGAEAEAIVFAAARLDHVE----------NVIRPALMEGKILLCD 96 E EA+V A L+H E + L EG+ ++ D Sbjct: 62 ---PEFEAMVAAGEMLEHAEVFGNLYGTPSAPVEARLAEGRDVILD 104 >gi|242277657|ref|YP_002989786.1| cytidylate kinase [Desulfovibrio salexigens DSM 2638] gi|259494035|sp|C6BVN3|KCY_DESAD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|242120551|gb|ACS78247.1| cytidylate kinase [Desulfovibrio salexigens DSM 2638] Length = 223 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 16/48 (33%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48 M++ I+ +G G GK+T L + D E Sbjct: 1 MDTPFIITLDGPAGVGKSTLAKRLADRFEIAYLDTGAMFRGTAWKLGE 48 >gi|121610088|ref|YP_997895.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gi|121554728|gb|ABM58877.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 266 Score = 40.0 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 38/198 (19%), Positives = 67/198 (33%), Gaps = 26/198 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---REPGGTPAAEAARHVLLSCGVDEF 62 FIS G G GK+T + L+ + +H + + P G + L F Sbjct: 42 FISLLGPSGCGKSTALRLMAGLARSSGGTMHWSGAEQTPSGRELGFVFQEPTLMPWAKVF 101 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + A R D V+R AL ++ RF D Y E + + + Sbjct: 102 DNVRLPLKLAGMRRDAAAPVVRQALE---MVGLSRFAD---VYPRELSGGMKMRVSIARA 155 Query: 123 ISVQEVMPDCTIILDLPVDIG--LKRVQNRYSLRESACLDYFERKDVMI--HEKRRQIFL 178 + P +++D P + R++ L F V+ H ++L Sbjct: 156 LVT---RPRL-LLMDEPFAALDEMTRIKLNNDLLAIWREHRF---SVVFVTHSVYESVYL 208 Query: 179 D----IARNQPDRCHIVD 192 + +P R ++D Sbjct: 209 SNRIVVMAARPGR--VID 224 >gi|326387140|ref|ZP_08208750.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Novosphingobium nitrogenifigens DSM 19370] gi|326208321|gb|EGD59128.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Novosphingobium nitrogenifigens DSM 19370] Length = 657 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 38/143 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +L+++ LL G + Sbjct: 488 FTGLSGSGKSTIANLVEKKFHALGKHTF-----------------LLDGDNVRHGLNKDL 530 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QEI 123 A R++++ V + G I++ A+ + + + L E Sbjct: 531 GFTEADRIENIRRVGEVAKLMTDAGLIVIT--------AFISPFRAEREMVRAMLPEGEF 582 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 + +D P++ +R Sbjct: 583 VE--------VFIDTPLEEAERR 597 >gi|317180388|dbj|BAJ58174.1| adenylate kinase [Helicobacter pylori F32] Length = 191 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + +I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKRIILIDGYPRSVEQMQALDKELGTQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V + + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKTINGERSIEEIVHEMQEYILSF 189 >gi|239993200|ref|ZP_04713724.1| adenylylsulfate kinase [Alteromonas macleodii ATCC 27126] Length = 198 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 52/148 (35%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T +LL++ L +N + LL G + Sbjct: 33 GLSGSGKSTLANLLEKKLHEQNKHTY-----------------LLDGDNVRHGLCGDLGF 75 Query: 71 FAAARLDHVE---NVIRPALMEGKILL--------CDR-FLDSSYAYQGERDSSQHLFLD 118 R++++ V + + G I+L DR + S F++ Sbjct: 76 SDKDRVENIRRISEVAKLFVDAGTIVLTAFISPFKADRDYCRSLM--------EDGEFVE 127 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 + +D P+++ KR Sbjct: 128 ---------------VFIDTPLEVCEKR 140 >gi|310658923|ref|YP_003936644.1| hypothetical protein CLOST_1619 [Clostridium sticklandii DSM 519] gi|308825701|emb|CBH21739.1| conserved protein of unknown function [Clostridium sticklandii] Length = 492 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 4/66 (6%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + FEG + +GK T I+ L + L + Y V V E E R L + + Sbjct: 42 LVIFEGWDASGKGTLINELIQELDPRGYKVEVFHESTE----EEKRKPFLWRFWQKIPRK 97 Query: 66 AEAIVF 71 E ++F Sbjct: 98 GEIMIF 103 >gi|195564678|ref|XP_002105941.1| GD16579 [Drosophila simulans] gi|194203306|gb|EDX16882.1| GD16579 [Drosophila simulans] Length = 299 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 11/90 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G+ +GK+T L+ + VH+ E P A ++ + Sbjct: 4 VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN-----SHTGDSQKE 58 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + R D R L + +++ D Sbjct: 59 KVV-----RSDLKSEASRH-LNQDDLVILD 82 >gi|195347775|ref|XP_002040427.1| GM19183 [Drosophila sechellia] gi|194121855|gb|EDW43898.1| GM19183 [Drosophila sechellia] Length = 299 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 11/90 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G+ +GK+T L+ + VH+ E P A ++ + Sbjct: 4 VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN-----SHTGDSQKE 58 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + R D R L + +++ D Sbjct: 59 KVV-----RSDLKSEASRH-LNQDDLVILD 82 >gi|111024091|ref|YP_707063.1| shikimate kinase [Rhodococcus jostii RHA1] gi|123045355|sp|Q0S0N1|AROK_RHOSR RecName: Full=Shikimate kinase; Short=SK gi|110823621|gb|ABG98905.1| shikimate kinase [Rhodococcus jostii RHA1] Length = 168 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 64/200 (32%), Gaps = 40/200 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK+T L + L +D V E A + + G F A E Sbjct: 9 GPPGAGKSTIGRRLAQALDLPLFDTDVAVE---EEAGRTIAEIFVQEGEPAFRALEE--- 62 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 ++R A+ + ++ G + L+ + Sbjct: 63 ----------EIVRKAIESHEGIVS----------LGGGSILSERTRELLKGHT------ 96 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L++ V GLKR + A D +K + KRR ++ +A R Sbjct: 97 --VIYLEISVAEGLKRTGTNTARPLLAGGDP-RQKYTELMRKRRPLYRQVASI---RIRT 150 Query: 191 VDSAHSFQSVATNILNIVWE 210 D S V ++ + E Sbjct: 151 -DG-RSPARVVQQLVAKLAE 168 >gi|15669754|ref|NP_248567.1| putative NTPase [Methanocaldococcus jannaschii DSM 2661] gi|1500452|gb|AAB99578.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 188 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 28/109 (25%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTRE--PGGTPAAEAARHVLLSCGVDE 61 FI+ G+ G GKTT + L+ Y V +T+E GG + L + Sbjct: 22 FIT--GMPGVGKTTLALKIAEKLKELGYKVGGFITKEIRDGGKRVGFKI--ITLDTNEET 77 Query: 62 FGAEAEAIVF----------AAARLDHVENV----IRPALMEGKILLCD 96 + + A +++++NV I+ AL + I++ D Sbjct: 78 I------LAYVGDGKIKVGKYAVFIENLDNVGVEAIKRALKDADIIIID 120 >gi|229546245|ref|ZP_04434970.1| conserved hypothetical protein [Enterococcus faecalis TX1322] gi|256852726|ref|ZP_05558096.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|307291059|ref|ZP_07570944.1| hypothetical protein HMPREF9509_01364 [Enterococcus faecalis TX0411] gi|229308769|gb|EEN74756.1| conserved hypothetical protein [Enterococcus faecalis TX1322] gi|256711185|gb|EEU26223.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|306497713|gb|EFM67245.1| hypothetical protein HMPREF9509_01364 [Enterococcus faecalis TX0411] gi|315030758|gb|EFT42690.1| conserved hypothetical protein [Enterococcus faecalis TX4000] Length = 164 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L R L+ + + + R +L D+ G Sbjct: 4 KLIILRGNSGSGKTTIAKALHRCLKEQ----------SLLISQDVVRREMLRVK-DKTGN 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S ++ L E + Sbjct: 53 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEMNHLFEGN 97 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 98 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 127 >gi|222529027|ref|YP_002572909.1| guanylate kinase [Caldicellulosiruptor bescii DSM 6725] gi|222455874|gb|ACM60136.1| guanylate kinase [Caldicellulosiruptor bescii DSM 6725] Length = 199 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 38/227 (16%), Positives = 74/227 (32%), Gaps = 50/227 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M GL I G G GK T + L + TR+P + Sbjct: 1 MREGLLIVISGPAGTGKGTVVGRLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + +A ++ ++ + AL +G ++ L Sbjct: 61 EEEIKNERFLEYAEYNNNYYGTPKDFVFEALGKGYDVI--------------------LE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +++ + +++V D +I LP + KR+ R + E E Sbjct: 101 IETKGALQIKKVFSDAVLIFLLPPSIEELYKRLVKRGTESEDEIRARLE----------- 149 Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215 IA+N+ P+ +++ + A I I+ E ++ R Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189 >gi|260822581|ref|XP_002606680.1| hypothetical protein BRAFLDRAFT_209525 [Branchiostoma floridae] gi|229292024|gb|EEN62690.1| hypothetical protein BRAFLDRAFT_209525 [Branchiostoma floridae] Length = 671 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 44/234 (18%), Positives = 73/234 (31%), Gaps = 57/234 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCG 58 M G I G GAGKTT +L R L + D+ G P AE + Sbjct: 1 MQKGNNIILMGSPGAGKTTVGRILARMLDKPVVDIDNDHLESYWGIPVAEQLSRL---GP 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 AE EA++ A ++ S + Sbjct: 58 DSFLQAEGEALLNFTAE---------------DCVIS-------------LSGSNPMHQR 89 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +++ I+ + LD+P L R++ R + D++ + RQ F Sbjct: 90 AMEHITTLGT----VVFLDVPSADILHRLEVMKVNRIVGQGPETDMADIL---RYRQQFY 142 Query: 179 DIARNQPDR--CHIVDSAHSFQSVATNILNIVWELV------QKRVSPLSSKKD 224 + R ++ A +I V E++ K +S S K+ Sbjct: 143 E------GRYDIRVLCGN---NESAEDIARKVQEVLTWHKNSNKHISTRQSTKE 187 >gi|60832495|gb|AAX37013.1| guanylate kinase 1 [synthetic construct] Length = 198 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 47/226 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 1 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 44 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G + R + I A G + + S A Q + ++ Sbjct: 45 -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 99 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 155 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +P +V S + + E ++K Sbjct: 156 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 191 >gi|305665197|ref|YP_003861484.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Maribacter sp. HTCC2170] gi|88709949|gb|EAR02181.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Maribacter sp. HTCC2170] Length = 381 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 64/191 (33%), Gaps = 22/191 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI+ EG GAGKTT + + + K P E G F E Sbjct: 180 FIAIEGNIGAGKTTLANKIAQDYNGKLVLERFADNPFLPKFYE-------DQGRYAFPLE 232 Query: 66 AEAIVFAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQE 122 F A R ++ + L + ++ D + S + L Sbjct: 233 MS---FLADRYQQFTDDTSQFDLFKNFMV-SDYDIYKSLIFAQVTLQKDEFNLYRKLFNL 288 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + P + L D L+ ++NR + E + + + +K + + D + Sbjct: 289 MYKEVKKPRIYVYLYQSTDRLLENIKNRGRVYEQSI-------EPIYLDKINKGYFDFFK 341 Query: 183 NQPD-RCHIVD 192 + P+ I+D Sbjct: 342 SYPEQNTLIID 352 >gi|325522620|gb|EGD01149.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Burkholderia sp. TJI49] Length = 638 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 31/87 (35%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T +L+++ L + LL G + Sbjct: 473 GLSGAGKSTIANLVEKRLHALGKHTY-----------------LLDGDNVRHGLNRDLGF 515 Query: 71 FAAARLD---HVENVIRPALMEGKILL 94 A R++ V V R L G I+L Sbjct: 516 TEADRVENIRRVAEVARLMLDAGLIVL 542 >gi|306846364|ref|ZP_07478915.1| fructose transport system kinase [Brucella sp. BO1] gi|306273207|gb|EFM55098.1| fructose transport system kinase [Brucella sp. BO1] Length = 218 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCGVD 60 G I G GAGK+T L + + + G + + LL Sbjct: 27 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILDQRGLLDRKGS 86 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 87 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLELSRAAASVVGPEHRILLVEG 139 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176 >gi|217969819|ref|YP_002355053.1| sulfate adenylyltransferase, large subunit [Thauera sp. MZ1T] gi|217507146|gb|ACK54157.1| sulfate adenylyltransferase, large subunit [Thauera sp. MZ1T] Length = 639 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK++ +L+++ L + + LL G + Sbjct: 466 FTGLSGAGKSSIANLVEKKLHALGHHTY-----------------LLDGDNVRHGLNKDL 508 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++ V V + + G I+L A+ S + + ++E Sbjct: 509 GFTDADRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRSERRMARGLVEEGEF 560 Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 E + +D P+++ R R L+ +D Sbjct: 561 VE------VFVDTPLEVAEARDPKGLYKKARRGELKNFTGID 596 >gi|88658097|ref|YP_507247.1| adenylate kinase [Ehrlichia chaffeensis str. Arkansas] gi|88599554|gb|ABD45023.1| adenylate kinase [Ehrlichia chaffeensis str. Arkansas] Length = 221 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 42/236 (17%), Positives = 78/236 (33%), Gaps = 61/236 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVDEFGA 64 G G+GK T +L + V T + T R V+ S D Sbjct: 11 GPPGSGKGTQCHILSKIYST--ISVISTGDLLRSEAKLDTDDGRKIRQVIESG--DLVSD 66 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEI 123 + +FA + + V L++G R+ SQ FL + L+E Sbjct: 67 DIVCKMFAKS----ISRVKSGFLLDGF----------------PRNLSQAEFLTEILEEY 106 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC---LDYFERKDVMI----------- 169 + + D I L L ++ R+ R + L++F+R I Sbjct: 107 NSRI---DIVIQLQLDLETIKNRLYGRIVCKNCGQVSNLNFFDRAIDEIVCKFCKSSQLD 163 Query: 170 ----------HEKRRQIFLDIARNQP---DRCHIVDSAHSFQSVATNILNIVWELV 212 ++ Q +I + + D+ +D+ + V +I + + L+ Sbjct: 164 YRYDDKVEVIIKRVNQYDREIKKLENYYRDKIVCIDAGKPIEEVTCDIKDKIAHLI 219 >gi|17988166|ref|NP_540800.1| putative fructose transport system kinase [Brucella melitensis bv. 1 str. 16M] gi|17983925|gb|AAL53064.1| pantothenate kinase [Brucella melitensis bv. 1 str. 16M] Length = 213 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 22 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 81 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 82 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 134 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 135 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 171 >gi|308178484|ref|YP_003917890.1| hypothetical protein AARI_27080 [Arthrobacter arilaitensis Re117] gi|307745947|emb|CBT76919.1| conserved hypothetical secreted protein [Arthrobacter arilaitensis Re117] Length = 183 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 51/209 (24%), Gaps = 58/209 (27%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+G TT + + D P R Sbjct: 13 GASGSGTTTLARAVADAWSVPHADSDDYFWIPTDPPYSKQRA------------------ 54 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 A R + V P +L G L + Sbjct: 55 -PADRSRLMNEVFVP---RKAWVLS-----------GSIQGWGDDVLAHVDAF------- 92 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------RKDVMIHEKRRQIF 177 + L L ++ ++R+ R +LR S DY E D + R Sbjct: 93 ---VFLTLDPEVRMRRLAERETLRLSR--DYLEPGAMGEFMVWAGGYDDPEFSGRSRAGH 147 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILN 206 + + +DSA + I++ Sbjct: 148 EKWLKTEERPVLRLDSAQPVAQMCQAIVD 176 >gi|288922954|ref|ZP_06417113.1| Polynucleotide 5'-hydroxyl-kinase [Frankia sp. EUN1f] gi|288345714|gb|EFC80084.1| Polynucleotide 5'-hydroxyl-kinase [Frankia sp. EUN1f] Length = 314 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 28/148 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G+ G+GK+T + L+ + V V+R+P R L G+ E Sbjct: 12 GLPGSGKSTAARRRRDQLRAAGHRAVVVSRDP--------LRDQL---GLTYGDTAGEKH 60 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 V A + L G ++ D + + A Q R + +L+ ++ V+ Sbjct: 61 VTAVRDAQ-----VNTLLRAGVNVIVD---EMNLAAQYVRHWMET----ALRAGALFSVL 108 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESA 157 D T D+ V++ ++R R A Sbjct: 109 -DLT---DVDVELCVRRDTLRPEPMPGA 132 >gi|225548831|ref|ZP_03769808.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 94a] gi|225370434|gb|EEG99870.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 94a] Length = 347 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 FI+ G G GKTT I +L FL +KN +++ Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFS 68 >gi|20089787|ref|NP_615862.1| ATPase [Methanosarcina acetivorans C2A] gi|19914728|gb|AAM04342.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 640 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 4/70 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+ G GAGK+T + + R+L V P S + Sbjct: 269 QRGILIA--GPPGAGKSTFAAGVARYLNDHGQVVKTMESPRDLQVPPEITQY--SPLNGK 324 Query: 62 FGAEAEAIVF 71 A+ ++ Sbjct: 325 MEDTADLLLL 334 >gi|83748970|ref|ZP_00945979.1| Deoxyguanosine kinase [Ralstonia solanacearum UW551] gi|207744199|ref|YP_002260591.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia solanacearum IPO1609] gi|83724393|gb|EAP71562.1| Deoxyguanosine kinase [Ralstonia solanacearum UW551] gi|206595604|emb|CAQ62531.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia solanacearum IPO1609] Length = 214 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 53/179 (29%), Gaps = 26/179 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT L L+ + P P + Sbjct: 9 IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPLQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ A RL A + G+ ++ D FL + + L L + Q Sbjct: 62 RFLLQRAQRLAA----WHKATLAGERIVADSFLPRDRLFAQLTLPADELV---LYDAMAQ 114 Query: 127 EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + P D + L + L R+ R E+ DV E+ + ++ Sbjct: 115 ALAPPPQRIDLVVCLQARAEDLLPRIARRAVPFEAGI-------DVEYLERICAAYGEL 166 >gi|70983199|ref|XP_747127.1| conserved hypothetical protein [Aspergillus fumigatus Af293] gi|66844752|gb|EAL85089.1| conserved hypothetical protein [Aspergillus fumigatus Af293] gi|159124011|gb|EDP49130.1| conserved hypothetical protein [Aspergillus fumigatus A1163] Length = 932 Score = 40.0 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 5/55 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY-DVHVTREPGGTPAA----EAARHVLLS 56 I EG EG GK+T + L DV RE G A E +H++ Sbjct: 112 IVLEGNEGTGKSTVARVYANVLFSTGITDVLTFREISGAALAAQGCEGLKHLISD 166 >gi|323453480|gb|EGB09351.1| hypothetical protein AURANDRAFT_36905 [Aureococcus anophagefferens] Length = 577 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 19/32 (59%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 I F GI G GK+T +S + +L+ DV +T Sbjct: 375 IVFVGINGVGKSTSLSKVAYYLKEHGVDVMIT 406 >gi|323142200|ref|ZP_08077034.1| guanylate kinase [Phascolarctobacterium sp. YIT 12067] gi|322413263|gb|EFY04148.1| guanylate kinase [Phascolarctobacterium sp. YIT 12067] Length = 211 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 6/119 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G+ + G GAGK T +L+ L Y + TR P + V + Sbjct: 11 KGVLLVVSGPSGAGKGTICQMLRDQLPDLGYSISVTTRAPRTGEVDGESYFFKTIPDVKQ 70 Query: 62 FGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + E + +A ++ + L G+ +L + +D A Q ++ + +F+ Sbjct: 71 MIEKGELLEYAEVYGNYYGTPRKYVEEQLESGRDVLLE--IDIQGALQIKKRFPEGVFV 127 >gi|319652891|ref|ZP_08006997.1| adenylyl-sulfate kinase [Bacillus sp. 2_A_57_CT2] gi|317395468|gb|EFV76200.1| adenylyl-sulfate kinase [Bacillus sp. 2_A_57_CT2] Length = 199 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 41/162 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + L R+ + +L G + Sbjct: 32 FTGLSGSGKSTIANAVSHELFRQGIN-----------------EYVLDGDNVRHGLNKDL 74 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R +++ V + + GKI+ + A+ S + +E Sbjct: 75 GFSEADRNENIRRIGEVAKLFVDSGKIV--------TTAFISPFRSDRETVRALFEE--- 123 Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 E + +D P++ +R R ++ +D Sbjct: 124 GEF---IEVFIDCPLEECERRDPKKLYAKARRGEIKNFTGID 162 >gi|310659164|ref|YP_003936885.1| guanylate kinase [Clostridium sticklandii DSM 519] gi|308825942|emb|CBH21980.1| guanylate kinase [Clostridium sticklandii] Length = 204 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 57/173 (32%), Gaps = 36/173 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL + G GAGK T ++ + TR P + + + Sbjct: 3 KKGLLVVVSGPSGAGKGTICKNFMELNKQMLLSISSTTRNPRENEIDGVNYNFITKQDFE 62 Query: 61 EFGAEAEAIVFAAARLDHV--------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + + + HV + + + +GK +L Sbjct: 63 DLIGTDSLLEYV-----HVFGNYYGTPKKWVLECIEKGKDVL------------------ 99 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 L ++ + + V+E PD ++ LP LK ++NR R + ++ E + Sbjct: 100 --LEIEIVGAMKVKEKYPDAILVFVLPP--SLKELKNRIVTRGTETIEQIENR 148 >gi|256368528|ref|YP_003106034.1| uridine kinase [Brucella microti CCM 4915] gi|255998686|gb|ACU47085.1| uridine kinase [Brucella microti CCM 4915] Length = 213 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 22 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 81 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 82 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 134 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 135 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 171 >gi|154336847|ref|XP_001564659.1| dynein heavy chain [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061694|emb|CAM38725.1| putative dynein heavy chain [Leishmania braziliensis MHOM/BR/75/M2904] Length = 4242 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 24/118 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GK+T + +L+ LQR V P P R LL + Sbjct: 1943 VVLVGPSGSGKSTLVKVLRHALQRLGKMVPLYIVNPKALP-----RDQLLG----HMDPD 1993 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 F D + V++ + CD +++SL + Sbjct: 1994 TR-EWFDGVLTDAAKKVVKEETSVQSWIFCD-------------GDIDPEWVESLNSV 2037 >gi|124028360|ref|YP_001013680.1| ABC transporter [Hyperthermus butylicus DSM 5456] gi|123979054|gb|ABM81335.1| predicted ABC transporter [Hyperthermus butylicus DSM 5456] Length = 216 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG--VDE 61 G + G G+GKTT + +L L+ +V V P + A+ R V++ DE Sbjct: 30 GELVVIVGPNGSGKTTLLRILAGLLRPSRGEVRVCGHPPWSLEAKRCRGVVMHHSFLYDE 89 Query: 62 FGAEAEAIVFA 72 ++A Sbjct: 90 LTVAENIELYA 100 >gi|146299242|ref|YP_001193833.1| deoxynucleoside kinase [Flavobacterium johnsoniae UW101] gi|146153660|gb|ABQ04514.1| deoxynucleoside kinase [Flavobacterium johnsoniae UW101] Length = 204 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 64/199 (32%), Gaps = 38/199 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT LL + + EP + + L + + Sbjct: 3 IAIAGNIGAGKTTLTKLLAKHFK---------WEP---HYEDVVDNPYLDDFYHQMERWS 50 Query: 67 EAI-VFAAARLDHVENVIRPALMEGKILLCDR--------FLDSSYAYQGERDSSQHLFL 117 + ++ IR GK ++ DR F + YA G S Sbjct: 51 FNLQIYFLNSRFRQVQQIR---ESGKKIIQDRTIYEDAYIFAPNLYA-MGLMTSRDFENY 106 Query: 118 DSLQEISVQEVM-PDCTIILD--LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 SL E+ V PD I L +P +G + R E++ + + Sbjct: 107 TSLFELMESLVKAPDLLIYLRSTIPNLVGQ--IHKRGREYENSI-------SIDYLSRLN 157 Query: 175 QIFLDIARNQ-PDRCHIVD 192 + + + + I+D Sbjct: 158 ERYEAWIQTYTKGKLLIID 176 >gi|325967750|ref|YP_004243942.1| GTPase [Vulcanisaeta moutnovskia 768-28] gi|323706953|gb|ADY00440.1| GTPase [Vulcanisaeta moutnovskia 768-28] Length = 272 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 38/102 (37%), Gaps = 15/102 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEA-----ARHVL 54 FI G G+GKTT +S +L+ YDV + P + AR ++ Sbjct: 21 FIV--GTAGSGKTTLVSTFAEWLENNQYDVAIVNLDPAVEYVPYVPDIDIRDVISARELM 78 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G+ AI A R ++N + +L D Sbjct: 79 RKYKLGPNGSIIAAIDMLAVRAQEIKNQVMDIGAN--YVLID 118 >gi|298250206|ref|ZP_06974010.1| adenylylsulfate kinase [Ktedonobacter racemifer DSM 44963] gi|297548210|gb|EFH82077.1| adenylylsulfate kinase [Ktedonobacter racemifer DSM 44963] Length = 187 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 21/34 (61%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 N+G I F G+ GAGK+T L++ L++ +V Sbjct: 3 NTGFTIWFTGLSGAGKSTLSDALEKRLRQHGRNV 36 >gi|111115475|ref|YP_710093.1| spermidine/putrescine ABC transporter, ATP- binding protein [Borrelia afzelii PKo] gi|216263662|ref|ZP_03435657.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia afzelii ACA-1] gi|123145659|sp|Q0SML1|POTA_BORAP RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|110890749|gb|ABH01917.1| spermidine/putrescine ABC transporter, ATP- binding protein [Borrelia afzelii PKo] gi|215980506|gb|EEC21327.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia afzelii ACA-1] Length = 347 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 20/32 (62%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 FI+ G G GKTT I +L FL +KN +++ Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYF 66 >gi|288917127|ref|ZP_06411497.1| adenylylsulfate kinase [Frankia sp. EUN1f] gi|288351496|gb|EFC85703.1| adenylylsulfate kinase [Frankia sp. EUN1f] Length = 613 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 18/36 (50%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 GL I F G+ GAGK+T LL L + V + Sbjct: 426 RRGLTILFTGLSGAGKSTLAGLLACRLLERGRRVTL 461 >gi|163733625|ref|ZP_02141068.1| hypothetical protein RLO149_18278 [Roseobacter litoralis Och 149] gi|161393413|gb|EDQ17739.1| hypothetical protein RLO149_18278 [Roseobacter litoralis Och 149] Length = 208 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 64/189 (33%), Gaps = 25/189 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60 N I+ G +GK+T L L G R L++ Sbjct: 21 NKRRLIALAGPPASGKSTLAHALADHLPNS----CALPMDGFHLDNRILRERGLIARKGA 76 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS-------- 112 + + RL + ++V+ P L DR LD + A G ++S Sbjct: 77 PETFDVAGLQHLLQRLQNEDDVVYP--------LFDRHLDCAVAGAGIAEASATTVIVEG 128 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD---YFERKDVMI 169 +L LD+ ++ + D + + + D+ R+ R+ + D E+ D+ Sbjct: 129 NYLLLDAPYWRDLRALW-DFAVYVSVSPDVLRDRLLTRWHDHGFSREDAQAKVEQNDMPN 187 Query: 170 HEKRRQIFL 178 E R L Sbjct: 188 AETTRNALL 196 >gi|73670632|ref|YP_306647.1| shikimate kinase [Methanosarcina barkeri str. Fusaro] gi|72397794|gb|AAZ72067.1| shikimate kinase [Methanosarcina barkeri str. Fusaro] Length = 169 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 74/206 (35%), Gaps = 44/206 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ G+ GAGK+T L + L DV H+ RE G P E Sbjct: 3 ITLIGMAGAGKSTIGRALAKRLGYTFIDVDHLIRENTGMPLQTLIDK---EGDSAFIRFE 59 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-SLQEIS 124 EAI+ +E + R + G ++ S A + S+ +FLD + + I+ Sbjct: 60 EEAIL-------SLEQIDRSVISPGGSVI-----YSEKAMNHLKKISKIIFLDTAFRSIA 107 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + R + LR+ + + FE + ++K + D + Sbjct: 108 RRLPN---------------ARKRGIVGLRDRSLKELFE-ERKGFYQK----YADFSIKL 147 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWE 210 R + Q +A I+ I +E Sbjct: 148 KGR-------ENIQDIAEMIVEICFE 166 >gi|15594987|ref|NP_212776.1| spermidine/putrescine ABC transporter, ATP-binding protein (potA) [Borrelia burgdorferi B31] gi|195941462|ref|ZP_03086844.1| spermidine/putrescine ABC transporter, ATP-binding protein (potA) [Borrelia burgdorferi 80a] gi|216264359|ref|ZP_03436351.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 156a] gi|218249244|ref|YP_002375143.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi ZS7] gi|221217859|ref|ZP_03589326.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 72a] gi|223889366|ref|ZP_03623952.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 64b] gi|224532967|ref|ZP_03673575.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi WI91-23] gi|224533360|ref|ZP_03673954.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi CA-11.2a] gi|225550006|ref|ZP_03770967.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 118a] gi|226320359|ref|ZP_03795928.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 29805] gi|226321340|ref|ZP_03796867.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi Bol26] gi|81816027|sp|O51587|POTA_BORBU RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|2688562|gb|AAB91525.1| spermidine/putrescine ABC transporter, ATP-binding protein (potA) [Borrelia burgdorferi B31] gi|215980832|gb|EEC21639.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 156a] gi|218164432|gb|ACK74493.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi ZS7] gi|221192165|gb|EEE18385.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 72a] gi|223885052|gb|EEF56156.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 64b] gi|224512084|gb|EEF82477.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi WI91-23] gi|224513525|gb|EEF83882.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi CA-11.2a] gi|225369465|gb|EEG98917.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 118a] gi|226233136|gb|EEH31888.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi Bol26] gi|226234222|gb|EEH32934.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi 29805] gi|312148336|gb|ADQ30995.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi JD1] gi|312149432|gb|ADQ29503.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia burgdorferi N40] Length = 347 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 FI+ G G GKTT I +L FL +KN +++ Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFS 68 >gi|288923619|ref|ZP_06417727.1| ABC transporter related protein [Frankia sp. EUN1f] gi|288345034|gb|EFC79455.1| ABC transporter related protein [Frankia sp. EUN1f] Length = 625 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 43/172 (25%) Query: 4 GLFISFEGIEGAGKTTHISLLKR--------------FLQRKNYDVHVTREPGGTPAAEA 49 G FI+ G G+GK+T LL R L+ + +TR Sbjct: 361 GEFIAVTGPTGSGKSTLARLLCRIEDPTEGTISYGGVELRAASRTEVLTR-----IGLVP 415 Query: 50 ARHVLLSC---GVDEFGAEAE-AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 R ++L+ G E E A + AA ++ I + ++ +R Sbjct: 416 QRPLVLTGTIADNLRLGREIELADLRAACHAAALDEFIMSLPDQYDTVVGER-------- 467 Query: 106 QGERDSSQHLFLDSLQEISVQEV-MPDCTII------LDLPVDIG-LKRVQN 149 G Q L ++ + P ++ LD+ + L+R+++ Sbjct: 468 GGTLSGGQGQRLA----LARGLLGRPAVLVLDDVTSALDVETEAAVLRRLRD 515 >gi|254671832|emb|CBA03981.1| cell division protein [Neisseria meningitidis alpha275] Length = 350 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 157 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 211 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 212 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 262 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 263 AMPDAPHEIIVVLD 276 >gi|199597679|ref|ZP_03211107.1| hypothetical protein LRH_11999 [Lactobacillus rhamnosus HN001] gi|258509824|ref|YP_003172575.1| kinase [Lactobacillus rhamnosus GG] gi|199591486|gb|EDY99564.1| hypothetical protein LRH_11999 [Lactobacillus rhamnosus HN001] gi|257149751|emb|CAR88724.1| Kinase [Lactobacillus rhamnosus GG] gi|259651085|dbj|BAI43247.1| conserved hypothetical protein [Lactobacillus rhamnosus GG] Length = 172 Score = 40.0 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 63/211 (29%), Gaps = 50/211 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L++ L + + R +L+ Sbjct: 1 MKQ--LIILRGNSGSGKTTTAKALRKHLAN-----------SLLISQDVVRRDMLAEKDK 47 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I A R +I++ + + S+ Y L +L Sbjct: 48 PNSPNIELIDLIA----------RFGFSHQQIVIVE-GILSAARY--------GQMLKAL 88 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR-QIFLD 179 + Q DL D L+R +R +H R +L Sbjct: 89 MTTADQS----LVYYFDLSFDETLRRHAHRPQAAAFGAE--------AMHRWFRPHDYLG 136 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + H++ + S +V + IL + + Sbjct: 137 VPNE-----HLIQADQSQDTVVSRILADLNK 162 >gi|310791932|gb|EFQ27459.1| thermoresistant glucokinase family carbohydrate kinase [Glomerella graminicola M1.001] Length = 182 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 65/217 (29%), Gaps = 51/217 (23%) Query: 7 ISF-EGIEGAGKTTHISLLKRFLQR---KNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 I F G G+GKTT L L + D H EA D + Sbjct: 8 IVFLTGPTGSGKTTIAKYLTESLHMNFIEGDDYHPKENVEKMHRGEAL------TDDDRW 61 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGERDSSQHLFLDSL 120 G R + + + L G ++ C S+ AY+ + H D Sbjct: 62 GWLDSL------RDEALRELESDGL-RGVVVAC-----SALKRAYRDVLRGASHPEKDIF 109 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 L P D+ +RV+NR+ A L F + Sbjct: 110 VNFVT----------LHAPEDVLFERVKNRHGHFAGANL-------------VHSQFQSL 146 Query: 181 ---ARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++ D +D + V + L + EL+ + Sbjct: 147 DPPQEDEAD-VVGIDVQPPMEEVERDALERLEELLSR 182 >gi|171186018|ref|YP_001794937.1| GTPase [Thermoproteus neutrophilus V24Sta] gi|170935230|gb|ACB40491.1| protein of unknown function ATP binding [Thermoproteus neutrophilus V24Sta] Length = 250 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 M + FI G G+GK+T +S L +L+ + +DV Sbjct: 2 MYTVFFI---GTAGSGKSTLVSALSNWLEDQGFDV 33 >gi|55959192|emb|CAI15062.1| guanylate kinase 1 [Homo sapiens] Length = 217 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 71/226 (31%), Gaps = 47/226 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 22 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 65 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G + R + I A G + + S A Q + ++ Sbjct: 66 -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119 Query: 116 FLDS----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVM 168 LD ++ I ++ P I + + + +R++ R + E + + Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 176 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +P +V S + + E ++K Sbjct: 177 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 212 >gi|326798926|ref|YP_004316745.1| Guanylate kinase [Sphingobacterium sp. 21] gi|326549690|gb|ADZ78075.1| Guanylate kinase [Sphingobacterium sp. 21] Length = 188 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 27/174 (15%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDE 61 G I F GAGKTT + L K TREP + + Sbjct: 3 GKLIIFSAPSGAGKTTIVKWLLEKFNDKIAFSISASTREPRDGEVNGKDYYFITKEEFLH 62 Query: 62 FGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A+ E + V++ + I MEGK ++ D G + Sbjct: 63 RIAKKEFVEFEEVYSGTFYGTLRAEIERIWMEGKAVIFD------IDVIGGLHLKKKFGE 116 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++L P D+ ++R++ R + E + E+ + Sbjct: 117 NALAIFVQ-------------PPSLDVLVERLRGRGTDTEEKLKERIEKAGKEL 157 >gi|312903602|ref|ZP_07762778.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|310632955|gb|EFQ16238.1| conserved hypothetical protein [Enterococcus faecalis TX0635] gi|315577212|gb|EFU89403.1| conserved hypothetical protein [Enterococcus faecalis TX0630] Length = 188 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L DE G Sbjct: 28 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 77 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151 >gi|209549571|ref|YP_002281488.1| hypothetical protein Rleg2_1977 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535327|gb|ACI55262.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 173 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 20/49 (40%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 + I F G+ G+GKTT L + L V + + AR V Sbjct: 1 MLIIFGGLPGSGKTTVARALAKRLGAVYVRVDTIEQAIRASGGDPARDV 49 >gi|124027623|ref|YP_001012943.1| hypothetical protein Hbut_0744 [Hyperthermus butylicus DSM 5456] gi|123978317|gb|ABM80598.1| conserved crenarchaeal protein [Hyperthermus butylicus DSM 5456] Length = 340 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 11/92 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRK------NYDVHVTREPGGTPAA-EAARHVLLS-CGVDEF 62 G EG GKT + L L+ D R+PG A + R ++L Sbjct: 31 GPEGCGKTRLLRELVARLREHSSYLVAYIDALEERDPGRAVAGSDELRRLILDAVRSAGG 90 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 G +V+A AR V I L+EG+ ++ Sbjct: 91 GPLGVILVYAVAR---VLASIERRLVEGRHVV 119 >gi|226874831|ref|NP_001152862.1| guanylate kinase isoform a [Homo sapiens] gi|119590262|gb|EAW69856.1| guanylate kinase 1, isoform CRA_e [Homo sapiens] gi|194383634|dbj|BAG64788.1| unnamed protein product [Homo sapiens] Length = 218 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 71/226 (31%), Gaps = 47/226 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 22 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPR------------- 65 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G + R + I A G + + S A Q + ++ Sbjct: 66 -PGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119 Query: 116 FLDS----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVM 168 LD ++ I ++ P I + + + +R++ R + E + + Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 176 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +P +V S + + E ++K Sbjct: 177 ME----------SSKEPGLFDVVIINDSLDQAYAELKEALSEEIKK 212 >gi|157826042|ref|YP_001493762.1| adenylate kinase [Rickettsia akari str. Hartford] gi|166219996|sp|A8GPC9|KAD_RICAH RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|157800000|gb|ABV75254.1| adenylate kinase [Rickettsia akari str. Hartford] Length = 212 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 39/237 (16%), Positives = 82/237 (34%), Gaps = 59/237 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIALGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY-QGERDSSQHLFLDS---L 120 EAE I + + V N I +++ FL SS AY G L+ Sbjct: 45 EAELINNYVKQGELVPNAIVNQVIKN-------FLLSS-AYKNGYILDGYPRNLEQAKFF 96 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------------- 159 + +++ I D+ ++ +KRV RYS + + Sbjct: 97 ESFIKEKIK---IIYFDVSDELLIKRVLGRYSCKNCRKIYNSYFLQPKTDNVCDVCGSST 153 Query: 160 -DYFERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 DY + + + +KR +++ + ++V+ + + Q + +I I+ Sbjct: 154 FDYRKDDNEEVVKKRIEVYKTETYPLIDYYKNSGNFYLVNGSKNEQEIEIDIQKILK 210 >gi|307721117|ref|YP_003892257.1| adenylate kinase [Sulfurimonas autotrophica DSM 16294] gi|306979210|gb|ADN09245.1| Adenylate kinase [Sulfurimonas autotrophica DSM 16294] Length = 216 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 40/237 (16%), Positives = 68/237 (28%), Gaps = 56/237 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T L + + R + + E G A Sbjct: 3 IILLGAPGAGKGTQAQFLTKK-----------YNIPQISTGDMLRAAIKAG--TEMGKMA 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +A A V + I L++ +I D + Y G + ++ Sbjct: 50 KA---AMDAGQLVTDDIIIGLVKDRIAQDD--CKNGYLLDGFPRTLPQAD-----AVTNA 99 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-------LDYFERKDVMIHE-------- 171 + D I +D+ + +KR+ R + S E KD E Sbjct: 100 GIEIDAVIEIDVADEEIVKRMSGRRAHLASGRTYHVIYNPSKIEGKDDETGEDLVQRDDD 159 Query: 172 ---------KRRQ--------IFLDIARNQPD-RCHIVDSAHSFQSVATNILNIVWE 210 K + +A+ P+ + VD V I++ + E Sbjct: 160 KEAVVLDRLKVYHEQTEPLIGYYKALAKKNPNLKYITVDGTADIADVEKAIVSELGE 216 >gi|283786698|ref|YP_003366563.1| adenosine 5-phosphosulfate kinase [Citrobacter rodentium ICC168] gi|282950152|emb|CBG89788.1| adenosine 5-phosphosulfate kinase [Citrobacter rodentium ICC168] Length = 201 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 53/148 (35%), Gaps = 34/148 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G+ + F G+ G+GK+T L+ L + + LL Sbjct: 26 HRGVVVWFTGLSGSGKSTIAGALEEALHKLGLSTY-----------------LLDGDNLR 68 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G ++ A R +++ V R L G ++L A+ R + + + Sbjct: 69 HGLCSDLGFSDADREENIRRVGEVARLMLDAGLVVLT--------AFISPRRAERQWVRE 120 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 + E + + + +D P++I R Sbjct: 121 RVGE--GRFIE----VFVDTPLEICEAR 142 >gi|238791725|ref|ZP_04635362.1| LAO/AO transport system kinase [Yersinia intermedia ATCC 29909] gi|238728829|gb|EEQ20346.1| LAO/AO transport system kinase [Yersinia intermedia ATCC 29909] Length = 325 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64 G GAGK+T + L L + + V + +P GG+ + R + LS F Sbjct: 55 GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPISGGSILGDKTRMLNLSRAEHAFVR 114 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILL 94 + +I G ++ Sbjct: 115 PVPSGGHLGGISQSTRELILLCEAAGYDVI 144 >gi|227539234|ref|ZP_03969283.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33300] gi|227240916|gb|EEI90931.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33300] Length = 170 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 31/170 (18%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60 G I F GAGKTT + L K TREP G + + Sbjct: 2 KGKLIIFSAPSGAGKTTIVRHLLNKYPDKIEFSISASTREPRGEEVDGKDYYFISKEEFL 61 Query: 61 EFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A+ E I V++ + + + +GK ++ D Sbjct: 62 HKIAKQEFIEFEEVYSGTFYGTLRSEVERIWEKGKHVIFD-------------------- 101 Query: 117 LDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 +D + + ++ PD +I + P ++ R++ R + E + F Sbjct: 102 IDVVGGLRLRSKFPDQALSIFVQ-PPSLEVLKDRLRGRGTDSEDKLKERF 150 >gi|183222060|ref|YP_001840056.1| NadR family transcriptional regulator [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189912126|ref|YP_001963681.1| NAD metabolism ATPase/kinase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167776802|gb|ABZ95103.1| ATPase/kinase involved in NAD metabolism [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167780482|gb|ABZ98780.1| Putative transcriptional regulator, NadR family [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 347 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 63/181 (34%), Gaps = 40/181 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G E GKTT L Q E AR L + A Sbjct: 157 IVLTGSESVGKTTLAKKLADHFQ-------------TNWIPEYARDYL----EKKSTPMA 199 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E+ A+ H+ + + A IL D L ++ Y Q + L E ++ Sbjct: 200 ESDFLPIAKG-HLLSEVEAAKSSHGILFLDTDLLTTKVY--LERYYQRE-IPWLTERALG 255 Query: 127 EVMPDCTIILDLPV--------DIGLKR--VQNRY-SLRESACLDYF-------ERKDVM 168 D ++ LD+ + D+G +R ++ R+ E A D+F ER+ + Sbjct: 256 LQY-DTSLFLDIDIPWEKDKLRDLGEEREGMKTRFLEAMEEAKRDFFWVKGNFMERERLA 314 Query: 169 I 169 I Sbjct: 315 I 315 >gi|186472046|ref|YP_001859388.1| ABC transporter related [Burkholderia phymatum STM815] gi|184194378|gb|ACC72342.1| ABC transporter related [Burkholderia phymatum STM815] Length = 254 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE 48 SG FI+ G G GK+T + +L L+R + V V P P E Sbjct: 31 SGEFITVVGPSGCGKSTLLKILAGILRRSSGKVAVAGRPIDGPNRE 76 >gi|78189187|ref|YP_379525.1| shikimate kinase [Chlorobium chlorochromatii CaD3] gi|115312143|sp|Q3AR93|AROK_CHLCH RecName: Full=Shikimate kinase; Short=SK gi|78171386|gb|ABB28482.1| shikimate kinase [Chlorobium chlorochromatii CaD3] Length = 190 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 43/211 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G G+GK+T LL L Y+ ++ + G Sbjct: 7 LIFLTGFSGSGKSTIGPLLANSL---GYEFVDLDALIERECGKSINQIFAEAGE------ 57 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA H E + LM K ++ G Q + +++ Sbjct: 58 -------AAFRQHEEQTLETLLMRRKTVVS----------LGGGVLEQPRAFELVRQAGT 100 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFERKDVMIHEKRRQIFLDIARN 183 + L PV +R+ N+ + + ++++ +K ++ +AR Sbjct: 101 -------VVYLKSPVKTLARRLSNKTDRPLLKGEQGEKLSQEEIE--QKIAEL---LARR 148 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +P R + + ++ A I + V EL +K Sbjct: 149 EP-RYEC--ADITVETDAKRIGSTVEELTRK 176 >gi|315497199|ref|YP_004086003.1| dephospho-CoA kinase [Asticcacaulis excentricus CB 48] gi|315415211|gb|ADU11852.1| dephospho-CoA kinase [Asticcacaulis excentricus CB 48] Length = 196 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 75/215 (34%), Gaps = 40/215 (18%) Query: 11 GIEGA---GKTTHISLLKRFLQRKNYDV----------HVTREPGGTPAAEAARHVLLSC 57 G+ G+ GK+T + + V + T EP EA VL Sbjct: 5 GLTGSIGMGKSTIARMFAD----EGLPVWDADETVHRLYATSEPLKAALVEAFGEVLTDG 60 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-F 116 VD A+ + A+ D + AL+ + DR ++ + + L Sbjct: 61 SVD----RAKLSLNLKAKPDGFARLN--ALVHPATV-ADR--EAFLVHHAAAGTRLTLCD 111 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + L E Q D +++ P ++ RV R + D R+ ++RR Sbjct: 112 IPLLFETGAQTSF-DKVVVVSAPPEVQAARVLARPGMTAEKFADILARQMPDAEKRRRAD 170 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 F ++D++ + Q+ + I+ +L Sbjct: 171 F------------VIDTSQTLQANRQQVREIIRDL 193 >gi|224532153|ref|ZP_03672785.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia valaisiana VS116] gi|224511618|gb|EEF82024.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia valaisiana VS116] Length = 347 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 FI+ G G GKTT I +L FL +KN +++ Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLNQKNGEIYFFS 68 >gi|293572988|ref|ZP_06683930.1| deoxyguanosIne kinase [Enterococcus faecium E980] gi|291606890|gb|EFF36270.1| deoxyguanosIne kinase [Enterococcus faecium E980] Length = 219 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 42/234 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++ + Y+ E A E Sbjct: 4 IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 48 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114 A + L+ I+ A+ + +L DR + DS A + E Sbjct: 49 QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 107 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + ++E+ + + PD + + + D L+R++ R E F+ +++ Sbjct: 108 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 164 Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 + + + I +D + + V I + E+ Q ++ Sbjct: 165 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTELA 218 >gi|254421825|ref|ZP_05035543.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335] gi|196189314|gb|EDX84278.1| ABC transporter, ATP-binding protein [Synechococcus sp. PCC 7335] Length = 951 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 45/234 (19%), Positives = 86/234 (36%), Gaps = 41/234 (17%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCG 58 + G FI+ G G+GK+T + LL F ++ V+ + A R V+L G Sbjct: 741 HPGEFIALVGPSGSGKSTVLRLLLGFESPQSGTVYYDNQDVAGLDVAAVRRQLGVVLQNG 800 Query: 59 VDEFGAEAE-----AIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 G+ E A++ AA + IR ME ++ + G Sbjct: 801 RINAGSLFENISGGALISLEDAWRAAEMAGFAEDIRSFPMEMHTVISEG--------GGN 852 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 Q L + +++ P+ ++LD + NR S LD ++ Sbjct: 853 LSGGQRQRLMIARALALN---PNI-LLLD----EATSALDNRTQAIVSQSLDRLNVTRIV 904 Query: 169 IHEKRRQIFLDIARNQPDRCHIVDSAH-----SFQSVATNILNIVWELVQKRVS 217 + + I DR +++ S SF +A + +L++++++ Sbjct: 905 VAHRLSTI------RHADRIYVIKSGRVVQQGSFDQLAQE-EGVFKQLIKRQMA 951 >gi|150024370|ref|YP_001295196.1| deoxynucleoside kinase [Flavobacterium psychrophilum JIP02/86] gi|149770911|emb|CAL42376.1| Probable deoxynucleoside kinase [Flavobacterium psychrophilum JIP02/86] Length = 204 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 30/195 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT LL + EP + + L + E Sbjct: 3 IAIAGNIGAGKTTLTKLLAKHFN---------WEP---HFEDVVDNPYLDDFYHQM--ER 48 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDS 119 + L+ + GK ++ DR + D+ + G + S Sbjct: 49 WSFNLQIYFLNSRFRQVLQIRESGKKIIQDRTIYEDAHIFAPNLHAMGLMTNRDFQNYSS 108 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L E+ V PD I L + N DY + + + + Sbjct: 109 LFELMEGLVGPPDLLIYL-------RSSIPNLVGQIHKRGRDYENSISIDYLSRLNERYE 161 Query: 179 DIARN-QPDRCHIVD 192 A + + I+D Sbjct: 162 AWAESYNKGKLLIID 176 >gi|221135324|ref|ZP_03561627.1| adenylylsulfate kinase [Glaciecola sp. HTCC2999] Length = 197 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 49/139 (35%), Gaps = 34/139 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T +LL++ L + + LL G + Sbjct: 32 GLSGSGKSTIANLLEQKLVAQGKHTY-----------------LLDGDNVRHGLCGDLGF 74 Query: 71 FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R++++ V + + G +++ A+ + + + L E + Sbjct: 75 SDKDRVENIRRISEVAKLFVDSGTLVIT--------AFISPFKADRDYCREILDE--SEF 124 Query: 128 VMPDCTIILDLPVDIGLKR 146 V I +D P+++ R Sbjct: 125 VE----IFIDTPLEVCEAR 139 >gi|37678296|ref|NP_932905.1| signal recognition particle GTPase [Vibrio vulnificus YJ016] gi|37197035|dbj|BAC92876.1| signal recognition particle GTPase [Vibrio vulnificus YJ016] Length = 437 Score = 40.0 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 240 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 295 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 296 TGADSASVIYDAIEAAKARGVDVVIAD 322 >gi|255656568|ref|ZP_05401977.1| guanylate kinase [Clostridium difficile QCD-23m63] gi|296449980|ref|ZP_06891744.1| guanylate kinase [Clostridium difficile NAP08] gi|296878361|ref|ZP_06902369.1| guanylate kinase [Clostridium difficile NAP07] gi|296261250|gb|EFH08081.1| guanylate kinase [Clostridium difficile NAP08] gi|296430659|gb|EFH16498.1| guanylate kinase [Clostridium difficile NAP07] Length = 205 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 53/167 (31%), Gaps = 26/167 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL + G GAGK T L + V TR+P + + Sbjct: 4 KKGLLLVVSGPSGAGKGTICKELLKENDTIKLSVSATTRKPRTGEVDGVNYFFISKEKFE 63 Query: 61 EFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E + E + +A ++ I L +G+ +L + QG + Sbjct: 64 EMIEKGEFLEYAQIYDNFYGTPKSAIMECLEKGQDVLLE------IEMQGAK-------- 109 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 ++E+ + I LP + R+ R + E+ F Sbjct: 110 -QIKEVCPEG-----VFIFVLPPSLEELKNRIVGRGTETEAEIEKRF 150 >gi|170078077|ref|YP_001734715.1| excinuclease ABC subunit A [Synechococcus sp. PCC 7002] gi|169885746|gb|ACA99459.1| excinuclease ABC, A subunit [Synechococcus sp. PCC 7002] Length = 941 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVL 54 G +S G+ G+GK+T + LL LQ N +V +E GG ++ V+ Sbjct: 632 GKLVSVTGVSGSGKSTLMNELLYPALQHSLNRNVPFPKELGGVKGLKSIDKVI 684 >gi|150024453|ref|YP_001295279.1| guanylate kinase [Flavobacterium psychrophilum JIP02/86] gi|149770994|emb|CAL42461.1| Guanylate kinase [Flavobacterium psychrophilum JIP02/86] Length = 191 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 10/104 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVL---- 54 MN G + F G+GKTT + L + L + TRE G E + + Sbjct: 1 MNKGKLLVFSAPSGSGKTTIVRHLLNQEDLNLEFSVSCTTREARGEETNEKDYYFISLED 60 Query: 55 --LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +EF E + +++ + +GK ++ D Sbjct: 61 FKKHIKAEEFVEWEEV--YRDNFYGTLKSEVERIWAKGKNVIFD 102 >gi|187923748|ref|YP_001895390.1| adenylyl-sulfate kinase [Burkholderia phytofirmans PsJN] gi|259586086|sp|B2T3K5|CYSC_BURPP RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|187714942|gb|ACD16166.1| Adenylyl-sulfate kinase [Burkholderia phytofirmans PsJN] Length = 179 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 14/85 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T + L + L + V + R L + E + Sbjct: 13 GLSGAGKSTLANALHQRLMEAGHAAIVL-------DGDVLRRGLNADLGFTPEDRTENL- 64 Query: 71 FAAARLDHVENVIRPALMEGKILLC 95 R+ HV + + +G +++ Sbjct: 65 ---RRIAHVAAL---FMQQGFVVIA 83 >gi|76363792|ref|XP_888607.1| adenylate kinase [Leishmania major strain Friedlin] gi|12311822|emb|CAC22640.1| putative adenylate kinase [Leishmania major strain Friedlin] Length = 211 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 62/223 (27%), Gaps = 45/223 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 FI G G+GK T+ + L A E R S + + Sbjct: 21 FFIL--GGPGSGKGTNCARLVE-----------DFGYTHFSAGELLREAARSGTGNLAKI 67 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 G + V + I L+ I+ D Y G + Sbjct: 68 GDIIRSGNI-------VPSEITVELLRQAIV--DHPNSVGYVIDGFPRKEDQARM----- 113 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 P + D +R+ +R + E++D E R F + Sbjct: 114 FEEGIAKPAGILYYDCSEATMEERLLSRGTNST-------EKRDDDAAETIRHRFRVNVQ 166 Query: 183 N---------QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 RCH++D+ +V + E+ +K + Sbjct: 167 ECMPVVEAYKANGRCHVIDANRDRDTVYAETKKVFLEMGEKPL 209 >gi|315150358|gb|EFT94374.1| conserved hypothetical protein [Enterococcus faecalis TX0012] Length = 188 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L DE G Sbjct: 28 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 77 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151 >gi|313619918|gb|EFR91475.1| spermidine/putrescine import ATP-binding protein PotA [Listeria innocua FSL S4-378] Length = 95 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|313609966|gb|EFR85346.1| spermidine/putrescine import ATP-binding protein PotA [Listeria monocytogenes FSL F2-208] Length = 94 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|172036900|ref|YP_001803401.1| carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp. ATCC 51142] gi|171698354|gb|ACB51335.1| carbohydrate kinase, thermoresistant glucokinase [Cyanothece sp. ATCC 51142] Length = 184 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 45/196 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT + L + L YD P E + +++ + Sbjct: 18 GVSGSGKTTIGTALNQQLGYAFYDADDFHPP------ENIAKMSQGIPLNDSDRLPWLL- 70 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 +++VI E K + + S Q RD + D + Sbjct: 71 -------AIKSVINENQKEDKNAV----ITCSALKQAYRDLLEQNTTDIIW--------- 110 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L + LKR+Q+R ++F ++++++ + F + +P+ Sbjct: 111 ---IYLKGSYETFLKRLQHRS--------EHFMKENMLMSQ-----FQIL--EEPENAMT 152 Query: 191 VDSAHSFQSVATNILN 206 +D S + + I+N Sbjct: 153 IDVNLSVEEIVQTIIN 168 >gi|172035088|ref|YP_001801589.1| hypothetical protein cce_0171 [Cyanothece sp. ATCC 51142] gi|171696542|gb|ACB49523.1| unknown [Cyanothece sp. ATCC 51142] Length = 509 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 38/180 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I G+ G+GKTT L + + + + R ++A R G Sbjct: 337 HQGKIIMMSGLSGSGKTTMAKYLAQ-----DINAILIR-------SDAVRK---HRGNIP 381 Query: 62 FGAEAEAIVFAAARLD-HVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + +++AA + +I+ EG ++ D +H + Sbjct: 382 LDETGDNELYSAAMNQETYKTLIQLGEMMAKEGFNVILD------------AKFDRHQWR 429 Query: 118 DSLQEISVQ-EVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDV---MIHEK 172 +++ EI+ + + TI P+ I R+ R A + +++ +EK Sbjct: 430 ETVIEIAKKYNIS--LTILYCYAPLKILSDRLSKRQGDISDATPNLLKQQQNNAQDFNEK 487 >gi|116749548|ref|YP_846235.1| cytidylate kinase [Syntrophobacter fumaroxidans MPOB] gi|166199009|sp|A0LK48|KCY_SYNFM RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|116698612|gb|ABK17800.1| cytidylate kinase [Syntrophobacter fumaroxidans MPOB] Length = 225 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 17/28 (60%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL 28 MN+ I+ +G GAGK+T LL + L Sbjct: 1 MNNATIIAIDGPAGAGKSTVSRLLAKEL 28 >gi|189499384|ref|YP_001958854.1| guanylate kinase [Chlorobium phaeobacteroides BS1] gi|189494825|gb|ACE03373.1| Guanylate kinase [Chlorobium phaeobacteroides BS1] Length = 191 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 68/219 (31%), Gaps = 36/219 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G I F G GK+T + ++ + V TR + L + Sbjct: 4 RQGKLIVFSAPSGTGKSTVARKVLERVEGLEFSVSATTRSRREGEVDGKNYYYLTKKAFE 63 Query: 61 EFGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E E F + + A+ GK +L D L Sbjct: 64 EIIDSDGFIEYEHFFGNFYGTLLDKTEAAVASGKHMLFD--------------------L 103 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF-ERKDVMIHEKRRQI 176 D +++++ P+ T++L L L+ ++ R RES D ER E Sbjct: 104 DVKGALNLKKHFPENTLLLFLKP-PSLQELKKRLDGRESEDEDALNERLKRAEFE----- 157 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L A + + + V ++ + + K+ Sbjct: 158 -LSFAHQFDHEVVNDNLSRAVDEVTA----LITDFLSKQ 191 >gi|328771433|gb|EGF81473.1| hypothetical protein BATDEDRAFT_19206 [Batrachochytrium dendrobatidis JAM81] Length = 199 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 9/97 (9%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTR------EPGGTPAAEAARHVLLSCGV 59 I G G+GK+T + L K F ++ + + T E G + R VL + Sbjct: 11 IVLCGPSGSGKSTLLKRLFKEFPEQFGFSISHTSRKPRPGETDGVDYHFSEREVLKTKIS 70 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G E+ F+ ++ L +GK ++ D Sbjct: 71 E--GKFVESAEFSGNIYGTSYQAVQSVLEQGKNVILD 105 >gi|307271249|ref|ZP_07552528.1| hypothetical protein HMPREF9514_00003 [Enterococcus faecalis TX0855] gi|306511998|gb|EFM80989.1| hypothetical protein HMPREF9514_00003 [Enterococcus faecalis TX0855] Length = 188 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT + L + L+ + + + R +L DE G Sbjct: 28 KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 77 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151 >gi|295107241|emb|CBL04784.1| Predicted glutamine amidotransferase [Gordonibacter pamelaeae 7-10-1-b] Length = 723 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 10/79 (12%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAAR 75 GKTT +LL L+ V R G LL ++G VF Sbjct: 62 GKTTVTNLLADALETAGQRVVCNR--TGANLDSGVATALLHAREADWG------VFECDE 113 Query: 76 LDHVENVIRPALMEGKILL 94 L + I P L ++L Sbjct: 114 LWLAK--ILPHLQANYVVL 130 >gi|295425799|ref|ZP_06818480.1| deoxyguanosine kinase [Lactobacillus amylolyticus DSM 11664] gi|295064492|gb|EFG55419.1| deoxyguanosine kinase [Lactobacillus amylolyticus DSM 11664] Length = 228 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 76/228 (33%), Gaps = 43/228 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQ 121 + A + L+ + I+ AL +L DR + + +Q D + +D+ Sbjct: 48 KKYAFLLQVYFLNTRFHSIKEALTADNNVL-DRSIYEDALFFQMNADIGRATQEEVDTYY 106 Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 E+ + E+ PD + +++ D +KR+Q R E D +++ Sbjct: 107 ELLNNMMGELKRMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD---STLEDYYKR 163 Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWEL 211 + + +D + V I+ + + Sbjct: 164 LLSYYKPWYEKYDHSPKMEIDGDKFDFMASEKDREIVLDQIVAKLKSI 211 >gi|300088160|ref|YP_003758682.1| aminoglycoside phosphotransferase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527893|gb|ADJ26361.1| aminoglycoside phosphotransferase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 526 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 76/218 (34%), Gaps = 48/218 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAARHVLLSCG 58 LFI+ G G GK+T L R L ++ +TR EPG TPA+ A L S Sbjct: 341 LFIT-SGPTGCGKSTLAGTLTRHLGLRHISSDITRKKLAGIEPG-TPASAAYTEGLYSP- 397 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYAYQGERDSSQH 114 E A LD E V L G ++ D + D A + S Sbjct: 398 --EMTQRT-----YVAMLDSAEKV----LAGGGSVILDATFLKKTDRDRALGLAKRYSAR 446 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + + L +R++ R + + + +++++R Sbjct: 447 PVIIECR----------------LDEAEARQRLERRATEPGNVSDGCW-----AVYQRQR 485 Query: 175 QIFLDIARNQPD--RCHIVDSAHSFQSVATNILNIVWE 210 + P+ I+D+ H + +I+ I+ E Sbjct: 486 DS-AEPVEELPEGRNHVIIDTRHDPEEAIRDIIAILIE 522 >gi|241760701|ref|ZP_04758793.1| cell division protein FtsY [Neisseria flavescens SK114] gi|241318882|gb|EER55408.1| cell division protein FtsY [Neisseria flavescens SK114] Length = 510 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 317 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 371 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 372 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 422 Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159 MPD ++LD +IG V + E+ L Sbjct: 423 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 456 >gi|228933844|ref|ZP_04096689.1| uridine kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228825800|gb|EEM71588.1| uridine kinase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 157 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 17/88 (19%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-------RQIFLDIARN 183 D TI +D P+DI + R R D+ E IH R+ +L+ Sbjct: 72 DVTIFIDTPLDIAMARRILR---------DFKEDTISEIHNDLEHYINYARKAYLEALHT 122 Query: 184 -QPDRCHIVDSAHSFQSVATNILNIVWE 210 +P+ ++D A S + I ++ Sbjct: 123 VKPNSDIVLDGALSVDQIINQIEEELYR 150 >gi|126460335|ref|YP_001056613.1| GTPase [Pyrobaculum calidifontis JCM 11548] gi|126250056|gb|ABO09147.1| protein of unknown function, ATP binding [Pyrobaculum calidifontis JCM 11548] Length = 249 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 M + FI G G+GK+T +S L +L + YDV Sbjct: 1 MYTVFFI---GTAGSGKSTLVSALYNWLDDQGYDV 32 >gi|46907794|ref|YP_014183.1| dephospho-CoA kinase [Listeria monocytogenes str. 4b F2365] gi|47093100|ref|ZP_00230877.1| dephospho-CoA kinase [Listeria monocytogenes str. 4b H7858] gi|226224164|ref|YP_002758271.1| hypothetical protein Lm4b_01574 [Listeria monocytogenes Clip81459] gi|254824378|ref|ZP_05229379.1| dephospho-CoA kinase [Listeria monocytogenes FSL J1-194] gi|254931503|ref|ZP_05264862.1| dephospho-CoA kinase [Listeria monocytogenes HPB2262] gi|254994375|ref|ZP_05276565.1| hypothetical protein LmonocytoFSL_16390 [Listeria monocytogenes FSL J2-064] gi|255520155|ref|ZP_05387392.1| hypothetical protein LmonocFSL_02787 [Listeria monocytogenes FSL J1-175] gi|51315886|sp|Q71ZA4|COAE_LISMF RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme A kinase gi|46881063|gb|AAT04360.1| dephospho-CoA kinase [Listeria monocytogenes serotype 4b str. F2365] gi|47018540|gb|EAL09296.1| dephospho-CoA kinase [Listeria monocytogenes str. 4b H7858] gi|225876626|emb|CAS05335.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293583055|gb|EFF95087.1| dephospho-CoA kinase [Listeria monocytogenes HPB2262] gi|293593613|gb|EFG01374.1| dephospho-CoA kinase [Listeria monocytogenes FSL J1-194] gi|328465598|gb|EGF36827.1| dephospho-CoA kinase [Listeria monocytogenes 1816] gi|328474916|gb|EGF45716.1| dephospho-CoA kinase [Listeria monocytogenes 220] Length = 200 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 80/216 (37%), Gaps = 32/216 (14%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60 G+ G+ GK+T +++++ L + E G E +LL+ G Sbjct: 6 GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVERGTEGLKEIVAYFGEEILLADGTL 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I + + + + P + + + +RF + + + L Sbjct: 66 NRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFE-------AGEELVFFDIPLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179 E ++ ++ D +++ + LKR+ R +L + L E + + I EK R+ F Sbjct: 119 FESHLESLV-DKIVVVWTTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++D+ S + +L + V+ + Sbjct: 175 ----------VIDNNESLEKTQKQVLTFIKRFVKNK 200 >gi|269961511|ref|ZP_06175874.1| signal recognition particle-docking protein FtsY [Vibrio harveyi 1DA3] gi|269833740|gb|EEZ87836.1| signal recognition particle-docking protein FtsY [Vibrio harveyi 1DA3] Length = 416 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 219 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 274 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 275 TGADSASVIYDAIEAAKARGVDVVIAD 301 >gi|159123809|gb|EDP48928.1| cell cycle checkpoint protein Rad17, putative [Aspergillus fumigatus A1163] Length = 722 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 + G G+GKTT +SLL L +DV R P G+ A Sbjct: 133 KLLVLRGPAGSGKTTTLSLLSDKL---GFDVLEWRNPSGSEFA 172 >gi|70982795|ref|XP_746925.1| cell cycle checkpoint protein Rad17 [Aspergillus fumigatus Af293] gi|66844550|gb|EAL84887.1| cell cycle checkpoint protein Rad17, putative [Aspergillus fumigatus Af293] Length = 722 Score = 39.6 bits (92), Expect = 0.28, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 + G G+GKTT +SLL L +DV R P G+ A Sbjct: 133 KLLVLRGPAGSGKTTTLSLLSDKL---GFDVLEWRNPSGSEFA 172 >gi|308068626|ref|YP_003870231.1| Signal recognition particle protein [Paenibacillus polymyxa E681] gi|305857905|gb|ADM69693.1| Signal recognition particle protein [Paenibacillus polymyxa E681] Length = 458 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 19/128 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67 G++GAGKTT L + LQ++N+ + PAA VL ++ V G + Sbjct: 108 GLQGAGKTTTSGKLAKLLQKQNHRPLLVAGDIYRPAAIKQLQVLGEQINTPVFTLGDQTS 167 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 + A L H ++ ++ D R ++ L++I Sbjct: 168 PVEIAKQGLQHAKD------NGNDYVIID---------TAGRLHVDEELMEELRQIHTN- 211 Query: 128 VMPDCTII 135 V PD ++ Sbjct: 212 VKPDEVLL 219 >gi|302809793|ref|XP_002986589.1| hypothetical protein SELMODRAFT_235054 [Selaginella moellendorffii] gi|300145772|gb|EFJ12446.1| hypothetical protein SELMODRAFT_235054 [Selaginella moellendorffii] Length = 221 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 70/211 (33%), Gaps = 45/211 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + VH+ A + R + S + Sbjct: 34 GGPGSGKGTQCAKIVEKF---GF-VHL-------SAGDLLRAEINSGSANG--------- 73 Query: 71 FAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQG-ERDSSQHLFLDSLQEISVQ 126 +I+ + EGKI+ + + L + A G ++ + + + Sbjct: 74 ----------TMIQNMIQEGKIVPSEVTVKLLQKAMAESGKDKFLIDGFPRNQENRAAFE 123 Query: 127 ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180 + P+ + D P + R+ R R ++ ++ + E + Sbjct: 124 AVTGIEPEFILFFDCPQEEMEVRLLGRNQGRSDDNIETIRKRFKVFVESSLPVVDHY--- 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ + V++A + + V +I + + Sbjct: 181 --DKKGKVRKVNAAKTKEEVFESIETLFQKF 209 >gi|262163696|ref|ZP_06031437.1| signal recognition particle receptor protein FtsY [Vibrio mimicus VM223] gi|262027912|gb|EEY46576.1| signal recognition particle receptor protein FtsY [Vibrio mimicus VM223] Length = 390 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 193 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 248 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 249 TGADSASVIYDAIEAAKARGIDVVIAD 275 >gi|261210150|ref|ZP_05924447.1| signal recognition particle receptor protein FtsY [Vibrio sp. RC341] gi|260840690|gb|EEX67239.1| signal recognition particle receptor protein FtsY [Vibrio sp. RC341] Length = 388 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 191 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 246 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 247 TGADSASVIYDAIEAAKARGIDVVIAD 273 >gi|110643224|ref|YP_670954.1| ATP-binding protein YghS [Escherichia coli 536] gi|110344816|gb|ABG71053.1| hypothetical ATP-binding protein YghS [Escherichia coli 536] Length = 232 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + G +++ + R ++ +G +L+ DR+ Sbjct: 72 KAAHVHDKPSTPPGNITALVIYLLSCWRAYKFHKMLCKN-QQGYLLITDRY 121 >gi|21537248|gb|AAM61589.1| adenylylsulfate kinase-like protein [Arabidopsis thaliana] Length = 305 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 40/151 (26%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G I G+ G+GK++ L R L + +L Sbjct: 102 HKGCVIWITGLSGSGKSSLACALSRALHNRGK-----------------LSYILDGDNVR 144 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G ++ A R +++ V + G I + L S Y Sbjct: 145 HGLNSDLSFEADDRAENIRRVGEVAKLFADSGIICIA--SLISPY--------------- 187 Query: 119 SLQEISVQEVMP--DCT-IILDLPVDIGLKR 146 ++ + + ++P D + +D+P+ + R Sbjct: 188 RIERAACRALLPQGDFIEVFMDVPLHVCEAR 218 >gi|84489410|ref|YP_447642.1| hypothetical protein Msp_0601 [Methanosphaera stadtmanae DSM 3091] gi|84372729|gb|ABC56999.1| partially conserved hypothetical protein, predicted GTPase [Methanosphaera stadtmanae DSM 3091] Length = 550 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 16/131 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +F+ GI G GKTT I+ + +L++ Y T A A L + Sbjct: 354 MFV---GINGTGKTTTIAKIATYLEKHGYSSVF--GASDTFRAGAIEQ--LEHHANNLNL 406 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + + + A GK ++ +D+S R + +D +++I Sbjct: 407 KIIKHERNSDPAAVAFDAVEHAKASGKDVVL---IDTS-----GRMQTNANLMDEMKKI- 457 Query: 125 VQEVMPDCTII 135 + PD I Sbjct: 458 KRVSQPDIVIY 468 >gi|107021861|ref|YP_620188.1| adenylylsulfate kinase [Burkholderia cenocepacia AU 1054] gi|116688809|ref|YP_834432.1| adenylyl-sulfate kinase [Burkholderia cenocepacia HI2424] gi|105892050|gb|ABF75215.1| adenylylsulfate kinase [Burkholderia cenocepacia AU 1054] gi|116646898|gb|ABK07539.1| adenylylsulfate kinase [Burkholderia cenocepacia HI2424] Length = 187 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 21/93 (22%) Query: 6 FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ G+ GAGK+T +LLK L + R LL + G Sbjct: 18 FVVWLTGVSGAGKSTLSNLLKDQLDARG-----------------LRTFLLDGDLLREGL 60 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILL 94 + A R +++ V R + G +++ Sbjct: 61 NQDLGFSDADRHENIRRTAEVARLMVEAGLVVI 93 >gi|195012061|ref|XP_001983455.1| GH15906 [Drosophila grimshawi] gi|193896937|gb|EDV95803.1| GH15906 [Drosophila grimshawi] Length = 229 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 38/197 (19%) Query: 11 GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVL------LSCGVDEF 62 G G+GK+T + L F + + V H TR P + + L+ DEF Sbjct: 40 GPSGSGKSTLLKRLFAEFPEMFGFSVSHTTRRPRDGEEHGIHYYFVSRPDMELAIANDEF 99 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE F+ + +R +G++ + D E+ + + L Sbjct: 100 IETAE---FSGNMYGTSKEAVRDIQSKGRVCILD----------IEQKGVEQIRRTDLNP 146 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM---------IHEKR 173 I + P ++ +R++ R + E + + H+ Sbjct: 147 ILIYNNPP--------SIEELEQRLRKRGTETEESLRKRLNAAKMEIDYGLMPGNFHKIV 198 Query: 174 RQIFLDIARNQPDRCHI 190 +D+A + + Sbjct: 199 HNEDIDVAYEEFRNFVV 215 >gi|167628918|ref|YP_001679417.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase [Heliobacterium modesticaldum Ice1] gi|167591658|gb|ABZ83406.1| sulfate adenylate transferase, large subunit/adenylylsulfate kinase [Heliobacterium modesticaldum Ice1] Length = 624 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 20/89 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +LL++ L + + +L G + Sbjct: 462 FTGLSGSGKSTLANLLEKRLFAEGKHTY-----------------ILDGDNVRHGLNRDL 504 Query: 69 IVFAAARLD---HVENVIRPALMEGKILL 94 A R++ V V + + G I+L Sbjct: 505 GFTEADRVENIRRVAEVAKLMVDAGLIVL 533 >gi|154316853|ref|XP_001557747.1| hypothetical protein BC1G_03844 [Botryotinia fuckeliana B05.10] gi|150845456|gb|EDN20649.1| hypothetical protein BC1G_03844 [Botryotinia fuckeliana B05.10] Length = 216 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 29/175 (16%) Query: 7 ISFEGIEGAGKTTH-ISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF-- 62 I G G GK T LL + H TR P + + + + Sbjct: 11 IIISGPSGVGKGTLYSRLLANHPSLFTTSISHTTRAPRPGEQRDVDYYYVSMEEFEAMIA 70 Query: 63 -GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G E F R +I EGKI++ D + + + Sbjct: 71 AGDFVEHAKFGGNRYGTSRKMIEQKRGEGKIVVLD---------------IEMEGVKQIH 115 Query: 122 EISVQEVMPDCTIIL------DLPV-DIGLKRVQNRYSLRESACLDYFERKDVMI 169 +S P + + DL + KR++ R + +E + E+ + + Sbjct: 116 SLS--PPFPARYVFISPPSTADLSPYQVLEKRLRGRGTEKEESIQKRLEQAKLEL 168 >gi|51598897|ref|YP_073085.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia garinii PBi] gi|219684382|ref|ZP_03539326.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia garinii PBr] gi|219685717|ref|ZP_03540530.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia garinii Far04] gi|81825619|sp|Q660M8|POTA_BORGA RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|51573468|gb|AAU07493.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia garinii PBi] gi|219672371|gb|EED29424.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia garinii PBr] gi|219672767|gb|EED29793.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia garinii Far04] Length = 347 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 FI+ G G GKTT I +L FL +KN +++ Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKNGEIYFFS 68 >gi|78484939|ref|YP_390864.1| dephospho-CoA kinase [Thiomicrospira crunogena XCL-2] gi|109825034|sp|Q31I33|COAE_THICR RecName: Full=Dephospho-CoA kinase; AltName: Full=Dephosphocoenzyme A kinase gi|78363225|gb|ABB41190.1| Dephospho-CoA kinase [Thiomicrospira crunogena XCL-2] Length = 197 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 41/212 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKN----------YDVHVTREPGGTPAAEAARHVLLSCGVD 60 GI G+GKTT +++ + + +V +PG L+ G Sbjct: 9 GI-GSGKTT----VRQLFEDEGVPTLDADQIAREVVAKNQPGLAEIERTFGSDYLTNGEL 63 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I A+ +E ++ P + + + Q + + + Sbjct: 64 NRAKLRELIFNDASAKQALEAILHPLIRQ----------RTEQLIQQLKKQHPPAIVVEI 113 Query: 121 QEISVQEVMPDCT---IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + + P+ I+LDL + LKR R L + ++ + R Sbjct: 114 -PLLTETGKPNYVDEVIVLDLAPETQLKRAITRDQLPAEDI------QKIIQQQATRAER 166 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 L +A I+++ +++ +I +++ Sbjct: 167 LAVAD------IILNTEQPLETLRKDIQSLLH 192 >gi|125983166|ref|XP_001355348.1| GA17539 [Drosophila pseudoobscura pseudoobscura] gi|195169459|ref|XP_002025539.1| GL15252 [Drosophila persimilis] gi|54643662|gb|EAL32405.1| GA17539 [Drosophila pseudoobscura pseudoobscura] gi|194109018|gb|EDW31061.1| GL15252 [Drosophila persimilis] Length = 299 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 11/90 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G+ +GK+T L+ L V++ E P A ++ E Sbjct: 4 VVITGLPASGKSTRARQLQEHLAGLGKKVYLISENEAVPKALFEKNSFFGDSQKEK---- 59 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD 96 R D +R L + +++ D Sbjct: 60 ------VVRSDLKSEALRH-LNKEDVVILD 82 >gi|323340086|ref|ZP_08080351.1| multidrug ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus ruminis ATCC 25644] gi|323092463|gb|EFZ35070.1| multidrug ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus ruminis ATCC 25644] Length = 618 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 15/31 (48%), Positives = 20/31 (64%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKN 32 N G ++ G GAGKTT I+LL+RF + K Sbjct: 393 NPGKMVAIVGPTGAGKTTLINLLERFYEIKG 423 >gi|126732967|ref|ZP_01748728.1| hypothetical protein SSE37_17750 [Sagittula stellata E-37] gi|126706584|gb|EBA05660.1| hypothetical protein SSE37_17750 [Sagittula stellata E-37] Length = 500 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 20/109 (18%) Query: 125 VQEVMPD--CTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK------RRQ 175 PD ++ D+ +I L R + LD F+ V + + Sbjct: 343 TGRPHPDGAVAFLIEDISAEISLTRRFRSELEMTQSVLDRFDDA-VAVFSRLGVLTFTNA 401 Query: 176 IFLDIARNQPDR----CHIVDSAHS------FQSVATNILNIVWELVQK 214 + + PD IVD+ + + I V L ++ Sbjct: 402 AYRERWNCDPDSAFAEITIVDATKDWSSGCLPSPIWSEIREFVLTLRER 450 >gi|329114197|ref|ZP_08242959.1| Adenylate kinase [Acetobacter pomorum DM001] gi|326696273|gb|EGE47952.1| Adenylate kinase [Acetobacter pomorum DM001] Length = 222 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 73/233 (31%), Gaps = 53/233 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I F G GAGK T LL+ +Q D+ G+ + A+ ++ + Sbjct: 3 IIFLGPPGAGKGTQSKLLEERYGLIQISTGDMLRAEVAKGSETGKQAKALM---DAGKLV 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + I +R + + G + D F R +Q LD + + Sbjct: 60 PDELIIAMLKSR------IAQADCQNGF--ILDGF---------PRTLAQAEELDGM--L 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA----------CLD---------YFER 164 S D + LD+ +I R+ R++ +D F+R Sbjct: 101 SSDGKKIDTVLFLDVDEEILADRISGRFTCGNCGKTYNEVSNPPKVDGVCDSCGSHEFKR 160 Query: 165 KDVMIHEKRRQI---FLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208 + E + + + + R H ++ S V I + + Sbjct: 161 RADDKRETVVERLKEYRKLTAPILPFYEKTGRLHKINGMLSAPEVTGEIEDAL 213 >gi|320582191|gb|EFW96409.1| Signal recognition particle (SRP) receptor-alpha subunit [Pichia angusta DL-1] Length = 550 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 21/137 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65 IS G+ G GK+T++S L +L + NY V +T T + A + + + Sbjct: 343 ISVVGVNGVGKSTNLSKLAYWLLQNNYRVLITA--CDTFRSGAVEQLRTHVNNLTKLSPD 400 Query: 66 A-EAIVFAAAR--LDHVENV----IRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFL 117 + +F D V + I+ A I+L D R + + Sbjct: 401 QKQIELFEGGYGGADLVAKIATGAIKYAKQNNFDIVLLD---------TAGRRHNDTQLM 451 Query: 118 DSLQEISVQEVMPDCTI 134 L + PD I Sbjct: 452 APLASFAKAA-NPDKII 467 >gi|148974243|ref|ZP_01811776.1| hypothetical protein VSWAT3_13987 [Vibrionales bacterium SWAT-3] gi|145965940|gb|EDK31188.1| hypothetical protein VSWAT3_13987 [Vibrionales bacterium SWAT-3] Length = 180 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 57/181 (31%), Gaps = 35/181 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ F G G+GKT+ I L+ + Y E R V+ Sbjct: 1 MNN--LTVFTGGPGSGKTSVI----DALKSQGYRCAP----------EVGRKVIQHQVSQ 44 Query: 61 EFGAEAEAIVFAAARLDHVENVI---RPALMEGKILLCDRFLDSSYAYQGERDS-SQHLF 116 + A A R + V + + +++ DR + SY Y Sbjct: 45 QGSALPWLDK-VAFRDEMVREELANYQAFEASEQLVFFDRSIVDSYGYSLLETLPIPECL 103 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L+S E++ I P + + D FE + + +EK + Sbjct: 104 LNSCNELAYNA----KVFIF--PPWE------EIFINDQERKQD-FE-EALATYEKMVEA 149 Query: 177 F 177 + Sbjct: 150 Y 150 >gi|15611628|ref|NP_223279.1| adenylate kinase [Helicobacter pylori J99] gi|8134509|sp|Q9ZLL8|KAD_HELPJ RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|4155112|gb|AAD06144.1| ADENYLATE KINASE [Helicobacter pylori J99] Length = 191 Score = 39.6 bits (92), Expect = 0.29, Method: Composition-based stats. Identities = 39/219 (17%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D + + H + R +FL Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + I++ S + + + + Sbjct: 151 DPLVEIQNFYKAKHLHKIINGERSIEEIVNEMQKYILSF 189 >gi|295100412|emb|CBK97957.1| cobalamin biosynthesis protein CbiD [Faecalibacterium prausnitzii L2-6] Length = 645 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 1/73 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDE 61 G ++ G GAGK+T + L L + V + ++ E AR + L Sbjct: 32 KGTILTLIGPNGAGKSTLLKTLAAQLAPQGGAVLLDGKDLADCSGTERARKMALMVPHTR 91 Query: 62 FGAEAEAIVFAAA 74 A+A Sbjct: 92 RTELTTCFEMASA 104 >gi|285019058|ref|YP_003376769.1| sulfate adenylyltransferase, ATP sulfurylase [Xanthomonas albilineans GPE PC73] gi|283474276|emb|CBA16777.1| putative sulfate adenylyltransferase, atp sulfurylase protein [Xanthomonas albilineans] Length = 638 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L + LL G + Sbjct: 473 FTGLSGAGKSTIANLVEKRLHAQGRHTF-----------------LLDGDNVRHGLNRDL 515 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R + G I+L ++ + + + + Sbjct: 516 GFTDEDRVENIRRVAEVARLMIDAGLIVL--------VSFISPFRAEREMARA---RFAP 564 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E + + +D+P+ + R Sbjct: 565 GEFVE---VFVDVPLQVAEAR 582 >gi|300770707|ref|ZP_07080586.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33861] gi|300763183|gb|EFK60000.1| guanylate kinase [Sphingobacterium spiritivorum ATCC 33861] Length = 190 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 31/170 (18%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVD 60 G I F GAGKTT + L K TREP G + + Sbjct: 2 KGKLIIFSAPSGAGKTTIVRHLLNKYPDKIEFSISASTREPRGEEVDGKDYYFISKDEFL 61 Query: 61 EFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A+ E I V++ + + + +GK ++ D Sbjct: 62 HKIAKQEFIEFEEVYSGTFYGTLRSEVERIWEKGKHVIFD-------------------- 101 Query: 117 LDSLQEISVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 +D + + ++ PD +I + P ++ R++ R + E + F Sbjct: 102 IDVVGGLRLRSKFPDQALSIFVQ-PPSLEVLKDRLRGRGTDSEDKLKERF 150 >gi|255070079|ref|XP_002507121.1| deoxynucleoside kinase family [Micromonas sp. RCC299] gi|226522396|gb|ACO68379.1| deoxynucleoside kinase family [Micromonas sp. RCC299] Length = 446 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 39/177 (22%) Query: 9 FEGIEGAGKTTHISLLKR---FLQRKNYDVHV--------TREPGGTPAAEAARHVL--- 54 EG GAGK+T +S + + L+ + + R G +A A ++L Sbjct: 148 VEGNIGAGKSTFLSSIIKGSTLLEDLGTSIVLEPVEKWQQVRNRGEQVSAFEAHNILNEF 207 Query: 55 -LSCGVDEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ 106 + + + ++ A R V + R +L DR F++S Y Sbjct: 208 YKNPTRFAYTFQHHVFMTRLLLEAETRSGSVRIMERS-------ILSDRMIFVESVY--- 257 Query: 107 GERDSSQHLFLDSLQEI------SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 E+ L ++PD I L ++ LKR++ R E+ Sbjct: 258 -EKGWLSDLEFSLFNSWYEPVVKVSPHLIPDAFIYLRTTPEVCLKRLKRRARGEETE 313 >gi|1170606|sp|P43188|KADC_MAIZE RecName: Full=Adenylate kinase, chloroplastic; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|3114421|pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a) gi|3114422|pdb|1ZAK|B Chain B, Adenylate Kinase From Maize In Complex With The Inhibitor P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a) Length = 222 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 63/238 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G +GK T L+K Q + + R + + + A+ Sbjct: 10 ISGAPASGKGTQCELIKTKYQLAHISA-----------GDLLRAEIAAGSENGKRAKE-- 56 Query: 69 IVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + V + I +P E L D + S SQ + L+ Sbjct: 57 ---FMEKGQLVPDEIVVNMVKERLRQPDAQENGW-LLDGYPRSY---------SQAMALE 103 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFER 164 +L+ + PD I+LD+P ++ ++RV R + Sbjct: 104 TLE------IRPDTFILLDVPDELLVERVVGRRLDPVTGKIYHLKYSPPENEEIASRLTQ 157 Query: 165 KDVMIHEKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + EK Q + + V + +V I ++ +++K+ Sbjct: 158 RFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKK 215 >gi|315282486|ref|ZP_07870890.1| dephospho-CoA kinase [Listeria marthii FSL S4-120] gi|313613870|gb|EFR87610.1| dephospho-CoA kinase [Listeria marthii FSL S4-120] Length = 200 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 81/216 (37%), Gaps = 32/216 (14%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60 G+ G+ GK+T +++++ L + EPG AE +LL+ G Sbjct: 6 GLTGSVATGKSTVSNMIQQAGIPLVDADVAARKVVEPGTDGLAEIVAYFGEEILLADGTL 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A I A+ + + + P + + +L +R Y + + L Sbjct: 66 NRPKLAGIIFKDKAKREKLNEITHPRVKD--YMLSER-----ERYFEAGEEIVFFDIPLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179 E ++ ++ D +++ + L R+ R L + L + + I EK R+ F Sbjct: 119 FESHLESLV-DQIVVVWTTPETELNRLMERNDLTKEDALARINSQ-MGIDEKARKADF-- 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++D+ S ++ +L + V+ + Sbjct: 175 ----------VIDNNTSLENTQKQVLTFIERFVKNK 200 >gi|298250431|ref|ZP_06974235.1| ABC transporter related protein [Ktedonobacter racemifer DSM 44963] gi|297548435|gb|EFH82302.1| ABC transporter related protein [Ktedonobacter racemifer DSM 44963] Length = 458 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP 45 + +G FI+ G G+GK+T + +L L + +V P P Sbjct: 43 IRAGEFIALLGPSGSGKSTLLRILAGLLNPSSGEVLFKGVPQYGP 87 >gi|261839555|gb|ACX99320.1| adenylate kinase [Helicobacter pylori 52] Length = 191 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ + LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTKRGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ + I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSTQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V + + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189 >gi|282599235|ref|YP_003358547.1| hypothetical protein [Shigella phage phiSboM-AG3] gi|226973541|gb|ACO94294.1| conserved hypothetical phage protein [Shigella phage phiSboM-AG3] Length = 220 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 37/173 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK+T S L + + +T P S GVD Sbjct: 37 GSNGSGKSTVPSQLAERDPQAYVVTHDGKIMLTVCPSFNVVCIGKYDKSKSKGVDSLKD- 95 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++FA + D E + + EG I S+ L Sbjct: 96 TEQMLFALSIADLPEYQVYDVIFEGII-------PSTL----------------LSSWIP 132 Query: 126 QEVMP--DCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + P + ++ D P++ + RV++R + D+ E V E+ + Sbjct: 133 RLTRPPRELVVLFMDTPLETCIARVKSR-----NGGADFNESLVVEKWERVQD 180 >gi|55959191|emb|CAI15061.1| guanylate kinase 1 [Homo sapiens] Length = 218 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 22 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 68 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G D + E + R + I A G + + S A Q + ++ Sbjct: 69 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYF 162 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRL 170 >gi|55959194|emb|CAI15064.1| guanylate kinase 1 [Homo sapiens] Length = 253 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 67 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 113 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G D + E + R + I A G + + S A Q + ++ Sbjct: 114 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 164 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYF 162 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 165 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRL 215 >gi|156972913|ref|YP_001443820.1| ATPase [Vibrio harveyi ATCC BAA-1116] gi|156524507|gb|ABU69593.1| hypothetical protein VIBHAR_00591 [Vibrio harveyi ATCC BAA-1116] Length = 196 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 23/109 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDE 61 I G GAGKTT ++ L E G AE +R ++ L GV Sbjct: 16 IVITGGPGAGKTTLLNALG--------------ELGYATFAEGSRTLIEQQSQLDNGVLP 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + E FA L+ + + AL +++ DR + AY Sbjct: 62 WTNLPE---FANLCLELMGKQKQDAL-SHEVVFVDRAIPDIVAYLKVGG 106 >gi|52142234|ref|YP_084595.1| cobalt ABC transporter ATP-binding protein [Bacillus cereus E33L] gi|51975703|gb|AAU17253.1| ABC transporter, ATP-binding protein; possible cobalt transport ATP-binding protein [Bacillus cereus E33L] Length = 553 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 12/89 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGV 59 + G FI+ G G+GKTT + K+ L P GT + E VLL Sbjct: 31 IQKGEFITLAGGSGSGKTTLLKHFKKELL-----------PIGTRSGEIFYDDVLLEEVP 79 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALM 88 D A+ +VF V + + L Sbjct: 80 DLLSAQEIGMVFQNPENQLVMDTVIQELA 108 >gi|56750655|ref|YP_171356.1| shikimate kinase [Synechococcus elongatus PCC 6301] gi|81299703|ref|YP_399911.1| shikimate kinase [Synechococcus elongatus PCC 7942] gi|81596488|sp|Q5N4D3|AROK_SYNP6 RecName: Full=Shikimate kinase; Short=SK gi|116257513|sp|Q31PU5|AROK_SYNE7 RecName: Full=Shikimate kinase; Short=SK gi|56685614|dbj|BAD78836.1| shikimate kinase [Synechococcus elongatus PCC 6301] gi|81168584|gb|ABB56924.1| shikimate kinase [Synechococcus elongatus PCC 7942] Length = 190 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 48/212 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LF+ G+ G+GKTT LL L Y T + + S G Sbjct: 12 LFLV--GLMGSGKTTIGKLLAESL---GYTYVDTDSLIENVTGRSIPEIFASDGE----- 61 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A V+ ++++ G + LQ+ Sbjct: 62 --------AGFRQIETQVLEEVASYRRLVVAT----------GGGIVIRPENWSYLQQG- 102 Query: 125 VQEVMPDCTIILDLPVDIGLKRV---QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 I LD+P+ L+R+ QNR L+ A + + E+RR + Sbjct: 103 -------LVIWLDVPIPELLRRLEGDQNRPLLQTEAPATTLQ----ALWEQRRDRY---- 147 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 R ++++ + IL ++ +++ Sbjct: 148 AQADLRIA-IEASEDPEVTMQRILEVIPSVLK 178 >gi|327483045|gb|AEA77452.1| Signal recognition particle receptor protein FtsY [Vibrio cholerae LMA3894-4] Length = 390 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 193 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 248 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 249 TGADSASVIYDAIEAAKARGIDVVIAD 275 >gi|303241509|ref|ZP_07328010.1| signal recognition particle protein [Acetivibrio cellulolyticus CD2] gi|302590927|gb|EFL60674.1| signal recognition particle protein [Acetivibrio cellulolyticus CD2] Length = 450 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 20/153 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL---LSCGVDEFGAEAE 67 G++G+GKTT L L+++ + + PAA V+ L V G + Sbjct: 108 GLQGSGKTTTSGKLANLLRKQGKNPLLVACDVYRPAAIKQLQVVGGQLGVDVFSMGDQTN 167 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 + A A ++H + + + +++ D R +D L+ I Sbjct: 168 PVDIAKAAVEHAK------IKQYDLVIID---------TAGRLHIDEKLMDELKNI-KDT 211 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 V P I+L + G V + E +D Sbjct: 212 VRPH-EILLVVDSMTGQDAVNVSETFNEKLGVD 243 >gi|262172903|ref|ZP_06040581.1| signal recognition particle receptor protein FtsY [Vibrio mimicus MB-451] gi|261893979|gb|EEY39965.1| signal recognition particle receptor protein FtsY [Vibrio mimicus MB-451] Length = 392 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 195 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 250 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 251 TGADSASVIYDAIEAAKARGIDVVIAD 277 >gi|258625089|ref|ZP_05720008.1| signal recognition particle-docking protein FtsY [Vibrio mimicus VM603] gi|258582640|gb|EEW07470.1| signal recognition particle-docking protein FtsY [Vibrio mimicus VM603] Length = 400 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 203 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 258 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 259 TGADSASVIYDAIEAAKARGIDVVIAD 285 >gi|210622384|ref|ZP_03293137.1| hypothetical protein CLOHIR_01085 [Clostridium hiranonis DSM 13275] gi|210154266|gb|EEA85272.1| hypothetical protein CLOHIR_01085 [Clostridium hiranonis DSM 13275] Length = 207 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 42/216 (19%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 MN G+ G GAGK T L + + V TR P E + + Sbjct: 1 MNRKGILTVVSGPSGAGKGTICKELLKNNENIKLSVSATTRAPREGE-KEGVNYYYKTHE 59 Query: 59 VDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + E + A R + I L +G+ +L Sbjct: 60 EFKKMIEEGDLFEYAERYGNFYGTPKAAIMENLEKGQDVL-------------------- 99 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L ++ + ++V+++ PD +I LP + +R+ R + E F Sbjct: 100 LEIEMIGALNVKKMCPDSVLIFVLPPSLEELKRRLVGRGTETEEQIEKRFSM-------- 151 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + +I + I++ ++ A +I +I+ Sbjct: 152 ---AYEEIQTLKEYDYFIIN--EDVETAAKDIESII 182 >gi|171184673|ref|YP_001793592.1| ABC transporter related [Thermoproteus neutrophilus V24Sta] gi|170933885|gb|ACB39146.1| ABC transporter related [Thermoproteus neutrophilus V24Sta] Length = 244 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G F++ G G GK+T + +L L+R + V R G P E R + L Sbjct: 28 KGEFVALLGPSGCGKSTLLRMLAG-LERPDAGVVKFR---GEPIREPRREIALMFQFPNL 83 Query: 63 GAEAEAI 69 A+ Sbjct: 84 LPWKTAL 90 >gi|153824163|ref|ZP_01976830.1| signal recognition particle-docking protein FtsY [Vibrio cholerae B33] gi|126518315|gb|EAZ75540.1| signal recognition particle-docking protein FtsY [Vibrio cholerae B33] Length = 303 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 106 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 161 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 162 TGADSASVIYDAIEAAKARGIDVVIAD 188 >gi|254226613|ref|ZP_04920194.1| signal recognition particle-docking protein FtsY [Vibrio cholerae V51] gi|125620885|gb|EAZ49238.1| signal recognition particle-docking protein FtsY [Vibrio cholerae V51] Length = 393 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 196 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 251 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 252 TGADSASVIYDAIEAAKARGMDVVIAD 278 >gi|317500461|ref|ZP_07958685.1| guanylate kinase [Lachnospiraceae bacterium 8_1_57FAA] gi|331089438|ref|ZP_08338337.1| guanylate kinase [Lachnospiraceae bacterium 3_1_46FAA] gi|316898216|gb|EFV20263.1| guanylate kinase [Lachnospiraceae bacterium 8_1_57FAA] gi|330404806|gb|EGG84344.1| guanylate kinase [Lachnospiraceae bacterium 3_1_46FAA] Length = 211 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 55/171 (32%), Gaps = 28/171 (16%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSC 57 MN G+ I G G+GK T + L TR+P + Sbjct: 1 MNRKGILIVVSGFSGSGKGTLMKELLSRYPDTYALSVSATTRQPRDGEQDGREYFFISKD 60 Query: 58 GVDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 ++ A+ E I +A ++ + +R L GK ++ + QG + Sbjct: 61 EFEKMIAKDELIEYARYVKNYYGTPKEYVRKQLDAGKDVILE------IEIQGALKVKEE 114 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 PD ++ P G ++ R R + +D E + Sbjct: 115 F--------------PDTLLLFVTPPSAGE--LKKRLVGRGTETMDVIESR 149 >gi|258622824|ref|ZP_05717841.1| signal recognition particle-docking protein FtsY [Vibrio mimicus VM573] gi|258584885|gb|EEW09617.1| signal recognition particle-docking protein FtsY [Vibrio mimicus VM573] Length = 398 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 201 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 256 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 257 TGADSASVIYDAIEAAKARGIDVVIAD 283 >gi|119484048|ref|XP_001261927.1| cell cycle checkpoint protein rad17 [Neosartorya fischeri NRRL 181] gi|119410083|gb|EAW20030.1| cell cycle checkpoint protein rad17 [Neosartorya fischeri NRRL 181] Length = 858 Score = 39.6 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 + G G+GKTT +SLL L +DV R P G+ A Sbjct: 271 KLLVLRGPAGSGKTTTLSLLSDKL---GFDVLEWRNPSGSEFA 310 >gi|315646173|ref|ZP_07899293.1| guanylate kinase [Paenibacillus vortex V453] gi|315278372|gb|EFU41688.1| guanylate kinase [Paenibacillus vortex V453] Length = 190 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 17/38 (44%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M+ GL I G G GK T + L+ + Y V T Sbjct: 1 MSKGLLIVLSGPSGVGKGTVCTALRSRVPELVYSVSAT 38 >gi|302385376|ref|YP_003821198.1| protein of unknown function DUF344 [Clostridium saccharolyticum WM1] gi|302196004|gb|ADL03575.1| protein of unknown function DUF344 [Clostridium saccharolyticum WM1] Length = 499 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 19/30 (63%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 I FEG+ +GK T I+ L + L + +DV+ Sbjct: 43 IVFEGMGASGKGTQINRLIQALDPRGFDVY 72 Score = 35.4 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 16/35 (45%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43 FEG + AGK I L L + Y V+ T P Sbjct: 303 FEGWDAAGKGGAIKRLTSHLDPRGYKVYPTSAPND 337 >gi|295402716|ref|ZP_06812658.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93] gi|294975247|gb|EFG50883.1| deoxynucleoside kinase [Geobacillus thermoglucosidasius C56-YS93] Length = 222 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 67/226 (29%), Gaps = 46/226 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + T + + L +F + Sbjct: 15 ITIAGTVGVGKSTMTKALAKALNFR------------TSLEKVDTNPYLDKFYADFERWS 62 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123 + F A R + G + DR + A+ + ++ + ++ E Sbjct: 63 FHLQIYFLAERF----KEQKRMFEYGGGFVQDRSIYED-AHIFAKMHFENGTMTAVDYET 117 Query: 124 SVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 PD I L+ + +KR++ R E + V ++ Sbjct: 118 YTSLFQAMVMTPYFPHPDLLIYLEGSFEEVIKRIRERGRPMEQ-------KTPVSYWKEM 170 Query: 174 RQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWE 210 + + + I++ S + + I+ E Sbjct: 171 YERYEKWINEFNACPVLRVNINEYDIIEDEQSIEPIIKKAATIIHE 216 >gi|262404882|ref|ZP_06081436.1| signal recognition particle receptor protein FtsY [Vibrio sp. RC586] gi|262348966|gb|EEY98105.1| signal recognition particle receptor protein FtsY [Vibrio sp. RC586] Length = 399 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 202 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 257 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 258 TGADSASVIYDAIEAAKARGIDVVIAD 284 >gi|229515823|ref|ZP_04405281.1| signal recognition particle receptor protein FtsY [Vibrio cholerae TMA 21] gi|229347086|gb|EEO12047.1| signal recognition particle receptor protein FtsY [Vibrio cholerae TMA 21] Length = 391 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 194 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 249 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 250 TGADSASVIYDAIEAAKARGIDVVIAD 276 >gi|229520064|ref|ZP_04409492.1| signal recognition particle receptor protein FtsY [Vibrio cholerae TM 11079-80] gi|229342852|gb|EEO07842.1| signal recognition particle receptor protein FtsY [Vibrio cholerae TM 11079-80] Length = 395 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 198 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 253 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 254 TGADSASVIYDAIEAAKARGIDVVIAD 280 >gi|229525040|ref|ZP_04414445.1| signal recognition particle receptor protein FtsY [Vibrio cholerae bv. albensis VL426] gi|229338621|gb|EEO03638.1| signal recognition particle receptor protein FtsY [Vibrio cholerae bv. albensis VL426] Length = 401 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 204 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 259 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 260 TGADSASVIYDAIEAAKARGIDVVIAD 286 >gi|261405794|ref|YP_003242035.1| guanylate kinase [Paenibacillus sp. Y412MC10] gi|329926588|ref|ZP_08281001.1| guanylate kinase [Paenibacillus sp. HGF5] gi|261282257|gb|ACX64228.1| guanylate kinase [Paenibacillus sp. Y412MC10] gi|328939129|gb|EGG35492.1| guanylate kinase [Paenibacillus sp. HGF5] Length = 190 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 17/38 (44%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M+ GL I G G GK T + L+ + Y V T Sbjct: 1 MSKGLLIVLSGPSGVGKGTVCTALRSRVPELVYSVSAT 38 >gi|218438870|ref|YP_002377199.1| shikimate kinase [Cyanothece sp. PCC 7424] gi|218171598|gb|ACK70331.1| Shikimate kinase [Cyanothece sp. PCC 7424] Length = 184 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 72/219 (32%), Gaps = 48/219 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVD 60 GL I G+ G GKTT L L + +D V + + + + + + G D Sbjct: 6 KGLSIFLVGLPGTGKTTVGQGLAEQLDYRFFDSDVVIKK-----VTGQTIKEIFATQGED 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + V+R + S A + + L + Sbjct: 61 FF-------------RELESQVLRELCA---------YTRSVIA------TGGGIILKQI 92 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----DYFE-RKDVMIHEKRR 174 ++ I LD PVD+ ++R+ + + + D E R+ + +R Sbjct: 93 NWSYLRHG---LIIWLDAPVDLLIQRLADDSNRDDPNRPLLQVDDLDELRQKLEFLLSQR 149 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQ 213 Q + R + S + + + I+ + ++ Sbjct: 150 Q---SLYAEADLRIA-ITSEQTPDDIVSQIVTQIPTVLN 184 >gi|169158656|emb|CAQ14201.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Danio rerio] Length = 340 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 71/250 (28%), Gaps = 47/250 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------------ 52 IS +G +GK L L + EP + + Sbjct: 58 KIISIDGNLASGKGVLAQELAEKL-----GMLYMPEPDTHYVDKMTKEKVPLDQAFNGNC 112 Query: 53 ----VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105 L + + RL + + L G+ ++ +R S + Sbjct: 113 SLEKFYLEPKASDGNSYRLQAWMYLMRLLQYSDAVEHLLTTGQGVILERSPFSDVVFLEA 172 Query: 106 QGERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + + ++ EI + + P I +D P + K+++ Y Sbjct: 173 MFKEGYIRKQCVNHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKASGKP-------Y 225 Query: 162 FERKDVMIHEKRRQIFLDI----ARNQPD--RCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + + + + V++ + V +I E ++ + Sbjct: 226 LQNVPLSYLKSIETAYKKTFLPKISEEAEVLTYGAVEA-QDVEKVVEDI-----ECLKFQ 279 Query: 216 VSPLSSKKDI 225 P ++ D+ Sbjct: 280 KGPWVNQNDV 289 >gi|153803614|ref|ZP_01958200.1| signal recognition particle-docking protein FtsY [Vibrio cholerae MZO-3] gi|124120853|gb|EAY39596.1| signal recognition particle-docking protein FtsY [Vibrio cholerae MZO-3] Length = 391 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 194 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 249 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 250 TGADSASVIYDAIEAAKARGIDVVIAD 276 >gi|48734808|gb|AAH71334.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Danio rerio] Length = 355 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 71/250 (28%), Gaps = 47/250 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------------ 52 IS +G +GK L L + EP + + Sbjct: 58 KIISIDGNLASGKGVLAQELAEKL-----GMLYMPEPDTHYVDKMTKEKVPLDQAFNGNC 112 Query: 53 ----VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105 L + + RL + + L G+ ++ +R S + Sbjct: 113 SLEKFYLEPKASDGNSYRLQAWMYLMRLLQYSDAVEHLLTTGQGVILERSPFSDVVFLEA 172 Query: 106 QGERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + + ++ EI + + P I +D P + K+++ Y Sbjct: 173 MFKEGYIRKQCVNHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKASGKP-------Y 225 Query: 162 FERKDVMIHEKRRQIFLDI----ARNQPD--RCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + + + + V++ + V +I E ++ + Sbjct: 226 LQNVPLSYLKSIETAYKKTFLPKISEEAEVLTYGAVEA-QDVEKVVEDI-----ECLKFQ 279 Query: 216 VSPLSSKKDI 225 P ++ D+ Sbjct: 280 KGPWVNQNDV 289 >gi|41152448|ref|NP_955872.1| NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Danio rerio] gi|37589758|gb|AAH59660.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10 [Danio rerio] Length = 355 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 30/250 (12%), Positives = 71/250 (28%), Gaps = 47/250 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH------------ 52 IS +G +GK L L + EP + + Sbjct: 58 KIISIDGNLASGKGVLAQELAEKL-----GMLYMPEPDTHYVDKMTKEKVPLDQAFNGNC 112 Query: 53 ----VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--- 105 L + + RL + + L G+ ++ +R S + Sbjct: 113 SLEKFYLEPKASDGNSYRLQAWMYLMRLLQYSDAVEHLLTTGQGVILERSPFSDVVFLEA 172 Query: 106 QGERDSSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 + + ++ EI + + P I +D P + K+++ Y Sbjct: 173 MFKEGYIRKQCVNHYNEIKGISICEFLPPHLVIYVDSPAEEVQKKLKASGKP-------Y 225 Query: 162 FERKDVMIHEKRRQIFLDI----ARNQPD--RCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + + + + + V++ + V +I E ++ + Sbjct: 226 LQNVPLSYLKSIETAYKKTFLPKISEEAEVLTYGAVEA-QDVEKVVEDI-----ECLKFQ 279 Query: 216 VSPLSSKKDI 225 P ++ D+ Sbjct: 280 KGPWVNQNDV 289 >gi|330508423|ref|YP_004384851.1| signal recognition particle-docking protein FtsY [Methanosaeta concilii GP-6] gi|328929231|gb|AEB69033.1| signal recognition particle-docking protein FtsY [Methanosaeta concilii GP-6] Length = 388 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 15/132 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ + ++L ++Y V + G T A A L + G + Sbjct: 192 ILFVGVNGTGKTTSIAKVAKYLMDQSYSVVLAA--GDTFRAGAIEQ--LEVHGNNLGLKV 247 Query: 67 EAIVFAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + I A K ++L D R + +D +++I Sbjct: 248 VKHKTGGDPAAVIFDAIEYARAHNKDVVLAD---------TAGRLHTNINLMDQMRKIV- 297 Query: 126 QEVMPDCTIILD 137 + PD I +D Sbjct: 298 RVTTPDLLIFVD 309 >gi|327441088|dbj|BAK17453.1| signal recognition particle GTPase [Solibacillus silvestris StLB046] Length = 414 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I L L+ + V + G T A A L D G E Sbjct: 204 ILFVGVNGVGKTTTIGKLAHRLKSEGKSVMLAA--GDTFRAGAIEQ--LQVWGDRVGVEV 259 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCD 96 A + + + IR A G IL+CD Sbjct: 260 IAQSEGSDPAAVMYDAIRAAKNRGVDILICD 290 >gi|307318707|ref|ZP_07598140.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306895734|gb|EFN26487.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] Length = 169 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 40/204 (19%), Positives = 72/204 (35%), Gaps = 47/204 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64 EG G GKT+ + L+R+ Y V V G +A L+ + Sbjct: 8 IEGGSGTGKTS----VATELERRGYHVVHGDRVLAYVGDPETGQA-----LAGPPEGADR 58 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 R+D V A+ +++ G R+ + L L Sbjct: 59 IVWGYAHWIWRVDKVR-----AIAADTT------HPATFFCGGSRNFHKFLDLF------ 101 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 D +LD+ V+ +R+ R + ER V+ + + R+ +L Sbjct: 102 ------DKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRYHRTRE-YL------ 145 Query: 185 PDRCHIVDSAHSFQSVATNILNIV 208 P + +D+A++ SV +IL + Sbjct: 146 PAGIN-IDTAYTVPSVVDDILAKL 168 >gi|190571084|ref|YP_001975442.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019604|ref|ZP_03335410.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357356|emb|CAQ54787.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995026|gb|EEB55668.1| guanylate kinase [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 202 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 76/230 (33%), Gaps = 38/230 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 N G+ + GAGKTT L V TR+P + Sbjct: 5 NEGILLILSSPSGAGKTTISEKLLEQSTDLVMSVSMTTRKPRPGEVNGKDYFFVTEEKFH 64 Query: 61 EFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E + + +A + ++ I L G +L + +QG Sbjct: 65 ELCKAGQMLEYAKVFENFYGIPKDFIEQNLSSGISVLL------NIDWQGAFH-----LF 113 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + L+E V IL P + R+Q R S E + I + + Sbjct: 114 EILREKVVS------VFIL--PPSMEELRLRLQRRNSDDE-----------IEIERRLAE 154 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKDI 225 +I+++ I++ + I +I+ + + K++ SS KD+ Sbjct: 155 AQKEISKSNKYDYVIIN--DNLDKSVEEIKSILSKGMLKKLEEKSSLKDL 202 >gi|58221319|gb|AAW68302.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 140 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++A Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQA-- 107 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|6093523|sp|O07309|NODQ_RHISB RecName: Full=Bifunctional enzyme nodQ; AltName: Full=Nodulation protein Q; Includes: RecName: Full=Sulfate adenylyltransferase subunit 1; AltName: Full=ATP-sulfurylase large subunit; AltName: Full=Sulfate adenylate transferase; Short=SAT; Includes: RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase gi|2148989|gb|AAB95249.1| NodQ [Rhizobium sp. BR816] Length = 633 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + L R L + + +L G + Sbjct: 465 FTGLSGSGKSTIANALDRLLHARGKHTY-----------------MLDGDNVRHGLNRDL 507 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++ V V + G I+L S + ++ + I Sbjct: 508 GFTEADRVENIRRVAEVAKLMADAGLIVLV-----SFISPFRGERRMARELMEEGEFIE- 561 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 I +D P++ +R Sbjct: 562 --------IFVDTPLEECARR 574 >gi|86141859|ref|ZP_01060383.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Leeuwenhoekiella blandensis MED217] gi|85831422|gb|EAQ49878.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Leeuwenhoekiella blandensis MED217] Length = 204 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 40/200 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS---CGVDEFG 63 I+ G GAGKTT LL + + + L ++ + Sbjct: 3 IAIAGNIGAGKTTLTKLLAKH------------YNWQPQFEDVVDNPYLDDFYNEMERWS 50 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQ 113 + + +E GK ++ DR + D+ + RD Sbjct: 51 FNLQVYFLNSRFRQLLE-----IQESGKDIIQDRTIYEDAHIFAPNLHAMGLLTNRDFHN 105 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 + L L E VQ PD I L + + ++ R E++ + + Sbjct: 106 YASLFELMESVVQG--PDLLIYLRSSIPNLVAQIHKRGREYENSI-------SIDYLSRL 156 Query: 174 RQIFLDIARN-QPDRCHIVD 192 + + + I+D Sbjct: 157 NERYEAWIHDYNKGNLLIID 176 >gi|302829715|ref|XP_002946424.1| adenylate kinase [Volvox carteri f. nagariensis] gi|300268170|gb|EFJ52351.1| adenylate kinase [Volvox carteri f. nagariensis] Length = 205 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 26/224 (11%), Positives = 66/224 (29%), Gaps = 55/224 (24%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGV 59 F+ G G+GK T L+ + T + G P + + ++L + Sbjct: 21 FVV--GGPGSGKGTQCDLIS---RDFGVPFFSTGDLIRSLIASGCPEGKQLQDIILQGQI 75 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHLF 116 ++ A A +L D R ++ +Q + Sbjct: 76 IP-SEVTVGLLQKAM-----------ASATSDTVLIDGFPRNTENRTVWQSQVGYDCE-- 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---R 173 ++ D P ++ ++R++ R R + +++ + Sbjct: 122 ---------------LVLLFDCPEEVMVERLRRRAEGRADDNEETIKKRVQNFKSQMAPV 166 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 + I + + + +I + + L ++R + Sbjct: 167 LDYYRAI-----GKVTTISTDRPVD----DIYSELSSLWRQRFA 201 >gi|295696036|ref|YP_003589274.1| guanylate kinase [Bacillus tusciae DSM 2912] gi|295411638|gb|ADG06130.1| guanylate kinase [Bacillus tusciae DSM 2912] Length = 227 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41 GL + G GAGK T + L+ L Y V TR P Sbjct: 12 GLLVVLSGPSGAGKGTVCTALREHLPAMKYSVSVTTRLP 50 >gi|169825243|ref|YP_001692854.1| hypothetical protein FMG_1546 [Finegoldia magna ATCC 29328] gi|167832048|dbj|BAG08964.1| conserved hypothetical protein [Finegoldia magna ATCC 29328] Length = 287 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 85/235 (36%), Gaps = 35/235 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ + + ++ AGK + + + L V ++P E H L Sbjct: 56 KKGILVVLQAMDAAGKDSLVKKVFTALNPAGCKVTSFKQPST----EELDHDYLWRITKA 111 Query: 62 FGAEAEAIVFAAARLD-----HVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHL 115 A E +F + + V N++ + D RF D + A++ D++ Sbjct: 112 TPAYGEVGIFNRSHYEDVLVTRVHNLVNKKNDDDFW---DKRFEDIN-AFEKYLDNNGIK 167 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHE 171 + L + D +R+ +R +L E A D ER++ + Sbjct: 168 VVK---------------FFLHVSKDEQKERLLDRINLEEKHWKFAASDILERENWDDYH 212 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQS--VATNILNIVWELVQKRVSPLSSKKD 224 + + L+ ++V + + + + V + ++ +++ + LS K++ Sbjct: 213 RAYEDMLEHTSTDYAPWYVVPADNKWYTRLVVSEVMLDLFKQLDPHTPKLSEKEE 267 >gi|157364479|ref|YP_001471246.1| guanylate kinase [Thermotoga lettingae TMO] gi|157315083|gb|ABV34182.1| Guanylate kinase [Thermotoga lettingae TMO] Length = 208 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 52/175 (29%), Gaps = 28/175 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G+ G G GKT+ I L + ++ + V TR + + Sbjct: 2 KGVLYVVSGPSGVGKTSIIELTLKKVKNIVFSVSCTTRPKRPGEIDGKDYFFVSEPSFMK 61 Query: 62 FGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + +A + ++ + L GK +L D QG + Sbjct: 62 MVENGEFLEWAVVHSYYYGTLKKFVEEQLENGKNVLLD------IDVQGAMTVMKKAG-- 113 Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE--RKDVMI 169 D I P + +R+ R + ++ E ++++ Sbjct: 114 ------------DAVYIFIAPPSFEELKQRLVKRGTEDKTNLERRLEDAKRELSF 156 >gi|153214853|ref|ZP_01949661.1| signal recognition particle-docking protein FtsY [Vibrio cholerae 1587] gi|124115096|gb|EAY33916.1| signal recognition particle-docking protein FtsY [Vibrio cholerae 1587] Length = 383 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 186 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 241 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 242 TGADSASVIYDAIEAAKARGIDVVIAD 268 >gi|256762084|ref|ZP_05502664.1| conserved hypothetical protein [Enterococcus faecalis T3] gi|256683335|gb|EEU23030.1| conserved hypothetical protein [Enterococcus faecalis T3] Length = 176 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L DE G Sbjct: 16 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 65 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 110 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 139 >gi|212638162|ref|YP_002314682.1| adenylylsulfate kinase [Anoxybacillus flavithermus WK1] gi|212559642|gb|ACJ32697.1| Adenylylsulfate kinase [Anoxybacillus flavithermus WK1] Length = 196 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 28/117 (23%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + + L +N + +L G ++ Sbjct: 29 FTGLSGSGKSTLANAVAKTLFEQNVQCY-----------------VLDGDNIRHGLNSDL 71 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A R +++ V + + G+I+L A+ + L + L + Sbjct: 72 GFSAEDRTENIRRIGEVAKLFVDSGQIVLT--------AFISPFRQDRQLVRNKLAQ 120 >gi|124028179|ref|YP_001013499.1| adenylate kinase [Hyperthermus butylicus DSM 5456] gi|123978873|gb|ABM81154.1| Adenylate kinase [Hyperthermus butylicus DSM 5456] Length = 205 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 81/220 (36%), Gaps = 34/220 (15%) Query: 6 FISF--EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 FI+ G+ G GKTT + + L+ K + +A ++ Sbjct: 7 FITVIVTGVPGVGKTTVLGRVAEKLRSKGVRFEIVNFGDYMFREASAAGLVRHRDEMRHL 66 Query: 64 A--EAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + +AAR +I A + G +L +D+ + L + Sbjct: 67 PLRRQLELQESAARA-----IIADASSKLGGDGVLL---VDTHAVIRTSTGFWPGLPENV 118 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 ++E + PD ++++ P +I + R Q R R R DV E R+ L+ Sbjct: 119 VRE-----LKPDSIVLIEAPPEIIVAR-QQRDKSRV--------RSDVASVETVRE-LLE 163 Query: 180 IARNQP-DRCHIVDSAH-SFQSVATN---ILNIVWELVQK 214 +AR +V ++ ++V N + EL++K Sbjct: 164 MARKAAMASAVLVAASVYPVENVEGNPDIAAEKIVELIEK 203 >gi|12044892|ref|NP_072702.1| spermidine/putrescine ABC transporter, ATP-binding protein, putative [Mycoplasma genitalium G37] gi|2506105|sp|P47288|POTA_MYCGE RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|3844651|gb|AAC71258.1| spermidine/putrescine ABC transporter, ATP-binding protein, putative [Mycoplasma genitalium G37] gi|166079041|gb|ABY79659.1| spermidine/putrescine ABC transporter, ATP-binding protein, putative [synthetic Mycoplasma genitalium JCVI-1.0] Length = 559 Score = 39.6 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 + G FI+ G G GKTT + LL Sbjct: 30 IKKGEFITILGPSGCGKTTLLRLLA 54 >gi|315173166|gb|EFU17183.1| conserved hypothetical protein [Enterococcus faecalis TX1346] Length = 188 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L DE G Sbjct: 28 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 77 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ DL + LKR R +E ++ Sbjct: 122 VQ------VYYFDLSFEETLKRHSQRNKNQEFGVVE 151 >gi|312884400|ref|ZP_07744105.1| cell division protein FtxY [Vibrio caribbenthicus ATCC BAA-2122] gi|309367922|gb|EFP95469.1| cell division protein FtxY [Vibrio caribbenthicus ATCC BAA-2122] Length = 397 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 200 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A +G +++ D Sbjct: 256 TGADSASVIYDAIESAKAKGVDVVIAD 282 >gi|300718288|ref|YP_003743091.1| putative lipoprotein [Erwinia billingiae Eb661] gi|299064124|emb|CAX61244.1| putative lipoprotein [Erwinia billingiae Eb661] Length = 244 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 66/227 (29%), Gaps = 52/227 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE---- 61 I+ G +G+GK+T L +++ V V A + L E Sbjct: 8 LIAVIGSDGSGKSTVCEHLIVHVKKYGPAVRVHLGKQAGNVGRAVSQLPLMGKSFERAIE 67 Query: 62 ------------FGAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSY--AYQ 106 G ++ + A +G ++L DRF + AY Sbjct: 68 RNTKKVKTKKTKLGLLPSVVIMTFVVRRLLRFRRMLAYRRQGLMVLTDRFPQAQIPGAYD 127 Query: 107 GER---DSSQHLFLDSL--------QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSL 153 G D+ + + + + ++ PD I L++ +D+ R R L Sbjct: 128 GTVFPPDTKGNGLVKWMAGRERSAFRWMAAH--KPDLVIKLNVDLDVACARKPDHRREQL 185 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + ++ E + +D+ V Sbjct: 186 SKKVA-----ATPLLTFEG-----AQLVD--------IDANKPVDQV 214 >gi|229097091|ref|ZP_04228057.1| uridine kinase [Bacillus cereus Rock3-29] gi|229103152|ref|ZP_04233838.1| uridine kinase [Bacillus cereus Rock3-28] gi|228680257|gb|EEL34448.1| uridine kinase [Bacillus cereus Rock3-28] gi|228686320|gb|EEL40232.1| uridine kinase [Bacillus cereus Rock3-29] Length = 196 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189 D TI +D P+DI + R R ++ + + K M H R+ +L+ +P+ Sbjct: 111 DVTIFIDTPLDIAMARRILRDFKEDTMSEIHNDLKHYMAHA--RKAYLEAIHTVKPNSDI 168 Query: 190 IVDSAHSFQSVATNILNIVWE 210 ++D + S + +++ + Sbjct: 169 VLDGSFSVSEIIDHVVEELDR 189 >gi|163940328|ref|YP_001645212.1| hypothetical protein BcerKBAB4_2369 [Bacillus weihenstephanensis KBAB4] gi|163862525|gb|ABY43584.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4] Length = 187 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189 D TI +D P+DI + R R + + + K + H R+ +L+ +P+ Sbjct: 104 DITIFIDTPLDIAMARRILRDFTEDKISEIHNDLKHYITHA--RKAYLEAINTVKPNSDI 161 Query: 190 IVDSAHSFQSVATNILNIVWELVQKRV 216 ++D + + ++ IV E ++ V Sbjct: 162 VLDGSLCVNEI---VVQIVEEFSRRNV 185 >gi|257093888|ref|YP_003167529.1| hypothetical protein CAP2UW1_2309 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046412|gb|ACV35600.1| protein of unknown function DUF344 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 422 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 28/94 (29%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG + AGK I L + V +P + Sbjct: 194 IIFEGRDAAGKGGAIKRFTEHLNPRGGRVVALEKPSELERGQW----------------- 236 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + + ++ G+I+ CDR Sbjct: 237 -----------YFQRYVKHLPTAGEIVFCDRSWY 259 >gi|255326864|ref|ZP_05367940.1| adenylate kinase [Rothia mucilaginosa ATCC 25296] gi|283457570|ref|YP_003362153.1| adenylate kinase [Rothia mucilaginosa DY-18] gi|255296081|gb|EET75422.1| adenylate kinase [Rothia mucilaginosa ATCC 25296] gi|283133568|dbj|BAI64333.1| adenylate kinase [Rothia mucilaginosa DY-18] Length = 187 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 47/218 (21%), Positives = 83/218 (38%), Gaps = 40/218 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN L I G GAGK T + L+ T + R + Sbjct: 1 MNR-LLIV--GPPGAGKGTQAVKIAEALK---IPAIST--------GDIFRKNIK--EET 44 Query: 61 EFGAEAEAIVFAAARL-DHV-ENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHL 115 E G EA++ + + + D V N++R L E ++ L D + R++SQ Sbjct: 45 ELGKEAKSYIDSGNLVPDSVTNNMVRARLEESDVVNGFLLDGY---------PRNTSQVH 95 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE-KRR 174 LDS+ + + D ++L D ++R+ NR + E D + ++V+ H K Sbjct: 96 ELDSI--LEAKGEKIDRVLLLVADNDELVERLLNRAA--EQGRTD--DNEEVIRHRLKVY 149 Query: 175 QIFLD-IARNQPDRCHI--VDSAHSFQSVATNILNIVW 209 + + +R + V+ V IL+ + Sbjct: 150 EEETAPLIAIYRERGIVKEVNGLGEIAEVTERILDALK 187 >gi|228908277|ref|ZP_04072122.1| uridine kinase [Bacillus thuringiensis IBL 200] gi|228851318|gb|EEM96127.1| uridine kinase [Bacillus thuringiensis IBL 200] Length = 186 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188 D TI +D P+DI + R R + +D D+ + R+ +L+ +P+ Sbjct: 101 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 157 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216 I+D + S + I + V EL ++ V Sbjct: 158 IILDGSLSVSEI---INHAVEELGRREV 182 >gi|229074987|ref|ZP_04207989.1| uridine kinase [Bacillus cereus Rock4-18] gi|228708044|gb|EEL60215.1| uridine kinase [Bacillus cereus Rock4-18] Length = 196 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 7/86 (8%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189 D TI +D P+DI + R R ++ + + K M H R+ +L+ +P+ Sbjct: 111 DVTIFIDTPLDIAMARRILRDFKEDTMSEIHNDLKHYMAHA--RKAYLEAIHTVKPNSDI 168 Query: 190 IVDSAHSFQSVATNILNIVWELVQKR 215 ++D + S + I+N V E + +R Sbjct: 169 VLDGSFSV----SEIINHVVEELDRR 190 >gi|219882752|ref|YP_002477916.1| type II secretion system protein E [Arthrobacter chlorophenolicus A6] gi|219861758|gb|ACL42099.1| type II secretion system protein E [Arthrobacter chlorophenolicus A6] Length = 409 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 17/45 (37%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 I EG G+GKTT I+ L + + R E E Sbjct: 170 LIILEGPTGSGKTTAIAALIKMVNRHYNKHIYMVEDPTEFVHEEI 214 >gi|160947095|ref|ZP_02094262.1| hypothetical protein PEPMIC_01027 [Parvimonas micra ATCC 33270] gi|158446229|gb|EDP23224.1| hypothetical protein PEPMIC_01027 [Parvimonas micra ATCC 33270] Length = 198 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 63/177 (35%), Gaps = 28/177 (15%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGV 59 M G + G G GK T +L R + Y + T R + + Sbjct: 9 MKKGFLMVVSGPSGVGKGTICDILLRDNKDIKYSISATSRNKRPNEEHGKNYFFVSNDEF 68 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ A+ + + +A ++ ++ + ++ +G +++ + +D A Q +++ Sbjct: 69 EKMIADKKLLEYARVHGNYYGTPKDFVLNSINQGDVVILE--IDVQGALQVKKNY----- 121 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFE--RKDVMI 169 PD ++ LP + +R+ R + E +K+V Sbjct: 122 -------------PDAVLVFVLPPDFEELKRRLVERGTEDEETVNLRMNNAKKEVEF 165 >gi|254291953|ref|ZP_04962734.1| signal recognition particle-docking protein FtsY [Vibrio cholerae AM-19226] gi|150422163|gb|EDN14129.1| signal recognition particle-docking protein FtsY [Vibrio cholerae AM-19226] Length = 389 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 192 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 247 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 248 TGADSASVIYDAIEAAKARGIDVVIAD 274 >gi|153826285|ref|ZP_01978952.1| signal recognition particle-docking protein FtsY [Vibrio cholerae MZO-2] gi|149739953|gb|EDM54132.1| signal recognition particle-docking protein FtsY [Vibrio cholerae MZO-2] Length = 395 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 198 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 253 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 254 TGADSASVIYDAIEAAKARGIDVVIAD 280 >gi|153830010|ref|ZP_01982677.1| signal recognition particle-docking protein FtsY [Vibrio cholerae 623-39] gi|148874495|gb|EDL72630.1| signal recognition particle-docking protein FtsY [Vibrio cholerae 623-39] Length = 385 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 188 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 243 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 244 TGADSASVIYDAIEAAKARGIDVVIAD 270 >gi|312109165|ref|YP_003987481.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1] gi|311214266|gb|ADP72870.1| deoxynucleoside kinase [Geobacillus sp. Y4.1MC1] Length = 222 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 67/226 (29%), Gaps = 46/226 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + T + + L +F + Sbjct: 15 ITIAGTVGVGKSTMTKALAKALNFR------------TSLEKVDTNPYLDKFYADFERWS 62 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEI 123 + F A R + G + DR + A+ + ++ + ++ E Sbjct: 63 FHLQIYFLAERF----KEQKRMFEYGGGFVQDRSIYED-AHIFAKMHFENGTMTAVDYET 117 Query: 124 SVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 PD I L+ + +KR++ R E + V ++ Sbjct: 118 YTSLFQAMVMTPYFPHPDLLIYLEGSFEEVIKRIRERGRPMEQ-------KTPVSYWKEM 170 Query: 174 RQIFLDIARNQP---------DRCHIVDSAHSFQSVATNILNIVWE 210 + + + I++ S + + I+ E Sbjct: 171 YERYEKWINEFNACPVLRVNINEYDIIEDEQSIEPIIKKAATIIHE 216 >gi|309364916|emb|CAP23520.2| CBR-DNA-2 protein [Caenorhabditis briggsae AF16] Length = 1123 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 EG+ G+GKTT IS+L + L N V +T Sbjct: 691 VEGLPGSGKTTLISVLIQCLVATNKKVLLTAF 722 >gi|294790846|ref|ZP_06756004.1| ABC transporter, ATP-binding protein [Scardovia inopinata F0304] gi|294458743|gb|EFG27096.1| ABC transporter, ATP-binding protein [Scardovia inopinata F0304] Length = 645 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 17/106 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ-RKN---YDVHVTREPG-------------GTPAAEA 49 ++ G GAGKTT ++LL RF + + D TRE T + Sbjct: 429 VAIVGPTGAGKTTLVNLLMRFYEVDQGEITIDGIKTREITRQNLRSHFGMVLQDTWLFDG 488 Query: 50 ARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 L GV + + + AAR HV+ +R + +L Sbjct: 489 TIRDNLFYGVHDPSLRTDDRLLEAARATHVDEFVRKLPQGYETVLT 534 >gi|257082963|ref|ZP_05577324.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] gi|256990993|gb|EEU78295.1| conserved hypothetical protein [Enterococcus faecalis E1Sol] Length = 177 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L DE G Sbjct: 17 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 66 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140 >gi|229508897|ref|ZP_04398387.1| signal recognition particle receptor protein FtsY [Vibrio cholerae B33] gi|229606695|ref|YP_002877343.1| signal recognition particle receptor protein FtsY [Vibrio cholerae MJ-1236] gi|227011852|gb|ACP08062.1| cell division protein FtsY [Vibrio cholerae O395] gi|229354014|gb|EEO18947.1| signal recognition particle receptor protein FtsY [Vibrio cholerae B33] gi|229369350|gb|ACQ59773.1| signal recognition particle receptor protein FtsY [Vibrio cholerae MJ-1236] Length = 389 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 192 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 247 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 248 TGADSASVIYDAIEAAKARGIDVVIAD 274 >gi|223985884|ref|ZP_03635922.1| hypothetical protein HOLDEFILI_03228 [Holdemania filiformis DSM 12042] gi|223962150|gb|EEF66624.1| hypothetical protein HOLDEFILI_03228 [Holdemania filiformis DSM 12042] Length = 206 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 53/183 (28%), Gaps = 41/183 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR--FLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M GL I G G GK T + L TR+ + + Sbjct: 20 MKKGLLIVLSGPSGVGKGTILKEFVNDPELNLAYSVSMTTRKMRPGEIEGVNYNFVDRPA 79 Query: 59 VDEFGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 ++ + E + +A ++ + EGK +L Sbjct: 80 FEQAIRDGELLEYAEFVGNYYGTPLKNVEKLRAEGKNVLL-------------------- 119 Query: 116 FLDSLQEISVQEVM------PD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKD 166 EI VQ PD TI + +P + KR++ R + E + + Sbjct: 120 ------EIEVQGCQQVMEKCPDALTIFI-IPPSMEELEKRIRGRGTEPEEIVQQRLSKAN 172 Query: 167 VMI 169 + Sbjct: 173 REM 175 >gi|121587716|ref|ZP_01677477.1| signal recognition particle-docking protein FtsY [Vibrio cholerae 2740-80] gi|121548015|gb|EAX58093.1| signal recognition particle-docking protein FtsY [Vibrio cholerae 2740-80] Length = 395 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 198 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 253 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 254 TGADSASVIYDAIEAAKARGIDVVIAD 280 >gi|15640178|ref|NP_229805.1| cell division protein FtsY [Vibrio cholerae O1 biovar El Tor str. N16961] gi|229517011|ref|ZP_04406457.1| signal recognition particle receptor protein FtsY [Vibrio cholerae RC9] gi|255743904|ref|ZP_05417859.1| signal recognition particle receptor protein FtsY [Vibrio cholera CIRS 101] gi|9654548|gb|AAF93324.1| cell division protein FtsY [Vibrio cholerae O1 biovar El Tor str. N16961] gi|229346074|gb|EEO11046.1| signal recognition particle receptor protein FtsY [Vibrio cholerae RC9] gi|255738387|gb|EET93777.1| signal recognition particle receptor protein FtsY [Vibrio cholera CIRS 101] Length = 391 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 194 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 249 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 250 TGADSASVIYDAIEAAKARGIDVVIAD 276 >gi|59797991|sp|Q5WGU8|KCY_BACSK RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase Length = 225 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 45/230 (19%), Positives = 81/230 (35%), Gaps = 29/230 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G ++ +G GAGK+T L D A + + Sbjct: 1 MAKGFNVAIDGPAGAGKSTVAKKTAEKLGFLYIDTGAMYRAITFAALAEGIDLHDGKALG 60 Query: 61 EFGAEAEAIVFAAARLDHVEN---VIRPALMEGKI------LLCDRFLDSSY-AYQGERD 110 + ++E + ++ V I A+ ++ + R + A Q E Sbjct: 61 KLLEKSELRLESSNEGTAVFWNGADITAAIRTNEVNSNVSLVASHREVREGMTAMQQELA 120 Query: 111 SSQHLFLDSLQEISVQEVMPDCT--IILDLPVDIGLKRVQNRY-SLRESACLDYFERKDV 167 S++ LD ++I V+PD + L V+ +R + R+ E FE+ Sbjct: 121 KSKNAVLDG-RDIGTH-VLPDANVKVFLTASVE---ERARRRHLEQLEKGLPSDFEQLKK 175 Query: 168 MIHEK-----RRQIF-LDIARNQPDRCHIVD-SAHSFQSVATNILNIVWE 210 I ++ R I L A + +VD ++ V IL++V E Sbjct: 176 DIAKRDELDSTRAIAPLKQAADA----QVVDTTSMGIDEVVETILDLVKE 221 >gi|268532354|ref|XP_002631305.1| C. briggsae CBR-DNA-2 protein [Caenorhabditis briggsae] Length = 1071 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 EG+ G+GKTT IS+L + L N V +T Sbjct: 674 VEGLPGSGKTTLISVLIQCLVATNKKVLLTAF 705 >gi|227080382|ref|YP_002808933.1| cell division protein FtsY [Vibrio cholerae M66-2] gi|254851533|ref|ZP_05240883.1| cell division protein FtsY [Vibrio cholerae MO10] gi|262151142|ref|ZP_06028281.1| signal recognition particle receptor protein FtsY [Vibrio cholerae INDRE 91/1] gi|262167011|ref|ZP_06034728.1| signal recognition particle receptor protein FtsY [Vibrio cholerae RC27] gi|298501091|ref|ZP_07010891.1| signal recognition particle-docking protein FtsY [Vibrio cholerae MAK 757] gi|227008270|gb|ACP04482.1| cell division protein FtsY [Vibrio cholerae M66-2] gi|254847238|gb|EET25652.1| cell division protein FtsY [Vibrio cholerae MO10] gi|262024529|gb|EEY43213.1| signal recognition particle receptor protein FtsY [Vibrio cholerae RC27] gi|262031036|gb|EEY49661.1| signal recognition particle receptor protein FtsY [Vibrio cholerae INDRE 91/1] gi|297540125|gb|EFH76186.1| signal recognition particle-docking protein FtsY [Vibrio cholerae MAK 757] Length = 393 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 196 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 251 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 252 TGADSASVIYDAIEAAKARGIDVVIAD 278 >gi|147673157|ref|YP_001218274.1| signal recognition particle-docking protein FtsY [Vibrio cholerae O395] gi|229508422|ref|ZP_04397926.1| signal recognition particle receptor protein FtsY [Vibrio cholerae BX 330286] gi|146315040|gb|ABQ19579.1| signal recognition particle-docking protein FtsY [Vibrio cholerae O395] gi|229354695|gb|EEO19617.1| signal recognition particle receptor protein FtsY [Vibrio cholerae BX 330286] Length = 387 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 190 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 245 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 246 TGADSASVIYDAIEAAKARGIDVVIAD 272 >gi|121728299|ref|ZP_01681330.1| signal recognition particle-docking protein FtsY [Vibrio cholerae V52] gi|121629429|gb|EAX61858.1| signal recognition particle-docking protein FtsY [Vibrio cholerae V52] Length = 397 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 200 GVNGVGKTTTIGKLAKQFQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 256 TGADSASVIYDAIEAAKARGIDVVIAD 282 >gi|71019167|ref|XP_759814.1| hypothetical protein UM03667.1 [Ustilago maydis 521] gi|46099612|gb|EAK84845.1| hypothetical protein UM03667.1 [Ustilago maydis 521] Length = 566 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 10/94 (10%) Query: 11 GIEGAGKTTHISLLKRFLQ------RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G G GKTT LL + R+ H E T + +L + Sbjct: 67 GPPGTGKTTLARLLAKSASSTDSTCRQGPPPHRFVEISATNSGANDVKKILDEALHRLEL 126 Query: 65 EAEAIVFAAARLDHV----ENVIRPALMEGKILL 94 A+ + + ++V+ PA+ +G+I+L Sbjct: 127 TAQRTLLFIDEIQRFNRAQQDVLLPAVEKGQIVL 160 >gi|315425933|dbj|BAJ47583.1| signal recognition particle receptor [Candidatus Caldiarchaeum subterraneum] Length = 302 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 I F G G+GKTT + L +L+++ Y V + Sbjct: 109 ILFVGPNGSGKTTTVVKLAHYLRKRGYSVILAS 141 >gi|288924655|ref|ZP_06418592.1| conserved hypothetical protein [Prevotella buccae D17] gi|315607660|ref|ZP_07882655.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|288338442|gb|EFC76791.1| conserved hypothetical protein [Prevotella buccae D17] gi|315250843|gb|EFU30837.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 361 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 6/102 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G AGKTT + + Y V E A ++ + G+ G +A Sbjct: 7 IVLTGGPCAGKTTALIKVIEHFNSLGYQVFTIPEVPTMFAQAGMNYLTKNQGLFYQGEKA 66 Query: 67 --EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 E + + + + +++CDR AY Sbjct: 67 TLEIQLGLEDKFMRMAKE----CDKPTLIVCDRGAMDISAYM 104 >gi|268316793|ref|YP_003290512.1| adenylate kinase [Rhodothermus marinus DSM 4252] gi|262334327|gb|ACY48124.1| adenylate kinase [Rhodothermus marinus DSM 4252] Length = 215 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 74/233 (31%), Gaps = 55/233 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G GAGK T L T + R + G +A Sbjct: 3 IVFMGPPGAGKGTQARRLAA---AYGLRHIST--------GDLIRAAIQEG--TPLGKKA 49 Query: 67 EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-- 122 + + + + V + + AL E D F+ + R Q +LD+L E Sbjct: 50 QPYIEKGQLVPDELVWELAKAALAENHY---DHFVLDGF----PRTIRQAEWLDALLEQQ 102 Query: 123 -----ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-----------FERKD 166 I + ++PD DL V+ L R + E+ LD+ ++ Sbjct: 103 GRPLQIVLNLIVPD-----DLIVER-LSRRRVHKLTGENYHLDFNPPPPDVDPSLIIQRP 156 Query: 167 VMIHEKRR---QIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVWE 210 E R +++ + + R + VD S V I ++ Sbjct: 157 DDRPEAIRRRLEVYRTTHEPLEQYYRQRGLLVDVDGVGSMDEVFARIQEVLRR 209 >gi|118469224|ref|YP_889229.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium smegmatis str. MC2 155] gi|118170511|gb|ABK71407.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase [Mycobacterium smegmatis str. MC2 155] Length = 617 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 20/97 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G + F G+ G+GK++ L+++ L K + +L Sbjct: 443 LTRGRTVWFTGLSGSGKSSVAMLVEQKLLGKGVPAY-----------------VLDGDNL 485 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILL 94 G A+ A R +++ + A G+I+L Sbjct: 486 RHGLNADLGFSMADRAENLRRLAHVASLLADSGQIVL 522 >gi|46396074|sp|O61069|KAD_TRYBR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|2967695|gb|AAC28787.1| adenylate kinase [Trypanosoma brucei rhodesiense] Length = 209 Score = 39.6 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 36/159 (22%) Query: 1 MNSGL----FISFEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARH 52 M G+ FI+ G G+GK T + L +TR H Sbjct: 44 MRRGIPLQIFIA--GPAGSGKRTQCKNIADRLGVVLISSGQ--VLTRGVESGSETSQLAH 99 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 +S G + + RL + + L+EG R++ Sbjct: 100 SYVSRGERV--PDTLVSMIMKDRLSQSDACEKGWLVEGY----------------PRNAQ 141 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 Q ++ V+P I+LDLP D+ +R+++R Sbjct: 142 QAQAVEEC------GVIPQVFILLDLPEDLSFRRLEHRR 174 >gi|322515294|ref|ZP_08068291.1| adenylate kinase [Actinobacillus ureae ATCC 25976] gi|322118670|gb|EFX90882.1| adenylate kinase [Actinobacillus ureae ATCC 25976] Length = 241 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 36/234 (15%), Positives = 72/234 (30%), Gaps = 55/234 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + T + R + E G +A Sbjct: 30 IILLGAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 76 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +A++ V + + AL++ +I D + + G + D+L+E Sbjct: 77 KALM---DEGKLVPDKLTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKE---A 126 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166 V D + D+ ++ ++R+ R + D R+D Sbjct: 127 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNQPKVEGKDDVTGEDLIIRQDD 186 Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + H++ + + A R +D + V+ + I+ Sbjct: 187 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 240 >gi|296282603|ref|ZP_06860601.1| adenylate kinase [Citromicrobium bathyomarinum JL354] Length = 215 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 76/232 (32%), Gaps = 49/232 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T L T + R + + G +A Sbjct: 3 IILLGPPGAGKGTQAHRLVDH---HGMRQLST--------GDMLRAAVKAG--TPVGKQA 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS-SQHLFLDSLQEISV 125 +AI+ + V + I AL++ + L D+ + G + +Q LD+L ++ Sbjct: 50 KAIM---DAGELVSDDIVSALIDDE--LASMSADTGAIFDGYPRTRAQAEQLDAL--LAK 102 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDY-----------------FERKD 166 D I L + + + R+ R++ D F+R+ Sbjct: 103 HGRKLDRVIELQVDEEALVDRITGRFTCAACGEGYHDRHKLPQIEGVCDKCGSTEFKRRP 162 Query: 167 VMIHEKRR---QIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVW 209 E R +++ + VD S + V+++I ++ Sbjct: 163 DDNEETVRHRMEVYRSETAPILPYYEEQGLVARVDGMGSIEEVSSSIDALLE 214 >gi|257899516|ref|ZP_05679169.1| deoxynucleoside kinase [Enterococcus faecium Com15] gi|257837428|gb|EEV62502.1| deoxynucleoside kinase [Enterococcus faecium Com15] Length = 217 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 42/234 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++ + Y+ E A E Sbjct: 2 IVLAGTIGAGKSSLTEMMAEHFDSQAFYESIDDNEVLPLFYA---------------NPE 46 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY---------AYQGERDSSQH 114 A + L+ I+ A+ + +L DR + DS A + E Sbjct: 47 QYAFLLQIYFLNKRFASIKQAMKDDNNVL-DRSIYEDSLLFHLNADLGRATETEVRVYDE 105 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + ++E+ + + PD + + + D L+R++ R E F+ +++ Sbjct: 106 LLENMMEELPYAAHKKHPDLLVHIRVSFDTMLERIEKRGRSYEQLS---FDPSLYDYYKE 162 Query: 173 RRQIFLDIARNQPDRCHI-VDSA--------HSFQSVATNILNIVWELVQKRVS 217 + + + I +D + + V I + E+ Q ++ Sbjct: 163 LNRRYDQWYEEYKESPKIQIDGDRYNFVEDPQAKEEVLKMIEEKLAEIRQTELA 216 >gi|55959193|emb|CAI15063.1| guanylate kinase 1 [Homo sapiens] Length = 241 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 66/187 (35%), Gaps = 37/187 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 22 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 68 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G D + E + R + I A G + + S A Q + ++ Sbjct: 69 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 119 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVM 168 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 120 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQAD 176 Query: 169 IHEKRRQ 175 + + ++ Sbjct: 177 MESRNQE 183 >gi|123443391|ref|YP_001007365.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166988291|sp|A1JNV2|AROL_YERE8 RecName: Full=Shikimate kinase 2; Short=SK 2 gi|122090352|emb|CAL13220.1| shikimate kinase II [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 174 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 62/212 (29%), Gaps = 44/212 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G GAGKTT L + L Y T + ++ G D Sbjct: 1 MTQTIFMV--GARGAGKTTIGKALAQAL---GYRFIDTDLFMQQTLQSSVAEIVAREGWD 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + V G +L + ++ Q Sbjct: 56 GFRLRESMAL------QTVTAPKTVVATGGGAVLS--HDNRTFMRQHG------------ 95 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIFL 178 I L ++ +R+ + L + + + R ++ Sbjct: 96 -----------MVIYLRASANVLAERLAEDPEDAQRPSLTGKPIVEEMLDVLASREPLYQ 144 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++A H++D+ + V IL+I+ + Sbjct: 145 EVAH------HVLDATQPPEEVVEQILHILAD 170 >gi|253578851|ref|ZP_04856122.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251849794|gb|EES77753.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 207 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 30/176 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 MN G+ + G GAGK T + L V TR+P P E R Sbjct: 1 MNKGILVVVSGFSGAGKGTVMKRLMEKYDGYALSVSATTRKP--RPGEEDGREYFFRTRD 58 Query: 60 DEFGAEAE-AIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + E A++ A +++ + + L G+ ++ + QG + Sbjct: 59 EFEKLIEEDALLEYAQYVENYYGTPRSYVEEQLQAGRNVILE------IEIQGAMKIKEK 112 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVM 168 + P+ ++ P + +R+ R + D R Sbjct: 113 I--------------PEALLVFVTPPTVEELERRLTGRGTETAQVIADRLARAGEE 154 >gi|209546952|ref|YP_002278870.1| hypothetical protein Rleg2_4895 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538196|gb|ACI58130.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 169 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 72/201 (35%), Gaps = 41/201 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G GKT+ + L+R+ Y V + + + L+ + Sbjct: 8 IEGGSGTGKTS----VATELERRGYHVVH-GDRVLAYVGDPETGLALAGPPEG------- 55 Query: 69 IVFAAAR-LDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A R + I P + + + + D +++ G R+ + L L Sbjct: 56 ----ADRIAWGYAHWIWP-VDKVRAIAADTTHPATFFCGGSRNFHKFLDLF--------- 101 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 D +LD+ V+ +R+ R + ER V+ + + R+ + Sbjct: 102 ---DKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRYHRSRE---HLPAGNN-- 150 Query: 188 CHIVDSAHSFQSVATNILNIV 208 +D+A++ SV +IL + Sbjct: 151 ---IDTANTIPSVVDDILAKL 168 >gi|116334546|ref|YP_796073.1| cobalt ABC transporter ATPase [Lactobacillus brevis ATCC 367] gi|116099893|gb|ABJ65042.1| ABC-type cobalt transport system, ATPase component (duplicated domains) [Lactobacillus brevis ATCC 367] Length = 550 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 53/158 (33%), Gaps = 19/158 (12%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +++G FI+ G G+GKTT + LK L A + G Sbjct: 29 IHAGEFITLVGATGSGKTTLLKQLKHELWPAGERTGSLTFQDTAIQALSPVESAQQIGYV 88 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGK--ILLCDR------FLDSSYAYQGERDSS 112 + + I+ +E + P G + DR +LD ++ Q ++ Sbjct: 89 AQDPQVQPIM-----ATVMEELAFPLENLGYPTATINDRIAEIANYLDLNHLLQRAIETL 143 Query: 113 QHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLK 145 L + SV + P I+LD L K Sbjct: 144 SGGQLQLVNLASVLALKPQ-VILLDEPTAQLDPTTAQK 180 >gi|88703537|ref|ZP_01101253.1| Uridine kinase [Congregibacter litoralis KT71] gi|88702251|gb|EAQ99354.1| Uridine kinase [Congregibacter litoralis KT71] Length = 218 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 27/187 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGG----TPAAEAARHVLLSCGVD 60 I+ G G+GK+ L L+R DV + +E + + AR + D Sbjct: 6 IAIAGPSGSGKSLFAETLCEELRRDAPLLDVVLIKEDAYYRDQSHMSLEARETV---NYD 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFL 117 A + ++ H+E AL G+ + + D + S A + + + Sbjct: 63 HPDAIEQDLL-----ASHLE-----ALSAGQAVEVPIYDYTVHSRTAETISVSPAPVIIV 112 Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + ++ + + +D P+DI L R R LD E R Sbjct: 113 EGILLLTHRALREACHIKFYMDTPLDICLLRRMARDIKERGRSLD---SVTAQYRESVRP 169 Query: 176 IFLDIAR 182 ++ + R Sbjct: 170 MYHEFIR 176 >gi|325954014|ref|YP_004237674.1| guanylate kinase [Weeksella virosa DSM 16922] gi|323436632|gb|ADX67096.1| Guanylate kinase [Weeksella virosa DSM 16922] Length = 188 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 16/38 (42%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M G I F GAGKTT + L ++ V T Sbjct: 1 MQKGKLIVFSAPSGAGKTTLVKHALEKLDNLSFSVSCT 38 >gi|323484697|ref|ZP_08090056.1| hypothetical protein HMPREF9474_01807 [Clostridium symbiosum WAL-14163] gi|323691764|ref|ZP_08106021.1| hypothetical protein HMPREF9475_00883 [Clostridium symbiosum WAL-14673] gi|323401934|gb|EGA94273.1| hypothetical protein HMPREF9474_01807 [Clostridium symbiosum WAL-14163] gi|323504130|gb|EGB19935.1| hypothetical protein HMPREF9475_00883 [Clostridium symbiosum WAL-14673] Length = 503 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 22/36 (61%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 I FEG+ AGK I+ L + L + +DV+ +R PG Sbjct: 43 IVFEGLGAAGKGVQINRLIQPLDPRGFDVYASRRPG 78 >gi|309379872|emb|CBX21648.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 487 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 294 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 348 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 349 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 399 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 400 AMPDAPHEIIVVLD 413 >gi|297293177|ref|XP_001085840.2| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform 4 [Macaca mulatta] Length = 680 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 115 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 160 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 161 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 208 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 209 FFEVFVDAPLHVCEQR 224 >gi|237802351|ref|ZP_04590812.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. oryzae str. 1_6] gi|331025208|gb|EGI05264.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. oryzae str. 1_6] Length = 514 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 315 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 370 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 371 TGADSASVIFDAVQAAKARGIDVLIAD 397 >gi|146387610|pdb|2OFX|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1 In Complex With Adpmg And Paps gi|146387611|pdb|2OFX|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1 In Complex With Adpmg And Paps Length = 207 Score = 39.6 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 39 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 84 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 85 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 132 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 133 FFEVFVDAPLHVCEQR 148 >gi|299065811|emb|CBJ36989.1| putative Deoxyadenosine kinase [Ralstonia solanacearum CMR15] Length = 214 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 58/177 (32%), Gaps = 22/177 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG GAGKT L L+ + P P + Sbjct: 9 IVVEGPIGAGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQ- 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQE-I 123 + F R + + A + G+ ++ D FL D +A Q + + D++ + + Sbjct: 61 --LRFLQQRAQRLA-AWQKATLTGERIVADSFLPRDRLFA-QLTLPADELALYDAMAQAL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ D + L + L R+ R E+ D E+ + ++ Sbjct: 117 ALPPQRIDLVVCLQARAEDLLPRIAKRAVPYETGI-------DAEYLERICAAYGEL 166 >gi|160903317|ref|YP_001568898.1| ABC transporter related [Petrotoga mobilis SJ95] gi|160360961|gb|ABX32575.1| ABC transporter related [Petrotoga mobilis SJ95] Length = 249 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 73/232 (31%), Gaps = 43/232 (18%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE--- 65 F G GAGKTT I +L L+ + + + + E R + + + Sbjct: 32 FLGPNGAGKTTTIKMLTGTLKPTSGQIFIMDKDYNNYELEIKREIGVVPDEPKMYENLKG 91 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDSLQEIS 124 +E I F N I E +CD F Y G+ L + + Sbjct: 92 SEYIEFVMNVYKLNSNEIHSRFNE----ICDAFGIDYLNDYIGDYSHGMKQKL-MVASVL 146 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 +++ I LD +GL R + L ++ + I L+IA Sbjct: 147 MRKPK---VIFLD-EPTVGLD---ARAARILKELLQKYKSEGSAIFFTTH--ILEIAEKM 197 Query: 185 PDRCHIVD-------------------SAHSFQSVA------TNILNIVWEL 211 DR I+D S + + + + I+ EL Sbjct: 198 CDRIGIIDHGRILAEGNLEELRSLSKLGNRSLEDIFLELTGGSEVKEIIDEL 249 >gi|145301094|ref|YP_001143935.1| kinase [Aeromonas salmonicida subsp. salmonicida A449] gi|142853866|gb|ABO92187.1| predicted kinase [Aeromonas salmonicida subsp. salmonicida A449] Length = 165 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 19/92 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I F G+ G+GK+T L + L + +A R +E G Sbjct: 1 MLIIFSGLPGSGKSTIARALAQRLGAVYLRI--------DTIEQAIRDA--ERTGEEMGP 50 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + AR L G ++ D Sbjct: 51 AGYFVAYGLAR---------ENLKLGSTVITD 73 >gi|119387101|ref|YP_918156.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Paracoccus denitrificans PD1222] gi|119377696|gb|ABL72460.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Paracoccus denitrificans PD1222] Length = 640 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 49/141 (34%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +++++ L LL G + Sbjct: 474 FTGLSGSGKSTIANIVEKKLHALGKH-----------------SFLLDGDNIRHGLNRDL 516 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V R G I+L A+ S + + D ++ Sbjct: 517 GFTDADRVENIRRVGEVARLMTDAGLIVLT--------AFISPFRSERQMVRDL---MAP 565 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E + + +D P+++ R Sbjct: 566 GEFVE---VFVDTPLEVAEAR 583 >gi|46108894|ref|XP_381505.1| hypothetical protein FG01329.1 [Gibberella zeae PH-1] Length = 207 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 32/151 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G+ +GK+T + L++ L + L Sbjct: 22 QRGLTIWLTGLSASGKSTVATALEQHLLHLGVAAYR-----------------LDGDNVR 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERD--SSQHLFLD 118 FG + R +++ + A + F DSS A + Sbjct: 65 FGLNKDLGFSEVDRNENIRRISEVAKL---------FADSSTIAITSFISPYRADRQVAR 115 Query: 119 SLQEISVQE---VMPDCTIILDLPVDIGLKR 146 L E + Q +P + +D+P+++ +R Sbjct: 116 QLHEQATQGGDAPIPFVEVYVDVPLEVAEQR 146 >gi|224541572|ref|ZP_03682111.1| hypothetical protein CATMIT_00742 [Catenibacterium mitsuokai DSM 15897] gi|224525484|gb|EEF94589.1| hypothetical protein CATMIT_00742 [Catenibacterium mitsuokai DSM 15897] Length = 352 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 45/185 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNY--------DVHVTREPGGTPAAEAARHVLLSCG 58 I+ +G G+GKTT + LK + + + T+E P R Sbjct: 185 IAIDGRCGSGKTTLANKLKAYFDCHIFHMDDFYLQEYQRTQERYNEPGGNVDRERFKKEV 244 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ +H + + RP F S+ + E + ++ Sbjct: 245 LEPL-------------KEHQDVLYRP------------FDCSTMS-ISEGALYSYKPIN 278 Query: 119 SLQEISVQEVMP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 ++ P D TI LD+ + KR++ R L+ F +K + + EK Sbjct: 279 IIE--GSYSCHPELIDDYDMTIFLDIDESLRYKRIEERNG---KEALNMFIKKWIPLEEK 333 Query: 173 RRQIF 177 F Sbjct: 334 YFSSF 338 >gi|209881658|ref|XP_002142267.1| UMP-CMP kinase [Cryptosporidium muris RN66] gi|209557873|gb|EEA07918.1| UMP-CMP kinase, putative [Cryptosporidium muris RN66] Length = 224 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 72/215 (33%), Gaps = 44/215 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + Y A + R ++ + ++ Sbjct: 33 GPPGSGKGTQCERIVEH-----YSFIHLS------AGDCLREAQIN------NDDTSKLI 75 Query: 71 FAAARLDHVE------NVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSL 120 R + ++R + E L D F + +G D+ ++ L Sbjct: 76 DHYIREGLIVPVEITIKLLRKKMQEHGWYDNYFLIDGFPRNQNNMKGWFDNVSSDEVEVL 135 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIF 177 + + PD D+ V+ LKR + S R + ++ + HE+ + F Sbjct: 136 GCLFLN--CPD-----DIVVERLLKR--GKTSGRTDDNKETIVKRLKVYHEETMPIVKYF 186 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 +I ++C +D++ V + + E++ Sbjct: 187 KEI-----NKCFTIDASPPIDEVWKTVRTSIEEII 216 >gi|160902147|ref|YP_001567728.1| ABC transporter related [Petrotoga mobilis SJ95] gi|160359791|gb|ABX31405.1| ABC transporter related [Petrotoga mobilis SJ95] Length = 298 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA--EAARHVLLSCG 58 M G I++ G GAGKTT I L+ L+ +V V E + + VL G Sbjct: 24 MQEGDVIAYVGPNGAGKTTTIKLILGLLKPSTGEVKVFSENPYSSLNARKKIDFVLDHPG 83 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALME 89 VD+ E + F + N I L + Sbjct: 84 VDDDLTAYENLKFYSMLYHAKVNNIDNILKK 114 >gi|157960069|ref|YP_001500103.1| sporulation domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845069|gb|ABV85568.1| Sporulation domain protein [Shewanella pealeana ATCC 700345] Length = 493 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----SCGVDE 61 + G +GAGKTT + L L+ + + + P +AE R +L+ D+ Sbjct: 30 LMVLTGEDGAGKTTLATALVNELENHSSALVIC--PKHCDSAEIRRKILIQLLSDPVFDD 87 Query: 62 FGAEAEAIVFAAA 74 E ++ Sbjct: 88 EIPLPECLLSTLD 100 >gi|146298505|ref|YP_001193096.1| guanylate kinase [Flavobacterium johnsoniae UW101] gi|146152923|gb|ABQ03777.1| Guanylate kinase [Flavobacterium johnsoniae UW101] Length = 190 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 13/24 (54%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL 24 MN G I F G+GKTT + L Sbjct: 1 MNKGKLIVFSAPSGSGKTTIVKHL 24 >gi|328957025|ref|YP_004374411.1| manganese transport system ATP-binding protein MntB [Carnobacterium sp. 17-4] gi|328673349|gb|AEB29395.1| manganese transport system ATP-binding protein MntB [Carnobacterium sp. 17-4] Length = 256 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 4/91 (4%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----LSCG 58 G + G GAGK+T I L ++ +V T E ++++ + Sbjct: 36 KGTLTAIVGPNGAGKSTLIKSLINLIKPIAGEVDFTFEQTKDENYGKNKNLVAYVPQNGS 95 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALME 89 VD V R H+ RP + Sbjct: 96 VDWDFPTTVLDVVVMGRYGHLGWFKRPKKKD 126 >gi|319950538|ref|ZP_08024448.1| guanylate kinase [Dietzia cinnamea P4] gi|319435788|gb|EFV90998.1| guanylate kinase [Dietzia cinnamea P4] Length = 200 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 36/183 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPA---------AEAAR 51 G I G GK+T ++ L+ L + V TR+P E R Sbjct: 15 KRGRLIVLAGPSAVGKSTVVARLRERLSDLYFSVSMTTRDPRPGEVDGRDYHFVTTEEFR 74 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + + E+ + + + +R AL EG+ +L Sbjct: 75 DAVAGGRMLEWAEIHRGLQLSGTPAE----PVRRALDEGRPVLI---------------E 115 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 + ++E + T+ L P + R++ R + E V + Sbjct: 116 VDLAGVRQIRESLPEGT----TVFL-APPSWEELEVRLRGRGTEPHDVVARRLETAKVEM 170 Query: 170 HEK 172 + Sbjct: 171 EAR 173 >gi|254568692|ref|XP_002491456.1| Uridylate kinase, catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines [Pichia pastoris GS115] gi|238031253|emb|CAY69176.1| Uridylate kinase, catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines [Pichia pastoris GS115] gi|328352034|emb|CCA38433.1| cytidylate kinase [Pichia pastoris CBS 7435] Length = 278 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 65/211 (30%), Gaps = 42/211 (19%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G GAGK T + L L + RE G+ E + + Sbjct: 87 GGPGAGKGTQCAKLVSNYGFVHLSAGDLLRAEQKRE--GSKYGEMISQYIRDGLIVP-QE 143 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A++ E ++ +GK RFL + +D + Sbjct: 144 VTIALL---------EQAMKENFEKGKT----RFLIDGF----------PRKMDQAKTFE 180 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQIFLD 179 + T+ D P + L+R+ R S RE + +++ E F Sbjct: 181 EKVAKSKVTLFFDCPESVLLERLLKRGQTSGREDDNAESIKKRFKTFVETSMPVVDYF-- 238 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + R V H V + +++++ E Sbjct: 239 ---GKQGRVLKVSCDHPVDQVYSQVVSVLKE 266 >gi|225711304|gb|ACO11498.1| Deoxynucleoside kinase [Caligus rogercresseyi] Length = 247 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 22/160 (13%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFGAEA 66 EG G+GK+T I + + D+ V +EP + + L+ + Sbjct: 34 VEGPTGSGKSTFIEMFRSR-----PDIFVVQEPLSSWMDVNGTDLFGLMYRDPQRWSGAF 88 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----------SYAYQGERDSSQHL 115 + + +RL V P I + +R + S + + Sbjct: 89 QLH-TSLSRLRSVTEK-TPWGKR--IRILERSIYSERYTFLEHLIKTEVMAKAETALMDK 144 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + D + + +++ PD I L D+ +R+ R E Sbjct: 145 WFDFMVKRFERQMKPDLIIYLRGSNDVFKERILKRGRTEE 184 >gi|218231022|ref|YP_002367232.1| hypothetical protein BCB4264_A2521 [Bacillus cereus B4264] gi|218158979|gb|ACK58971.1| hypothetical protein BCB4264_A2521 [Bacillus cereus B4264] Length = 189 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 43/219 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59 N IS + G GKTT LK + T + + G Sbjct: 6 NKTKIISIAAVSGGGKTTITERLKHKFKNSKALYFDSYTFDNSPADICKWI-----DDGA 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + ++ +E +I+ ++ I+ D +AY Sbjct: 61 NYDEWVLTPLIHD------IEQLIQNNTLDYIIV------DYPFAY-------------- 94 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178 L + + D TI +D P+DI + R R + +D D+ + R+ +L Sbjct: 95 LNSEMRKFI--DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYL 149 Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + +P+ I+D + S + I + V EL ++ V Sbjct: 150 EAIHTVKPNSDIILDGSLSVSEI---INHAVEELGRREV 185 >gi|229550433|ref|ZP_04439158.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200] gi|307274624|ref|ZP_07555804.1| hypothetical protein HMPREF9521_00251 [Enterococcus faecalis TX2134] gi|307278900|ref|ZP_07559961.1| hypothetical protein HMPREF9515_01217 [Enterococcus faecalis TX0860] gi|312952893|ref|ZP_07771753.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|229304461|gb|EEN70457.1| conserved hypothetical protein [Enterococcus faecalis ATCC 29200] gi|306504449|gb|EFM73658.1| hypothetical protein HMPREF9515_01217 [Enterococcus faecalis TX0860] gi|306508776|gb|EFM77866.1| hypothetical protein HMPREF9521_00251 [Enterococcus faecalis TX2134] gi|310629141|gb|EFQ12424.1| conserved hypothetical protein [Enterococcus faecalis TX0102] gi|315154352|gb|EFT98368.1| conserved hypothetical protein [Enterococcus faecalis TX0031] gi|315156586|gb|EFU00603.1| conserved hypothetical protein [Enterococcus faecalis TX0043] gi|315158328|gb|EFU02345.1| conserved hypothetical protein [Enterococcus faecalis TX0312] gi|315168342|gb|EFU12359.1| conserved hypothetical protein [Enterococcus faecalis TX1341] gi|315172098|gb|EFU16115.1| conserved hypothetical protein [Enterococcus faecalis TX1342] Length = 188 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT + L + L+ + + + R +L DE G Sbjct: 28 KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 76 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 77 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151 >gi|229065436|ref|ZP_04200687.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH603] gi|228715849|gb|EEL67618.1| Phosphoribulokinase/uridine kinase [Bacillus cereus AH603] Length = 218 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 17/191 (8%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I GI G AGKTT + L L + T + ++ + + Sbjct: 19 IVI-GISGHGAAGKTTFANKLINQLNQNKVSYINTDPYIVSSNVRKYTNIHYTYQNENHY 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A +A L +E ++ + G D + ++ Y S + ++ + Sbjct: 78 DKMTACHPSAHHLSALERDVQ-MVRAG----LDFYTMDTH-YIKSELISSENKVTIVEGM 131 Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 SV + P D I + L R +R + A ++Y + HE+RR + Sbjct: 132 SVAFINPNLFDLKIYFYTDGETELMRRSSRDIIERGADINYLRKS----HEERRIQYEVF 187 Query: 181 ARNQPDRCHIV 191 R I+ Sbjct: 188 MHQYSQRFDII 198 >gi|170700049|ref|ZP_02891073.1| KAP P-loop domain protein [Burkholderia ambifaria IOP40-10] gi|170135064|gb|EDT03368.1| KAP P-loop domain protein [Burkholderia ambifaria IOP40-10] Length = 727 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRK--NYDVHVTREPGGTPAAEAARHVLL 55 + G+ I EG G+GKTT + + L+R + V P A+A LL Sbjct: 40 SPGIVIGIEGPWGSGKTTVVRYIVESLKRSAGEPPIVVEFNPWMLAGADALVEALL 95 >gi|118592492|ref|ZP_01549883.1| ABC transporter, nucleotide binding/ATPase protein (glycerol-3-phosphate) [Stappia aggregata IAM 12614] gi|118434839|gb|EAV41489.1| ABC transporter, nucleotide binding/ATPase protein (glycerol-3-phosphate) [Stappia aggregata IAM 12614] Length = 342 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 M +G FI G G GK+T + L+ Sbjct: 27 MRAGEFIVIVGPSGCGKSTLLRLIA 51 >gi|89098341|ref|ZP_01171225.1| adenylylsulfate kinase [Bacillus sp. NRRL B-14911] gi|89086890|gb|EAR66007.1| adenylylsulfate kinase [Bacillus sp. NRRL B-14911] Length = 212 Score = 39.6 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 43/141 (30%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + ++ L ++ + LL G Sbjct: 39 FTGLSGSGKSTIANAVQAMLFKRGIQAY-----------------LLDGDNLRHGINGNL 81 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R +++ + + G ++L S + +D + I Sbjct: 82 SFSQEDRKENIRRTAEMAKLFSDAGFVVLA-----SLISPYKADRKMARELMDEGEFIE- 135 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 I +D PV+ KR Sbjct: 136 --------IYIDCPVEECEKR 148 >gi|296816587|ref|XP_002848630.1| adenylyl-sulfate kinase [Arthroderma otae CBS 113480] gi|238839083|gb|EEQ28745.1| adenylyl-sulfate kinase [Arthroderma otae CBS 113480] Length = 354 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 18/139 (12%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F GI G+GK+T L+ L K + R L E Sbjct: 30 FTGISGSGKSTIAVALEHELVEKRKLAAF------RLDGDNIRAGLNKGLGFTPQDRTE- 82 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL-FLDSLQEISVQE 127 + + V + G I + S YA +RD+++ L L ++ S + Sbjct: 83 ------NIRRIGEVAKLFADSGAIAIT--SFISPYA--ADRDAARKLHDLSPAEKESGET 132 Query: 128 VMPDCTIILDLPVDIGLKR 146 +P + +D+P+++ + R Sbjct: 133 PLPFIEVYIDVPLEVAMDR 151 >gi|299820567|ref|ZP_07052457.1| deoxyguanosine kinase [Listeria grayi DSM 20601] gi|299818062|gb|EFI85296.1| deoxyguanosine kinase [Listeria grayi DSM 20601] Length = 207 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 57/162 (35%), Gaps = 27/162 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ GAGK+++ LL L+ K E + LL + + Sbjct: 4 IVLAGMIGAGKSSYTELLASSLESK------------AFYEEIQDNALLEKFYE--DPKR 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-----SSYAYQGERDS--SQHLFLDS 119 A L+ I+ AL + +L DR + + Y+ S +LD Sbjct: 50 WAFALQIYFLNTRFRSIKAALTDKHNVL-DRSIYEDALFTQINYENGNMSKAEMATYLDL 108 Query: 120 LQEIS-----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 L + + + PD I L +D L R++ R E Sbjct: 109 LSNMMEELDGMPKKAPDLLIYLRGSLDTVLTRIKKRGRSYEQ 150 >gi|227819423|ref|YP_002823394.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase [Sinorhizobium fredii NGR234] gi|227338422|gb|ACP22641.1| NodQ bifunctional enzyme [Sinorhizobium fredii NGR234] Length = 633 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + L R L + + +L G + Sbjct: 465 FTGLSGSGKSTIANALDRLLHARGKHTY-----------------MLDGDNVRHGLNRDL 507 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++ V V + G I+L S + ++ + I Sbjct: 508 GFTEADRVENIRRVAEVAKLMADAGLIVLV-----SFISPFRGERRMARELMEEGEFIE- 561 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 I +D P++ +R Sbjct: 562 --------IFVDTPLEECARR 574 >gi|147836529|emb|CAN62091.1| hypothetical protein VITISV_013038 [Vitis vinifera] Length = 233 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 28/229 (12%), Positives = 67/229 (29%), Gaps = 66/229 (28%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYDVH---------VTREPGGTP--AAEAARHVLLS 56 G+ G +GK+T +L + V + + GG A +LL Sbjct: 5 GLTGGIASGKSTVSNL----FKVHGIPVVDADRVARDVLKKGSGGWRKVVAAFGNEILLD 60 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-------------KILLCDRFLDSSY 103 G + + + + + + P + G K+++ D Sbjct: 61 NGEVDRAKLGQIVFSDPGKRQLLNRPLAPFISSGIFWEVSKLWMKGFKVIVLD------- 113 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 LF + P + + + L+R+ R E + Sbjct: 114 --------VPLLFEAKMNGW----TKPIIVVW--VDPETQLQRLLARDRTSEEDARNRIN 159 Query: 164 -RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + L ++ ++D+ S + + N+++++ Sbjct: 160 AQMSLD---------LKRSKAD----IVIDNTGSLEDLNELFQNVLFQV 195 >gi|146387602|pdb|2OFW|A Chain A, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules gi|146387603|pdb|2OFW|B Chain B, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules gi|146387604|pdb|2OFW|C Chain C, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules gi|146387605|pdb|2OFW|D Chain D, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules gi|146387606|pdb|2OFW|E Chain E, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules gi|146387607|pdb|2OFW|F Chain F, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules gi|146387608|pdb|2OFW|G Chain G, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules gi|146387609|pdb|2OFW|H Chain H, Crystal Structure Of The Apsk Domain Of Human Papss1 Complexed With 2 Aps Molecules Length = 208 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 26/144 (18%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G+ GAGKTT L+ +L P T + R L F Sbjct: 32 RGCTIWLTGLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGF 82 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E R ++V + A + F D+ S ++ ++ Sbjct: 83 SPE--------DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQ 125 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146 I +P + +D P+ + +R Sbjct: 126 IHEGASLPFFEVFVDAPLHVCEQR 149 >gi|145591970|ref|YP_001153972.1| GTP-binding signal recognition particle [Pyrobaculum arsenaticum DSM 13514] gi|158514165|sp|A4WLQ3|SRP54_PYRAR RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|145283738|gb|ABP51320.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum arsenaticum DSM 13514] Length = 433 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53 G+EG+GKTT + L R+L ++ Y V + PAA + R + Sbjct: 106 GVEGSGKTTTSAKLARYLMKRGYKVGMVETDTIRPAAFDQLRQL 149 >gi|158319813|ref|YP_001512320.1| phosphotransferase (aminonucleoside antibiotic resistance) [Alkaliphilus oremlandii OhILAs] gi|158140012|gb|ABW18324.1| phosphotransferase (aminonucleoside antibiotic resistance) [Alkaliphilus oremlandii OhILAs] Length = 192 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 13/94 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + G+FI GI +GK+T LL K VH + R ++++ + Sbjct: 15 SKGIFI-ITGIMASGKSTVAQLLAERFP-KGVHVH----------GDIYRKMVVAGREEM 62 Query: 62 -FGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 EA+ R + G ++ Sbjct: 63 SPNPSEEALNQLDLRYKLAASTADAYFEAGFNVV 96 >gi|91202977|emb|CAJ72616.1| strongly similar to cytidylate kinase [Candidatus Kuenenia stuttgartiensis] Length = 223 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 79/244 (32%), Gaps = 53/244 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ +G G+GK+T L + L T R + Sbjct: 1 MIIAIDGPAGSGKSTVAKTLAKHL---GIRYLDT--------GAMYRALTWKAMQHNVNL 49 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD-R---------FLDSSYAYQGERDSSQH 114 + E A R+ + + +G + D R + ++ + + + Sbjct: 50 DDE---NALCRIMEQTQIYFESEEKGLQVFVDGRNVTKEIRSPSVTNNTHHISGKPGVRA 106 Query: 115 LFLDSLQEISVQE--------------VMPDCTIILDLPVDI-GLKRVQNRYSLRESACL 159 + ++ ++I+ + + LD ++I +R + R + L Sbjct: 107 MLVNLQRKIASKGNTVAEGRDIGTVVFPQAEKKFFLDARIEIRAKRRFRERETPDNENSL 166 Query: 160 DYFERKDVMIHEK--RRQIFLDIARNQPDRC----HIVDSA-HSFQSVATNILNIVWELV 212 D R+ + ++ R ++ P + +D+ + V I+ V L+ Sbjct: 167 DSVIREIALRDQRDTTR-------KDSPLKISDDSIYIDTTNLTLNEVIHRIIKEVNPLI 219 Query: 213 QKRV 216 + +V Sbjct: 220 KNKV 223 >gi|296195827|ref|XP_002745557.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Callithrix jacchus] Length = 624 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|295399492|ref|ZP_06809474.1| dephospho-CoA kinase [Geobacillus thermoglucosidasius C56-YS93] gi|294978958|gb|EFG54554.1| dephospho-CoA kinase [Geobacillus thermoglucosidasius C56-YS93] Length = 199 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 74/211 (35%), Gaps = 30/211 (14%) Query: 11 GIEG---AGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVD 60 G+ G +GK+T +++ + DV E +A + +L G Sbjct: 6 GLTGGIASGKSTVTKMIRELGIPVIDADQIARDVVKMGEEAYNQIIQAFGQEILQEDGEI 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + ++ PA+ + R L AY + + L + L Sbjct: 66 DRAKLGAIVFHNEQERKKLNAIVHPAVRQ-------RMLAEKEAYVQKGAKTVVLDIPLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + ++ D TI++ + D+ L+R+ R + L + + + EK ++ Sbjct: 119 FESELTHLV-DKTIVVYVDDDVQLERLMKRNGFSKEEALARI-QAQMPLREKVKK----- 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A ++D+ + + + I Sbjct: 172 ADA------VIDNNGTIEETKQQLWQIFKRW 196 >gi|260899650|ref|ZP_05908045.1| cell division protein FtsY [Vibrio parahaemolyticus AQ4037] gi|308106736|gb|EFO44276.1| cell division protein FtsY [Vibrio parahaemolyticus AQ4037] Length = 411 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 214 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 269 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 270 TGADSASVIYDAIEAAKARGVDVVIAD 296 >gi|260361295|ref|ZP_05774400.1| cell division protein FtsY [Vibrio parahaemolyticus K5030] gi|308111830|gb|EFO49370.1| cell division protein FtsY [Vibrio parahaemolyticus K5030] Length = 407 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 210 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 265 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 266 TGADSASVIYDAIEAAKARGVDVVIAD 292 >gi|229136365|ref|ZP_04265100.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BDRD-ST196] gi|228647098|gb|EEL03198.1| Phosphoribulokinase/uridine kinase [Bacillus cereus BDRD-ST196] Length = 218 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 17/191 (8%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I GI G AGKTT + L L + T + ++ + + Sbjct: 19 IVI-GISGHGAAGKTTFANKLINQLNQNKVSYINTDPYIVSSNVRKYTNIHYTYQNENHY 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A +A L +E ++ + G D + ++ Y S + ++ + Sbjct: 78 DKMTACHPSAHHLSALERDVQ-MVRAG----LDFYTMDTH-YIKSELISSKNKVTIVEGM 131 Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 SV + P D I + L R +R + A ++Y + HE+RR + Sbjct: 132 SVAFINPNLFDLKIYFYTDGETELMRRSSRDIIERGADINYLRKS----HEERRIQYEVF 187 Query: 181 ARNQPDRCHIV 191 R I+ Sbjct: 188 MHQYSQRFDII 198 >gi|225181320|ref|ZP_03734764.1| Guanylate kinase [Dethiobacter alkaliphilus AHT 1] gi|225167901|gb|EEG76708.1| Guanylate kinase [Dethiobacter alkaliphilus AHT 1] Length = 205 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 55/168 (32%), Gaps = 28/168 (16%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M GL I G GAGK T L V TR+P + Sbjct: 1 MTRQGLLIVISGPSGAGKGTVCRALLEKCPELVLSVSKTTRQPRAGEEDGVNYFFVSRED 60 Query: 59 VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 ++ A + + +A + + + L +G+ ++ + +D+ QG Sbjct: 61 FEDSIANGDFLEYAYVYGQYYGTPRSTVENLLNDGRDVILE--IDT----QGA------- 107 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDY 161 + ++ S I +P + R+ NR + E L+ Sbjct: 108 -MKVMEAFSAG------IFIFLMPPSGEELRSRIINRGTESE-ESLNR 147 >gi|225025030|ref|ZP_03714222.1| hypothetical protein EIKCOROL_01919 [Eikenella corrodens ATCC 23834] gi|224942260|gb|EEG23469.1| hypothetical protein EIKCOROL_01919 [Eikenella corrodens ATCC 23834] Length = 480 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + + ++A Sbjct: 288 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLAEWGERNGVTVISQA-- 343 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + + + A G I+L D R +Q ++ ++++ +Q+ Sbjct: 344 -SGDSAAVCFDAVEAAKARGIDIVLAD---------TAGRLPTQTHLMEEIKKVKRVLQK 393 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 394 SMPDAPHEIVVVLD 407 >gi|162149007|ref|YP_001603468.1| putative sulfate adenylyltransferase subunit 1 [Gluconacetobacter diazotrophicus PAl 5] gi|161787584|emb|CAP57180.1| putative sulfate adenylyltransferase subunit 1 [Gluconacetobacter diazotrophicus PAl 5] Length = 635 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 24/116 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T + L + D+ +L G A+ Sbjct: 463 GLPGAGKSTIARAAESRLFAQGIDI-----------------SVLDGDTLRAGLCADLGF 505 Query: 71 FAAARLDHVEN---VIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDS 119 A R ++V V R G+++ + R D A Q D + +F+D+ Sbjct: 506 SEADRTENVRRAAAVARILAETGQVVLVALISPRTADRDLARQIVGDGFREIFIDA 561 >gi|156937759|ref|YP_001435555.1| adenylylsulfate kinase [Ignicoccus hospitalis KIN4/I] gi|156566743|gb|ABU82148.1| adenylylsulfate kinase [Ignicoccus hospitalis KIN4/I] Length = 179 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 19/86 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT + + L Y V V + R + D + E Sbjct: 14 GLPGSGKTTLAKRVAKKLSEMGYRVEVL-------DGDWVRKTI---NPDAGFTKEE--- 60 Query: 71 FAAARLDHVENV--IRPALMEGKILL 94 R H++ V I L +++ Sbjct: 61 ----RALHLKRVAWIARLLARNGVVV 82 >gi|153840071|ref|ZP_01992738.1| cell division protein FtsY [Vibrio parahaemolyticus AQ3810] gi|149746343|gb|EDM57398.1| cell division protein FtsY [Vibrio parahaemolyticus AQ3810] Length = 403 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 206 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 261 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 262 TGADSASVIYDAIEAAKARGVDVVIAD 288 >gi|116283813|gb|AAH32513.1| PAPSS1 protein [Homo sapiens] Length = 571 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|104641467|gb|ABF73024.1| plastid adenylate kinase protein precursor, C-terminal part [Karenia brevis] Length = 209 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 21/104 (20%) Query: 134 IILDLPVDIGLKRVQNRYSLRESA-------------CLDYFERKDVMIHE---KRR-QI 176 I+ DLP DI + R R + + + R+D E + R ++ Sbjct: 39 ILFDLPEDISVSRAMGRLNDPVTGEIYHLKFKPPPADAIARLVRRDNDAKEEVVRTRLKV 98 Query: 177 FLD----IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + + I D+ ++D++ + + + + + + ++ Sbjct: 99 YHEHLSGIIELYKDKLVVIDASCKIEEITATVAERLIQALVSKI 142 >gi|91217479|ref|ZP_01254438.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Psychroflexus torquis ATCC 700755] gi|91184364|gb|EAS70748.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Psychroflexus torquis ATCC 700755] Length = 381 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 55/191 (28%), Gaps = 22/191 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +++ EG G+GKT+ ++ K P E F E Sbjct: 179 YLTIEGNIGSGKTSLAEMIAEDFNGKLILERFKDNPFLPKFYE-------DQARFAFPLE 231 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123 F A R + + I + + D + S + L + Sbjct: 232 MS---FLADRHKQLMDDISQLDLFSDFAISDYNPNKSLIFSKVTLQEDEYALYKKIFNIM 288 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIAR 182 PD + L + LK +Q R E DY + + +L+ Sbjct: 289 YSDVPKPDVYVYLYQNTERLLKNIQKRGRDYEQNISPDYL--------RRIHEGYLNFFN 340 Query: 183 NQPDR-CHIVD 192 +Q I+D Sbjct: 341 SQNKIDVKIID 351 >gi|22297728|ref|NP_680975.1| excinuclease ABC subunit A [Thermosynechococcus elongatus BP-1] gi|22293905|dbj|BAC07737.1| excinuclease ABC subunit A [Thermosynechococcus elongatus BP-1] Length = 949 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVL 54 G + G+ G+GK+T + +L LQ Y+V + +E G A V+ Sbjct: 635 GKLVCLTGVSGSGKSTLMHEVLYPALQHHLGYNVPLPKELGHIEGLNAIDKVI 687 >gi|28899730|ref|NP_799335.1| cell division protein FtsY [Vibrio parahaemolyticus RIMD 2210633] gi|260879107|ref|ZP_05891462.1| cell division protein FtsY [Vibrio parahaemolyticus AN-5034] gi|260897983|ref|ZP_05906479.1| cell division protein FtsY [Vibrio parahaemolyticus Peru-466] gi|28807982|dbj|BAC61219.1| cell division protein FtsY [Vibrio parahaemolyticus RIMD 2210633] gi|308087163|gb|EFO36858.1| cell division protein FtsY [Vibrio parahaemolyticus Peru-466] gi|308089649|gb|EFO39344.1| cell division protein FtsY [Vibrio parahaemolyticus AN-5034] Length = 405 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 208 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 263 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 264 TGADSASVIYDAIEAAKARGVDVVIAD 290 >gi|323467489|gb|ADX71176.1| Deoxyguanosine kinase [Lactobacillus helveticus H10] Length = 229 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 35/170 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 5 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 48 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113 + A + L+ + I+ AL E +L DR + + +Q D + Sbjct: 49 KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 107 Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 H ++ L+ + + PD + +++ D +KR++ R E D Sbjct: 108 ELLHNMMNELERMPKKN--PDLLVHINVSYDTMIKRIKKRGRPYEQLSYD 155 >gi|321313682|ref|YP_004205969.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis BSn5] gi|320019956|gb|ADV94942.1| deoxyadenosine/deoxycytidine kinase [Bacillus subtilis BSn5] Length = 217 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L + L + + E P E H + + Sbjct: 12 ITVAGTVGVGKSTLTKTLAKRL---GFKTSL-EEVDHNPYLEKFYH-----DFERWSFHL 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY-----AYQGERDSSQHLFLDS 119 + F A R + G + DR + D+ A +G + S Sbjct: 63 QIY-FLAERF----KEQKTIFEAGGGFVQDRSIYEDTGIFAKMHADKGTMSKVDYKTYTS 117 Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDYFERKDVMIHEKRRQ 175 L E ++ PD I L+ ++ L R++ R E Y+E +H + Sbjct: 118 LFEAMVMTPYFPHPDVLIYLEGDLENILNRIEQRGREMELQTSRSYWE----EMHTRYEN 173 Query: 176 ---IFLD--IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 F + + + + +++ +S + + I +++ + Sbjct: 174 WISGFNACPVLKLRIEDYDLLNDENSIEHIVDQIASVIHD 213 >gi|291530581|emb|CBK96166.1| ABC-type multidrug transport system, ATPase and permease components [Eubacterium siraeum 70/3] Length = 583 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDV------HVTREPGGTPAAEAARHV 53 SG I+ G G GKTT I+LL RF + V VTR+ + Sbjct: 369 KSGQQIAIVGPTGCGKTTIINLLMRFYDTDKGGISVDGNNIKDVTRDSLRLSYGMVLQET 428 Query: 54 LLSCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G E + AAA+ H + I+ ++ D Sbjct: 429 WIFDGTVRENIAYGKQDATEEEIVAAAKAAHCHSFIKRMKDGYDTIISD 477 >gi|260774826|ref|ZP_05883728.1| signal recognition particle receptor protein FtsY [Vibrio coralliilyticus ATCC BAA-450] gi|260609251|gb|EEX35406.1| signal recognition particle receptor protein FtsY [Vibrio coralliilyticus ATCC BAA-450] Length = 411 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 214 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNQVPVVAQH-- 269 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A +G +++ D Sbjct: 270 TGADSASVIYDAIESAKAKGVDVVIAD 296 >gi|257085665|ref|ZP_05580026.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256993695|gb|EEU80997.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1] Length = 176 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L DE G Sbjct: 16 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 65 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 110 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 139 >gi|237736970|ref|ZP_04567451.1| ATP-binding protein [Fusobacterium mortiferum ATCC 9817] gi|229420832|gb|EEO35879.1| ATP-binding protein [Fusobacterium mortiferum ATCC 9817] Length = 285 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 40/103 (38%), Gaps = 11/103 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCG 58 M+ + G+ G+GKTT +++ L+ Y + E G + + + L Sbjct: 1 MSKKKIVIVTGLSGSGKTTALNV----LEDMGYYTVDNLPCEIGIPFISSSIEKIALGMD 56 Query: 59 VDEFGAEAEAIVFAAARL---DHVENVIRPALMEGKILLCDRF 98 + F E F D + ++I L K ++ +R+ Sbjct: 57 IRSFKKIEEFTNFLKDLRGNPDVICSII--FLQASKEVILNRY 97 >gi|221632918|ref|YP_002522140.1| 3-dehydroquinate synthase [Thermomicrobium roseum DSM 5159] gi|221155440|gb|ACM04567.1| 3-dehydroquinate synthase [Thermomicrobium roseum DSM 5159] Length = 562 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 70/211 (33%), Gaps = 46/211 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G+ G+GK++ L+ L + V T + G F A Sbjct: 5 IALIGLSGSGKSSIAPLVADLL---GWRVVDTDRLVEERFGLPIAEIFARYGESVFRAAE 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRF-----LDSSYAYQGERDSSQHLFLDSLQ 121 + A+ +HV G I+L DR +++ + R +D L Sbjct: 62 REALLQASLAEHVV-----IATGGGIVLDDRNWIPLRTETALVHLRARI---ETLVDRLH 113 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 S +E+ P T+ R L K + ++RR ++ A Sbjct: 114 RQSERELQP--TV---------------RPLLAGDTA-----AKLQELWQRRRALYEQ-A 150 Query: 182 RNQPDRCHIVDSAHS-FQSVATNILNIVWEL 211 ++D+ + +A I+ V EL Sbjct: 151 D------VVIDTDDEAPEEIAQRIVEAVREL 175 >gi|74002091|ref|XP_863123.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 6 [Canis familiaris] Length = 636 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 60 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 154 FFEVFVDAPLHVCEQR 169 >gi|13470572|ref|NP_102141.1| adenylate kinase [Mesorhizobium loti MAFF303099] gi|20138506|sp|Q98N36|KAD_RHILO RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|14021314|dbj|BAB47927.1| adenylate kinase [Mesorhizobium loti MAFF303099] Length = 198 Score = 39.6 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 31/214 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T L + T + R + + E G A+A++ Sbjct: 7 GPPGAGKGTQAQRLVE---KHGIPQLST--------GDMLRAAVQAGS--EVGKRAKAVM 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL--DSLQE-ISVQE 127 + V + I A ++ +R + A D + D+++ +S + Sbjct: 54 ---DAGELVSDAIVNA------IVAERIDQADCAKGFILDGYPRTLVQADAVESMLSERG 104 Query: 128 VMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARN--- 183 + D I L + + R+ R + + + + E+ R+ + A Sbjct: 105 IGLDTVIELVVDDRALVGRIVKRAEDAKAAGQPVRKDDNPAVFEERLREYYKKTAPLTGY 164 Query: 184 --QPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + VD S +V I ++ + R Sbjct: 165 YYAKGKLKTVDGLASIDAVTNEIEAVLTAAAEAR 198 >gi|325118399|emb|CBZ53950.1| MGC78790 protein, related [Neospora caninum Liverpool] Length = 1387 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 69/206 (33%), Gaps = 35/206 (16%) Query: 15 AGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 +GK T + ++ +E A ++ G + A EA ++ Sbjct: 539 SGKQTLSKRIADETGFVALSFKDVAAKEIASKSALGQLLEPIVRVG-EMPPASVEARLWK 597 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 +A L+H N ++++ S + + + + L +P Sbjct: 598 SAFLEHSGN--------NRVVI----TSSRLSLERAKSLDREL-----------GGVPAL 634 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 + + P ++ + R +L +D + + ++ + + + +VD Sbjct: 635 VVFIGCPRELLVSRAAKAGALAHVEQID----ESLQHLADVKEYYQRL-----GKVFVVD 685 Query: 193 SAHSFQSVATNILNIVWELVQKRVSP 218 A S + + ++ +V ++P Sbjct: 686 GALSAAEMFQQVRHLFLPVVTYLLAP 711 >gi|330845405|ref|XP_003294578.1| hypothetical protein DICPUDRAFT_159601 [Dictyostelium purpureum] gi|325074940|gb|EGC28901.1| hypothetical protein DICPUDRAFT_159601 [Dictyostelium purpureum] Length = 470 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 33/154 (21%) Query: 79 VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE------ISVQEVMP-- 130 +E + +P G ++ D F ++ Q E +S + + +++ I+ P Sbjct: 180 LEELRKPEYRSG--VVVDGFPRTTI--QVELANSLYEKMKEMRKAFFNTPIAHGFPRPIF 235 Query: 131 DCTIILDLPVDIGLKRVQNRYSLR-------ESACLDYFERKDVMIHE----KRRQIFLD 179 T++ + + R R + + L E +D + E KR +IF D Sbjct: 236 RVTVLF-VEEKESIDRQLRRGEITRDTNKKLKEQGLPLLEERDTDLSEEAARKRYKIFRD 294 Query: 180 -------IARNQPDRCHIVDSAHSFQSVATNILN 206 + ++ P I+D++ + V IL Sbjct: 295 HYSTLQTLKKHFP--FSIIDASKTLDKVQQAILK 326 >gi|307595888|ref|YP_003902205.1| hypothetical protein Vdis_1780 [Vulcanisaeta distributa DSM 14429] gi|307551089|gb|ADN51154.1| protein of unknown function ATP binding protein [Vulcanisaeta distributa DSM 14429] Length = 256 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 35/102 (34%), Gaps = 15/102 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-----------RHVL 54 FI G G+GKTT +S +L+ YDV + R ++ Sbjct: 5 FIV--GTAGSGKTTLVSTFAEWLENNQYDVAIVNLDPAVEYVPYIPDIDIRDVVSARELM 62 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G+ AI A R +++ I +L D Sbjct: 63 RKYKLGPNGSIIAAIDMLAVRAQEIKSQIMDIGAN--YVLID 102 >gi|302853892|ref|XP_002958458.1| hypothetical protein VOLCADRAFT_33236 [Volvox carteri f. nagariensis] gi|300256186|gb|EFJ40458.1| hypothetical protein VOLCADRAFT_33236 [Volvox carteri f. nagariensis] Length = 183 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 21/185 (11%) Query: 8 SFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPG--GTPAAEAARHVL----LSCGVD 60 S EG AGK+T +S+L R L K + +EP ++ ++L Sbjct: 2 SVEGNISAGKSTFLSILNRHLLTDKGFS--FVKEPIEKWQSVGGSSVNLLDLFYRDPARM 59 Query: 61 EFGAEAEAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + + + N + L+E + + DR + + + L + Sbjct: 60 AYTFQNFVFLTRVLQERETYGNASKARLLE-RSVFSDRMVFVRAVHASLDLADHELAIYD 118 Query: 120 LQEISVQEVMPDCT----IILDLPVDIGLKRVQNRYSLRESA-CLDYF-----ERKDVMI 169 + +P I L + + R++ R E LDY +D ++ Sbjct: 119 AWFGPILASLPTLVPNGLIYLRASPNTCMARLRKRARSEEGGIPLDYLKVLHNNHEDWLL 178 Query: 170 HEKRR 174 H R Sbjct: 179 HAATR 183 >gi|291000372|ref|XP_002682753.1| predicted protein [Naegleria gruberi] gi|284096381|gb|EFC50009.1| predicted protein [Naegleria gruberi] Length = 506 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 78/203 (38%), Gaps = 11/203 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G AGK++ ++ L+ LQ + V + E A+ S D E+ Sbjct: 144 VVLTGGPCAGKSSAMTKLRERLQNLGFQVFIIPEAATLLMTGGAKVTDNSSVEDVLAFES 203 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 I A D+ + + R + + ILLCDR AY + + ++ ++ Sbjct: 204 SLIKTQMAIEDNFQEIARVS-KKPTILLCDRGTLDPKAYMADDLWQALMDMNGWSIPMLR 262 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHEKRRQIFLDIARNQP 185 + DC I L + IG + Y+L + + E+ + H + R ++ Sbjct: 263 DKRYDCVIHL-VTTAIG---AEKFYTLENNTVRTETIEQARELDH-RLRASYI----GHS 313 Query: 186 DRCHIVDSAHSFQSVATNILNIV 208 + ++ +SF + NI+ Sbjct: 314 QLYIVDNAVNSFDEKLQKVYNIL 336 >gi|156972628|ref|YP_001443535.1| signal recognition particle GTPase [Vibrio harveyi ATCC BAA-1116] gi|156524222|gb|ABU69308.1| hypothetical protein VIBHAR_00280 [Vibrio harveyi ATCC BAA-1116] Length = 408 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 211 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 266 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 267 TGADSASVIYDAIEAAKARGVDVVIAD 293 >gi|319937180|ref|ZP_08011587.1| guanylate kinase [Coprobacillus sp. 29_1] gi|319807546|gb|EFW04139.1| guanylate kinase [Coprobacillus sp. 29_1] Length = 190 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 54/179 (30%), Gaps = 29/179 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 GL I G G GK T L L TR+P + Sbjct: 6 KKGLLIILSGPSGVGKGTVRQELFKDESLNLAYSISMTTRKPRPAETDGVDYFFVSEEEF 65 Query: 60 DEFGAEAEAIVFAAARLDHVENV---IRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + E + +A ++ + L EGK ++ + ++ A Q Sbjct: 66 KQRIENNELLEYAQFVGNYYGTPKFYVEKLLDEGKNVVLE--IEVQGALQVMARC----- 118 Query: 117 LDSLQEISVQEVMPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 PD TI L +P + +R++ R + E + ++ I K Sbjct: 119 -------------PDALTIFL-VPPSFEELERRIRGRRTEAEDVVRERLDKASKEIATK 163 >gi|312212380|emb|CBX92463.1| similar to adenylylsulfate kinase [Leptosphaeria maculans] Length = 207 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 46/151 (30%), Gaps = 33/151 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I F G+ +GK+T + L++ L Y + L Sbjct: 22 QKGFTIWFTGLSASGKSTIATALEQHLLHLGYAAYR-----------------LDGDNVR 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERD--SSQHLFLD 118 FG + R +++ + A + F DSS A Sbjct: 65 FGLNKDLGFTEKDRNENIRRIAEVAKL---------FADSSTIAITSFISPYKKDRATAR 115 Query: 119 SLQEISVQEVMPDCTI---ILDLPVDIGLKR 146 L I+ + P +DLP+++ R Sbjct: 116 ELHAITTGDDEP-LAFVEVFVDLPLEVAEAR 145 >gi|301763136|ref|XP_002916986.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1-like [Ailuropoda melanoleuca] Length = 624 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|256618654|ref|ZP_05475500.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|257089484|ref|ZP_05583845.1| predicted protein [Enterococcus faecalis CH188] gi|256598181|gb|EEU17357.1| conserved hypothetical protein [Enterococcus faecalis ATCC 4200] gi|256998296|gb|EEU84816.1| predicted protein [Enterococcus faecalis CH188] Length = 177 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L DE G Sbjct: 17 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 66 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140 >gi|256075822|ref|XP_002574215.1| hypothetical protein [Schistosoma mansoni] gi|238659414|emb|CAZ30448.1| hypothetical protein Smp_027740 [Schistosoma mansoni] Length = 116 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 3/63 (4%) Query: 80 ENVIRPALMEGKILLCDRFLDSSYAYQGER-DSSQHLFLDSLQEISVQEVMPDCTIILDL 138 ++ I AL G ++ DR+ S A + + + + PD I L Sbjct: 35 QDEISSALKAGISVVVDRYSYSGIANTAAKFHPLSEFDWKWCRSMEYGLLQPD--FIFCL 92 Query: 139 PVD 141 + Sbjct: 93 APE 95 >gi|74002087|ref|XP_863076.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 4 [Canis familiaris] Length = 636 Score = 39.6 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 60 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 154 FFEVFVDAPLHVCEQR 169 >gi|325294335|ref|YP_004280849.1| signal recognition particle protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064783|gb|ADY72790.1| signal recognition particle protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 448 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 13/125 (10%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTT + L +L+++ V +T PAA + L D+ G V Sbjct: 106 GLQGSGKTTTAAKLANYLKKQGKRVLLTSVDVYRPAA----MLQLKKLGDQIG----IPV 157 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 F + + + AL++ K D D R L+ ++I +EV+P Sbjct: 158 FLEEKEKDAVKIAKDALLKAK----DESYDVLVVDTAGRLHIDEELLEEARKI-KEEVVP 212 Query: 131 DCTII 135 D T+ Sbjct: 213 DETLF 217 >gi|260438012|ref|ZP_05791828.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM 2876] gi|292809492|gb|EFF68697.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM 2876] Length = 451 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 15/107 (14%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA-----AEAARHV---- 53 G FI G+ G+GKTT + LK + + V + P E A ++ Sbjct: 11 KGNFILVCGMTGSGKTTLLKKLKEYFKDNAMMV--MQNPDNQIIMDSVYGELAVNLSGKG 68 Query: 54 LLSCGVDEFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCD 96 L + AE + R D + + L ++ CD Sbjct: 69 LKDDFIKRRIAETASFFSLSHMFDKRTDSLSGGEKQILNLASVIACD 115 >gi|134082621|emb|CAK42515.1| hypothetical protein An15g05620 [Aspergillus niger] Length = 292 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 16/124 (12%) Query: 14 GAGKTTHISLL--KRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GAGK+T L+ L + T ++ ++ + G + + E + Sbjct: 33 GAGKSTLTELITGAEGLSNGGIHSSTDLCQIFDTTISKEEYFIVDTPGFEP-NNKGEIFL 91 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 L + +P + G +L ++Y Q D + L Q P Sbjct: 92 QVTEMLQQL----QPNSIFGIW-----YLVNNYTRQ---DGFDREMVAWLTSFCGQSFCP 139 Query: 131 DCTI 134 D TI Sbjct: 140 DVTI 143 >gi|114765344|ref|ZP_01444461.1| guanylate kinase [Pelagibaca bermudensis HTCC2601] gi|114542324|gb|EAU45353.1| guanylate kinase [Roseovarius sp. HTCC2601] Length = 213 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 60/172 (34%), Gaps = 34/172 (19%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 MN GL I GAGK+T L+ + + V TR P H + Sbjct: 1 MNRRGLLIILSSPSGAGKSTLAKRLREWDPSVIFSVSATTRAPRTGEVDGEDYHFMTEAA 60 Query: 59 VDEFGAEAEAIVFAAARLDHV--------ENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 + A E + A HV + +R A+++GK +L D +QG + Sbjct: 61 FKKAVANGEMLEHA-----HVFGNFYGSPKGPVRDAIIDGKDVLFD------IDWQGAQQ 109 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDY 161 + E+++ +I L LP I LKR +D Sbjct: 110 MTN-------SELALHT----LSIFL-LPPSIAELKRRLESRGQDGPEVIDR 149 >gi|320335405|ref|YP_004172116.1| Deoxyadenosine kinase [Deinococcus maricopensis DSM 21211] gi|319756694|gb|ADV68451.1| Deoxyadenosine kinase [Deinococcus maricopensis DSM 21211] Length = 207 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 30/170 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH---VTREPGGTPAAEAARHVLLSCGVDE 61 ++++ G G+GK+T +L + + P R V Sbjct: 1 MYLAVSGNIGSGKSTLTGMLAE---KYGLNAVYEPFEENPYLQDFYGDMRRFAFHSQVFF 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGK-ILLCDR--FLDSS-YAY--QGERDSSQHL 115 E H+ V G ++ DR F D++ +A Sbjct: 58 LSKRLE---------QHLRVV------NGAPHVIQDRTVFEDANIFARNLHAGGHMDDRD 102 Query: 116 FLDSLQEIS--VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + L + + PD + +D + R+ R E A D + Sbjct: 103 WRTYLGLFEGILPALRTPDLLVHIDASLPTLRARIGRRGRTYEQAIPDAY 152 >gi|258542257|ref|YP_003187690.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-01] gi|256633335|dbj|BAH99310.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-01] gi|256636394|dbj|BAI02363.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-03] gi|256639447|dbj|BAI05409.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-07] gi|256642503|dbj|BAI08458.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-22] gi|256645558|dbj|BAI11506.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-26] gi|256648611|dbj|BAI14552.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-32] gi|256651664|dbj|BAI17598.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654655|dbj|BAI20582.1| sulfate adenylyltransferase subunit 1 [Acetobacter pasteurianus IFO 3283-12] Length = 626 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 32/120 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L DV +L G + Sbjct: 454 GLSGSGKSTLARAAETRLFADGVDVT-----------------VLDGDTLRAGLCKDLGF 496 Query: 71 FAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQHLFLDS 119 A R ++V V R G++++ DR A Q D + +F+D+ Sbjct: 497 SEADRTENVRRAAEVARLLRDAGQVVIVALISPLRSDR----DLARQIIGDGFEEVFVDA 552 >gi|255535670|ref|YP_003096041.1| Deoxyadenosine kinase [Flavobacteriaceae bacterium 3519-10] gi|255341866|gb|ACU07979.1| Deoxyadenosine kinase [Flavobacteriaceae bacterium 3519-10] Length = 204 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 50/145 (34%), Gaps = 28/145 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT ++L + + + L + + Sbjct: 3 IAVTGNIGAGKTTLTTMLAKH------------YGWDAQFEDVDHNPYLGDFYADMSKWS 50 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122 A+ F +R V+ + GK ++ DR + D+ + D S D Sbjct: 51 FALQIYFLGSRFRQVKEI----RDSGKNIVQDRTIYEDAHIFAENLNDMSLMTDRDFNNY 106 Query: 123 ISVQEVM------PDCTIIL--DLP 139 +V +M PD I L D+P Sbjct: 107 SAVFGLMKSFVSAPDLLIYLKSDVP 131 >gi|228921849|ref|ZP_04085164.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837854|gb|EEM83180.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 219 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 27/196 (13%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I GI G AGKTT + L + L + + T +++ +H ++ Sbjct: 20 IVI-GISGHGAAGKTTFTNRLVKLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76 Query: 64 AEAEAIVFAAAR--LDHVENVIRPALMEGKILL---CDRFLDSSYAYQGERDSSQHLFLD 118 + A H+ AL ++ D + ++ Y + S + Sbjct: 77 HRYK---MTACHPAAHHLA-----ALERDIHMVRAGLDFYTIDTH-YMKSKLISSENKVT 127 Query: 119 SLQEISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ +S + P D I + L R +R A ++Y + HE+RR Sbjct: 128 IVEGMSAAFINPDLFDLKIYFYTDGETELMRRSSRDIAERGADINYLRQS----HEERRI 183 Query: 176 IFLDIARNQPDRCHIV 191 + + R I+ Sbjct: 184 QYEVFMHSYSQRFDII 199 >gi|254384225|ref|ZP_04999569.1| dephospho-CoA kinase [Streptomyces sp. Mg1] gi|194343114|gb|EDX24080.1| dephospho-CoA kinase [Streptomyces sp. Mg1] Length = 204 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 34/210 (16%) Query: 11 GIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 GI GAGK+ LL + R +V PG A +L+ Sbjct: 9 GI-GAGKSEVSRLLAGYGAVVVDADRIAREVVEPGTPGLAAVVAAFGESVLTPEGRLDRP 67 Query: 65 EAEAIVFAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++VFA A+L + +++ P + + A + + + + + Sbjct: 68 KLGSLVFADPAKLQTLNSIVHPL------------VGARSAELEAAAGADAIVVHDVPLL 115 Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + P D +++D L R+ + E + R+ L +A Sbjct: 116 AENGLAPLYDLVVVVDAAPGTQLARLTALRGMAEEEARARMAA------QATREQRLAVA 169 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++D+ +++ + + EL Sbjct: 170 T------LVIDNDGPLEALEPQVRKVWEEL 193 >gi|184200294|ref|YP_001854501.1| polyphosphate kinase 2 [Kocuria rhizophila DC2201] gi|183580524|dbj|BAG28995.1| polyphosphate kinase 2 [Kocuria rhizophila DC2201] Length = 363 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 34/125 (27%), Gaps = 31/125 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L I FEG + AGK I L + V +P + Sbjct: 131 LLIIFEGRDAAGKGGAIKRFTEHLNPRGARVVALEKPTDIEQTQW--------------- 175 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + H+ + G+I+L DR S Y G + E Sbjct: 176 ------YFQRYVQHLPSG-------GEIVLMDR---SWYNRAGVERVMGYCTSQQYYEFM 219 Query: 125 VQEVM 129 Q Sbjct: 220 RQAPE 224 >gi|4102823|gb|AAD09325.1| ATP sulfurylase/APS kinase [Homo sapiens] Length = 624 Score = 39.2 bits (91), Expect = 0.36, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|329113424|ref|ZP_08242205.1| Bifunctional enzyme NodQ [Acetobacter pomorum DM001] gi|326697249|gb|EGE48909.1| Bifunctional enzyme NodQ [Acetobacter pomorum DM001] Length = 626 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 32/120 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L DV +L G + Sbjct: 454 GLSGSGKSTLARAAETRLFADGVDVT-----------------VLDGDTLRAGLCKDLGF 496 Query: 71 FAAARLDHVE---NVIRPALMEGKILL--------CDRFLDSSYAYQGERDSSQHLFLDS 119 A R ++V V R G++++ DR A Q D + +F+D+ Sbjct: 497 SEADRTENVRRAAEVARLLRDAGQVVIVALISPLRSDR----DLARQIIGDGFEEVFVDA 552 >gi|295693853|ref|YP_003602463.1| deoxyguanosine kinase [Lactobacillus crispatus ST1] gi|295031959|emb|CBL51438.1| Deoxyguanosine kinase [Lactobacillus crispatus ST1] Length = 228 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 31/168 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDS-- 119 + A + L+ + I+ AL E +L DR + + +Q D + +D+ Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106 Query: 120 --LQEISVQEVM-----PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 L + + PD + +++ D +KR+Q R E D Sbjct: 107 ELLHNMMSELKRMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD 154 >gi|170582971|ref|XP_001896373.1| adenylate kinase isoenzyme 1 [Brugia malayi] gi|158596432|gb|EDP34773.1| adenylate kinase isoenzyme 1, putative [Brugia malayi] Length = 347 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 43/215 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + + R+ V+ GA A+++ Sbjct: 162 GAPGAGKGTQCAKMVEK-----------YGLTHLSTGDLLRN-----EVESCGARADSLK 205 Query: 71 FAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISVQ 126 + V ++ L E S G R + + ++ + Sbjct: 206 KMMQNGELVPARIVLDLLKE---------AMSRATINGSRGFLIDGYPREIIQGEQFEHE 256 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182 PD I + +R NR + F+ I ++ + + +IA Sbjct: 257 VQSPDLVIYFKADKKVLYERCMNRQKISG-----RFDDSSETIQKRL-KTY-EIASTPVV 309 Query: 183 ---NQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 NQ + + S + Q V + + +++ K Sbjct: 310 DYYNQKGKLLQITSEGTVQDVFAIVETHLDKVISK 344 >gi|189424591|ref|YP_001951768.1| sulfate adenylyltransferase, large subunit [Geobacter lovleyi SZ] gi|189420850|gb|ACD95248.1| sulfate adenylyltransferase, large subunit [Geobacter lovleyi SZ] Length = 647 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L++ L + +LL G + Sbjct: 484 GLSGSGKSTIANALEQRLVQLGRHT-----------------MLLDGDNIRHGLNKDLGF 526 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 A R++++ V + G +++ Sbjct: 527 TEADRIENIRRIGEVAKLMTEAGLVVIT 554 >gi|29827190|ref|NP_821824.1| phosphotransferase (aminonucleoside antibiotic resistance) [Streptomyces avermitilis MA-4680] gi|29604288|dbj|BAC68359.1| putative phosphotransferase [Streptomyces avermitilis MA-4680] Length = 206 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 14/91 (15%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FGA 64 I+ GI AGK+T +L L + VHV + R ++++ + Sbjct: 17 LIT--GIPAAGKSTVAQMLAERLPQ---SVHV--------RGDQFRRMVINGRAEMTADP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLC 95 EA+ R VI G ++ Sbjct: 64 SDEALRQLRLRHSLTAKVIDQYFEAGFTVVA 94 >gi|83592322|ref|YP_426074.1| hypothetical protein Rru_A0986 [Rhodospirillum rubrum ATCC 11170] gi|83575236|gb|ABC21787.1| hypothetical protein Rru_A0986 [Rhodospirillum rubrum ATCC 11170] Length = 197 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 48/151 (31%), Gaps = 16/151 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G +GKT I L R V V E G A L D Sbjct: 8 IVFTGAPCSGKTEIIGRLAA---RHGGRVVVVPEVAGLAFAMN----LADGRADGRKIFF 60 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 EAI RL+ V L ++L DR AY +D+L + Sbjct: 61 EAIAALQVRLEEVAEACANRLDRP-VMLLDRGFFDVVAYAEAYG---ATEVDALGALGPG 116 Query: 127 EVMP--DCTIILDLP---VDIGLKRVQNRYS 152 V+P D L VD +R NR Sbjct: 117 GVVPRYDLVFNLGTAFGVVDEATRRANNRGE 147 >gi|15903245|ref|NP_358795.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae R6] gi|15458836|gb|AAL00006.1| ABC transporter ATP-binding protein - unknown substrate [Streptococcus pneumoniae R6] Length = 252 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 + G FIS GI G+GK+T + + L+ + +V + Sbjct: 41 SRGEFISILGISGSGKSTLLKCISSLLEPTSGEVIL 76 >gi|21228122|ref|NP_634044.1| ATPase [Methanosarcina mazei Go1] gi|20906565|gb|AAM31716.1| twitching mobility (PilT) related protein [Methanosarcina mazei Go1] Length = 639 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 4/70 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+ G GAGK+T + + R+L V P S Sbjct: 269 QRGILIA--GPPGAGKSTFAAGVARYLNDHGQVVKTMESPRDLQVPAEITQY--SPLNGR 324 Query: 62 FGAEAEAIVF 71 A+ ++ Sbjct: 325 MEDTADLLLL 334 >gi|114567820|ref|YP_754974.1| adenylate kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317303|sp|Q0AUK1|KAD_SYNWW RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|114338755|gb|ABI69603.1| Adenylate kinase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 215 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 36/151 (23%), Positives = 57/151 (37%), Gaps = 23/151 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP-GGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK T LLK R P + R + E G E Sbjct: 3 IILMGPPGAGKGTQAELLKA------------RFPIPHISTGDIFRDAV--NQGSELGQE 48 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH-LFLDSLQEIS 124 A+ + + V + I A+++ +I D DS + G ++ LD ++ Sbjct: 49 AQKYMSS---GQLVPDEITTAIVKERITQAD--CDSGFLLDGFPRTTDQAQALDQ--SLA 101 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 D I +D+P + ++R+ R S RE Sbjct: 102 ELGKKVDLAINIDVPTQLLIERLSGRISCRE 132 >gi|262275341|ref|ZP_06053151.1| maltose/maltodextrin transport ATP-binding protein MalK [Grimontia hollisae CIP 101886] gi|262220586|gb|EEY71901.1| maltose/maltodextrin transport ATP-binding protein MalK [Grimontia hollisae CIP 101886] Length = 377 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 42/216 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHV 53 +N G F+ F G G GK+T + L+ L+ V P + Sbjct: 26 INKGDFVVFVGPSGCGKSTLLRLIAGLEDITSGDLKIDG-KVCNDLPPPERGIGMVFQSY 84 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 L + + A + A A V+ +R ++ D+ A + + S Sbjct: 85 ALYPHMTVYDNMAFGLKLAKAEAKTVDEKVREVAAALQL-------DTLLARKPKALSGG 137 Query: 114 HLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 ++ V+E + D L + RVQ R + ER Sbjct: 138 QRQRVAIGRAIVREPK---VFLFDEPLSNLDASL---RVQMRMEIARLH-----ERLGAT 186 Query: 169 I----HEKRRQIFLDIARNQPDRCHIVDSAHSFQSV 200 + H++ + +A ++D+ + V Sbjct: 187 MIYVTHDQVEA--MTLATK----IVVLDAGR-VEQV 215 >gi|253575930|ref|ZP_04853264.1| deoxynucleoside kinase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844724|gb|EES72738.1| deoxynucleoside kinase [Paenibacillus sp. oral taxon 786 str. D14] Length = 217 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 67/223 (30%), Gaps = 41/223 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I+ G G GK+T + L L + + P E + + Sbjct: 12 LITVAGTVGVGKSTLTTALAARLGFR----TSMEKVDNNPYLEKFYQ-----DFERWSFH 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFLD 118 + F A R + + G + DR + +A QG + + Sbjct: 63 LQIY-FLAERF----KEQKAIVEAGGGFVQDRSIYEDTGIFAKMHADQGTMSKTDYETYT 117 Query: 119 SLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 SL E ++ PD I L+ + L R++ R E + DV E + Sbjct: 118 SLFEAMVMTPYFPHPDVLIYLEGNLSSILNRIRLRGREMEI-------QTDVSYWEHMHE 170 Query: 176 IFLDIARNQPDRCHIV-------DSA--HSFQSVATNILNIVW 209 + D C ++ D+ S + I+ Sbjct: 171 RYAKWIEEF-DACPVLRLNIDEYDATDEASLDEIIRQAAEIIH 212 >gi|225847932|ref|YP_002728095.1| cytidylate kinase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643147|gb|ACN98197.1| cytidylate kinase [Sulfurihydrogenibium azorense Az-Fu1] Length = 214 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I+ +G G+GK+T LL + L D A ++ L +E Sbjct: 1 MIIAIDGPAGSGKSTIAKLLAKKLGFTYIDTGAM----YRALALKVINLSLDPNNEE 53 >gi|225389887|ref|ZP_03759611.1| hypothetical protein CLOSTASPAR_03636 [Clostridium asparagiforme DSM 15981] gi|225044080|gb|EEG54326.1| hypothetical protein CLOSTASPAR_03636 [Clostridium asparagiforme DSM 15981] Length = 460 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 45/198 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKT+ R+ V T + A + + S G + F A Sbjct: 302 GAGKTSVAD---RYAADYGLTVVDTDQRIEEMAGMPIKDIFASRGEEA---------FRA 349 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 + + + + ++ G + + L+++ Sbjct: 350 LETEMLRELFKENEPR---VIS----------VGGGLPLRAENRELLKQLGT-------V 389 Query: 134 IILDLPVDIGLKRV----QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189 ++LD+ VD L+R+ +R LR E + + RR ++ + R Sbjct: 390 VLLDVSVDTVLERLGGDVSSRPMLRGDDVRGRVE-ELMAF---RRPVYRETC----HRTV 441 Query: 190 IVDSAHSFQSVATNILNI 207 V+ + + +A I I Sbjct: 442 DVNG-RTVEEIAAEIHKI 458 >gi|169825889|ref|YP_001696047.1| hypothetical protein Bsph_0288 [Lysinibacillus sphaericus C3-41] gi|168990377|gb|ACA37917.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 269 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 39/158 (24%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL + FEG++ AGK I L + + Y VH P Sbjct: 43 GLILVFEGMDAAGKGGAIKRLIERVDPRGYVVHPISAPQPHEL----------------- 85 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 R ++++ R G+I + DR + E +++ + + +E Sbjct: 86 -----------RYNYLQRFWRKLPQHGQIAVFDRSWYGRVLVERIEGFATKEEWSRAYEE 134 Query: 123 ISVQEVMPDCT--------IILDLPVDIGLKRVQNRYS 152 I+ E + T L + + LKR + R Sbjct: 135 INNFEKI--LTEGDYIIIKFWLHVSDEEQLKRFKEREQ 170 >gi|168210537|ref|ZP_02636162.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens B str. ATCC 3626] gi|168213977|ref|ZP_02639602.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens CPE str. F4969] gi|170711399|gb|EDT23581.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens B str. ATCC 3626] gi|170714516|gb|EDT26698.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens CPE str. F4969] Length = 227 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 17 KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74 K+T +++L + EP + +L + + + F Sbjct: 36 KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 82 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127 R H++ L+E + DR + + + ++ L+ + Sbjct: 83 RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 137 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186 P + L++ VD +KR+Q R E ER+ EK + + N Sbjct: 138 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 190 Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223 ++ F++V + V L+ +++S L + K Sbjct: 191 PILRINVDELDFENVPED-REYVLNLIDEKLSELENNK 227 >gi|167750843|ref|ZP_02422970.1| hypothetical protein EUBSIR_01826 [Eubacterium siraeum DSM 15702] gi|167656278|gb|EDS00408.1| hypothetical protein EUBSIR_01826 [Eubacterium siraeum DSM 15702] Length = 583 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDV------HVTREPGGTPAAEAARHV 53 SG I+ G G GKTT I+LL RF + V VTR+ + Sbjct: 369 KSGQQIAIVGPTGCGKTTIINLLMRFYDTDKGGISVDGNNIKDVTRDSLRLSYGMVLQET 428 Query: 54 LLSCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G E + AAA+ H + I+ ++ D Sbjct: 429 WIFEGTVRENIAYGKQDATEEEIVAAAKAAHCHSFIKRMKDGYDTIISD 477 >gi|55959198|emb|CAI15068.1| guanylate kinase 1 [Homo sapiens] Length = 242 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 45/221 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 1 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 47 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G D + E + R + I A G + + S A Q + ++ Sbjct: 48 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 98 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 LD ++ I ++ P I + + P + + R++ R + E + + + Sbjct: 99 VLDVDLQGVRNIKATDLRP---IYISVQPPSLHVLRLRQRNTETEESLVKRLAAAQADME 155 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + +P +V S + + E+ Sbjct: 156 ----------SSKEPGLFDVVIINDSLDQAYAELKEALSEV 186 >gi|118575617|ref|YP_875360.1| signal recognition particle GTPase [Cenarchaeum symbiosum A] gi|118194138|gb|ABK77056.1| signal recognition particle GTPase [Cenarchaeum symbiosum A] Length = 397 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 16/126 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGVDEFGAEAEAI 69 GI+G+GK+T + L + L R+ Y V P A R + V+ +G E E+ Sbjct: 64 GIQGSGKSTITAKLAKLLTRQGYKTGVVGADTYRPGALVQLRTMCERSNVEVYGEEGES- 122 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 V +R ++L D R + LD ++ I + Sbjct: 123 ----DAPAVVRRGLRHFGDSCDVILVD---------TAGRHKEEGELLDEMKRIG-KAAE 168 Query: 130 PDCTII 135 PD ++ Sbjct: 169 PDLALL 174 >gi|328472443|gb|EGF43309.1| signal recognition particle-docking protein FtsY [Vibrio parahaemolyticus 10329] Length = 403 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 206 GVNGVGKTTTIGKLAKQFQSQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 261 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 262 TGADSASVIYDAIEAAKARGVDVVIAD 288 >gi|298243947|ref|ZP_06967754.1| adenylate kinase [Ktedonobacter racemifer DSM 44963] gi|297557001|gb|EFH90865.1| adenylate kinase [Ktedonobacter racemifer DSM 44963] Length = 219 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 34/231 (14%), Positives = 63/231 (27%), Gaps = 46/231 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G +G+GK T L + L ++ + E + Sbjct: 3 IILIGAQGSGKGTQAEKLSQSLDIRHVASGDLFRSAISQQTELGLKAKKYMDDGHLVPDD 62 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 I RL P G ++ D F + Q ++ Sbjct: 63 LTIAMVLDRLQA------PDCANG--VILDGFPRTIAQSQALDKGLANV----------- 103 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFER-----------KDVMIHEKRRQ 175 D + L++P LKR+ RY + + E ++++ Sbjct: 104 GKRVDYALYLEVPRAELLKRLSGRYICKAHQHVYNIETNPPQIAGICDIDGSELYQRSDD 163 Query: 176 IFLDIARN----QPDRCHIVD------------SAHSFQSVATNILNIVWE 210 I + D H++D S V ++N++ E Sbjct: 164 RGEAIQKRLDIFFNDTIHLIDYYDGQQKLIRVNGNQSIDRVQQELVNVISE 214 >gi|295096061|emb|CBK85151.1| amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 271 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 22/47 (46%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 ++ G G+GK+T I L+ + ++ + +P G + R + Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLSGGEILIDHKPTGQLSGSRLRQL 98 >gi|289522950|ref|ZP_06439804.1| guanylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503493|gb|EFD24657.1| guanylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 201 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 58/167 (34%), Gaps = 28/167 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G G GAGK T L + L Y + TR+P + + + E Sbjct: 13 KGYLFVISGPSGAGKGTIRRELFKRLSDLVYSISCTTRQPREGEQ-DGVDYYFVEGEEFE 71 Query: 62 FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 ++ + A + + + L EGK ++ L + Sbjct: 72 KRKKSGDFLEWAFVHGNYYGTPKKEVLKNLEEGKDVI--------------------LEI 111 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 D ++V++V P+ +I LP ++ +R+ +R + E + Sbjct: 112 DVQGALNVKKVFPEAVLIFILPPSEEVLRERLISRGTENEESLRTRL 158 >gi|229178876|ref|ZP_04306236.1| uridine kinase [Bacillus cereus 172560W] gi|228604641|gb|EEK62102.1| uridine kinase [Bacillus cereus 172560W] Length = 189 Score = 39.2 bits (91), Expect = 0.37, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 8/83 (9%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188 D TI +D P+DI + R R + +D D+ + R+ +L+ +P+ Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160 Query: 189 HIVDSAHSFQSVATNILNIVWEL 211 I+D + S + I + V EL Sbjct: 161 IILDGSLSVSEI---INHAVEEL 180 >gi|332044499|gb|EGI80693.1| 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase [Lacinutrix algicola 5H-3-7-4] Length = 375 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 61/190 (32%), Gaps = 20/190 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ + + N + + R + + E Sbjct: 180 YIAIEGNIGAGKTSLATKMA---NDYNAKLILERFADNPFLPKFYKDAQRYAFTLEMS-- 234 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL-DSLQEIS 124 F A R + + + + ++ D + S + L L + Sbjct: 235 -----FLADRYQQINDDLSQLDLFKDFIVSDYDIFKSLIFSKITLHQDEFKLYRKLFYLM 289 Query: 125 VQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 +++ P+ + L + ++ R E D EK +L+ +N Sbjct: 290 YKDIAKPELYVYLYQNTKRLKENIKKRGRKYEQDI-------DNEYLEKINAGYLNFLKN 342 Query: 184 QPD-RCHIVD 192 Q D I+D Sbjct: 343 QTDLNVKIID 352 >gi|265756823|ref|ZP_06090811.1| guanylate kinase [Bacteroides sp. 3_1_33FAA] gi|263233609|gb|EEZ19229.1| guanylate kinase [Bacteroides sp. 3_1_33FAA] Length = 189 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 5/101 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 M +G I F G+GK+T I+ L ++ + T P + LS Sbjct: 1 MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF 60 Query: 60 DEFGAEAEAIVF---AAARLD-HVENVIRPALMEGKILLCD 96 + A E + + RL ++ + L G+ ++ D Sbjct: 61 KQRIANDEFLEYEEVYENRLYGTLKAQVEKQLEAGQNVIFD 101 >gi|228965487|ref|ZP_04126573.1| uridine kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794217|gb|EEM41735.1| uridine kinase [Bacillus thuringiensis serovar sotto str. T04001] Length = 189 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188 D TI +D P+DI + R R + +D D+ + R+ +L+ +P+ Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216 I+D + S + I + V EL ++ V Sbjct: 161 IILDGSLSVSEI---INHAVEELGRREV 185 >gi|261379617|ref|ZP_05984190.1| signal recognition particle-docking protein FtsY [Neisseria subflava NJ9703] gi|284798099|gb|EFC53446.1| signal recognition particle-docking protein FtsY [Neisseria subflava NJ9703] Length = 510 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 317 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 371 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 372 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 422 Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159 MPD ++LD +IG V + E+ L Sbjct: 423 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 456 >gi|317509243|ref|ZP_07966864.1| adenylate kinase [Segniliparus rugosus ATCC BAA-974] gi|316252453|gb|EFV11902.1| adenylate kinase [Segniliparus rugosus ATCC BAA-974] Length = 182 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 70/200 (35%), Gaps = 25/200 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK T +LL + L + T + E+ L ++ + + Sbjct: 8 GLPGAGKGTQSALLAKSL---DVPHVSTGDLFRANIGESTP---LGQEAKKYLDAGQLVP 61 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 + + + +P +G + D + R Q L + ++ Sbjct: 62 SSVTNAMVKDRLSQPDARKGY--ILDGY---------PRTVDQAEALSDI--LAELGEKI 108 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 D + LP ++ ++R+ R ++ + + IH+ + LD R D Sbjct: 109 DVVLSFVLPEEVVVERMLARGRADDTEE---IIKGRLQIHKNETEPLLDFYR---DLVVS 162 Query: 191 VDSAHSFQSVATNILNIVWE 210 +D+ S + V L + + Sbjct: 163 IDAVGSVEEVQERALAALDK 182 >gi|228952883|ref|ZP_04114951.1| uridine kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228806793|gb|EEM53344.1| uridine kinase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 186 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188 D TI +D P+DI + R R + +D D+ + R+ +L+ +P+ Sbjct: 101 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 157 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216 I+D + S + I + V EL ++ V Sbjct: 158 IILDGSLSVSEI---INHAVEELGRREV 182 >gi|241664042|ref|YP_002982402.1| deoxynucleoside kinase [Ralstonia pickettii 12D] gi|240866069|gb|ACS63730.1| deoxynucleoside kinase [Ralstonia pickettii 12D] Length = 214 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 58/177 (32%), Gaps = 22/177 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT L L+ T A AR + Sbjct: 9 IVVEGPIGVGKTALAQRLADHLRAS------TLFETPAENAFIAR-FYEDPARYALPVQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSL-QEI 123 ++ A RL A + G+ ++ D FL D +A Q + + D++ + Sbjct: 62 RFLLQRAERL----KAWHKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMANAL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + D + L + L RV R E+ D E+ + ++ Sbjct: 117 ALPQQRIDLVVCLQARAEDLLPRVTRRAVPYETGI-------DAEYLERICAAYGEL 166 >gi|138894297|ref|YP_001124750.1| spermidine/putrescine ABC transporter ATP-binding protein [Geobacillus thermodenitrificans NG80-2] gi|134265810|gb|ABO66005.1| Spermidine/putrescine ABC transporter ATP-binding protein [Geobacillus thermodenitrificans NG80-2] Length = 374 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 M G F + G G GKTT + L+ F++ + V+ Sbjct: 40 MERGKFYTLLGPSGCGKTTILRLIAGFIEPTDGTVYF 76 >gi|114556435|ref|XP_513390.2| PREDICTED: cytidylate kinase isoform 3 [Pan troglodytes] Length = 211 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 51/176 (28%), Gaps = 45/176 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T + + A E R + Sbjct: 42 GGPGAGKGTQCARIVEK-----------YGYTHLSAGELLRDERKNPDS----------- 79 Query: 71 FAAARLDHVENVIRPALMEGKIL-------LCDRFLDSSYAYQGERDSSQHLFL----DS 119 +I + EGKI+ L R +D + A +R+ D+ Sbjct: 80 -------QYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQRNKFLIDGFPRNQDN 132 Query: 120 LQEIS-VQEVMPDC--TIILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIH 170 LQ + + D + D +I ++R R + + E++ + + Sbjct: 133 LQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLEKRYLAVF 188 >gi|62738384|pdb|1X6V|B Chain B, The Crystal Structure Of Human 3'-Phosphoadenosine-5'- Phosphosulfate Synthetase 1 gi|62738385|pdb|1X6V|A Chain A, The Crystal Structure Of Human 3'-Phosphoadenosine-5'- Phosphosulfate Synthetase 1 gi|75765501|pdb|1XJQ|B Chain B, Adp Complex Of Human Paps Synthetase 1 gi|75765502|pdb|1XJQ|A Chain A, Adp Complex Of Human Paps Synthetase 1 gi|75765503|pdb|1XNJ|B Chain B, Aps Complex Of Human Paps Synthetase 1 gi|75765504|pdb|1XNJ|A Chain A, Aps Complex Of Human Paps Synthetase 1 Length = 630 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|89092565|ref|ZP_01165518.1| hypothetical protein MED92_14703 [Oceanospirillum sp. MED92] gi|89083077|gb|EAR62296.1| hypothetical protein MED92_14703 [Oceanospirillum sp. MED92] Length = 160 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 32/163 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ FI F G GAGKTT L + + E L S Sbjct: 1 MDKSRFIFFCGKMGAGKTTLSRKLAAQ-----RNAVLLSED----------EWLASLYPG 45 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + + + I ++ ++++++ L G ++ D Q + S+ Sbjct: 46 QISSLQDYIHYSGLLRPQIKSLVQSILRSGTDVVMD---------FPANTPKQRAWFRSI 96 Query: 121 --QEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLD 160 + + E+ I +DLP ++ L+++ R E A D Sbjct: 97 FSETGAEHEL-----IYIDLPDEVCLQQIAKRSAEQPERAATD 134 >gi|320154974|ref|YP_004187353.1| signal recognition particle receptor protein FtsY subunit alpha [Vibrio vulnificus MO6-24/O] gi|319930286|gb|ADV85150.1| signal recognition particle receptor protein FtsY (alpha subunit) [Vibrio vulnificus MO6-24/O] Length = 395 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 198 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 253 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 254 TGADSASVIYDAIEAAKARGVDVVIAD 280 >gi|296533362|ref|ZP_06895962.1| plasmid partitioning protein RepA [Roseomonas cervicalis ATCC 49957] gi|296266317|gb|EFH12342.1| plasmid partitioning protein RepA [Roseomonas cervicalis ATCC 49957] Length = 399 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 13/86 (15%) Query: 14 GAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 G+GKTT + L ++L + + V + +P + +A L G +E ++A Sbjct: 123 GSGKTTTAAHLAQYLAFQGHRVLALDLDPQASLSALFGYQPELDIGENET-------LYA 175 Query: 73 AARLDH----VENVIRPALMEG-KIL 93 A R D + VIRP+ + G I+ Sbjct: 176 ALRYDRQRKPLREVIRPSYIAGLDIV 201 >gi|229145137|ref|ZP_04273529.1| uridine kinase [Bacillus cereus BDRD-ST24] gi|229150750|ref|ZP_04278964.1| uridine kinase [Bacillus cereus m1550] gi|228632837|gb|EEK89452.1| uridine kinase [Bacillus cereus m1550] gi|228638335|gb|EEK94773.1| uridine kinase [Bacillus cereus BDRD-ST24] Length = 186 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 43/219 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59 N IS + G GKTT LK + T + + G Sbjct: 3 NKTKIISIAAVSGGGKTTITERLKHKFKNSKALYFDSYTFDNSPADICKWI-----DDGA 57 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + ++ +E +I+ ++ I+ D +AY Sbjct: 58 NYDEWVLTPLIHD------IEQLIQNNTLDYIIV------DYPFAY-------------- 91 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178 L + + D TI +D P+DI + R R + +D D+ + R+ +L Sbjct: 92 LNSEMRKFI--DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYL 146 Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + +P+ I+D + S + I + V EL ++ V Sbjct: 147 EAIHTVKPNSDIILDGSLSVSEI---INHAVEELGRREV 182 >gi|196248102|ref|ZP_03146804.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus sp. G11MC16] gi|196212886|gb|EDY07643.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus sp. G11MC16] Length = 371 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 19/37 (51%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 M G F + G G GKTT + L+ F++ + V+ Sbjct: 37 MERGKFYTLLGPSGCGKTTILRLIAGFIEPTDGTVYF 73 >gi|157364500|ref|YP_001471267.1| cytidylate kinase [Thermotoga lettingae TMO] gi|166987624|sp|A8F7R9|KCY_THELT RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|157315104|gb|ABV34203.1| cytidylate kinase [Thermotoga lettingae TMO] Length = 223 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 38/245 (15%), Positives = 72/245 (29%), Gaps = 60/245 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKR------------------FLQRKNYDVH------ 36 MN I+ +G G+GK++ L+ + +L K Sbjct: 1 MNR-FLIAIDGPAGSGKSSVAKLVAQKMNMNYLDTGAMYRAVALYLHSKGLSAKDDLKKH 59 Query: 37 ---VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL 93 + E + V E G A A + + + R GK + Sbjct: 60 LAEIDIEYIDGELYLNKKKVSDEIRSSEAGKLASDFATIPAVRERLTQIQRHICQNGKFV 119 Query: 94 LCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL 153 + E + L D I L +RV+ R+ Sbjct: 120 V-------------EGRDIGTVVL----------PEADVKIFLTASFK---ERVRRRFEE 153 Query: 154 RESACLDYFERKDVMIHEKRRQIF---LDIARNQP-DRCHIVD-SAHSFQSVATNILNIV 208 ++ ++ +D+ K R IA +P + ++D ++ VA I I Sbjct: 154 LKAKNMN-LTMEDIADQIKIRDRQDSSRSIAPLKPAEDAIVIDTTSKDINEVADEICQIA 212 Query: 209 WELVQ 213 + ++ Sbjct: 213 FRRIK 217 >gi|115376949|ref|ZP_01464169.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella aurantiaca DW4/3-1] gi|310820586|ref|YP_003952944.1| deoxynucleoside kinase family protein [Stigmatella aurantiaca DW4/3-1] gi|115366060|gb|EAU65075.1| deoxyguanosine kinase/deoxyadenosine kinase subunit [Stigmatella aurantiaca DW4/3-1] gi|309393658|gb|ADO71117.1| Deoxynucleoside kinase family protein [Stigmatella aurantiaca DW4/3-1] Length = 254 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 27/169 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F++ G GAGKTT L+ + ++ + EP + L + Sbjct: 51 RFVALAGNIGAGKTTAAKLISQCF---GFE--LFDEP-------VIDNRFLKDYYADMRR 98 Query: 65 EAEAIV--FAAARLDHVENVIRPALMEGKILLCDR--FLDSSY--AYQGERDSSQHLFLD 118 + + F R++H +I + DR + D Y + LD Sbjct: 99 WSFTLQLEFLIRRVEH-HELIHSVRKS---CVQDRTLYEDPEIFAKYLHGLGHLTNAELD 154 Query: 119 ----SLQEISVQEVMPDCTIILDL-PVDIGLKRVQNRYSLRESACLDYF 162 Q +S + PD I ++ VD+ L+R++ R E D F Sbjct: 155 LYYEYFQRLSRSILPPDKVICFEVGTVDVLLERIRTRGRAEEKGIQDQF 203 >gi|74002089|ref|XP_863102.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 5 [Canis familiaris] Length = 637 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 60 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 154 FFEVFVDAPLHVCEQR 169 >gi|46094058|ref|NP_005434.4| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo sapiens] gi|23831324|sp|O43252|PAPS1_HUMAN RecName: Full=Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1; Short=PAPS synthase 1; Short=PAPSS 1; AltName: Full=Sulfurylase kinase 1; Short=SK 1; Short=SK1; Includes: RecName: Full=Sulfate adenylyltransferase; AltName: Full=ATP-sulfurylase; AltName: Full=Sulfate adenylate transferase; Short=SAT; Includes: RecName: Full=Adenylyl-sulfate kinase; AltName: Full=3'-phosphoadenosine-5'-phosphosulfate synthase; AltName: Full=APS kinase; AltName: Full=Adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenylylsulfate 3'-phosphotransferase gi|3378101|gb|AAC28429.1| bifunctional ATP sulfurylase/adenosine 5'-phosphosulfate kinase [Homo sapiens] gi|7211186|gb|AAF40235.1| 3'-phosphoadenosine 5'-phosphosulfate synthetase [Homo sapiens] gi|30047099|gb|AAH50627.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo sapiens] gi|48146173|emb|CAG33309.1| PAPSS1 [Homo sapiens] gi|119626615|gb|EAX06210.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Homo sapiens] gi|158259009|dbj|BAF85463.1| unnamed protein product [Homo sapiens] Length = 624 Score = 39.2 bits (91), Expect = 0.38, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|326423803|ref|NP_760099.2| signal recognition particle-docking protein FtsY [Vibrio vulnificus CMCP6] gi|319999171|gb|AAO09626.2| signal recognition particle-docking protein FtsY [Vibrio vulnificus CMCP6] Length = 395 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 198 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 253 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 254 TGADSASVIYDAIEAAKARGVDVVIAD 280 >gi|317475400|ref|ZP_07934664.1| hypothetical protein HMPREF1016_01646 [Bacteroides eggerthii 1_2_48FAA] gi|316908428|gb|EFV30118.1| hypothetical protein HMPREF1016_01646 [Bacteroides eggerthii 1_2_48FAA] Length = 348 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 97 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 150 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 151 ---HEMGLIDSSTYFRALACDHFRRIKKN------------------AYTIVKSNAVNAL 189 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 190 DDAERIIATEDVKPD-VVFFDMP 211 >gi|296435980|gb|ADH18154.1| cytidylate kinase [Chlamydia trachomatis G/9768] gi|297140341|gb|ADH97099.1| cytidylate kinase [Chlamydia trachomatis G/9301] Length = 216 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|228958786|ref|ZP_04120497.1| uridine kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229044250|ref|ZP_04191923.1| uridine kinase [Bacillus cereus AH676] gi|229109959|ref|ZP_04239539.1| uridine kinase [Bacillus cereus Rock1-15] gi|296503085|ref|YP_003664785.1| uridine kinase [Bacillus thuringiensis BMB171] gi|228673480|gb|EEL28744.1| uridine kinase [Bacillus cereus Rock1-15] gi|228725075|gb|EEL76359.1| uridine kinase [Bacillus cereus AH676] gi|228800883|gb|EEM47789.1| uridine kinase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296324137|gb|ADH07065.1| uridine kinase [Bacillus thuringiensis BMB171] Length = 189 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 43/219 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGV 59 N IS + G GKTT LK + T + + G Sbjct: 6 NKTKIISIAAVSGGGKTTITERLKHKFKNSKALYFDSYTFDNSPADICKWI-----DDGA 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + ++ +E +I+ ++ I+ D +AY Sbjct: 61 NYDEWVLTPLIHD------IEQLIQNNTLDYIIV------DYPFAY-------------- 94 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFL 178 L + + D TI +D P+DI + R R + +D D+ + R+ +L Sbjct: 95 LNSEMRKFI--DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYL 149 Query: 179 DIARN-QPDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 + +P+ I+D + S + I + V EL ++ V Sbjct: 150 EAIHTVKPNSDIILDGSLSVSEI---INHAVEELGRREV 185 >gi|212690783|ref|ZP_03298911.1| hypothetical protein BACDOR_00270 [Bacteroides dorei DSM 17855] gi|237708168|ref|ZP_04538649.1| guanylate kinase [Bacteroides sp. 9_1_42FAA] gi|237723701|ref|ZP_04554182.1| guanylate kinase [Bacteroides sp. D4] gi|212666660|gb|EEB27232.1| hypothetical protein BACDOR_00270 [Bacteroides dorei DSM 17855] gi|229437912|gb|EEO47989.1| guanylate kinase [Bacteroides dorei 5_1_36/D4] gi|229457721|gb|EEO63442.1| guanylate kinase [Bacteroides sp. 9_1_42FAA] Length = 189 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 5/101 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV- 59 M +G I F G+GK+T I+ L ++ + T P + LS Sbjct: 1 MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF 60 Query: 60 DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96 + A E + V+ ++ + L G+ ++ D Sbjct: 61 KQRIANDEFLEYEEVYENRFYGTLKAQVEKQLEAGQNVIFD 101 >gi|196042219|ref|ZP_03109500.1| hypothetical protein BC059799_2905 [Bacillus cereus NVH0597-99] gi|229091945|ref|ZP_04223133.1| hypothetical protein bcere0021_27400 [Bacillus cereus Rock3-42] gi|196026937|gb|EDX65563.1| hypothetical protein BC059799_2905 [Bacillus cereus NVH0597-99] gi|228691426|gb|EEL45186.1| hypothetical protein bcere0021_27400 [Bacillus cereus Rock3-42] Length = 282 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIIEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|170288554|ref|YP_001738792.1| ABC transporter related [Thermotoga sp. RQ2] gi|170176057|gb|ACB09109.1| ABC transporter related [Thermotoga sp. RQ2] Length = 258 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 16/35 (45%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 G I G GAGK+T + + L+ + ++ Sbjct: 25 QKGELIVILGPNGAGKSTLLKCIAGILKCQGVEIF 59 >gi|153835089|ref|ZP_01987756.1| cell division protein FtsY [Vibrio harveyi HY01] gi|148868439|gb|EDL67547.1| cell division protein FtsY [Vibrio harveyi HY01] Length = 410 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 213 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 268 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 269 TGADSASVIYDAIEAAKARGVDVVIAD 295 >gi|74002093|ref|XP_863147.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 7 [Canis familiaris] Length = 627 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 60 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 154 FFEVFVDAPLHVCEQR 169 >gi|17227602|ref|NP_484150.1| guanylate kinase [Nostoc sp. PCC 7120] gi|20532108|sp|Q8Z0I7|KGUA_ANASP RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|17135084|dbj|BAB77630.1| guanylate kinase [Nostoc sp. PCC 7120] Length = 199 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 55/175 (31%), Gaps = 28/175 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 SG I G G GK T + L + Y V TR P + + + +E Sbjct: 19 SGKLIILTGPSGVGKGTLMRSLLQRHPELYYSVSATTRPPRPGEVNGESYYFVSRSKFEE 78 Query: 62 FGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A+ E + +A + + + GK+++ + L Sbjct: 79 LIAQGE-FLESAEFAGNYYGTPREAVLNQVQSGKLVVL------------------EIEL 119 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 ++I +I + LP + R++ R E A +R I Sbjct: 120 AGARQIRTSFPE-ALSIFI-LPPSFEELENRIRGRGQDSEEAIARRLQRAKEEIQ 172 >gi|325299639|ref|YP_004259556.1| hypothetical protein Bacsa_2546 [Bacteroides salanitronis DSM 18170] gi|324319192|gb|ADY37083.1| hypothetical protein Bacsa_2546 [Bacteroides salanitronis DSM 18170] Length = 253 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 1 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 54 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 55 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 93 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 94 DDAERMIATEDVKPD-VVFFDMP 115 >gi|297674114|ref|XP_002815085.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1-like [Pongo abelii] Length = 624 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|291557827|emb|CBL34944.1| ABC-type multidrug transport system, ATPase and permease components [Eubacterium siraeum V10Sc8a] Length = 583 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 14/109 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL--QRKNYDV------HVTREPGGTPAAEAARHV 53 SG I+ G G GKTT I+LL RF + V VTR+ + Sbjct: 369 KSGQQIAIVGPTGCGKTTIINLLMRFYDTDKGGISVDGNNIKDVTRDSLRLSYGMVLQET 428 Query: 54 LLSCGVDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + G E + AAA+ H + I+ ++ D Sbjct: 429 WIFEGTVRENIAYGKQDATEEEIVAAAKAAHCHSFIKRMKDGYDTIISD 477 >gi|156101594|ref|XP_001616490.1| XPA binding protein 1 [Plasmodium vivax SaI-1] gi|148805364|gb|EDL46763.1| XPA binding protein 1, putative [Plasmodium vivax] Length = 479 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 13/102 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54 I G+ G+GKTT++ L +L+ + V + P ++ + ++ Sbjct: 189 IVI-GMAGSGKTTYVGSLYNYLKVEKKKKVYTMNLDPAVKYVQYPVNIDIRDSIKYHEIM 247 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + GA + A R D V ++ + ++ D Sbjct: 248 KEYKLGPNGAIMTCLNLFATRFDKVIEILEKRKNKLHYIIVD 289 >gi|118591327|ref|ZP_01548725.1| GTP-binding signal recognition particle (SRP54) G-domain:ATP/GTP-binding site motif A (P-loop):AAA [Stappia aggregata IAM 12614] gi|118435999|gb|EAV42642.1| GTP-binding signal recognition particle (SRP54) G-domain:ATP/GTP-binding site motif A (P-loop):AAA [Stappia aggregata IAM 12614] Length = 474 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 16/139 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + L+ + V + G T A A L + GAE A Sbjct: 278 GVNGTGKTTTIGKLSQKLRSEGKTVMLAA--GDTFRAAAVEQ--LKIWGERTGAEVIARD 333 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE----ISVQ 126 A + ++ A +G +L +D+ R ++ +D L++ I Sbjct: 334 TGADAAGLAYDAMKEAKAKGVDVLL---VDT-----AGRLQNKAELMDELEKVIRVIKKH 385 Query: 127 EVMPDCTIILDLPVDIGLK 145 + T++L L G Sbjct: 386 DPEAPHTVLLTLDATTGQN 404 >gi|58221327|gb|AAW68306.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|193735106|gb|ACF20062.1| regulatory protein [Neisseria gonorrhoeae] Length = 140 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 108 -AGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|2673862|emb|CAA71413.1| PAPS sunthetase [Homo sapiens] Length = 624 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|15901195|ref|NP_345799.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae TIGR4] gi|116516042|ref|YP_816643.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae D39] gi|148985709|ref|ZP_01818863.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP3-BS71] gi|148989456|ref|ZP_01820815.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP6-BS73] gi|148993104|ref|ZP_01822698.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|148997608|ref|ZP_01825213.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|149002705|ref|ZP_01827637.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP14-BS69] gi|149007003|ref|ZP_01830672.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|149011575|ref|ZP_01832771.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|168484610|ref|ZP_02709562.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae CDC1873-00] gi|168490375|ref|ZP_02714574.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP195] gi|168493248|ref|ZP_02717391.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae CDC3059-06] gi|168575800|ref|ZP_02721715.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae MLV-016] gi|169833157|ref|YP_001694783.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|221232013|ref|YP_002511165.1| putative ABC transport system ATP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225859109|ref|YP_002740619.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae 70585] gi|237822293|ref|ZP_04598138.1| ABC transporter ATP-binding protein [Streptococcus pneumoniae CCRI 1974M2] gi|307067994|ref|YP_003876960.1| antimicrobial peptide ABC transporter ATPase [Streptococcus pneumoniae AP200] gi|14972824|gb|AAK75439.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae TIGR4] gi|116076618|gb|ABJ54338.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae D39] gi|147756663|gb|EDK63704.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP11-BS70] gi|147759316|gb|EDK66309.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP14-BS69] gi|147761307|gb|EDK68273.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP18-BS74] gi|147764006|gb|EDK70938.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP19-BS75] gi|147922190|gb|EDK73312.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP3-BS71] gi|147924999|gb|EDK76080.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP6-BS73] gi|147928305|gb|EDK79322.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP9-BS68] gi|168995659|gb|ACA36271.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae Hungary19A-6] gi|172042179|gb|EDT50225.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae CDC1873-00] gi|183571304|gb|EDT91832.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae SP195] gi|183576785|gb|EDT97313.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae CDC3059-06] gi|183578296|gb|EDT98824.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae MLV-016] gi|220674473|emb|CAR69033.1| putative ABC transport system ATP-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225721565|gb|ACO17419.1| ABC transporter, ATP-binding protein [Streptococcus pneumoniae 70585] gi|301794388|emb|CBW36820.1| putative ABC transport system ATP-binding protein [Streptococcus pneumoniae INV104] gi|301800217|emb|CBW32832.1| putative ABC transport system ATP-binding protein [Streptococcus pneumoniae OXC141] gi|306409531|gb|ADM84958.1| ABC-type antimicrobial peptide transport system, ATPase component [Streptococcus pneumoniae AP200] gi|332074672|gb|EGI85146.1| ABC transporter family protein [Streptococcus pneumoniae GA17545] gi|332074922|gb|EGI85394.1| ABC transporter family protein [Streptococcus pneumoniae GA41301] Length = 246 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 + G FIS GI G+GK+T + + L+ + +V + Sbjct: 35 SRGEFISILGISGSGKSTLLKCISSLLEPTSGEVIL 70 >gi|4895138|gb|AAD32745.1| MmcU [Streptomyces lavendulae] Length = 160 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 7/44 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G GAGKTT L L+ + V V +A R +L Sbjct: 19 GPPGAGKTTIARALAERLRERGRRVEVL-------DGDATRALL 55 >gi|326385089|ref|ZP_08206759.1| daunorubicin resistance ABC transporter ATPase subunit [Gordonia neofelifaecis NRRL B-59395] gi|326196174|gb|EGD53378.1| daunorubicin resistance ABC transporter ATPase subunit [Gordonia neofelifaecis NRRL B-59395] Length = 521 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 60/204 (29%), Gaps = 37/204 (18%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG---- 58 G + G GAGKTT +++L L+ V AA R ++L+ Sbjct: 226 KGKIFALLGPNGAGKTTVVNMLCTLLRPDGGSASVNGHDVVEDAAGVRRSIMLTGQFAAL 285 Query: 59 VDEFGAEAEAIVF----------AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 + ++F A R + + K + G+ Sbjct: 286 DESLTGRENLVLFGRLLGLAKSAAKMRAEELLETFSLVAAADKKV-------------GQ 332 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 +D I+ V + LD GL R + ++ V Sbjct: 333 YSGGMRRRID----IACGLVTEPKVVFLD-EPTTGLD---PRSRQDVWSLVEKLREDGVT 384 Query: 169 IHEKRRQIFLDIARNQPDRCHIVD 192 + + +L+ A D ++D Sbjct: 385 VLLTTQ--YLEEADMLSDHIVVID 406 >gi|323188585|gb|EFZ73870.1| hypothetical protein ECRN5871_3004 [Escherichia coli RN587/1] Length = 232 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNKLASRMPTEHIYLGQSSGRIGEWILQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225 Query: 207 IVWELV 212 + + Sbjct: 226 AIHAAL 231 >gi|296436907|gb|ADH19077.1| cytidylate kinase [Chlamydia trachomatis G/11222] Length = 216 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|288932506|ref|YP_003436566.1| hypothetical protein Ferp_2160 [Ferroglobus placidus DSM 10642] gi|288894754|gb|ADC66291.1| protein of unknown function ATP binding protein [Ferroglobus placidus DSM 10642] Length = 233 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 43/234 (18%), Positives = 71/234 (30%), Gaps = 52/234 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTR-EPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G G+GK+T +L+ YDV V +P P EA R++ +E + + Sbjct: 7 GPAGSGKSTFAKEFSTYLREGGYDVKVVNLDPATDPIYEADRNLRDFIKTEEVMKKFKLG 66 Query: 70 VFAAA--RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 + A ++ ++ ++EG+ ++ D D ++ L + Sbjct: 67 INGALIKSMEMSLEILDEVIVEGEYVIYD--TPGQMELFLYTD-FGEKLVEKLNGFTTGL 123 Query: 128 VM----------------------------PDCTIIL--DLPVDIGLKRVQNRYSLRESA 157 + P TI DL + LK V+ R S E Sbjct: 124 FLIDSCLATSHEKFAACVAQAVVVTLRFSIPFVTIFTKSDLCEALSLKDVKKRISESEGM 183 Query: 158 CLDYFERKDVMIHEKRRQIFLDIAR--NQPDRCHIVDS--AHSFQSVATNILNI 207 + E FL P R + S F V I I Sbjct: 184 VAEVLEN------------FLRFVDVTTLPQRIVRISSKDRRGFDEVFGVIHEI 225 >gi|225711370|gb|ACO11531.1| Deoxynucleoside kinase [Caligus rogercresseyi] Length = 247 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 22/160 (13%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFGAEA 66 EG G+GK+T I + + D+ V +EP + + L+ + Sbjct: 34 VEGPTGSGKSTFIEMFRSR-----PDIFVVQEPLSSWMDVNGTDLFGLMYRDPQRWSGAF 88 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-----------SYAYQGERDSSQHL 115 + + +RL V P I + +R + S + + Sbjct: 89 QLHA-SLSRLRSVTEK-TPWGKR--IRILERSIYSQRYTFLEHLIKTEVMAKAETALMDK 144 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 + D + + +++ PD I L D+ +R+ R E Sbjct: 145 WFDFMVKRFERQMKPDLIIYLRGSNDVFKERILKRGRTEE 184 >gi|240120142|ref|NP_001155275.1| radial spoke protein AK58 [Ciona intestinalis] gi|237769619|dbj|BAH59278.1| radial spoke protein AK58 [Ciona intestinalis] Length = 485 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 37/243 (15%), Positives = 68/243 (27%), Gaps = 61/243 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTRE--PGGTPAAEAARHVLLSCGVDE 61 I G G+GK+ L + K DV + +E T EA R + Sbjct: 271 IVLIGATGSGKSCIAQRLAT--KYKIVDVSCGTLLKEQVANNTKMGEALREFVSGGERVP 328 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A RL ++ R ++ G L D + Sbjct: 329 NSLVTKV---VADRLMQLDASSRGWVLHGY----------------------PLTRDQAE 363 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--------------RESACLDYFERKDV 167 + + P+ D+P D ++R+ R + R + + Sbjct: 364 GLFDAGLQPNRIYFFDIPDDCVIERLCYRITDPISGERYHTLYNPPRSNDVKQRCLQNYK 423 Query: 168 MIHEKRRQ---IFLDIARNQPDRC-----HIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 RQ + A D +++ Q+V + + + V+PL Sbjct: 424 DSQNNVRQLLNEYHSYAEELTDYYSEEGALRINADQDPQTVFEYVESTL-------VNPL 476 Query: 220 SSK 222 Sbjct: 477 PGH 479 >gi|190573662|ref|YP_001971507.1| hypothetical protein Smlt1677 [Stenotrophomonas maltophilia K279a] gi|190011584|emb|CAQ45203.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 187 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 32/171 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T L P +E A L G E + A+ + AA Sbjct: 36 GAGKSTLSQQLAA-------------NPRHVLISEDAWLATLHPG--EIHSVADYLQRAA 80 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 + + +R L G ++ D F ++ A +G + + ++ Sbjct: 81 TLRSVLTDHLRTLLRAGVSVVLD-FPFNTPATRGWAREV-FSPVGAAHQLH--------- 129 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 LD+ ++ R++ R + E F+ D + R F+ A + Sbjct: 130 -FLDIADEVCKARLRARNACGEHP----FQASDEEFEQITRH-FVAPAAEE 174 >gi|2853267|gb|AAC39894.1| PAPS synthase [Homo sapiens] Length = 623 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|76789188|ref|YP_328274.1| cytidylate kinase [Chlamydia trachomatis A/HAR-13] gi|123606859|sp|Q3KLP6|KCY_CHLTA RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|76167718|gb|AAX50726.1| cytidylate kinase [Chlamydia trachomatis A/HAR-13] Length = 216 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|74002083|ref|XP_851070.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 2 [Canis familiaris] Length = 625 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 60 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 154 FFEVFVDAPLHVCEQR 169 >gi|15618168|ref|NP_224453.1| adenylate kinase [Chlamydophila pneumoniae CWL029] gi|15835779|ref|NP_300303.1| adenylate kinase [Chlamydophila pneumoniae J138] gi|16752794|ref|NP_445062.1| adenylate kinase [Chlamydophila pneumoniae AR39] gi|33241586|ref|NP_876527.1| adenylate kinase [Chlamydophila pneumoniae TW-183] gi|6647540|sp|Q9Z8U0|KAD_CHLPN RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|4376519|gb|AAD18397.1| Adenylate Kinase [Chlamydophila pneumoniae CWL029] gi|4760698|dbj|BAA77386.1| adenylate kinase [Chlamydophila pneumoniae] gi|7189434|gb|AAF38344.1| adenylate kinase [Chlamydophila pneumoniae AR39] gi|8978617|dbj|BAA98454.1| adenylate kinase [Chlamydophila pneumoniae J138] gi|33236094|gb|AAP98184.1| adenylate kinase [Chlamydophila pneumoniae TW-183] Length = 213 Score = 39.2 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 28/154 (18%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G +FI G G+GK T L + T + R ++ Sbjct: 1 MTKGSVFIIM-GPPGSGKGTQSQYLANRI---GLPHIST--------GDLLRAIIREGTP 48 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLF 116 + A+A A D V +++ L K + D F + + Sbjct: 49 NGLKAKAYLDKGAFVPSDFVWEILKEKLQSQACSKGCIIDGFPRTL----DQAHLLDSFL 104 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 +D + I L++ D LKRV +R Sbjct: 105 MDVHSNYT--------VIFLEISEDEILKRVCSR 130 >gi|313667376|ref|YP_004047660.1| regulatory protein PilA [Neisseria lactamica ST-640] gi|313004838|emb|CBN86263.1| regulatory protein PilA [Neisseria lactamica 020-06] Length = 502 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 309 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 363 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 364 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 414 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 415 AMPDAPHEIIVVLD 428 >gi|315054905|ref|XP_003176827.1| multidrug resistance protein 1 [Arthroderma gypseum CBS 118893] gi|311338673|gb|EFQ97875.1| multidrug resistance protein 1 [Arthroderma gypseum CBS 118893] Length = 1269 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 4 GLFISFEGIEGAGKTTHISLLKRF 27 G FI+F G G GK+T I+LL RF Sbjct: 1048 GKFIAFVGPSGCGKSTMINLLCRF 1071 >gi|255322547|ref|ZP_05363692.1| adenylate kinase [Campylobacter showae RM3277] gi|255300455|gb|EET79727.1| adenylate kinase [Campylobacter showae RM3277] Length = 188 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEAARHVLLS 56 M I G G+GKTT SL+ + + + D+ G+ + + Sbjct: 1 MKKLFLII--GAPGSGKTTDASLIAQEDAKFAHFSTGDLLRAEVASGSELGKLIDGFISK 58 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + AIV A I+ + ++ D + S E+ + Sbjct: 59 GNLVPLDVVVNAIVSA----------IKSSEKSN--VIIDGYPRS-----VEQMTELDKV 101 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMIHEKR 173 L + EI+++ I +D+ + +RV R + + + + E Sbjct: 102 LAAQNEIALKG-----VIEVDVSEAVARERVLGRARGADDNNEVFNNRM-KVYLEPIEAI 155 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R+ + + H+V+ + + + ++ +V L Sbjct: 156 RKFY-----KEKGLLHVVNGERAIEPIVADVKALVNSL 188 >gi|227497288|ref|ZP_03927520.1| ABC superfamily ATP binding cassette transporter, ABC protein [Actinomyces urogenitalis DSM 15434] gi|226833159|gb|EEH65542.1| ABC superfamily ATP binding cassette transporter, ABC protein [Actinomyces urogenitalis DSM 15434] Length = 180 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 17/25 (68%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 + G F++ EG GAGK+T +++L Sbjct: 29 IRQGDFVAIEGPSGAGKSTLLNVLA 53 >gi|225619758|ref|YP_002721015.1| cytidylate kinase [Brachyspira hyodysenteriae WA1] gi|225214577|gb|ACN83311.1| cytidylate kinase [Brachyspira hyodysenteriae WA1] Length = 223 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 16/28 (57%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD 34 I+ +G GAGK+T LL + L K D Sbjct: 8 ITLDGPSGAGKSTIAKLLAKKLSFKYLD 35 >gi|209545242|ref|YP_002277471.1| Sulfate adenylyltransferase., Adenylyl-sulfate kinase [Gluconacetobacter diazotrophicus PAl 5] gi|209532919|gb|ACI52856.1| Sulfate adenylyltransferase., Adenylyl-sulfate kinase [Gluconacetobacter diazotrophicus PAl 5] Length = 626 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 24/116 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T + L + D+ +L G A+ Sbjct: 454 GLPGAGKSTIARAAESRLFAQGIDI-----------------SVLDGDTLRAGLCADLGF 496 Query: 71 FAAARLDHVEN---VIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDS 119 A R ++V V R G+++ + R D A Q D + +F+D+ Sbjct: 497 SEADRTENVRRAAAVARILAETGQVVLVALISPRTADRDLARQIVGDGFREIFIDA 552 >gi|152991239|ref|YP_001356961.1| guanylate kinase [Nitratiruptor sp. SB155-2] gi|151423100|dbj|BAF70604.1| guanylate kinase [Nitratiruptor sp. SB155-2] Length = 207 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 8/101 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G + G GAGK+T I + + + + T P E +E Sbjct: 3 QKGALLVISGPSGAGKSTLIKTIVEHIPDVYFSISTTTRP--KRPGEVDGKDYYFVSKEE 60 Query: 62 FGAEAEAIVFA--AARLDHVE----NVIRPALMEGKILLCD 96 F E EA +F A + ++ A+ EGK++L D Sbjct: 61 FEKEIEAGMFLEWANVHGNYYGTSLRPVKQAVEEGKLVLFD 101 >gi|119719602|ref|YP_920097.1| hypothetical protein Tpen_0692 [Thermofilum pendens Hrk 5] gi|119524722|gb|ABL78094.1| conserved hypothetical protein [Thermofilum pendens Hrk 5] Length = 452 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 18/124 (14%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T + R L+ V R P P + LL V F + + + Sbjct: 135 GAGKSTVSRRVARVLRELGVRFVVVRHP--MPYGD-----LLKSAVQRFASLEDLERYNC 187 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV---MP 130 + P + G ++ + Y+ ++ L + + P Sbjct: 188 TIEE--REEYEPHIESGNVV------YAGVDYEAILRRAEEEADLVLWDGGNNDWPFYKP 239 Query: 131 DCTI 134 D I Sbjct: 240 DLYI 243 >gi|77919469|ref|YP_357284.1| hypothetical protein Pcar_1873 [Pelobacter carbinolicus DSM 2380] gi|77545552|gb|ABA89114.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 521 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 67/205 (32%), Gaps = 42/205 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTR-EPGGTPAAEAARHVLLSCGVDEFGAEA--E 67 G+ G GK+T L L + R E G P E + +A + Sbjct: 346 GLMGVGKSTIARELATPLGAELLSSDALRKELAGIPQQERHHEAFGEGIYSQSSRQATYD 405 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A++ A L G+ ++ +D+S+A + + Sbjct: 406 ALLTGA----------LATLETGRPVI----VDASFA--------DEKERKRFHAAANRA 443 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN---- 183 P T+++ +I L+R+ +R + + A R ++ ARN Sbjct: 444 GYPVWTVLVTCDREIALQRLDDRQAKGKDASDGR------------RALYDQQARNFDPV 491 Query: 184 -QPDRCHIVDSAHSFQSVATNILNI 207 + R VD SV +LN Sbjct: 492 KEATRVLRVDGNADTASVIDELLNA 516 >gi|27573159|gb|AAO19979.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 311 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++A Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQA-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|7211188|gb|AAF40236.1|AF105227_1 3'-phosphoadenosine 5'-phosphosulfate synthetase [Homo sapiens] Length = 624 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|319644344|ref|ZP_07998817.1| TraA protein [Bacteroides sp. 3_1_40A] gi|317384141|gb|EFV65115.1| TraA protein [Bacteroides sp. 3_1_40A] Length = 253 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 36/145 (24%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDV--HVTREPGGTPAAEAARHVL 54 M++ +F++F +G G GK+T +L +L K Y+V +P + R Sbjct: 1 MSNEIFVAFATQKG--GIGKSTVTALAANYLHNVKGYNVAVIDCDDPQHSIHGLRERETK 58 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 L E++ F A DH V + AY + +SQ Sbjct: 59 LID---------ESLYFKALACDHFRKVRKN------------------AYPVIKSNSQD 91 Query: 115 LFLDSLQEISVQEVMPDCTIILDLP 139 D+ + + +EV PD D+P Sbjct: 92 ALDDADRMLVSEEVKPDIVF-FDMP 115 >gi|283784204|ref|YP_003364069.1| shikimate kinase II [Citrobacter rodentium ICC168] gi|282947658|emb|CBG87213.1| shikimate kinase II [Citrobacter rodentium ICC168] Length = 162 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 133 TIILDLPVDIGLKRVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L PV I + R+ +LR + + + ++R ++ + A I Sbjct: 78 VIYLRAPVSILVNRLAASPEEALRPALTGKPLSEEVAEVLQQRDALYREAAH------FI 131 Query: 191 VDSAHSFQSVATNILNIVWELVQKR 215 VD+ S V + I + + + VQ++ Sbjct: 132 VDATGSPDQVISEIRHALAQTVQRK 156 >gi|260567292|ref|ZP_05837762.1| uridine kinase [Brucella suis bv. 4 str. 40] gi|260156810|gb|EEW91890.1| uridine kinase [Brucella suis bv. 4 str. 40] Length = 218 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 27 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGL 86 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 87 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 139 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 140 NYLLLDREPWSRLAPFFDMTVYLDVPFAVLERRLTDR 176 >gi|212223400|ref|YP_002306636.1| ABC-type iron(III)-siderophore transport system, ATPase component [Thermococcus onnurineus NA1] gi|212008357|gb|ACJ15739.1| ABC-type iron(III)-siderophore transport system, ATPase component [Thermococcus onnurineus NA1] Length = 258 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G FI G GAGK+T + + L + +V + R P E AR + Sbjct: 29 GEFIVILGPNGAGKSTLLRCIAGILHCEGVEV-LERPIESYPRNELARVL 77 >gi|170077164|ref|YP_001733802.1| putative kinase [Synechococcus sp. PCC 7002] gi|169884833|gb|ACA98546.1| putative kinase [Synechococcus sp. PCC 7002] Length = 174 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 39/174 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGAEAEAI 69 G G+GK+T L++ + + + +A R + G+ G EAI Sbjct: 14 GAPGSGKSTFAQWLRQTMPQA-----------CLISTDAIRVQLYGDPGIQGDGPTIEAI 62 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS--SQHLFLDSLQEISVQE 127 V + A+ +GK ++ D++ +Q R + LD L Sbjct: 63 ---------VLWRLHQAIAQGKPVI----YDATNCHQPWRLDFLKKCPPLDWLAW----- 104 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 L P+ I L R Q R ++ R + ++ FL+I Sbjct: 105 -------YLACPLGICLARNQRRSRQVPPEIIEKMIRDLEAAPPQAQEGFLEII 151 >gi|153971636|ref|YP_001393154.1| putative conjugative transfer protein TraD [Vibrio vulnificus] gi|152955137|emb|CAL25488.1| putative conjugative transfer protein TraD [Vibrio vulnificus] Length = 699 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 5/126 (3%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-GAE 65 +G G+GK+ + L R+++++ V + + + ++ +LL+ + + Sbjct: 203 IDGTTGSGKSVMLRKLLRWIRKRGDKAIVYDKGCTFTSKFFDPSQDILLNPFDERCANWD 262 Query: 66 AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +++ N + P EG + R + SS AY+ +D+ L I Sbjct: 263 VWCDAKEAPDFENIANALIPQHGEGDPFWVDSARTIFSSAAYRMSQDNKPCSTARLLSLI 322 Query: 124 SVQEVM 129 E+ Sbjct: 323 LTSEIE 328 >gi|90419546|ref|ZP_01227456.1| adenylylsulfate kinase apsK [Aurantimonas manganoxydans SI85-9A1] gi|90336483|gb|EAS50224.1| adenylylsulfate kinase apsK [Aurantimonas manganoxydans SI85-9A1] Length = 208 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 50/151 (33%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ GAGK+T +L+++ L + + LL G Sbjct: 35 IWFTGLSGAGKSTIANLVEKSLFARGRHTY-----------------LLDGDNLRHGLNR 77 Query: 67 EAIVFAAARLDHVENVIRPA---LMEGKILL--------CDRFLDSSYAYQGERDSSQHL 115 + A R++++ V A + G I+L DR Sbjct: 78 DLGFSEADRVENIRRVAEAARLFVDAGLIVLASFISPYRSDR-------RMARSLFEDGE 130 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 F++ + +D P++I +R Sbjct: 131 FIE---------------VFVDTPLEIAEQR 146 >gi|29375334|ref|NP_814488.1| deoxynucleoside kinase [Enterococcus faecalis V583] gi|227517704|ref|ZP_03947753.1| deoxyguanosine kinase [Enterococcus faecalis TX0104] gi|227554855|ref|ZP_03984902.1| deoxyguanosine kinase [Enterococcus faecalis HH22] gi|229546576|ref|ZP_04435301.1| deoxyguanosine kinase [Enterococcus faecalis TX1322] gi|229548685|ref|ZP_04437410.1| deoxyguanosine kinase [Enterococcus faecalis ATCC 29200] gi|255971198|ref|ZP_05421784.1| deoxynucleoside kinase [Enterococcus faecalis T1] gi|255973821|ref|ZP_05424407.1| deoxynucleoside kinase [Enterococcus faecalis T2] gi|256617625|ref|ZP_05474471.1| deoxynucleoside kinase [Enterococcus faecalis ATCC 4200] gi|256761508|ref|ZP_05502088.1| deoxynucleoside kinase [Enterococcus faecalis T3] gi|256854394|ref|ZP_05559758.1| deoxynucleoside kinase [Enterococcus faecalis T8] gi|256957392|ref|ZP_05561563.1| deoxynucleoside kinase [Enterococcus faecalis DS5] gi|256959872|ref|ZP_05564043.1| deoxynucleoside kinase [Enterococcus faecalis Merz96] gi|256964425|ref|ZP_05568596.1| deoxynucleoside kinase [Enterococcus faecalis HIP11704] gi|257077611|ref|ZP_05571972.1| deoxynucleoside kinase [Enterococcus faecalis JH1] gi|257081003|ref|ZP_05575364.1| deoxynucleoside kinase [Enterococcus faecalis E1Sol] gi|257083665|ref|ZP_05578026.1| deoxynucleoside kinase [Enterococcus faecalis Fly1] gi|257086098|ref|ZP_05580459.1| deoxynucleoside kinase [Enterococcus faecalis D6] gi|257089165|ref|ZP_05583526.1| deoxynucleoside kinase [Enterococcus faecalis CH188] gi|257415308|ref|ZP_05592302.1| deoxynucleoside kinase [Enterococcus faecalis AR01/DG] gi|257418348|ref|ZP_05595342.1| deoxynucleoside kinase [Enterococcus faecalis T11] gi|257420998|ref|ZP_05597988.1| deoxynucleoside kinase [Enterococcus faecalis X98] gi|293385063|ref|ZP_06630897.1| deoxynucleoside kinase [Enterococcus faecalis R712] gi|293389334|ref|ZP_06633795.1| deoxynucleoside kinase [Enterococcus faecalis S613] gi|294779944|ref|ZP_06745325.1| deoxynucleoside kinase [Enterococcus faecalis PC1.1] gi|300862029|ref|ZP_07108109.1| deoxyguanosine kinase [Enterococcus faecalis TUSoD Ef11] gi|307269793|ref|ZP_07551123.1| deoxynucleoside kinase [Enterococcus faecalis TX4248] gi|307272552|ref|ZP_07553805.1| deoxynucleoside kinase [Enterococcus faecalis TX0855] gi|307274673|ref|ZP_07555845.1| deoxynucleoside kinase [Enterococcus faecalis TX2134] gi|307284499|ref|ZP_07564661.1| deoxynucleoside kinase [Enterococcus faecalis TX0860] gi|307289568|ref|ZP_07569512.1| deoxynucleoside kinase [Enterococcus faecalis TX0109] gi|307296370|ref|ZP_07576195.1| deoxynucleoside kinase [Enterococcus faecalis TX0411] gi|312900334|ref|ZP_07759645.1| deoxynucleoside kinase [Enterococcus faecalis TX0470] gi|312904242|ref|ZP_07763404.1| deoxynucleoside kinase [Enterococcus faecalis TX0635] gi|312906052|ref|ZP_07765065.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 512] gi|312909398|ref|ZP_07768254.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 516] gi|312953124|ref|ZP_07771973.1| deoxynucleoside kinase [Enterococcus faecalis TX0102] gi|29342794|gb|AAO80558.1| deoxynucleoside kinase [Enterococcus faecalis V583] gi|227074859|gb|EEI12822.1| deoxyguanosine kinase [Enterococcus faecalis TX0104] gi|227176024|gb|EEI56996.1| deoxyguanosine kinase [Enterococcus faecalis HH22] gi|229306201|gb|EEN72197.1| deoxyguanosine kinase [Enterococcus faecalis ATCC 29200] gi|229308321|gb|EEN74308.1| deoxyguanosine kinase [Enterococcus faecalis TX1322] gi|255962216|gb|EET94692.1| deoxynucleoside kinase [Enterococcus faecalis T1] gi|255966693|gb|EET97315.1| deoxynucleoside kinase [Enterococcus faecalis T2] gi|256597152|gb|EEU16328.1| deoxynucleoside kinase [Enterococcus faecalis ATCC 4200] gi|256682759|gb|EEU22454.1| deoxynucleoside kinase [Enterococcus faecalis T3] gi|256709954|gb|EEU24998.1| deoxynucleoside kinase [Enterococcus faecalis T8] gi|256947888|gb|EEU64520.1| deoxynucleoside kinase [Enterococcus faecalis DS5] gi|256950368|gb|EEU67000.1| deoxynucleoside kinase [Enterococcus faecalis Merz96] gi|256954921|gb|EEU71553.1| deoxynucleoside kinase [Enterococcus faecalis HIP11704] gi|256985641|gb|EEU72943.1| deoxynucleoside kinase [Enterococcus faecalis JH1] gi|256989033|gb|EEU76335.1| deoxynucleoside kinase [Enterococcus faecalis E1Sol] gi|256991695|gb|EEU78997.1| deoxynucleoside kinase [Enterococcus faecalis Fly1] gi|256994128|gb|EEU81430.1| deoxynucleoside kinase [Enterococcus faecalis D6] gi|256997977|gb|EEU84497.1| deoxynucleoside kinase [Enterococcus faecalis CH188] gi|257157136|gb|EEU87096.1| deoxynucleoside kinase [Enterococcus faecalis ARO1/DG] gi|257160176|gb|EEU90136.1| deoxynucleoside kinase [Enterococcus faecalis T11] gi|257162822|gb|EEU92782.1| deoxynucleoside kinase [Enterococcus faecalis X98] gi|291077741|gb|EFE15105.1| deoxynucleoside kinase [Enterococcus faecalis R712] gi|291081356|gb|EFE18319.1| deoxynucleoside kinase [Enterococcus faecalis S613] gi|294452993|gb|EFG21414.1| deoxynucleoside kinase [Enterococcus faecalis PC1.1] gi|295114040|emb|CBL32677.1| Deoxynucleoside kinases [Enterococcus sp. 7L76] gi|300848554|gb|EFK76311.1| deoxyguanosine kinase [Enterococcus faecalis TUSoD Ef11] gi|306496054|gb|EFM65638.1| deoxynucleoside kinase [Enterococcus faecalis TX0411] gi|306499382|gb|EFM68755.1| deoxynucleoside kinase [Enterococcus faecalis TX0109] gi|306503176|gb|EFM72430.1| deoxynucleoside kinase [Enterococcus faecalis TX0860] gi|306508602|gb|EFM77700.1| deoxynucleoside kinase [Enterococcus faecalis TX2134] gi|306510837|gb|EFM79854.1| deoxynucleoside kinase [Enterococcus faecalis TX0855] gi|306513903|gb|EFM82505.1| deoxynucleoside kinase [Enterococcus faecalis TX4248] gi|310628047|gb|EFQ11330.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 512] gi|310628958|gb|EFQ12241.1| deoxynucleoside kinase [Enterococcus faecalis TX0102] gi|310632338|gb|EFQ15621.1| deoxynucleoside kinase [Enterococcus faecalis TX0635] gi|311290422|gb|EFQ68978.1| deoxynucleoside kinase [Enterococcus faecalis DAPTO 516] gi|311292522|gb|EFQ71078.1| deoxynucleoside kinase [Enterococcus faecalis TX0470] gi|315025763|gb|EFT37695.1| deoxynucleoside kinase [Enterococcus faecalis TX2137] gi|315029086|gb|EFT41018.1| deoxynucleoside kinase [Enterococcus faecalis TX4000] gi|315031434|gb|EFT43366.1| deoxynucleoside kinase [Enterococcus faecalis TX0017] gi|315036118|gb|EFT48050.1| deoxynucleoside kinase [Enterococcus faecalis TX0027] gi|315145242|gb|EFT89258.1| deoxynucleoside kinase [Enterococcus faecalis TX2141] gi|315146945|gb|EFT90961.1| deoxynucleoside kinase [Enterococcus faecalis TX4244] gi|315151560|gb|EFT95576.1| deoxynucleoside kinase [Enterococcus faecalis TX0012] gi|315153966|gb|EFT97982.1| deoxynucleoside kinase [Enterococcus faecalis TX0031] gi|315156759|gb|EFU00776.1| deoxynucleoside kinase [Enterococcus faecalis TX0043] gi|315157716|gb|EFU01733.1| deoxynucleoside kinase [Enterococcus faecalis TX0312] gi|315161940|gb|EFU05957.1| deoxynucleoside kinase [Enterococcus faecalis TX0645] gi|315164567|gb|EFU08584.1| deoxynucleoside kinase [Enterococcus faecalis TX1302] gi|315166910|gb|EFU10927.1| deoxynucleoside kinase [Enterococcus faecalis TX1341] gi|315170695|gb|EFU14712.1| deoxynucleoside kinase [Enterococcus faecalis TX1342] gi|315172176|gb|EFU16193.1| deoxynucleoside kinase [Enterococcus faecalis TX1346] gi|315575367|gb|EFU87558.1| deoxynucleoside kinase [Enterococcus faecalis TX0309B] gi|315577972|gb|EFU90163.1| deoxynucleoside kinase [Enterococcus faecalis TX0630] gi|315581397|gb|EFU93588.1| deoxynucleoside kinase [Enterococcus faecalis TX0309A] gi|323479935|gb|ADX79374.1| deoxyguanosine kinase [Enterococcus faecalis 62] gi|327534328|gb|AEA93162.1| deoxynucleoside kinase [Enterococcus faecalis OG1RF] gi|329573531|gb|EGG55136.1| deoxyguanosine kinase [Enterococcus faecalis TX1467] Length = 214 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 41/229 (17%), Positives = 75/229 (32%), Gaps = 36/229 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ +L+ L Y+ E AE E Sbjct: 4 IVLAGTIGAGKSSLTALIANRLGSEAFYESVDDNEVLPLFYAE---------------PE 48 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS---------QH 114 A + L+ + I+ AL +L DR + DS + Sbjct: 49 KYAFLLQIYFLNKRFDSIKQALTHENNVL-DRSIYEDSLLFHLNADLGRANETEVKVYDD 107 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + LQE+ + + PD + + + L+R++ R E D ++ Sbjct: 108 LLQNMLQELPYAAHKKRPDLLVHIRISFPKMLERIKKRGRPYEQIETDP---TLYDYYQM 164 Query: 173 RRQIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 + + + + I +D + V V L++K++ L Sbjct: 165 LNERYDQWYEDYDESPKIQIDGDK-YDFVEDPEACQYVLALIEKKIEEL 212 >gi|9757873|dbj|BAB08460.1| adenylylsulfate kinase-like protein [Arabidopsis thaliana] Length = 290 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 40/151 (26%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK++ L R L + +L Sbjct: 102 QKGCVIWITGLSGSGKSSLACALSRALHNRGK-----------------LSYILDGDNVR 144 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G ++ A R +++ V + G I + L S Y Sbjct: 145 HGLNSDLSFEADDRAENIRRVGEVAKLFADSGIICIA--SLISPY--------------- 187 Query: 119 SLQEISVQEVMP--DCT-IILDLPVDIGLKR 146 ++ + + ++P D + +D+P+ + R Sbjct: 188 RIERAACRALLPQGDFIEVFMDVPLHVCEAR 218 >gi|163938882|ref|YP_001643766.1| phosphoribulokinase/uridine kinase [Bacillus weihenstephanensis KBAB4] gi|163861079|gb|ABY42138.1| phosphoribulokinase/uridine kinase [Bacillus weihenstephanensis KBAB4] Length = 218 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 17/191 (8%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I GI G AGKTT + L L + T + ++ + + Sbjct: 19 IVI-GISGHGAAGKTTFANKLINQLNQNKVSYINTDPYIVSSNVRKYTNIHYTYQNENHY 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A +A L +E ++ + G D + ++ Y S + ++ + Sbjct: 78 DKMTACHPSAHHLSALERDVQ-MVRAG----LDFYTMDTH-YIKSELISSKNKVTIVEGM 131 Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 SV + P D I + L R +R + A ++Y + HE+RR + Sbjct: 132 SVAFINPNLFDLKIYFYTDGETELMRRSSRDIIERGADINYLRKS----HEERRIQYEVF 187 Query: 181 ARNQPDRCHIV 191 R I+ Sbjct: 188 MHQYSQRFDII 198 >gi|325848922|ref|ZP_08170432.1| polyamine ABC transporter, ATP-binding protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480566|gb|EGC83628.1| polyamine ABC transporter, ATP-binding protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 368 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 21/35 (60%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F + G G GKTT ++L+ FL+ + ++++ Sbjct: 32 KGKFYTLLGPSGCGKTTILNLIAGFLEANSGEIYI 66 >gi|323492926|ref|ZP_08098066.1| signal recognition particle-docking protein FtsY [Vibrio brasiliensis LMG 20546] gi|323312819|gb|EGA65943.1| signal recognition particle-docking protein FtsY [Vibrio brasiliensis LMG 20546] Length = 404 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 207 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 262 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A +G +++ D Sbjct: 263 TGADSASVIYDAIESAKAKGVDVVIAD 289 >gi|307252933|ref|ZP_07534821.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306859571|gb|EFM91596.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 241 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 55/234 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + T + R + E G +A Sbjct: 30 IILLGAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 76 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +A++ V + + AL++ +I D + + G + D+L++ Sbjct: 77 KALM---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---S 126 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166 V D + D+ ++ ++R+ R + D R+D Sbjct: 127 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDD 186 Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + H++ + + A R +D + V+ + I+ Sbjct: 187 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 240 >gi|227552855|ref|ZP_03982904.1| conserved hypothetical protein [Enterococcus faecalis HH22] gi|256965527|ref|ZP_05569698.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257418906|ref|ZP_05595900.1| predicted protein [Enterococcus faecalis T11] gi|227177986|gb|EEI58958.1| conserved hypothetical protein [Enterococcus faecalis HH22] gi|256956023|gb|EEU72655.1| conserved hypothetical protein [Enterococcus faecalis HIP11704] gi|257160734|gb|EEU90694.1| predicted protein [Enterococcus faecalis T11] gi|315573666|gb|EFU85857.1| conserved hypothetical protein [Enterococcus faecalis TX0309B] gi|315582719|gb|EFU94910.1| conserved hypothetical protein [Enterococcus faecalis TX0309A] Length = 177 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT + L + L+ + + + R +L DE G Sbjct: 17 KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 66 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140 >gi|209882658|ref|XP_002142765.1| ABC-2 type transporter family protein [Cryptosporidium muris RN66] gi|209558371|gb|EEA08416.1| ABC-2 type transporter family protein [Cryptosporidium muris RN66] Length = 790 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 56/160 (35%), Gaps = 21/160 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCG 58 G FI GI G+GK+T ++ L L+ N+ V + + R VL Sbjct: 144 TPGQFIGIMGISGSGKSTLLNALSGRLKASNFIVTGSILVNGYSDIDLSYLTRLVLQKDF 203 Query: 59 VDEFGAEAEAIVFAAA-RLDH-----VENVIRPALMEGKIL-LCDRFLDSSYAYQGERDS 111 + + E + AA RL H I L IL L D + S+ Sbjct: 204 MLPYLTVRETMDIAAGLRLPHHSKKERNEKIEEIL---DILGLLD--IQSTLVGGISSKG 258 Query: 112 SQHLFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQN 149 + L I+++ + P + LD GL + Sbjct: 259 LSGGEIKRLS-IAIELLQGPP--VLFLD-EPTTGLDAARA 294 >gi|195477878|ref|XP_002100332.1| GE16225 [Drosophila yakuba] gi|194187856|gb|EDX01440.1| GE16225 [Drosophila yakuba] Length = 299 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 19/46 (41%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52 + G+ +GK+T L+ + VH+ E P A ++ Sbjct: 4 VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN 49 >gi|194912820|ref|XP_001982574.1| GG12894 [Drosophila erecta] gi|190648250|gb|EDV45543.1| GG12894 [Drosophila erecta] Length = 299 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 19/46 (41%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52 + G+ +GK+T L+ + VH+ E P A ++ Sbjct: 4 VVITGLPASGKSTRARQLRDHFVERGRKVHLISENEAVPKAGFGKN 49 >gi|152993786|ref|YP_001359507.1| guanylate kinase [Sulfurovum sp. NBC37-1] gi|151425647|dbj|BAF73150.1| guanylate kinase [Sulfurovum sp. NBC37-1] Length = 203 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 4/100 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G + G GAGK+T I+ + + + TR+P + Sbjct: 1 MHKGAILVLSGPSGAGKSTIINAASDEIGEYYFSISTTTRDPRMGEQDGVDYFFVSKEEF 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCD 96 +E + +A ++ ++P AL +GK+++ D Sbjct: 61 EEDIKAGNFLEYAQVHGNYYGTSLKPVNKALEQGKLVIFD 100 >gi|118578512|ref|YP_899762.1| sulfate adenylyltransferase, large subunit [Pelobacter propionicus DSM 2379] gi|118501222|gb|ABK97704.1| adenylylsulfate kinase [Pelobacter propionicus DSM 2379] Length = 638 Score = 39.2 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L+R L +LL G + Sbjct: 474 GLSGSGKSTIANCLERRLHAMGRHT-----------------ILLDGDNVRHGLNRDLGF 516 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 A R++++ V + G I++ Sbjct: 517 TEADRIENIRRIGEVAKLMTDAGLIVIS 544 >gi|297526472|ref|YP_003668496.1| adenylylsulfate kinase [Staphylothermus hellenicus DSM 12710] gi|297255388|gb|ADI31597.1| adenylylsulfate kinase [Staphylothermus hellenicus DSM 12710] Length = 181 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 16/96 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-LSCGV 59 ++ G + F G+ G+GKTT + L+ K Y V V + AR + L G Sbjct: 4 LDKGFVVWFTGLPGSGKTTLAYKVAEILRDKGYRVEVI-------DGDWARKTISLGAGY 56 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 L + V R G I+LC Sbjct: 57 TREERRI--------HLHRIAWVARLLARNGVIVLC 84 >gi|260889029|ref|ZP_05900292.1| cytidylate kinase [Leptotrichia hofstadii F0254] gi|260861089|gb|EEX75589.1| cytidylate kinase [Leptotrichia hofstadii F0254] Length = 220 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 46/233 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-----HVTREPGGTPAAEAARHVLLSCGV 59 + I+ +G G+GK+T L+ L+ D VT + ++ Sbjct: 1 MIIAIDGPAGSGKSTIAKLIAEDLELVYLDTGAMYRLVTLKALNDGILGNLDKIIKMLDN 60 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD----RFLDSSYA-YQGERDSSQH 114 + F +D E + +P + E + D R + Q + S++ Sbjct: 61 LNIDIKENG--FYLDDIDVSEEIRKPVVSEN---VSDIAAIREVRKKMVDLQRKFSESKN 115 Query: 115 LFLDSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + LD ++I V P D I L V +R RY + + + Sbjct: 116 VILDG-RDIGT-VVFPNADVKIFL---VADAKERANRRYKELVAKGEN----------VR 160 Query: 173 RRQIFLDIARNQ-------------PDRCHIVD-SAHSFQSVATNILNIVWEL 211 +I+ +I + D VD ++ + + V ILNI+ ++ Sbjct: 161 IEEIYENILKRDEIDSTRKESPLKKADNAIEVDTTSKNIEEVKNEILNIIRKI 213 >gi|224049079|ref|XP_002194377.1| PREDICTED: deoxycytidine kinase [Taeniopygia guttata] Length = 257 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 66/213 (30%), Gaps = 52/213 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--------------------GGTPA 46 ++ EG AGK+T +++LK+ + V EP Sbjct: 17 VAVEGNIAAGKSTFVNILKQ----AGEEWEVVPEPVARWCNVQQSSGDDCEELSTSQRSG 72 Query: 47 AEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL------CDRFLD 100 R + F + A + + R + + ++ DR++ Sbjct: 73 GNVLRMMYEKPERWAFTFQTYACL-SRIRAQLGALERKRGDAQNPVVFFERSVYSDRYIF 131 Query: 101 SSYAYQGERDSSQHLFL-----DSLQ-----EISVQEVMPDCTIILDLPVDIGLKRVQNR 150 ++ Y+ + + + D + +++ + I L + L R+ R Sbjct: 132 AANLYESDCMNETEWTIYQDWHDWMNKQFGSRLALDGI-----IYLRATPEKCLNRIYLR 186 Query: 151 YSLRESA-CLDYFER-----KDVMIHEKRRQIF 177 E ++Y E+ + + H R F Sbjct: 187 GRDEEQEIPIEYLEKLHYKHESWLQHRTLRTNF 219 >gi|145300395|ref|YP_001143236.1| adenylylsulfate kinase [Aeromonas salmonicida subsp. salmonicida A449] gi|229484852|sp|A4SRG6|CYSC_AERS4 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|142853167|gb|ABO91488.1| adenylylsulfate kinase [Aeromonas salmonicida subsp. salmonicida A449] Length = 196 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 69/216 (31%), Gaps = 62/216 (28%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ GAGK+T L++ L + + LL G Sbjct: 27 IWFTGLSGAGKSTLAGALEQALAVEGKHTY-----------------LLDGDNVRHGLCG 69 Query: 67 EAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--Q 121 + AAR +++ V + + G I+L A+ + + L + L Sbjct: 70 DLGFDDAARQENIRRVGEVAKLMVDAGLIVLT--------AFISPFRAERELVRNLLGAD 121 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLDYFERKDVMIHEKRR 174 E + +D P+ + +R +R +D Sbjct: 122 EFVE--------VFVDAPLAVCEERDPKGLYKKARAGEIRNFTGID-------------- 159 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + A QP+ H++++ ++ +L + + Sbjct: 160 SAYE--APKQPE-IHLLNAGKPVAALVDELLTALRQ 192 >gi|70729070|ref|YP_258806.1| cytochrome c biogenesis protein CcmA [Pseudomonas fluorescens Pf-5] gi|122063273|sp|Q4KG27|CCMA_PSEF5 RecName: Full=Cytochrome c biogenesis ATP-binding export protein CcmA; AltName: Full=Heme exporter protein A gi|68343369|gb|AAY90975.1| heme exporter protein CcmA [Pseudomonas fluorescens Pf-5] Length = 211 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 4/85 (4%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEFGA 64 G G+GKT+ + LL +Q + V + +P AE AR++L + Sbjct: 36 ISGPNGSGKTSLLRLLAGLMQPTSGQVLLNGQPLHAQRAELARNLLWIGHAAGIKELLSP 95 Query: 65 EAEAIVFAAARLDHVENVIRPALME 89 E A I AL Sbjct: 96 EENLSWLCALHQPARREAIWQALAA 120 >gi|18309042|ref|NP_560976.1| deoxyguanosine kinase [Clostridium perfringens str. 13] gi|18143717|dbj|BAB79766.1| probable deoxyguanosine kinase [Clostridium perfringens str. 13] Length = 228 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 17 KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74 K+T +++L + EP + +L + + + F Sbjct: 37 KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 83 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127 R H++ L+E + DR + + + ++ L+ + Sbjct: 84 RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 138 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186 P + L++ VD +KR+Q R E ER+ EK + + N Sbjct: 139 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 191 Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223 ++ F++V + V L+ +++S L + K Sbjct: 192 PILRINVDELDFENVPED-REYVLNLIDEKLSELENNK 228 >gi|228901542|ref|ZP_04065724.1| hypothetical protein bthur0014_27320 [Bacillus thuringiensis IBL 4222] gi|228858106|gb|EEN02584.1| hypothetical protein bthur0014_27320 [Bacillus thuringiensis IBL 4222] Length = 282 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|169343408|ref|ZP_02864412.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens C str. JGS1495] gi|169298494|gb|EDS80580.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens C str. JGS1495] Length = 227 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 17 KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74 K+T +++L + EP + +L + + + F Sbjct: 36 KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 82 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127 R H++ L+E + DR + + + ++ L+ + Sbjct: 83 RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 137 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186 P + L++ VD +KR+Q R E ER+ EK + + N Sbjct: 138 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 190 Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223 ++ F++V + V L+ +++S L + K Sbjct: 191 PILRINVDELDFENVPED-REYVLNLIDEKLSQLENNK 227 >gi|50551793|ref|XP_503371.1| YALI0E00418p [Yarrowia lipolytica] gi|49649240|emb|CAG78950.1| YALI0E00418p [Yarrowia lipolytica] Length = 198 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 26/138 (18%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ +GK+T + L++FL + L FG + Sbjct: 29 FTGLSASGKSTIATALEQFLLQN-----------------KINSYRLDGDNVRFGLNKDL 71 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 A R +++ + A + F DS+ S S +E+ Sbjct: 72 GFSEADRNENIRRISEVAKL---------FTDSTCVTLTSFISPYKKDRQSARELHEASN 122 Query: 129 MPDCTIILDLPVDIGLKR 146 +P + +D+P+++ +R Sbjct: 123 LPFVEVYVDVPIEVAEQR 140 >gi|70987262|ref|XP_749109.1| uridylate kinase Ura6 [Aspergillus fumigatus Af293] gi|66846739|gb|EAL87071.1| uridylate kinase Ura6 [Aspergillus fumigatus Af293] gi|159123118|gb|EDP48238.1| uridylate kinase Ura6 [Aspergillus fumigatus A1163] Length = 235 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 65/213 (30%), Gaps = 36/213 (16%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T + L R L + RE G+ + R + + Sbjct: 40 GGPGSGKGTQSANLVRDYGFIHLSAGDLLRAEQVRE--GSQYGDLIRTYIKEGKIVPMEI 97 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A A + K RFL G Sbjct: 98 TVALLSNAMAEALAAGAGATAEGGKKKA----RFLID-----GFPRKLDQAV------FF 142 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 V P + T+ LD P ++ KR+ R E++ D + + KR ++F++ Sbjct: 143 EDTVCPSEMTLFLDCPEEVMEKRLLKRG---ETSGRDDDNAESI---RKRFRVFVETSMP 196 Query: 180 --IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A + + V + + V I + + Sbjct: 197 VVRAFEEQQKVLSVSATGTVDEVYARIREGLEK 229 >gi|99080117|ref|YP_612271.1| adenylate kinase [Ruegeria sp. TM1040] gi|99036397|gb|ABF63009.1| Adenylate kinase [Ruegeria sp. TM1040] Length = 193 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 38/216 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T S L + TR + R E G + Sbjct: 4 IILLGPPGAGKGTQASHLVK-----------TRNMTQLSTGDMLRAA--QSSGSEMGKKV 50 Query: 67 EAIVFA--AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AI+ V +IR L EG + + + G + D+L+++ Sbjct: 51 AAIMAEGKLVTDQIVIGLIRERLQEGS--------EGGFIFDGFPRTLAQA--DALEKLL 100 Query: 125 VQ-EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + + D I + + ++ +KR+ NR +A E + + R ++ + Sbjct: 101 TEMGLKLDAVIEMQVDDEVLVKRIVNRAEEARAAGK---EARADDNEDSVRIRLMEYYKK 157 Query: 184 ---------QPDRCHIVDSAHSFQSVATNILNIVWE 210 +D S V +I I+ + Sbjct: 158 TSPLIGYYWAKGNLQRLDGMASIDEVQKSIAWILGD 193 >gi|325915272|ref|ZP_08177592.1| Adenylate kinase [Xanthomonas vesicatoria ATCC 35937] gi|325538465|gb|EGD10141.1| Adenylate kinase [Xanthomonas vesicatoria ATCC 35937] Length = 187 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 44/219 (20%), Positives = 72/219 (32%), Gaps = 55/219 (25%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK T + LK T E + R + + A+ Sbjct: 4 VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51 Query: 68 AIVFAAARLDHVENVI----------RPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 AR D V + I +P + +G + D + R+ +Q L Sbjct: 52 ----VMARGDLVSDDILLGMLESRLGQPDVAKGF--ILDGY---------PRNVAQANAL 96 Query: 118 DSLQEISVQEV-MP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 DSL + ++ P D + LD+ ++ ++R+ R E D E KR Q Sbjct: 97 DSL----LGKIGQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQ 146 Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208 ++ D Q + VD S V I + Sbjct: 147 VYTDSTAPVIGFYEQRGKLARVDGVGSLDEVLERISKAL 185 >gi|319638771|ref|ZP_07993530.1| cell division protein FtsY [Neisseria mucosa C102] gi|317400012|gb|EFV80674.1| cell division protein FtsY [Neisseria mucosa C102] Length = 510 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 317 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 371 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 372 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 422 Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159 MPD ++LD +IG V + E+ L Sbjct: 423 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 456 >gi|291276604|ref|YP_003516376.1| putative ATP /GTP binding protein [Helicobacter mustelae 12198] gi|290963798|emb|CBG39634.1| putative ATP /GTP binding protein [Helicobacter mustelae 12198] Length = 335 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 14/89 (15%) Query: 6 FISFEGIEGAGKTTHISLLKR---FLQRKNYDV------HVTREPGGTPAAEAARHVLLS 56 FI+ G G GK+ + LK L+ + T+E G P+ + +++ Sbjct: 135 FITLSGPTGCGKSEILEALKEQCIHLESLAHHYGSSFGDIATKELGPQPSQKMFENLIAH 194 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRP 85 + +F A + N+I P Sbjct: 195 EIHTKPQP-----LFIEAESKRLGNLIVP 218 >gi|259415828|ref|ZP_05739748.1| adenylate kinase (ATP-AMP transphosphorylase) [Silicibacter sp. TrichCH4B] gi|259347267|gb|EEW59044.1| adenylate kinase (ATP-AMP transphosphorylase) [Silicibacter sp. TrichCH4B] Length = 193 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 70/216 (32%), Gaps = 38/216 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T S L +R + R E G + Sbjct: 4 IILLGPPGAGKGTQASHLVE-----------SRNMTQLSTGDMLRAA--QSSGSEMGKKV 50 Query: 67 EAIVFA--AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-I 123 AI+ V +IR L EG + + + G + D+L++ + Sbjct: 51 AAIMAEGKLVTDQIVIGLIRERLQEGS--------EGGFIFDGFPRTLAQA--DALEKLL 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + ++ D I + + ++ +KR+ NR +A E + E R ++ + Sbjct: 101 AEMDLKLDAVIEMQVDDEVLVKRIVNRAEEARAAGK---EARADDNEESVRIRLMEYYKK 157 Query: 184 ---------QPDRCHIVDSAHSFQSVATNILNIVWE 210 +D S V +I I+ E Sbjct: 158 TSPLIGYYWAKGNLQRLDGMASIDEVQKSIAWILGE 193 >gi|222834682|gb|EEE73145.1| predicted protein [Populus trichocarpa] Length = 250 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 16/126 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE-AARHVLLSCGVDEFGAEAEAI 69 GI+G+GK+T + L + L R+ Y V P A R + V+ +G E E+ Sbjct: 106 GIQGSGKSTITAKLAKLLTRQGYKTGVVGADTYRPGALVQLRTMCERSNVEVYGEEGES- 164 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 V +R ++L D R + LD ++ I + Sbjct: 165 ----DAPAVVRRGLRHFGDSCDVILVD---------TAGRHKEEGELLDEMKRIG-KAAE 210 Query: 130 PDCTII 135 PD ++ Sbjct: 211 PDLALL 216 >gi|149921143|ref|ZP_01909601.1| hypothetical protein PPSIR1_24934 [Plesiocystis pacifica SIR-1] gi|149818030|gb|EDM77489.1| hypothetical protein PPSIR1_24934 [Plesiocystis pacifica SIR-1] Length = 186 Score = 39.2 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 58/164 (35%), Gaps = 28/164 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI G G GKTT L L+ ++Y + E AR LS D A Sbjct: 8 FI---GTHGVGKTTLCYGLAARLKAQDYVL--------DIVHEVARRCPLSINEDTNVAA 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY----QGERDSSQHLFLDSLQ 121 I+ + + A ++LCDR + +Y Y G D+ L L+ Sbjct: 57 QSWILHTQIADELL------AAARHPVVLCDRSVLDNYVYLLVAGGRDDALDTLVASWLR 110 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 D I + + ++ +++ + + A D R+ Sbjct: 111 TY-------DLLIYVPVVAELKPDGMRSTDAAFQQAIDDRLLRE 147 >gi|325287015|ref|YP_004262805.1| Adenylate kinase [Cellulophaga lytica DSM 7489] gi|324322469|gb|ADY29934.1| Adenylate kinase [Cellulophaga lytica DSM 7489] Length = 368 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 73/210 (34%), Gaps = 42/210 (20%) Query: 14 GAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GAGK T + LK K+ DV GT A+ + G ++ Sbjct: 189 GAGKGTQANFLKEQYNLKHISTGDVFRYNIKNGTELGTLAKSFI-DKGELVPDEVTINML 247 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 E V + G + D F ++ +Q LD +S +++ Sbjct: 248 --------KEEVEKNPDASGF--IFDGFPRTT---------AQAEALD--NFLSTKDMKI 286 Query: 131 DCTIILDLPVDIGLKRVQNRY-------SLRESACLDYFERKDVMIHEKRR--QIFLDIA 181 D TI LD ++ ++R+ R ES + FE ++K Q + Sbjct: 287 DATIALDANDEVLIQRLLERGKVSGRSDDQDESKIRNRFE----EYNQKTAPLQAYY--- 339 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 N+ + H V+ + + T + ++ L Sbjct: 340 -NKQGKFHTVNGIGEIKEITTRLSKVIDTL 368 >gi|310658249|ref|YP_003935970.1| membrane ATPase/protein kinase [Clostridium sticklandii DSM 519] gi|308825027|emb|CBH21065.1| membrane ATPase/protein kinase [Clostridium sticklandii] Length = 310 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 6/60 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPG-----GTPAAEAARHVLLSCGVD 60 I G GAGK+T L + L+ K V + +P G + R V LS D Sbjct: 46 IGITGPPGAGKSTLTDKLIKKLREKGKKVGVIAIDPTSPFTKGAILGDRIRMVDLSVDKD 105 >gi|309794098|ref|ZP_07688523.1| conserved domain protein [Escherichia coli MS 145-7] gi|308122505|gb|EFO59767.1| conserved domain protein [Escherichia coli MS 145-7] Length = 131 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 31/141 (21%) Query: 88 MEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSLQEISVQEV------MPDCTIIL 136 G I+L DR+ AY G + F+ L + PD I L Sbjct: 6 RRGLIVLTDRYPQDQIPGAYDGTVFPPNIEGGRFVSWLASQERKAFHWMASHKPDLVIKL 65 Query: 137 DLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSA 194 ++ +++ R R SL + + + +D+ Sbjct: 66 NVDLEVACARKPDHKRESLARKIAI----TPQLTF------GGAQLVD--------IDAN 107 Query: 195 HSFQSVATNILNIVWELVQKR 215 + V + + + + R Sbjct: 108 RPLEQVLVDAEKAITDFMTAR 128 >gi|295688956|ref|YP_003592649.1| sulfate adenylyltransferase large subunit [Caulobacter segnis ATCC 21756] gi|295430859|gb|ADG10031.1| sulfate adenylyltransferase, large subunit [Caulobacter segnis ATCC 21756] Length = 635 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 34/139 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T +L+++ L + LL G + Sbjct: 467 GLSGAGKSTIANLVEKRLHALGRHTY-----------------LLDGDNVRHGLNKDLGF 509 Query: 71 FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R++ V V + + G I+L A+ + + L D LQ E Sbjct: 510 TEEDRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRAERQLARDILQ---PGE 558 Query: 128 VMPDCTIILDLPVDIGLKR 146 + +D P+ + R Sbjct: 559 F---IEVFIDTPLAVAEAR 574 >gi|261401832|ref|ZP_05987957.1| signal recognition particle-docking protein FtsY [Neisseria lactamica ATCC 23970] gi|269208010|gb|EEZ74465.1| signal recognition particle-docking protein FtsY [Neisseria lactamica ATCC 23970] Length = 409 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 216 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 270 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 271 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 321 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 322 AMPDAPHEIIVVLD 335 >gi|225718626|gb|ACO15159.1| Guanylate kinase [Caligus clemensi] Length = 199 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 70/182 (38%), Gaps = 35/182 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M+S + G G+GK+T I L K F + V H TR P +A H + Sbjct: 1 MSSKTLVVC-GPSGSGKSTLIKRLFKEFPSAFGFSVSHTTRSPRPGEVPGSAYHFVERAE 59 Query: 59 VDEFGAEAEAI--------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD 110 +++ + + I ++ + VE+V+ K+ + D +D+ QG R Sbjct: 60 MEKMISNGDFIENAEFSGNLYGTS-FQAVESVV---ADSSKVCILD--IDA----QGVRQ 109 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFE--RKDV 167 + P + + +P +++ +R++ R + E + ++++ Sbjct: 110 VKNKEE----------PLQP-LYVFIKVPSLEVLEERLRGRKTESEESLSKRLSMAKEEL 158 Query: 168 MI 169 Sbjct: 159 EY 160 >gi|218710918|ref|YP_002418539.1| cell division protein FtxY [Vibrio splendidus LGP32] gi|218323937|emb|CAV20299.1| Cell division protein ftsY [Vibrio splendidus LGP32] Length = 422 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 225 GVNGVGKTTTIGKLAKQFQSEGKKVMLAA--GDTFRAAAVEQLQVWGQRNDVPVIAQH-- 280 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 281 TGADSASVIYDAIEAAKARGVDVVIAD 307 >gi|323450023|gb|EGB05907.1| hypothetical protein AURANDRAFT_66102 [Aureococcus anophagefferens] Length = 227 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 48/148 (32%), Gaps = 23/148 (15%) Query: 15 AGKTTHISLLKRFLQRKNYD-VHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV--F 71 GK+T ++ L+ + V EP + + + A+ + Sbjct: 4 VGKSTLLAKLRDA--YAGVEGVVFVDEPVAAWEQAGLLSAMYDGRLHAAVFQMMALSTRY 61 Query: 72 AAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 AA R AL G ++++ +R L S +++ ++ Sbjct: 62 AALRR---------ALTSGARLVVSERSLWSDRCVFAATHLKGCD--KDAYDLAHDSMLA 110 Query: 131 DC------TIILDLPVDIGLKRVQNRYS 152 TI+LD PV L RV R Sbjct: 111 SLPATARATILLDAPVATLLARVAARGR 138 >gi|319790268|ref|YP_004151901.1| signal recognition particle protein [Thermovibrio ammonificans HB-1] gi|317114770|gb|ADU97260.1| signal recognition particle protein [Thermovibrio ammonificans HB-1] Length = 448 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 19/29 (65%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 G++G+GKTT + L +L+++ V +T Sbjct: 106 GLQGSGKTTTAAKLANYLKKQGKKVLLTS 134 >gi|307321480|ref|ZP_07600876.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306892865|gb|EFN23655.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] Length = 169 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 63/206 (30%), Gaps = 51/206 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVH----VTREPGGTPAAEAARHVLLSCGVDEFGA 64 EG G GKT+ + L+R+ Y V V G +A L+ G Sbjct: 8 IEGGSGTGKTS----VATELERRGYHVIHGDRVLAYVGDLETGQA-----LAGPPKGAGR 58 Query: 65 EAEAIVFAAARLDHVENVIRP--ALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A R H + A+ S + L Sbjct: 59 VAW-------RYAHWIWPVDKVRAIAADTT-----HPASFFC------GGSRNSRKFLHL 100 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 D +LD+ V+ +R+ R + ER V+ + R+ +L Sbjct: 101 F-------DKVFVLDIDVETLNRRLDERPNDFGFKPA---ERALVLRCHRTRE-YL---- 145 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIV 208 P +D+A++ V +IL + Sbjct: 146 --PAGI-TIDTANTVARVVDDILAHL 168 >gi|259502493|ref|ZP_05745395.1| deoxynucleoside kinase [Lactobacillus antri DSM 16041] gi|259169519|gb|EEW54014.1| deoxynucleoside kinase [Lactobacillus antri DSM 16041] Length = 213 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 53/163 (32%), Gaps = 20/163 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLLSCGV 59 I+ G GAGKT+ LL L + + + L+ + Sbjct: 2 IALAGTIGAGKTSLTQLLADHLNSTAFYESVDDNKILPLFYKNPKKYGFLLQIYFLNKRI 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 DE + + R E+ + L D A Q E D L + Sbjct: 62 DEIKDSYDNDLNVLDRSI-FEDALLFKLNA----------DMGRATQTESDIYSSLLANM 110 Query: 120 LQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++E+ Q PD I + + + LKR++ R E D Sbjct: 111 MEELPEQPHQKAPDLLITIQVSFETMLKRIEKRGRAYEQIAND 153 >gi|242012113|ref|XP_002426785.1| dynein beta chain, ciliary, putative [Pediculus humanus corporis] gi|212510967|gb|EEB14047.1| dynein beta chain, ciliary, putative [Pediculus humanus corporis] Length = 4206 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTP 45 M + ++ G G GKTT + LLK LQ+ Y V T P P Sbjct: 1924 MQQRMGVALVGPSGTGKTTILKLLKSALQKLGYTVKRYTVNPKSMP 1969 >gi|194246475|ref|YP_002004114.1| Signal recognition particle-docking protein [Candidatus Phytoplasma mali] gi|193806832|emb|CAP18261.1| Signal recognition particle-docking protein [Candidatus Phytoplasma mali] Length = 324 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I + + + K V + G T + A + +G ++ V Sbjct: 127 GVNGVGKTTTIGKIAQQFKNKQKKVLLIA--GDTFRSGAIEQL------KIWGQRTQSTV 178 Query: 71 FAAARLDHVENVIRPAL-----MEGKILLCD 96 F + NVI L ++LCD Sbjct: 179 FFKEQAKSPSNVIFEGLQLAKKENYDVVLCD 209 >gi|189011600|ref|NP_001121044.1| hypothetical protein LOC688393 [Rattus norvegicus] gi|149050734|gb|EDM02907.1| rCG61644 [Rattus norvegicus] gi|171847403|gb|AAI61949.1| LOC688393 protein [Rattus norvegicus] Length = 373 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L K VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A + +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNTFRYVLID 122 >gi|58221335|gb|AAW68310.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|193735094|gb|ACF20056.1| regulatory protein [Neisseria gonorrhoeae] gi|193735098|gb|ACF20058.1| regulatory protein [Neisseria gonorrhoeae] gi|193735102|gb|ACF20060.1| regulatory protein [Neisseria gonorrhoeae] Length = 140 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 108 -AGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|19526970|ref|NP_598517.1| GPN-loop GTPase 1 [Mus musculus] gi|34925345|sp|Q8VCE2|GPN1_MOUSE RecName: Full=GPN-loop GTPase 1; AltName: Full=MBD2-interacting protein; Short=MBDin; AltName: Full=XPA-binding protein 1 gi|18044064|gb|AAH20174.1| GPN-loop GTPase 1 [Mus musculus] gi|26346551|dbj|BAC36923.1| unnamed protein product [Mus musculus] gi|66792514|gb|AAH96466.1| GPN-loop GTPase 1 [Mus musculus] gi|74144765|dbj|BAE27360.1| unnamed protein product [Mus musculus] gi|74219305|dbj|BAE26784.1| unnamed protein product [Mus musculus] gi|148705422|gb|EDL37369.1| XPA binding protein 1 [Mus musculus] Length = 372 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L L K VH P + + V+ G+ Sbjct: 26 GMAGSGKTTFVQRLTGHLHNKGCPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 85 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I A + +L D Sbjct: 86 GPNGGIVTSLNLFATRFDQVMKFIEKAQNTFRYVLID 122 >gi|86148197|ref|ZP_01066495.1| cell division protein FtsY [Vibrio sp. MED222] gi|85834044|gb|EAQ52204.1| cell division protein FtsY [Vibrio sp. MED222] Length = 422 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 225 GVNGVGKTTTIGKLAKQFQSEGKKVMLAA--GDTFRAAAVEQLQVWGQRNDVPVIAQH-- 280 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 281 TGADSASVIYDAIEAAKARGVDVVIAD 307 >gi|302835766|ref|XP_002949444.1| hypothetical protein VOLCADRAFT_74239 [Volvox carteri f. nagariensis] gi|300265271|gb|EFJ49463.1| hypothetical protein VOLCADRAFT_74239 [Volvox carteri f. nagariensis] Length = 642 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 44/130 (33%), Gaps = 15/130 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GK+T+++ + +L V + T A A + C Sbjct: 414 IVFCGVNGVGKSTNLAKIAYWLGGHGIKVMIAA--CDTFRAGAVEQLKTHCARLRVPLYE 471 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL-QEISV 125 + IR A +G+ ++ +D+ R + +L I+V Sbjct: 472 RG--YEKDPAKVAYEAIRQAERDGQHVVL---VDT-----AGRMQDNQPLMRALSNLIAV 521 Query: 126 QEVMPDCTII 135 P+ + Sbjct: 522 NN--PNLVLF 529 >gi|226304858|ref|YP_002764816.1| hypothetical protein RER_13690 [Rhodococcus erythropolis PR4] gi|226183973|dbj|BAH32077.1| hypothetical protein RER_13690 [Rhodococcus erythropolis PR4] Length = 203 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 19/151 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ +G++G+GKTT L L + V + P R Sbjct: 22 LVAIDGVDGSGKTTFAKSLTAQLNARTAIVIHVDDFLNPPEIRHRR--------GRQSP- 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRF----LDSSYAYQGERDSSQHLFLDSLQ 121 E + D +E + L G R+ Y + + L L Sbjct: 73 -EGFWLDSYDYDALERHVLDPLGPGG---SRRYRQRRDSDPYLHAADGAIVLVEGL-FLH 127 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 + E D ++ LD P + +R+ R Sbjct: 128 RDELAERW-DYSVFLDAPFEETARRMNLRDG 157 >gi|156332002|ref|XP_001619228.1| hypothetical protein NEMVEDRAFT_v1g152021 [Nematostella vectensis] gi|156202011|gb|EDO27128.1| predicted protein [Nematostella vectensis] Length = 204 Score = 39.2 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 59/199 (29%), Gaps = 38/199 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFL--QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I+ G GAGKTT LL + + DV P + H ++ + Sbjct: 3 IAVAGNIGAGKTTLTKLLAKHFKWEAHYEDVV------DNPYLDDFYH-----QMERWSF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114 + + + GK + DR + DS + ERD + Sbjct: 52 NLQIYFLNSRFRQ-----VLQIRQSGKTTIQDRTIYEDSHIFAPNLYTMRLMSERDFKNY 106 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + L L E V PD I L + N + DY + + Sbjct: 107 ISLFELMEGLVGS--PDLLIYL-------RSSIPNLVNQIHKRGRDYENTISIDYLSRLN 157 Query: 175 QIFLDIARN-QPDRCHIVD 192 + + + I+D Sbjct: 158 ERYEAWIETYDKGKLVIID 176 >gi|330813910|ref|YP_004358149.1| guanylate kinase [Candidatus Pelagibacter sp. IMCC9063] gi|327487005|gb|AEA81410.1| guanylate kinase [Candidatus Pelagibacter sp. IMCC9063] Length = 209 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 27/161 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G+ I GAGKTT L V TR+P + H + S Sbjct: 15 KRGVLIVISSPSGAGKTTIAKKLVSKKLNIELSVSLTTRKPRSNEINKVDYHFV-SKKFF 73 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + + + A D+ + I L +GK +L D +QG R + Sbjct: 74 QTKIKQKHFLEHAKVFDNFYGTSQKEITNKLSKGKNILLD------IDWQGARQVRKKKA 127 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 D++ I + LP LK ++ R RES+ Sbjct: 128 TDTVS------------IFI-LPP--SLKVLKQRLMKRESS 153 >gi|325207096|gb|ADZ02548.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis NZ-05/33] Length = 421 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|312233708|gb|ADQ53974.1| putative conjugative transfer protein [Vibrio harveyi] Length = 699 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 5/126 (3%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-GAE 65 +G GAGK+ + L R+++++ V + + + ++ +LL+ + + Sbjct: 203 IDGTTGAGKSVMLRKLLRWIRKRGDKAIVYDKGCTFTSKFFDPSQDILLNPFDERCANWD 262 Query: 66 AEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A +++ N + P EG + R + SS AY+ +D+ L I Sbjct: 263 VWCDAKEAPDFENIANALIPQHGEGDPFWVDSARTIFSSAAYRMSQDNKPCSTARLLSLI 322 Query: 124 SVQEVM 129 E+ Sbjct: 323 LTSELE 328 >gi|297831946|ref|XP_002883855.1| hypothetical protein ARALYDRAFT_480365 [Arabidopsis lyrata subsp. lyrata] gi|297329695|gb|EFH60114.1| hypothetical protein ARALYDRAFT_480365 [Arabidopsis lyrata subsp. lyrata] Length = 277 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 52/152 (34%), Gaps = 42/152 (27%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L + L +K + +L Sbjct: 99 QKGCVIWVTGLSGSGKSTLACALNQMLYQKGKLCY-----------------ILDGDNVR 141 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYA-YQGERDSSQHLFL 117 G + A R +++ V + G I + S + Y+ +RD Sbjct: 142 HGLNRDLSFKAEDRAENIRRVGEVAKLFADAGIICIA-----SLISPYRTDRD------- 189 Query: 118 DSLQEISVQEVMP--DCT-IILDLPVDIGLKR 146 + + ++P D + +D+P+++ R Sbjct: 190 ------ACRNLLPEGDFVEVFMDVPLEVCEAR 215 >gi|296437841|gb|ADH20002.1| cytidylate kinase [Chlamydia trachomatis G/11074] Length = 216 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|294661294|ref|YP_003573170.1| hypothetical protein Aasi_1773 [Candidatus Amoebophilus asiaticus 5a2] gi|227336445|gb|ACP21042.1| hypothetical protein Aasi_1773 [Candidatus Amoebophilus asiaticus 5a2] Length = 442 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTT + L +L+R+N V + PAA L + E + V Sbjct: 106 GLQGSGKTTFSAKLANYLKRQNKSVLLVACDIYRPAAAEQ----LHVLGQQIDVEVFSKV 161 Query: 71 FAAARLDHVENVIRPALMEGK-ILLCD 96 + + I A K +++ D Sbjct: 162 DHKDAIQIAQEGIEYAKNTHKQVVIID 188 >gi|226306495|ref|YP_002766455.1| guanylate kinase [Rhodococcus erythropolis PR4] gi|226185612|dbj|BAH33716.1| guanylate kinase [Rhodococcus erythropolis PR4] Length = 199 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 44/219 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G + G GK++ + L+ L + V TR+P Sbjct: 15 RRGRLVVLAGPSAVGKSSVVRELRTRLPELVFSVSATTRDPRPGEVDGKDYRFTSREEFQ 74 Query: 61 EFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E + +A R I AL GK +L + Sbjct: 75 RMIDSGELLEWAEIHGGLQRSGTPAAPIEEALEAGKPVL--------------------V 114 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +D +V++ MP+ ++ P D+ ++R+ R + E E + Sbjct: 115 EVDLAGARAVRKAMPEALLVFMAPPSWDVLVQRLTGRGTETEDVVARRLETA------RV 168 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++A IV+ + V+ +V LV Sbjct: 169 -----ELAAQDEFDTVIVN-----EDVSRACDELVSLLV 197 >gi|261379167|ref|ZP_05983740.1| signal recognition particle-docking protein FtsY [Neisseria cinerea ATCC 14685] gi|269144353|gb|EEZ70771.1| signal recognition particle-docking protein FtsY [Neisseria cinerea ATCC 14685] Length = 347 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 154 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 208 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 209 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 259 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 260 AMPDAPHEIIVVLD 273 >gi|225076774|ref|ZP_03719973.1| hypothetical protein NEIFLAOT_01825 [Neisseria flavescens NRL30031/H210] gi|224951872|gb|EEG33081.1| hypothetical protein NEIFLAOT_01825 [Neisseria flavescens NRL30031/H210] Length = 419 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 226 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 280 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 281 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 331 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 332 AMPDAPHEIIVVLD 345 >gi|126662408|ref|ZP_01733407.1| Deoxynucleoside kinase subfamily, putative [Flavobacteria bacterium BAL38] gi|126625787|gb|EAZ96476.1| Deoxynucleoside kinase subfamily, putative [Flavobacteria bacterium BAL38] Length = 204 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 60/197 (30%), Gaps = 34/197 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT LL + + EP + + L + E Sbjct: 3 IAVAGNIGAGKTTLTKLLAKHFK---------WEP---HFEDVVDNPYLDDFYHQM--ER 48 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQHLF 116 + L+ + GK ++ DR + D+ + RD + + Sbjct: 49 WSFNLQIYFLNSRFRQVLQIRESGKNIIQDRTIYEDAHIFAPNLHAMGLMSNRDYTNYTS 108 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 L L E V PD I L + N S DY + + + Sbjct: 109 LFELMESLVGA--PDLLIYL-------RSSIPNLVSQIHKRGRDYENSISIEYLSRLNER 159 Query: 177 FLDIARN-QPDRCHIVD 192 + + + I+D Sbjct: 160 YEAWIQTYDKGKLVIID 176 >gi|94988039|ref|YP_596140.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS9429] gi|94541547|gb|ABF31596.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS9429] Length = 226 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 32/229 (13%), Positives = 73/229 (31%), Gaps = 44/229 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52 + I G +GK+T + ++ ++ Y V + G EA R Sbjct: 27 KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 82 Query: 53 --VLLSCGVDEFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 +L + G + +E + A +I+ L + D + Sbjct: 83 NQILKADGELDRTKLSEMLFSNPNNMATSSAIQNQIIKEELAAKR----D--------HL 130 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + + + + L E+ Q+ D ++ + L+R+ R L + + Sbjct: 131 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 188 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L I +P ++D+ +++ + + + L R Sbjct: 189 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 226 >gi|21244053|ref|NP_643635.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Xanthomonas axonopodis pv. citri str. 306] gi|21109675|gb|AAM38171.1| ATP sulfurylase [Xanthomonas axonopodis pv. citri str. 306] Length = 658 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+ + L Y +L G + Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R G I+L S + D + I Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFIE- 589 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + +D+P+ + R Sbjct: 590 --------VFVDVPLAVAEAR 602 >gi|15605179|ref|NP_219965.1| cytidylate kinase [Chlamydia trachomatis D/UW-3/CX] gi|9910743|sp|O84458|KCY_CHLTR RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|3328885|gb|AAC68052.1| CMP Kinase [Chlamydia trachomatis D/UW-3/CX] gi|297748583|gb|ADI51129.1| Cytidylate kinase [Chlamydia trachomatis D-EC] gi|297749463|gb|ADI52141.1| Cytidylate kinase [Chlamydia trachomatis D-LC] Length = 216 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|284030673|ref|YP_003380604.1| adenylylsulfate kinase [Kribbella flavida DSM 17836] gi|283809966|gb|ADB31805.1| adenylylsulfate kinase [Kribbella flavida DSM 17836] Length = 493 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 GL + F G+ G+GK+T L L V + + R +L S Sbjct: 283 RGLVVFFTGLSGSGKSTLAKGLAEQLAGAGRSVTLL-------DGDVVRRMLSSG 330 >gi|281341158|gb|EFB16742.1| hypothetical protein PANDA_005138 [Ailuropoda melanoleuca] Length = 604 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 39 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 84 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 85 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 132 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 133 FFEVFVDAPLHVCEQR 148 >gi|217964290|ref|YP_002349968.1| dephospho-CoA kinase [Listeria monocytogenes HCC23] gi|217333560|gb|ACK39354.1| dephospho-CoA kinase [Listeria monocytogenes HCC23] Length = 200 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 78/216 (36%), Gaps = 32/216 (14%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60 G+ G+ GK+T +++++ L + EPG E +LL+ G Sbjct: 6 GLTGSVATGKSTVSNMIQQAGIPLVDADVAARKVVEPGTEGLKEIVAYFGGEILLADGTL 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E I + + + + P + + + +RF + + LF L Sbjct: 66 DRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFRAGE--ELVFFDIPLLFESHL 123 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179 + + Q V + + LKR+ R +L + L E + + I EK R+ F Sbjct: 124 ESLVDQIV----VVW--TTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++D+ S + + + V+ + Sbjct: 175 ----------VIDNNESLEKTQKQVYTFIERFVKNK 200 >gi|160941491|ref|ZP_02088825.1| hypothetical protein CLOBOL_06381 [Clostridium bolteae ATCC BAA-613] gi|158435575|gb|EDP13342.1| hypothetical protein CLOBOL_06381 [Clostridium bolteae ATCC BAA-613] Length = 260 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 M SG FIS G G GK+T + L+ Sbjct: 36 MKSGEFISLVGPSGCGKSTILRLVA 60 >gi|110799126|ref|YP_694533.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens ATCC 13124] gi|170764105|ref|ZP_02632153.2| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens E str. JGS1987] gi|87312655|gb|ABD37693.1| deoxyadenosine kinase [Clostridium perfringens] gi|110673773|gb|ABG82760.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens ATCC 13124] gi|170662358|gb|EDT15041.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens E str. JGS1987] Length = 203 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 17 KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74 K+T +++L + EP + +L + + + F Sbjct: 12 KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 58 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127 R H++ L+E + DR + + + ++ L+ + Sbjct: 59 RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 113 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186 P + L++ VD +KR+Q R E ER+ EK + + N Sbjct: 114 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 166 Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223 ++ F++V + V L+ +++S L + K Sbjct: 167 PILRINVDELDFENVPED-REYVLNLIDEKLSELENNK 203 >gi|302385090|ref|YP_003820912.1| ABC transporter [Clostridium saccharolyticum WM1] gi|302195718|gb|ADL03289.1| ABC transporter related protein [Clostridium saccharolyticum WM1] Length = 234 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 8/50 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAE 48 +N G FI G G+GK+T +++L + T GTP + Sbjct: 31 INRGEFIVILGPSGSGKSTLLNIL------GGIETVTGGTVYYDGTPLSW 74 >gi|300175321|emb|CBK20632.2| Arginine/ornithine transport system ATPase [Blastocystis hominis] Length = 388 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 7/91 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64 G GAGK+T L L + + V + +P GG+ + R + L+ + F Sbjct: 115 GPPGAGKSTFCEALGTLLTSQGHRVAVLAIDPSSTRSGGSLLGDKTRMLKLAYDPNAFVR 174 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94 + + +H +++ G I++ Sbjct: 175 PSPSNCSLGGVAEHTSDLVMLCEAAGYDIVI 205 >gi|269303122|gb|ACZ33222.1| adenylate kinase [Chlamydophila pneumoniae LPCoLN] Length = 213 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 28/154 (18%) Query: 1 MNSG-LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G +FI G G+GK T L + T + R ++ Sbjct: 1 MTKGSVFIIM-GPPGSGKGTQSQYLANRI---GLPHIST--------GDLLRAIIQEGTP 48 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEG---KILLCDRFLDSSYAYQGERDSSQHLF 116 + A+A A D V +++ L K + D F + + Sbjct: 49 NGLKAKAYLDKGAFVPSDFVWEILKEKLQSQACSKGCIIDGFPRTL----DQAHLLDSFL 104 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 +D + I L++ D LKRV +R Sbjct: 105 MDVHSNYT--------VIFLEISEDEILKRVCSR 130 >gi|299821484|ref|ZP_07053372.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, ABC protein [Listeria grayi DSM 20601] gi|299817149|gb|EFI84385.1| spermidine/putrescine ABC superfamily ATP binding cassette transporter, ABC protein [Listeria grayi DSM 20601] Length = 364 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F + G G GKTT + L+ FL+ + +H+ Sbjct: 31 RGKFYTLLGPSGCGKTTILRLIAGFLEATDGKIHL 65 >gi|205373693|ref|ZP_03226496.1| hypothetical protein Bcoam_10710 [Bacillus coahuilensis m4-4] Length = 255 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 19/41 (46%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 N G + FEG + AGK I L L + +VH T P Sbjct: 53 NKGCILVFEGWDAAGKGGTIKRLTEGLDPRGIEVHATAAPT 93 >gi|254448895|ref|ZP_05062350.1| guanylate kinase [gamma proteobacterium HTCC5015] gi|198261432|gb|EDY85722.1| guanylate kinase [gamma proteobacterium HTCC5015] Length = 203 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 47/171 (27%), Gaps = 32/171 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G + GAGKT+ + L ++ V H TRE + Sbjct: 1 MAKGTLYTISAPSGAGKTSLVKALLDSVEGIGVSVSHTTREKRPGEEHGVDYFFVSHEAF 60 Query: 60 DEF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A E R + + L G+ ++ Sbjct: 61 IAMVEDSAFLEHAQVFRNRYGTSQKAVEETLQSGRDVIL---------------EIDWQG 105 Query: 117 LDSLQEISVQEVMPDCT---IILDLPVDIGL--KRVQNRYSLRESACLDYF 162 + +++ + PDC I +P + R++ R S + Sbjct: 106 MQQVKK-----LRPDCVAVSI---VPPSLAALEARLRGRESDSDEEIAHRM 148 >gi|149698484|ref|XP_001503628.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase 1 (PAPS synthetase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) [Equus caballus] Length = 603 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 38 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 84 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 132 FFEVFVDAPLHVCEQR 147 >gi|118443732|ref|YP_877898.1| ABC-type multidrug/protein/lipid transport system, ATPase [Clostridium novyi NT] gi|118134188|gb|ABK61232.1| ABC-type multidrug/protein/lipid transport system, ATPase [Clostridium novyi NT] Length = 619 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-------- 53 G I+ G GAGKTT I+LL RF + + + + E E R + Sbjct: 397 KKGETIAIVGPTGAGKTTLINLLMRFYEINSGTITIDGEDIRNLKRENLRSIFGMVLQDT 456 Query: 54 -LLSCGVDEFGAE-----AEAIVFAAARLDHVENVIRPALMEGKILLCD 96 L + + E A E + AA+ H ++ IR L G + D Sbjct: 457 WLFNGTIRENIAYGVENATEEDIINAAKAAHADHFIR-TLEHGYDTVLD 504 >gi|126700208|ref|YP_001089105.1| guanylate kinase [Clostridium difficile 630] gi|254976180|ref|ZP_05272652.1| guanylate kinase [Clostridium difficile QCD-66c26] gi|255093569|ref|ZP_05323047.1| guanylate kinase [Clostridium difficile CIP 107932] gi|255101753|ref|ZP_05330730.1| guanylate kinase [Clostridium difficile QCD-63q42] gi|255307621|ref|ZP_05351792.1| guanylate kinase [Clostridium difficile ATCC 43255] gi|255315314|ref|ZP_05356897.1| guanylate kinase [Clostridium difficile QCD-76w55] gi|255517981|ref|ZP_05385657.1| guanylate kinase [Clostridium difficile QCD-97b34] gi|255651097|ref|ZP_05397999.1| guanylate kinase [Clostridium difficile QCD-37x79] gi|260684162|ref|YP_003215447.1| guanylate kinase [Clostridium difficile CD196] gi|260687821|ref|YP_003218955.1| guanylate kinase [Clostridium difficile R20291] gi|306520948|ref|ZP_07407295.1| guanylate kinase [Clostridium difficile QCD-32g58] gi|119371204|sp|Q182S8|KGUA_CLOD6 RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|115251645|emb|CAJ69478.1| Guanylate kinase (GMP kinase) [Clostridium difficile] gi|260210325|emb|CBA64654.1| guanylate kinase [Clostridium difficile CD196] gi|260213838|emb|CBE05828.1| guanylate kinase [Clostridium difficile R20291] Length = 205 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 26/167 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL + G GAGK T L + V TR+P + + Sbjct: 4 KKGLLLVVSGPSGAGKGTICKELLKENDTIKLSVSATTRKPRTGEVDGVNYFFISKEKFE 63 Query: 61 EFGAEAEAIVFA---AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E + E + +A + I L +G+ +L + QG + Sbjct: 64 EMIEKGEFLEYAQIYDNFYGTPKAAIMECLEKGQDVLLE------IEMQGAK-------- 109 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 ++E+ + I LP + R+ R + E+ F Sbjct: 110 -QIKEVCPEG-----VFIFVLPPSLEELKNRIVGRGTETEAEIEKRF 150 >gi|6754982|ref|NP_035993.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Mus musculus] gi|6647719|sp|Q60967|PAPS1_MOUSE RecName: Full=Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1; Short=PAPS synthase 1; Short=PAPSS 1; AltName: Full=Sulfurylase kinase 1; Short=SK 1; Short=SK1; Includes: RecName: Full=Sulfate adenylyltransferase; AltName: Full=ATP-sulfurylase; AltName: Full=Sulfate adenylate transferase; Short=SAT; Includes: RecName: Full=Adenylyl-sulfate kinase; AltName: Full=3'-phosphoadenosine-5'-phosphosulfate synthase; AltName: Full=APS kinase; AltName: Full=Adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenylylsulfate 3'-phosphotransferase gi|1109676|gb|AAC52328.1| ATP sulfurylase/APS kinase [Mus musculus] gi|74138830|dbj|BAE27221.1| unnamed protein product [Mus musculus] gi|74139533|dbj|BAE40904.1| unnamed protein product [Mus musculus] gi|74142227|dbj|BAE31878.1| unnamed protein product [Mus musculus] gi|74223304|dbj|BAE40782.1| unnamed protein product [Mus musculus] gi|148680251|gb|EDL12198.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1, isoform CRA_b [Mus musculus] gi|1586680|prf||2204316A ATP sulfurylase-adenosine phosphosulfate kinase Length = 624 Score = 39.2 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|312109950|ref|YP_003988266.1| dephospho-CoA kinase [Geobacillus sp. Y4.1MC1] gi|311215051|gb|ADP73655.1| dephospho-CoA kinase [Geobacillus sp. Y4.1MC1] Length = 199 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 30/211 (14%) Query: 11 GIEG---AGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ G +GK+T +++ + DV E +A +L + Sbjct: 6 GLTGGIASGKSTVTKMIRELGIPVIDADQIARDVVKMGEEAYNQIIQAFGQKILQEDGEI 65 Query: 62 FGAEAEAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A+ AIVF + ++ PA+ R L AY + + L + L Sbjct: 66 DRAKLGAIVFHNEQERKKLNAIVHPAVRR-------RMLAEKEAYVQKGAKTVVLDIPLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 E + ++ D TI++ + D+ L+R+ R + L + + + EK ++ Sbjct: 119 FESELTHLV-DKTIVVYVDDDVQLERLMKRNGFSKEEALARI-QAQMPLREKVKK----- 171 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 A ++D+ + + + I Sbjct: 172 ADA------VIDNNGTIEETKQQLWQIFKRW 196 >gi|148906335|gb|ABR16323.1| unknown [Picea sitchensis] Length = 269 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 18/127 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64 G G+GK+T+ L++ + VH+ E A R ++ L +DE Sbjct: 9 GPAGSGKSTYCYNLQQHCESIGRSVHIVNLDPAAEDFKYSVAIDIRELISLEDVMDELNL 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ-------HLFL 117 + ++H+E + L E L D D + F+ Sbjct: 69 GPNGGLIYC--MEHLEENLEDWLAEQ---LEDYLDDDYLVFDCPGQIELYSHIPVFRTFV 123 Query: 118 DSLQEIS 124 D L+ + Sbjct: 124 DQLRRWN 130 >gi|239617173|ref|YP_002940495.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1] gi|239617190|ref|YP_002940512.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1] gi|239506004|gb|ACR79491.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1] gi|239506021|gb|ACR79508.1| ABC transporter related [Kosmotoga olearia TBF 19.5.1] Length = 209 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG-- 58 G F+ +G+ G+GK+T + +L + +V +EP P +++ Sbjct: 28 KKGEFVYIKGLNGSGKSTLLKILCGLIPPTTGNVSVFGKEPHRNPEILKRLGIVIDGMGL 87 Query: 59 VDEFGAEAEAIVFA 72 E ++FA Sbjct: 88 YRELSLRENILLFA 101 >gi|218898082|ref|YP_002446493.1| hypothetical protein BCG9842_B2224 [Bacillus cereus G9842] gi|218544280|gb|ACK96674.1| hypothetical protein BCG9842_B2224 [Bacillus cereus G9842] Length = 282 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|126649539|ref|ZP_01721780.1| UDP-galactose-lipid carrier transferase [Bacillus sp. B14905] gi|126593864|gb|EAZ87787.1| UDP-galactose-lipid carrier transferase [Bacillus sp. B14905] Length = 269 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 39/158 (24%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL + FEG++ AGK I L + + Y VH P Sbjct: 43 GLILVFEGMDAAGKGGAIKRLIERVDPRGYVVHPISAPQPHEL----------------- 85 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG-ERDSSQHLFLDSLQE 122 R ++++ R G+I + DR + E +++ + + +E Sbjct: 86 -----------RYNYLQRFWRKLPQHGQIAVFDRSWYGRVLVERIEGFATKDEWSRAYEE 134 Query: 123 ISVQEVMPDCT--------IILDLPVDIGLKRVQNRYS 152 I+ E + T L + + LKR + R Sbjct: 135 INNFEKI--LTAGDYIIIKFWLHVSDEEQLKRFKEREQ 170 >gi|74002085|ref|XP_863048.1| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 3 [Canis familiaris] Length = 600 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 60 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 105 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 106 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 153 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 154 FFEVFVDAPLHVCEQR 169 >gi|20090290|ref|NP_616365.1| hypothetical protein MA1430 [Methanosarcina acetivorans C2A] gi|19915289|gb|AAM04845.1| hypothetical protein MA_1430 [Methanosarcina acetivorans C2A] Length = 237 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 4/75 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCG- 58 + G F G GAGKTT + L+ L+ V V+ + + V +LS Sbjct: 27 LKKGEFAVIFGPNGAGKTTLLKLISTLLEPTGGSVFVSGFNVSEEPEKVRKEVGMLSHDS 86 Query: 59 --VDEFGAEAEAIVF 71 E A F Sbjct: 87 YLYGELTARENLHFF 101 >gi|222823354|ref|YP_002574928.1| adenylylsulfate kinase [Campylobacter lari RM2100] gi|222538576|gb|ACM63677.1| adenylylsulfate kinase [Campylobacter lari RM2100] Length = 168 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 7/69 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G+ G+GK+T L L+R+ ++ + R +L G D Sbjct: 1 MKKPYVIWLTGLAGSGKSTIGRALYEKLKRECENIIYL-------DGDELRELLGHYGYD 53 Query: 61 EFGAEAEAI 69 + G A+ Sbjct: 54 KQGRIDVAL 62 >gi|328772508|gb|EGF82546.1| hypothetical protein BATDEDRAFT_4816 [Batrachochytrium dendrobatidis JAM81] Length = 259 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 33/145 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAAR-------HVLL 55 LF++ G +G+GKTT + L + L ++ V ++ + AE + LL Sbjct: 2 LFVALSGPQGSGKTTLVKELVKELDQRVGLKAVALSADDLYLTHAEQVILANTHKSNTLL 61 Query: 56 S----CGVDEFGAEAEAIVFAAARLDHVENVI-RPALMEGKILLCDRFLDSSYAYQGERD 110 G + + A + +H+ N + P D S YQG D Sbjct: 62 QYRGLPGTHGISLGVQVLSHLARQNEHINNSVSIPC------------YDKSL-YQGRGD 108 Query: 111 SSQHLFLDSLQEISVQEVMPDCTII 135 +D L +V + D + Sbjct: 109 R-----MDELHWKTVTGPV-DIVLF 127 >gi|326789654|ref|YP_004307475.1| Taurine-transporting ATPase [Clostridium lentocellum DSM 5427] gi|326540418|gb|ADZ82277.1| Taurine-transporting ATPase [Clostridium lentocellum DSM 5427] Length = 277 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 8/59 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 +N G FIS G G GKTT + ++ LQ E T E R + L Sbjct: 54 INQGEFISLLGPSGCGKTTLLRIIADLLQ--------PTEGSITVRGETPRSIRLQKKY 104 >gi|289551638|ref|YP_003472542.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus lugdunensis HKU09-01] gi|289181169|gb|ADC88414.1| Deoxyadenosine kinase/Deoxyguanosine kinase [Staphylococcus lugdunensis HKU09-01] Length = 224 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 50/168 (29%), Gaps = 29/168 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L L + + E L D+F + Sbjct: 12 ITIAGTVGVGKSTLTRALADKL-----NFKTSFENVDQNP-------YLDKFYDDFERWS 59 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117 + F A R + G + DR + +A QG Sbjct: 60 FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHQEQGTMSPEDFQTY 115 Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDY 161 L + + PD I L+ D ++R++ R E DY Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECNYDEVIERIKQRGRDMEINTEPDY 163 >gi|227499521|ref|ZP_03929628.1| guanylate kinase [Anaerococcus tetradius ATCC 35098] gi|227218400|gb|EEI83651.1| guanylate kinase [Anaerococcus tetradius ATCC 35098] Length = 202 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 4/98 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G + G G GK T + L Y V TR+ + Sbjct: 1 MKKGFLLVISGPSGVGKGTVLHDLMNTQSNLVYSVSATTRKKRDGEIEGVSYFYKSHEEF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILL 94 ++ E + + +A ++ + + + EGKI++ Sbjct: 61 EKMIEEDKFLEYAHVHNNYYGTPKEFVENKINEGKIVI 98 >gi|222479157|ref|YP_002565394.1| PilT protein domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222452059|gb|ACM56324.1| PilT protein domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 633 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 G+ IS G GAGK+T + FL +Y V +P Sbjct: 261 KRGVLIS--GSPGAGKSTFAQAVAEFLNDNDYAVKTMEKPRDLQVGPEI 307 >gi|148643420|ref|YP_001273933.1| signal recognition particle protein Srp54 [Methanobrevibacter smithii ATCC 35061] gi|222445662|ref|ZP_03608177.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii DSM 2375] gi|288869608|ref|ZP_05975207.2| signal recognition particle protein [Methanobrevibacter smithii DSM 2374] gi|148552437|gb|ABQ87565.1| signal recognition particle GTPase SRP54 [Methanobrevibacter smithii ATCC 35061] gi|222435227|gb|EEE42392.1| hypothetical protein METSMIALI_01303 [Methanobrevibacter smithii DSM 2375] gi|288860574|gb|EFC92872.1| signal recognition particle protein [Methanobrevibacter smithii DSM 2374] Length = 447 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53 I F G++G+GKTT I L R+LQ+K ++ V PAA E R + Sbjct: 104 ILFLGLQGSGKTTTIGKLCRYLQKKGFNPAVVCTDTWRPAAYEQLRQL 151 >gi|108763441|ref|YP_631530.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622] gi|108467321|gb|ABF92506.1| deoxynucleoside kinase family protein [Myxococcus xanthus DK 1622] Length = 204 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 62/186 (33%), Gaps = 22/186 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M FI+ G GAGKT S L R Y + + EP L+ Sbjct: 1 MARKKFIAIAGNIGAGKTELTSFLCRK-----YGLTPSFEPNDQNP-------YLADFYK 48 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQ 113 + + A L H + R +L DR + D+ + Q D Sbjct: 49 DM--KTWAFRSQLFFLTHKFRLHRELERTSGTVLQDRTLYEDAEIFAKNLHRQRLIDKRD 106 Query: 114 HLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L E + + P D I L PV +R++ R E + ++ ++E+ Sbjct: 107 WKTYCELYETISESLRPPDLMIYLRCPVQTIRERIRIRGRAMERDIPTRYLQRLNALYEE 166 Query: 173 RRQIFL 178 + + Sbjct: 167 WFEGYR 172 >gi|147902487|ref|NP_001086938.1| deoxycytidine kinase, gene 2 [Xenopus laevis] gi|37780365|gb|AAO64435.1| deoxycytidine kinase 2 [Xenopus laevis] gi|50417985|gb|AAH77796.1| Dck-prov protein [Xenopus laevis] Length = 264 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 62/186 (33%), Gaps = 32/186 (17%) Query: 8 SFEGIEGAGKTTHISLLKRFLQR---------KNYDVHVTR-EPGGTPAAEAARHVLLSC 57 S EG AGK+T + +L++ K +V T E ++ + LL Sbjct: 26 SIEGNIAAGKSTFVRILEKASDEWEVVPEPIAKWCNVQTTENENEELSTSQKSGGNLLQM 85 Query: 58 GVDEFGAEAEAIVFAAA----RLDHVENVIRPALMEGKI--------LLCDRFLD--SSY 103 D+ A A R P L+E + + DR++ S + Sbjct: 86 LYDKPTRWAYTFQTYACLSRVRAQL--KTPSPKLLEAEHPVQFFERSVYSDRYIFASSLF 143 Query: 104 AYQGERDSSQHLFLDSLQEISVQEVMPDC----TIILDLPVDIGLKRVQNRYSLRESA-C 158 +Q ++ ++ D + + D I L + + R+ R E Sbjct: 144 EFQNINETEWAIYQDW-HTWFLNQFESDIDLDGIIYLRATPEKCMDRLHTRGREEEQGIQ 202 Query: 159 LDYFER 164 L+Y E Sbjct: 203 LEYLES 208 >gi|58616346|ref|YP_195476.1| transposition helper protein [Azoarcus sp. EbN1] gi|56315808|emb|CAI10452.1| transposition helper protein [Aromatoleum aromaticum EbN1] Length = 265 Score = 39.2 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKT I+ L L + Y V TR +AAR L + ++ Sbjct: 110 GPPGVGKTHLIASLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELAKLDRFDLLI 169 Query: 71 ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 F+ R D E + L + +R+ S A Sbjct: 170 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 200 >gi|319946146|ref|ZP_08020389.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus australis ATCC 700641] gi|319747675|gb|EFV99925.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus australis ATCC 700641] Length = 252 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 58/164 (35%), Gaps = 29/164 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE----PGGTPAAEAARHVLLSCGVDE 61 FI+ G GAGK+T + L L + V + E G A+ V + Sbjct: 37 FITILGGNGAGKSTLFNTLAGTLPLTSGQVLIKGEDVTHYGPEKRAKYLSRVFQDPKMGT 96 Query: 62 FGAEA--EAIVFAAARLD---HVENVIRPALMEGKILLC------DRFLDSSYAY-QGER 109 E ++ A R + V + E K +L +R +D+S + G + Sbjct: 97 APRMTVAENLLIAKFRGEKRGLVPRRLAQYKDEFKEVLSQIGNGLERHVDTSVEFLSGGQ 156 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILD-----LPVDIGLKRVQ 148 + L + +L+ P+ ++LD L ++ Sbjct: 157 RQALSLLMATLK-------RPEL-LLLDEHTAALDPKTSQALME 192 >gi|256843874|ref|ZP_05549361.1| deoxyguanosine kinase [Lactobacillus crispatus 125-2-CHN] gi|256613779|gb|EEU18981.1| deoxyguanosine kinase [Lactobacillus crispatus 125-2-CHN] Length = 228 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 31/168 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQH--LFLDSLQ 121 + A + L+ + I+ AL E +L DR + + +Q D + +D+ Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTEDNNVL-DRSIYEDALFFQMNADIGRATSEEVDTYY 106 Query: 122 EI---SVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 E+ + E+ PD + +++ D +KR+Q R E D Sbjct: 107 ELLHNMMGELERMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSYD 154 >gi|242082796|ref|XP_002441823.1| hypothetical protein SORBIDRAFT_08g002910 [Sorghum bicolor] gi|241942516|gb|EES15661.1| hypothetical protein SORBIDRAFT_08g002910 [Sorghum bicolor] Length = 1122 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 27/91 (29%), Gaps = 11/91 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA---RHVLLSCGVDEFGAEA- 66 G G GKTT + L L V E G + + Sbjct: 159 GPPGCGKTTLLKALAGKLSTSGLKVTGEVEYNGVELSGFVPEKTAAYIDQYDLHVPEMTV 218 Query: 67 -EAIVFAA------ARLDHVENVIRPALMEG 90 E I F+A R + ++ VIR G Sbjct: 219 RETIDFSARFQGVGNRAEIMKEVIRREKEAG 249 >gi|172048109|sp|A5UMY7|SRP54_METS3 RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 Length = 445 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV 53 I F G++G+GKTT I L R+LQ+K ++ V PAA E R + Sbjct: 102 ILFLGLQGSGKTTTIGKLCRYLQKKGFNPAVVCTDTWRPAAYEQLRQL 149 >gi|78777990|ref|YP_394305.1| guanylate kinase [Sulfurimonas denitrificans DSM 1251] gi|119371317|sp|Q30PL1|KGUA_SULDN RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|78498530|gb|ABB45070.1| guanylate kinase [Sulfurimonas denitrificans DSM 1251] Length = 206 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 42/200 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G + G GAGK++ I + + + + T P + + +S + Sbjct: 4 KTGAILVLSGPSGAGKSSLIKEVIDDIGECYFSISTTTRPIREGEVDGVHYHFVSESEFK 63 Query: 62 FGAEAEAIV-FAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 E E + +A ++ I+P AL GK+++ D + Sbjct: 64 KDIEDEFFLEYAVVHSNYYGTSIKPVKKALKSGKLVIFD-----------IDVQGNATII 112 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + L +I+ + L ++ R R + D ER+ Sbjct: 113 NRLGDITTSVF---------ISPPT-LSELKKRLEARSTDTKDVIERR------------ 150 Query: 178 LDIARNQPDR-----CHIVD 192 +++A+ + R IV+ Sbjct: 151 IEMAKREMQRVSEYDFLIVN 170 >gi|78780067|ref|YP_398179.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus marinus str. MIT 9312] gi|108860874|sp|Q318F2|PANCY_PROM9 RecName: Full=Bifunctional pantoate ligase/cytidylate kinase; Includes: RecName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; AltName: Full=Pantothenate synthetase; Includes: RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|78713566|gb|ABB50743.1| cytidylate kinase [Prochlorococcus marinus str. MIT 9312] Length = 510 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 9/65 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV---------HVTREPGGTPAAEAAR 51 M I+ +G G+GK+T L+ + L+ D + +E + + Sbjct: 279 MKRSPIIAIDGPAGSGKSTVTQLIAKKLKLLYLDTGAMYRALSWLLIKENIDYKEEKKLQ 338 Query: 52 HVLLS 56 ++L Sbjct: 339 NILKD 343 >gi|325197349|gb|ADY92805.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis G2136] gi|325203177|gb|ADY98630.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis M01-240355] Length = 421 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|301168437|emb|CBW28027.1| putative adenylate kinase (ATP-AMP transphosphorylase) [Bacteriovorax marinus SJ] Length = 212 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 58/231 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GK T + L Y T + R+ + E G + + I+ Sbjct: 9 GAPGTGKGTQAKKIVENL---GYSHVST--------GDLLRNEI--AKDSELGKKVKGII 55 Query: 71 FAAARLDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 R D V + V+ L + +S+Y + G + + L L+E ++ Sbjct: 56 ---DRGDLVNDQVVLELLNANCDI-----ENSAYIFDGFPRNIEQAQL--LEEHVLKGA- 104 Query: 130 PD-CTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFERKDVMI 169 D I ++ +++ ++R+ NR +S + D RKD Sbjct: 105 -DSKAIYFNIDLEVLVERISNRRIAPKSGEIYNLLSRPPKVEGKCDVSGEDLIHRKDDNA 163 Query: 170 HEKRRQIFLDIARN---------QPDRCHI-VDSAHSFQSVATNILNIVWE 210 E R L++ +N + + +D++ S V ++ V + Sbjct: 164 -ETVRNR-LEVFKNTIAPILDYYESKGVLVSIDASRSADEVYGLVVEAVNK 212 >gi|284928958|ref|YP_003421480.1| Excinuclease ABC subunit A [cyanobacterium UCYN-A] gi|284809417|gb|ADB95122.1| Excinuclease ABC subunit A [cyanobacterium UCYN-A] Length = 951 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRK-NYDVHVTREPGGTPAAEAARHVLL 55 G ++ G+ G+GK+T I LL LQ + + E V++ Sbjct: 644 GKLVTITGVSGSGKSTLIKRLLYPALQNHLTKKIPFPKYLSEVKGLELIDKVII 697 >gi|256424173|ref|YP_003124826.1| ABC transporter [Chitinophaga pinensis DSM 2588] gi|256039081|gb|ACU62625.1| ABC transporter related [Chitinophaga pinensis DSM 2588] Length = 549 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 FI G G GKTT I+LL + + V + E Sbjct: 363 FIV--GGNGCGKTTFINLLTALCRAQGGKVFIDEE 395 >gi|28211497|ref|NP_782441.1| dithiobiotin synthetase [Clostridium tetani E88] gi|75542099|sp|Q893G4|BIOD_CLOTE RecName: Full=Dethiobiotin synthetase; AltName: Full=DTB synthetase; Short=DTBS; AltName: Full=Dethiobiotin synthase gi|28203938|gb|AAO36378.1| dethiobiotin synthetase [Clostridium tetani E88] Length = 227 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 M+ G+FI+ G + GKT +LL + L+++ + Sbjct: 1 MSKGVFITATGTD-VGKTYISALLVKKLKQQGINA 34 >gi|27526436|emb|CAC80070.1| phosphoribulokinase [Galdieria sulphuraria] Length = 448 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 53/177 (29%), Gaps = 33/177 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC-GVDEFGAEAE----A 68 G GK+T + + V TP E + L + AE A Sbjct: 123 GCGKSTFLRRVNEIF---GTKVSQ----SHTPQGELVTVICLDDFHTLDRKGRAEKKVTA 175 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + A + + I AL EG + + Y +Q + I ++ + Sbjct: 176 LNPEANNFELMYQQI-AALKEGYDI-----MKPIYNHQ-TGLIDPPELIQPNHIIVIEGL 228 Query: 129 MP----------DCTIILDLPVDI----GLKRVQNRYSLRESACLDYFERKDVMIHE 171 P D T+ LD+ ++ ++R + L E + + Sbjct: 229 HPWYDARMKQLLDFTVYLDISDEVKVAWKIQRDMAERGHKLENILASIESRKPDFQQ 285 >gi|304388845|ref|ZP_07370899.1| cell division protein FtsY [Neisseria meningitidis ATCC 13091] gi|304337211|gb|EFM03391.1| cell division protein FtsY [Neisseria meningitidis ATCC 13091] gi|325137247|gb|EGC59841.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis M0579] gi|325143381|gb|EGC65711.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis 961-5945] gi|325201235|gb|ADY96689.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis M01-240149] gi|325205143|gb|ADZ00596.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis M04-240196] Length = 421 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|289662109|ref|ZP_06483690.1| adenylate kinase [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668053|ref|ZP_06489128.1| adenylate kinase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 187 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 69/208 (33%), Gaps = 33/208 (15%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK T + LK T E + R + + A+ Sbjct: 4 VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 AR D V + I ++E ++ D + + + G + ++L + + Sbjct: 52 ----VMARGDLVSDDILLGMLEARLGQAD--VANGFILDGYPRNVAQA--NALDALLSEI 103 Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182 P D + LD+ ++ ++R+ R E D E KR Q++ D Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157 Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208 Q + VD S V I + Sbjct: 158 FYEQRGKLARVDGVGSLDEVLERIRKAL 185 >gi|266623569|ref|ZP_06116504.1| polyphosphate:AMP phosphotransferase [Clostridium hathewayi DSM 13479] gi|288864639|gb|EFC96937.1| polyphosphate:AMP phosphotransferase [Clostridium hathewayi DSM 13479] Length = 498 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 18/30 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 I FEG+ AGK T I+ L + L + ++V Sbjct: 43 IVFEGMGAAGKGTQINRLIQALDPRGFEVF 72 >gi|260102016|ref|ZP_05752253.1| cobalt ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus helveticus DSM 20075] gi|260084179|gb|EEW68299.1| cobalt ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus helveticus DSM 20075] Length = 554 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREP 41 G FI G G+GKTT ++ LK+ L K DV +T P Sbjct: 32 GDFIVIAGNTGSGKTTLLNHLKKELMPKGARTGDVQITETP 72 >gi|302876829|ref|YP_003845462.1| ABC transporter related [Clostridium cellulovorans 743B] gi|307687513|ref|ZP_07629959.1| ABC transporter, ATP-binding protein [Clostridium cellulovorans 743B] gi|302579686|gb|ADL53698.1| ABC transporter related [Clostridium cellulovorans 743B] Length = 264 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTRE 40 G FI+ G +GAGK+T ++++ + + V RE Sbjct: 30 KPGEFITIIGSDGAGKSTLLNIIAGAISPDQGEIVINKRE 69 >gi|254508809|ref|ZP_05120920.1| cell division protein FtsY [Vibrio parahaemolyticus 16] gi|219548266|gb|EED25280.1| cell division protein FtsY [Vibrio parahaemolyticus 16] Length = 412 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 215 GVNGVGKTTTIGKLAKQFQAEGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 270 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A +G +++ D Sbjct: 271 TGADSASVIYDAIESAKAKGVDVVIAD 297 >gi|194880365|ref|XP_001974420.1| GG21726 [Drosophila erecta] gi|190657607|gb|EDV54820.1| GG21726 [Drosophila erecta] Length = 4023 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 36/119 (30%), Gaps = 28/119 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G GK+T ++LLK+ L VH + R L ++ Sbjct: 1907 VVLVGPPGCGKSTIMALLKQALSGTQLKVHTISPKSMSRIQLLGR---LDADTRQWQDGV 1963 Query: 67 EAIVFAAARLD--HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A + HV ++CD S ++++L + Sbjct: 1964 LTHTAVAVNQEPSHV----------HSWIVCD-------------GSIDPEWIEALNSV 1999 >gi|153836505|ref|ZP_01989172.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] gi|149750103|gb|EDM60848.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] Length = 129 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 19/94 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ I G+ G+GKTT L + K+++ + E G Sbjct: 1 MSLAKLILIRGLPGSGKTTLAKRLVKDFDAKHFEADMYFEN--------------EKGEY 46 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 F +++ A R L +GKI++ Sbjct: 47 HFNP---SLLPQAHEW--CFEQTRKWLNKGKIVI 75 >gi|119872111|ref|YP_930118.1| GTP-binding signal recognition particle [Pyrobaculum islandicum DSM 4184] gi|158512993|sp|A1RS43|SRP54_PYRIL RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|119673519|gb|ABL87775.1| signal recognition particle subunit FFH/SRP54 (srp54) [Pyrobaculum islandicum DSM 4184] Length = 433 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 + G+EG+GKTT + L R+L ++ Y V + Sbjct: 97 KKPYLVLLLGVEGSGKTTTAAKLARYLVKRGYRVGLVE 134 >gi|15679321|ref|NP_276438.1| signal recognition particle protein Srp54 [Methanothermobacter thermautotrophicus str. Delta H] gi|3334341|sp|O27376|SRP54_METTH RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|2622427|gb|AAB85799.1| signal recognition particle protein SRP54 [Methanothermobacter thermautotrophicus str. Delta H] Length = 442 Score = 39.2 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 25/41 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 I F G++G+GKTT I L R+L++K + V V PAA Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142 >gi|304315442|ref|YP_003850589.1| signal recognition particle protein Srp54 [Methanothermobacter marburgensis str. Marburg] gi|302588901|gb|ADL59276.1| signal recognition particle protein Srp54 [Methanothermobacter marburgensis str. Marburg] Length = 442 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 25/41 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 I F G++G+GKTT I L R+L++K + V V PAA Sbjct: 102 ILFLGLQGSGKTTTIGKLARYLRKKGFTVGVVCTDTWRPAA 142 >gi|312140897|ref|YP_004008233.1| adenylate kinase [Rhodococcus equi 103S] gi|325675465|ref|ZP_08155149.1| adenylate kinase [Rhodococcus equi ATCC 33707] gi|311890236|emb|CBH49554.1| adenylate kinase [Rhodococcus equi 103S] gi|325553436|gb|EGD23114.1| adenylate kinase [Rhodococcus equi ATCC 33707] Length = 181 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 62/214 (28%), Gaps = 51/214 (23%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG------TPAAEAARHVLLSCGVDE 61 G GAGK T ++L L T + TP A+ L + Sbjct: 4 VLLGPPGAGKGTQAAILSEKL---GVPHISTGDLFRANIGQETPLGLEAKKYL---DAGD 57 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQHLFLD 118 AR V P G L D R +D + A +G + Sbjct: 58 LVPSEITNNMVKAR------VAEPDAANGF--LLDGFPRTVDQAKALEGILEGLGAKL-- 107 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 D + D+ ++ ++R+ R ++ + + R ++ Sbjct: 108 ------------DGVLAFDVDDEVVVERMLARGRADDTEDVIR---------NRMR-VYR 145 Query: 179 D----IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + + VD+ + + V L + Sbjct: 146 EETAPLLDYYAGQIVTVDAVGAVEEVNARALAAL 179 >gi|317129263|ref|YP_004095545.1| guanylate kinase [Bacillus cellulosilyticus DSM 2522] gi|315474211|gb|ADU30814.1| guanylate kinase [Bacillus cellulosilyticus DSM 2522] Length = 203 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 26/167 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G G GK T L++ Y V TR P Sbjct: 5 KGLLIVLSGPSGVGKGTVCGALRKHDTHIRYSVSATTRNPRTGEV---------DGVNYF 55 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F + + +H+ + + D + + Y E +S H + ++ Sbjct: 56 FKTKEQF--------EHMIENNQLLEWAKYV---DNYYGTPRTYVEETIASGHDVILEIE 104 Query: 122 ---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + V+E P+ I +P LK ++NR R + D + + Sbjct: 105 VQGALQVKETFPEGVFIFLMPP--SLKELRNRIEGRGTETKDLIDSR 149 >gi|255973253|ref|ZP_05423839.1| predicted protein [Enterococcus faecalis T1] gi|255976247|ref|ZP_05426833.1| conserved hypothetical protein [Enterococcus faecalis T2] gi|255964271|gb|EET96747.1| predicted protein [Enterococcus faecalis T1] gi|255969119|gb|EET99741.1| conserved hypothetical protein [Enterococcus faecalis T2] Length = 176 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT + L + L+ + + + R +L DE G Sbjct: 16 KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 65 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 109 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 110 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 139 >gi|294939695|ref|XP_002782548.1| hypothetical protein Pmar_PMAR025641 [Perkinsus marinus ATCC 50983] gi|239894255|gb|EER14343.1| hypothetical protein Pmar_PMAR025641 [Perkinsus marinus ATCC 50983] Length = 114 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 11/77 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G G+GK+ +L L T+ + R + L + Sbjct: 24 ITIDGPAGSGKSVVAEMLADSLSG------FTK----LDSGALYRSIALFVNEGDIKGGI 73 Query: 67 EAIVFAAARLDHVENVI 83 E++ + A R +E VI Sbjct: 74 ESLAYEAFRA-LLEQVI 89 >gi|217979345|ref|YP_002363492.1| signal recognition particle-docking protein FtsY [Methylocella silvestris BL2] gi|217504721|gb|ACK52130.1| signal recognition particle-docking protein FtsY [Methylocella silvestris BL2] Length = 483 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 34/144 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------VDEFG 63 G+ G+GKTT I L ++ V + G T A A + L G Sbjct: 280 GVNGSGKTTTIGKLAAQFSQEGRKVLLAA--GDTFRAAAIEQLRLWGDRLNCAVIAGNQG 337 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 ++A A+ F A R A G IL+ D R ++ + L++ Sbjct: 338 SDASALAFDAIRA---------ARESGADILIMD---------TAGRLQNRAELMAELEK 379 Query: 123 IS-----VQEVMPDCTII-LDLPV 140 I V+ P ++ LD V Sbjct: 380 IVRVMKKVEPAAPHAVLLVLDATV 403 >gi|149190691|ref|ZP_01868958.1| Cell division protein ZipA [Vibrio shilonii AK1] gi|148835457|gb|EDL52427.1| Cell division protein ZipA [Vibrio shilonii AK1] Length = 161 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 64/188 (34%), Gaps = 31/188 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I F G GAGKTT L+ + E L + + Sbjct: 5 GKLIFFCGKMGAGKTTQSKLIAAK-----QRAVLISED----------EWLAAHYPSQIQ 49 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + I F+ +++ ++ L G ++ D ++ Q SS + E+ Sbjct: 50 SFEDYIKFSTLIKPFIKSHVQSLLTVGVDVVMD--FPANTVRQRLWFSSLCSEVQCAHEL 107 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 L++P ++ L ++ R + +F+ +DV H Q F + N Sbjct: 108 Y----------YLNVPDEVCLVQIGKRRVEQPERA--HFDTEDV-FHH-VTQYFEEPTDN 153 Query: 184 QPDRCHIV 191 + V Sbjct: 154 EGLNIVKV 161 >gi|148978744|ref|ZP_01815124.1| cell division protein FtsY [Vibrionales bacterium SWAT-3] gi|145962165|gb|EDK27449.1| cell division protein FtsY [Vibrionales bacterium SWAT-3] Length = 411 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 214 GVNGVGKTTTIGKLAKQFQNEGKKVMLAA--GDTFRAAAVEQLQVWGQRNDVPVIAQH-- 269 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 270 TGADSASVIYDAIEAAKARGVDVVIAD 296 >gi|123967010|ref|YP_001012091.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus marinus str. MIT 9515] gi|123201376|gb|ABM72984.1| putative bifunctional enzyme; pantothenate synthetase/cytidylate kinase [Prochlorococcus marinus str. MIT 9515] Length = 509 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 16/29 (55%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M I+ +G G+GK+T L+ + L+ Sbjct: 278 MKRNPIIAIDGPAGSGKSTITKLIAKKLK 306 >gi|251779324|ref|ZP_04822244.1| lipid A export ATP-binding/permease protein MsbA [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083639|gb|EES49529.1| lipid A export ATP-binding/permease protein MsbA [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 593 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 + SG ++ G GAGKTT I+LL RF + + + + E R +L Sbjct: 374 IKSGQMVAIVGPTGAGKTTLINLLMRFYEIQGGSIKIDGVDSRDMKREDLRAIL 427 >gi|166154666|ref|YP_001654784.1| cytidylate kinase [Chlamydia trachomatis 434/Bu] gi|166155541|ref|YP_001653796.1| cytidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335936|ref|ZP_07224180.1| cytidylate kinase [Chlamydia trachomatis L2tet1] gi|226761647|sp|B0B825|KCY_CHLT2 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|238687483|sp|B0BC90|KCY_CHLTB RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|165930654|emb|CAP04151.1| cytidylate kinase [Chlamydia trachomatis 434/Bu] gi|165931529|emb|CAP07105.1| cytidylate kinase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 216 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|328880493|emb|CCA53732.1| hypothetical protein SVEN_0445 [Streptomyces venezuelae ATCC 10712] Length = 627 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 L ++ G +GAGK++ + L L + V Sbjct: 8 LLVAVSGPDGAGKSSLVGRLSALLAERGLTVV 39 >gi|325180322|emb|CCA14725.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 1232 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 18/123 (14%), Positives = 44/123 (35%), Gaps = 4/123 (3%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G AGKTT + L F + + + V++ P + + +++ + Sbjct: 864 VLTGGPCAGKTTSLERLSTFFRDRGFRVYIV--PEASTLLQTGGALVVDLKEKDILNFQW 921 Query: 68 AIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ + D ++ ++LCDR AY + + L ++++ Sbjct: 922 QLLKLQMSLEDSFYSLAMDT-KSPCVILCDRGAMDGSAYMSTDQWEELKYEHDLDTVTLR 980 Query: 127 EVM 129 + Sbjct: 981 DTR 983 >gi|254569556|ref|XP_002491888.1| Plasma membrane ATP binding cassette (ABC) transporter [Pichia pastoris GS115] gi|238031685|emb|CAY69608.1| Plasma membrane ATP binding cassette (ABC) transporter [Pichia pastoris GS115] gi|328351612|emb|CCA38011.1| Pleiotropic ABC efflux transporter of multiple drugs [Pichia pastoris CBS 7435] Length = 1484 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 24/141 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-------LLSCGVDEFG 63 G+ GAGKTT + +L + Y V G R + Sbjct: 863 GVSGAGKTTLLDVLADRIS---YGVIT----GDFFVNGQVRDASFQRSTGYVQQQDLHLD 915 Query: 64 AEA--EAIVFAAARLDHVENVIRPALMEGKIL--LCDRFLDSSYAYQGERDSSQHLFLDS 119 EA++F+A I P + + + D YA + L ++ Sbjct: 916 TSTVREALLFSACLRQ--SESI-PYKEKADYVEEIIDLLEMRLYADAVVGVPGEGLNVEQ 972 Query: 120 LQEISVQ---EVMPDCTIILD 137 + +++ PD + LD Sbjct: 973 RKRLTIGVELVAKPDLLLFLD 993 >gi|261855873|ref|YP_003263156.1| adenylate kinase [Halothiobacillus neapolitanus c2] gi|261836342|gb|ACX96109.1| adenylate kinase [Halothiobacillus neapolitanus c2] Length = 217 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 52/226 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T L Y V + R + + A+A Sbjct: 3 IVLLGAPGSGKGTQAKKLVDH-----YGVVQIS------TGDLLRAAVSAGTALGLTAKA 51 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD--R-FLDSSYAYQGERDSSQHLFLDSLQEI 123 A V + I A+++ ++ D R ++ + + + + L + + Sbjct: 52 -----AMDAGQLVSDDIVLAMIKERLDQADTKRGYILDGFPRNIAQAQALDVLLGEVNQP 106 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------------DYFER 164 I+LD+P + ++R+ R + ++ + + +R Sbjct: 107 LQAA------IVLDVPFEDLMQRLTGRQTCKQCGAVFNIYTHPSAQPGICDVCGGELIQR 160 Query: 165 KDV--MIHEKRRQIFLDIAR------NQPDRCHIVDSAHSFQSVAT 202 D EKR ++F + + ++ +D + Sbjct: 161 SDDNEATVEKRLKVFEEQTAPLIAFYEKQNKLARIDGTQPIDDITE 206 >gi|15030252|gb|AAH11392.1| PAPSS1 protein [Homo sapiens] gi|123980280|gb|ABM81969.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [synthetic construct] gi|123995093|gb|ABM85148.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [synthetic construct] Length = 603 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 38 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 84 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 132 FFEVFVDAPLHVCEQR 147 >gi|74002095|ref|XP_535683.2| PREDICTED: similar to Bifunctional 3-phosphoadenosine 5-phosphosulfate synthethase 1 (PAPS synthethase 1) (PAPSS 1) (Sulfurylase kinase 1) (SK1) (SK 1) isoform 1 [Canis familiaris] Length = 608 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 43 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 88 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 89 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 136 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 137 FFEVFVDAPLHVCEQR 152 >gi|127512354|ref|YP_001093551.1| adenylyl-sulfate kinase [Shewanella loihica PV-4] gi|126637649|gb|ABO23292.1| adenylylsulfate kinase [Shewanella loihica PV-4] Length = 209 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + R L + + + +L G + Sbjct: 41 FTGLSGSGKSTVANAVDRLLHDRGCNTY-----------------VLDGDNVRHGLNGDL 83 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++++ V + + G ++ S A+ ++ + L D L + Sbjct: 84 GFSDEDRVENIRRIGEVAKLFVDAGTLV--------STAFISPFNADRKLVRDLLA--AH 133 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 Q + + +D P+++ +R Sbjct: 134 QFIE----VFIDTPLEVCEQR 150 >gi|94311848|ref|YP_585058.1| deoxynucleoside kinase [Cupriavidus metallidurans CH34] gi|93355700|gb|ABF09789.1| deoxynucleoside kinase [Cupriavidus metallidurans CH34] Length = 213 Score = 39.2 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 29/196 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G+GK L R LQ P G A Sbjct: 8 IVIEGPVGSGKAALAQRLARHLQAA-------ELPDGARNNPFLERFYREPQRYAL---A 57 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLC------DRFLDSSYAYQGERDSSQHLFLDSL 120 + R+ ++ A++ G+ ++ DR + +S + + + L Sbjct: 58 MQLACLNQRVTQLQQ-WHSAMLAGQRMIGNFLFARDR-VYASLTLEADELALYDALAARL 115 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 Q + + D I+L + +R+ R ES D ++ + ++ Sbjct: 116 QAPAQRV---DLVIMLQATPSLLRERIARRGLPGESGI-------DEQYLQRLTDAYGEL 165 Query: 181 ARNQPD-RCHIVDSAH 195 + IVD+AH Sbjct: 166 FHRYDEAPVLIVDTAH 181 >gi|330954981|gb|EGH55241.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae Cit 7] Length = 442 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 302 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 357 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 358 TGADSASVIFDAVQAAKARGIDVLIAD 384 >gi|305663029|ref|YP_003859317.1| ABC transporter related [Ignisphaera aggregans DSM 17230] gi|304377598|gb|ADM27437.1| ABC transporter related [Ignisphaera aggregans DSM 17230] Length = 258 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 70/251 (27%) Query: 7 ISFE----------GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--- 53 I+ E G GAGKTT + ++ R L+ V++ G R + Sbjct: 21 ITLEVGEGENLYIIGPNGAGKTTLLKVIARVLEPLKGVVYI---DGKDYRLYNPRELAKM 77 Query: 54 --LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + VD AR H +++ E ++ DR A D Sbjct: 78 ISYVDPHVDRSIPSTVYHFLLTARYPHQKSLQIVE-SEDDVVAIDR-----VAKAFGIDH 131 Query: 112 SQHLFLDSLQEISVQEV--------MPDCTI------ILDLPVDIGLKRVQNRYSLRESA 157 LD L +Q V P+ + LD+ RY + Sbjct: 132 LLDRRLDQLSSGELQRVVIARAFVQEPEIVLLDEPSAFLDI-----------RYRMEVLE 180 Query: 158 CLDYFERKD-----VMIHEKRRQIFLDIARNQPDRCHI-----VDSAHSFQSVA-----T 202 + F V IH+ L +A DR + + + + + V Sbjct: 181 YVKRFISSSNRVAIVAIHD------LYLASLYADRIAVLSNGRIVAVGTPEEVFSSRVIE 234 Query: 203 NILNIVWELVQ 213 ++ + EL+Q Sbjct: 235 DVYGVKIELIQ 245 >gi|229829152|ref|ZP_04455221.1| hypothetical protein GCWU000342_01237 [Shuttleworthia satelles DSM 14600] gi|229792315|gb|EEP28429.1| hypothetical protein GCWU000342_01237 [Shuttleworthia satelles DSM 14600] Length = 222 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 45/242 (18%), Positives = 73/242 (30%), Gaps = 59/242 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFG 63 I+ +G GAGK+T + + L Y T R + LL GVD Sbjct: 5 IAIDGPAGAGKSTIARRVAKEL---GYLYVDT--------GAMYRAIALFLLRSGVDLSD 53 Query: 64 AEAEAIVFAAARLDH-VENVIRPALMEGKILLCDRFLDSSYAY------QGERDSSQHLF 116 +A + + + L+ G+ + S S Sbjct: 54 EDAVSKQVKDCHVSLRYREGQQEVLLNGEDV-------SGLIRTEEVGNAASASSIYPKV 106 Query: 117 LDSL----------QEISVQE------VMPD--CTIILDLPVDI-GLKRV-----QNRYS 152 D L + + + V+P I L L+R Q + Sbjct: 107 RDQLTCLQRELAAQENLVMDGRDIGTTVLPHASLKIYLTASAKTRALRRAKEYEAQGKAF 166 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211 E D ER D +H K +A+ + +DS+ S V IL + E Sbjct: 167 DLEQIQRDIEERDDRDMHRKIS----PLAQAKDA--VRIDSSQMSIDQVVERILQLAEEE 220 Query: 212 VQ 213 ++ Sbjct: 221 IK 222 >gi|229079725|ref|ZP_04212258.1| uridine kinase [Bacillus cereus Rock4-2] gi|229190638|ref|ZP_04317634.1| uridine kinase [Bacillus cereus ATCC 10876] gi|228592771|gb|EEK50594.1| uridine kinase [Bacillus cereus ATCC 10876] gi|228703565|gb|EEL56018.1| uridine kinase [Bacillus cereus Rock4-2] Length = 189 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188 D TI +D P+DI + R R + +D D+ + R+ +L+ +P+ Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216 I+D + S + I + V EL ++ V Sbjct: 161 IILDGSLSVSEI---INHAVEELGRREV 185 >gi|229070030|ref|ZP_04203305.1| uridine kinase [Bacillus cereus F65185] gi|228713092|gb|EEL64992.1| uridine kinase [Bacillus cereus F65185] Length = 186 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188 D TI +D P+DI + R R + +D D+ + R+ +L+ +P+ Sbjct: 101 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 157 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216 I+D + S + I + V EL ++ V Sbjct: 158 IILDGSLSVSEI---INHAVEELGRREV 182 >gi|225630124|ref|YP_002726915.1| guanylate kinase [Wolbachia sp. wRi] gi|225592105|gb|ACN95124.1| guanylate kinase [Wolbachia sp. wRi] Length = 201 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 61/209 (29%), Gaps = 34/209 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ + GAGKTT + L V TR+P + E Sbjct: 7 GVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHEL 66 Query: 63 GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + +A + N I L G +L S +QG + + Sbjct: 67 CKAGQMLEYAKVFENFYGIPRNFIEQNLSNGISVLL------SIDWQGAFHLFKLMRKKV 120 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + IL P ++ ++ R R S ER + + + Sbjct: 121 VS-----------VFIL--PP--SMEELRLRLQKRNSDDASEIER-------RLAEAQKE 158 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 I++ I++ I +I+ Sbjct: 159 ISKRDKYDYVIIN--DDIDKSVEEISSIL 185 >gi|218200847|gb|EEC83274.1| hypothetical protein OsI_28627 [Oryza sativa Indica Group] Length = 681 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 75/243 (30%), Gaps = 55/243 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVLLSCGVDEF 62 G +GK T ++ + T + GT + A+ + + + Sbjct: 95 ISGAPASGKGTQCRMIVE---KYGLVHISTGDLLRAEVSSGTEIGKKAKEYMDNGMLVPD 151 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + V + +P + E L D + S Q Sbjct: 152 QVVTDMV---------VSRLSQPDVRERGW-LLDGYPRSY---------------AQAQS 186 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVM 168 + ++ PD I+L++P DI + R R E+ + + Sbjct: 187 LESMKIRPDIFIVLEVPDDILIDRCVGRRLDPETGKIYHIKNFPPENDEVSARLVTRSDD 246 Query: 169 IHEKRR---QIFLDIARN----QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 EK + + + + D + +D + V I +++ ++ + S + + Sbjct: 247 TFEKVKSRLETYKQNSEAVIPTYSDLLNQIDGNRQVEVVFNEIDSLLQKICENASSNMLA 306 Query: 222 KKD 224 K + Sbjct: 307 KTN 309 >gi|169823949|ref|YP_001691560.1| sugar ABC transportor ATP-binding protein [Finegoldia magna ATCC 29328] gi|167830754|dbj|BAG07670.1| sugar ABC transportor ATP-binding protein [Finegoldia magna ATCC 29328] Length = 352 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 MN G FI F G G GKTT + ++ Sbjct: 29 MNDGEFIVFVGPSGCGKTTTLRMIA 53 >gi|152980422|ref|YP_001354829.1| signal recognition particle receptor [Janthinobacterium sp. Marseille] gi|151280499|gb|ABR88909.1| signal recognition particle receptor [Janthinobacterium sp. Marseille] Length = 419 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 + I+ G+ GAGKTT I L + LQ N V + Sbjct: 222 MMIT--GVNGAGKTTTIGKLAKHLQAHNQSVLL 252 >gi|153807906|ref|ZP_01960574.1| hypothetical protein BACCAC_02192 [Bacteroides caccae ATCC 43185] gi|149129515|gb|EDM20729.1| hypothetical protein BACCAC_02192 [Bacteroides caccae ATCC 43185] Length = 217 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L I G G+GKTT + + L V + ++ ++ + D A Sbjct: 16 LIIGIAGGTGSGKTTVVRKIVESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 74 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 +++ HV L EGK + + + Q E + + ++ I Sbjct: 75 FEWSLL-----SKHVM-----MLKEGKSIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 124 Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ +M D I +D D L RV R + + Sbjct: 125 ALCDKKLRNIM-DLKIFVDADPDERLIRVIQRDVIERGRTAE 165 >gi|154253198|ref|YP_001414022.1| adenylate kinase [Parvibaculum lavamentivorans DS-1] gi|171769643|sp|A7HWT2|KAD_PARL1 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|154157148|gb|ABS64365.1| adenylate kinase [Parvibaculum lavamentivorans DS-1] Length = 205 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 40/233 (17%), Positives = 72/233 (30%), Gaps = 49/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G GAGK T L+ T + R + E G Sbjct: 2 KLILL-GPPGAGKGTQAKRLEE---AHGLVQLST--------GDMLRAAVAQGS--EVGK 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDR---------FLDSSYAYQGERDSSQHL 115 AE I+ AR + V + + ++ DR ++ + R+ +Q Sbjct: 48 VAEGIM---ARGELVPDDVVVG------IIADRIEQPDAVNGYILDGF----PRNVAQAE 94 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 LD + ++ + D + L + I LKR++ R + + + K Sbjct: 95 ALDKM--LAGKGTTLDAVVELGVDDSILLKRIETRAAETAGGPRADDNAEALAKRLKV-- 150 Query: 176 IFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSK 222 + + + VD S V I ++ + KR S+ Sbjct: 151 -YHEQTAPLIAYYKAKGKLRTVDGMKSMDEVTGQIETVLG--ISKRKGSWLSR 200 >gi|114573056|ref|XP_001142469.1| PREDICTED: similar to guanylate kinase 1 [Pan troglodytes] Length = 475 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 37/174 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRK----NYDV-HVTREPGGTPAAEAARHVLL 55 M+ + G GAGK+T LLKR LQ + V H TR P Sbjct: 67 MSGPRPVVLSGPSGAGKST---LLKRLLQEHSGIFGFSVSHTTRNPRPGE---------- 113 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 G D + E + R + I A G + + S A Q + ++ Sbjct: 114 ENGKDYYFVTREVM----QRDIAAGDFIEHAEFSGNL-----YGTSKVAVQAVQAMNRIC 164 Query: 116 FLDS----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYF 162 LD ++ I ++ P I + + P + +R++ R + E + + Sbjct: 165 VLDVDLQGVRNIKATDLQP---IYISVQPPSLHVLEQRLRQRNTETEESLVKRL 215 >gi|81428300|ref|YP_395300.1| guanylate kinase [Lactobacillus sakei subsp. sakei 23K] gi|119371233|sp|Q38XU0|KGUA_LACSS RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|78609942|emb|CAI54989.1| Guanylate kinase [Lactobacillus sakei subsp. sakei 23K] Length = 203 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 57/175 (32%), Gaps = 27/175 (15%) Query: 2 NSGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 N G+ I G G GK T +L+ + +Y V TR+P E Sbjct: 3 NRGMLIVLSGPSGVGKGTVRQAMLEDEFRDFHYSVSMTTRKP---RPGEQ------DGVD 53 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 F ++ E A L + + D + + Y + S L Sbjct: 54 YYFVSKEEFEQEIAND---------GMLEYAQYV--DNYYGTPMKYVNQTLESGRDVLLE 102 Query: 120 LQ---EISVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYFERKDVMI 169 ++ + V+E PD I P D R+Q R + ++ ++ I Sbjct: 103 IEVQGAMQVREKCPDGVFIFLTPPDLLELRNRIQKRGTDDQATIDKRMQKAADEI 157 >gi|84393534|ref|ZP_00992288.1| Signal recognition particle GTPase [Vibrio splendidus 12B01] gi|84375813|gb|EAP92706.1| Signal recognition particle GTPase [Vibrio splendidus 12B01] Length = 417 Score = 39.2 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 220 GVNGVGKTTTIGKLAKQFQSEGKKVMLAA--GDTFRAAAVEQLQVWGQRNNVPVIAQH-- 275 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 276 TGADSASVIYDAIEAAKARGVDVVIAD 302 >gi|330444192|ref|YP_004377178.1| Cytidylate kinase [Chlamydophila pecorum E58] gi|328807302|gb|AEB41475.1| Cytidylate kinase [Chlamydophila pecorum E58] Length = 216 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 8/25 (32%), Positives = 12/25 (48%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L L Sbjct: 1 MIITIDGPSGTGKSTIAKALADRLN 25 >gi|258513962|ref|YP_003190184.1| hypothetical protein Dtox_0642 [Desulfotomaculum acetoxidans DSM 771] gi|257777667|gb|ACV61561.1| hypothetical protein Dtox_0642 [Desulfotomaculum acetoxidans DSM 771] Length = 264 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 9/97 (9%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I EG+ G GK+T L L + E + L C Sbjct: 4 LIFIEGVSGVGKSTTAKKLCEALNVRGDSADCYLEGNVDNPVD-----LFCCACLSKPEF 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS 102 + +H+ ++ ++ E +L R+ D++ Sbjct: 59 TALLQNYPNEAEHL---LKNSIQESDYVLV-RYADTN 91 >gi|251773397|gb|EES53946.1| Shikimate kinase [Leptospirillum ferrodiazotrophum] Length = 180 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 71/210 (33%), Gaps = 43/210 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ F G G+GKTT L R L YD E A E + G + Sbjct: 3 RFVVFVGPRGSGKTTLGHALGRVLDAPVYDTDRMVE---DLAGEPLSRLWEREGEEA--- 56 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 F A +E ++ L G ++ G + +L+ + Sbjct: 57 ------FRAVESRALETLLT--LSPG--VVST----------GGGIVLRQENRQNLRRLG 96 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---IA 181 I L +P + L R+ + R R+ V + E+ RQ+ L+ + Sbjct: 97 Y-------VIYLHVPEEQLLSRLASGSERRPRL------RQGVSLEEEVRQVILERDPLY 143 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 R DR V S + IL+++ L Sbjct: 144 REVADRVLSV-GGASIATTLEEILSVLRPL 172 >gi|237802880|ref|YP_002888074.1| cytidylate kinase [Chlamydia trachomatis B/Jali20/OT] gi|237804802|ref|YP_002888956.1| cytidylate kinase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311264|ref|ZP_05353834.1| cytidylate kinase [Chlamydia trachomatis 6276] gi|255317566|ref|ZP_05358812.1| cytidylate kinase [Chlamydia trachomatis 6276s] gi|231273102|emb|CAX10015.1| cytidylate kinase [Chlamydia trachomatis B/TZ1A828/OT] gi|231274114|emb|CAX10908.1| cytidylate kinase [Chlamydia trachomatis B/Jali20/OT] Length = 216 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|187469049|gb|AAI66793.1| Papss1 protein [Rattus norvegicus] Length = 624 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|149243095|pdb|2PEY|A Chain A, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain Of Human Paps-Synthetase 1 gi|149243096|pdb|2PEY|B Chain B, Crystal Strucutre Of Deletion Mutant Of Aps-Kinase Domain Of Human Paps-Synthetase 1 gi|149243097|pdb|2PEZ|A Chain A, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain Of Human Paps-Synthetase 1 In Complex With Cyclic Paps And Dadp gi|149243098|pdb|2PEZ|B Chain B, Crystal Structrue Of Deletion Mutant Of Aps-Kinase Domain Of Human Paps-Synthetase 1 In Complex With Cyclic Paps And Dadp Length = 179 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 12 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 58 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 105 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 106 FFEVFVDAPLHVCEQR 121 >gi|118587696|ref|ZP_01545106.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Stappia aggregata IAM 12614] gi|118439318|gb|EAV45949.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Stappia aggregata IAM 12614] Length = 644 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 69/202 (34%), Gaps = 38/202 (18%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T S++++ L + L G + Sbjct: 467 FTGLSGSGKSTIASIVEKKLHIDGRHTYT-----------------LDGDNVRHGLNKDL 509 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 A R++++ V A L D L + ++ S + + D L++ E Sbjct: 510 GFTDADRVENIRRVGEVAK-----LFADAGLITLVSFISPFRSERQMARDLLED---GEF 561 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 + +D P++ + R A D E K+ + + A P+ Sbjct: 562 ---IEVFVDTPIEE----CRKRDPKGLYAKADRGEIKNFTGIDSPYE-----APENPE-L 608 Query: 189 HIVDSAHSFQSVATNILNIVWE 210 HI + + VA I+ + E Sbjct: 609 HIRNVGRDPEEVAEEIIEYLRE 630 >gi|91212399|ref|YP_542385.1| ATP-binding protein YghS [Escherichia coli UTI89] gi|117625291|ref|YP_854463.1| putative ATP-binding protein YghS [Escherichia coli APEC O1] gi|218560060|ref|YP_002392973.1| hypothetical protein ECS88_3367 [Escherichia coli S88] gi|237706268|ref|ZP_04536749.1| ATP-binding protein YghS [Escherichia sp. 3_2_53FAA] gi|91073973|gb|ABE08854.1| hypothetical ATP-binding protein YghS [Escherichia coli UTI89] gi|115514415|gb|ABJ02490.1| putative ATP-binding protein YghS [Escherichia coli APEC O1] gi|218366829|emb|CAR04599.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli S88] gi|226899308|gb|EEH85567.1| ATP-binding protein YghS [Escherichia sp. 3_2_53FAA] gi|281180026|dbj|BAI56356.1| conserved hypothetical protein [Escherichia coli SE15] gi|294491461|gb|ADE90217.1| putative lipoprotein [Escherichia coli IHE3034] gi|312947546|gb|ADR28373.1| hypothetical protein NRG857_14815 [Escherichia coli O83:H1 str. NRG 857C] gi|323951492|gb|EGB47367.1| yghS protein [Escherichia coli H252] gi|323957864|gb|EGB53578.1| yghS protein [Escherichia coli H263] Length = 237 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ +G +L+ DR+ Sbjct: 77 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 135 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 136 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 186 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 187 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 230 Query: 207 IVWELV 212 + + Sbjct: 231 AIHAAL 236 >gi|33303835|gb|AAQ02431.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [synthetic construct] Length = 604 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 38 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 84 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 132 FFEVFVDAPLHVCEQR 147 >gi|30021051|ref|NP_832682.1| hypothetical protein BC2934 [Bacillus cereus ATCC 14579] gi|229128279|ref|ZP_04257260.1| hypothetical protein bcere0015_27240 [Bacillus cereus BDRD-Cer4] gi|29896604|gb|AAP09883.1| hypothetical Cytosolic Protein [Bacillus cereus ATCC 14579] gi|228655138|gb|EEL10995.1| hypothetical protein bcere0015_27240 [Bacillus cereus BDRD-Cer4] Length = 282 Score = 38.9 bits (90), Expect = 0.47, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|332110851|gb|EGJ11028.1| sulfate adenylyltransferase, large subunit [Rubrivivax benzoatilyticus JA2] Length = 634 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L LL G + Sbjct: 466 FTGLSGAGKSTIANLVEKRLHALGRH-----------------SYLLDGDNVRHGLNKDL 508 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 A R+++V V R + G I+L Sbjct: 509 GFTEADRVENVRRVGEVARLMVDAGLIVLT 538 >gi|301165831|emb|CBW25404.1| guanylate kinase [Bacteriovorax marinus SJ] Length = 188 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 31/181 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M+ G I G GK+T I +K V + TR A + + Sbjct: 1 MSIGKIIVICAPSGTGKSTLIKKVKAEFTELIESVSYTTRPIREGEQNGVAYNFIDEKTF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD---RFLDSSYAYQGERDSSQ 113 E + E + +A ++ ++ + L +GK LL D + DS AY G++ Sbjct: 61 LEMKDDNEFLEWAKVHSNYYGTSKSFVESELEKGKNLLFDLDVQGADSFKAYFGDKAQ-- 118 Query: 114 HLFLDSLQEISVQEVMPDCTIILDLPVDI--GLKRVQNRYSLRESACLDYFERKDVMIHE 171 II P I KR++ R + E + Sbjct: 119 --------------------IIFIAPPSIVELEKRLRGRGTDSTGVIQIRLENAKREVLR 158 Query: 172 K 172 K Sbjct: 159 K 159 >gi|212696090|ref|ZP_03304218.1| hypothetical protein ANHYDRO_00626 [Anaerococcus hydrogenalis DSM 7454] gi|212676719|gb|EEB36326.1| hypothetical protein ANHYDRO_00626 [Anaerococcus hydrogenalis DSM 7454] Length = 216 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 MN+ I+ +G G+GK+T +LL + L+ Sbjct: 1 MNN-FIIALDGPSGSGKSTIANLLAKKLK 28 >gi|188036033|pdb|2PT5|A Chain A, Crystal Structure Of Shikimate Kinase (Aq_2177) From Aquifex Aeolicus Vf5 gi|188036034|pdb|2PT5|B Chain B, Crystal Structure Of Shikimate Kinase (Aq_2177) From Aquifex Aeolicus Vf5 gi|188036035|pdb|2PT5|C Chain C, Crystal Structure Of Shikimate Kinase (Aq_2177) From Aquifex Aeolicus Vf5 gi|188036036|pdb|2PT5|D Chain D, Crystal Structure Of Shikimate Kinase (Aq_2177) From Aquifex Aeolicus Vf5 Length = 168 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 63/194 (32%), Gaps = 49/194 (25%) Query: 15 AGKTTHISLLKRFLQRKNYDV---HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVF 71 +GK+T SLL R L YDV RE P + + + + E Sbjct: 11 SGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQ-------IFEKKGEAYFRKLEF--- 60 Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD 131 V++ + +++ ++L + Sbjct: 61 ---------EVLKDLSEKENVVIST-------------GGGLGANEEALNFXKSRGT--- 95 Query: 132 CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 T+ +D+P ++ L+R + +E L + + E+RR+I+ ++ V Sbjct: 96 -TVFIDIPFEVFLERCK---DSKERPLLKRPLDEIKNLFEERRKIY---SKAD----IKV 144 Query: 192 DSAHSFQSVATNIL 205 + V IL Sbjct: 145 KGEKPPEEVVKEIL 158 >gi|84490317|ref|YP_448549.1| signal recognition particle protein Srp54 [Methanosphaera stadtmanae DSM 3091] gi|121731822|sp|Q2NE47|SRP54_METST RecName: Full=Signal recognition 54 kDa protein; AltName: Full=SRP54 gi|84373636|gb|ABC57906.1| signal recognition particle, 54 kDa protein [Methanosphaera stadtmanae DSM 3091] Length = 444 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 16/126 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 G++G+GKTT + L + L++K + + PAA E R + + Sbjct: 106 GLQGSGKTTTTAKLVKHLKKKGHTSAIVCTDTWRPAAYEQLRQL-----TEPLDVPVFGD 160 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 +D + + + ++L D R + LD + E+ Q V Sbjct: 161 PENKDAIDLAKKGLEKCGSKYDVILVD---------TAGRHKEEKDLLDEMAEL-SQIVQ 210 Query: 130 PDCTII 135 PD I+ Sbjct: 211 PDEVIL 216 >gi|42782045|ref|NP_979292.1| hypothetical protein BCE_2989 [Bacillus cereus ATCC 10987] gi|42737969|gb|AAS41900.1| hypothetical protein BCE_2989 [Bacillus cereus ATCC 10987] Length = 282 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILNQNKIEVELFLE 39 >gi|58616284|ref|YP_195413.1| transposition helper protein [Azoarcus sp. EbN1] gi|56315745|emb|CAI10389.1| transposition helper protein [Aromatoleum aromaticum EbN1] Length = 255 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKT I+ L L + Y V TR +AAR L + ++ Sbjct: 100 GPPGVGKTHLIASLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELAKLDRFDLLI 159 Query: 71 ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 F+ R D E + L + +R+ S A Sbjct: 160 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 190 >gi|74096077|ref|NP_001027723.1| ATP sulfurylase/APS kinase [Ciona intestinalis] gi|9229920|dbj|BAB00629.1| ATP sulfurylase/APS kinase [Ciona intestinalis] Length = 618 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 11/58 (18%) Query: 1 MNSGLF----ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 M G F + F G+ GAGK+T L+ +L K P + + RH L Sbjct: 38 MGKGAFRGCTVWFTGLSGAGKSTLSMKLEEYLCSKGI-------PAYSLDGDNIRHGL 88 >gi|16329922|ref|NP_440650.1| adenylate kinase [Synechocystis sp. PCC 6803] gi|1652408|dbj|BAA17330.1| adenylate kinase [Synechocystis sp. PCC 6803] Length = 187 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 55/224 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55 M GL F G G+GK T L L T + R + L Sbjct: 3 MAKGLI--FLGAPGSGKGTQAVGLAETL---GIPHIST--------GDMLRQAIADGTEL 49 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDS 111 + + E + + +I L + +L D F R+ Sbjct: 50 GNQAKGYMDKGELVP-----DQLILGLIEERLGHKDAKAGWIL-DGF---------PRNV 94 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYF----ERK 165 +Q +FLD L + I L +P ++ ++R + R E+ + E+ Sbjct: 95 NQAIFLDEL--LVNIGHRTHWVINLKVPDEVIVERLLARGRADDNETTIRNRLLVYTEQT 152 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 ++ + + + +D +++ATN+ +V Sbjct: 153 APLM-----AYYQEQGKLYS-----LDGNQPVEAIATNLEKLVK 186 >gi|330957085|gb|EGH57345.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. maculicola str. ES4326] Length = 506 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 307 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 362 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 363 TGADSASVIFDAVQAAKARGIDVLIAD 389 >gi|324326911|gb|ADY22171.1| hypothetical protein YBT020_14705 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 282 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILNQNKIEVELFLE 39 >gi|326804561|ref|YP_004327432.1| putative uncharacterised protein [Salmonella phage Vi01] gi|301795211|emb|CBW37929.1| putative uncharacterised protein [Salmonella phage Vi01] Length = 220 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 37/173 (21%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK+T S L ++ N + +T P S GVD Sbjct: 37 GSNGSGKSTVPSYLAENDPQAYVVTYNGKIMLTVCPSYNIICIGKYDKSKSKGVDSLKD- 95 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 E ++FA + D E + L EG I S+ L Sbjct: 96 TEQMLFALSIADQPEYLKYDVLFEGII-------PSTL----------------LSSWIP 132 Query: 126 QEVMP--DCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + P + ++ D P++ + RV++R + D+ E V E+ Sbjct: 133 RLTRPPRELVVLFMDTPLETCVSRVKSR-----NGGADFNESLVVEKWERVHD 180 >gi|295098606|emb|CBK87696.1| dephospho-CoA kinase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 206 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 38/82 (46%), Gaps = 12/82 (14%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 D T+++D+ + ++R R ++ + ++ + R+ L IA + + Sbjct: 125 DRTLVIDVSRETQIQRTMARDNVSREHA------EQILAAQATREARLAIADD------V 172 Query: 191 VDSAHSFQSVATNILNIVWELV 212 +D+ + ++A+++ + + + Sbjct: 173 IDNNGAPDAIASDVARLHAQYL 194 >gi|156542428|ref|XP_001601528.1| PREDICTED: similar to guanylate kinase [Nasonia vitripennis] Length = 233 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41 I F G G+GK+T I LL K + V H TR P Sbjct: 31 IVFCGPSGSGKSTLIKLLFNEFPDKFGFSVSHTTRNP 67 >gi|329963983|ref|ZP_08301237.1| conserved domain protein [Bacteroides fluxus YIT 12057] gi|328526406|gb|EGF53420.1| conserved domain protein [Bacteroides fluxus YIT 12057] Length = 441 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 17/29 (58%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR 30 G I+ G +G+GK+T I+ + +L + Sbjct: 225 KPGYVIAVLGTDGSGKSTIINAITPWLNQ 253 >gi|325846626|ref|ZP_08169541.1| cytidylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481384|gb|EGC84425.1| cytidylate kinase [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 216 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 MN+ I+ +G G+GK+T +LL + L+ Sbjct: 1 MNN-FIIALDGPSGSGKSTIANLLAKKLK 28 >gi|325129220|gb|EGC52060.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis OX99.30304] Length = 421 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|317491951|ref|ZP_07950385.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920072|gb|EFV41397.1| ABC transporter [Enterobacteriaceae bacterium 9_2_54FAA] Length = 273 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 78/222 (35%), Gaps = 31/222 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAAR-HVLLSCG 58 + SG ++ G GAGK+T + LL FL + + R + AR ++ Sbjct: 36 LQSGEMVAIIGPNGAGKSTLMRLLTGFLPPSEGHCELQQRPLDEWSPRQLARTRAVMRQH 95 Query: 59 VDEFGAEAEAIVFAAARL---------DHVENVIRPALME-GKILLCDRFLDSSYAYQGE 108 D A + V A R +H + + + G +L DR A G Sbjct: 96 SDLAFAFSVREVVAMGRSPYPNQGRGGEHNLRAVEHVMAQTGCDILADR---DYRALSG- 151 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + + L ++ E P + LD L + +LR L E V Sbjct: 152 GEQQRVQLARVLAQLWQPEPQP-RWLFLD-EPTSALDLYHQQQTLRLLKSLTRSEPLGVC 209 Query: 169 --IHEKRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATN 203 +H+ L++A DR ++ + + Q V ++ Sbjct: 210 CILHD------LNLAALYADRILLLHQGQLVAQGTPQEVLSD 245 >gi|295132214|ref|YP_003582890.1| guanylate kinase [Zunongwangia profunda SM-A87] gi|294980229|gb|ADF50694.1| guanylate kinase [Zunongwangia profunda SM-A87] Length = 190 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 31/221 (14%), Positives = 77/221 (34%), Gaps = 38/221 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL--KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 M G I F G+GKTT + L + L+ +R P + L Sbjct: 1 MKEGKLIVFSAPSGSGKTTIVRHLLKQDDLKLDFSISATSRAPRPNEIDGKDYYFLSLED 60 Query: 59 VDEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + E + V+ ++ + +GK ++ D Sbjct: 61 FKKKIKNDEFLEWEEVYRDNFYGTLKAEVERIWEKGKHVIFD------------------ 102 Query: 115 LFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +D + + ++++ P+ T+ + P ++ ++ R R++ +D + Sbjct: 103 --IDVVGGLDIKKIYPEKTLAVFVKPP--SIEELKIRLKKRKTESMDKIN-------MRV 151 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +++A P I++ + + ++V + ++K Sbjct: 152 AKASIELATA-PQFDFIIE-NNDLEVALKEAHDLVADFIKK 190 >gi|270291146|ref|ZP_06197369.1| deoxyguanosine kinase [Pediococcus acidilactici 7_4] gi|304385428|ref|ZP_07367773.1| deoxynucleoside kinase [Pediococcus acidilactici DSM 20284] gi|270280542|gb|EFA26377.1| deoxyguanosine kinase [Pediococcus acidilactici 7_4] gi|304328635|gb|EFL95856.1| deoxynucleoside kinase [Pediococcus acidilactici DSM 20284] Length = 210 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 40/229 (17%), Positives = 76/229 (33%), Gaps = 40/229 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKT+ LL + G E+ + + Sbjct: 2 IALSGPIGAGKTSLTELLTQH-------------WGSDAYYESVDDNKILPLFYKDPKRY 48 Query: 67 EAIV---FAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLDS--- 119 ++ F RLD ++ +G + DR + S + D + + Sbjct: 49 AFLLQIYFLNKRLDSIKQA-----NDGFRSVMDRSIYEDSLLFHLNADLGRATETEVKIY 103 Query: 120 ---LQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L + + PD I +D+ D LKR++ R E D + Sbjct: 104 DSLLSNMMQELPRLSYKKNPDLLIHIDISFDTMLKRIKKRGRSYEQIENDP---SLYDYY 160 Query: 171 EKRRQIFLDIARNQPDRCHI-VDSAHSFQSVAT-NILNIVWELVQKRVS 217 ++ + ++ N I +D + V + V +LV++++S Sbjct: 161 KELNRRYVSWFENYDQSPKIRIDGDK-YDFVEEPSARQQVIQLVEEKIS 208 >gi|256958569|ref|ZP_05562740.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|257078123|ref|ZP_05572484.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|257086428|ref|ZP_05580789.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|307268815|ref|ZP_07550183.1| hypothetical protein HMPREF9498_00948 [Enterococcus faecalis TX4248] gi|307286917|ref|ZP_07566995.1| hypothetical protein HMPREF9505_00440 [Enterococcus faecalis TX0109] gi|256949065|gb|EEU65697.1| conserved hypothetical protein [Enterococcus faecalis DS5] gi|256986153|gb|EEU73455.1| conserved hypothetical protein [Enterococcus faecalis JH1] gi|256994458|gb|EEU81760.1| conserved hypothetical protein [Enterococcus faecalis D6] gi|306501975|gb|EFM71263.1| hypothetical protein HMPREF9505_00440 [Enterococcus faecalis TX0109] gi|306514943|gb|EFM83490.1| hypothetical protein HMPREF9498_00948 [Enterococcus faecalis TX4248] gi|315028029|gb|EFT39961.1| conserved hypothetical protein [Enterococcus faecalis TX2137] gi|315031636|gb|EFT43568.1| conserved hypothetical protein [Enterococcus faecalis TX0017] gi|315034921|gb|EFT46853.1| conserved hypothetical protein [Enterococcus faecalis TX0027] gi|315144587|gb|EFT88603.1| conserved hypothetical protein [Enterococcus faecalis TX2141] gi|315160983|gb|EFU05000.1| conserved hypothetical protein [Enterococcus faecalis TX0645] gi|315165568|gb|EFU09585.1| conserved hypothetical protein [Enterococcus faecalis TX1302] gi|327534706|gb|AEA93540.1| hypothetical protein OG1RF_10853 [Enterococcus faecalis OG1RF] gi|329578202|gb|EGG59607.1| hypothetical protein HMPREF9520_00025 [Enterococcus faecalis TX1467] Length = 177 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT + L + L+ + + + R +L DE G Sbjct: 17 KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 65 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 66 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 110 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 111 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 140 >gi|206971431|ref|ZP_03232381.1| hypothetical protein BCAH1134_2559 [Bacillus cereus AH1134] gi|206733416|gb|EDZ50588.1| hypothetical protein BCAH1134_2559 [Bacillus cereus AH1134] Length = 189 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 8/88 (9%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR-RQIFLDIARN-QPDRC 188 D TI +D P+DI + R R + +D D+ + R+ +L+ +P+ Sbjct: 104 DVTIFIDTPLDIAMARRILR--DFKEGTIDEIHN-DLEHYMTYARKAYLEAIHTVKPNSD 160 Query: 189 HIVDSAHSFQSVATNILNIVWELVQKRV 216 I+D + S + I + V EL ++ V Sbjct: 161 IILDGSLSVSEI---INHAVEELGRREV 185 >gi|168021975|ref|XP_001763516.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685309|gb|EDQ71705.1| predicted protein [Physcomitrella patens subsp. patens] Length = 190 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 39/212 (18%) Query: 11 GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK+T + + L D+ + GT + ++ + Sbjct: 3 GGPGSGKSTQCAKIVENFGFEHLSAG--DLLRAEQNSGTEIGNMIKDLIKEGKLVP---- 56 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + +I A+ E D+FL + R+ D + Sbjct: 57 ----------SEVTVKLILKAISEST---NDKFLIDGF----PRNEENREVWDRVT---- 95 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 + P+ + + + +RV +R R+ ++ + + +E L + + Sbjct: 96 -GLKPEFILFITGSEEEMERRVLSRTGGRDDDNVETIRNRFKVFNEST----LPVIKRYE 150 Query: 186 DR--CHIVDSAHSFQSVATNILNIVWELVQKR 215 H V+ HS V +I + +VQ R Sbjct: 151 TNTTVHKVNGLHSADEVFASIRPLFELIVQVR 182 >gi|148658619|ref|YP_001278824.1| shikimate kinase [Roseiflexus sp. RS-1] gi|148570729|gb|ABQ92874.1| shikimate kinase [Roseiflexus sp. RS-1] Length = 176 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 64/216 (29%), Gaps = 62/216 (28%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G+ G+GK+T LL L G + V++ + Sbjct: 8 IALVGLSGSGKSTVARLLAGRL--------------GWHMCDT------DAMVEQMTGRS 47 Query: 67 EAIVFA----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 +FA AA + + AL +++ G + L++ Sbjct: 48 IPALFAEEGEAAFRECESAALAAALARTPVVIAT----------GGGIVVRESNRVLLKD 97 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD----YFE---RKDVMIHEKRRQ 175 + + LD P + + R++ R D E + + + Sbjct: 98 QA-------LVVWLDAPTAVLIARLRTHEEERPLLAGDDPAVRLEALRAARLPFYRQVAH 150 Query: 176 IFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWE 210 I+D++ S VA I+ +V Sbjct: 151 -------------LILDTSQMSPLQVAERIIAVVTR 173 >gi|150388982|ref|YP_001319031.1| phosphonate ABC transporter, ATPase subunit [Alkaliphilus metalliredigens QYMF] gi|149948844|gb|ABR47372.1| phosphonate ABC transporter, ATPase subunit [Alkaliphilus metalliredigens QYMF] Length = 247 Score = 38.9 bits (90), Expect = 0.48, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 21/52 (40%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G F+S G GAGK+T I + R ++ + + + R + Sbjct: 30 KKGEFVSIIGPSGAGKSTLIRCINRLVEPSGGKIIFKEKDIVKARGKELRMI 81 >gi|325139507|gb|EGC62047.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis CU385] Length = 421 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|325135260|gb|EGC57883.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis M13399] Length = 421 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|318605916|emb|CBY27414.1| putative periplasmic protein kinase ArgK and related GTPases of G3E family [Yersinia enterocolitica subsp. palearctica Y11] Length = 331 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64 G GAGK+T + L L + + V + +P GG+ + R + LS F Sbjct: 61 GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 120 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94 + +I G I++ Sbjct: 121 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 151 >gi|313205640|ref|YP_004044817.1| deoxynucleoside kinase [Riemerella anatipestifer DSM 15868] gi|312444956|gb|ADQ81311.1| deoxynucleoside kinase [Riemerella anatipestifer DSM 15868] gi|315022629|gb|EFT35654.1| Deoxyadenosine kinase [Riemerella anatipestifer RA-YM] gi|325334932|gb|ADZ11206.1| Deoxynucleoside kinase [Riemerella anatipestifer RA-GD] Length = 204 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 59/190 (31%), Gaps = 33/190 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT +L + + + L + + Sbjct: 3 IAVTGNIGAGKTTLTKMLAKH------------YGWEAQFEDVDDNPYLDDFYHDMSKWS 50 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSSQHLFLDSLQE 122 A+ F +R V+ + GK ++ DR + D+ + + D Sbjct: 51 FALQIYFLGSRFRQVKEI----RESGKNIIQDRTIYEDAHIFAENLNEMQLLSDRDYKNY 106 Query: 123 ISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 S+ E+M PD I L V + ++ R E+ + K Sbjct: 107 TSLFELMKTFVSAPDLLIYLRASVPKLVGQIAKRGRDYEAEI-------SIDYLSKLNNK 159 Query: 177 FLDIARNQPD 186 + +N + Sbjct: 160 YESWIQNYKE 169 >gi|261391594|emb|CAX49032.1| cell division protein FtsY [Neisseria meningitidis 8013] Length = 421 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|260438043|ref|ZP_05791859.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM 2876] gi|292809522|gb|EFF68727.1| ABC transporter, ATP-binding protein [Butyrivibrio crossotus DSM 2876] Length = 251 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G FIS G G GK+T +S++ ++ + +V V G P + R++ Sbjct: 31 KKGQFISIVGPSGCGKSTLLSIICGLIEPTSGEVIV----NGRPVKDEMRNI 78 >gi|255348825|ref|ZP_05380832.1| cytidylate kinase [Chlamydia trachomatis 70] gi|255503365|ref|ZP_05381755.1| cytidylate kinase [Chlamydia trachomatis 70s] gi|255507043|ref|ZP_05382682.1| cytidylate kinase [Chlamydia trachomatis D(s)2923] gi|289525497|emb|CBJ14974.1| cytidylate kinase [Chlamydia trachomatis Sweden2] gi|296435053|gb|ADH17231.1| cytidylate kinase [Chlamydia trachomatis E/150] gi|296438773|gb|ADH20926.1| cytidylate kinase [Chlamydia trachomatis E/11023] Length = 216 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 14/25 (56%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G G GK+T L + LQ Sbjct: 1 MIITIDGPSGTGKSTLAKALAQTLQ 25 >gi|225873340|ref|YP_002754799.1| putative uridine kinase [Acidobacterium capsulatum ATCC 51196] gi|225791224|gb|ACO31314.1| putative uridine kinase [Acidobacterium capsulatum ATCC 51196] Length = 204 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 59/213 (27%), Gaps = 36/213 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT L R L K + + D A ++ Sbjct: 11 GCSGSGKTTLARELAREL--KGVPFLLDHYYRDLSHLSYEERCV--QNFDHPDAIETCLL 66 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV-- 128 ++ +E L + R+ ++ R + ++ I V + Sbjct: 67 -----IEQLEQ-----LAASHTIAQPRYDFAT----HTRRAGVEERMEPAACIVVDGIFA 112 Query: 129 --MP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR---QIF 177 P D ++ +D P + +R R E R + + Sbjct: 113 LYYPGLRRLYDLSVYVDAPDAVCYERRLARDIRERGRTP---ESVAGHYAATVRPMAERY 169 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 + + D IV S ++ + E Sbjct: 170 VRPSSQYAD--LIVQGTESLDWSVERVMAEIGE 200 >gi|162456225|ref|YP_001618592.1| adenylate kinase [Sorangium cellulosum 'So ce 56'] gi|189028367|sp|A9FGE0|KAD_SORC5 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|161166807|emb|CAN98112.1| Adenylate kinase [Sorangium cellulosum 'So ce 56'] Length = 215 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 61/225 (27%), Gaps = 39/225 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + G GAGK T LL T G EA R L + Sbjct: 1 MILVLVGPPGAGKGTQAKLLCARF---GIPQIST----GDMLREAKRSGTLEKRYLDIMD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEI 123 + A + P G L D F R Q LD L Sbjct: 54 SGGLLPDEAVIGLIARRTVEPDCSNGF--LLDGF---------PRTVPQADALDELLASA 102 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-----------DYFERKDVMIHEK 172 + D I LD+ + +R+ +R + + S + E + E Sbjct: 103 NQGGKRIDAVIQLDVARPLLEERLIHRRTDKRSGQIYHLVYNPPPPGAELEHRADDRPEA 162 Query: 173 RR---QIFLDIAR------NQPDRCHIVDSAHSFQSVATNILNIV 208 + + Q H VD + V +L+ + Sbjct: 163 VAKRLDAYEAMTAALLPFYEQKKLLHRVDGVGKPEEVTHRVLSAI 207 >gi|26541558|gb|AAN85545.1|AF484556_67 antibiotic resistance protein [Streptomyces atroolivaceus] Length = 539 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 9/73 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLLSC 57 + I+ G GAGKTT + +L L R+ ++ +EPG E+ Sbjct: 373 MLIT--GPNGAGKTTLLRVLADELAPDTGSVTRRGRIGYLPQEPGPGRPGESLLAAFARG 430 Query: 58 GVDEFGAEAEAIV 70 + E ++ Sbjct: 431 RSGQTAEHRERLL 443 >gi|18425199|ref|NP_569050.1| adenylylsulfate kinase, putative [Arabidopsis thaliana] gi|28393175|gb|AAO42019.1| putative adenylylsulfate kinase [Arabidopsis thaliana] gi|28827764|gb|AAO50726.1| putative adenylylsulfate kinase [Arabidopsis thaliana] gi|332010972|gb|AED98355.1| adenylylsulfate kinase [Arabidopsis thaliana] Length = 310 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 40/151 (26%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK++ L R L + +L Sbjct: 107 QKGCVIWITGLSGSGKSSLACALSRALHNRGK-----------------LSYILDGDNVR 149 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G ++ A R +++ V + G I + L S Y Sbjct: 150 HGLNSDLSFEADDRAENIRRVGEVAKLFADSGIICIA--SLISPY--------------- 192 Query: 119 SLQEISVQEVMP--DCT-IILDLPVDIGLKR 146 ++ + + ++P D + +D+P+ + R Sbjct: 193 RIERAACRALLPQGDFIEVFMDVPLHVCEAR 223 >gi|50120042|ref|YP_049209.1| shikimate kinase II [Pectobacterium atrosepticum SCRI1043] gi|81645895|sp|Q6D872|AROL_ERWCT RecName: Full=Shikimate kinase 2; Short=SK 2 gi|49610568|emb|CAG74013.1| shikimate kinase [Pectobacterium atrosepticum SCRI1043] Length = 173 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 28/210 (13%), Positives = 64/210 (30%), Gaps = 42/210 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G G GKTT L + L YD T V+ G Sbjct: 1 MTHPIFMV--GARGCGKTTVGHQLAQAL---GYDFVDTDLFMQQTTNMTVADVVAQEGWH 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F AL + + +R + ++ + ++ Sbjct: 56 GFRQRESL-----------------ALQQ---VASNRCIVAT--------GGGMVLAEAN 87 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLD 179 + + I L ++ +R++ + L +++ R+ Sbjct: 88 RRFMHDKG---IVIYLHADAELLAQRLEENPQDNQRPTLTGRPIAEEMADVLAAREALYR 144 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVW 209 A + H++D++ + ++ ++L + Sbjct: 145 GAAH-----HVIDASQTPDAIVVSVLKALR 169 >gi|302539762|ref|ZP_07292104.1| polyphosphate kinase 2 [Streptomyces hygroscopicus ATCC 53653] gi|302457380|gb|EFL20473.1| polyphosphate kinase 2 [Streptomyces himastatinicus ATCC 53653] Length = 304 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 34/123 (27%), Gaps = 31/123 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG + AGK I L + V +P + Sbjct: 78 IVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPTERERGQW----------------- 120 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + ++H+ G+I+L DR S Y G D + Q Sbjct: 121 ----YFQRYVEHLPT-------AGEIVLFDR---SWYNRAGVERVMGFCSEDEYRRFMRQ 166 Query: 127 EVM 129 M Sbjct: 167 APM 169 >gi|301105439|ref|XP_002901803.1| guanylate kinase [Phytophthora infestans T30-4] gi|262099141|gb|EEY57193.1| guanylate kinase [Phytophthora infestans T30-4] Length = 270 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 69/221 (31%), Gaps = 55/221 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G GK T I+LL + V H TR P A H D+ Sbjct: 82 IVIAGPSGVGKGTLINLLLEKFPNTFGFSVSHTTRGPREGEVDGVAYHF---TAKDKVLK 138 Query: 65 EAEAIVFAAARLDHVE----------NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 E EA +F L+H E ++ +GKI + D Sbjct: 139 EIEAGLF----LEHAEVHGNVYGTSKRAVQDVQEKGKICILD------------------ 176 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + + +Q++ + P + + P ++ ++ R R + D + + Sbjct: 177 IDIQGVQQVKKSGI-PAKYLFI-APP--SMEELEKRLRGRATETEDKI-------QLRVK 225 Query: 175 QIFLDIA-RNQPDRCHIVDS---AHSFQSVATNILNIVWEL 211 ++A QP D+ ++ + + Sbjct: 226 NAAGELAYGQQPGVF---DAILVNQVVDDSFRELVETLKQW 263 >gi|288941370|ref|YP_003443610.1| cytidylate kinase [Allochromatium vinosum DSM 180] gi|288896742|gb|ADC62578.1| cytidylate kinase [Allochromatium vinosum DSM 180] Length = 225 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 41/232 (17%), Positives = 72/232 (31%), Gaps = 37/232 (15%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 + +G G GK T + L L + + A R L + A Sbjct: 6 TIDGPSGTGKGTLMQRLAERL---GWHALDSGALYRVLGLAAGRQGLDLDDPEALTPLAA 62 Query: 68 AIV--FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERD--SSQHLFLDSLQEI 123 A+ F A R+ + A+ R ++ A + LD + Sbjct: 63 ALPVEFQAGRVLLSGEDVSDAI---------RTEEAGMAASRVAAHPGVRAALLDWQRRF 113 Query: 124 S-VQEVMPD-------------CTIILDLPVDIGLKRVQNRYSLRESACLDY-FERKDVM 168 + ++ D I LD +I R + RY + +D + Sbjct: 114 ARAPGLVADGRDMGTVVFPQARLKIFLDASPEI---RAERRYKQLKEKGVDANLPQLVAD 170 Query: 169 IHEK-RRQIFLDIARNQP-DRCHIVDSAH-SFQSVATNILNIVWELVQKRVS 217 I E+ R +A P + +VDS S V +L V + + ++ Sbjct: 171 IRERDARDRSRPVAPLCPAEDAVLVDSTQMSIAEVLDRVLEEVRRVFPEAIA 222 >gi|229145531|ref|ZP_04273915.1| hypothetical protein bcere0012_26840 [Bacillus cereus BDRD-ST24] gi|296503473|ref|YP_003665173.1| hypothetical protein BMB171_C2641 [Bacillus thuringiensis BMB171] gi|228637984|gb|EEK94430.1| hypothetical protein bcere0012_26840 [Bacillus cereus BDRD-ST24] gi|296324525|gb|ADH07453.1| hypothetical protein BMB171_C2641 [Bacillus thuringiensis BMB171] Length = 282 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|154502792|ref|ZP_02039852.1| hypothetical protein RUMGNA_00606 [Ruminococcus gnavus ATCC 29149] gi|153796675|gb|EDN79095.1| hypothetical protein RUMGNA_00606 [Ruminococcus gnavus ATCC 29149] Length = 543 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 M + I FEG + AGK I L + L + ++V +E Sbjct: 69 MGLPIMIVFEGFDAAGKGMQIGKLIQSLDPRGFEVFTVKEET 110 >gi|116582905|gb|ABK00075.1| regulatory protein [Neisseria gonorrhoeae] Length = 140 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 106 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 107 TAGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|89096302|ref|ZP_01169195.1| probable permease protein of ABC transporter system [Bacillus sp. NRRL B-14911] gi|89089156|gb|EAR68264.1| probable permease protein of ABC transporter system [Bacillus sp. NRRL B-14911] Length = 609 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 SG ++ G GAGKTT I+LL RF + ++ + P + E R + Sbjct: 394 KSGQKVAIVGPTGAGKTTIINLLMRFYEVSGGEILIDGVPTKELSREKLRSL 445 >gi|58698484|ref|ZP_00373390.1| guanylate kinase [Wolbachia endosymbiont of Drosophila ananassae] gi|58534999|gb|EAL59092.1| guanylate kinase [Wolbachia endosymbiont of Drosophila ananassae] Length = 205 Score = 38.9 bits (90), Expect = 0.49, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 61/209 (29%), Gaps = 34/209 (16%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ + GAGKTT + L V TR+P + E Sbjct: 11 GVLLVLSSPSGAGKTTISAKLLERSTNLVRSVSMTTRKPRPGEINGKDYFFVTEEKFHEL 70 Query: 63 GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + +A + N I L G +L S +QG + + Sbjct: 71 CKAGQMLEYAKVFENFYGIPRNFIEQNLSNGISVLL------SIDWQGAFHLFKLMRKKV 124 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + IL P ++ ++ R R S ER + + + Sbjct: 125 VS-----------VFIL--PP--SMEELRLRLQKRNSDDASEIER-------RLAEAQKE 162 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 I++ I++ I +I+ Sbjct: 163 ISKRDKYDYVIIN--DDIDKSVEEISSIL 189 >gi|219118618|ref|XP_002180078.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217408335|gb|EEC48269.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 179 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 74/199 (37%), Gaps = 29/199 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK LL + L+++ + VH++ G +E A+ L V + E +V Sbjct: 5 GGPGSGK----GLLSKRLEKECHVVHLSS--GELLRSEVAQDTALGRQVRDIMDRGE-LV 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 +A + ++ +R GK +L D F S L++ ++ P Sbjct: 58 SSAIMVALMKKRMRDH--PGKRVLLDGFPRS---------------LENAHDLVTLCGRP 100 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE-KRRQIFLD----IARNQP 185 + + L+ I L+R+ R + + + + F + R Q Sbjct: 101 ELALHLECDDTILLERILQRGADSAPEERRADDNFQTALQRLRTYHAFHNSTIHWLREQH 160 Query: 186 DRCHIVDSAHSFQSVATNI 204 +D + + +SV + Sbjct: 161 VPVVNLDCSGTAESVWQQL 179 >gi|220936146|ref|YP_002515045.1| signal recognition particle-docking protein FtsY [Thioalkalivibrio sp. HL-EbGR7] gi|219997456|gb|ACL74058.1| signal recognition particle-docking protein FtsY [Thioalkalivibrio sp. HL-EbGR7] Length = 329 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L + LQ + V + G T A A + + + + Sbjct: 131 GINGAGKTTTIGKLAKRLQNEGRSVMLAA--GDTFRAAAVEQLQVWGERNRIPVITQGK- 187 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 188 -GADSASVIYDAVQAAKARGVDVLIAD 213 >gi|124376186|gb|AAI32822.1| CMPK2 protein [Homo sapiens] gi|219519051|gb|AAI44203.1| CMPK2 protein [Homo sapiens] Length = 366 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 6/45 (13%) Query: 1 MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43 + G F ++ EG++ GKTT + L+ V + P Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA----VLLKSPPSC 287 >gi|330970953|gb|EGH71019.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. aceris str. M302273PT] Length = 499 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 300 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 355 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 356 TGADSASVIFDAVQAAKARGIDVLIAD 382 >gi|329118182|ref|ZP_08246892.1| cell division protein FtsY [Neisseria bacilliformis ATCC BAA-1200] gi|327465603|gb|EGF11878.1| cell division protein FtsY [Neisseria bacilliformis ATCC BAA-1200] Length = 470 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37 GI GAGKTT I L ++ Q++ V + Sbjct: 276 GINGAGKTTSIGKLAKYFQQQGKTVIL 302 >gi|332160700|ref|YP_004297277.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664930|gb|ADZ41574.1| shikimate kinase II [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862479|emb|CBX72636.1| shikimate kinase 2 [Yersinia enterocolitica W22703] Length = 174 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 67/213 (31%), Gaps = 46/213 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M +F+ G GAGKTT L + L+ + D ++ + AE ++ G Sbjct: 1 MTQTIFMV--GARGAGKTTIGKALAQALEYRFIDTDLFMQQTLQSSVAE----IVAREGW 54 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D F + V G +L + ++ Q Sbjct: 55 DGFRLRESMAL------QTVTAPKTVVATGGGAVLS--HDNRTFMRQHG----------- 95 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIF 177 I L ++ +R+ + L + + + R ++ Sbjct: 96 ------------VVIYLRASANVLAERLAEDPEDAQRPSLTGKPIVEEMLDVLASREPLY 143 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++A H++D+ + V IL+I+ + Sbjct: 144 QEVAH------HVLDATQPPEEVVEQILHILAD 170 >gi|254294008|ref|YP_003060031.1| ABC transporter [Hirschia baltica ATCC 49814] gi|254042539|gb|ACT59334.1| ABC transporter related [Hirschia baltica ATCC 49814] Length = 744 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 23/54 (42%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 + +G FI+ G G+GK+T + +L V+ P T + R + Sbjct: 510 IQAGEFIALTGPSGSGKSTLLRVLMGLYPSTGGQVYFDGLPLSTWGPSSIRAQI 563 >gi|222149181|ref|YP_002550138.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium vitis S4] gi|221736166|gb|ACM37129.1| ABC transporter nucleotide binding/ATPase protein [Agrobacterium vitis S4] Length = 352 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 12/24 (50%), Positives = 15/24 (62%) Query: 2 NSGLFISFEGIEGAGKTTHISLLK 25 N G FISF G G GKTT + ++ Sbjct: 27 NKGEFISFLGPSGCGKTTVLRMVA 50 >gi|3334298|sp|O30391|FTSY_NEIMC RecName: Full=Cell division protein ftsY homolog gi|2580590|gb|AAB97510.1| putative transcriptional regulator [Neisseria meningitidis] Length = 421 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|322698616|gb|EFY90385.1| guanylate kinase [Metarhizium acridum CQMa 102] Length = 194 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 35/174 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVD 60 I G G GK T L L ++ D H TR P A H + + Sbjct: 11 IVISGPSGVGKGT----LYNRLFAQHPDTFCLSVSHTTRSPRPGEANGVDYHYVSMGDFE 66 Query: 61 EFGAE---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + A+ E F R + I +GK++L D + + Sbjct: 67 DLIAKDGFVEHAQFGGNRYGTSKMTIEEQTKKGKVVLLD---------------IEMEGV 111 Query: 118 DSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 +++ S+ I + P +I R++ R + E++ + + ++ + Sbjct: 112 KQIKQSSIAARY----IFI-APPSLEILEARLRGRGTENEASIQNRLNQANIEL 160 >gi|302187229|ref|ZP_07263902.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. syringae 642] Length = 502 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 303 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 358 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 359 TGADSASVIFDAVQAAKARGIDVLIAD 385 >gi|282851457|ref|ZP_06260822.1| putative excinuclease ABC subunit A [Lactobacillus gasseri 224-1] gi|282557425|gb|EFB63022.1| putative excinuclease ABC subunit A [Lactobacillus gasseri 224-1] Length = 503 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T ++L LKR L +K Sbjct: 179 GKFIVVTGVSGSGKSTLVNLILKRALAQK 207 >gi|269115117|ref|YP_003302880.1| Excinuclease ABC subunit A [Mycoplasma hominis] gi|268322742|emb|CAX37477.1| Excinuclease ABC subunit A [Mycoplasma hominis ATCC 23114] Length = 942 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 4 GLFISFEGIEGAGKTTHIS-----LLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G FI+ G+ G+GK+T I+ L ++L + YD+ + G + + Sbjct: 636 GKFIAITGVSGSGKSTLINDELVGSLNKYLLDQYYDIQRDNKLIGQTNIDKLIQI 690 >gi|257482993|ref|ZP_05637034.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331011768|gb|EGH91824.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 496 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 297 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 352 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 353 TGADSASVIFDAVQAAKARGIDVLIAD 379 >gi|261364318|ref|ZP_05977201.1| signal recognition particle-docking protein FtsY [Neisseria mucosa ATCC 25996] gi|288567574|gb|EFC89134.1| signal recognition particle-docking protein FtsY [Neisseria mucosa ATCC 25996] Length = 483 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 23/156 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 290 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 344 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +++ Sbjct: 345 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLKK 395 Query: 128 VMPD----CTIILDLPVDIGLKRVQNRYSLRESACL 159 MPD ++LD +IG V + E+ L Sbjct: 396 AMPDAPHEIIVVLD--ANIGQNAVNQVKAFDEALGL 429 >gi|196250272|ref|ZP_03148965.1| Adenylyl-sulfate kinase [Geobacillus sp. G11MC16] gi|196210161|gb|EDY04927.1| Adenylyl-sulfate kinase [Geobacillus sp. G11MC16] Length = 203 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + R L ++ +L G + Sbjct: 30 FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA R +++ V + + G+ +L S +A E + ++ + I Sbjct: 73 GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126 Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 I ++ P++ KR R +RE +D Sbjct: 127 --------IYVNCPLEECEKRDPKGLYKKARRGEIREFTGID 160 >gi|119482584|ref|XP_001261320.1| uridylate kinase Ura6 [Neosartorya fischeri NRRL 181] gi|119409475|gb|EAW19423.1| uridylate kinase Ura6 [Neosartorya fischeri NRRL 181] Length = 235 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 65/213 (30%), Gaps = 36/213 (16%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNY-DVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G G+GK T + L R L + RE G+ + R + + Sbjct: 40 GGPGSGKGTQSANLVRDYGFIHLSAGDLLRAEQVRE--GSQYGDLIRTYIKEGKIVPMEI 97 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A A + K RFL G Sbjct: 98 TVALLSNAMAEALAAGAGATADGGKKKA----RFLID-----GFPRKLDQAV------FF 142 Query: 125 VQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 V P + T+ LD P ++ KR+ R E++ D + + KR ++F++ Sbjct: 143 EDTVCPSEMTLFLDCPEEVMEKRLLKRG---ETSGRDDDNAESI---RKRFRVFVETSMP 196 Query: 180 --IARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 A + + V + + V I + + Sbjct: 197 VVRAFEEQHKVLSVSATGTVDEVYARIREGLEK 229 >gi|71903063|ref|YP_279866.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS6180] gi|71802158|gb|AAX71511.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS6180] Length = 226 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52 + I G +GK+T + ++ ++ Y V + G EA R Sbjct: 27 KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 82 Query: 53 --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106 +L + G + +E + + +I+ L + + Sbjct: 83 NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 130 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + + + + L E+ Q+ D ++ + L+R+ R L + + Sbjct: 131 AQSQAIFFMDIPILMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 188 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L I +P ++D++ ++ + + + L R Sbjct: 189 -----------LPIEEKKPYASLVIDNSGDIAALIKQVQSALLSLANPR 226 >gi|6647539|sp|P73302|KAD1_SYNY3 RecName: Full=Adenylate kinase 1; Short=AK 1; AltName: Full=ATP-AMP transphosphorylase 1 Length = 185 Score = 38.9 bits (90), Expect = 0.50, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 72/224 (32%), Gaps = 55/224 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55 M GL F G G+GK T L L T + R + L Sbjct: 1 MAKGLI--FLGAPGSGKGTQAVGLAETL---GIPHIST--------GDMLRQAIADGTEL 47 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDS 111 + + E + + +I L + +L D F R+ Sbjct: 48 GNQAKGYMDKGELVP-----DQLILGLIEERLGHKDAKAGWIL-DGF---------PRNV 92 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR--VQNRYSLRESACLDYF----ERK 165 +Q +FLD L + I L +P ++ ++R + R E+ + E+ Sbjct: 93 NQAIFLDEL--LVNIGHRTHWVINLKVPDEVIVERLLARGRADDNETTIRNRLLVYTEQT 150 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 ++ + + + +D +++ATN+ +V Sbjct: 151 APLM-----AYYQEQGKLYS-----LDGNQPVEAIATNLEKLVK 184 >gi|330985908|gb|EGH84011.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. lachrymans str. M301315] Length = 502 Score = 38.9 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 303 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 358 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 359 TGADSASVIFDAVQAAKARGIDVLIAD 385 >gi|289648495|ref|ZP_06479838.1| cell division transporter substrate-binding protein FtsY [Pseudomonas syringae pv. aesculi str. 2250] Length = 494 Score = 38.9 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 295 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 350 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 351 TGADSASVIFDAVQAAKARGIDVLIAD 377 >gi|289624656|ref|ZP_06457610.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|298485261|ref|ZP_07003354.1| signal recognition particle docking protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298160249|gb|EFI01277.1| signal recognition particle docking protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330871132|gb|EGH05841.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 496 Score = 38.9 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 297 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 352 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 353 TGADSASVIFDAVQAAKARGIDVLIAD 379 >gi|226365994|ref|YP_002783777.1| signal recognition particle protein [Rhodococcus opacus B4] gi|226244484|dbj|BAH54832.1| signal recognition particle protein [Rhodococcus opacus B4] Length = 535 Score = 38.9 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 53/157 (33%), Gaps = 22/157 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60 G++G+GKTT L ++L+ + + + P A ++ G Sbjct: 114 GLQGSGKTTLAGKLAKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTS 173 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G + E + AA ++ + A + +++ D R + Sbjct: 174 IGGGDNELGITAADPVEVARAGVEEARNKQFDVVIVD---------TAGRLGIDADLMAQ 224 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 I V PD TI + L IG V + RE Sbjct: 225 AAGI-RDAVNPDETIFV-LDAMIGQDAVSTAEAFREG 259 >gi|269968645|ref|ZP_06182642.1| signal recognition particle-docking protein FtsY [Vibrio alginolyticus 40B] gi|269826732|gb|EEZ81069.1| signal recognition particle-docking protein FtsY [Vibrio alginolyticus 40B] Length = 408 Score = 38.9 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 211 GVNGVGKTTTIGKLAKQFQTQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 266 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 267 TGADSASVIYDAIEAAKARGVDVVIAD 293 >gi|288931995|ref|YP_003436055.1| GTP-binding signal recognition particle SRP54 G- domain protein [Ferroglobus placidus DSM 10642] gi|288894243|gb|ADC65780.1| GTP-binding signal recognition particle SRP54 G- domain protein [Ferroglobus placidus DSM 10642] Length = 431 Score = 38.9 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 62/153 (40%), Gaps = 18/153 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 G++G+GKTT + + ++ + K V PAA E + + G+ FG + E Sbjct: 99 GLQGSGKTTTAAKIAKYFKDKGMKAAVIAGDTHRPAAYEQLKQLAEQAGLGFFGKKEE-- 156 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 + V+ + AL + +++ D R + + ++ ++ I+ + Sbjct: 157 ---KDAVKIVKEGLE-ALKDYDVIVID---------TAGRHALEEELIEEMKRIA-EVSK 202 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 PD ++ L IG + + E+ +D Sbjct: 203 PDYKFLV-LDASIGQLASKQAEAFNEAVGIDAI 234 >gi|119897057|ref|YP_932270.1| signal recognition particle-docing protein FtsY [Azoarcus sp. BH72] gi|119669470|emb|CAL93383.1| probable signal recognition particle-docing protein FtsY [Azoarcus sp. BH72] Length = 377 Score = 38.9 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + I G+ G+GKTT I L ++ Q + V + G T A A ++ + Sbjct: 161 HKPYIIMIAGVNGSGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLMTWGERNN 218 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCD 96 A+ + + I A G I+L D Sbjct: 219 VTVIAQD---GGDAAAVIFDAINAARARGIDIVLAD 251 >gi|220909488|ref|YP_002484799.1| Guanylate kinase [Cyanothece sp. PCC 7425] gi|219866099|gb|ACL46438.1| Guanylate kinase [Cyanothece sp. PCC 7425] Length = 233 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 22/171 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G + G G GK T + L + + + TR P + + ++ Sbjct: 21 RGQLVVITGPSGVGKGTLLRSLLQHHPELFFSISATTRAPRPGEVQGQHYYFVSHEKFEQ 80 Query: 62 FGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 AE E + FA + + +GK ++ + Sbjct: 81 MLAEGELLESAQFAGNSYGTPRQPVENQIRQGKQVIL---------------EIELEGAR 125 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++ Q + IL +++ +R++ R E+A R I Sbjct: 126 QVRHSYPQALQ---VFILPPSLEVLEERIRGRGQDSEAAIAKRLARAQEEI 173 >gi|161869063|ref|YP_001598229.1| signal recognition particle protein [Neisseria meningitidis 053442] gi|161594616|gb|ABX72276.1| signal recognition particle protein [Neisseria meningitidis 053442] Length = 421 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|41946992|gb|AAH66055.1| Papss1 protein [Mus musculus] gi|74139519|dbj|BAE40897.1| unnamed protein product [Mus musculus] gi|74141810|dbj|BAE40977.1| unnamed protein product [Mus musculus] gi|148680250|gb|EDL12197.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1, isoform CRA_a [Mus musculus] Length = 603 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 38 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 83 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 84 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 131 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 132 FFEVFVDAPLHVCEQR 147 >gi|27573157|gb|AAO19978.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|36939131|gb|AAQ86944.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|36939151|gb|AAQ86948.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|37623910|gb|AAQ95587.1| regulatory protein [Neisseria gonorrhoeae] Length = 311 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|71736424|ref|YP_276881.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556977|gb|AAZ36188.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. phaseolicola 1448A] Length = 500 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 301 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 356 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 357 TGADSASVIFDAVQAAKARGIDVLIAD 383 >gi|87308020|ref|ZP_01090162.1| cell division protein FtsY [Blastopirellula marina DSM 3645] gi|87289102|gb|EAQ80994.1| cell division protein FtsY [Blastopirellula marina DSM 3645] Length = 328 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 10/27 (37%), Positives = 17/27 (62%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37 G+ G+GKTT I+ L +L+ + V + Sbjct: 131 GVNGSGKTTSIAKLASYLKSQGKSVVL 157 >gi|158318908|ref|YP_001511416.1| hypothetical protein Franean1_7191 [Frankia sp. EAN1pec] gi|158114313|gb|ABW16510.1| conserved hypothetical protein [Frankia sp. EAN1pec] Length = 334 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 I+F G G+GKTT +LL R L + + V Sbjct: 3 IAFVGKGGSGKTTLSALLCRHLAARGHPVL 32 >gi|94985946|ref|YP_605310.1| adenylate kinases [Deinococcus geothermalis DSM 11300] gi|166980316|sp|Q1IX93|KAD_DEIGD RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|94556227|gb|ABF46141.1| adenylate kinase [Deinococcus geothermalis DSM 11300] Length = 197 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 67/230 (29%), Gaps = 58/230 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + + F G GAGK T L R + + R Sbjct: 4 SKNKVVIFLGPPGAGKGTQAERLARE-----------QNLAKISTGDILRD--------- 43 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKIL--------LCDRF--------LDSSYAY 105 AR + ++P L G+++ + DR + + Sbjct: 44 ----------HVARGTALGQRVKPILDAGQLVPDDILIALIRDRLAGMEPVRVIFDGFPR 93 Query: 106 QGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + + + L+ L +L++P + ++R+ R Sbjct: 94 TCAQAEALDMLLEELGAPVSAVP------LLEVPDETLIERIVERGRQAALRGEPVRSDD 147 Query: 166 DVMIHEKRRQIFLD----IARNQPDRCHI--VDSAHSFQSVATNILNIVW 209 + +R+Q++ + + R H+ V+ + V IL +V Sbjct: 148 TEEVARRRQQVYREQTQPLIDYYAARGHLQHVNGVGTPDEVYNRILQVVR 197 >gi|332179475|gb|AEE15164.1| Fe(3+)-transporting ATPase [Thermodesulfobium narugense DSM 14796] Length = 298 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 18/29 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 ++ G ++ G +G+GKTT I ++ L+ Sbjct: 24 LDKGKILTILGPDGSGKTTLIKIIIGLLR 52 >gi|329764770|ref|ZP_08256364.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum limnia SFB1] gi|329138734|gb|EGG42976.1| GTP-binding signal recognition particle [Candidatus Nitrosoarchaeum limnia SFB1] Length = 441 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 18/25 (72%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV 35 GI+G+GKTT + L +FL ++ Y V Sbjct: 106 GIQGSGKTTVTAKLAKFLTKQGYSV 130 >gi|332161597|ref|YP_004298174.1| arginine/ornithine transport system ATPase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665827|gb|ADZ42471.1| arginine/ornithine transport system ATPase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330861519|emb|CBX71730.1| laO/AO transport system kinase [Yersinia enterocolitica W22703] Length = 331 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64 G GAGK+T + L L + + V + +P GG+ + R + LS F Sbjct: 61 GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 120 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94 + +I G I++ Sbjct: 121 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 151 >gi|222529174|ref|YP_002573056.1| ABC transporter-like protein [Caldicellulosiruptor bescii DSM 6725] gi|222456021|gb|ACM60283.1| ABC transporter related [Caldicellulosiruptor bescii DSM 6725] Length = 279 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 12/70 (17%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI G G GK+T ++++ L++ P R +LS G D Sbjct: 30 QKGKFICILGPSGCGKSTLLNIIAG-LEK----------PSEGKVFLNGRE-VLSPGPDR 77 Query: 62 FGAEAEAIVF 71 E+ +F Sbjct: 78 VVMFQESALF 87 >gi|254473567|ref|ZP_05086963.1| conserved hypothetical protein [Pseudovibrio sp. JE062] gi|211957279|gb|EEA92483.1| conserved hypothetical protein [Pseudovibrio sp. JE062] Length = 522 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 34/198 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS-CGVDEFGAEAEAI 69 G+ G GKTT L L R VH+ + R +L D+ + Sbjct: 351 GLSGTGKTTLAQGLAPKLGRMPGAVHL--------RTDVIRKEMLEIGEADKASKDTYTP 402 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 F+A + L G ++ D + DS++ ++ + Sbjct: 403 EFSAKVYAELLRRAEMVLAAGHSVIID------------GVYGKPTERDSVERLAKKTNA 450 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189 I L+ V+ + RV R+ A + +Q + D+ Sbjct: 451 EFIGIWLEADVETLINRVDARHGDASDAD---------AAVVRLQQTY-DLGEIH---WA 497 Query: 190 IVDSAHSFQSVATNILNI 207 ++DS+ S + V N+ Sbjct: 498 MLDSSKSKEDVLEQACNV 515 >gi|162149013|ref|YP_001603474.1| putative tetraacyldisaccharide 4'-kinase [Gluconacetobacter diazotrophicus PAl 5] gi|209545237|ref|YP_002277466.1| tetraacyldisaccharide 4'-kinase [Gluconacetobacter diazotrophicus PAl 5] gi|226740811|sp|A9H0Y0|LPXK_GLUDA RecName: Full=Tetraacyldisaccharide 4'-kinase; AltName: Full=Lipid A 4'-kinase gi|161787590|emb|CAP57186.1| putative tetraacyldisaccharide 4'-kinase [Gluconacetobacter diazotrophicus PAl 5] gi|209532914|gb|ACI52851.1| tetraacyldisaccharide 4'-kinase [Gluconacetobacter diazotrophicus PAl 5] Length = 327 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 4/60 (6%) Query: 14 GAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 GAGKTT L L + VH +TR GG + EA++ A Sbjct: 55 GAGKTTVALDLAARLVARGRHVHILTRGYGGRARGPLLVDPARHSAAEVGD---EALLLA 111 >gi|147898604|ref|NP_001088321.1| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa [Xenopus laevis] gi|54038695|gb|AAH84366.1| Ndufa10a protein [Xenopus laevis] Length = 351 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 78/244 (31%), Gaps = 35/244 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY----DVHVTREPGGTPAAEA-------ARHV 53 I+ +G +GK L L + + + ++ + G + Sbjct: 54 KIITVDGNLASGKGQIAKKLADRLGMRYFPEADEHYLDKTTGDGSILPSKFSGNCSLDKF 113 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERD 110 + + + RL + + L G+ + +R S + + + Sbjct: 114 YDDPKCPDGNSYRLQSWMYSVRLMQYSDALEHLLSTGQGAVLERSPFSDFVFLEAMYKNG 173 Query: 111 SSQHLFLDSLQEI----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERK 165 + +D EI + + P I +D+P K++ R E L Y + Sbjct: 174 YIRKQCIDHYNEIKGNSIDEFLPPHLVIYVDVPAAEVHKKILERGHTSEKKVALPYLQSI 233 Query: 166 DVMIHEKRRQIFLDIARNQPDRCHIV----DSAHSFQSVATNILNIVWELVQKRVSPLSS 221 + ++ FL + I+ + A + V +I E ++ SP + Sbjct: 234 ENTY----KESFLPQISENSE---ILKYTGNEAQDVEKVVEDI-----EYLKFDKSPWTE 281 Query: 222 KKDI 225 + D+ Sbjct: 282 QNDV 285 >gi|66047975|ref|YP_237816.1| cell division transporter substrate-binding protein FtsY [Pseudomonas syringae pv. syringae B728a] gi|63258682|gb|AAY39778.1| Cell division transporter substrate-binding protein FtsY [Pseudomonas syringae pv. syringae B728a] Length = 505 Score = 38.9 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 306 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 361 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 362 TGADSASVIFDAVQAAKARGIDVLIAD 388 >gi|308061448|gb|ADO03336.1| shikimate kinase [Helicobacter pylori Cuz20] Length = 162 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ L L+ +V T + R + G D F +F Sbjct: 11 GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 +D ++ + P ++ + D+L+ + T Sbjct: 62 NLIDELKTLKNP------HVIST--------------GGGIVMHDNLKGLGT-------T 94 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 L + + +KR+ + + D + K++ EKR+ ++ A I+D+ Sbjct: 95 FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146 Query: 194 AHSFQSVATNILNIV 208 + +L + Sbjct: 147 RGGLNNSLKQVLQFI 161 >gi|229070469|ref|ZP_04203712.1| hypothetical protein bcere0025_26550 [Bacillus cereus F65185] gi|229080176|ref|ZP_04212703.1| hypothetical protein bcere0023_28240 [Bacillus cereus Rock4-2] gi|228703071|gb|EEL55530.1| hypothetical protein bcere0023_28240 [Bacillus cereus Rock4-2] gi|228712675|gb|EEL64607.1| hypothetical protein bcere0025_26550 [Bacillus cereus F65185] Length = 282 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|229110392|ref|ZP_04239964.1| hypothetical protein bcere0018_26450 [Bacillus cereus Rock1-15] gi|228673132|gb|EEL28404.1| hypothetical protein bcere0018_26450 [Bacillus cereus Rock1-15] Length = 282 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|229185153|ref|ZP_04312340.1| hypothetical protein bcere0004_27080 [Bacillus cereus BGSC 6E1] gi|228598323|gb|EEK55956.1| hypothetical protein bcere0004_27080 [Bacillus cereus BGSC 6E1] Length = 282 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|218296954|ref|ZP_03497640.1| ABC transporter related [Thermus aquaticus Y51MC23] gi|218242657|gb|EED09193.1| ABC transporter related [Thermus aquaticus Y51MC23] Length = 261 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 2/79 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDE 61 G F++ G G+GKTT + +L L +V + +P +P A A R +LS Sbjct: 27 GEFLAVLGPNGSGKTTLLRILAGELSPSEGEVRLWGKPLTAYSPKALARRRAVLSQNRQI 86 Query: 62 FGAEAEAIVFAAARLDHVE 80 V RL H+ Sbjct: 87 AFPLTAYEVAFLGRLPHIR 105 >gi|169334024|ref|ZP_02861217.1| hypothetical protein ANASTE_00417 [Anaerofustis stercorihominis DSM 17244] gi|169258741|gb|EDS72707.1| hypothetical protein ANASTE_00417 [Anaerofustis stercorihominis DSM 17244] Length = 305 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 24/52 (46%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G SF G GAGK+T I +L L + + DV + G E +H+ Sbjct: 29 KKGQLFSFLGPNGAGKSTTIKILCTLLDKNDGDVFIDGFKLGNDDNEIRKHI 80 >gi|256851298|ref|ZP_05556687.1| signal recognition particle-docking protein FtsY [Lactobacillus jensenii 27-2-CHN] gi|260660722|ref|ZP_05861637.1| signal recognition particle-docking protein FtsY [Lactobacillus jensenii 115-3-CHN] gi|282933257|ref|ZP_06338644.1| FtsY-like protein [Lactobacillus jensenii 208-1] gi|297206167|ref|ZP_06923562.1| cell division protein FtsY [Lactobacillus jensenii JV-V16] gi|256616360|gb|EEU21548.1| signal recognition particle-docking protein FtsY [Lactobacillus jensenii 27-2-CHN] gi|260548444|gb|EEX24419.1| signal recognition particle-docking protein FtsY [Lactobacillus jensenii 115-3-CHN] gi|281302761|gb|EFA94976.1| FtsY-like protein [Lactobacillus jensenii 208-1] gi|297149293|gb|EFH29591.1| cell division protein FtsY [Lactobacillus jensenii JV-V16] Length = 434 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 13/91 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + + + V + T A A + E+G E V Sbjct: 237 GVNGAGKTTTIGKLAQRFKNQGKKVVLVA--ADTFRAGAVEQL------KEWGRRTETEV 288 Query: 71 FA----AARLDHVENVIRPALMEG-KILLCD 96 A V + ++ L E +L D Sbjct: 289 VTGPVQADPASVVYDGVKHGLEEKADYVLVD 319 >gi|210615661|ref|ZP_03290707.1| hypothetical protein CLONEX_02925 [Clostridium nexile DSM 1787] gi|210150204|gb|EEA81213.1| hypothetical protein CLONEX_02925 [Clostridium nexile DSM 1787] Length = 232 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 7/87 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G GAGK+T + + L Y T G A A + G D+ A Sbjct: 19 IAIDGPAGAGKSTIAKRVAKEL---GYVYVDT---GAMYRALAIYFLNQGLGTDDTEKIA 72 Query: 67 EAIVFAAARLDHVENVIRPALMEGKIL 93 EA A L EN ++ + G+ + Sbjct: 73 EACKHAEVTLQ-YENGVQQVYLNGENV 98 >gi|75908277|ref|YP_322573.1| hypothetical protein Ava_2056 [Anabaena variabilis ATCC 29413] gi|75702002|gb|ABA21678.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413] Length = 510 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 29/167 (17%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60 G I G+ G+GK+T L R L R+ GG E L + Sbjct: 340 KQGKLILMSGLSGSGKSTTAKYLARQLDAIQIRSDAVRKHLGGISLWERGGDDLYTP--- 396 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLD 118 E + A + + +G ++ D D Q ++ HL L Sbjct: 397 EMTQKTYARLLNLGTI---------LANQGYTVILDAKYDKQNLRQEAIAQAEKHHLPLQ 447 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 + + P+++ +R+ R A +D + Sbjct: 448 IIHCTA--------------PIEVIQERLIKRTGDIADATVDLLSSQ 480 >gi|325129203|gb|EGC52048.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis N1568] Length = 421 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|308388268|gb|ADO30588.1| probable signal recognition particle protein [Neisseria meningitidis alpha710] gi|319409567|emb|CBY89858.1| cell division protein FtsY [Neisseria meningitidis WUE 2594] gi|325133204|gb|EGC55874.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis M6190] Length = 421 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|302386600|ref|YP_003822422.1| ABC transporter [Clostridium saccharolyticum WM1] gi|302197228|gb|ADL04799.1| ABC transporter related protein [Clostridium saccharolyticum WM1] Length = 581 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 14/103 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRF-------LQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 I+ G G GK+T I+LL RF +Q DV H+TR+ T + L G Sbjct: 372 IAIVGPTGCGKSTVINLLMRFYDVTCGSIQVDGTDVRHMTRQSLRTNYGMVLQETWLKSG 431 Query: 59 VDEF-----GAEA-EAIVFAAARLDHVENVIRPALMEGKILLC 95 EA E + AA+ H IR ++ Sbjct: 432 TIRENIAYGNPEASEEEIILAAKEAHAHGFIRRMPQGYDTVIS 474 >gi|254423746|ref|ZP_05037464.1| Phosphoribulokinase / Uridine kinase family [Synechococcus sp. PCC 7335] gi|196191235|gb|EDX86199.1| Phosphoribulokinase / Uridine kinase family [Synechococcus sp. PCC 7335] Length = 335 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 54/195 (27%), Gaps = 38/195 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GK+T + L + V R V + Sbjct: 15 GDSGCGKSTFLRRLADLFGEEFMTVI-----CLDDYHSLDRKQRKEKKVTALNPK----- 64 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 A D + I+ AL EG + D + ++ + I ++ + P Sbjct: 65 --ANNFDLMYEQIK-ALKEGNTI------DKPIYNHETGELDPPEKVEPNKIIVIEGLHP 115 Query: 131 ----------DCTIILDLPVDI----GLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 D ++ LD+ ++ ++R L + + Sbjct: 116 LYDERVRNLLDFSVYLDISDEVKINWKIQRDMAERGHTYEDVLAAINARKPDF-----EA 170 Query: 177 FLDIARNQPDRCHIV 191 ++D+ + D + Sbjct: 171 YIDVQKQYADVVIQI 185 >gi|157964785|ref|YP_001499609.1| adenylate kinase [Rickettsia massiliae MTU5] gi|157844561|gb|ABV85062.1| Adenylate kinase [Rickettsia massiliae MTU5] Length = 213 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 81/234 (34%), Gaps = 52/234 (22%) Query: 5 LFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 + I F G GAGK T + + + + + R ++ + Sbjct: 1 MVIVIFLGPPGAGKGTQGKKIAKKI-----------DLPHIAIGDIFRTIIKTS-----T 44 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 +EAE I + + N I +++ +L + + Y G + + + Sbjct: 45 SEAELINNYVKQGKLIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQT--KFFEAF 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DY 161 +++ I LD+ ++ +KR+ RYS + + DY Sbjct: 101 IKEKIK---IIYLDVSDELLIKRILGRYSCKNCGKIYNSYFLQPKTDNVCDVCGSSTFDY 157 Query: 162 FERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + + +KR +++ + +IV+ + + Q + +I I+ Sbjct: 158 RKDDNEEVIKKRIEVYKTETYPLIDYYKNSGNFYIVNGSKNEQEIEIDIQKILK 211 >gi|118478276|ref|YP_895427.1| hypothetical protein BALH_2637 [Bacillus thuringiensis str. Al Hakam] gi|118417501|gb|ABK85920.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 282 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|297581816|ref|ZP_06943737.1| signal recognition particle-docking protein FtsY [Vibrio cholerae RC385] gi|297533910|gb|EFH72750.1| signal recognition particle-docking protein FtsY [Vibrio cholerae RC385] Length = 397 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 200 GVNGVGKTTTIGKLAKQFQAQGEKVMLAA--GDTFRAAAVEQLQVWGERNQVPVIAQH-- 255 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 256 TGADSASVIYDAIEAAKARGIDVVIAD 282 >gi|15675985|ref|NP_273111.1| signal recognition particle protein [Neisseria meningitidis MC58] gi|9910689|sp|P57011|FTSY_NEIMB RecName: Full=Cell division protein ftsY homolog gi|7225266|gb|AAF40516.1| signal recognition particle protein [Neisseria meningitidis MC58] gi|316983616|gb|EFV62598.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis H44/76] gi|325199276|gb|ADY94731.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis H44/76] Length = 421 Score = 38.9 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|320528387|ref|ZP_08029549.1| signal recognition particle-docking protein FtsY [Solobacterium moorei F0204] gi|320131301|gb|EFW23869.1| signal recognition particle-docking protein FtsY [Solobacterium moorei F0204] Length = 323 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 15/30 (50%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 EG+ G+GKTT + L R + V T Sbjct: 121 LEGVNGSGKTTTSAKLARMFLDQGKSVAFT 150 >gi|325111145|ref|YP_004272213.1| adenylylsulfate kinase [Planctomyces brasiliensis DSM 5305] gi|324971413|gb|ADY62191.1| adenylylsulfate kinase [Planctomyces brasiliensis DSM 5305] Length = 203 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 60/214 (28%), Gaps = 62/214 (28%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T + + L +K +L G Sbjct: 34 FTGLSGAGKSTVANTVDHLLHQKGIHTF-----------------VLDGDNVRMGLNKNL 76 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R +++ V + G +L A+ + + L++ Sbjct: 77 GFSAEDRAENIRRIGEVAKLFANSGIFVLT--------AFISPYRADRDQVRSILED--- 125 Query: 126 QEVMPDCTIILDLPVDIGLKR------VQNRYSLRES--ACLDYFERKDVMIHEKRRQIF 177 E +++D ++ R + R + D +E Sbjct: 126 GEF---IEVLVDASLETCEARDPKGLYKKARAGEIKGFTGIDDPYE-------------- 168 Query: 178 LDIARNQPDRCHIVDS-AHSFQSVATNILNIVWE 210 A P+ +D S +A ++ + + Sbjct: 169 ---APENPE--ITLDGDTKSIDELAAEVVQYLSD 197 >gi|159039699|ref|YP_001538952.1| adenylylsulfate kinase [Salinispora arenicola CNS-205] gi|157918534|gb|ABV99961.1| adenylylsulfate kinase [Salinispora arenicola CNS-205] Length = 508 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 16/36 (44%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 + GL I G+ G+GK+T L L+ + Sbjct: 324 HRGLVIFLTGLSGSGKSTIARGLADALREQGERTIT 359 >gi|36939139|gb|AAQ86946.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 311 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|36939135|gb|AAQ86945.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|36939145|gb|AAQ86947.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 311 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|85373608|ref|YP_457670.1| signal recognition particle GTPase [Erythrobacter litoralis HTCC2594] gi|84786691|gb|ABC62873.1| signal recognition particle GTPase [Erythrobacter litoralis HTCC2594] Length = 304 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 32/142 (22%), Positives = 52/142 (36%), Gaps = 36/142 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT I+ L +L ++Y+V +L+ G A E + Sbjct: 108 GVNGSGKTTTIAKLAHWLVEEDYEV------------------MLAAGDTFRAAAIEQLA 149 Query: 71 FAAARLDHVENVIRPALMEGK---ILL------CDRFLDSSYAYQGERDSSQHLFLDSLQ 121 A R V I G I+ DR D+ R ++ +D L Sbjct: 150 TWADR---VGVPIVKGPQGGDPASIVFDGVKAGTDRGTDALVVDTAGRLQNKRELMDELA 206 Query: 122 EI--SVQEVMP----DCTIILD 137 +I + + P D ++LD Sbjct: 207 KIRKVLGRLNPEAPHDVILVLD 228 >gi|39997699|ref|NP_953650.1| cytidylate kinase [Geobacter sulfurreducens PCA] gi|59798057|sp|Q749Y7|KCY_GEOSL RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|39984591|gb|AAR35977.1| cytidylate kinase [Geobacter sulfurreducens PCA] gi|298506632|gb|ADI85355.1| cytidylate kinase [Geobacter sulfurreducens KN400] Length = 233 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 GL ++ +G GAGK+T LL L Sbjct: 6 RRGLIVAIDGPSGAGKSTITKLLADRL 32 >gi|218767303|ref|YP_002341815.1| probable signal recognition particle protein [Neisseria meningitidis Z2491] gi|9910688|sp|P57010|FTSY_NEIMA RecName: Full=Cell division protein ftsY homolog gi|121051311|emb|CAM07596.1| probable signal recognition particle protein [Neisseria meningitidis Z2491] Length = 421 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|325969208|ref|YP_004245400.1| ABC transporter [Vulcanisaeta moutnovskia 768-28] gi|323708411|gb|ADY01898.1| ABC transporter related protein [Vulcanisaeta moutnovskia 768-28] Length = 289 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 27/191 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEA--- 66 G GAGKTT I +L L + +V +E R + ++ Sbjct: 36 GPNGAGKTTLIRILTTELMPHGGEAYVAGFDVVRQVSEVRRRIAVIPQDARPISYMTPYE 95 Query: 67 ----EAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 ++ +R D R +L E G L ++ YQ + + + ++ Sbjct: 96 FVYSYLLLRGLSRSD-AREATRNSLDELGLWEL-----RNTPVYQLSGGMMRRVLVAAVL 149 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + + LD +GL R L + I +++ A Sbjct: 150 ASNAE------VVFLD-EPTVGLDAASRR---IVWNSLRRYSNGGASIFLTTH--YIEEA 197 Query: 182 RNQPDRCHIVD 192 D ++D Sbjct: 198 EQISDIVLLID 208 >gi|282856393|ref|ZP_06265672.1| twitching mobility protein [Pyramidobacter piscolens W5455] gi|282585764|gb|EFB91053.1| twitching mobility protein [Pyramidobacter piscolens W5455] Length = 361 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 26/69 (37%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G G+GK+T ++ L +L VT E E R +L + A Sbjct: 134 FTGPSGSGKSTALASLVDWLNETCRIHIVTLEDPIEFVHEGKRALLHQRQIGRDCPSFAA 193 Query: 69 IVFAAARLD 77 + A R D Sbjct: 194 GLRDALRQD 202 >gi|237725685|ref|ZP_04556166.1| conserved hypothetical protein [Bacteroides sp. D4] gi|323141315|ref|ZP_08076210.1| hypothetical protein HMPREF9443_00982 [Phascolarctobacterium sp. YIT 12067] gi|229435493|gb|EEO45570.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|322414202|gb|EFY05026.1| hypothetical protein HMPREF9443_00982 [Phascolarctobacterium sp. YIT 12067] Length = 181 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 41/221 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I G G GKTT S++ + + VH+ + ++ A L + Sbjct: 1 MNQGRIIVITGSPGTGKTTIASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA + AA R G ++ D FL+ Sbjct: 60 QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + ++ I+L + +KR R + LD + +V + E + F ++ Sbjct: 97 RALVREDYEVHY-IVLRASKEETMKRAVER------SKLDR--KTNVELVETMWEQFCNL 147 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220 + + ++D+ S ++ V E + R + LS Sbjct: 148 GIYESN---VIDTTTYSI----QETVSAVQEKIASRAALLS 181 >gi|225181866|ref|ZP_03735302.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1] gi|225167450|gb|EEG76265.1| ABC transporter related protein [Dethiobacter alkaliphilus AHT 1] Length = 422 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHV 53 + G I+ G GAGK+T + + + L+ + V RE + E AR + Sbjct: 27 IQGGEMIALLGPNGAGKSTLMRCISKALEPSSGTVLFNDREIRSLSSGEIARQL 80 >gi|138894060|ref|YP_001124513.1| adenylylsulfate kinase [Geobacillus thermodenitrificans NG80-2] gi|134265573|gb|ABO65768.1| Adenylylsulfate kinase [Geobacillus thermodenitrificans NG80-2] Length = 203 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + R L ++ +L G + Sbjct: 30 FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA R +++ V + + G+ +L S +A E + ++ + I Sbjct: 73 GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126 Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 I ++ P++ KR R +RE +D Sbjct: 127 --------IYVNCPLEECEKRDPKGLYKKARRGEIREFTGID 160 >gi|170732108|ref|YP_001764055.1| adenylyl-sulfate kinase [Burkholderia cenocepacia MC0-3] gi|169815350|gb|ACA89933.1| Adenylyl-sulfate kinase [Burkholderia cenocepacia MC0-3] Length = 187 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T +LLK L + R +L + G + Sbjct: 24 GVSGAGKSTLSNLLKEQLDARG-----------------LRTFVLDGDLLREGLNQDLGF 66 Query: 71 FAAARLDHVE---NVIRPALMEGKILL 94 A R +++ V R + G +++ Sbjct: 67 SDADRHENIRRTAEVARLMVDAGLVVI 93 >gi|154246521|ref|YP_001417479.1| spermidine/putrescine ABC transporter ATPase subunit [Xanthobacter autotrophicus Py2] gi|154160606|gb|ABS67822.1| spermidine/putrescine ABC transporter ATPase subunit [Xanthobacter autotrophicus Py2] Length = 372 Score = 38.9 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 21/36 (58%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 G F++ G G GKTT ++L+ FL+ ++ V+ Sbjct: 41 QGEFMTLLGPSGCGKTTLLNLIAGFLEADGGEIFVS 76 >gi|306820822|ref|ZP_07454446.1| cell division protein FtsY [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551140|gb|EFM39107.1| cell division protein FtsY [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 395 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 17/158 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ G GKTT I L + + V + AAE + + + Sbjct: 197 IVIVGVNGVGKTTTIGKLASKFKNEGKSVLLAAGDTFRAAAEEQLEIWSTRAGVDIVRHN 256 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS- 124 E+ A + + I+ A + IL+CD R ++ ++ L +I Sbjct: 257 ES---GADPSAVIYDAIQRAKSKNTDILICD---------TAGRLHNKVNLMNELSKIMR 304 Query: 125 -VQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACL 159 + + PD ++L + G + + E+ L Sbjct: 305 IIGKQYPDAKKEVLLVIDATTGQNALNQVKTFNEAVEL 342 >gi|225849714|ref|YP_002729948.1| cytidylate kinase [Persephonella marina EX-H1] gi|225646087|gb|ACO04273.1| cytidylate kinase [Persephonella marina EX-H1] Length = 218 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 41/242 (16%), Positives = 71/242 (29%), Gaps = 60/242 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ +G G+GK+T L R L Y T R V + Sbjct: 1 MIIAIDGPAGSGKSTVAKKLSRIL---GYTYIDT--------GAMYRAVAYKVKEEGIDP 49 Query: 65 EAEAIVFAAARLDHVENVIRPAL------MEGKILLCDRFLDSS-------------YAY 105 D V N+++ G + D SS A Sbjct: 50 ---------DNPDAVVNIMKRINIKLEPSDNGVKVFLDGEDVSSKIRTEEIGKIASKIAR 100 Query: 106 QGERDSS----QHLFLDSLQEISVQE------VMP--DCTIILDLPVDIGLKRVQNRYSL 153 E Q + ++ + P D I + ++ R + R+ Sbjct: 101 HPEVRKILVQKQREMGKKAKNAVIEGRDTGTVIFPDADLKIFMTASPEV---RARRRWEE 157 Query: 154 RESACLDYFERKDVMIHEKRRQIFLDIARNQPDR----CHIVDSA-HSFQSVATNILNIV 208 ++ LD + ++ K R ++ P R I+D+ S V IL +V Sbjct: 158 LKNKGLD-IDYNRILKEVKERDHLDQTRKDSPLRPAKDAIIIDTTNKSIDEVINQILELV 216 Query: 209 WE 210 + Sbjct: 217 RK 218 >gi|217032012|ref|ZP_03437513.1| hypothetical protein HPB128_187g39 [Helicobacter pylori B128] gi|298736311|ref|YP_003728837.1| adenylate kinase [Helicobacter pylori B8] gi|216946322|gb|EEC24928.1| hypothetical protein HPB128_187g39 [Helicobacter pylori B128] gi|298355501|emb|CBI66373.1| adenylate kinase [Helicobacter pylori B8] Length = 191 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 75/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ E I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILAAIKSSEKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V + + R R D + V H + R +FL Sbjct: 105 AQNEVILKSV---------IEVKVSENTAKERVLGRSRGADD---NEKV-FHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + +++ S + + + + Sbjct: 151 DPLVAIQNFYKAKHLHKVINGERSIEEIVNEMQKYILSF 189 >gi|217960385|ref|YP_002338945.1| hypothetical protein BCAH187_A2995 [Bacillus cereus AH187] gi|222096439|ref|YP_002530496.1| hypothetical protein BCQ_2779 [Bacillus cereus Q1] gi|229139579|ref|ZP_04268150.1| hypothetical protein bcere0013_26890 [Bacillus cereus BDRD-ST26] gi|217064039|gb|ACJ78289.1| hypothetical protein BCAH187_A2995 [Bacillus cereus AH187] gi|221240497|gb|ACM13207.1| hypothetical Cytosolic Protein [Bacillus cereus Q1] gi|228644126|gb|EEL00387.1| hypothetical protein bcere0013_26890 [Bacillus cereus BDRD-ST26] Length = 282 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|170743473|ref|YP_001772128.1| plasmid partitioning protein RepA [Methylobacterium sp. 4-46] gi|168197747|gb|ACA19694.1| plasmid partitioning protein RepA [Methylobacterium sp. 4-46] Length = 405 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GKTT + L ++L K Y V L EF EA ++AA Sbjct: 133 GSGKTTTAAHLAQYLALKGYRVLAVDLDPQASLTA------LHGYQPEFDVEANQTLYAA 186 Query: 74 ARLD 77 R D Sbjct: 187 IRYD 190 >gi|121633921|ref|YP_974166.1| signal recognition particle protein [Neisseria meningitidis FAM18] gi|120865627|emb|CAM09347.1| probable signal recognition particle protein [Neisseria meningitidis FAM18] gi|325139277|gb|EGC61821.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis ES14902] Length = 421 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|121703808|ref|XP_001270168.1| signal sequence receptor alpha subunit, putative [Aspergillus clavatus NRRL 1] gi|119398312|gb|EAW08742.1| signal sequence receptor alpha subunit, putative [Aspergillus clavatus NRRL 1] Length = 654 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 21/137 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65 IS G+ G GK+T++S + FL + NY V + T + A + + E A Sbjct: 447 ISIVGVNGVGKSTNLSKICYFLLQNNYRVLIAA--CDTFRSGAVEQLRVHARNLKELSAR 504 Query: 66 A---EAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFL 117 E ++ NV + A+ G ++L D R + + Sbjct: 505 ETAGEVELYEKGYGKDAANVAKDAVEYGAANDFDVVLID---------TAGRRHNDQRLM 555 Query: 118 DSLQEISVQEVMPDCTI 134 SL++ + PD Sbjct: 556 SSLEKFAKFA-KPDKIF 571 >gi|58221317|gb|AAW68301.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 140 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGCNNVTVISQT-- 107 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|15889431|ref|NP_355112.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] gi|15157291|gb|AAK87897.1| ABC transporter, nucleotide binding/ATPase protein [Agrobacterium tumefaciens str. C58] Length = 352 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 26/165 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH------VTREPGGTPAAEAARHVLLS 56 G F+SF G G GKTT + ++ F + T P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFEIPTGGSIVINGKDQTTLRPNQRNIGMVFQAYALF 87 Query: 57 CGVDEFGAEAEAIVFA----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 ++ + A + A A V+ +++ +E L DR+ YQ Sbjct: 88 PNMNVYENVAFGLKVAGKPKAEIDARVKEMLQLIHLEH---LADRYP-----YQMSGGQQ 139 Query: 113 QHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRE 155 Q + L P+ ++LD L RV R +R+ Sbjct: 140 QRVALAR-----ALAPKPE-VLLLDEPLSALDAKIRVSLREEIRQ 178 >gi|148550186|ref|YP_001270288.1| signal recognition particle-docking protein FtsY [Pseudomonas putida F1] gi|148514244|gb|ABQ81104.1| signal recognition particle-docking protein FtsY [Pseudomonas putida F1] Length = 497 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + ++ A+ Sbjct: 300 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 355 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 356 TGADSASVIFDAVQAAKARGVDVLIAD 382 >gi|330965439|gb|EGH65699.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. actinidiae str. M302091] Length = 514 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 315 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 370 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 371 TGADSASVIFDAVQAAKARGIDVLIAD 397 >gi|319760308|ref|YP_004124246.1| adenylylsulfate kinase [Candidatus Blochmannia vafer str. BVAF] gi|318039022|gb|ADV33572.1| adenylylsulfate kinase [Candidatus Blochmannia vafer str. BVAF] Length = 205 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 64/218 (29%), Gaps = 69/218 (31%) Query: 7 IS--FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I F G+ G+GKTT S L+ L + + +L +G Sbjct: 35 IVLWFTGLSGSGKTTLASFLEERLYHEGISTY-----------------VLDGDNIRYGL 77 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + R +++ V G ++L A+ S + + Sbjct: 78 CSNLSFSHQDRYENIRRAGEVAWLMFDAGLVVL--------VAFISPCSSDRKMVR---N 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI----- 176 I +D P+++ R + K++ +++ ++ Sbjct: 127 MFFKNCF---LEIYIDTPIEVCKSR----------------DSKNL--YKQVQEGKIKNF 165 Query: 177 ------FLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + PD +D + Q + + + V Sbjct: 166 TGIDSPYE--SPENPDIY--LDGTKTIQELINQLFDAV 199 >gi|291563833|emb|CBL42649.1| Polyphosphate:AMP phosphotransferase [butyrate-producing bacterium SS3/4] Length = 493 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 20/32 (62%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 +I+F+G +GAGK I L + L + +DV+ Sbjct: 34 YITFDGYDGAGKGVQIGRLMQALDPRGFDVYT 65 >gi|288559422|ref|YP_003422908.1| signal recognition particle SRP54 protein [Methanobrevibacter ruminantium M1] gi|288542132|gb|ADC46016.1| signal recognition particle SRP54 protein [Methanobrevibacter ruminantium M1] Length = 444 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 14/117 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G++G+GKTT I L R+LQRK + V PAA L +E + Sbjct: 102 ILFLGLQGSGKTTTIGKLCRYLQRKGFSPAVVCTDTWRPAAYEQ----LKQLTEEMQIQL 157 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 LD E ++ KI++ D R ++ ++ + ++ Sbjct: 158 YGDPDNKDALDLAEKGLKHF-KNQKIIIFD---------TAGRHKNEEDLIEEMNKL 204 >gi|238755111|ref|ZP_04616458.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473] gi|238706671|gb|EEP99041.1| Shikimate kinase 1 [Yersinia ruckeri ATCC 29473] Length = 195 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 68/219 (31%), Gaps = 54/219 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +F+ G GAGKTT + L + L Y T + ++ G Sbjct: 22 MTQTIFMV--GARGAGKTTIGNALAQAL---GYRFIDTDSFMQQTSLLTVAEIVAREGWS 76 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + V + G +L + A+ Sbjct: 77 GFRRRESLAL------QTVTSPETVVATGGGAVLS----ADNRAFMRRHG---------- 116 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQ------NRYSLRESACLDYFERKDVMIHEKRR 174 I L DI +R+ R SL ++ E +DV+ R Sbjct: 117 -----------LVIYLRASADILAERLAEEPEDAQRPSLTGKPIVE--EMQDVL---AVR 160 Query: 175 QI-FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + + D+A +++D++ Q V I +++ + + Sbjct: 161 ETMYQDVAH------YVIDASRDPQWVVEQIQSLLLDAI 193 >gi|256394650|ref|YP_003116214.1| metallophosphoesterase [Catenulispora acidiphila DSM 44928] gi|256360876|gb|ACU74373.1| metallophosphoesterase [Catenulispora acidiphila DSM 44928] Length = 870 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 74/205 (36%), Gaps = 50/205 (24%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE-FGA 64 + G G+GK+T + + P +++A R ++ D+ Sbjct: 25 LVVLIGSSGSGKSTFAR---KHFR-----------PTAIVSSDACRGIVSDDENDQSATP 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EA A++ H+ V L G + + D + Q ++L +++ Sbjct: 71 EAFALLH------HIAGV---RLRRGLLTVVD------------ATNVQTKAREALVKLA 109 Query: 125 V-QEVMPDCTIILDLPVDIGLKRVQNRYSLRE--SACLDYFERKDVMIHEKRRQIFLDIA 181 +V+P I+LD+P + + R R + + + R+ R ++A Sbjct: 110 REHDVLP-IAIVLDIPERVCVDRNAERADRADLPARVISRQRRE-------LRSGLRNLA 161 Query: 182 RNQPDRCHIVDSAHSFQSVATNILN 206 R + H++ S + V ++ Sbjct: 162 REGFRKVHVL---KSVEEVDQAVIA 183 >gi|159905567|ref|YP_001549229.1| chromatin associated protein KTI12 [Methanococcus maripaludis C6] gi|159887060|gb|ABX01997.1| Chromatin associated protein KTI12 [Methanococcus maripaludis C6] Length = 264 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 72/208 (34%), Gaps = 42/208 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G+ GK+T + + + KN D + + R + Sbjct: 10 MLIILTGLPSVGKSTFSKAISKKMAEKNIDNIIL-------GTDLIRE-----SFPVWNE 57 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + D +I+ AL ++ D D++Y Y +R ++ +E + Sbjct: 58 SYEEFI-----RDSNNYLIKEALRNKFSVIVD---DTNY-YNSKRR----DLINIAKECN 104 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-DYFERKDVMIHEKRRQIFLDIARN 183 V I L P+D+ LKR R + + + +E+ D A + Sbjct: 105 TNYVK----IYLKAPLDLLLKRNIERGQKIPNEVIKNMYEKFDTPGT--------KYAWD 152 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 PD VD+ ILN + E+ Sbjct: 153 LPD--ITVDTTEKID--HNEILNEILEI 176 >gi|153007417|ref|YP_001368632.1| putative fructose transport system kinase [Ochrobactrum anthropi ATCC 49188] gi|151559305|gb|ABS12803.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 213 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 51/155 (32%), Gaps = 16/155 (10%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD--VHVTREPGGTPAAEAARHVLLSCGVDEF 62 L ++ G GAGK+T L + + + V + + LLS Sbjct: 24 LIVAIAGPPGAGKSTISDYLLHAINKGGETPSIVVPMDGFHLDDGILDQRGLLSRKGSPP 83 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + RL E I I + DR L+ S A + L Sbjct: 84 TFDCAGFAVLLQRLKQAEGEI-------FIPVFDRSLELSRAAASVVGPEHRVLLVEGNY 136 Query: 123 ISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + + P D T+ LD+P +R+ R Sbjct: 137 LLLDQQPWTQLAPFFDMTLYLDVPFAELERRLIER 171 >gi|27452784|gb|AAO12291.1| thymidine kinase [Porcine lymphotropic herpesvirus 2] Length = 578 Score = 38.9 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 66/197 (33%), Gaps = 37/197 (18%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCGVDEF 62 FEG GK+T I+ L++ ++ + EP + + V + Sbjct: 261 FEGAMAVGKSTMITHLQQVIEED--SIITFPEPMYYWTKVYNNVLKQIYKLNKYYRVGKE 318 Query: 63 GAEAEAI-------------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE- 108 A AE + R H ++ P K ++ DR S+ Sbjct: 319 SASAELLACQVKFMTPLKTMWSYKQRCMHPDSPSAPVTPFDKWVIFDRHPLSATVVFPLI 378 Query: 109 ----RDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 S + F++ L + D +++ L +++ KR++ R+ E Sbjct: 379 LLKKGMLSFNDFINLLNTFTAANG---DTIVLMSLDIEVNYKRLKRRFRKYEGFV----- 430 Query: 164 RKDVMIHEKRRQIFLDI 180 D+ ++ + F + Sbjct: 431 --DIAHLKEVKAAFHAL 445 >gi|322693736|gb|EFY85586.1| signal sequence receptor alpha subunit [Metarhizium acridum CQMa 102] Length = 654 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 20/136 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-----DE 61 IS G+ G GK+T++S + FL + Y V + G T + A + + Sbjct: 446 ISIVGVNGVGKSTNLSKICFFLLQNKYKVLIAA--GDTFRSGAVEQLAVHVRNLKELTAR 503 Query: 62 FGAEAEAIV--FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD 118 G E + ++ + A EG ++L D R + + Sbjct: 504 EGGRVELYQKGYGKDAATVAKDAVSHAAQEGFDVVLID---------TAGRRHNDQRLMS 554 Query: 119 SLQEISVQEVMPDCTI 134 SL++ + PD + Sbjct: 555 SLEKFAKFA-QPDKIL 569 >gi|312891412|ref|ZP_07750929.1| deoxynucleoside kinase [Mucilaginibacter paludis DSM 18603] gi|311296106|gb|EFQ73258.1| deoxynucleoside kinase [Mucilaginibacter paludis DSM 18603] Length = 204 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 59/177 (33%), Gaps = 29/177 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I+ G GAGKTT LL + G P EA + L + Sbjct: 3 IAIVGNIGAGKTTLTELLAK-------------NYGWDPLYEAVDNNPYLEDFYSDMKRW 49 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLF 116 + + F +R + + + ++ DR + D+ + G + Sbjct: 50 SFNLQIYFLNSRFQQIIEIQKGQRQ----IIQDRTIYEDAFIFAENLHDMGLMTTRDFEN 105 Query: 117 LDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYFERKDVMIHE 171 S+ + + + PD I L V + +Q R ES LDY + + + Sbjct: 106 YRSIFDNITEFIKPPDLLIYLKASVPTLVSNIQRRGREYESGIRLDYLSKLNDKYQK 162 >gi|302389883|ref|YP_003825704.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani DSM 16646] gi|302200511|gb|ADL08081.1| 3-dehydroquinate dehydratase, type II [Thermosediminibacter oceani DSM 16646] Length = 346 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 27/210 (12%), Positives = 60/210 (28%), Gaps = 42/210 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + I G G+GKT+ +L L T E + G + Sbjct: 1 MKNKTNIVLIGFMGSGKTSIGKMLAEKL---GKRFLDTDELIRQECGMEISEIFHKFGEE 57 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 F + + + A ++ G ++ L Sbjct: 58 YFRNKE-------------KETVERAAAREGTVIAT----------GGGVVLNPENMEKL 94 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + L + L+R+ + E + + I+ KR ++ Sbjct: 95 RRSG-------IIVWLRASEEEILQRIS--GDASRPLASNKSESEILEIYSKRLNLYATY 145 Query: 181 ARNQPDRCHIVDSA-HSFQSVATNILNIVW 209 A I++++ +++A I+ + Sbjct: 146 AD------IIIETSGKDKEAIAIEIIKHLK 169 >gi|270295259|ref|ZP_06201460.1| conserved hypothetical protein [Bacteroides sp. D20] gi|282877641|ref|ZP_06286456.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] gi|270274506|gb|EFA20367.1| conserved hypothetical protein [Bacteroides sp. D20] gi|281300213|gb|EFA92567.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310] Length = 253 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 1 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 54 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 55 ---HEMGLIDSSTYFKALACDHFRRIKKN------------------AYTIVKSNAVNAL 93 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ +++ PD + D+P Sbjct: 94 DDAERMIATEDMKPD-VVFFDMP 115 >gi|227505036|ref|ZP_03935085.1| dephospho-CoA kinase [Corynebacterium striatum ATCC 6940] gi|227198400|gb|EEI78448.1| dephospho-CoA kinase [Corynebacterium striatum ATCC 6940] Length = 199 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 31/220 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEA-ARHVLLSC 57 I G G+GK+T LLK + D+ EP T AEA ++ Sbjct: 2 KLIGLTGGIGSGKSTVARLLKEQGWTVVDADQIARDIVEPGEPALTELAEAFGADIIRED 61 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G G A AA + ++ P + ++ + R + + + Sbjct: 62 GSLNRGLLATRAFGDAASTQRLNDITHPRIEA----------ETQRRFDAARSAGEEFVV 111 Query: 118 DSLQEISVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 + + + + D TI++D+ V ++R+ L E+ + Sbjct: 112 YDMPLLVDKGLHTGMDYTIVVDVDVATRVQRLVEFRGLDETDARRRIAAQISD------D 165 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L +A ++D+ + + + + +V E+ K+ Sbjct: 166 ARLAVAD------FVIDNNGALEELPGQVERVVPEIAAKK 199 >gi|36939157|gb|AAQ86949.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 311 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 278 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 279 TAGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|56964654|ref|YP_176385.1| deoxypurine kinase [Bacillus clausii KSM-K16] gi|56910897|dbj|BAD65424.1| deoxypurine kinase [Bacillus clausii KSM-K16] Length = 209 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 51/183 (27%), Gaps = 35/183 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GKTT L L K T + + L +F + Sbjct: 10 ITVAGTVGVGKTTLTHALADELNFK------------TSFEKVDNNPYLDKFYRDFERWS 57 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + F A R + + EG + DR + + + + + + Sbjct: 58 FHLQIYFLAERF----KEQKRMVEEGGGYIQDRSIYEDTGIFAKMHADKGTMTQTDYQTY 113 Query: 125 V----------QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 PD I L D L R+Q R E + + E+ Sbjct: 114 TSLFEAMVMTPYFPRPDVLIYLHGDFDSILDRIQARGREMEK-------QTPLSYWEEMY 166 Query: 175 QIF 177 + Sbjct: 167 NRY 169 >gi|309785182|ref|ZP_07679813.1| uncharacterized ATP-binding protein yghT [Shigella dysenteriae 1617] gi|308926302|gb|EFP71778.1| uncharacterized ATP-binding protein yghT [Shigella dysenteriae 1617] Length = 209 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 23/159 (14%), Positives = 45/159 (28%), Gaps = 35/159 (22%) Query: 72 AAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQGER---DSSQHLFLDSL------ 120 AR + G I+L DR+ AY G + F+ L Sbjct: 68 FVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQQRK 127 Query: 121 --QEISVQEVMPDCTIILDLPVDIGLKRV--QNRYSLRESACLDYFERKDVMIHEKRRQI 176 ++ PD I L++ +++ R R SL + + Sbjct: 128 AFHWMASH--KPDLVIKLNVDLEVACMRKPDHKRQSLARKIAI----TPQLTF------G 175 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + +D+ + V + + + + R Sbjct: 176 GAQLVD--------IDANRPLEQVLIDAEKAITDFMTAR 206 >gi|294501602|ref|YP_003565302.1| putative ABC transporter ATP-binding protein [Bacillus megaterium QM B1551] gi|294351539|gb|ADE71868.1| putative ABC transporter, ATP-binding protein [Bacillus megaterium QM B1551] Length = 259 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 21/141 (14%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G F+SF G G GKTT +S++ ++ + V + E GT + Sbjct: 36 GEFVSFLGPSGCGKTTLLSIIAGLIEPSSGSVTIDGENIGTSVPNIGYMLQQDYLFPWKT 95 Query: 64 AEAEAIVFAAARLDHVENVIRPAL-------MEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + ++ R + + AL ++G +DS Y +Q Q + Sbjct: 96 IKENILLGLEIRGQLTDETEKKALLLLKEIGLQG--------VDSLYPHQLSGGMRQRVA 147 Query: 117 LDSLQEISVQEVMPDCTIILD 137 L ++ +++ P ++LD Sbjct: 148 L--VRTLAID---PAI-LLLD 162 >gi|269123263|ref|YP_003305840.1| guanylate kinase [Streptobacillus moniliformis DSM 12112] gi|268314589|gb|ACZ00963.1| guanylate kinase [Streptobacillus moniliformis DSM 12112] Length = 181 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 24/168 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LFI G G+GK+T L++ L TR+ + + + Sbjct: 1 MKGKLFIV-SGPSGSGKSTVTKLVRDMLNIPLAISVTTRQIRTGEVDGKDYYFITKEEFE 59 Query: 61 EFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + E +A ++ + + I L G+ ++ + QG + Sbjct: 60 KKINENGLFEYANVHGNYYGTLNSEIEKHLENGQNVILE------IDVQGGVIAKNKRND 113 Query: 118 DSLQEISVQEVMPDCTIILDLP-VDIGLKRVQNRYSLRESACLDYFER 164 L I P ++ KR++ R + E E Sbjct: 114 SIL-------------IFFKAPSLEELEKRLRGRNTDSEKVIKKRLEN 148 >gi|222034708|emb|CAP77450.1| Uncharacterized ATP-binding protein yghS [Escherichia coli LF82] gi|307625411|gb|ADN69715.1| hypothetical protein UM146_01430 [Escherichia coli UM146] Length = 232 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225 Query: 207 IVWELV 212 + + Sbjct: 226 AIHAAL 231 >gi|222081279|ref|YP_002540642.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC [Agrobacterium radiobacter K84] gi|221725958|gb|ACM29047.1| ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC [Agrobacterium radiobacter K84] Length = 562 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 22/183 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK+T ++L L ++ V T E + L + ++ Sbjct: 376 GPSGAGKSTLFAILASELAAESGTVETVMASTLTQRTELFQDSLRDNLRLAASEANDDML 435 Query: 71 FAA-ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 ++A A + +V AL +G +D+ G S +L + ++ Sbjct: 436 YSALADAGLLADVQ--ALPKG--------IDTRLGEGGLGLSGGQSRRLALARLFLRGTK 485 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCH 189 +LD GL R R +R A + H + R+ +IA DR Sbjct: 486 ---LWLLD-EPTEGLDRETGRDVMRRLASRSRGRSLVIATHIR-REA--EIA----DRIV 534 Query: 190 IVD 192 ++D Sbjct: 535 VLD 537 >gi|118090064|ref|XP_420493.2| PREDICTED: similar to bifunctional ATP sulfurylase/adenosine 5-phosphosulfate kinase [Gallus gallus] Length = 800 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 235 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 280 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ + I +P Sbjct: 281 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 328 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 329 FFEVFVDAPLHVCEQR 344 >gi|150015820|ref|YP_001308074.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052] gi|149902285|gb|ABR33118.1| ABC transporter related [Clostridium beijerinckii NCIMB 8052] Length = 255 Score = 38.9 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 G FIS G G GK+T ++++ L+ N V E Sbjct: 33 GKFISILGPSGCGKSTLLNIMSGLLEPSNGSVLYKGE 69 >gi|331697307|ref|YP_004333546.1| Guanylate kinase [Pseudonocardia dioxanivorans CB1190] gi|326951996|gb|AEA25693.1| Guanylate kinase [Pseudonocardia dioxanivorans CB1190] Length = 220 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 30/176 (17%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 G I G G GK++ ++ L+ L ++ V TR P + D Sbjct: 16 RGRLIVLAGPSGVGKSSVVAQLRERLPELHFSVSATTRAPRVGEVDGRDYRFVSPAEFDG 75 Query: 62 FGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + +A R + A EG+ +L + +D QG R Sbjct: 76 LIERGELLEWAEIHGGLQRSGTPAAEVERARAEGRPVLVE--VD----LQGAR------- 122 Query: 117 LDSLQEISVQEVMPD-CTIILDLP-VDIGLKRVQNRYSLRESACLDYFE--RKDVM 168 +V++ +P+ T+ LD P D +R+ +R + + E R+++ Sbjct: 123 -------AVKKAVPEAVTVFLDPPSFDELARRLGSRGTESAAQLARRLETAREELA 171 >gi|317122951|ref|YP_004102954.1| daunorubicin resistance ABC transporter ATPase [Thermaerobacter marianensis DSM 12885] gi|315592931|gb|ADU52227.1| daunorubicin resistance ABC transporter ATPase subunit [Thermaerobacter marianensis DSM 12885] Length = 389 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 44/232 (18%), Positives = 76/232 (32%), Gaps = 45/232 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKN-----------YDVHVTREPGGTPAAEAARHVLLSCGV 59 G GAGKTT I +L L+ + H R+ G E A LL+ Sbjct: 48 GPNGAGKTTTIKVLLSLLRPSGGTARVLGVDVAQEPHRVRQLIGWVPQETAVDPLLTGRE 107 Query: 60 DEFGAEAEAIV---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + AA R+D + ++ A +++ Y G L Sbjct: 108 NLLLVAGLYHLPPGEAARRVDELLALVELAGAADRVV---------REYSGGMRKRLDLA 158 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + + + + LD +GL +Q R L + F I Sbjct: 159 MGLVHRPA--------VLFLD-EPTLGLD-IQTRRRLWQYIRA--FRELGTTILLTTH-- 204 Query: 177 FLDIARNQPDRCHIVD-----SAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 +L+ A DR I+D + + + E +Q R++P ++ Sbjct: 205 YLEEADQLCDRVAIIDRGRIRALGTPDELKARYAA---ESLQLRLAPGQDRR 253 >gi|227820699|ref|YP_002824669.1| putative fructose transport system kinase [Sinorhizobium fredii NGR234] gi|227339698|gb|ACP23916.1| conserved hypothetical protein contains uridine kinase related domain [Sinorhizobium fredii NGR234] Length = 206 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 26/78 (33%), Gaps = 4/78 (5%) Query: 3 SGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLL--SCG 58 +G FI G GAGK+T L + +V + + A LL Sbjct: 17 AGRFIVAIAGPPGAGKSTLSEALAAAIAETGENVAVLPMDGFHMDNAVLVEKGLLQRKGA 76 Query: 59 VDEFGAEAEAIVFAAARL 76 + F A AA R Sbjct: 77 PETFDVRAFLSTLAAVRA 94 >gi|123442175|ref|YP_001006156.1| arginine/ornithine transport system ATPase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089136|emb|CAL11975.1| putative GTPase/ATPase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 331 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64 G GAGK+T + L L + + V + +P GG+ + R + LS F Sbjct: 61 GTPGAGKSTFLEALGEELLAQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 120 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94 + +I G I++ Sbjct: 121 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 151 >gi|160880461|ref|YP_001559429.1| deoxyadenosine kinase [Clostridium phytofermentans ISDg] gi|160429127|gb|ABX42690.1| Deoxyadenosine kinase [Clostridium phytofermentans ISDg] Length = 220 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 36/229 (15%), Positives = 78/229 (34%), Gaps = 33/229 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G+ G GKT++ ++L Q +V + + + +E Sbjct: 1 MVIVVGGMIGLGKTSYATMLGEHFQT---EVFY-----ESVEGNKILPLFYTSSEEEIQK 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ------GERDSSQHLFLD 118 + + LD I+ A +L DR + + + G + + Sbjct: 53 KRYPFLLQLWFLDTRFRSIKQAFTNQNNIL-DRSIYEDWYFAKKNMELGRISDLEMEIYE 111 Query: 119 SLQEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L ++E+ PD I L + +KR+Q R E + + + Sbjct: 112 KLLHNMMEELKGLPKKSPDLMIYLKGSFETVIKRIQLRGREFE------IDNSLMDYYRF 165 Query: 173 RRQIFLDIARN--QPDRCHIVDSAHS----FQSVATNILNIVWELVQKR 215 + + D +N I+D+ H+ + ++ V E ++++ Sbjct: 166 LWEGYDDWVQNYYNASDILIIDTDHTDIVNKEEDRLRVIREVEEKLKRQ 214 >gi|77735371|ref|NP_001029382.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Bos taurus] gi|74268037|gb|AAI02373.1| 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Bos taurus] gi|296486752|gb|DAA28865.1| bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Bos taurus] Length = 624 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ + I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARRIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|54042814|sp|Q58954|NTPTH_METJA RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase THEP1; AltName: Full=Nucleoside triphosphate phosphohydrolase Length = 170 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 28/109 (25%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTRE--PGGTPAAEAARHVLLSCGVDE 61 FI+ G+ G GKTT + L+ Y V +T+E GG + L + Sbjct: 4 FIT--GMPGVGKTTLALKIAEKLKELGYKVGGFITKEIRDGGKRVGFKI--ITLDTNEET 59 Query: 62 FGAEAEAIVF----------AAARLDHVENV----IRPALMEGKILLCD 96 + + A +++++NV I+ AL + I++ D Sbjct: 60 I------LAYVGDGKIKVGKYAVFIENLDNVGVEAIKRALKDADIIIID 102 >gi|83032925|ref|XP_729252.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] gi|23486518|gb|EAA20817.1| Arabidopsis thaliana At4g21800/F17L22_260 [Plasmodium yoelii yoelii] Length = 473 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 13/102 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54 I+ G+ G+GKTT+I L +L+ + V + P ++ + V+ Sbjct: 183 IAI-GMAGSGKTTYIGALYNYLKIQKKKKVYTINLDPAVKHLQYPTNIDIRDSIKYHEVM 241 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + GA + A R D V ++ + ++ D Sbjct: 242 KEYKLGPNGAIMTCLNLFATRFDKVIELLEKRKHKLNYIIVD 283 >gi|325293512|ref|YP_004279376.1| spermidine/putrescine ABC transporter ATP-binding protein [Agrobacterium sp. H13-3] gi|325061365|gb|ADY65056.1| spermidine/putrescine ABC transporter, ATP-binding protein [Agrobacterium sp. H13-3] Length = 352 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 56/165 (33%), Gaps = 26/165 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH------VTREPGGTPAAEAARHVLLS 56 G F+SF G G GKTT + ++ F + T P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFEIPTGGSIVINGKDQTTLRPNQRNIGMVFQAYALF 87 Query: 57 CGVDEFGAEAEAIVFA----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 ++ + A + A A V+ +++ +E L DR+ YQ Sbjct: 88 PNMNVYENVAFGLKVAGKPKAEIDARVKEMLQLIHLEH---LADRYP-----YQMSGGQQ 139 Query: 113 QHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRE 155 Q + L P+ ++LD L RV R +R+ Sbjct: 140 QRVALAR-----ALAPKPE-VLLLDEPLSALDAKIRVSLREEIRQ 178 >gi|319745950|gb|EFV98233.1| hypothetical protein HMPREF9171_0229 [Streptococcus agalactiae ATCC 13813] Length = 195 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 80/221 (36%), Gaps = 42/221 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ +G GKTT + ++ K Y +P + L ++ Sbjct: 1 MIIAIQGGMAVGKTTALKII-----EKVYPKIAISFEDISPVVDKINKHQLD--NNKLDD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114 E + H + + + +I+L D ++ Y S+ Sbjct: 54 YCEIQQLF---IQHERDRYE-LVRDNEIVLMDYGAEEIAFYTQYFPKVAGYSWTLPSNLL 109 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH---E 171 L ++ L+E D I LD + +R +N ++ R +F K H Sbjct: 110 LEVNRLKECFA-----DYIIFLDADETVLYQRQKNDFNRRRH----FF--KWYTYHLLPA 158 Query: 172 KRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211 K + +LD + H +++ H + + VA I++I+ +L Sbjct: 159 K--KHYLD---TFSNVIH-INTNHLNAEEVAEKIIDIIRKL 193 >gi|126657500|ref|ZP_01728656.1| guanylate kinase [Cyanothece sp. CCY0110] gi|126621204|gb|EAZ91917.1| guanylate kinase [Cyanothece sp. CCY0110] Length = 184 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 26/175 (14%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M SG I G G GK T + L + + TR P + L Sbjct: 1 MASGKLIVLTGPSGVGKGTLVRALLNRHPQLYLSISATTRSPRQGEVEGNDYYFLSKSAF 60 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 + + + + +A + + +G ++L L Sbjct: 61 ESMIEQDQLLEWAEYAGNYYGTPRAKVEEKINQGLLVL--------------------LE 100 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 ++ + +++ PD I LP + R+++R + E+A L +R + Sbjct: 101 IEVIGAKAIKNSFPDALRIFILPPSIEELEYRLRSRKTDSEAAILRRLDRAKEEL 155 >gi|60101682|gb|AAX13965.1| chloroplast phosphoribulokinase [Chondrus crispus] Length = 377 Score = 38.9 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 55/175 (31%), Gaps = 25/175 (14%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAEAEAIVFA 72 G GK+T + + +V T P G + L + A A+ A Sbjct: 52 GCGKSTFLRRVTGIF---GTEVSKTHTPVGNFISVICLDDYHLHDRMGRREARVTALDEA 108 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP-- 130 A + + + I+ AL EGK + + + ++ I ++ + P Sbjct: 109 ANNFELMASQIQ-ALREGK------SIMKPIYNHETGEIDECELVEPNHIIVIEGLHPMY 161 Query: 131 --------DCTIILDLPVDIGLKRVQNRYSLRESACLD----YFERKDVMIHEKR 173 D ++ LDL ++ + R L+ E + + Sbjct: 162 DTRVKKSLDFSVYLDLADEVKIAWKIQRDMAERGHSLENILASIESRKPDFAQFV 216 >gi|330874697|gb|EGH08846.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 516 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 317 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 372 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 373 TGADSASVIFDAVQAAKARGIDVLIAD 399 >gi|321315326|ref|YP_004207613.1| adenylyl-sulfate kinase [Bacillus subtilis BSn5] gi|320021600|gb|ADV96586.1| adenylyl-sulfate kinase [Bacillus subtilis BSn5] Length = 197 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 34/139 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + R L + Y V ++L G + Sbjct: 33 GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75 Query: 71 FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R +++ V + + +G I++ A+ + + ++ E Sbjct: 76 SDEDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRQQVRELVEAGEFNE 127 Query: 128 VMPDCTIILDLPVDIGLKR 146 + + +DI +R Sbjct: 128 ------VYIKCDLDICEQR 140 >gi|281203994|gb|EFA78190.1| UMP-CMP kinase [Polysphondylium pallidum PN500] Length = 194 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 78/206 (37%), Gaps = 39/206 (18%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK T + + R L D+ + G+ E ++ + + Sbjct: 13 GGPGSGKGTQCANIVRDFGYVHLSAG--DLLRAEQASGSEYGEMIATMIKNGEI------ 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDSLQEI 123 V +++ L++ K +L D +Y G + + + ++D+++++ Sbjct: 65 -------------VPSIVTVNLLK-KAILSD--TTKNYLVDGFPRNEENNNSWVDTMKDL 108 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE-KRRQIF-LDIA 181 + + D P ++ +R+ R L D E + + F +D+ Sbjct: 109 VDTKF----VLFFDCPEEVMTERLLGRG-LSSGRTDDNLESIKKRFNTFNTQTKFVVDLY 163 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNI 207 + ++ IV+S + V T++ +I Sbjct: 164 SKE-NKVKIVNSNRAVDLVYTDVKSI 188 >gi|253574584|ref|ZP_04851925.1| ABC transporter ATP-binding protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251846289|gb|EES74296.1| ABC transporter ATP-binding protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 310 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 3/87 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G ++ G G+GK+T + +++ L+ D R G + + E + G Sbjct: 30 KGYIVALVGPNGSGKSTMMQFIQQTLR---PDAGEIRWFGQSFSGELPLELRQQIGYVPE 86 Query: 63 GAEAEAIVFAAARLDHVENVIRPALME 89 E E A R + P E Sbjct: 87 APEPEENYMTAERAAEFRSQWYPTWDE 113 >gi|227821776|ref|YP_002825746.1| adenylate kinase [Sinorhizobium fredii NGR234] gi|227340775|gb|ACP24993.1| adenylate kinase [Sinorhizobium fredii NGR234] Length = 192 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 69/214 (32%), Gaps = 41/214 (19%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G GAGK T LL R T + R + E G A+A Sbjct: 5 FLGPPGAGKGTQAKLLTE---RYGIPQLST--------GDMLRAAV--AQATEVGKRAKA 51 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL---QEISV 125 ++ V + I ++ DR A D ++ + + Sbjct: 52 VM---DAGQLVSDEIVNE------IVSDRIDAQDCAKGFILDGYPRTVPQAIALDRMLDS 102 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHEKRR--- 174 + + D + L + ++R++NR ++R + F+R+ EK Sbjct: 103 KGLKLDAVVELKVDEAALVRRMENRVAETVAAGGTVRSDDNPEAFKRRLTEYREKTAPLS 162 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + + Q + VD ++V I I+ Sbjct: 163 EHY-----AQTGQLKTVDGMADVEAVTAEIDKIL 191 >gi|225628587|ref|ZP_03786621.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti str. Cudo] gi|260166957|ref|ZP_05753768.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella sp. F5/99] gi|261756342|ref|ZP_06000051.1| spermidine/putrescine ABC transporter [Brucella sp. F5/99] gi|225616433|gb|EEH13481.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti str. Cudo] gi|261736326|gb|EEY24322.1| spermidine/putrescine ABC transporter [Brucella sp. F5/99] Length = 353 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|224369570|ref|YP_002603734.1| Cmk1 [Desulfobacterium autotrophicum HRM2] gi|223692287|gb|ACN15570.1| Cmk1 [Desulfobacterium autotrophicum HRM2] Length = 231 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 14/26 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFL 28 I+ +G G+GKTT L+ R L Sbjct: 2 KPKIITIDGPAGSGKTTVSKLVARQL 27 >gi|254525852|ref|ZP_05137904.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9202] gi|221537276|gb|EEE39729.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9202] Length = 211 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 + G+ I F G+ G+GK+T + L L H+ R + RH L Sbjct: 33 HKGMVIWFTGLSGSGKSTLANALNEVL-------HLERFSTYVLDGDNIRHGL 78 >gi|16078624|ref|NP_389443.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221309435|ref|ZP_03591282.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|221313760|ref|ZP_03595565.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318684|ref|ZP_03599978.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. JH642] gi|221322955|ref|ZP_03604249.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. SMY] gi|7387596|sp|O34577|CYSC1_BACSU RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|2462959|emb|CAA04412.1| putative adenosine 5-phosphosulfate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|2633933|emb|CAB13434.1| adenylylsulfate kinase [Bacillus subtilis subsp. subtilis str. 168] gi|291484112|dbj|BAI85187.1| adenylylsulfate kinase [Bacillus subtilis subsp. natto BEST195] Length = 197 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 34/139 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + R L + Y V ++L G + Sbjct: 33 GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNRDLGF 75 Query: 71 FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R +++ V + + +G I++ A+ + + ++ E Sbjct: 76 SDEDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRQQVRELVEAGEFNE 127 Query: 128 VMPDCTIILDLPVDIGLKR 146 + + +DI +R Sbjct: 128 ------VYIKCDLDICEQR 140 >gi|13541363|ref|NP_111051.1| Signal recognition particle GTPase [Thermoplasma volcanium GSS1] gi|14324747|dbj|BAB59674.1| signal recognition particle protein dpa [Thermoplasma volcanium GSS1] Length = 287 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 34/169 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---------EAARH 52 I F GI G GKTT I + ++L+ K V ++ A E Sbjct: 85 KKPFVIMFLGINGTGKTTTIGKVAKYLKSKGKSVVLSASDTFRAGAIEQLSMIGKEIGVE 144 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDS 111 V+ + + A + I+ A +L D R + Sbjct: 145 VIKHEKGSDPSSVAF-------------DAIQHAKARNIDYVLVD---------TAGRMN 182 Query: 112 SQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + +D +++I + PD T+++ L G + + E+ D Sbjct: 183 TNKNLMDEMKKI-KRVSNPDITLLV-LDAVAGQDSINQARTFHENVGFD 229 >gi|327183206|gb|AEA31653.1| excinuclease ABC subunit A [Lactobacillus amylovorus GRL 1118] Length = 946 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|253572795|ref|ZP_04850195.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251837695|gb|EES65786.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 265 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 13 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 66 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 67 ---HEMGLIDSSTYFKALACDHFRRMKKN------------------AYTIVKSNAVNAL 105 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 106 DDAERMIATEDVKPD-VVFFDMP 127 >gi|220903660|ref|YP_002478972.1| Cobyrinic acid ac-diamide synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867959|gb|ACL48294.1| Cobyrinic acid ac-diamide synthase [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 275 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 11/88 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GKTT + +L R + V + +A S + A Sbjct: 3 IAVSGKGGVGKTTITAWFGDYLARMGHQVWLVDADTALSLGQA------SGLDAQAMPVA 56 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILL 94 A R + V IRPA G ++L Sbjct: 57 -----LAQRPELVRERIRPAGQGGMMVL 79 >gi|116250914|ref|YP_766752.1| hypothetical protein RL1144 [Rhizobium leguminosarum bv. viciae 3841] gi|115255562|emb|CAK06641.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 169 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 64/218 (29%), Gaps = 75/218 (34%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G GKT+ + L+R+ Y V + + + A Sbjct: 8 IEGGSGTGKTS----VATELERRGYHVVH---------GDRVLAYVGDPETGQAFA---- 50 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 P +I+ + Y +D ++ I+ Sbjct: 51 ---------------GPPAGADRIV---------WGYAHW-----IWRVDKVRAIAADTT 81 Query: 129 MP------------------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 P D +LD+ V+ +R+ R + ER V+ + Sbjct: 82 HPATFFCGGSRNFHKFLDLFDKVFVLDIDVETLNRRLDGRPNEPGFEPA---ERALVLRY 138 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 R+ +L I N +D+ + SV +IL + Sbjct: 139 HHTRE-YLPIGIN-------IDTTGTVPSVVDDILAQL 168 >gi|104779581|ref|YP_606079.1| cell division protein FtsY [Pseudomonas entomophila L48] gi|95108568|emb|CAK13262.1| cell division protein FtsY [Pseudomonas entomophila L48] Length = 524 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + ++ A+ Sbjct: 325 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 380 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 381 TGADSASVIFDAVQAAKARGVDVLIAD 407 >gi|28867657|ref|NP_790276.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tomato str. DC3000] gi|28850892|gb|AAO53971.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tomato str. DC3000] gi|331014970|gb|EGH95026.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 513 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 314 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 369 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 370 TGADSASVIFDAVQAAKARGIDVLIAD 396 >gi|72161466|ref|YP_289123.1| guanylate kinase [Thermobifida fusca YX] gi|119371314|sp|Q47R17|KGUA_THEFY RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|71915198|gb|AAZ55100.1| guanylate kinase [Thermobifida fusca YX] Length = 196 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 43/209 (20%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G G GK+T + L+R V TR P + + D AE Sbjct: 17 VLSGPSGVGKSTVVKELRRRRPEVWLSVSVTTRPPRPGETDGVEYYFVDDAEFDRLVAEN 76 Query: 67 EAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E + FA R + L G+ +L + +D + A Q + Sbjct: 77 ELLEWAEFAGNRYGTPREPVLKRLAAGQPVLLE--IDLNGARQVRAN------------- 121 Query: 124 SVQEVMPD--CTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 MPD + P + ++R+ R + E + + Sbjct: 122 -----MPDAFLVFL--APPSWEELVRRLTGRGTESPEVIQRRLETARI-----------E 163 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIV 208 +A + +V++ S V +L ++ Sbjct: 164 LAAEKEFDVTLVNT--SVHEVCDELLALI 190 >gi|26991787|ref|NP_747212.1| signal recognition particle-docking protein FtsY [Pseudomonas putida KT2440] gi|24986898|gb|AAN70676.1|AE016711_4 signal recognition particle receptor FtsY [Pseudomonas putida KT2440] Length = 494 Score = 38.9 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + ++ A+ Sbjct: 297 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 352 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 353 TGADSASVIFDAVQAAKARGVDVLIAD 379 >gi|325956387|ref|YP_004291799.1| excinuclease ABC subunit A [Lactobacillus acidophilus 30SC] gi|325332952|gb|ADZ06860.1| excinuclease ABC subunit A [Lactobacillus acidophilus 30SC] Length = 946 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|320180982|gb|EFW55903.1| hypothetical protein SGB_01805 [Shigella boydii ATCC 9905] Length = 151 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 27/124 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL--------L 55 I+ G +G+GK+T L +++ VH+ G A R V+ L Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHL-----GKQAGNVGRAVVKQPLMGKSL 62 Query: 56 SCGVDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY-- 103 + ++ + A+V A AR + G I+L DR+ Sbjct: 63 NKSIERNKVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPG 122 Query: 104 AYQG 107 AY G Sbjct: 123 AYDG 126 >gi|296087318|emb|CBI33692.3| unnamed protein product [Vitis vinifera] Length = 684 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 28/145 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L R L + + R + Sbjct: 505 QKGCVIWITGLSGSGKSTLACALSRALHFRG-------NLTYVLDGDNVR----HGLNRD 553 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE R +++ + A + F DS S D+ + Sbjct: 554 LSFRAE------DRAENIRRIGEVAKL---------FSDSGIICIASLISPYRKDRDACR 598 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 + + + +D+P+++ +R Sbjct: 599 AMLSEGNF--IEVFMDIPLEVCEER 621 >gi|261856138|ref|YP_003263421.1| signal recognition particle-docking protein FtsY [Halothiobacillus neapolitanus c2] gi|261836607|gb|ACX96374.1| signal recognition particle-docking protein FtsY [Halothiobacillus neapolitanus c2] Length = 391 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I GI GAGKTT I L ++ + V + G T A A ++ ++ Sbjct: 189 IVVCGINGAGKTTTIGKLAHHYKQSGHKVMLAA--GDTFRAAAVEQLITWGERNQIPVIG 246 Query: 67 E 67 E Sbjct: 247 E 247 >gi|193213426|ref|YP_001999379.1| guanylate kinase [Chlorobaculum parvum NCIB 8327] gi|193086903|gb|ACF12179.1| Guanylate kinase [Chlorobaculum parvum NCIB 8327] Length = 197 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 66/220 (30%), Gaps = 44/220 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR------EPGGTPAAEAARHVLL 55 G I F G GK+T L+ L + V T E G R Sbjct: 10 RQGRLIVFSAPSGTGKSTVAKLVMERLGCLEFSVSATTRAMRAGEEDGVDYHFLTRERF- 68 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + E G E F + R A+ G+ LL D D L Sbjct: 69 -EQLIEEGGFIEHEFFFGNYYGTLLGKTREAVDAGRNLLFD------------LDVKGAL 115 Query: 116 FLDSLQ-EISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + E + + L P ++ +R+Q+R S A ER ++ Sbjct: 116 NLKKIFGEWA-------LLVFLK-PPSMEVLAQRLQSRKSEAPEALAMRLERAEME---- 163 Query: 173 RRQIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWE 210 L A +V D + VA+ I + + Sbjct: 164 -----LACADQFD--FVVVNDDLERTVDLVASKIAQFLPQ 196 >gi|171741871|ref|ZP_02917678.1| hypothetical protein BIFDEN_00967 [Bifidobacterium dentium ATCC 27678] gi|283456934|ref|YP_003361498.1| ABC transporter ATP-binding protein/permease [Bifidobacterium dentium Bd1] gi|306824179|ref|ZP_07457550.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|309801035|ref|ZP_07695165.1| ABC transporter, ATP-binding protein [Bifidobacterium dentium JCVIHMP022] gi|171277485|gb|EDT45146.1| hypothetical protein BIFDEN_00967 [Bifidobacterium dentium ATCC 27678] gi|283103568|gb|ADB10674.1| ATP-binding and permease protein of ABC transporter system [Bifidobacterium dentium Bd1] gi|304552567|gb|EFM40483.1| ABC superfamily ATP binding cassette transporter, membrane protein [Bifidobacterium dentium ATCC 27679] gi|308222261|gb|EFO78543.1| ABC transporter, ATP-binding protein [Bifidobacterium dentium JCVIHMP022] Length = 595 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 39/116 (33%), Gaps = 30/116 (25%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I+ G GAGKTT I+LL RF YDV E T R V L + G Sbjct: 380 GRTIALVGPTGAGKTTIINLLSRF-----YDV---AEGSVTIDGYDVRDVTLESLRRQMG 431 Query: 64 ----------------------AEAEAIVFAAARLDHVENVIRPALMEGKILLCDR 97 +A + AAAR H I ++ +R Sbjct: 432 VMLQDTFIFSGNVRDNIRYGKLDATDAEIEAAARAVHAHEFIMDLPDGYDTVVEER 487 >gi|29375651|ref|NP_814805.1| hypothetical protein EF1073 [Enterococcus faecalis V583] gi|29343112|gb|AAO80875.1| conserved hypothetical protein [Enterococcus faecalis V583] Length = 164 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT + L + L+ + + + R +L DE G Sbjct: 4 KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 53 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 97 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 98 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 127 >gi|254230125|ref|ZP_04923521.1| signal recognition particle-docking protein FtsY, putative [Vibrio sp. Ex25] gi|262392912|ref|YP_003284766.1| signal recognition particle receptor protein FtsY [Vibrio sp. Ex25] gi|151937370|gb|EDN56232.1| signal recognition particle-docking protein FtsY, putative [Vibrio sp. Ex25] gi|262336506|gb|ACY50301.1| signal recognition particle receptor protein FtsY [Vibrio sp. Ex25] Length = 407 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 210 GVNGVGKTTTIGKLAKQFQTQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 265 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 266 TGADSASVIYDAIEAAKARGVDVVIAD 292 >gi|315659098|ref|ZP_07911963.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590] gi|315495822|gb|EFU84152.1| deoxynucleoside kinase [Staphylococcus lugdunensis M23590] Length = 221 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 51/168 (30%), Gaps = 29/168 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK+T L L + + E L D+F + Sbjct: 12 ITIAGTVGVGKSTLTRALADKL-----NFKTSFENVDQNP-------YLDKFYDDFERWS 59 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAY----QGERDSSQHLFL 117 + F A R + G + DR + +A QG Sbjct: 60 FHLQIYFLAERF----KEQKRMFEYGGGFIQDRSIYEDVDIFAKMHQEQGTMSPEDFQTY 115 Query: 118 DSL-QEISV--QEVMPDCTIILDLPVDIGLKRVQNRYSLRE-SACLDY 161 L + + PD I L+ D ++R++ R E + DY Sbjct: 116 SELFNAMVMTPYFPKPDVLIYLECNYDEVIERIKQRGRDMEINTEPDY 163 >gi|312793222|ref|YP_004026145.1| guanylate kinase [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180362|gb|ADQ40532.1| guanylate kinase [Caldicellulosiruptor kristjanssonii 177R1B] Length = 199 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 50/227 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M GL I G G GK T + L + TR+P + Sbjct: 1 MREGLLIVISGPAGTGKGTVVGKLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + +A ++ ++ + AL +G ++ + QG + Sbjct: 61 EEEIKNERFLEYAEYNNNYYGTPKDFVFEALEKGFDVILE------IETQGALKIKKAFS 114 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 D +I LP + +R+ R + E E Sbjct: 115 --------------DAVLIFLLPPSIEELYRRLVKRGTESEDEIKARLE----------- 149 Query: 175 QIFLDIARNQ----PDR-CHIVDSAHSFQSVATNILNIVW-ELVQKR 215 IA+N+ P+ +++ + A I I+ E ++ R Sbjct: 150 -----IAKNEIKLVPEYDYCVIN--DNVDDAAEKIQKIIEVEKLKSR 189 >gi|301017320|ref|ZP_07182084.1| conserved hypothetical protein [Escherichia coli MS 69-1] gi|300400293|gb|EFJ83831.1| conserved hypothetical protein [Escherichia coli MS 69-1] Length = 232 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 67/246 (27%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ + +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFSR------ 181 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEIMQASLR 225 Query: 207 IVWELV 212 + + Sbjct: 226 AIHAAL 231 >gi|298674029|ref|YP_003725779.1| PilT protein domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298287017|gb|ADI72983.1| PilT protein domain protein [Methanohalobium evestigatum Z-7303] Length = 613 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 4/70 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+ G GAGK+T + + +L+ K++ V P + S ++ Sbjct: 267 QRGILIA--GPPGAGKSTFAAGIAVYLKEKDFVVKTMESPRDLQVPKEITQY--SPLDED 322 Query: 62 FGAEAEAIVF 71 A+ ++ Sbjct: 323 MANTADLLLL 332 >gi|188996471|ref|YP_001930722.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|254806783|sp|B2V895|AROK_SULSY RecName: Full=Shikimate kinase; Short=SK gi|188931538|gb|ACD66168.1| Shikimate kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 166 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 25/198 (12%), Positives = 57/198 (28%), Gaps = 44/198 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK+T +L L K D+ E + + G F Sbjct: 11 GSGKSTVGKILAEKLNMKFVDIDKLIE---EKEGMKIKDIFEQKGESYF----------- 56 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 + I + + +++ L+++ + D Sbjct: 57 --RELERKQIEAIVNQEGLVVST-------------GGGLGANLNNMNLMKKNG---D-V 97 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 + LD+ ++ L R++N E+ + E R+ +A +++ Sbjct: 98 VWLDVSLNTVLDRLKNDQDRPLLKQP--IEKIKQLFEE--RKNVYRLAN------IRINA 147 Query: 194 A-HSFQSVATNILNIVWE 210 + + IL + Sbjct: 148 DKKTPSQIVEEILTKIKR 165 >gi|34535132|dbj|BAC87217.1| unnamed protein product [Homo sapiens] Length = 303 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 2/32 (6%) Query: 1 MNSGLF--ISFEGIEGAGKTTHISLLKRFLQR 30 + G F ++ EG++ GKTT + L+ Sbjct: 247 IQKGKFQVVAIEGLDATGKTTVTQSVADSLKA 278 >gi|121605261|ref|YP_982590.1| ABC transporter-like protein [Polaromonas naphthalenivorans CJ2] gi|120594230|gb|ABM37669.1| ABC transporter related protein [Polaromonas naphthalenivorans CJ2] Length = 255 Score = 38.9 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 3/106 (2%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEAI 69 G GAGK+T + L L + + + AR + L Sbjct: 38 GPNGAGKSTLLKALAGLLPHSGTVALLGQPMAKMRGRDRARQLSWLGQNESSADDLTAYD 97 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 V RL H + P+ + + +R L ++ A+ L Sbjct: 98 VAMLGRLPHQAWLAPPSAADHAAV--ERALRATQAWDWRGRPLGQL 141 >gi|325145480|gb|EGC67754.1| signal recognition particle-docking protein FtsY [Neisseria meningitidis M01-240013] Length = 421 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAHGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|330841418|ref|XP_003292695.1| hypothetical protein DICPUDRAFT_40956 [Dictyostelium purpureum] gi|325077039|gb|EGC30779.1| hypothetical protein DICPUDRAFT_40956 [Dictyostelium purpureum] Length = 230 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 28/158 (17%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 GL ++ G G+GK T LK +Y+V + R V S E G Sbjct: 14 GLRLTIIGAPGSGKGTQSEKLK-----NDYNV------QPISTGQILREV--SQEDSELG 60 Query: 64 AEAEAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + A + D + N+I AL + S++ G + + + L Sbjct: 61 RSISSKLAAGELISNDIMLNIIEKALDDK----------SNWLLDGYPRNPEQA--EHLD 108 Query: 122 EISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESAC 158 ++ +P + LD+P D+ +RVQ+R+ S Sbjct: 109 RFLTKKNIPLSLVLYLDVPEDVLAERVQDRWVHPGSGR 146 >gi|315037914|ref|YP_004031482.1| excinuclease ABC, A subunit [Lactobacillus amylovorus GRL 1112] gi|312276047|gb|ADQ58687.1| excinuclease ABC, A subunit [Lactobacillus amylovorus GRL 1112] Length = 946 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|229197123|ref|ZP_04323859.1| hypothetical protein bcere0001_26740 [Bacillus cereus m1293] gi|228586348|gb|EEK44430.1| hypothetical protein bcere0001_26740 [Bacillus cereus m1293] Length = 282 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNA-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|219118280|ref|XP_002179918.1| kinase adenylate kinase [Phaeodactylum tricornutum CCAP 1055/1] gi|217408971|gb|EEC48904.1| kinase adenylate kinase [Phaeodactylum tricornutum CCAP 1055/1] Length = 316 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 21/105 (20%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACL--------------DYFERKDVMIHEKRR---QI 176 I L++P + ++RV R + ++ + ++ +K + + Sbjct: 211 IFLNVPDSVLVERVVGRRTDPDTGKIYHMTFSPPEDEEIKARLVQRSDDTEQKVKVRLEQ 270 Query: 177 FLDIARNQPDRC----HIVDSAHSFQSVATNILNIVWELVQKRVS 217 F D D+ VD + V+ IL + E V +V Sbjct: 271 FHDNVDAVKDKYTNIMVTVDGNQAPTQVSKEILEAIEEKVGSKVG 315 >gi|157412523|ref|YP_001483389.1| adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9215] gi|157387098|gb|ABV49803.1| Adenylylsulfate kinase [Prochlorococcus marinus str. MIT 9215] Length = 212 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 7/53 (13%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 + G+ I F G+ G+GK+T + L L H+ R + RH L Sbjct: 34 HKGMVIWFTGLSGSGKSTLANALNEVL-------HLERFSTYVLDGDNIRHGL 79 >gi|24114293|ref|NP_708803.1| hypothetical protein SF3032 [Shigella flexneri 2a str. 301] gi|30064340|ref|NP_838511.1| hypothetical protein S3233 [Shigella flexneri 2a str. 2457T] gi|24053449|gb|AAN44510.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042597|gb|AAP18321.1| hypothetical protein S3233 [Shigella flexneri 2a str. 2457T] gi|281602376|gb|ADA75360.1| putative ATP-binding protein yghS [Shigella flexneri 2002017] Length = 237 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGCYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + + G +++ + R ++ + +G +L+ DR+ Sbjct: 77 KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126 >gi|305665164|ref|YP_003861451.1| adenylate kinase [Maribacter sp. HTCC2170] gi|88709916|gb|EAR02148.1| adenylate kinase [Maribacter sp. HTCC2170] Length = 368 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 40/209 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK T LK K+ + R+ + + A++ Sbjct: 189 GAGKGTQAEFLKDKYNLKHI-----------STGDVFRYNIKNGTELGVLAKS-----YM 232 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQHLFLDSLQEI-SVQEVMPD 131 + D V + + +++ ++ ++ D S + + G + ++L +E+ D Sbjct: 233 DQGDLVPDEVTIKMLQDEV---EKNPDASGFIFDGFPRTVAQA--EALDRFLVSKEMKID 287 Query: 132 CTIILDLPVDIGLKRVQNRY-------SLRESACLDYFERKDVMIHEKRR--QIFLDIAR 182 T+ LD ++ ++R+ R ES + FE ++K Q++ + Sbjct: 288 ATLALDADDEVLIQRLLERGKVSGRSDDQDESKIRNRFE----EYNQKTAPLQVYYEAQ- 342 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + H V+ + + + + ++ EL Sbjct: 343 ---GKYHAVNGIGAIEDITRRLGKVIEEL 368 >gi|324500315|gb|ADY40152.1| Replication factor C subunit 2 [Ascaris suum] Length = 364 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 10/96 (10%) Query: 4 GLF--------ISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G+F I G G GKTT I L L + + + + R+ + Sbjct: 71 GMFAKQGNLPNIVISGPPGCGKTTSIWALARELLGTQIREACLELNASDDRGIDVVRNKI 130 Query: 55 LSCGVDEFG-AEAEAIVFAAARLDHVENVIRPALME 89 S + E + D + + AL Sbjct: 131 KSFAQTKVSLPEGRHKIIILDEADSMTEGAQQALRR 166 >gi|256811076|ref|YP_003128445.1| daunorubicin resistance ABC transporter ATPase subunit [Methanocaldococcus fervens AG86] gi|256794276|gb|ACV24945.1| daunorubicin resistance ABC transporter ATPase subunit [Methanocaldococcus fervens AG86] Length = 328 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 35/229 (15%), Positives = 69/229 (30%), Gaps = 47/229 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVL 54 G +F G GAGK+T I+++ L+ YDV + Sbjct: 28 KKGEIFAFLGPNGAGKSTTINMITTLLKPTSGTIKVAGYDVVKNPNEVRKRIGIVFQDTT 87 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM-------EGKILLCDRFLDSSYAYQG 107 L + + R + ++ I L +I+ Y Sbjct: 88 LDRELTAYENLYIHGKIYGYRGEELKKRIEEMLEFVELKEHAHRIV----------KYFS 137 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLK---RVQNRYSLRESACLDYFER 164 + +L P+ + LD +GL R ++E E Sbjct: 138 GGMVRRLEIARALIH------KPEI-LFLD-EPTVGLDPQTRAHIWDYIKEMK-----EE 184 Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATNILNIV 208 ++ I +++ A + DR I+D + + + + I + + Sbjct: 185 YNMTIFLTTH--YMEEAESLADRIAIIDNGKIIAMGTVDELKSIIGDDI 231 >gi|229258556|gb|ACQ45583.1| cell division protein FtsY [Vesicomya gigas gill symbiont] Length = 194 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + Q + V + G T A A + + + A+ + Sbjct: 45 GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVIAKTL- 101 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + + A + ILL D Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILLAD 127 >gi|170738682|ref|YP_001767337.1| adenylate kinase [Methylobacterium sp. 4-46] gi|168192956|gb|ACA14903.1| adenylate kinase [Methylobacterium sp. 4-46] Length = 199 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 67/215 (31%), Gaps = 33/215 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I G GAGK T + + Q D+ GTP A+ ++ S G Sbjct: 3 IILLGPPGAGKGTQSARIVERFGIPQLSTGDMLRAAVAAGTPVGLQAKSIMESGG---LV 59 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + I R++ P +G + D F R +Q LD+L + Sbjct: 60 PDEVVIGIVGDRIE------EPDARKGF--ILDGF---------PRTVAQAKALDAL--L 100 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRRQIFLDIAR 182 + + + D I + + R+ NR + + + + + + + Sbjct: 101 AGKGLRLDAVIEFKVDEAALVGRIANRAAETLARGEVVRKDDTPEVFKTRL-DAYRSLTA 159 Query: 183 NQPDRC------HIVDSAHSFQSVATNILNIVWEL 211 + +D V+ I ++ L Sbjct: 160 PLSEYYAGTGLLRPIDGMAPIDQVSREIEALLGGL 194 >gi|83814525|ref|YP_444724.1| sulfate adenylyltransferase large subunit [Salinibacter ruber DSM 13855] gi|83755919|gb|ABC44032.1| sulfate adenylyltransferase, large subunit subfamily, putative [Salinibacter ruber DSM 13855] Length = 639 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 69/203 (33%), Gaps = 43/203 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T ++ L + ++L G + Sbjct: 471 GLSGAGKSTIAKAVEERLFDADVQT-----------------MMLDGDNVRHGLSGDLGF 513 Query: 71 FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A R + V V R +G + LC S YQ +RD ++ L + +++ ++ Sbjct: 514 TPADRTENIRRVSEVARLFFEQGNVTLC--SFVSP--YQEDRDRARELLPEDVRDRFLEV 569 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDR 187 + D P+++ +R + E ++ + A PD Sbjct: 570 HV-------DCPLEVCKER-------DTKGLYEKAEAGEITNFTGVSAPYE--APEDPD- 612 Query: 188 CHIVDSAH-SFQSVATNILNIVW 209 +V++ ++ A I+ + Sbjct: 613 -VVVNTDEMGVEACADQIVEALE 634 >gi|70733142|ref|YP_262915.1| signal recognition particle-docking protein FtsY [Pseudomonas fluorescens Pf-5] gi|68347441|gb|AAY95047.1| signal recognition particle-docking protein FtsY [Pseudomonas fluorescens Pf-5] Length = 497 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + ++ A+ Sbjct: 298 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 353 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 354 TGADSASVIFDAVQAAKARGIDVLIAD 380 >gi|50292329|ref|XP_448597.1| hypothetical protein [Candida glabrata CBS 138] gi|49527909|emb|CAG61560.1| unnamed protein product [Candida glabrata] Length = 315 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 28/82 (34%), Gaps = 11/82 (13%) Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74 +GK+T L +L+ K +V V + R + E E + +A Sbjct: 12 SGKSTVARELAGYLREKGANVVVHSDETLGHKGRETREEDYNDTHAERKLRNE--IMSAV 69 Query: 75 RLDHVENVIRPALMEGKILLCD 96 R D L I++ D Sbjct: 70 RRD---------LSRSTIVIVD 82 >gi|260062570|ref|YP_003195650.1| adenylylsulfate kinase [Robiginitalea biformata HTCC2501] gi|88784137|gb|EAR15307.1| adenylylsulfate kinase [Robiginitalea biformata HTCC2501] Length = 198 Score = 38.9 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 22/36 (61%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 ++ L I F G+ G+GK+T + L++ L + Y +V Sbjct: 23 HNSLLIFFTGLSGSGKSTLANGLEQRLFEEGYKTYV 58 >gi|326388218|ref|ZP_08209821.1| adenylate kinase [Novosphingobium nitrogenifigens DSM 19370] gi|326207384|gb|EGD58198.1| adenylate kinase [Novosphingobium nitrogenifigens DSM 19370] Length = 214 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 42/238 (17%), Positives = 69/238 (28%), Gaps = 63/238 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T L R T + R + + A+A Sbjct: 3 IILLGPPGAGKGTQSQRLVE---RHGLKQLST--------GDMLRAAVKAGTPVGLKAKA 51 Query: 67 EAIVFAAARLDHVENVIRPAL--------MEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + V + I AL G+ + D + R ++Q LD Sbjct: 52 -----VMDAGELVSDEIVSALIGDELDVMGPGQGAIFDGY---------PRTAAQAESLD 97 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR--ESACLDYFER----------KD 166 + ++ + D I LD+ D ++R+ RY+ D FE+ Sbjct: 98 GI--LASRGRKLDHVIELDVDEDALVERITGRYTCATCGKGYHDTFEKPAVEGTCDKCGG 155 Query: 167 VMIHEK-------RRQIFLD-IARNQP------DRCHI--VDSAHSFQSVATNILNIV 208 + R + A+ P R + VD V I ++ Sbjct: 156 HEFKRRPDDNEETVRTRMAEYRAKTAPILPIYEARGIVAHVDGMAQMDDVTAAIEAVI 213 >gi|225705042|gb|ACO08367.1| NADH dehydrogenase 1 alpha subcomplex subunit 10, mitochondrial precursor [Oncorhynchus mykiss] Length = 351 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 69/223 (30%), Gaps = 28/223 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAE----AARHV 53 IS +G +GK L L +Y +T E P A + Sbjct: 58 KIISIDGNLASGKGALAKSLADKLGMLYMPEPNTHYLDKMTAEKEPLPIAFNGNCSLEKF 117 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY------QG 107 + + RL + + L G+ ++ +R S + QG Sbjct: 118 YADPKAADGNSYRLQAWMYLMRLLQWSDAMEHLLTTGQGVILERSPYSDMVFVEAMFKQG 177 Query: 108 ERDSSQHLFLDSLQEISV-QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + ++ IS+ + + P I +D P + K+++ L E Sbjct: 178 YIRRQCVDHYNEIKGISICEFLPPHLVIYVDKPAEEVQKKLKASGKDVPLPYLKSIE--- 234 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSA--HSFQSVATNILNI 207 ++K +L + D+ + +A +I ++ Sbjct: 235 -DAYKKT---YLPKISENAE-LLAYDATQAQDMERIAEDIEDL 272 >gi|213402547|ref|XP_002172046.1| uridylate kinase [Schizosaccharomyces japonicus yFS275] gi|212000093|gb|EEB05753.1| uridylate kinase [Schizosaccharomyces japonicus yFS275] Length = 208 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 46/215 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G GAGK T S L + + + +RE G+ + R + + Sbjct: 25 GGPGAGKGTQCSRLVKKYKLAHISAGDCLREEQSRE--GSKYGDLIRTYIKEGQIVPKEI 82 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + + E ++ EG L D F YQ +E+ Sbjct: 83 TIKLL----------EQKMKDYSAEGIDTFLIDGFPRKLDQYQAF------------EEM 120 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI--- 180 + T+ + L R+ NR E + +KR +++ Sbjct: 121 VCPALT---TLFFQCGQETMLARLLNRGKTSGR------EDDNTESIKKRFVTYVETSMP 171 Query: 181 ---ARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 A + RC +++ + +V + + + + Sbjct: 172 VIDAMKERGRCVTINAENDPDTVFEDTCAAMNKAL 206 >gi|158521993|ref|YP_001529863.1| cytidylate kinase [Desulfococcus oleovorans Hxd3] gi|158510819|gb|ABW67786.1| cytidylate kinase [Desulfococcus oleovorans Hxd3] Length = 222 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 50/215 (23%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 L I+ +G GAGKTT L R L Y T R V L+ Sbjct: 2 KPLLITIDGPAGAGKTTVSKALARCL---GYRYVDT--------GALYRGVALAAKEKGV 50 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDS 119 E + L+ + +R RF+ D S + G+RD S + Sbjct: 51 APEDD------DGLERLCTGLRL-----------RFVVNEDGSRLFDGDRDISGLIRTSE 93 Query: 120 LQEISVQ-EVMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFERK-----DVMIHE 171 + ++ P + DL +G + + R+ + + E + D + E Sbjct: 94 ISMLASAVSARP-VVRKFLFDLQRRLGEE-KNAVFEGRDMGTVVFPEAEVKFFLDASVEE 151 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILN 206 + R+ + + + ++ + + +A I Sbjct: 152 RARRRYDERSADE---------TRTLEQIAEEIRT 177 >gi|109111807|ref|XP_001099319.1| PREDICTED: nicotinamide riboside kinase 1 isoform 3 [Macaca mulatta] gi|109111809|ref|XP_001099414.1| PREDICTED: nicotinamide riboside kinase 1 isoform 4 [Macaca mulatta] Length = 199 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 39/231 (16%), Positives = 75/231 (32%), Gaps = 55/231 (23%) Query: 1 MNSGLFISFEGIEGA---GKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARH 52 M + FI GI G GKTT L++ L ++ E Sbjct: 1 MKT--FIV--GISGVTNGGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYD 56 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 VL + +++ + + +A R ++ DR +S+ Sbjct: 57 VLEALNMEKMMSTISCWMESARRS---------------VVSTDR------------ESA 89 Query: 113 QHLFLDSLQEISVQEVMP-DCTII-----LDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + + + ++ + P D TI L +P + +R R YF+ Sbjct: 90 EEIPILIIEGFLLFNYKPLD-TIWNRSYFLTIPYEECKRRRSTRV-YEPPDSPGYFDGHV 147 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIV--DSAHSFQSVATNILNIVWELVQKR 215 ++ K RQ DI +V D S + + + + + + K+ Sbjct: 148 WPMYLKHRQEMQDI------TWEVVYLDGTKSEEDLFLQVYEDLIQELAKQ 192 >gi|33865951|ref|NP_897510.1| ABC transporter, nitrate-like, ATP binding component [Synechococcus sp. WH 8102] gi|33633121|emb|CAE07932.1| ABC transporter, nitrate-like, ATP binding component [Synechococcus sp. WH 8102] Length = 251 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 16/25 (64%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 M SG FI+F G G GK+T + L+ Sbjct: 25 MQSGEFITFVGSSGCGKSTLLRLIA 49 >gi|229258554|gb|ACQ45582.1| cell division protein FtsY [Calyptogena kilmeri gill symbiont] Length = 194 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + Q + V + G T A A + + + A+ + Sbjct: 45 GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVVAKTL- 101 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + + A + ILL D Sbjct: 102 -GADTASVIFDAYQSAQAKNIDILLAD 127 >gi|170289124|ref|YP_001739362.1| cytidylate kinase [Thermotoga sp. RQ2] gi|281412787|ref|YP_003346866.1| cytidylate kinase [Thermotoga naphthophila RKU-10] gi|238688850|sp|B1LBI1|KCY_THESQ RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|170176627|gb|ACB09679.1| cytidylate kinase [Thermotoga sp. RQ2] gi|281373890|gb|ADA67452.1| cytidylate kinase [Thermotoga naphthophila RKU-10] Length = 220 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 42/240 (17%), Positives = 82/240 (34%), Gaps = 58/240 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAA--EAARHVLLS 56 I+ +G +GK+T LL L + + E G +P++ E + L + Sbjct: 5 IAIDGPAASGKSTVARLLAEKLGFDHLNTGATYRAVAVYLHEKGLSPSSAEEEIENALKN 64 Query: 57 CGVDEF----------------GAEAEAIVFAAARLD----HVENVIRPALMEGKILLCD 96 +D EA + ARL+ H+ + R + I++ Sbjct: 65 LKIDYVNGRVYINGKDYTEKIQSPEAGVLASNFARLEVVRRHLVRIQREICDDKNIVV-- 122 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE- 155 E + L + I L ++ ++R Y R Sbjct: 123 -----------EGRDIGTVVLPNAH----------LKIFLTASLEARVERKLKEYQKRGL 161 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVDS-AHSFQSVATNILNIVWELVQ 213 + ER+ + E+ + ++A +P + I+D+ + S + V IL +V E + Sbjct: 162 KVTKEEVERELISRDEQDSK--RNVAPLKPAEDAVIIDTTSMSVEEVLDRILKLVRERMN 219 >gi|158316927|ref|YP_001509435.1| adenylylsulfate kinase [Frankia sp. EAN1pec] gi|158112332|gb|ABW14529.1| adenylylsulfate kinase [Frankia sp. EAN1pec] Length = 606 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 GL I F G+ G+GK+T LL L + V + Sbjct: 424 QRGLTILFTGLSGSGKSTLAGLLVCRLLERGRRVTL 459 >gi|120405375|ref|YP_955204.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium vanbaalenii PYR-1] gi|119958193|gb|ABM15198.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Mycobacterium vanbaalenii PYR-1] Length = 618 Score = 38.9 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 35/97 (36%), Gaps = 20/97 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G + F G+ G+GK++ L+++ L K + +L Sbjct: 443 LTKGRTVWFTGLSGSGKSSVAMLVEQKLLEKGIPAY-----------------VLDGDNL 485 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPA---LMEGKILL 94 G ++ A R ++ + A G+++L Sbjct: 486 RHGLNSDLGFSMADRAENQRRLAYVASILADSGQVVL 522 >gi|307330504|ref|ZP_07609646.1| daunorubicin resistance ABC transporter ATPase subunit [Streptomyces violaceusniger Tu 4113] gi|306883839|gb|EFN14883.1| daunorubicin resistance ABC transporter ATPase subunit [Streptomyces violaceusniger Tu 4113] Length = 333 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 62/208 (29%), Gaps = 32/208 (15%) Query: 11 GIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G GAGKTT + +L + +DV + E + L D Sbjct: 51 GPNGAGKTTTVRILSTLIAADGGQAQVAGHDVATSPEGVRAAIGVTGQFAALD---DLLT 107 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY--QGERDSSQHLFLDSLQ 121 AE ++ D + R K L +RF + A+ LD L Sbjct: 108 AEENVLLM----ADLLRLGKREGRRRAKE-LLERFDIADVAHKRAAFFSGGMRRRLD-LA 161 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 V + I LD GL R L V + + +L+ A Sbjct: 162 MTLVGDPQ---VIFLD-EPTTGLDPRSRRTMWETVRSL---VASGVTVFLTTQ--YLEEA 212 Query: 182 RNQPDRCHIVD-----SAHSFQSVATNI 204 DR ++D + + + I Sbjct: 213 DQLADRIAVLDGGRIVAEGTADELKAQI 240 >gi|317054761|ref|YP_004103228.1| uridine kinase [Ruminococcus albus 7] gi|315447030|gb|ADU20594.1| uridine kinase [Ruminococcus albus 7] Length = 177 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-IARNQPDRCH 189 DC I +D P+DI + R R + A D + R ++ + P+ + Sbjct: 98 DCCIFIDTPLDIAMARRVLR--DMKEASADEIRNEMNTYLNAARVCYVQMLTEILPNSDY 155 Query: 190 IVDSAHSFQSVATNILNIVWE 210 ++D A+ +++ + I+ Sbjct: 156 VIDGANDLETIINEAMEIILR 176 >gi|218701760|ref|YP_002409389.1| hypothetical protein ECIAI39_3480 [Escherichia coli IAI39] gi|301019935|ref|ZP_07184070.1| conserved hypothetical protein [Escherichia coli MS 196-1] gi|218371746|emb|CAR19597.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli IAI39] gi|299882033|gb|EFI90244.1| conserved hypothetical protein [Escherichia coli MS 196-1] Length = 237 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ + +G +L+ DR+ Sbjct: 77 KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 135 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 136 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 186 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 187 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 230 Query: 207 IVWELV 212 + + Sbjct: 231 AIHAAL 236 >gi|213967799|ref|ZP_03395946.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tomato T1] gi|301382436|ref|ZP_07230854.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tomato Max13] gi|302061172|ref|ZP_07252713.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tomato K40] gi|302132035|ref|ZP_07258025.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213927575|gb|EEB61123.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. tomato T1] Length = 513 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 314 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 369 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 370 TGADSASVIFDAVQAAKARGIDVLIAD 396 >gi|229918063|ref|YP_002886709.1| uridine kinase [Exiguobacterium sp. AT1b] gi|229469492|gb|ACQ71264.1| uridine kinase [Exiguobacterium sp. AT1b] Length = 196 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 59/174 (33%), Gaps = 31/174 (17%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N ++ +G+ GAGKTT +S L + ++ Sbjct: 17 NRPFVVAIDGLSGAGKTTLVSYL---------------NNDPSIYVLHIDDYIVERDRRY 61 Query: 62 FGAEAEAIVFAAARLD--HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E+ + A + D +E + L G +L Y Y+ + + + + + Sbjct: 62 QTGQLESTEYYALQWDVSRLERELFRPLRNGITVL----TLPRYVYERDVIAEEIVDISC 117 Query: 120 LQEISVQEV---MP------DCTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 + V+ + P D I LD P + +RV NR + E+ Sbjct: 118 AHTVVVEGIFLQRPEWRSYFDYVIYLDCPRKVRYERVLNRDTYLGDPTA-RLEK 170 >gi|118475352|ref|YP_891968.1| molybdopterin-guanine dinucleotide biosynthesis protein B [Campylobacter fetus subsp. fetus 82-40] gi|118414578|gb|ABK82998.1| molybdopterin-guanine dinucleotide biosynthesis protein B [Campylobacter fetus subsp. fetus 82-40] Length = 183 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTR-EPGG 43 G+GKTT I+ + L + Y V +T+ +PG Sbjct: 8 GSGKTTLIAKIASKLIEQGYKVAITKHDPGD 38 >gi|76800754|ref|YP_325762.1| ATPase [Natronomonas pharaonis DSM 2160] gi|76556619|emb|CAI48190.1| predicted ATPase [Natronomonas pharaonis DSM 2160] Length = 617 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 2/49 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 G+ IS G GAGK+T + FL + V +P Sbjct: 258 QRGVLIS--GAPGAGKSTFAQAVAEFLDDSGFAVKTMEKPRDLQVGPEI 304 >gi|332088358|gb|EGI93477.1| hypothetical protein SD15574_3332 [Shigella dysenteriae 155-74] Length = 151 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 27/124 (21%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVL--------L 55 I+ G +G+GK+T L +++ VH+ G A R V+ L Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHL-----GKQAGNVGRAVVKLPLMGKSL 62 Query: 56 SCGVDEFGAEAE--------AIVFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSY-- 103 + ++ + A+V A AR + G I+L DR+ Sbjct: 63 NKSIERNKVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPG 122 Query: 104 AYQG 107 AY G Sbjct: 123 AYDG 126 >gi|330898961|gb|EGH30380.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. japonica str. M301072PT] Length = 494 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + + A+ Sbjct: 295 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 350 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 351 TGADSASVIFDAVQAAKARGIDVLIAD 377 >gi|322712148|gb|EFZ03721.1| signal sequence receptor alpha subunit [Metarhizium anisopliae ARSEF 23] Length = 655 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 20/136 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65 IS G+ G GK+T++S + FL + Y V + G T + A + + E A Sbjct: 446 ISIVGVNGVGKSTNLSKICFFLLQNKYKVLIAA--GDTFRSGAVEQLAVHVRNLKELTAR 503 Query: 66 A----EAIV--FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + ++ + A EG ++L D R + + Sbjct: 504 EGGQVELYQKGYGKDAATVAKDAVSHAAQEGFDVVLID---------TAGRRHNDQRLMS 554 Query: 119 SLQEISVQEVMPDCTI 134 SL++ + PD + Sbjct: 555 SLEKFAKFA-QPDKIL 569 >gi|308183954|ref|YP_003928087.1| shikimate kinase [Helicobacter pylori SJM180] gi|308059874|gb|ADO01770.1| shikimate kinase [Helicobacter pylori SJM180] Length = 162 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ L L+ +V T + R + G D F +F Sbjct: 11 GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 +D ++ + P ++ + ++L+ + T Sbjct: 62 NLIDELKTLKTP------HVIST--------------GGGIVMHENLKGLGT-------T 94 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 L + + +KR+ + + D + K++ EKR+ ++ A I+D+ Sbjct: 95 FYLKIDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146 Query: 194 AHSFQSVATNILNIV 208 + +L + Sbjct: 147 RGGLNNSLKQVLQFI 161 >gi|255654518|ref|ZP_05399927.1| putative lantibiotic ABC transporter,ATP-binding protein [Clostridium difficile QCD-23m63] gi|296449244|ref|ZP_06891030.1| mutacin ABC superfamily ATP binding cassette transporter, ABC protein [Clostridium difficile NAP08] gi|296880781|ref|ZP_06904730.1| ABC superfamily ATP binding cassette transporter,ABC protein [Clostridium difficile NAP07] gi|296261913|gb|EFH08722.1| mutacin ABC superfamily ATP binding cassette transporter, ABC protein [Clostridium difficile NAP08] gi|296428228|gb|EFH14126.1| ABC superfamily ATP binding cassette transporter,ABC protein [Clostridium difficile NAP07] Length = 234 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 26/60 (43%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK+T + +L L+ + + R+P + E ++ S + E ++ Sbjct: 38 GPNGAGKSTTLKMLVGLLRPTDGRIIFDRKPWKRESLEKIGSLIESPALYGNLTAEENLL 97 >gi|222480225|ref|YP_002566462.1| cytidylate kinase [Halorubrum lacusprofundi ATCC 49239] gi|254807702|sp|B9LPV4|KCY_HALLT RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|222453127|gb|ACM57392.1| cytidylate kinase [Halorubrum lacusprofundi ATCC 49239] Length = 192 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 60/207 (28%), Gaps = 52/207 (25%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ G G+GK+T+ + L L D + R Sbjct: 1 MLITVSGPPGSGKSTNAAGLADRL---GLDHV--------SGGDIFRE------------ 37 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 AA R A + +I DR LD ++ + L Sbjct: 38 ------MAAERDMTPVEFNEFAEEDPQI---DRDLDRRL-HEIATTRDDLVLESRLAGWL 87 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF------L 178 + D D PV +R+ R ER++ ++ R+ + L Sbjct: 88 SADHA-DFRFWFDAPVSTRAERIAEREEKPVDRAKAETERREASEKKRYREYYDIDIGDL 146 Query: 179 DI-------ARNQPDRCH-----IVDS 193 I AR P+R +D+ Sbjct: 147 SIYDAAYNTARWGPERFIDVLVATIDA 173 >gi|219851207|ref|YP_002465639.1| signal recognition particle-docking protein FtsY [Methanosphaerula palustris E1-9c] gi|219545466|gb|ACL15916.1| signal recognition particle-docking protein FtsY [Methanosphaerula palustris E1-9c] Length = 409 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 27/138 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-------V 59 I F G+ G GKTT ++ + FL + + V + G T A A + + Sbjct: 214 ILFTGVNGTGKTTTVAKVGAFLLKNGFSVVI--GAGDTFRAGAIEQIDIHAERLGIKVIQ 271 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + G + A++F D V+ I + ++L D R ++ ++ Sbjct: 272 HQQGGDPSAVLF-----DTVQYAISHQI---DVVLAD---------TAGRFHNRANLMNQ 314 Query: 120 LQEISVQEVMPDCTIILD 137 L + + + PD + +D Sbjct: 315 LAK-VKRVMKPDLVVYVD 331 >gi|52424867|ref|YP_088004.1| putrescine/spermidine ABC transporter ATPase protein [Mannheimia succiniciproducens MBEL55E] gi|81825558|sp|Q65UE1|POTA_MANSM RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|52306919|gb|AAU37419.1| MalK protein [Mannheimia succiniciproducens MBEL55E] Length = 373 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 +N+G F++ G G GKTT + L+ F + + + E Sbjct: 33 INNGEFLTILGPSGCGKTTVLRLIAGFEEANGGQIILDGE 72 >gi|1709326|sp|P52978|NODQ_RHITR RecName: Full=Bifunctional enzyme nodQ; AltName: Full=Nodulation protein Q; Includes: RecName: Full=Sulfate adenylyltransferase subunit 1; AltName: Full=ATP-sulfurylase large subunit; AltName: Full=Sulfate adenylate transferase; Short=SAT; Includes: RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase gi|1107853|emb|CAA60914.1| NodQ protein [Rhizobium tropici CIAT 899] gi|1280529|gb|AAB08984.1| NodQ [Rhizobium tropici] Length = 632 Score = 38.5 bits (89), Expect = 0.62, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 29/88 (32%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L+ L + LL G + Sbjct: 466 GLSGSGKSTIANALEALLHTCGKHTY-----------------LLDGDNVRHGLNRDLGF 508 Query: 71 FAAARLD---HVENVIRPALMEGKILLC 95 A R++ V V + G I++C Sbjct: 509 TAVDRVENIRRVAEVAKLMADAGLIVIC 536 >gi|325275629|ref|ZP_08141529.1| signal recognition particle-docking protein FtsY [Pseudomonas sp. TJI-51] gi|324099236|gb|EGB97182.1| signal recognition particle-docking protein FtsY [Pseudomonas sp. TJI-51] Length = 329 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ++ V + G T A A + + ++ A+ Sbjct: 132 GVNGAGKTTTIGKLAKKLQQEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 187 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 188 TGADSASVIFDAVQAAKARGVDVLIAD 214 >gi|302035805|ref|YP_003796127.1| cytidylate kinase [Candidatus Nitrospira defluvii] gi|300603869|emb|CBK40201.1| Cytidylate kinase [Candidatus Nitrospira defluvii] Length = 232 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 GL I+ +G G GK+T LL L Sbjct: 11 KRGLIIAIDGPAGVGKSTVARLLALRL 37 >gi|254519749|ref|ZP_05131805.1| deoxyadenosine kinase [Clostridium sp. 7_2_43FAA] gi|226913498|gb|EEH98699.1| deoxyadenosine kinase [Clostridium sp. 7_2_43FAA] Length = 220 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 31/234 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ G GK++ +L + P + S +E + Sbjct: 2 IVVGGMIGLGKSSVAEILGEHFKSD----VFYESVDDNPILP----LFYSESEEEIQKKR 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYA--YQGERDSSQHLF------ 116 + L+ I+ AL+ +L DR + D +A + Sbjct: 54 YPFLLQLYFLNTRFKSIKEALVHNNNVL-DRSIYEDWYFAKKNMELGRINDLEMKIYEDL 112 Query: 117 ----LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L+ L+E+ + PD + L + L R+ R E +D ++ K Sbjct: 113 LHNMLEELEELPKKA--PDVMVYLKGSFETVLSRIALRGREFE---IDESLKEYYHFLWK 167 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNI-LNIVWELVQKRVSPLSSKKDI 225 +++ + I+D + V + ELV++++ + + ++I Sbjct: 168 DYDAWVENCYKASE-VLIID-MDNMDVVNNEADKEKLIELVEEKLREVRAIEEI 219 >gi|7387810|sp|Q12657|KAPS_PENCH RecName: Full=Adenylyl-sulfate kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase; Short=APS kinase gi|7245663|pdb|1D6J|A Chain A, Crystal Structure Of Adenosine 5'-Phosphosulfate (Aps) Kinase From Penicillium Chrysogenum gi|7245664|pdb|1D6J|B Chain B, Crystal Structure Of Adenosine 5'-Phosphosulfate (Aps) Kinase From Penicillium Chrysogenum gi|27065600|pdb|1M7G|A Chain A, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Aps gi|27065601|pdb|1M7G|B Chain B, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Aps gi|27065602|pdb|1M7G|C Chain C, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Aps gi|27065603|pdb|1M7G|D Chain D, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Aps gi|27065605|pdb|1M7H|A Chain A, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Structure With Aps Soaked Out Of One Dimer gi|27065606|pdb|1M7H|B Chain B, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Structure With Aps Soaked Out Of One Dimer gi|27065607|pdb|1M7H|C Chain C, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Structure With Aps Soaked Out Of One Dimer gi|27065608|pdb|1M7H|D Chain D, Crystal Structure Of Aps Kinase From Penicillium Chrysogenum: Structure With Aps Soaked Out Of One Dimer gi|1066330|gb|AAA81521.1| adenosine-5'phosphosulfate kinase [Penicillium chrysogenum] Length = 211 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 31/151 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G+ +GK+T L+ L ++ VH R L Sbjct: 23 QRGLTIWLTGLSASGKSTLAVELEHQLV-RDRRVHAYR---------------LDGDNIR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118 FG + A R +++ + A + F DS S A Sbjct: 67 FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNSIAITSFISPYRKDRDTAR 117 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKR 146 L E++ +P + +D+PV++ +R Sbjct: 118 QLHEVATPGEETGLPFVEVYVDVPVEVAEQR 148 >gi|255525657|ref|ZP_05392590.1| Guanylate kinase [Clostridium carboxidivorans P7] gi|296185417|ref|ZP_06853827.1| guanylate kinase [Clostridium carboxidivorans P7] gi|255510643|gb|EET86950.1| Guanylate kinase [Clostridium carboxidivorans P7] gi|296050251|gb|EFG89675.1| guanylate kinase [Clostridium carboxidivorans P7] Length = 209 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 77/225 (34%), Gaps = 50/225 (22%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLS 56 M GL + G GAGK T L L++ ++ TR P + + LS Sbjct: 1 MKEKGLLVVISGPSGAGKGTICKAL---LEKNDFWLSVSATTRNPRVGEV-DGTNYYFLS 56 Query: 57 CGVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + ++E + A + ++ + A+ GK ++ + +D A Q Sbjct: 57 KEEFQNRIKSEGFLEYAEVYGNYYGTPKDSVLSAVDSGKDVVLE--IDIQGALQ------ 108 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIH 170 V+E P+ I LP +R+ NR S E + + F Sbjct: 109 ------------VKETYPEGVFIFILPPSMKELRQRIINRGSETEESLMTRF-------- 148 Query: 171 EKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 + + +I +V+ +V + I ++ +R Sbjct: 149 ---KAAYKEINYVSKYNYAVVN-----DTVVEAVKKIESIVIAER 185 >gi|182434098|ref|YP_001821817.1| putative phosphotransferase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178462614|dbj|BAG17134.1| putative phosphotransferase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 202 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 28/114 (24%) Query: 1 MNSGL-----FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55 M +GL I+ G+ AGK+T LL L R VHV + R +++ Sbjct: 14 MGTGLGPCVVLIT--GVMAAGKSTVAQLLAERLPRA---VHV--------RGDLFRRMIV 60 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKI-------LLCD---RFL 99 S D EAE + + A + +L D R++ Sbjct: 61 SGRADMAPDEAEEARSQLDLRQRLSAQVADAYADDGWTAVVQDIVLGDDLPRYV 114 >gi|167580694|ref|ZP_02373568.1| deoxynucleoside kinase family protein [Burkholderia thailandensis TXDOH] gi|167618798|ref|ZP_02387429.1| deoxynucleoside kinase family protein [Burkholderia thailandensis Bt4] gi|257138028|ref|ZP_05586290.1| deoxynucleoside kinase family protein [Burkholderia thailandensis E264] Length = 227 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 47/179 (26%), Gaps = 51/179 (28%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 18 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 70 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A + + I A ++ D F+ EI Sbjct: 71 Q----LAFALQRERQAGEIAAAYEANMPIVAD-------------------FMPQKNEIF 107 Query: 125 VQEVMPD---------------------CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + +PD + L ++ R+Q R E D + Sbjct: 108 ARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 166 >gi|162449010|ref|YP_001611377.1| sulfate adenylyltransferase [Sorangium cellulosum 'So ce 56'] gi|190360260|sp|A9ENT2|SATC1_SORC5 RecName: Full=Probable bifunctional SAT/APS kinase 1; Includes: RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase; Includes: RecName: Full=Sulfate adenylyltransferase; AltName: Full=ATP-sulfurylase; AltName: Full=Sulfate adenylate transferase; Short=SAT gi|161159592|emb|CAN90897.1| sulfate adenylyltransferase [Sorangium cellulosum 'So ce 56'] Length = 578 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 1 MNSGL-FIS-FEGIEGAGKTTHISLLKRFLQRKNYDV 35 M SG F+ F G+ G+GK+T ++L L R+ V Sbjct: 1 MASGEGFVVWFTGLSGSGKSTLAAMLAAELPRRGVHV 37 >gi|144900974|emb|CAM77838.1| Tetraacyldisaccharide 4'-kinase [Magnetospirillum gryphiswaldense MSR-1] Length = 322 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 4/61 (6%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHV-TREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 GAGKT + R LQ + H TR GGT A L EA++ A Sbjct: 54 GAGKTPVCLAVARHLQERGRQPHFLTRGYGGTEAGPRLVDPLRHPASRVGD---EALLLA 110 Query: 73 A 73 A Sbjct: 111 A 111 >gi|157804014|ref|YP_001492563.1| adenylate kinase [Rickettsia canadensis str. McKiel] gi|166219997|sp|A8EZJ5|KAD_RICCK RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|157785277|gb|ABV73778.1| adenylate kinase [Rickettsia canadensis str. McKiel] Length = 212 Score = 38.5 bits (89), Expect = 0.63, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 79/233 (33%), Gaps = 51/233 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + + F G GAGK T + + + + R ++ + + Sbjct: 1 MIVIFLGPPGAGKGTQGKKIAKKI-----------NVPHIAIGDIFRTIIKTS-----TS 44 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 EAE I + + + N I +++ +L + + Y G + + + Sbjct: 45 EAELINNYVRQGELIPNEIVNQVIKNFLLSSE--YKNGYILDGYPRNLEQA--QFFESFI 100 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL----------------------DYF 162 +++ I D+ ++ +KRV RYS + + DY Sbjct: 101 TEKIK---IIYFDILDELLIKRVLGRYSCKNCGKIYNSYFLQPKTDSVCDVCGSSTFDYR 157 Query: 163 ERKDVMIHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIVW 209 + + +KR +++ + +IV+ + + Q + +I I+ Sbjct: 158 KDDTEEVIKKRIKVYKTETYPLIDYYKNSGHFYIVNGSKNEQEIEIDIQKILK 210 >gi|325968597|ref|YP_004244789.1| hypothetical protein VMUT_1081 [Vulcanisaeta moutnovskia 768-28] gi|323707800|gb|ADY01287.1| hypothetical protein VMUT_1081 [Vulcanisaeta moutnovskia 768-28] Length = 234 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD 34 I G +G+GKTT LL L+ + + Sbjct: 2 IVLIGPQGSGKTTLAKLLVEKLRAQGFR 29 >gi|293380198|ref|ZP_06626280.1| excinuclease ABC subunit A [Lactobacillus crispatus 214-1] gi|290923242|gb|EFE00163.1| excinuclease ABC subunit A [Lactobacillus crispatus 214-1] Length = 946 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|240126587|ref|ZP_04739473.1| putative signal recognition particle protein [Neisseria gonorrhoeae SK-92-679] gi|268685164|ref|ZP_06152026.1| signal recognition particle protein [Neisseria gonorrhoeae SK-92-679] gi|268625448|gb|EEZ57848.1| signal recognition particle protein [Neisseria gonorrhoeae SK-92-679] Length = 417 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + ++ A G I+L D Sbjct: 280 -AGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|218663095|ref|ZP_03519025.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Rhizobium etli IE4771] Length = 254 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 45/141 (31%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + L R L + + +L G + Sbjct: 84 FTGLSGSGKSTIANALDRLLHARGKHTY-----------------VLDGDNVRHGLNRDL 126 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++ V V + G I+L S + + ++ + I Sbjct: 127 GFTEADRVENIRRVAEVAKLMADAGLIVLV-----SLISPFRDERRMARELMEEDEFIE- 180 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 I +D P+D +R Sbjct: 181 --------IFVDTPLDECARR 193 >gi|158335564|ref|YP_001516736.1| adenylate kinase [Acaryochloris marina MBIC11017] gi|158305805|gb|ABW27422.1| adenylate kinase [Acaryochloris marina MBIC11017] Length = 187 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 68/218 (31%), Gaps = 49/218 (22%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64 F G G+GK+T Q T + A + + E Sbjct: 4 VFLGPPGSGKSTQAQAGAARWQ---IPSISTGDLLRDAIATQSDLGKQAQTHVEAGELVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + + + PA G +L D F R+ +Q LD+L +I Sbjct: 61 DT---LMVGLMRESFGS---PATQNG-WIL-DGF---------PRNLAQTQALDTLLQIM 103 Query: 125 VQEVMPDC---TIILDLPVDIGLKRVQNRYSLRESACLDYFERK-------DVMIHEKRR 174 Q + + P D+ ++R+ R +S L + ++ +RR Sbjct: 104 GQ-----LYGQVVYFETPEDLLIERMLKRGRQDDSEDLIRQRLQIYNDQTTPLIDFYRRR 158 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 Q ++ +D + + I + + LV Sbjct: 159 QCLIE-----------IDGSRPESEITDEIASALQPLV 185 >gi|156848898|ref|XP_001647330.1| hypothetical protein Kpol_1002p122 [Vanderwaltozyma polyspora DSM 70294] gi|156118015|gb|EDO19472.1| hypothetical protein Kpol_1002p122 [Vanderwaltozyma polyspora DSM 70294] Length = 503 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 13/91 (14%) Query: 91 KILLC-DRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQ 148 K +L DR+ + A + +D S L ++E PD TI + + Sbjct: 416 KAVLSEDRYAHAEMADEEAKDVSNLDDLVEIEEHVFNNFEPDYRTI---------EELIN 466 Query: 149 NRYSLRESACLDYFERKDVMIHEKRR--QIF 177 N S D+ ++ H+KRR + + Sbjct: 467 NNSDGFNSTSNDFDDKSGRDSHKKRRFDEGY 497 >gi|268581261|ref|XP_002645613.1| Hypothetical protein CBG05336 [Caenorhabditis briggsae] gi|187035157|emb|CAP25831.1| hypothetical protein CBG_05336 [Caenorhabditis briggsae AF16] Length = 191 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 47/214 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT--------REPGGTPAAEAARHVLLSCGVDEF 62 G G+GK T S ++ L Y VH++ RE G+ + + + Sbjct: 9 GPPGSGKGTICSKIQENL---GY-VHLSAGDLLRAERERAGSQFGALIESHIKNGSIVPV 64 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD--SSYAYQGERDSSQHLFLDSL 120 + A + L++G R D S ++ Q + Sbjct: 65 EITCSLLENAMN----LHKTANGFLVDGFP----RNADNLSGWSKQMSGKVHEQF----- 111 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR---QIF 177 + L PVDI + R NR R +D +++ + + + F Sbjct: 112 ------------VLFLSCPVDICINRCLNRGEGRTDDNVDSLKKRVETYNNQTFPIIEHF 159 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + VDS + V +++ + Sbjct: 160 GKL-----NMVRKVDSERPVEEVYEDVVKVFEAA 188 >gi|47568762|ref|ZP_00239457.1| hypothetical protein cytosolic protein [Bacillus cereus G9241] gi|228986042|ref|ZP_04146187.1| hypothetical protein bthur0001_27300 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229156530|ref|ZP_04284620.1| hypothetical protein bcere0010_27150 [Bacillus cereus ATCC 4342] gi|47554542|gb|EAL12898.1| hypothetical protein cytosolic protein [Bacillus cereus G9241] gi|228626924|gb|EEK83661.1| hypothetical protein bcere0010_27150 [Bacillus cereus ATCC 4342] gi|228773754|gb|EEM22175.1| hypothetical protein bthur0001_27300 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 282 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNA-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|319940241|ref|ZP_08014593.1| deoxyguanosine kinase [Streptococcus anginosus 1_2_62CV] gi|319810543|gb|EFW06879.1| deoxyguanosine kinase [Streptococcus anginosus 1_2_62CV] Length = 212 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 75/235 (31%), Gaps = 42/235 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAE 65 I G+ G GKTT+ L L G P E +L ++ Sbjct: 2 IILAGMIGVGKTTYTYRLAEEL-------------GTQPFFEPVEENPILDKYYEDPDKY 48 Query: 66 AEAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS--------SQH 114 A+ ++ + +I+ A + +L DR + D+ + Y Sbjct: 49 GFALQIYFLNKR---FKMIKAAYHDDNNIL-DRSIYEDALFTYINTLKGSISEQEYNIYL 104 Query: 115 LFLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 LD++ E PD I LD D + ++ R E E ++ Sbjct: 105 ELLDNMMEEIQGLPKKAPDLLIYLDGSFDHIMNNIKKRGRDYEQPNE---ENGLADYYQL 161 Query: 173 RRQIFLDIARNQ----PDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 + + + + R + N N V++ +Q+++ + +K Sbjct: 162 LYKHYQNWYEDYNYSPKMRI----ATDDLDIANPNDWNHVYQQIQQKMKTIGLEK 212 >gi|313648103|gb|EFS12549.1| uncharacterized ATP-binding protein yghS [Shigella flexneri 2a str. 2457T] Length = 232 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPCGCYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + + G +++ + R ++ + +G +L+ DR+ Sbjct: 72 KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 121 >gi|312898708|ref|ZP_07758097.1| guanylate kinase [Megasphaera micronuciformis F0359] gi|310620139|gb|EFQ03710.1| guanylate kinase [Megasphaera micronuciformis F0359] Length = 206 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 28/170 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G+ + G GAGK T L+R +Y V TR P + + Sbjct: 3 TKGMLLVVSGPSGAGKGTICDALRRHFPHMDYSVSMTTRAPREGE-KDGVNYFFTDNDRF 61 Query: 61 EFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E E +A + A DH ++ + + G ++ + +D A Q ++ S + Sbjct: 62 EELLEKDAFLEYAKVYDHYYGTPKDYVFNRMDAGHHVMLE--IDIQGAMQIKKAYSDAVC 119 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFER 164 + +P +I +R++NR + + ++ Sbjct: 120 IYV------------------VPPSLEILSQRLRNRRTDSDEVIRKRLDK 151 >gi|284990000|ref|YP_003408554.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160] gi|284063245|gb|ADB74183.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160] Length = 1223 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 18/33 (54%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 I EG GAGKTT ++ ++ L+ + + V Sbjct: 461 LIVLEGAAGAGKTTTLAAARQLLEARGRRLLVV 493 >gi|296110129|ref|YP_003617078.1| adenylylsulfate kinase [Methanocaldococcus infernus ME] gi|295434943|gb|ADG14114.1| adenylylsulfate kinase [Methanocaldococcus infernus ME] Length = 177 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 15/34 (44%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 N G I G G GK+T LK L + Y V Sbjct: 5 NKGFTIWLTGPSGVGKSTLAQALKEKLLSQGYCV 38 >gi|261418739|ref|YP_003252421.1| adenylylsulfate kinase [Geobacillus sp. Y412MC61] gi|297531294|ref|YP_003672569.1| adenylylsulfate kinase [Geobacillus sp. C56-T3] gi|319765554|ref|YP_004131055.1| adenylylsulfate kinase [Geobacillus sp. Y412MC52] gi|261375196|gb|ACX77939.1| adenylylsulfate kinase [Geobacillus sp. Y412MC61] gi|297254546|gb|ADI27992.1| adenylylsulfate kinase [Geobacillus sp. C56-T3] gi|317110420|gb|ADU92912.1| adenylylsulfate kinase [Geobacillus sp. Y412MC52] Length = 203 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + R L ++ +L G + Sbjct: 30 FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA R +++ V + + G+ +L S +A E + ++ + I Sbjct: 73 GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126 Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 I ++ P++ KR R +RE +D Sbjct: 127 --------IYVNCPLEECEKRDPKGLYQKARRGEIREFTGID 160 >gi|206974003|ref|ZP_03234921.1| hypothetical protein BCH308197_2915 [Bacillus cereus H3081.97] gi|206748159|gb|EDZ59548.1| hypothetical protein BCH308197_2915 [Bacillus cereus H3081.97] Length = 282 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNA-KLIIVEGLPGFGKSTTAKLINEILSQNKIEVELFLE 39 >gi|153011547|ref|YP_001372761.1| spermidine/putrescine ABC transporter ATPase subunit [Ochrobactrum anthropi ATCC 49188] gi|151563435|gb|ABS16932.1| spermidine/putrescine ABC transporter ATPase subunit [Ochrobactrum anthropi ATCC 49188] Length = 353 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 55/178 (30%), Gaps = 52/178 (29%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVL 54 G F+SF G G GKTT + ++ F ++ DV + P + Sbjct: 27 KKGEFVSFLGPSGCGKTTVLRMIAGFEAPDNGAIEIDGKDVVDLK-PNQRNIGMVFQAYA 85 Query: 55 LSCGVD-----------EFGAEAEA-----IVFAAARLDHVENVIRPALMEGKILLCDRF 98 L + +AE + RLDH L DR+ Sbjct: 86 LFPNMTVAQNVSFGLRVAGKPKAEIDATVQEMLGLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|85372983|ref|YP_457045.1| TrwC protein [Erythrobacter litoralis HTCC2594] gi|84786066|gb|ABC62248.1| TrwC protein [Erythrobacter litoralis HTCC2594] Length = 970 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 18/30 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 I+ +GI GAGK++ + + L+ + + V Sbjct: 474 IAIQGIAGAGKSSVLKPVAEVLRDEGHPVI 503 >gi|145219829|ref|YP_001130538.1| hypothetical protein Cvib_1022 [Prosthecochloris vibrioformis DSM 265] gi|145205993|gb|ABP37036.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265] Length = 519 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 32/198 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I EG+ G+GKTTH + L R R + S E Sbjct: 334 MLIITEGLSGSGKTTHAAALSEM-----IGAVSVRSDIERKRLAGLRPLQRSSRETEPSI 388 Query: 65 EAEA---IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 EA ++A + L ++ +D+++ Q S + F+D + Sbjct: 389 YTEAKTGETYSALLAIALTT-----LQANLPII----VDATFLRQ----SDRQKFMDLAE 435 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + + P+++ +RV+ R A + H + ++ Sbjct: 436 SVGCGF----MIMSFHAPLELLKERVEKREQEASDASEAGIGVLEAQYHNR-----EALS 486 Query: 182 RNQPDRCHI-VDSAHSFQ 198 ++ +R I ++++ Sbjct: 487 ASE-ERVAIHINTSEPVD 503 >gi|119356214|ref|YP_910858.1| guanylate kinase [Chlorobium phaeobacteroides DSM 266] gi|119353563|gb|ABL64434.1| guanylate kinase [Chlorobium phaeobacteroides DSM 266] Length = 194 Score = 38.5 bits (89), Expect = 0.64, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 21/171 (12%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE- 61 +G + F G GK+T ++ + + V T P E + L E Sbjct: 8 TGKLVVFSAPSGTGKSTIAKIVLERIPSLAFSVSATTRPMRAGEEEGVHYYFLDKKKFEE 67 Query: 62 ---FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G E F + + A+ G LL D LD + + L Sbjct: 68 KIRDGGFIEHEYFFNNYYGTLLDKTVDAVNSGHHLLFD--LD-------VKGALNLKTLF 118 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 L + + PD +R+ R S A ER ++ + Sbjct: 119 PLNSLLIFIRPPDM--------ATLRERLLKRESEDADALNVRLERAELEL 161 >gi|294853135|ref|ZP_06793807.1| iron(III) transport system ATP-binding protein [Brucella sp. NVSL 07-0026] gi|294818790|gb|EFG35790.1| iron(III) transport system ATP-binding protein [Brucella sp. NVSL 07-0026] Length = 353 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|254711378|ref|ZP_05173189.1| polyamine ABC transporter, ATP-binding protein [Brucella pinnipedialis B2/94] gi|254711978|ref|ZP_05173789.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti M644/93/1] gi|254715048|ref|ZP_05176859.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti M13/05/1] gi|256029992|ref|ZP_05443606.1| polyamine ABC transporter, ATP-binding protein [Brucella pinnipedialis M292/94/1] gi|256158156|ref|ZP_05456072.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti M490/95/1] gi|256252893|ref|ZP_05458429.1| polyamine ABC transporter, ATP-binding protein [Brucella ceti B1/94] gi|261216752|ref|ZP_05931033.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti M13/05/1] gi|261219981|ref|ZP_05934262.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti B1/94] gi|261318983|ref|ZP_05958180.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella pinnipedialis B2/94] gi|261319619|ref|ZP_05958816.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti M644/93/1] gi|265987013|ref|ZP_06099570.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella pinnipedialis M292/94/1] gi|265996674|ref|ZP_06109231.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti M490/95/1] gi|260918565|gb|EEX85218.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti B1/94] gi|260921841|gb|EEX88409.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti M13/05/1] gi|261292309|gb|EEX95805.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti M644/93/1] gi|261298206|gb|EEY01703.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella pinnipedialis B2/94] gi|262550971|gb|EEZ07132.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella ceti M490/95/1] gi|264659210|gb|EEZ29471.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella pinnipedialis M292/94/1] Length = 353 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|148560170|ref|YP_001258107.1| putative fructose transport system kinase [Brucella ovis ATCC 25840] gi|148371427|gb|ABQ61406.1| kinase-related protein [Brucella ovis ATCC 25840] Length = 232 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 17/157 (10%) Query: 4 GLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVD 60 G I G GAGK+T L + + + G + LL Sbjct: 41 GRLIVAIAGPPGAGKSTLSDYLLHAINKGGNAPSIIVPMDGFHIDDVILEQRGLLDRKGS 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + RL E I I + DR L+ S A + L Sbjct: 101 PPTFDCAGFSSLLQRLKGAEEEI-------FIPVFDRSLEFSRAAASVVGPEHRILLVEG 153 Query: 121 QEISVQE-----VMP--DCTIILDLPVDIGLKRVQNR 150 + + + P D T+ LD+P + +R+ +R Sbjct: 154 NYLLLDREPWSRLAPFFDMTVYLDVPFAVPERRLTDR 190 >gi|56418949|ref|YP_146267.1| adenylylsulfate kinase [Geobacillus kaustophilus HTA426] gi|56378791|dbj|BAD74699.1| adenylylsulfate kinase [Geobacillus kaustophilus HTA426] Length = 203 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 41/162 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + R L ++ +L G + Sbjct: 30 FTGLSGSGKSTVANAVSRRLFELG-----------------IQNYVLDGDNIRHGLNKDL 72 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA R +++ V + + G+ +L S +A E + ++ + I Sbjct: 73 GFSAADRTENIRRIGEVAKLFVDSGQFVLTA--FISPFA---EDRALVRRLVEEDEFIE- 126 Query: 126 QEVMPDCTIILDLPVDIGLKR-------VQNRYSLRESACLD 160 I ++ P++ KR R +RE +D Sbjct: 127 --------IYVNCPLEECEKRDPKGLYQKARRGEIREFTGID 160 >gi|332142571|ref|YP_004428309.1| UDP-galactose-lipid carrier transferase MED92 [Alteromonas macleodii str. 'Deep ecotype'] gi|327552593|gb|AEA99311.1| UDP-galactose-lipid carrier transferase MED92 [Alteromonas macleodii str. 'Deep ecotype'] Length = 279 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 37/228 (16%), Positives = 70/228 (30%), Gaps = 42/228 (18%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG + +GK I L L + V +P + + L Sbjct: 54 LIVFEGWDASGKGGAIRRLTEKLDPRGVSVFPVAKPAQSDQEKH----FLYRFWKHIPPP 109 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY---AYQGERDSSQHLFLDSLQE 122 +F R H +L +R ++S +Q +L + Sbjct: 110 GSLHIF--DRS-HYGR-----------VLVER-VNSLIERPIWQRSYREINEFE-QTLSD 153 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH-EKRRQIFLDIA 181 V+ V + + + +R + R ++ + +H + R ++ A Sbjct: 154 NGVRIVK----LFMHISSKEQRERFEERLH----NPFKRWKLTEEDLHNRRMRNEYIAAA 205 Query: 182 RNQPDR-------CHIVDSA---HSFQSVATNILNIVWELVQKRVSPL 219 R HI++ + V I+N + E V+ PL Sbjct: 206 NEMFKRTHTSYAPWHIINGEYKWQARIDVLETIVNALSEGVEVAPPPL 253 >gi|76787120|ref|YP_330522.1| hypothetical protein SAK_1928 [Streptococcus agalactiae A909] gi|77405075|ref|ZP_00782175.1| conserved hypothetical protein [Streptococcus agalactiae H36B] gi|76562177|gb|ABA44761.1| conserved hypothetical protein [Streptococcus agalactiae A909] gi|77176369|gb|EAO79138.1| conserved hypothetical protein [Streptococcus agalactiae H36B] Length = 186 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 54/161 (33%), Gaps = 26/161 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ +G GKTT + ++ K Y +P + L ++ Sbjct: 1 MIIAIQGGMAVGKTTALKII-----EKVYPKIAISFEDISPVVDKINKHQLD--NNKLDD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114 E + H + + + +I+L D ++ Y S+ Sbjct: 54 YCEIQQLF---IQHERDRYE-LVRDNEIVLMDYGAEEIAFYTQYFPKVAGYSWTLPSNLL 109 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 L ++ L+E D I LD + +R +N ++ R Sbjct: 110 LEVNRLKECFA-----DYIIFLDADKTVLYQRQKNDFNRRR 145 >gi|332044064|gb|EGI80259.1| ATPase-like protein [Lacinutrix algicola 5H-3-7-4] Length = 180 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 71/220 (32%), Gaps = 49/220 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN+ I G G+GKT+ I+ L H T E +R + L D Sbjct: 1 MNT-KTIVITGGPGSGKTSVINELTNR--------HFTCFE------EISRQITLKARED 45 Query: 61 EF------GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 + + R+ I + + DR + AY D Sbjct: 46 GIEQLFLTNPLQFSELLLDGRIKQYNEAIE---SNNEFVFLDRGIPDIPAYM---DFKGD 99 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD--VMIHEK 172 + D + ++ + IL + ++ + +E D + IHEK Sbjct: 100 EYPDVFNDACLKNKY-NAVFIL------------APWQEIFTSDSERYENFDQAIEIHEK 146 Query: 173 RRQIFLDIARNQPDRCHIVDSA-HSFQSVATNILNIVWEL 211 + + + ++D S ++ +I+NIV L Sbjct: 147 LVETYTNC------GYDLIDVPFGSIEARTEHIINIVKAL 180 >gi|238787075|ref|ZP_04630875.1| LAO/AO transport system kinase [Yersinia frederiksenii ATCC 33641] gi|238724863|gb|EEQ16503.1| LAO/AO transport system kinase [Yersinia frederiksenii ATCC 33641] Length = 318 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 32/91 (35%), Gaps = 7/91 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVDEFGA 64 G GAGK+T + L L + + V + +P GG+ + R + LS F Sbjct: 48 GTPGAGKSTFLEALGEELLSQGHKVAVIAVDPSSPVSGGSILGDKTRMLNLSRAEHAFVR 107 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK-ILL 94 + +I G I++ Sbjct: 108 PVPSRGHLGGISQSTRELILLCEAAGYDIVI 138 >gi|262200458|ref|YP_003271666.1| hypothetical protein Gbro_0439 [Gordonia bronchialis DSM 43247] gi|262083805|gb|ACY19773.1| hypothetical protein Gbro_0439 [Gordonia bronchialis DSM 43247] Length = 188 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 1/39 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 M +G+ ++ +G GAGK+T L L + R Sbjct: 24 MTTGI-VAIDGPSGAGKSTLADALMATLAANGTGAVLVR 61 >gi|20453809|gb|AAM22121.1|AF478169_14 thymidine kinase [porcine lymphotropic herpesvirus 1] Length = 580 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 31/188 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP------AAEAARHVLLSCGVDEF 62 FEG GK+T I+ L++ ++ + EP + + V + Sbjct: 261 FEGAMAVGKSTMITHLQQVIEED--SIITFPEPMYYWTKVYNNVLKQIYKLNKYYRVGKE 318 Query: 63 GAEAEAI-------------VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ--- 106 A AE + R H ++ P K ++ DR S+ Sbjct: 319 SASAELLACQVKFMTPLKTMWSFKQRCMHPDSPSAPVTPFDKWVIFDRHPLSATVVFPLI 378 Query: 107 --GERDSSQHLFLDSLQEI-SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES-ACLDYF 162 S + F++ L + D +++ L +++ KR++ R+ E L + Sbjct: 379 LLKRGMLSFNDFINLLNTFTAANG---DTIVLMSLDIEVNYKRLKRRFRKYEGFVDLAHL 435 Query: 163 ERKDVMIH 170 + H Sbjct: 436 KEVKAAFH 443 >gi|23499877|ref|NP_699317.1| spermidine/putrescine ABC transporter ATP-binding protein [Brucella suis 1330] gi|161620200|ref|YP_001594086.1| polyamine ABC transporter, ATP-binding protein [Brucella canis ATCC 23365] gi|163844308|ref|YP_001621963.1| polyamine ABC transporter, ATP-binding protein [Brucella suis ATCC 23445] gi|254702543|ref|ZP_05164371.1| polyamine ABC transporter, ATP-binding protein [Brucella suis bv. 3 str. 686] gi|260568552|ref|ZP_05839021.1| spermidine/putrescine ABC transporter [Brucella suis bv. 4 str. 40] gi|261753116|ref|ZP_05996825.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis bv. 3 str. 686] gi|23463451|gb|AAN33322.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella suis 1330] gi|161337011|gb|ABX63315.1| polyamine ABC transporter, ATP-binding protein [Brucella canis ATCC 23365] gi|163675031|gb|ABY39141.1| polyamine ABC transporter, ATP-binding protein [Brucella suis ATCC 23445] gi|260155217|gb|EEW90298.1| spermidine/putrescine ABC transporter [Brucella suis bv. 4 str. 40] gi|261742869|gb|EEY30795.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis bv. 3 str. 686] Length = 353 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|28377820|ref|NP_784712.1| deoxyguanosine kinase [Lactobacillus plantarum WCFS1] gi|254556004|ref|YP_003062421.1| deoxyguanosine kinase [Lactobacillus plantarum JDM1] gi|300767806|ref|ZP_07077716.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308179998|ref|YP_003924126.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum ST-III] gi|28270653|emb|CAD63559.1| deoxyguanosine kinase [Lactobacillus plantarum WCFS1] gi|254044931|gb|ACT61724.1| deoxyguanosine kinase [Lactobacillus plantarum JDM1] gi|300494791|gb|EFK29949.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308045489|gb|ADN98032.1| deoxyguanosine kinase [Lactobacillus plantarum subsp. plantarum ST-III] Length = 211 Score = 38.5 bits (89), Expect = 0.65, Method: Composition-based stats. Identities = 45/223 (20%), Positives = 76/223 (34%), Gaps = 36/223 (16%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKT+ L+ K P + A + Sbjct: 9 GAGKTSLTQLVANHFGSK----AFYESVDDNPILPLFYK----------DPKKYAFLLQI 54 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQ----GERDSSQHLFLDSLQEISVQE 127 L+ + I+ A +L DR F DS + G +++ DSL + +QE Sbjct: 55 YFLNKRLDSIKSAFANDLDVL-DRSIFEDSLLFHLNGDLGRATNTEVDIYDSLLDNMMQE 113 Query: 128 VM-------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDV-MIHEKRRQIFLD 179 + PD I +++ D LKR+Q R E D D+ ++ + + D Sbjct: 114 LPEASHQKSPDLLIHINISFDTMLKRIQKRGRSYEQIDQDP----DLYKYYQTLNERYDD 169 Query: 180 IARNQPDRCHI-VDSAHSFQSVA-TNILNIVWELVQKRVSPLS 220 N + +D VA + V L+ ++V+ L Sbjct: 170 WYANYDHSPKMQIDGDQ-LDFVADADARKEVIRLIDEKVASLG 211 >gi|332174368|gb|AEE23622.1| adenylylsulfate kinase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 198 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T +LL++ L + LL G + Sbjct: 32 GLSGSGKSTIANLLEKKLADNGKHTY-----------------LLDGDNVRHGLNGDLTF 74 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 R++++ + + + G I++ Sbjct: 75 SDKDRVENIRRISELAKLFVDSGLIVIT 102 >gi|315039252|ref|YP_004032820.1| deoxyguanosine kinase [Lactobacillus amylovorus GRL 1112] gi|312277385|gb|ADQ60025.1| deoxyguanosine kinase [Lactobacillus amylovorus GRL 1112] Length = 228 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 47/230 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ---------- 113 + A + L+ + I+ AL + +L DR + + +Q D + Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTQDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYY 106 Query: 114 ---HLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 H +D L + + PD + +++ D +KR+Q R E D + Sbjct: 107 ELLHNMMDELDRMPKKN--PDLLVHINVSYDTMIKRIQKRGRPYEQLSYD---STLEDYY 161 Query: 171 EKRRQIFLDIARNQPDRCHI-VDSAH--------SFQSVATNILNIVWEL 211 ++ + + + +D + V I++ + E+ Sbjct: 162 KRLLRYYKPWYEKYDYSPKMEIDGDKYDFMSSEEDREIVLDQIVDKLKEV 211 >gi|308184402|ref|YP_003928535.1| adenylate kinase [Helicobacter pylori SJM180] gi|308060322|gb|ADO02218.1| adenylate kinase [Helicobacter pylori SJM180] Length = 191 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + N + G AE+A+ ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIA----KNNSETIAHFSTGDLLRAESAKKTERGLLIE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ +I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILAAIKSSSKRIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V + + R R D +V+ H + R +FL Sbjct: 105 AQNEVILKSV---------IEVKVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + I++ S + + + + Sbjct: 151 DPLVAIQNFYKAKHLHKIINGERSIEEIVNEMQEYILSF 189 >gi|302347928|ref|YP_003815566.1| cytidylate kinase, putative [Acidilobus saccharovorans 345-15] gi|302328340|gb|ADL18535.1| cytidylate kinase, putative [Acidilobus saccharovorans 345-15] Length = 185 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 66/217 (30%), Gaps = 56/217 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 I G G+GK+T+ L L + E G E R +D Sbjct: 12 IVVSGQPGSGKSTYARRLAAELGLRYYTTGQAFRSLAERMGVSLMELNRLAERDPSID-- 69 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 A + + G +++ DS A L L Sbjct: 70 ---------LAIDAESLNEA-----RRGCVVI-----DSHLA---------GWLLRDLA- 100 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRRQIF--- 177 D TI + + +R+ R S ES L FE ++++ E+ + + Sbjct: 101 --------DVTIYVKASLPERTRRIALRDSKPESEAL--FEASQREISHWERFAKYYGID 150 Query: 178 -LDIARNQPDRCHIVDSAH-SFQSVATNILNIVWELV 212 D++ +VD+ + IL V + + Sbjct: 151 LRDLSSYD----LVVDTTRMGIEETYQVILTFVKKAL 183 >gi|298244572|ref|ZP_06968378.1| aminoglycoside phosphotransferase [Ktedonobacter racemifer DSM 44963] gi|297552053|gb|EFH85918.1| aminoglycoside phosphotransferase [Ktedonobacter racemifer DSM 44963] Length = 578 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 27/142 (19%) Query: 15 AGKTTHISLLKRFLQRKNY--DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 +GK+T L++ L + DV + +PA A H + + Sbjct: 386 SGKSTLAHTLQQHLSFPLFSSDVIRKQLTRQSPAMHQAEHYGKGNYTPSWNRKT-----Y 440 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 AA H P L +G+ ++ D + L +++ Sbjct: 441 AALAQHA----LPYLEQGRSVILD---------ASFSRREERQVLAR-AAVALGA----K 482 Query: 133 TIILD--LPVDIGLKRVQNRYS 152 + ++ P ++ L R+ R+ Sbjct: 483 VVFIECVCPPEVALARLHGRWQ 504 >gi|291284369|ref|YP_003501187.1| hypothetical protein G2583_3712 [Escherichia coli O55:H7 str. CB9615] gi|290764242|gb|ADD58203.1| Uncharacterized ATP-binding protein yghT [Escherichia coli O55:H7 str. CB9615] Length = 144 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 41/119 (34%), Gaps = 17/119 (14%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKN--YDVHV-----------TREP--GGTPAAEAA 50 I+ G +G+GK+T L +++ VH+ T+ P G + Sbjct: 8 LIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIE 67 Query: 51 RHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY--AYQG 107 R+ + + A I AR + G I+L DR+ AY G Sbjct: 68 RNQVKTAKKLPGPVPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDG 126 >gi|256842753|ref|ZP_05548241.1| excinuclease ABC, A subunit [Lactobacillus crispatus 125-2-CHN] gi|262045720|ref|ZP_06018684.1| excinuclease ABC, A subunit [Lactobacillus crispatus MV-3A-US] gi|256614173|gb|EEU19374.1| excinuclease ABC, A subunit [Lactobacillus crispatus 125-2-CHN] gi|260573679|gb|EEX30235.1| excinuclease ABC, A subunit [Lactobacillus crispatus MV-3A-US] Length = 946 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|251780114|ref|ZP_04823034.1| deoxyguanosIne kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084429|gb|EES50319.1| deoxyguanosIne kinase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 217 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 25/165 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ + GAGK++ ++ DV P + + DE Sbjct: 1 MLITVGAMIGAGKSSLAKIIGEHF---GTDVFYES-VDDNPILP----LFYTASDDEIQK 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--------- 115 + + L+ I+ AL+ +L DR + + + + Sbjct: 53 KRYPFLLQLWFLNTRFKSIKKALVNDNNVL-DRSIYEDWYFAKVNRDLGRISDLEFNIYE 111 Query: 116 -----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 L+ L E+ + PD I L + L R++ R E Sbjct: 112 ELLNNMLEELDELPKKA--PDLMIYLSGRFETILDRIRKRGRGYE 154 >gi|238853235|ref|ZP_04643620.1| excinuclease ABC subunit A [Lactobacillus gasseri 202-4] gi|238834119|gb|EEQ26371.1| excinuclease ABC subunit A [Lactobacillus gasseri 202-4] Length = 953 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T ++L LKR L +K Sbjct: 629 GKFIVVTGVSGSGKSTLVNLILKRALAQK 657 >gi|157964240|ref|YP_001499064.1| Signal recognition particle protein [Rickettsia massiliae MTU5] gi|157844016|gb|ABV84517.1| Signal recognition particle protein [Rickettsia massiliae MTU5] Length = 452 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT S L L+ +N V + PAA+ +L Sbjct: 112 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 155 >gi|126330981|ref|XP_001366462.1| PREDICTED: similar to bifunctional ATP sulfurylase/adenosine 5-phosphosulfate kinase [Monodelphis domestica] Length = 616 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 45/136 (33%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 51 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 96 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 97 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 144 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 145 FFEVFVDAPLHVCEER 160 >gi|134294838|ref|YP_001118573.1| adenylylsulfate kinase [Burkholderia vietnamiensis G4] gi|134137995|gb|ABO53738.1| adenylylsulfate kinase [Burkholderia vietnamiensis G4] Length = 195 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 32/94 (34%), Gaps = 21/94 (22%) Query: 6 FIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 F+ G+ GAGK+T SLLK L + R LL G Sbjct: 28 FVVWLTGVSGAGKSTLASLLKLQLDALGH-----------------RTYLLDGDTLREGL 70 Query: 65 EAEAIVFAAARLDHVE---NVIRPALMEGKILLC 95 + A R +++ V R G I++ Sbjct: 71 NRDLGFSDADRRENIRRTAEVARLMTDAGFIVIA 104 >gi|116629945|ref|YP_815117.1| excinuclease ATPase subunit [Lactobacillus gasseri ATCC 33323] gi|311110422|ref|ZP_07711819.1| excinuclease ABC subunit A [Lactobacillus gasseri MV-22] gi|116095527|gb|ABJ60679.1| Excinuclease ABC subunit A [Lactobacillus gasseri ATCC 33323] gi|311065576|gb|EFQ45916.1| excinuclease ABC subunit A [Lactobacillus gasseri MV-22] Length = 953 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T ++L LKR L +K Sbjct: 629 GKFIVVTGVSGSGKSTLVNLILKRALAQK 657 >gi|31242187|ref|XP_321524.1| AGAP001585-PA [Anopheles gambiae str. PEST] gi|28629060|gb|AAO49462.1|AF488801_1 multisubstrate deoxyribonucleoside kinase [Anopheles gambiae] gi|30173772|gb|EAA01224.2| AGAP001585-PA [Anopheles gambiae str. PEST] Length = 246 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 28/215 (13%) Query: 3 SGL--FISF-EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL----L 55 SG F F EG G+GKTT ++ ++F D+ + EP ++L Sbjct: 12 SGKKPFTVFVEGNIGSGKTTFLNHFQKF-----NDICLLTEPVEKWRNCGGVNLLDLMYK 66 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYA----YQGER 109 + + H + + + L R F++S A +QG Sbjct: 67 ESHRWAMPFQTYVTLTMLDM--HTCQTDKSVKLMERSLFSARNCFVESMLASGSLHQGMY 124 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + Q + I +Q D + L ++ +R++ R ES + ++ + Sbjct: 125 NVLQEWYDFICCNIHIQA---DLIVYLQTSPEVVYERMKQRARSEESCVPLEYLKELHEL 181 Query: 170 HEK-RRQIFLDIARNQPDRCHIVDSAHSFQSVATN 203 HE A +P ++++ ++ Sbjct: 182 HENWLIHG----ASPRPAPVLVLNADLDLNTIGAE 212 >gi|317010601|gb|ADU84348.1| guanylate kinase [Helicobacter pylori SouthAfrica7] Length = 206 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 7/97 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63 L I G GAGK+T L+ + + + + TR+P + + +S + G Sbjct: 7 LLI-LSGPSGAGKSTLTKYLQEKIPKTYFSLSTTTRKPREGEI-DGLHYNFVSEEEFKQG 64 Query: 64 AEAEAIVFAAARLDHV----ENVIRPALMEGKILLCD 96 E + A +H + ++ AL EGKI++ D Sbjct: 65 IEKGQFLEWAIVHNHYYGTSKALVEKALKEGKIVIFD 101 >gi|329942884|ref|ZP_08291663.1| adenylate kinases family protein [Chlamydophila psittaci Cal10] gi|313848056|emb|CBY17054.1| adenylate kinase [Chlamydophila psittaci RD1] gi|328815144|gb|EGF85133.1| adenylate kinases family protein [Chlamydophila psittaci Cal10] gi|328914725|gb|AEB55558.1| Adenylate kinase [Chlamydophila psittaci 6BC] Length = 213 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 49/158 (31%), Gaps = 36/158 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHV 53 M + +F G G+GK T L L+ + P G AAE Sbjct: 1 MLNNVFYIIMGPPGSGKGTQSQRLAHLLKLPHISSGELFRSAIESASPLGIKAAEYINQG 60 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 L +G EA+ +P G I+ G + Sbjct: 61 CLVPDEIVWGMVQEALN-------------QPECRSGCII------------DGFPRTLD 95 Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPVDIGLKRVQNR 150 L L + VQ D I LD+ + ++R+ +R Sbjct: 96 QAIL--LNDFFVQSHA-DYRVIQLDVSNEEIIRRIHSR 130 >gi|295692553|ref|YP_003601163.1| uvrABC system protein a [Lactobacillus crispatus ST1] gi|295030659|emb|CBL50138.1| UvrABC system protein A [Lactobacillus crispatus ST1] Length = 946 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|256848937|ref|ZP_05554371.1| excinuclease subunit A [Lactobacillus crispatus MV-1A-US] gi|312977727|ref|ZP_07789474.1| excinuclease ABC subunit A [Lactobacillus crispatus CTV-05] gi|256714476|gb|EEU29463.1| excinuclease subunit A [Lactobacillus crispatus MV-1A-US] gi|310895466|gb|EFQ44533.1| excinuclease ABC subunit A [Lactobacillus crispatus CTV-05] Length = 946 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|218457928|ref|ZP_03498019.1| ABC transporter ATP-binding protein [Rhizobium etli Kim 5] Length = 99 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Query: 1 MN--SGLFISFEGIEGAGKTTHISLLK 25 MN G FISF G G GKTT + ++ Sbjct: 24 MNIEKGEFISFLGPSGCGKTTVLRMIA 50 >gi|187729898|ref|YP_001853792.1| putative conjugative transfer protein TraD [Vibrio tapetis] gi|182894457|gb|ACB99622.1| conjugative coupling factor TraD [Vibrio tapetis] Length = 701 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 5/125 (4%) Query: 10 EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDEF-GAEA 66 +G GAGK+ + L +++++ V + + + ++ LL+ + + Sbjct: 204 DGTTGAGKSVLLRKLLTWIRKRGDKAIVYDKGCTFTSKFFDPSQDTLLNPFDERCANWDV 263 Query: 67 EAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A +++ N + P EG + R + SS AYQ +D L I Sbjct: 264 WCDAKDAPDFENIANALIPQHGEGDPFWVDSARTIFSSAAYQMSQDDKPCSTARLLSLIL 323 Query: 125 VQEVM 129 E+ Sbjct: 324 TSELE 328 >gi|163783937|ref|ZP_02178907.1| Cytidylate kinase [Hydrogenivirga sp. 128-5-R1-1] gi|159880788|gb|EDP74322.1| Cytidylate kinase [Hydrogenivirga sp. 128-5-R1-1] Length = 167 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 15/25 (60%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQ 29 + I+ +G GAGK+T L+ + L Sbjct: 1 MIIAIDGPAGAGKSTIAKLIAQKLN 25 >gi|108799320|ref|YP_639517.1| shikimate kinase [Mycobacterium sp. MCS] gi|119868436|ref|YP_938388.1| shikimate kinase [Mycobacterium sp. KMS] gi|126434978|ref|YP_001070669.1| shikimate kinase [Mycobacterium sp. JLS] gi|108769739|gb|ABG08461.1| shikimate kinase [Mycobacterium sp. MCS] gi|119694525|gb|ABL91598.1| shikimate kinase [Mycobacterium sp. KMS] gi|126234778|gb|ABN98178.1| shikimate kinase [Mycobacterium sp. JLS] Length = 235 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 54/207 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T L + L + T ++E A + Sbjct: 9 GLPGSGKSTIGRRLAKAL---GLTLLDT-----------------DAAIEETTGRTIADI 48 Query: 71 FAAA------RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 FA R++ E VIR AL +L G + D+L + Sbjct: 49 FATDGEQEFRRIE--EEVIRSALQTHDGVLS----------LGGGAVTTPGVRDALAGHT 96 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 I L++ G++R A D E+ ++ + ++ +A Sbjct: 97 --------VIYLEISAAEGVRRTGGSTVRPLLAGPDRAEKYKALMDARVP-LYRRVATM- 146 Query: 185 PDRCHIVDSA-HSFQSVATNILNIVWE 210 V++ + +V +I+ + + Sbjct: 147 -----RVNTNRRNPGAVVRHIVARLEK 168 >gi|94984935|ref|YP_604299.1| dephospho-CoA kinase [Deinococcus geothermalis DSM 11300] gi|94555216|gb|ABF45130.1| dephospho-CoA kinase [Deinococcus geothermalis DSM 11300] Length = 219 Score = 38.5 bits (89), Expect = 0.66, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 80/221 (36%), Gaps = 39/221 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVH--------VTREPGGTPAAEAARHVLLSCGVDEFGAE 65 GAGK+T L L+ + V VTR+P EAA ++ GV + A Sbjct: 19 GAGKSTVARL----LRARGLTVLDADEVAREVTRDPAVLAEIEAAFPGVVRGGVLDRAAL 74 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A A ARL + + P + + + L Q + + + + Sbjct: 75 AAAAFADPARLALLNAITHPRVRQKMLALE----------QAAAARGESWVVQDVPLLFE 124 Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + D +++D P+D+ L RV R L L R+ +++R Sbjct: 125 GGLEAGMDAVLVVDAPLDLRLARVAARSGLTAEEVLARDARQMSAEEKRKRAT------- 177 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 ++D++ ++ + + L V PL++ + Sbjct: 178 -----VVLDNSGDLANLERQVAAALDTL---GVWPLTASRS 210 >gi|319794879|ref|YP_004156519.1| hypothetical protein Varpa_4238 [Variovorax paradoxus EPS] gi|315597342|gb|ADU38408.1| hypothetical protein Varpa_4238 [Variovorax paradoxus EPS] Length = 161 Score = 38.5 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 36/183 (19%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T L P +E A L G E + + + Sbjct: 13 GAGKSTLTRRLADA-------------PATVLISEDAWLAALYPG--EIVDLPDYVRTST 57 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-SLQEISVQEVMPDC 132 + + L G ++ D +++ + R + + L Sbjct: 58 RLKQVMAEHVVALLAAGVSVVLDFPANTASSRAWARGIFEKAGVAHRLH----------- 106 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 LD+P ++ R++ R + E FE D R +A ++ + H+V Sbjct: 107 --FLDVPDEVCKARLRARNASGEHP----FETTDAEFDLITRHF---VAPSEAEGFHVVH 157 Query: 193 SAH 195 +A Sbjct: 158 AAQ 160 >gi|254699423|ref|ZP_05161251.1| polyamine ABC transporter, ATP-binding protein [Brucella suis bv. 5 str. 513] gi|261749873|ref|ZP_05993582.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis bv. 5 str. 513] gi|261739626|gb|EEY27552.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella suis bv. 5 str. 513] Length = 353 Score = 38.5 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|227877199|ref|ZP_03995273.1| excision endonuclease subunit UvrA [Lactobacillus crispatus JV-V01] gi|227863253|gb|EEJ70698.1| excision endonuclease subunit UvrA [Lactobacillus crispatus JV-V01] Length = 962 Score = 38.5 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 644 GKFIVVSGVSGSGKSTLVNMILKRALAQK 672 >gi|150026050|ref|YP_001296876.1| hypothetical protein FP2011 [Flavobacterium psychrophilum JIP02/86] gi|149772591|emb|CAL44074.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 177 Score = 38.5 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 17/116 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-- 64 + G G GKTT I L K Y P E +R V+L + Sbjct: 6 VVIIGGPGTGKTTII----DGLLSKGY----CCYP------EISREVILEAKKEGIEQLF 51 Query: 65 EAEAIVFAAARLDHVENVIRPALME-GKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + ++F+ L+ + AL E I+ DR + AY S F D+ Sbjct: 52 LEKPLLFSELLLEGRKKQFENALAETHDIVFLDRGIPDILAYMHYIGDSYPSFFDA 107 >gi|90408036|ref|ZP_01216208.1| putative arsenical pump-driving ATPase(Arsenite-translocating ATPase) [Psychromonas sp. CNPT3] gi|90310880|gb|EAS38993.1| putative arsenical pump-driving ATPase(Arsenite-translocating ATPase) [Psychromonas sp. CNPT3] Length = 602 Score = 38.5 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 9/67 (13%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G G GKTT + L L ++ ++VH+T + L + V Sbjct: 348 MGKG---------GVGKTTIAAALACELAKRGHNVHLTTSDPAANLSATLHGTLENLEVT 398 Query: 61 EFGAEAE 67 E E Sbjct: 399 RIDPEIE 405 >gi|329117115|ref|ZP_08245832.1| excinuclease ABC, A subunit [Streptococcus parauberis NCFD 2020] gi|326907520|gb|EGE54434.1| excinuclease ABC, A subunit [Streptococcus parauberis NCFD 2020] Length = 943 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%) Query: 4 GLFISFEGIEGAGKTTHI-----SLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G FI+ G+ G+GK+T I L + L R + + GT E + Sbjct: 634 GKFIAVTGVSGSGKSTLINSILKKALAQKLNRNSEKPGKYKSIEGTEHIERLIDI 688 >gi|318604573|emb|CBY26071.1| shikimate kinase III [Yersinia enterocolitica subsp. palearctica Y11] Length = 174 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 66/213 (30%), Gaps = 46/213 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M +F+ G GAGKTT L + L+ + D ++ + AE ++ G Sbjct: 1 MTQTIFMV--GARGAGKTTIGKALAQALEYRFIDTDLFMQQTLQSSVAE----IVAREGW 54 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 D F + V G +L + ++ Q Sbjct: 55 DGFRLRESMAL------QTVTAPKTVVATGGGAVLS--HDNRTFMRQHG----------- 95 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL--DYFERKDVMIHEKRRQIF 177 I L ++ +R+ + L + + + R + Sbjct: 96 ------------VVIYLRASANVLAERLAEDPEDAQRPSLTGKPIVEEMLDVLASREPFY 143 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWE 210 ++A H++D+ + V IL+I+ + Sbjct: 144 QEVAH------HVLDATQPPEEVVEQILHILAD 170 >gi|307822906|ref|ZP_07653136.1| guanylate kinase [Methylobacter tundripaludum SV96] gi|307735681|gb|EFO06528.1| guanylate kinase [Methylobacter tundripaludum SV96] Length = 204 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 34/172 (19%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTRE--PGGTPAAEAARHVLLSC 57 MN G GAGKT+ + L L V H TR+ PG + +S Sbjct: 1 MNIGKLYIISAPSGAGKTSLVKQLVADLDDLTVSVSHTTRQMRPGEAHGQDY---YFVSV 57 Query: 58 GVDEFGAEAEAIVFAAARLDHV----ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 + E +A + A D+ + + L +G ++ + +QG Sbjct: 58 ADFQAMQEQQAFLEHAQVFDNFYGTAQQTVEENLKQGLDVILE------IDWQGAEQ--- 108 Query: 114 HLFLDSLQEISVQEVMPD-CTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 +++++PD +I + LP ++ L+R++NR E Sbjct: 109 -----------IKKLLPDSLSIFI-LPPSTEVLLQRLRNRGQDGEEIIARRM 148 >gi|307571144|emb|CAR84323.1| coaE [Listeria monocytogenes L99] Length = 219 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 78/216 (36%), Gaps = 32/216 (14%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAAR----HVLLSCGVD 60 G+ G+ GK+T +++++ L + EPG E +LL+ G Sbjct: 25 GLTGSVATGKSTVSNMIQQAGIPLVDADVAARKVVEPGTEGLKEIVAYFGGEILLADGTL 84 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E I + + + + P + + + +RF + + LF L Sbjct: 85 DRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARERFFRAGE--ELVFFDIPLLFESHL 142 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179 + + Q V + + LKR+ R +L + L E + + I EK R+ F Sbjct: 143 ESLVDQIV----VVW--TTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 193 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++D+ S + + + V+ + Sbjct: 194 ----------VIDNNESLEKTQKQVYTFIERFVKNK 219 >gi|304392647|ref|ZP_07374587.1| cell division protein FtsY [Ahrensia sp. R2A130] gi|303295277|gb|EFL89637.1| cell division protein FtsY [Ahrensia sp. R2A130] Length = 585 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 53/156 (33%), Gaps = 20/156 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT I L + L + + G AA L G A + Sbjct: 384 GVNGSGKTTTIGKLSQKLYDAGFSTLLV---AGDTFRAAAIEQLKIWGDRTQSPVAFRDL 440 Query: 71 FAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQHLFLDSLQEIS----- 124 A + AL EG+ + L D R ++ +D L++I Sbjct: 441 -GADSAGLAYDAYAKALDEGQDVMLMD---------TAGRLQNKTELMDELRKIIRVLKK 490 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 P T++L L G + +E A ++ Sbjct: 491 QDPTAPH-TVLLTLDATTGQNALSQVEIFKEVAGVN 525 >gi|258591367|emb|CBE67666.1| putative LAO/AO transport system ATPase, partial, 5' end [NC10 bacterium 'Dutch sediment'] Length = 287 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 10/96 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHV--LLSCG 58 I G G+GK+T L L++++ V V +P GG + R L G Sbjct: 46 IGITGPPGSGKSTLADRLTEELRKRDKTVGIVAVDPTSPFTGGAILGDRIRMQSHSLDAG 105 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 V + AR ++ GK ++ Sbjct: 106 VFIRSMATRGHLGGLARA--TNEIVDVMDAAGKEVI 139 >gi|258653083|ref|YP_003202239.1| SARP family transcriptional regulator [Nakamurella multipartita DSM 44233] gi|258556308|gb|ACV79250.1| transcriptional regulator, SARP family [Nakamurella multipartita DSM 44233] Length = 885 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 33/97 (34%), Gaps = 10/97 (10%) Query: 8 SFEGIEGAGKTTHISL-LKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G G+GK++ + L R + V +T PG P A L + + Sbjct: 295 VITGPSGSGKSSLVRAGLAARFARGGHPVVIT--PGADPLAAVGPEPLPAGELLVVDQAE 352 Query: 67 EAIVFAAA---RLDHVENVIRPALMEGKILL---CDR 97 E R + +IR G +++ DR Sbjct: 353 ELFTLTTDPDARSQFLARLIRHH-DRGPLVMVLRADR 388 >gi|149195097|ref|ZP_01872189.1| guanylate kinase [Caminibacter mediatlanticus TB-2] gi|149134810|gb|EDM23294.1| guanylate kinase [Caminibacter mediatlanticus TB-2] Length = 210 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 33/105 (31%), Gaps = 12/105 (11%) Query: 1 MN-SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT-----RE---PGGTPAAEAAR 51 M G + G G+GKT+ + L+ Y T RE G + Sbjct: 4 MKVKGSILVISGPSGSGKTSLAREVCNELKDLAYFSISTTTRSIREGERDGVDYFFVSKE 63 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 L F AE + I AL +GKI+ D Sbjct: 64 EFLKDVEKGYFLEWAEVHGNFYGTS---KKQINEALNQGKIVFLD 105 >gi|126658515|ref|ZP_01729663.1| hypothetical protein CY0110_21360 [Cyanothece sp. CCY0110] gi|126620257|gb|EAZ90978.1| hypothetical protein CY0110_21360 [Cyanothece sp. CCY0110] Length = 510 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 58/154 (37%), Gaps = 29/154 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCGVD 60 + G I G+ G+GKTT L + + R+ G P E L S + Sbjct: 337 HQGKIILMSGLSGSGKTTIAKYLAQQINGILIRSDAVRKHIGNIPLDETGDSELYS---E 393 Query: 61 EFGAEA-EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + E +++ + +I + EG ++ D +H + ++ Sbjct: 394 EMNKKTYETLIY-------LGEII---VKEGFSVILD------------AKFDRHQWRET 431 Query: 120 LQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYS 152 + EI+ + + TI P++I R+ NR Sbjct: 432 VIEIAKKNNI-SLTILYCHAPLEILSDRLSNRQG 464 >gi|148269869|ref|YP_001244329.1| ABC transporter related [Thermotoga petrophila RKU-1] gi|147735413|gb|ABQ46753.1| ABC transporter related [Thermotoga petrophila RKU-1] Length = 258 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 G I+ G GAGK+T + + L+ + ++ Sbjct: 25 RKGELIAILGPNGAGKSTLLKCVAGILKCQGVEIF 59 >gi|58221321|gb|AAW68303.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221323|gb|AAW68304.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221329|gb|AAW68307.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221331|gb|AAW68308.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221337|gb|AAW68311.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221341|gb|AAW68313.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|108937136|gb|ABG23380.1| putative signal recognition particle protein [Neisseria gonorrhoeae] gi|116582907|gb|ABK00076.1| regulatory protein [Neisseria gonorrhoeae] gi|116582909|gb|ABK00077.1| regulatory protein [Neisseria gonorrhoeae] gi|193735092|gb|ACF20055.1| regulatory protein [Neisseria gonorrhoeae] gi|193735100|gb|ACF20059.1| regulatory protein [Neisseria gonorrhoeae] gi|193735110|gb|ACF20064.1| regulatory protein [Neisseria gonorrhoeae] Length = 140 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|326383219|ref|ZP_08204907.1| adenylate kinase [Gordonia neofelifaecis NRRL B-59395] gi|326197969|gb|EGD55155.1| adenylate kinase [Gordonia neofelifaecis NRRL B-59395] Length = 182 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 63/218 (28%), Gaps = 53/218 (24%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG------GTPAAEAARHVLLSCGVDE 61 G GAGK T L+ L T + GTP A+ L + Sbjct: 4 VILGPPGAGKGTQAELMSEAL---GIPHISTGDLFRANISQGTPIGVEAKKYL--DAGNL 58 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS---YAYQGERDSSQHLFLD 118 E + E V P +G + D F S+ A +G D Sbjct: 59 VPPEITINMV-------RERVAEPDASKGF--ILDGFPRSTEQAVALEGILDDLSTKL-- 107 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY-----FERKDVMIHEKR 173 D + + D+ ++R+ R ++ + ++ + Sbjct: 108 ------------DGVLSFKVDTDVVVERMLARGRADDTEEVIRNRMAVYDAETAP----- 150 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + + D+ +D+ S V +L + + Sbjct: 151 ------LLDHYADQVTEIDAVGSVDEVHQRVLRALGKA 182 >gi|269123700|ref|YP_003306277.1| cytidylate kinase [Streptobacillus moniliformis DSM 12112] gi|268315026|gb|ACZ01400.1| cytidylate kinase [Streptobacillus moniliformis DSM 12112] Length = 213 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 14/24 (58%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL 28 + I+ +G G+GK+T + + L Sbjct: 1 MIIAIDGPSGSGKSTVAKKIAQKL 24 >gi|261250005|ref|ZP_05942582.1| signal recognition particle receptor protein FtsY [Vibrio orientalis CIP 102891] gi|260939509|gb|EEX95494.1| signal recognition particle receptor protein FtsY [Vibrio orientalis CIP 102891] Length = 406 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 209 GVNGVGKTTTIGKLAKQFQAQGKSVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 264 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A +G +++ D Sbjct: 265 TGADSASVIYDAIESAKAKGVDVVIAD 291 >gi|255319697|ref|ZP_05360905.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens SK82] gi|262380021|ref|ZP_06073176.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens SH164] gi|255303226|gb|EET82435.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens SK82] gi|262298215|gb|EEY86129.1| polyphosphate-AMP phosphotransferase [Acinetobacter radioresistens SH164] Length = 473 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 68/226 (30%), Gaps = 56/226 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG++ AGK I + + L + Y ++ P R L ++ Sbjct: 283 IVFEGMDAAGKGGAIKRIVKKLDPREYTIYSIAAPEKYE----LRRPYLWRFWNKLDEHE 338 Query: 67 EAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + ++F R + + I + AY D + Sbjct: 339 DIMIF--DRSWYGRVLVERIEGFAKPAEW---------QRAY------------DEINRF 375 Query: 124 SVQEVMPDCT--------IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR- 174 D T L + D KR Q R F+ D + + Sbjct: 376 EK-----DLTDSQTLVIKFWLAISKDEQAKRFQARADTPHK----RFKITDEDWRNREKW 426 Query: 175 QIFLDIARNQPDR-------CHIVDSAHSFQSVATNILNIVWELVQ 213 +L A + +R ++ + ++ ++ +L + + +Q Sbjct: 427 DEYLKAAADMFERTSPAWAPWQVI-ATNNKEAARIQVLEGILKKLQ 471 >gi|227821186|ref|YP_002825156.1| adenylate kinase [Sinorhizobium fredii NGR234] gi|227340185|gb|ACP24403.1| adenylate kinase [Sinorhizobium fredii NGR234] Length = 194 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 37/214 (17%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G GAGK T L ++YD+ + R + + A+ Sbjct: 5 VLLGPPGAGKGTQAERLV-----RDYDLLHIS------TGDLLRDAIKAQSPLGRKAK-- 51 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDR-----FLDSSYAYQGERDSSQHLFLDSLQE 122 A V + + L+E + L D+ F+ + + + L+S+Q Sbjct: 52 ---MAVDEGKLVPDEVVVGLVEER--LTDKEPGQGFILDGFPRTIAQAGALERLLESMQ- 105 Query: 123 ISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +P D I+ D+P+ + +R+ R SA + +KR + F Sbjct: 106 ------VPLDHVILFDIPIRLLEERIAKRAEQTRSAGAQPRTDDSPEVLKKRIEEFARAT 159 Query: 182 R------NQPDRCHIVDSAHSFQSVATNILNIVW 209 Q VD++ + VAT I + + Sbjct: 160 AALSPFYEQNGLLRRVDASEDIERVATQIRDFLQ 193 >gi|221059752|ref|XP_002260521.1| XPA binding protein 1 [Plasmodium knowlesi strain H] gi|193810595|emb|CAQ42493.1| XPA binding protein 1, putative [Plasmodium knowlesi strain H] Length = 495 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 13/102 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54 I G+ G+GKTT++ L +L+ + V + P ++ + ++ Sbjct: 205 IVI-GMAGSGKTTYVGSLYNYLKVEKKKKVYTMNLDPAVKYLQYPVNIDIRDSIKYHEIM 263 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + GA + A R D V ++ + ++ D Sbjct: 264 KEYKLGPNGAIMTCLNLFATRFDKVIEILEKRKKKLHYIIVD 305 >gi|190150618|ref|YP_001969143.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303250620|ref|ZP_07336817.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307263964|ref|ZP_07545566.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|226741844|sp|B3H271|KAD_ACTP7 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|189915749|gb|ACE62001.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302650608|gb|EFL80767.1| adenylate kinase [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306870698|gb|EFN02440.1| Adenylate kinase [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 214 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 72/234 (30%), Gaps = 55/234 (23%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T + T + R + E G +A Sbjct: 3 IILLGAPGAGKGTQAQFIMNKF---GIPQIST--------GDMFRAAIKEG--TELGKQA 49 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 +A++ V + + AL++ +I D + + G + D+L++ Sbjct: 50 KALM---DEGKLVPDELTVALVKDRIAQPD--CANGFLLDGFPRTIPQA--DALKD---S 99 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRY-------------------SLRESACLDYFERKD- 166 V D + D+ ++ ++R+ R + D R+D Sbjct: 100 GVKIDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDD 159 Query: 167 ---------VMIHEKRR---QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + H++ + + A R +D + V+ + I+ Sbjct: 160 KPETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKIL 213 >gi|184156011|ref|YP_001844351.1| deoxyguanosine kinase [Lactobacillus fermentum IFO 3956] gi|227515462|ref|ZP_03945511.1| deoxyguanosine kinase [Lactobacillus fermentum ATCC 14931] gi|260662733|ref|ZP_05863627.1| deoxyguanosine kinase [Lactobacillus fermentum 28-3-CHN] gi|183227355|dbj|BAG27871.1| deoxyguanosine kinase [Lactobacillus fermentum IFO 3956] gi|227086176|gb|EEI21488.1| deoxyguanosine kinase [Lactobacillus fermentum ATCC 14931] gi|260552814|gb|EEX25813.1| deoxyguanosine kinase [Lactobacillus fermentum 28-3-CHN] Length = 213 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 69/233 (29%), Gaps = 44/233 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGKT+ +L L K P + L ++G Sbjct: 2 IVLAGTIGAGKTSLTQMLADHLGSK---------PFFESVDDNPILPLFYKDPQKYGFLL 52 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----------------AYQGE 108 + F RLD +++ L + DR F D+ Y Sbjct: 53 QIY-FLNRRLDEIKDSFDNDLN-----VLDRSIFEDALMFKMNADLGRATHTEADIYTSL 106 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + D + + P+ I + + + L R++ R E D Sbjct: 107 LGNMMEELPDQAHQKA-----PNLLIHIRVSFETMLNRIKQRGRSFEQIENDP---SLYQ 158 Query: 169 IHEKRRQIFLDIARNQPDRCH-IVDSAHSFQSVAT-NILNIVWELVQKRVSPL 219 ++ Q + ++D + VA +V E + ++S L Sbjct: 159 YYKTLNQRYQSWYEAYDKSPKMMIDGDQ-YDFVADPQAAKVVLEQIDSKLSAL 210 >gi|166220145|sp|Q4A6Q8|KCY_MYCS5 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|144574978|gb|AAZ43563.2| cytidylate kinase [Mycoplasma synoviae 53] Length = 218 Score = 38.5 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 80/226 (35%), Gaps = 37/226 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDEF 62 I+ +G G GK+T L+ + L T G+ A HV+ + + Sbjct: 7 IAIDGPSGVGKSTVSKLIAKKLN-------YTFINSGSIYRTIAYHVIKNDIDINNEKDV 59 Query: 63 GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD---------R-FLDSSYAYQGER 109 + +++ F+ ++ + + I L +I + R F+ S Q Sbjct: 60 ISSLDSLEFSLSKNEELFYKGENITLILRSEQISISTPVVSKIPEVREFVTSYI--QKMT 117 Query: 110 DSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDI-GLKRVQNRYSLRESACLDY--FER 164 + +D + +VMP D I L + +RV + L ++ D +E Sbjct: 118 KGKKGFIIDG--RDTTFKVMPHADVKIFLWATAEERAQRRVDQNHQLGYNSNYDEVLYEI 175 Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVW 209 K + R+ D D ++D + V I++++ Sbjct: 176 KKRDHQDMNRE--HDPLHKTEDSI-LIDCTNMKIDEVVNKIISLIK 218 >gi|195579814|ref|XP_002079754.1| GD21850 [Drosophila simulans] gi|194191763|gb|EDX05339.1| GD21850 [Drosophila simulans] Length = 4107 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 24/117 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G GK+T ISLLK+ L VH + R L ++ Sbjct: 1948 VVLVGPPGCGKSTIISLLKQALCGNQLKVHTISPKSMSRIQLLGR---LDADTRQWQDG- 2003 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A V P+ ++CD S ++++L + Sbjct: 2004 -VLTHTA-----VAVNQEPS-QVHSWIVCD-------------GSIDPEWIEALNSV 2040 >gi|118355130|ref|XP_001010826.1| hypothetical protein TTHERM_00122300 [Tetrahymena thermophila] gi|89292593|gb|EAR90581.1| hypothetical protein TTHERM_00122300 [Tetrahymena thermophila SB210] Length = 352 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 3/102 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDEFG 63 I+ G GKT+ ++ L ++ + V +T E A A +L V++F Sbjct: 7 IALTGGPCGGKTSAMNYLHSQFKKWGFTVFMTPEAFTVTAQGHAHELYGILKQQDVNDFC 66 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 I + + + IL CDR + + AY Sbjct: 67 KLGAKITNLCYFFEEYFEDLAKLSKKPTILFCDRGICDTKAY 108 >gi|83720017|ref|YP_441859.1| deoxynucleoside kinase family protein [Burkholderia thailandensis E264] gi|83653842|gb|ABC37905.1| deoxynucleoside kinase family protein [Burkholderia thailandensis E264] Length = 241 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 47/179 (26%), Gaps = 51/179 (28%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 +++ EG G GKTT +LL + + P P E Sbjct: 32 RYLAIEGPIGVGKTTLATLLAERWSMR----ALLERPQDNPFLE---RFYRDTARYALPT 84 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A + + I A ++ D F+ EI Sbjct: 85 Q----LAFALQRERQAGEIAAAYEANMPIVAD-------------------FMPQKNEIF 121 Query: 125 VQEVMPD---------------------CTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 + +PD + L ++ R+Q R E D + Sbjct: 122 ARLTLPDDEWQLYRSLAAHLAAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAY 180 >gi|89896557|ref|YP_520044.1| hypothetical protein DSY3811 [Desulfitobacterium hafniense Y51] gi|89336005|dbj|BAE85600.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 617 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH 52 I+ G GAGKTT I+LL RF + ++ + GTP ++ R Sbjct: 407 IAIVGPTGAGKTTIINLLMRFYELDGGEILI----DGTPISQVHRE 448 >gi|116754798|ref|YP_843916.1| adenylate kinases [Methanosaeta thermophila PT] gi|121693062|sp|A0B9A2|KAD_METTP RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|116666249|gb|ABK15276.1| Adenylate kinase [Methanosaeta thermophila PT] Length = 215 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 50/156 (32%), Gaps = 41/156 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T ++ K+ + R + + E G EA Sbjct: 3 IVLLGPPGSGKGTQAKMIAEKFNVKHI-----------STGDILREHVRNG--TELGKEA 49 Query: 67 EAIVFAAARLDHVEN-----VIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + V + +I+ L + + Y G + Sbjct: 50 KKYM---DAGQLVPDSILIGIIKDRLSKPDV-------AGGYMLDGYPRTIPQAE----- 94 Query: 122 EISVQEVMP------DCTIILDLPVDIGLKRVQNRY 151 ++ +++P D + +D+P + ++R+ R Sbjct: 95 --ALDKILPELKQKIDVVLNIDVPDEELVRRLSGRR 128 >gi|116754349|ref|YP_843467.1| adenylylsulfate kinase [Methanosaeta thermophila PT] gi|116665800|gb|ABK14827.1| adenylylsulfate kinase [Methanosaeta thermophila PT] Length = 178 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 30/144 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G GKTT K L R V + + R V+ + E Sbjct: 7 FTGLPGCGKTTIARRTKEHLSRMGVKVKILE-------LDEIRRVV--TPNPRYTDEERD 57 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 IV+A+ + + + G ++ D R + L ++ + Sbjct: 58 IVYAS-----LAYMAKLLCDAGVNVIID--------ATANRRRYRDLARKLVERFAE--- 101 Query: 129 MPDCTIILDLPVDIGLKRVQNRYS 152 + + P+D+ ++R R + Sbjct: 102 -----VYIKAPLDVCMEREALRKA 120 >gi|328464201|gb|EGF35655.1| cobalt transport ATP-binding protein [Lactobacillus helveticus MTCC 5463] Length = 554 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN 32 G FI G G+GKTT ++ LK+ L K Sbjct: 32 GDFIVIAGNTGSGKTTLLNHLKKELMPKG 60 >gi|324327229|gb|ADY22489.1| cobalt ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 551 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 28/87 (32%), Gaps = 10/87 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G FI G G+GKTT + K+ L T G LL D Sbjct: 30 QKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPDL 79 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALM 88 A+ +VF V + + L Sbjct: 80 LSAQEIGMVFQNPENQLVMDTVIQELA 106 >gi|309789896|ref|ZP_07684473.1| cytidylate kinase [Oscillochloris trichoides DG6] gi|308228028|gb|EFO81679.1| cytidylate kinase [Oscillochloris trichoides DG6] Length = 222 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 16/28 (57%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL 28 M L I+ +G GAGK+T +LL L Sbjct: 1 MQQPLVITIDGPAGAGKSTLGALLAERL 28 >gi|298291459|ref|YP_003693398.1| adenylate kinase [Starkeya novella DSM 506] gi|296927970|gb|ADH88779.1| adenylate kinase [Starkeya novella DSM 506] Length = 194 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 65/212 (30%), Gaps = 39/212 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T L R T + R + + A+A Sbjct: 7 GPPGAGKGTQAQRLVA---RHGIVQLST--------GDMLREAVRNGTPVGLRAKA---- 51 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSLQEI-SVQE 127 V + I ++ DR D S + + ++L I + + Sbjct: 52 -VMDAGQLVSDDIVIG------IISDRIDQPDCSKGFILDGFPRTVAQAEALDSILAEKG 104 Query: 128 VMPDCTIILDLP----VDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD---- 179 + D I L + VD L+R + + E D D ++ + R + + Sbjct: 105 LKLDAVIELKVDQAKLVDRILQRARETAARGEPVRKD----DDPVVFKTRLEAYNRDTAV 160 Query: 180 IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209 +A +R +D V I +++ Sbjct: 161 VAPYYAERGLLVAIDGMRPIDEVTQAISDVLE 192 >gi|317052568|ref|YP_004113684.1| guanylate kinase [Desulfurispirillum indicum S5] gi|316947652|gb|ADU67128.1| guanylate kinase [Desulfurispirillum indicum S5] Length = 212 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 40/231 (17%), Positives = 76/231 (32%), Gaps = 41/231 (17%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDE 61 SG + GAGKTT +L + + + H TRE + Sbjct: 6 SGNILVLTAPSGAGKTTLSRMLVQRYPQCQLSISHTTREARPGEVNGRDYFFVELDEFLS 65 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E + + +A ++ + A+ +G +L D YQG Sbjct: 66 MIQEGKFLEYATVHGNYYGTSFQYLYQAMEQGMNVLLD------IDYQGA---------- 109 Query: 119 SLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 +++ MP+ ++ LP + +R+ +R + + + I + Sbjct: 110 ----FQLKKKMPEAILVFILPPSLEDLRERLTSRGRDDDEVVKLRLQNAEEEILQ--YSH 163 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIV--WELVQKRVSPLSSKKDI 225 F +V+ + + +I+ EL + R PLS DI Sbjct: 164 FD---------YVVVN--EDLEQAYEQLASILTAEELRKNRRRPLSELADI 203 >gi|227524163|ref|ZP_03954212.1| ABC superfamily ATP binding cassette transporter ATPase [Lactobacillus hilgardii ATCC 8290] gi|227088671|gb|EEI23983.1| ABC superfamily ATP binding cassette transporter ATPase [Lactobacillus hilgardii ATCC 8290] Length = 554 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 14/29 (48%), Positives = 17/29 (58%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN 32 G FI G G+GKTT ++ LKR L K Sbjct: 32 GDFIVIAGNTGSGKTTLLNHLKRELMPKG 60 >gi|289581353|ref|YP_003479819.1| hypothetical protein Nmag_1681 [Natrialba magadii ATCC 43099] gi|289530906|gb|ADD05257.1| conserved hypothetical protein [Natrialba magadii ATCC 43099] Length = 166 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 43/208 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M+ I + G+ G GK+ + + Y + R L Sbjct: 1 MSRATLIVYCGLPGVGKSAASGYTAEQIDAERYR------------TDQVRKQLF-PDPS 47 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + A D + + AL G ++ D +Q Q + Sbjct: 48 YTPEETD------ATYDALLECAQSALESGSNVVLD------ATFQSRPHREQATAMADE 95 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + + +D +D+ +R++ R A FE+ H + R+ F I Sbjct: 96 TGVDCEF------VYVDCNLDVVKERIEERTDTISDAQ---FEQ-----HLQLRETFDSI 141 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 R+ +VD++ + + I V Sbjct: 142 ERDH----VVVDNSGTLEETYRQIDEHV 165 >gi|229586415|ref|YP_002844916.1| Signal recognition particle protein [Rickettsia africae ESF-5] gi|228021465|gb|ACP53173.1| Signal recognition particle protein [Rickettsia africae ESF-5] Length = 449 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT S L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152 >gi|147677112|ref|YP_001211327.1| ABC-type multidrug transport system, ATPase component [Pelotomaculum thermopropionicum SI] gi|146273209|dbj|BAF58958.1| ABC-type multidrug transport system, ATPase component [Pelotomaculum thermopropionicum SI] Length = 323 Score = 38.5 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 72/203 (35%), Gaps = 31/203 (15%) Query: 9 FEGIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 F G GAGK+T I +L L + YDV V +D Sbjct: 34 FLGPNGAGKSTTIKILSTLLKPTSGKAELAGYDVVAHPNEVRRSIG----MVFQDPSLDN 89 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEG-KIL-LCDRFLDSSYAYQGERDSSQHLFLDS 119 E ++F A + N+IRP + + +I+ L DR S + L Sbjct: 90 RLTAEENLLFHAMLYNVPANLIRPRIDQVLEIVDLADR--RRSLVKTFSGGMKRRL---- 143 Query: 120 LQEISVQEV-MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 EI+ + P + LD GL Q R ++ E E + + ++ Sbjct: 144 --EIARGLLHRP-KVLFLD-EPTAGLD-PQTRNAIWEHVRKLRDE-TGITVFMTTH--YM 195 Query: 179 DIARNQPDRCHIVD--SAHSFQS 199 D A N DR ++D + + S Sbjct: 196 DEAENC-DRIAVIDHGAIQAIDS 217 >gi|315647646|ref|ZP_07900748.1| phosphonates transport system [Paenibacillus vortex V453] gi|315277085|gb|EFU40426.1| phosphonates transport system [Paenibacillus vortex V453] Length = 208 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 + G F+ G GAGK+T + L R ++ N + E + R + G+ Sbjct: 27 IRPGEFVVVIGPSGAGKSTLLRSLNRMIEPTNGKIRFKGEETMGIKGKKLREMRRHMGM 85 >gi|307310380|ref|ZP_07590028.1| uncharacterized ATP-binding protein YghS [Escherichia coli W] gi|306909275|gb|EFN39770.1| uncharacterized ATP-binding protein YghS [Escherichia coli W] gi|315062304|gb|ADT76631.1| predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli W] gi|323377111|gb|ADX49379.1| uncharacterized ATP-binding protein YghS [Escherichia coli KO11] Length = 232 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 67/246 (27%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELAARMPAEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ + +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225 Query: 207 IVWELV 212 + + Sbjct: 226 AIHAAL 231 >gi|293383928|ref|ZP_06629829.1| putative kinase [Enterococcus faecalis R712] gi|293387444|ref|ZP_06631998.1| putative kinase [Enterococcus faecalis S613] gi|312908041|ref|ZP_07767023.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|312910799|ref|ZP_07769636.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] gi|291078688|gb|EFE16052.1| putative kinase [Enterococcus faecalis R712] gi|291083166|gb|EFE20129.1| putative kinase [Enterococcus faecalis S613] gi|310625929|gb|EFQ09212.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 512] gi|311288943|gb|EFQ67499.1| conserved hypothetical protein [Enterococcus faecalis DAPTO 516] Length = 188 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 47/156 (30%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT L + L+ + + + R +L + Sbjct: 28 KLIILRGNSGSGKTTIAKALHQCLKEQ----------SLLISQDVVRREMLRVKDETGNI 77 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + ++ E + ++ + +Q S + L E + Sbjct: 78 SIALF----------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 122 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 151 >gi|281412249|ref|YP_003346328.1| ABC transporter related protein [Thermotoga naphthophila RKU-10] gi|281373352|gb|ADA66914.1| ABC transporter related protein [Thermotoga naphthophila RKU-10] Length = 258 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 G I+ G GAGK+T + + L+ + ++ Sbjct: 25 RKGELIAILGPNGAGKSTLLKCVAGILKCQGVEIF 59 >gi|225010463|ref|ZP_03700934.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-3C] gi|225005292|gb|EEG43243.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-3C] Length = 204 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 58/188 (30%), Gaps = 30/188 (15%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT LL + E + L ++ E + Sbjct: 10 GAGKTTLTQLLSKH------------YNWDAHFEEVEDNPYLDDFYNQM--ERWSFNLQI 55 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEISVQ 126 L+ I GK ++ DR + D+ + G + L E+ + Sbjct: 56 FFLNSRYRQILEIRESGKNIIQDRTIYEDAFIFAPNLHAMGLMTNRDFNNYKQLFELMEK 115 Query: 127 EVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 V P+ I L V + ++Q R E+ + + + + A Sbjct: 116 LVQPPELVIYLRSSVPNLVSQIQKRGREYENTI-------SIDYLSRLNERYEAWAHGYT 168 Query: 186 D-RCHIVD 192 + + ++D Sbjct: 169 NSKLLVID 176 >gi|210134357|ref|YP_002300796.1| shikimate kinase [Helicobacter pylori P12] gi|238058101|sp|B6JPQ5|AROK_HELP2 RecName: Full=Shikimate kinase; Short=SK gi|210132325|gb|ACJ07316.1| shikimic acid kinase I [Helicobacter pylori P12] Length = 162 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ L L+ +V T + R + G D F +F Sbjct: 11 GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 +D ++ + P ++ + D+L+ + T Sbjct: 62 NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 L + + +KR+ + + D + K++ EKR+ ++ A I+D+ Sbjct: 95 FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146 Query: 194 AHSFQSVATNILNIV 208 + +L + Sbjct: 147 RGGLNNSLKQVLQFI 161 >gi|190409797|gb|EDV13062.1| uridylate kinase [Saccharomyces cerevisiae RM11-1a] gi|207343455|gb|EDZ70909.1| YKL024Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 204 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 61/215 (28%), Gaps = 46/215 (21%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T L + L + + G+ E ++ + + + Sbjct: 23 GGPGAGKGTQCEKLVKDYSFVHLSA-GDLLRAEQGRAGSQYGELIKNCIKEG---QIVPQ 78 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSS-YAYQGERDSSQHLFLDSLQEI 123 + + N I + K L D F A ERD + F+ Sbjct: 79 EITL-------ALLRNAISDNIKANKHKFLIDGFPRKMDQAISFERDIVESKFI------ 125 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH------EKRRQIF 177 + D P DI L+R+ R D E + + F Sbjct: 126 ----------LFFDCPEDIMLERLLERGKT-SGRSDDNIESIKKRFYTFKETSMPVIEYF 174 Query: 178 LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + V S + V ++ + + + + Sbjct: 175 ET-----KSKVVRVRCDRSVEDVYKDVQDAIRDRL 204 >gi|170683870|ref|YP_001746672.1| D-gluconate kinase [Escherichia coli SMS-3-5] gi|170521588|gb|ACB19766.1| thermosensitive gluconokinase [Escherichia coli SMS-3-5] Length = 187 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + LD + L R+Q R L FE L+ + + Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149 Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216 D H +V V + Q R+ Sbjct: 150 DINHDIANVTEQCRQAVLAIRQDRI 174 >gi|163783395|ref|ZP_02178387.1| putative ATP/GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] gi|159881317|gb|EDP74829.1| putative ATP/GTP-binding protein [Hydrogenivirga sp. 128-5-R1-1] Length = 1181 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+ G G+GK+T + LL + L KN ++ + + R L + Sbjct: 48 KGGKAIALIGPWGSGKSTVVKLLDKEL-DKNKNITLFIFDAWGHHGDPLRRSFLKQLIRH 106 Query: 62 FGAEAEA 68 +A Sbjct: 107 LKGKAWL 113 >gi|51518070|ref|YP_067998.1| BXLF1 [Macacine herpesvirus 4] gi|18025521|gb|AAK95465.1| BXLF1 [Macacine herpesvirus 4] Length = 607 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 63/194 (32%), Gaps = 32/194 (16%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSC------GVD 60 EG G GKTT ++ LK V EP T E A + G + Sbjct: 289 LEGAPGVGKTTMLNHLKAVF---GDLTIVVPEPMRYWTHVYENAIKAMHKNVTRARQGRE 345 Query: 61 EFGAEAEAIVF--------AAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQ--G 107 + AE A A+R + E+ RP +L DR L S+ Sbjct: 346 DTSAEVLACQMKFTTPFRVLASRKRSLLSTESGARPVAPLDCWILHDRHLLSASVVFPLM 405 Query: 108 ERDSSQHLFLDSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + D +Q ++ P D + + L + L+R++ R ES D Sbjct: 406 LLRGQLLSYSDFIQILATFTADPGDTIVWMKLNGEENLRRLKKRGRKHESGP-------D 458 Query: 167 VMIHEKRRQIFLDI 180 + + + Sbjct: 459 AGYLKSVNDAYHAV 472 >gi|327469234|gb|EGF14706.1| ABC superfamily ATP binding cassette transporter, ABC protein [Streptococcus sanguinis SK330] Length = 247 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 21/38 (55%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 + G FIS GI G+GKTT + + L+ + V + R Sbjct: 36 SRGEFISILGISGSGKTTLLKCISSLLKPTSGKVMLNR 73 >gi|296284886|ref|ZP_06862884.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Citromicrobium bathyomarinum JL354] Length = 642 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 38/143 (26%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + +++ L N LL G + Sbjct: 477 FTGLSGSGKSTIANAVEKKLALMNRHTF-----------------LLDGDNVRHGLNKDL 519 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL--QEI 123 A R++++ V + G I+L A+ + + + D L E Sbjct: 520 GFTEADRIENIRRIGEVAKLMADAGLIVLT--------AFISPFRAERKMVRDMLPEGEF 571 Query: 124 SVQEVMPDCTIILDLPVDIGLKR 146 I +D P+++ +R Sbjct: 572 VE--------IFVDTPLEVAEER 586 >gi|295706525|ref|YP_003599600.1| LAO/AO transport system ATPase [Bacillus megaterium DSM 319] gi|294804184|gb|ADF41250.1| LAO/AO transport system ATPase [Bacillus megaterium DSM 319] Length = 331 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60 I F G+ GAGK+T I +L + + V + +P GG+ + R LL+ + Sbjct: 56 IGFTGVPGAGKSTLIDKFGSYLCKNGHSVAVLAVDPSSTLSGGSILGDKTRMELLTKQEN 115 Query: 61 EF 62 F Sbjct: 116 AF 117 >gi|294501178|ref|YP_003564878.1| LAO/AO transport system ATPase [Bacillus megaterium QM B1551] gi|294351115|gb|ADE71444.1| LAO/AO transport system ATPase [Bacillus megaterium QM B1551] Length = 331 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60 I F G+ GAGK+T I +L + + V + +P GG+ + R LL+ + Sbjct: 56 IGFTGVPGAGKSTLIDKFGSYLCKNGHSVAVLAVDPSSTLSGGSILGDKTRMELLTKQEN 115 Query: 61 EF 62 F Sbjct: 116 AF 117 >gi|317128560|ref|YP_004094842.1| cytidylate kinase [Bacillus cellulosilyticus DSM 2522] gi|315473508|gb|ADU30111.1| cytidylate kinase [Bacillus cellulosilyticus DSM 2522] Length = 228 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 24/75 (32%), Gaps = 9/75 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT---------REPGGTPAAEAARHVLLSC 57 I+ +G GAGK+T ++ L D +E E +L Sbjct: 7 IAIDGPAGAGKSTVAKMVAEKLSFIYIDTGAMYRALTYEALKENVEISNGEKLIDLLKKT 66 Query: 58 GVDEFGAEAEAIVFA 72 ++ + ++ Sbjct: 67 SIELINKSGKQLIML 81 >gi|269215385|ref|ZP_06159239.1| cytidylate kinase [Slackia exigua ATCC 700122] gi|269130872|gb|EEZ61947.1| cytidylate kinase [Slackia exigua ATCC 700122] Length = 226 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL 28 + I+ +G GAGK+T + + L Sbjct: 1 MIIAIDGPSGAGKSTVAKAVAKRL 24 >gi|255646419|gb|ACU23688.1| unknown [Glycine max] Length = 296 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 38/150 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L R L K + R + Sbjct: 117 QKGCVIWLTGLSGSGKSTLACALSRSLHSKGK-------LTYILDGDNIR----HGLNRD 165 Query: 62 FGAEAEAIVFAAARLDHVENVIRP-ALMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDS 119 AE R +++ + L+ ++C + S + Y+ +RD Sbjct: 166 LSFRAE------DRSENIRRIGEVSKLLADAGVIC---IASLISPYRKDRD--------- 207 Query: 120 LQEISVQEVMP--DCT-IILDLPVDIGLKR 146 + + ++P D + +D+P+D+ R Sbjct: 208 ----ACRALLPEGDFIEVFIDVPLDVCEAR 233 >gi|313127491|ref|YP_004037761.1| ATPase, pilt family [Halogeometricum borinquense DSM 11551] gi|312293856|gb|ADQ68316.1| ATPase, PilT family [Halogeometricum borinquense DSM 11551] Length = 615 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 G+ IS G GAGK+T + FL +Y V +P Sbjct: 259 QRGVLIS--GSPGAGKSTFAQAVAEFLNESDYAVKTMEKPRDLQVGPEI 305 >gi|225466557|ref|XP_002271740.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 154 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 28/145 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L R L + + R + Sbjct: 23 QKGCVIWITGLSGSGKSTLACALSRALHSRG-------NLTYVLDGDNVR----HGLNRD 71 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 AE R +++ + A + F DS S D+ + Sbjct: 72 LSFRAE------DRAENIRRIGEVAKL---------FSDSGIICIASLISPYRKDRDACR 116 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 + + + +D+P+++ +R Sbjct: 117 AMLSEGNF--IEVFMDIPLEVCEER 139 >gi|71894166|ref|YP_278274.1| cytidylate kinase [Mycoplasma synoviae 53] Length = 220 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 80/226 (35%), Gaps = 37/226 (16%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS----CGVDEF 62 I+ +G G GK+T L+ + L T G+ A HV+ + + Sbjct: 9 IAIDGPSGVGKSTVSKLIAKKLN-------YTFINSGSIYRTIAYHVIKNDIDINNEKDV 61 Query: 63 GAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCD---------R-FLDSSYAYQGER 109 + +++ F+ ++ + + I L +I + R F+ S Q Sbjct: 62 ISSLDSLEFSLSKNEELFYKGENITLILRSEQISISTPVVSKIPEVREFVTSYI--QKMT 119 Query: 110 DSSQHLFLDSLQEISVQEVMP--DCTIILDLPVDI-GLKRVQNRYSLRESACLDY--FER 164 + +D + +VMP D I L + +RV + L ++ D +E Sbjct: 120 KGKKGFIIDG--RDTTFKVMPHADVKIFLWATAEERAQRRVDQNHQLGYNSNYDEVLYEI 177 Query: 165 KDVMIHEKRRQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVW 209 K + R+ D D ++D + V I++++ Sbjct: 178 KKRDHQDMNRE--HDPLHKTEDSI-LIDCTNMKIDEVVNKIISLIK 220 >gi|77461558|ref|YP_351065.1| signal recognition particle-docking protein FtsY [Pseudomonas fluorescens Pf0-1] gi|77385561|gb|ABA77074.1| cell division protein [Pseudomonas fluorescens Pf0-1] Length = 515 Score = 38.5 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + ++ A+ Sbjct: 316 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 371 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 372 TGADSASVIFDAVQAAKARGIDVLIAD 398 >gi|330812382|ref|YP_004356844.1| putative signal recognition particle receptor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380490|gb|AEA71840.1| putative signal recognition particle receptor [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 477 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + ++ A+ Sbjct: 278 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNKIPVIAQH-- 333 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 334 TGADSASVIFDAVQAAKARGIDVLIAD 360 >gi|257093467|ref|YP_003167108.1| hypothetical protein CAP2UW1_1882 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045991|gb|ACV35179.1| hypothetical protein CAP2UW1_1882 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 537 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 67/210 (31%), Gaps = 49/210 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA--RHVLLSCGVDEFGAEAEAIVF 71 G+GK++ I LK + AE R VLL E Sbjct: 344 GSGKSSVIQHLKSL----------------STLAEWVDQRPVLLERPHTALSDE------ 381 Query: 72 AAARLD-------HVENVIRPALMEGKILL-CDRFLDSSYAYQGERDSSQH--LFLDSLQ 121 R + L +LL CDR + D + L LQ Sbjct: 382 --DRREVDHWVSTQFRRKNFRLLTNKDLLLACDRTPLDPLVFAEVADVPRRAKEHLGVLQ 439 Query: 122 EISVQE-VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + E ++P ++L + + R + R+ + A LDY ++ ++ F+ + Sbjct: 440 PNATGERLVPGHIVLLTASAEELMARAKERH---KGATLDYLRQQ--------QERFIQL 488 Query: 181 ARNQPDRCHIVD-SAHSFQSVATNILNIVW 209 P + S+ SV + I+ Sbjct: 489 FGPDPKAITELSTSSRPLASVVRAVCKIIH 518 >gi|254805877|ref|YP_003084098.1| signal recognition particle protein [Neisseria meningitidis alpha14] gi|254669419|emb|CBA08634.1| signal recognition particle protein [Neisseria meningitidis alpha14] Length = 421 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 21/134 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q V + G AAR L + G E Sbjct: 228 GINGAGKTTSIGKLAKYFQAHGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 282 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 + ++ A G I+L D R +Q ++ ++++ +Q+ Sbjct: 283 TTGDSAAVCFDAVQAAKARGIDIVLAD---------TAGRLPTQLHLMEEIKKVKRVLQK 333 Query: 128 VMPD----CTIILD 137 MPD ++LD Sbjct: 334 AMPDAPHEIIVVLD 347 >gi|207092252|ref|ZP_03240039.1| adenylate kinase [Helicobacter pylori HPKX_438_AG0C1] Length = 191 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q L+ Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQAL-----DKELN 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 + E+ ++ V + V++ + R R D + + H + R +FL Sbjct: 105 AQNEVILKSV---------IEVEVSENTAKERVLGRSRGADD----NERVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVGEMQKYILSF 189 >gi|188585955|ref|YP_001917500.1| guanylate kinase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350642|gb|ACB84912.1| guanylate kinase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 204 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 31/169 (18%), Positives = 52/169 (30%), Gaps = 27/169 (15%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M GL + G G GK T L Y + TR P + + Sbjct: 1 MKKEGLLVVLSGPSGVGKGTICDHLLDKYSDLEYSISMTTRSPRAGEIHGEDYYFVSKSE 60 Query: 59 VDEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E A+ E + +A ++ + L EGK ++ + +D A Q ++ Sbjct: 61 FQEMIADDEFLEWAEVFGNYYGTPRKFVNSKLREGKSVVLE--IDIQGALQVKQRCPNG- 117 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 I LP D KR++ R + ++ Sbjct: 118 -----------------VFIFLLPPSLDELHKRIRKRGTEQDKDMQTRL 149 >gi|167771709|ref|ZP_02443762.1| hypothetical protein ANACOL_03081 [Anaerotruncus colihominis DSM 17241] gi|167666349|gb|EDS10479.1| hypothetical protein ANACOL_03081 [Anaerotruncus colihominis DSM 17241] Length = 281 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 15/143 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV-LLSCG 58 M G F+ G G GKTT + + FL + + ++ E AR + + Sbjct: 24 MEKGEFVCVLGANGCGKTTLLKSILAFLTPQHGQVLLYGKDIHQMDERERARKIAYIPQY 83 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL-------DSSYAYQGERDS 111 V R H+ + RP + + + D + ++ +Y Sbjct: 84 HTPPFPFTVRDVVLMGRTPHLSRICRPTEKDCR--IADESMERLGIAHYANKSYTALSGG 141 Query: 112 SQHLFLDSLQEISVQEVMPDCTI 134 + + + + + ++ Q PD I Sbjct: 142 QRQMVVIA-RALAQQ---PDLLI 160 >gi|161508121|ref|YP_001578089.1| cobalt transport ATP-binding protein [Lactobacillus helveticus DPC 4571] gi|160349110|gb|ABX27784.1| Cobalt transport ATP-binding protein [Lactobacillus helveticus DPC 4571] Length = 576 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKN 32 G FI G G+GKTT ++ LK+ L K Sbjct: 54 GDFIVIAGNTGSGKTTLLNHLKKELMPKG 82 >gi|116251089|ref|YP_766927.1| hypothetical protein RL1320A [Rhizobium leguminosarum bv. viciae 3841] gi|115255737|emb|CAK06818.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 169 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 15/31 (48%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 + I F G+ G+GKTT L L + V Sbjct: 1 MLIIFGGLPGSGKTTIARALAERLNAVHVRV 31 >gi|154174572|ref|YP_001407898.1| adenylate kinase [Campylobacter curvus 525.92] gi|166980308|sp|A7GXF6|KAD_CAMC5 RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|112803401|gb|EAU00745.1| adenylate kinase (ATP-AMP transphosphorylase) [Campylobacter curvus 525.92] Length = 188 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 74/222 (33%), Gaps = 45/222 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP------GGTPAAEAARHVL 54 M I G G+GKTT SL+ + + Y T + G+ + + Sbjct: 1 MKKLFLII--GAPGSGKTTDASLIAK--EDDKYAHFSTGDLLRAEVASGSELGKKIDSFI 56 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSS 112 + + V N I A+ E ++ D + S E+ + Sbjct: 57 SKGNLVPL--------------EVVVNAIISAIKGSEKSNIIIDGYPRS-----VEQMTE 97 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL---DYFERKDVMI 169 L + EI+++ I +D+ I +RV R + + + + Sbjct: 98 LDKVLSAQNEINLRG-----VIEVDVSEAIARERVLGRARGADDNNEVFNNRM-KVYLDP 151 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 E R+ + + H+V+ + + + +I ++ L Sbjct: 152 IEAIRKFY-----KGKNLLHVVNGERTIEPIVADIKKLIENL 188 >gi|49479581|ref|YP_037014.1| hypothetical protein BT9727_2690 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331137|gb|AAT61783.1| hypothetical protein BT9727_2690 [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 282 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLISDILSQNKIEVELFLE 39 >gi|58337010|ref|YP_193595.1| excinuclease subunit A [Lactobacillus acidophilus NCFM] gi|227903572|ref|ZP_04021377.1| excinuclease subunit A [Lactobacillus acidophilus ATCC 4796] gi|58254327|gb|AAV42564.1| excinuclease subunit A [Lactobacillus acidophilus NCFM] gi|227868459|gb|EEJ75880.1| excinuclease subunit A [Lactobacillus acidophilus ATCC 4796] Length = 946 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRALAQK 656 >gi|15892137|ref|NP_359851.1| signal recognition particle protein [Rickettsia conorii str. Malish 7] gi|28380155|sp|Q92J55|SRP54_RICCN RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog gi|15619266|gb|AAL02752.1| signal recognition particle protein [Rickettsia conorii str. Malish 7] Length = 449 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT S L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152 >gi|34580832|ref|ZP_00142312.1| signal recognition particle protein [Rickettsia sibirica 246] gi|28262217|gb|EAA25721.1| signal recognition particle protein [Rickettsia sibirica 246] Length = 449 Score = 38.5 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT S L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152 >gi|325111184|ref|YP_004272252.1| sulfate-transporting ATPase [Planctomyces brasiliensis DSM 5305] gi|324971452|gb|ADY62230.1| Sulfate-transporting ATPase [Planctomyces brasiliensis DSM 5305] Length = 308 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 22/165 (13%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVD 60 FI G G+GKTT + ++ L + +V + T AE R ++ D Sbjct: 32 FI---GPNGSGKTTTMRMIATLLNPDYGEAYVCGKSIYT-HAEEIRRLVGFMPDFFGVYD 87 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDS 119 + FAA + R + E K+ L D F + Q R +Q + L Sbjct: 88 DMTVLEYLEFFAA--TYRINGPNRRKICEEKLELVDMSFKRDAMVSQLSRGQTQRIGLA- 144 Query: 120 LQEISVQEVMPDCTIILDLPVDIGL---KRVQNRYSLRESACLDY 161 + + + ++LD GL R++ R L+ ++ Sbjct: 145 --RVMLHDPQ---VLLLD-EPASGLDPRARIEIRNLLKRLGAMNK 183 >gi|288930679|ref|YP_003434739.1| PilT protein domain protein [Ferroglobus placidus DSM 10642] gi|288892927|gb|ADC64464.1| PilT protein domain protein [Ferroglobus placidus DSM 10642] Length = 593 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+ G GAGK+T + + +L Y V P + + + Sbjct: 259 QRGILIA--GPPGAGKSTFAASIANYLMENGYMVKTMESPRDLMVRDEITQY--APLEGD 314 Query: 62 FGAEAEAIVF 71 A+ ++ Sbjct: 315 MTLTADVLLL 324 >gi|254695255|ref|ZP_05157083.1| polyamine ABC transporter, ATP-binding protein [Brucella abortus bv. 3 str. Tulya] gi|256014904|ref|YP_003104913.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella microti CCM 4915] gi|261215619|ref|ZP_05929900.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 3 str. Tulya] gi|255997564|gb|ACU49251.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella microti CCM 4915] gi|260917226|gb|EEX84087.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 3 str. Tulya] Length = 353 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|238507367|ref|XP_002384885.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357] gi|220689598|gb|EED45949.1| ABC multidrug transporter, putative [Aspergillus flavus NRRL3357] Length = 1314 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 16/27 (59%), Positives = 20/27 (74%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 + SG F++F G G GKTT ISLL+RF Sbjct: 1075 IKSGQFVAFVGPSGCGKTTVISLLERF 1101 >gi|209965468|ref|YP_002298383.1| Bifunctional enzyme cysN [Rhodospirillum centenum SW] gi|209958934|gb|ACI99570.1| Bifunctional enzyme cysN [Rhodospirillum centenum SW] Length = 655 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 48/162 (29%), Gaps = 41/162 (25%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L LL G + Sbjct: 477 FTGLSGAGKSTIANLVEKKLHADGRHTF-----------------LLDGDNLRHGLTRDL 519 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 AA R + V V + G I+L S + L Sbjct: 520 GFGAADRTENIRRVAEVAKLMADAGLIVLV-----SLISPFRADRRMARDLLPP------ 568 Query: 126 QEVMPDCTIILDLPVDI-------GLKRVQNRYSLRESACLD 160 + +D P+++ GL R R + + +D Sbjct: 569 GGF---LEVFVDTPLEVAEGRDVKGLYRRARRGEIAQFTGID 607 >gi|241203685|ref|YP_002974781.1| hypothetical protein Rleg_0946 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857575|gb|ACS55242.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 169 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 15/31 (48%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 + I F G+ G+GKTT L L + V Sbjct: 1 MLIIFGGLPGSGKTTIARALAERLNAVHVRV 31 >gi|119953420|ref|YP_945629.1| spermidine/putrescine transport ATP-binding protein PotA [Borrelia turicatae 91E135] gi|119862191|gb|AAX17959.1| spermidine/putrescine transport ATP-binding protein PotA [Borrelia turicatae 91E135] Length = 347 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 18/32 (56%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 FI+ G G GKTT I ++ FL + ++H Sbjct: 35 FITLLGPSGCGKTTLIKIIGGFLNQNKGEIHF 66 >gi|150021190|ref|YP_001306544.1| ABC transporter related [Thermosipho melanesiensis BI429] gi|149793711|gb|ABR31159.1| ABC transporter related [Thermosipho melanesiensis BI429] Length = 254 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 20/35 (57%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G FI G G+GK+T + L+ + L+ K+ + + Sbjct: 28 KGKFIGIIGPNGSGKSTTLKLVTKLLKPKSGKILL 62 >gi|94263527|ref|ZP_01287338.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium MLMS-1] gi|94266474|ref|ZP_01290166.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium MLMS-1] gi|93452919|gb|EAT03427.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium MLMS-1] gi|93456060|gb|EAT06207.1| Cobyrinic acid a,c-diamide synthase [delta proteobacterium MLMS-1] Length = 253 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 13/31 (41%), Positives = 18/31 (58%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 I+ G G GKTT ++LL R L+ +V V Sbjct: 3 IAISGKGGVGKTTIMALLARRLKEMGREVLV 33 >gi|88799797|ref|ZP_01115371.1| Adenylylsulfate kinase and related kinase [Reinekea sp. MED297] gi|88777531|gb|EAR08732.1| Adenylylsulfate kinase and related kinase [Reinekea sp. MED297] Length = 200 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+++ L Y LL G + Sbjct: 30 FTGLSGAGKSTLANLVEQNLFAHGYH-----------------SFLLDGDNVRHGLNKDL 72 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + G I+L A+ + + L D + Sbjct: 73 GFSDADRVENIRRIGEVAKLMTDSGLIVLS--------AFISPFERDRALVRDL---FAD 121 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E + +D P+D+ +R Sbjct: 122 HEF---LEVYVDAPLDVCERR 139 >gi|259047488|ref|ZP_05737889.1| ABC superfamily ATP binding cassette transporter ABC protein [Granulicatella adiacens ATCC 49175] gi|259035679|gb|EEW36934.1| ABC superfamily ATP binding cassette transporter ABC protein [Granulicatella adiacens ATCC 49175] Length = 294 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 12 IEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE---AEA 68 G GK+T I +L L+ V + + +H++ E E E Sbjct: 35 PNGVGKSTLIQILSGHLRNNGISVSYQGKNYTSDTLFMRQHIVKMPDQSELYDELNGIEH 94 Query: 69 IVFAAARLD----HVENVIRPALMEGKI 92 + F A+ V+ VI MEG I Sbjct: 95 LNFYASMWKVASGTVQTVIEQLKMEGYI 122 >gi|255629329|gb|ACU15009.1| unknown [Glycine max] Length = 207 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 32/145 (22%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G I G+ G+GK+T L + L K + R + Sbjct: 30 GCVIWLTGLSGSGKSTIACALSQSLHSKGK-------LSYILDGDNIR----HGLNQDLS 78 Query: 64 AEAEAIVFAAARLDHVENVIRPA-LMEGKILLCDRFLDSSYA-YQGERDSSQHLFLDSLQ 121 AE R +++ + A L ++C + S + YQ +RD+ + L Sbjct: 79 FRAE------DRSENIRRIGEVAKLFADAGVIC---ITSLISPYQKDRDACRAL------ 123 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 +S + + +D+P+ + R Sbjct: 124 -LSKGDF---IEVFIDVPLHVCEAR 144 >gi|239608289|gb|EEQ85276.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis ER-3] Length = 963 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 11/61 (18%) Query: 10 EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 EG G+GK+T ISLL + L +++ + P G+ + S G GA+ E Sbjct: 319 EGPAGSGKSTTISLLSKAL---GFEIVEWKNPLGSEYS--------SQGYVSMGAQFEDF 367 Query: 70 V 70 + Sbjct: 368 L 368 >gi|188578476|ref|YP_001915405.1| adenylate kinase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188522928|gb|ACD60873.1| adenylate kinase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 182 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 68/205 (33%), Gaps = 33/205 (16%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + LK T E + R + + A+ Sbjct: 2 GPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE---- 46 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 AR D V + I ++E ++ D + + G + ++L + + P Sbjct: 47 -VMARGDLVSDDILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALCALLSKIGQP 101 Query: 131 -DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------N 183 D + LD+ ++ ++R+ R E D E KR Q++ D Sbjct: 102 LDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIGFYE 155 Query: 184 QPDRCHIVDSAHSFQSVATNILNIV 208 Q + VD S V I + Sbjct: 156 QRGKLTRVDGVGSLDEVLERIRKAL 180 >gi|150402706|ref|YP_001330000.1| nucleotide kinase [Methanococcus maripaludis C7] gi|166218740|sp|A6VHC3|KAD6_METM7 RecName: Full=Putative adenylate kinase; AltName: Full=ATP-AMP transphosphorylase gi|150033736|gb|ABR65849.1| nucleotide kinase [Methanococcus maripaludis C7] Length = 181 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 + I+ G G GK+T +LL L+ D+ Sbjct: 1 MIIAITGTPGVGKSTVSNLLFEKLKSGGKDI 31 >gi|150004203|ref|YP_001298947.1| guanylate kinase [Bacteroides vulgatus ATCC 8482] gi|254884779|ref|ZP_05257489.1| guanylate kinase [Bacteroides sp. 4_3_47FAA] gi|294775234|ref|ZP_06740758.1| guanylate kinase [Bacteroides vulgatus PC510] gi|319644158|ref|ZP_07998683.1| guanylate kinase [Bacteroides sp. 3_1_40A] gi|149932627|gb|ABR39325.1| guanylate kinase [Bacteroides vulgatus ATCC 8482] gi|254837572|gb|EET17881.1| guanylate kinase [Bacteroides sp. 4_3_47FAA] gi|294450939|gb|EFG19415.1| guanylate kinase [Bacteroides vulgatus PC510] gi|317384280|gb|EFV65251.1| guanylate kinase [Bacteroides sp. 3_1_40A] Length = 189 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 9/103 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCG-- 58 M +G I F G+GK+T I+ L ++ + T P + LS Sbjct: 1 MATGKLIIFSAPSGSGKSTIINYLLTQNLNLSFSISATSRPPRGKERHGVEYFFLSPEEF 60 Query: 59 -----VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +EF E + ++ + L G+ ++ D Sbjct: 61 RQRIANNEFLEYEEV--YENRFYGTLKAQVEKQLEAGQNVIFD 101 >gi|92109430|ref|YP_571718.1| cobyrinic acid a,c-diamide synthase [Nitrobacter hamburgensis X14] gi|91802512|gb|ABE64886.1| Cobyrinic acid a,c-diamide synthase [Nitrobacter hamburgensis X14] Length = 407 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 32/85 (37%), Gaps = 10/85 (11%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GKTT + L + L + Y V + L EF E ++ A Sbjct: 134 GSGKTTTAAHLAQHLTLQGYRVLAVDLDPQASLSA------LHGYQPEFDIEENGTLYGA 187 Query: 74 ARLD----HVENVIRPALMEGKILL 94 R D + ++IRP G ++ Sbjct: 188 IRYDDARRDLCDIIRPTYFSGLDII 212 >gi|74314747|ref|YP_313166.1| D-gluconate kinase [Shigella sonnei Ss046] gi|331656102|ref|ZP_08357090.1| shikimate kinase [Escherichia coli M718] gi|73858224|gb|AAZ90931.1| gluconate kinase [Shigella sonnei Ss046] gi|323166634|gb|EFZ52393.1| thermosensitive gluconokinase [Shigella sonnei 53G] gi|331046456|gb|EGI18546.1| shikimate kinase [Escherichia coli M718] Length = 187 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + LD + L R+Q R L FE L+ + + Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149 Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216 D H +V V + Q R+ Sbjct: 150 DINHDIANVTEQCRQAVLAIRQDRI 174 >gi|94986383|ref|YP_605747.1| guanylate kinase [Deinococcus geothermalis DSM 11300] gi|119371213|sp|Q1IW06|KGUA_DEIGD RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|94556664|gb|ABF46578.1| Guanylate kinase [Deinococcus geothermalis DSM 11300] Length = 242 Score = 38.5 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 56/220 (25%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 + GL I G G GK T R+L DV + A R GVD Sbjct: 20 HRGLLIVMTGASGVGKGTLRE---RWL--AGQDVFYSTSWTTREARPGERD-----GVDY 69 Query: 62 FGAEAEAIV-------------FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 E + F I AL G+ ++ + ++ A Q + Sbjct: 70 VFVTPEVFLEKVRQNGFLEHAQFVGNHYGTPTEPIEAALARGQDVVLE--IEVEGAMQVK 127 Query: 109 RDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVM 168 + I +P L ++ R + R + + E++ Sbjct: 128 ERMGEEAV---------------LVFI--MPP--SLTELRRRLTGRATETPERIEKR--- 165 Query: 169 IHEKRRQIFLDIARNQPDRCHIVD-----SAHSFQSVATN 203 ++ R +I R IV+ + Q+V Sbjct: 166 -LQRARD---EIMAAHAFRYVIVNDDLDRAVRELQAVQRA 201 >gi|306841084|ref|ZP_07473806.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO2] gi|306288894|gb|EFM60199.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO2] Length = 353 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDSGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|298712080|emb|CBJ26660.1| similar to 3-phosphoadenosine 5-phosphosulfate synthase 2 isoform 2 [Ectocarpus siliculosus] Length = 1109 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 39/136 (28%), Gaps = 25/136 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T L+ L + L G + Sbjct: 220 GLSGSGKSTIAKALEEELVLRGGKHVYR----------------LDGDNIRTGLNRDLGF 263 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 A R + V V + L D + + ++ ++ + Sbjct: 264 SEADRGESVRRVGETSC-----LFSDSGTITIVSLVSPYRDARDAVRKRHEDQGIPFFE- 317 Query: 131 DCTIILDLPVDIGLKR 146 + LD+P++ +R Sbjct: 318 ---VFLDVPLEEVQRR 330 >gi|293412363|ref|ZP_06655086.1| predicted protein [Escherichia coli B354] gi|291469134|gb|EFF11625.1| predicted protein [Escherichia coli B354] Length = 254 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 17/111 (15%), Positives = 34/111 (30%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK--------NYDVHVTREP------GGTPAAEAARH 52 I+ G +G+GK+T + L L + E G P R Sbjct: 34 IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 93 Query: 53 VLLSCGVDEFGA---EAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 +++ + R ++ + +G +L+ DR+ Sbjct: 94 KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 143 >gi|282890550|ref|ZP_06299073.1| hypothetical protein pah_c022o141 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499547|gb|EFB41843.1| hypothetical protein pah_c022o141 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 628 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 26/54 (48%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 + G F++ G GAGK+T + LL R + ++ + +P + R ++ Sbjct: 401 IRKGEFVAIVGPTGAGKSTIVQLLPRLYDPQKGEIRIDGQPLNAYTQRSLREMI 454 >gi|256059644|ref|ZP_05449841.1| polyamine ABC transporter, ATP-binding protein [Brucella neotomae 5K33] gi|261323615|ref|ZP_05962812.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella neotomae 5K33] gi|261299595|gb|EEY03092.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella neotomae 5K33] Length = 353 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|254720644|ref|ZP_05182455.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. 83/13] gi|265985689|ref|ZP_06098424.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella sp. 83/13] gi|306837370|ref|ZP_07470249.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. NF 2653] gi|306846316|ref|ZP_07478877.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO1] gi|264664281|gb|EEZ34542.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella sp. 83/13] gi|306273311|gb|EFM55180.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. BO1] gi|306407562|gb|EFM63762.1| polyamine ABC transporter, ATP-binding protein [Brucella sp. NF 2653] Length = 353 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|261203353|ref|XP_002628890.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis SLH14081] gi|239586675|gb|EEQ69318.1| cell cycle checkpoint protein rad17 [Ajellomyces dermatitidis SLH14081] Length = 959 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 11/61 (18%) Query: 10 EGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 EG G+GK+T ISLL + L +++ + P G+ + S G GA+ E Sbjct: 315 EGPAGSGKSTTISLLSKAL---GFEIVEWKNPLGSEYS--------SQGYVSMGAQFEDF 363 Query: 70 V 70 + Sbjct: 364 L 364 >gi|228934203|ref|ZP_04097042.1| hypothetical protein bthur0009_26620 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228825371|gb|EEM71165.1| hypothetical protein bthur0009_26620 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 282 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINEILSQNKIEVELFLE 39 >gi|209966972|ref|YP_002299887.1| maltose [Rhodospirillum centenum SW] gi|209960438|gb|ACJ01075.1| maltose [Rhodospirillum centenum SW] Length = 387 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 8/79 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRK-------NYDVHVTREPGGTPAAEAARHVLL 55 SG FI F G G GK+T + L+ L+ +V R P A + L Sbjct: 28 SGEFIVFVGPSGCGKSTLLRLVAG-LEEPTGGEVMIGGEVVNDRPPSDRGIAMVFQSYAL 86 Query: 56 SCGVDEFGAEAEAIVFAAA 74 + + A + A A Sbjct: 87 YPHMTAYENLAFGLKLARA 105 >gi|220909793|ref|YP_002485104.1| uridine kinase [Cyanothece sp. PCC 7425] gi|219866404|gb|ACL46743.1| uridine kinase [Cyanothece sp. PCC 7425] Length = 209 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 26/159 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L ++ GI+G+GK L L ++ DVH L+ F Sbjct: 24 LLVAISGIDGSGKGYITEKLVAQLNQQ--DVHAIALNIDPW---------LTPPEQRFNP 72 Query: 65 E--AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE A + + + L + + +L+++ Q +Q + Sbjct: 73 HHPAEHFYHHAFAFEQIFQQLIDPLRTNRSI----YLETTLTGQFGIPFTQIYDFQDVDI 128 Query: 123 ISVQEVMP---------DCTIILDLPVDIGLKRVQNRYS 152 I ++ + D ++ + L R R Sbjct: 129 IVLEGIFLLKRSLRQNYDLAFWIECSFETALARALQRNQ 167 >gi|152998323|ref|YP_001343158.1| signal recognition particle-docking protein FtsY [Marinomonas sp. MWYL1] gi|150839247|gb|ABR73223.1| signal recognition particle-docking protein FtsY [Marinomonas sp. MWYL1] Length = 413 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 217 GVNGVGKTTTIGKLAKKYQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNNVPVVAQH-- 272 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A +G I++ D Sbjct: 273 TGADSASVIYDAIESAKAKGVDIVIAD 299 >gi|167645713|ref|YP_001683376.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Caulobacter sp. K31] gi|167348143|gb|ABZ70878.1| sulfate adenylyltransferase, large subunit [Caulobacter sp. K31] Length = 642 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 34/148 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G + G+ GAGK+T +L+++ L + LL Sbjct: 466 QRGRVVWLTGLSGAGKSTIANLVEKRLHALGRHTY-----------------LLDGDNVR 508 Query: 62 FGAEAEAIVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G R++ V V + + G I+L A+ + + L + Sbjct: 509 HGLNKNLGFTEEDRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRAERRLARE 560 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 L++ E + +D P+ + +R Sbjct: 561 ILRDGEFVE------VFVDTPLAVAEQR 582 >gi|17989468|ref|NP_542101.1| iron(III)-transport ATP-binding protein sfuC [Brucella melitensis bv. 1 str. 16M] gi|225685974|ref|YP_002733946.1| polyamine ABC transporter ATP-binding protein [Brucella melitensis ATCC 23457] gi|256043034|ref|ZP_05445979.1| polyamine ABC transporter, ATP-binding protein [Brucella melitensis bv. 1 str. Rev.1] gi|256111979|ref|ZP_05452930.1| polyamine ABC transporter, ATP-binding protein [Brucella melitensis bv. 3 str. Ether] gi|256262902|ref|ZP_05465434.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|260564267|ref|ZP_05834752.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|265989473|ref|ZP_06102030.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella melitensis bv. 1 str. Rev.1] gi|265993428|ref|ZP_06105985.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella melitensis bv. 3 str. Ether] gi|17985348|gb|AAL54365.1| iron(iii)-transport ATP-binding protein sfuc [Brucella melitensis bv. 1 str. 16M] gi|225642079|gb|ACO01992.1| polyamine ABC transporter, ATP-binding protein [Brucella melitensis ATCC 23457] gi|260151910|gb|EEW87003.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 1 str. 16M] gi|262764298|gb|EEZ10330.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella melitensis bv. 3 str. Ether] gi|263000142|gb|EEZ12832.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella melitensis bv. 1 str. Rev.1] gi|263092739|gb|EEZ16948.1| spermidine/putrescine ABC transporter [Brucella melitensis bv. 2 str. 63/9] gi|326410297|gb|ADZ67361.1| polyamine ABC transporter ATP-binding protein [Brucella melitensis M28] gi|326553591|gb|ADZ88230.1| polyamine ABC transporter ATP-binding protein [Brucella melitensis M5-90] Length = 353 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|49478170|ref|YP_037428.1| cobalt ABC transporter ATP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|56748688|sp|Q6HG98|Y3105_BACHK RecName: Full=Putative ABC transporter ATP-binding protein BT9727_3105 gi|49329726|gb|AAT60372.1| cobalt ABC transporter, ATP-binding protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 551 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 10/88 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI G G+GKTT + K+ L T G LL D Sbjct: 29 IQKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPD 78 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM 88 A+ +VF V + + L Sbjct: 79 LLSAQEIGMVFQNPENQLVMDTVIQELA 106 >gi|317012002|gb|ADU82610.1| shikimate kinase [Helicobacter pylori Lithuania75] Length = 162 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ L L+ +V T + R + G D F +F Sbjct: 11 GSGKSSLAQELGLALR---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 +D ++ + P ++ + ++L+ + T Sbjct: 62 NLIDELKTLKTP------HVIST--------------GGGIVMHENLKGLGT-------T 94 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 L + + +KR+ + + D + K++ EKR+ ++ A I+D+ Sbjct: 95 FYLKIDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146 Query: 194 AHSFQSVATNILNIV 208 + +L + Sbjct: 147 RGGLNNSLKQVLQFI 161 >gi|311280749|ref|YP_003942980.1| ABC transporter related protein [Enterobacter cloacae SCF1] gi|308749944|gb|ADO49696.1| ABC transporter related protein [Enterobacter cloacae SCF1] Length = 272 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 ++ G G+GK+T I L+ + ++ + +P R + Sbjct: 52 VTILGPSGSGKSTLIRLINQLETLSGGEILIDNQPTRALQGRKLRQL 98 >gi|307564668|ref|ZP_07627198.1| guanylate kinase [Prevotella amnii CRIS 21A-A] gi|307346596|gb|EFN91903.1| guanylate kinase [Prevotella amnii CRIS 21A-A] Length = 190 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 17/106 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV-------TREPGGTPA-AEAARHVL 54 G I F G+GK+T + ++L +++ ++H+ TR+P G + Sbjct: 2 QGKLIIFSAPSGSGKST----IVQWLMQEHPELHLAFSISCTTRQPRGKERNGVEYIFLS 57 Query: 55 LSCGVDEFGAEAEAIVF---AAARLD-HVENVIRPALMEGKILLCD 96 L ++ E + + R ++ I L G+ ++ D Sbjct: 58 LDDFKNKIDNN-EFLEYEEVYKDRFYGTLKKQIESQLKAGQNVIFD 102 >gi|303235147|ref|ZP_07321767.1| polyphosphate:nucleotide phosphotransferase, PPK2 family [Finegoldia magna BVS033A4] gi|302493739|gb|EFL53525.1| polyphosphate:nucleotide phosphotransferase, PPK2 family [Finegoldia magna BVS033A4] Length = 286 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 31/202 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ + + ++ AGK + + + L V ++P E H L Sbjct: 56 KKGILVVLQAMDAAGKDSLVKKVFTALNPAGCKVTSFKQPST----EELDHDYLWRITKA 111 Query: 62 FGAEAEAIVFAAARLD-----HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A E +F + + V N++ + RF D + A++ D++ Sbjct: 112 TPAYGEVGIFNRSHYEDVLVTRVHNLVNKKNDDDFW--EKRFEDIN-AFEKYLDNNGIKV 168 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHEK 172 + L + D +R+ +R +L E A D ER++ + + Sbjct: 169 VK---------------FFLHVSKDEQKERLLDRINLEEKHWKFAASDILERENWDDYHR 213 Query: 173 RRQIFLDIARNQPDRCHIVDSA 194 + L+ ++V + Sbjct: 214 AYEDMLEHTSTDYAPWYVVPAD 235 >gi|238485103|ref|XP_002373790.1| guanylate kinase [Aspergillus flavus NRRL3357] gi|317141020|ref|XP_003189320.1| guanylate kinase [Aspergillus oryzae RIB40] gi|220701840|gb|EED58178.1| guanylate kinase [Aspergillus flavus NRRL3357] Length = 230 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 27/163 (16%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + G GAGK+T + L + + V H TR P P + R + D Sbjct: 42 VVVSGPSGAGKSTLLKRLFADYPDTFGFSVSHTTRAP--RPGEQHGREYYFTTKADFLDL 99 Query: 65 EA-----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E F ++ +G+I + D E + + + Sbjct: 100 VSKNGFIEHAQFGGNHYGTSVQAVKDIAKKGRICILD----------IEMEGVKQVKRTD 149 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L + P V+ +R++ R + E + Sbjct: 150 LNARFMFLAPP--------SVEELERRLRGRGTESEESLSKRL 184 >gi|218710617|ref|YP_002418238.1| cobyrinic acid A,C-diamide synthase [Vibrio splendidus LGP32] gi|218323636|emb|CAV19919.1| Cobyrinic acid A,C-diamide synthase [Vibrio splendidus LGP32] Length = 434 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 7/81 (8%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GKTT ++ L R L ++ V V + G + LS D + + + Sbjct: 17 GSGKTTVVAALARALVQQGKKVRVFK--TGPDFIDPQ---FLSIASDTPTYQLDLWMCGE 71 Query: 74 ARLDHVENVIRPALMEGKILL 94 A H+ + + AL IL+ Sbjct: 72 AECQHL--IYQAALEADVILI 90 >gi|239616584|ref|YP_002939906.1| dephospho-CoA kinase [Kosmotoga olearia TBF 19.5.1] gi|239505415|gb|ACR78902.1| dephospho-CoA kinase [Kosmotoga olearia TBF 19.5.1] Length = 193 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 75/208 (36%), Gaps = 43/208 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-------LLSCGVDEFGAE- 65 G GK+ LL L V G E + +L + + Sbjct: 11 GCGKS----LLVSLLSGPETKVIDLDRLGHEVLKELKSQLVLTYGSGILDNSRKKIDRKK 66 Query: 66 -AEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLD--SLQ 121 E + + +L + +++ P + E K ++ + +++ +D + Sbjct: 67 LGEIVFKDSRKLKLLNSIVHPLIKEKVKKIIS-------------KTRKKYVLIDGALIH 113 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 +I + ++ D I +D P ++ +KR+ +R RE + + + + K + DIA Sbjct: 114 QIGLGKLC-DLIIWVDCPDEVAIKRLASRGIPRE-RAISILNSQKELENYKV---YSDIA 168 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVW 209 +D+ S Q + + I+ Sbjct: 169 ---------IDNTGSPQELLIKVREILR 187 >gi|67459498|ref|YP_247122.1| Signal recognition particle protein [Rickettsia felis URRWXCal2] gi|67005031|gb|AAY61957.1| Signal recognition particle protein [Rickettsia felis URRWXCal2] Length = 487 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT S L L+ +N V + PAA+ +L Sbjct: 147 GLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 190 >gi|87311737|ref|ZP_01093852.1| Shikimate kinase II [Blastopirellula marina DSM 3645] gi|87285521|gb|EAQ77440.1| Shikimate kinase II [Blastopirellula marina DSM 3645] Length = 177 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 60/213 (28%), Gaps = 61/213 (28%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GK+ LL L G P +A + A +FAA Sbjct: 10 GVGKSHVARLLGERL--------------GWPVIDADVEL------QRRAQRTIAQIFAA 49 Query: 74 A----RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 D VI + + + ++ L + ++Q Sbjct: 50 DGEPAFRDLETAVIADLMQQDQQVVA---------------LGGGAVLRAENRAAIQANS 94 Query: 130 PDCTIILDLPVDIGLKRVQN-------RYSLRESACLDYFERKDVMIHEKRRQI-FLDIA 181 T L D + R+ R L E + E+ + R+ + + A Sbjct: 95 --YTFWLTADADTIMARISADAATATQRPRLTEMTPREEIEQ-----LLQVRESLYRETA 147 Query: 182 RNQPDRCHIVDSAH-SFQSVATNILNIVWELVQ 213 IVD+ + + VA I L++ Sbjct: 148 D------VIVDAQQQTPEEVAREIYQFFAPLIE 174 >gi|86146403|ref|ZP_01064727.1| cobyrinic acid a,c-diamide synthase [Vibrio sp. MED222] gi|85835882|gb|EAQ54016.1| cobyrinic acid a,c-diamide synthase [Vibrio sp. MED222] Length = 434 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 7/81 (8%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GKTT ++ L R L ++ V V + G + LS D + + + Sbjct: 17 GSGKTTVVAALARALVQQGKKVRVFK--TGPDFIDPQ---FLSIASDTPTYQLDLWMCGE 71 Query: 74 ARLDHVENVIRPALMEGKILL 94 A H+ + + AL IL+ Sbjct: 72 AECQHL--IYQAALEADVILI 90 >gi|108804310|ref|YP_644247.1| guanylate kinase [Rubrobacter xylanophilus DSM 9941] gi|119371282|sp|Q1AVZ3|KGUA_RUBXD RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|108765553|gb|ABG04435.1| guanylate kinase [Rubrobacter xylanophilus DSM 9941] Length = 191 Score = 38.5 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 16/38 (42%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M G I G GAGK+T I + + Y V T Sbjct: 1 MRRGRLIVVSGPSGAGKSTLIRAALDAVPQLAYSVSAT 38 >gi|330507923|ref|YP_004384351.1| adenylate kinase [Methanosaeta concilii GP-6] gi|328928731|gb|AEB68533.1| adenylate kinase [Methanosaeta concilii GP-6] Length = 215 Score = 38.5 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 25/153 (16%), Positives = 51/153 (33%), Gaps = 35/153 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK T ++ Y V + R + S G EA Sbjct: 3 IILLGPPGSGKGTQAKMIADK-----YKV------THVSTGDILRENVRSG--TPLGVEA 49 Query: 67 EAIVFAAARL--DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A + + ++I+ L + + + G + + Sbjct: 50 KKFMDAGKLVPDALLIDIIKDRLAKDDV-------KGGWMLDGFPRTMPQAE-------A 95 Query: 125 VQEVMP------DCTIILDLPVDIGLKRVQNRY 151 + +++P D + +D+P + +KRV R Sbjct: 96 LDKILPTLGQKIDVVLNIDVPDEELVKRVTGRR 128 >gi|215778370|ref|YP_002261510.1| conjugative transfer protein TraD [Aliivibrio salmonicida LFI1238] gi|208011415|emb|CAQ81879.1| conjugative transfer protein TraD [Aliivibrio salmonicida LFI1238] Length = 692 Score = 38.5 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 7/111 (6%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR---HVLLSCGVDEF-GA 64 +G GAGK+ + L R+++++ + + G T + +L+ + Sbjct: 192 IDGTTGAGKSVALRKLVRWIRKRGDKAII-YDKGCTFVGKFYNPETDTILNPFDERCANW 250 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQ 113 + A +++ + P +G + R + SS A+Q +D+ Sbjct: 251 DIWCDAKEAPDFENMAAALIPQHGDGDPFWVDSARTIFSSTAFQMMKDNEP 301 >gi|148558001|ref|YP_001257178.1| spermidine/putrescine ABC transporter ATP-binding protein [Brucella ovis ATCC 25840] gi|148369286|gb|ABQ62158.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella ovis ATCC 25840] Length = 353 Score = 38.5 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDNGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|41408180|ref|NP_961016.1| hypothetical protein MAP2082 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396535|gb|AAS04399.1| hypothetical protein MAP_2082 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 479 Score = 38.5 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 60/205 (29%), Gaps = 38/205 (18%) Query: 11 GIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G+ +GKTT L L + DV R G P + Sbjct: 301 GLPASGKTTLARALAGRLGLVHLSSDVARKRMAGIPPTRRGSDEFGSGLYDPAMTRNT-- 358 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 +AA R D L G+ ++ D L++++ + Sbjct: 359 --YAALRRDAAR-----WLRRGRGVVVD------------ATFGNPGERAQLRQLAHRLG 399 Query: 129 MPDC-TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD- 186 + D ++ D D + R++ R + + E + + R F PD Sbjct: 400 V-DLHVVLCDADDDTLIARLKRRATEQGVVSDARIE-----LWPQLRAAF-----TPPDE 448 Query: 187 --RCHIVDSAHSFQSVATNILNIVW 209 VD+ + L ++ Sbjct: 449 QASVLRVDATRDTEETVEQALGLLR 473 >gi|11497904|ref|NP_069126.1| adenylylsulfate kinase [Archaeoglobus fulgidus DSM 4304] gi|7387595|sp|O29953|CYSC_ARCFU RecName: Full=Probable adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|2650349|gb|AAB90945.1| adenylylsulfate 3-phosphotransferase (cysC) [Archaeoglobus fulgidus DSM 4304] Length = 155 Score = 38.5 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 I G GAGKTT + L + L+ Y V Sbjct: 5 IWITGPSGAGKTTLANALYKKLESMGYRV 33 >gi|117928441|ref|YP_872992.1| cytidylate kinase [Acidothermus cellulolyticus 11B] gi|117648904|gb|ABK53006.1| cytidylate kinase [Acidothermus cellulolyticus 11B] Length = 255 Score = 38.5 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 13/84 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ +G GAGK+T + R L + D R V L + Sbjct: 10 MVIAIDGPAGAGKSTVARAVARRLGLRYLD-----------TGAMYRAVTLWVLRNGVSL 58 Query: 65 EAEAIVFAAARLDHVENVIRPALM 88 E V AAAR HV +++ AL Sbjct: 59 TDERAVSAAAR--HVVDILDLALA 80 >gi|291563523|emb|CBL42339.1| guanylate kinase [butyrate-producing bacterium SS3/4] Length = 208 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 66/216 (30%), Gaps = 46/216 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G+ + G GAGK T + L V TR P L + Sbjct: 3 TKGVLVVVSGFSGAGKGTVMKALLEKYDNYALSVSATTRSPRPGEENGREYFFLTESQFE 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + E I +H V D + + Y ++ + + + Sbjct: 63 DMIRNDELI-------EHARYV-------------DHYYGTPRKYVEDKMAVGKDVILEI 102 Query: 121 Q---EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 + +++++ PD ++ +P K ++ R R + + E++ Sbjct: 103 EIQGALNIKKKFPDTLLVFIVPP--TAKDLKKRLIGRGTESAEVIEKR------------ 148 Query: 178 LDIARNQPDRCHIVDSAHSFQ--SVATNILNIVWEL 211 L A + D S+ V ++ V +L Sbjct: 149 LRRAAEES------DGMDSYDYIVVNDDVDTCVEDL 178 >gi|315500981|ref|YP_004079868.1| metallophosphoesterase [Micromonospora sp. L5] gi|315407600|gb|ADU05717.1| metallophosphoesterase [Micromonospora sp. L5] Length = 838 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 46/202 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ G+ G+GK+T H P +++ R ++ D+ A Sbjct: 11 LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDTFRGLVADDENDQ-SAS 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A+A L HV + L G + + D +A G ++ Sbjct: 56 ADAF----DALHHVAAI---RLRRGLLTVVDATNLQPHARAGLIRVARE----------- 97 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIARNQ 184 +V+P I+LD+P + +R + R L+ R+D+ RQ + +AR Sbjct: 98 HDVLP-VAIVLDVPEAVAWERTEARADRTHGRQVLNRM-RRDL------RQSYGRLAREG 149 Query: 185 PDRCHIVDSAHSFQSV-ATNIL 205 + H++ + A I Sbjct: 150 FRKVHVL---RGVDEIDAAEIR 168 >gi|268324658|emb|CBH38246.1| hypothetical protein BSM_17230 [uncultured archaeon] Length = 418 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 59/181 (32%), Gaps = 42/181 (23%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+ I+ G GAGK+T +L ++ + TR+P R LS Sbjct: 4 TGIIIT--GTSGAGKSTIAGILCEKIRDLQVAQAVTTRKP---------REDDLSNMYQY 52 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ--HLFLDS 119 G E +LD ++ A+ G+ + YQ + + Sbjct: 53 MGKEE------FDKLDKDRELLIKAIYRGE------YY--GITYQALNIVLDNSRVPILV 98 Query: 120 LQEISVQEVMPD---------CTIILDLPVDIGLKRVQNRYS-----LRESACLDYFERK 165 L S + + D I LD P D+ R+ R + + D K Sbjct: 99 LTPESTKSLEEDTKERGEFKYFIIFLDAPDDVLNSRLVERGEQNNENVEKQRREDRIYAK 158 Query: 166 D 166 D Sbjct: 159 D 159 >gi|239946690|ref|ZP_04698443.1| signal recognition particle protein [Rickettsia endosymbiont of Ixodes scapularis] gi|239920966|gb|EER20990.1| signal recognition particle protein [Rickettsia endosymbiont of Ixodes scapularis] Length = 449 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT S L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 152 >gi|257423008|ref|ZP_05599998.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294780946|ref|ZP_06746298.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|300859910|ref|ZP_07105998.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|257164832|gb|EEU94792.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|294451892|gb|EFG20342.1| conserved hypothetical protein [Enterococcus faecalis PC1.1] gi|295112677|emb|CBL31314.1| Zeta toxin. [Enterococcus sp. 7L76] gi|300850728|gb|EFK78477.1| conserved hypothetical protein [Enterococcus faecalis TUSoD Ef11] gi|323480314|gb|ADX79753.1| conserved hypothetical protein [Enterococcus faecalis 62] Length = 164 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 32/156 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 I G G+GKTT + L + L+ + + + R +L DE G Sbjct: 4 KLIILRGNSGSGKTTIANALHQCLKEQ----------SLLISQDVVRREMLRVK-DETGN 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + A++ + ++ E + ++ + +Q S + L E + Sbjct: 53 LSIALL---------KQLVAFGYQECQYVIVEG------IFQKAIYHSFFQEIIHLFEGN 97 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 VQ D+ + LKR R +E ++ Sbjct: 98 VQ------VYYFDISFEETLKRHSQRNKNQEFGVVE 127 >gi|229825426|ref|ZP_04451495.1| hypothetical protein GCWU000182_00785 [Abiotrophia defectiva ATCC 49176] gi|229789989|gb|EEP26103.1| hypothetical protein GCWU000182_00785 [Abiotrophia defectiva ATCC 49176] Length = 580 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 14/70 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA---AEAARHVLLSC 57 + SG I+ G G+GK+T ++LL+R+ EPG + R L Sbjct: 362 IKSGKIIALSGESGSGKSTIVNLLQRY-----------AEPGEGQILVNGKDIRSFTLES 410 Query: 58 GVDEFGAEAE 67 + + Sbjct: 411 WRNAISVVTQ 420 >gi|218706612|ref|YP_002414131.1| hypothetical protein ECUMN_3469 [Escherichia coli UMN026] gi|293406602|ref|ZP_06650528.1| ATP-binding protein yghS [Escherichia coli FVEC1412] gi|298382341|ref|ZP_06991938.1| ATP-binding protein yghS [Escherichia coli FVEC1302] gi|331674540|ref|ZP_08375300.1| hypothetical ATP-binding protein YghS [Escherichia coli TA280] gi|218433709|emb|CAR14626.1| conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain [Escherichia coli UMN026] gi|291426608|gb|EFE99640.1| ATP-binding protein yghS [Escherichia coli FVEC1412] gi|298277481|gb|EFI18997.1| ATP-binding protein yghS [Escherichia coli FVEC1302] gi|331068634|gb|EGI40029.1| hypothetical ATP-binding protein YghS [Escherichia coli TA280] Length = 237 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + G +++ + R ++ + +G +L+ DR+ Sbjct: 77 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126 >gi|193735096|gb|ACF20057.1| regulatory protein [Neisseria gonorrhoeae] Length = 140 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 106 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 107 TTGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|196042997|ref|ZP_03110236.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB108] gi|196026481|gb|EDX65149.1| ABC transporter, ATP-binding protein [Bacillus cereus 03BB108] Length = 551 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 10/88 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI G G+GKTT + K+ L T G LL D Sbjct: 29 IQKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPD 78 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM 88 A+ +VF V + + L Sbjct: 79 LLSAQEIGMVFQNPENQLVMDTVIQELA 106 >gi|220922934|ref|YP_002498236.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060] gi|219947541|gb|ACL57933.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 271 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G FIS G G GK+T + +L L + + ++ GT + R + Sbjct: 48 GEFISIVGPSGCGKSTLLKILAGLLPASDGEAYL----NGTRISGPRRDI 93 >gi|326382164|ref|ZP_08203856.1| guanylate kinase [Gordonia neofelifaecis NRRL B-59395] gi|326198894|gb|EGD56076.1| guanylate kinase [Gordonia neofelifaecis NRRL B-59395] Length = 206 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 71/215 (33%), Gaps = 41/215 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G + G GK+T ++ L+ + + V TREP H + D Sbjct: 8 RRGRLVVLVGPSAVGKSTVVARLRELVPDLWFSVSATTREPRPGEVDGHDYHFVSREKFD 67 Query: 61 EFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 AE + +A R +R AL G +L L Sbjct: 68 SMIERAELLEWADIHGGLQRSGTPAAPVRAALDAGSPVL--------------------L 107 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +D + +V+E MP+ + P D+ ++R+ R + A E + Sbjct: 108 EVDLVGSRNVREAMPEAVSVFLAPPSWDVLVERLTGRGTESREAIDRRLETARTEM---- 163 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 AR++ + + + A ++N++ Sbjct: 164 ------AARDEFEHVVV---NDDVDAAAQQLVNLL 189 >gi|313213132|emb|CBY36991.1| unnamed protein product [Oikopleura dioica] Length = 606 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 17/74 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T L+ L K + +L G + Sbjct: 38 FTGLSGAGKSTIAMKLEEHLIAKGVPAY-----------------VLDGDNVRHGLNKDL 80 Query: 69 IVFAAARLDHVENV 82 A R +++ + Sbjct: 81 GFSLADREENIRRI 94 >gi|301167144|emb|CBW26723.1| cytidylate kinase [Bacteriovorax marinus SJ] Length = 230 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYD 34 M+ I+ +G G+GK+T L L D Sbjct: 1 MSLSKVIAIDGPSGSGKSTIAKKLAESLNVLYID 34 >gi|298674678|ref|YP_003726428.1| signal recognition particle-docking protein FtsY [Methanohalobium evestigatum Z-7303] gi|298287666|gb|ADI73632.1| signal recognition particle-docking protein FtsY [Methanohalobium evestigatum Z-7303] Length = 359 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 17/146 (11%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I+ + LQ NY + G T A A + ++ + Sbjct: 167 IVFVGVNGTGKTTTIAKMANLLQNDNYSTVIAA--GDTFRAGAIDQI--ESHANKINTKL 222 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 V + ++ A ++L D R + + L++ Sbjct: 223 IKHQEMGDPAAVVYDAVQYAKSRSIDVVLSD---------TAGRMHTNVNLMSQLEK-VC 272 Query: 126 QEVMPDCTIILD--LPVDIGLKRVQN 149 + PD I +D + + ++R Q Sbjct: 273 RVSSPDLIIFVDEAVAGNDAVERAQQ 298 >gi|296331964|ref|ZP_06874428.1| putative ABC transporter component, ATP-binding protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675642|ref|YP_003867314.1| putative ABC transporter ATP-binding protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296150735|gb|EFG91620.1| putative ABC transporter component, ATP-binding protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413886|gb|ADM39005.1| putative ABC transporter component, ATP-binding protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 260 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPG 42 G FISF G G GKTT +S++ ++ + + REP Sbjct: 32 KGDFISFLGPSGCGKTTLLSIIAGLIEPSEGRVLIEGREPN 72 >gi|291545208|emb|CBL18317.1| signal recognition particle subunit FFH/SRP54 (srp54) [Ruminococcus sp. 18P13] Length = 460 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 19/24 (79%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD 34 G++G+GKTTH + L ++L+R+ + Sbjct: 108 GLQGSGKTTHAAKLAKYLKREGHR 131 >gi|229173209|ref|ZP_04300758.1| uridine kinase [Bacillus cereus MM3] gi|228610293|gb|EEK67566.1| uridine kinase [Bacillus cereus MM3] Length = 187 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 3/79 (3%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN-QPDRCH 189 D TI +D P+DI + R R + +D R+ +L+ +P+ Sbjct: 100 DATIFIDTPLDIAMARRILR--DFKEGTIDEIHNDLKHYMTFARKAYLEAIHTVKPNSDI 157 Query: 190 IVDSAHSFQSVATNILNIV 208 ++D + S + + + Sbjct: 158 VLDGSLSVSEIMKRAVEEL 176 >gi|255936451|ref|XP_002559252.1| adenylylsulfate kinase AAA81521-Penicillium chrysogenum [Penicillium chrysogenum Wisconsin 54-1255] gi|211583872|emb|CAP91896.1| adenylylsulfate kinase AAA81521-Penicillium chrysogenum [Penicillium chrysogenum Wisconsin 54-1255] Length = 211 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 31/151 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G+ +GK+T L+ L ++ VH R L Sbjct: 23 QRGLTIWLTGLSASGKSTLAVELEHQLV-RDRGVHAYR---------------LDGDNIR 66 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118 FG + A R +++ + A + F DS S A Sbjct: 67 FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNSIAITSFISPYRKDRDTAR 117 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKR 146 L E++ +P + +D+PV++ +R Sbjct: 118 QLHEVATPGEETGLPFVEVYVDVPVEVAEQR 148 >gi|195344754|ref|XP_002038944.1| GM17107 [Drosophila sechellia] gi|194134074|gb|EDW55590.1| GM17107 [Drosophila sechellia] Length = 4019 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 24/117 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G G GK+T ISLLK+ L VH + R L ++ Sbjct: 1907 VVLVGPPGCGKSTIISLLKQALCGNQLKVHTISPKSMSRIQLLGR---LDADTRQWQDG- 1962 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + A V P+ ++CD S ++++L + Sbjct: 1963 -VLTHTA-----VAVNQEPS-QVHSWIVCD-------------GSIDPEWIEALNSV 1999 >gi|189205443|ref|XP_001939056.1| adenylate kinase isoenzyme 1 [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187975149|gb|EDU41775.1| adenylate kinase isoenzyme 1 [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 308 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 57/218 (26%), Gaps = 56/218 (25%) Query: 11 GIEGAGKTTHISLLK-----RFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDEF 62 G GAGK T L + L + + RE G+ E + + + Sbjct: 121 GGPGAGKGTQCQKLVSDYGFKHLSAGD----LLREEQDRQGSEFGEMIKTYIKEGTIVPM 176 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + +EN +R ++ G + L D F LD Sbjct: 177 EV----------TVQLLENAMRNSIESGNNMFLIDGF---------------PRKLDQAH 211 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 T+ D KR+ R A + E R+ F Sbjct: 212 AFERSVCPSKFTLFFDCSEASMEKRLLQRGETSGRADDNP---------ESIRKRFRTFV 262 Query: 182 R---------NQPDRCHIVDSAHSFQSVATNILNIVWE 210 R V++ S V ++ + E Sbjct: 263 ETSMPVVTEFESQGRVIKVNAETSPDEVYKHVQEKLKE 300 >gi|118478604|ref|YP_895755.1| cobalt ABC transporter ATP-binding protein [Bacillus thuringiensis str. Al Hakam] gi|118417829|gb|ABK86248.1| cobalt ABC transporter, ATP-binding protein [Bacillus thuringiensis str. Al Hakam] Length = 553 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 29/88 (32%), Gaps = 10/88 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + G FI G G+GKTT + K+ L T G LL D Sbjct: 31 IQKGEFIVLAGGSGSGKTTLLKHFKKELLPIGKRTGDTYYDGT----------LLENVPD 80 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM 88 A+ +VF V + + L Sbjct: 81 LLSAQEIGMVFQNPENQLVMDTVIQELA 108 >gi|73668594|ref|YP_304609.1| cobalamin biosynthesis protein [Methanosarcina barkeri str. Fusaro] gi|72395756|gb|AAZ70029.1| cobalamin biosynthesis protein [Methanosarcina barkeri str. Fusaro] Length = 220 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 14 GAGKTTHISLLKRFLQRKNYDV 35 G+GKTT I L L+++ V Sbjct: 8 GSGKTTLIRKLVEHLEKQGQTV 29 >gi|57239316|ref|YP_180452.1| adenylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58579282|ref|YP_197494.1| adenylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|57161395|emb|CAH58319.1| adenylate kinase [Ehrlichia ruminantium str. Welgevonden] gi|58417908|emb|CAI27112.1| Adenylate kinase [Ehrlichia ruminantium str. Welgevonden] Length = 220 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 156 SACLD-YFERKDVMIHEKRRQIFLDIARNQ---PDRCHIVDSAHSFQSVATNILNIVWEL 211 LD ++ K +I ++ Q + ++ + D+ +D+ S V +I + L Sbjct: 158 KGRLDYRYDDKIEVIVKRVNQYYEEMKDLELYYHDKIIQIDAGKSIDKVTQDIKERIEYL 217 Query: 212 V 212 + Sbjct: 218 I 218 >gi|49475773|ref|YP_033814.1| adenylate kinase [Bartonella henselae str. Houston-1] gi|68568771|sp|Q6G2Y6|KAD_BARHE RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|49238580|emb|CAF27821.1| Adenylate kinase [Bartonella henselae str. Houston-1] Length = 192 Score = 38.5 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 41/217 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GAGK T +L + H+ + G E R E G +A Sbjct: 3 IVLLGPPGAGKGTQAKMLCE-------EYHIPQLSTGDMLREVIRR------ETEIGKKA 49 Query: 67 EAIVFAAARL-DHVENVIRPALMEGKILLCDRFLDS----SYAYQGERDSSQHLFLDS-- 119 +A++ A + D + N I + DR +S + G + + Sbjct: 50 KAMINAGTLVSDSIVNQI----------VSDRIDESDCINGFVLDGYPRTVGQAEVLQQV 99 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFL 178 LQ ++Q D I L + D L+R++ R + + V ++ + + Sbjct: 100 LQSKNMQL---DAVIELIVDEDALLERMKKRVQETIIAGGQVRSDDNPVAFAKRLVE-YR 155 Query: 179 D----IARNQPDR--CHIVDSAHSFQSVATNILNIVW 209 + ++ R +VD V+ I ++ Sbjct: 156 EKTAPLSEFYLQRRLLKLVDGMIGVTEVSRKIREVLK 192 >gi|300900322|ref|ZP_07118501.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300931869|ref|ZP_07147166.1| conserved hypothetical protein [Escherichia coli MS 187-1] gi|300356212|gb|EFJ72082.1| conserved hypothetical protein [Escherichia coli MS 198-1] gi|300460292|gb|EFK23785.1| conserved hypothetical protein [Escherichia coli MS 187-1] Length = 232 Score = 38.5 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELAARMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + G +++ + R ++ + +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 121 >gi|301118468|ref|XP_002906962.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108311|gb|EEY66363.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 419 Score = 38.5 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 6/124 (4%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G AGKTT + L F + + + V+V P + + L + Sbjct: 42 VLTGGPCAGKTTSLDRLSTFFRDRGFRVYVV--PEASTLLQTGGAFFLDLQEKDILNFQW 99 Query: 68 AIVFAAARLDHVENVIRPALMEGK--ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 I+ L+ ++ A GK ++LCDR + AY + L +++ Sbjct: 100 QILSLQISLE--DSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTL 157 Query: 126 QEVM 129 ++ Sbjct: 158 RDTR 161 >gi|229156771|ref|ZP_04284858.1| Phosphoribulokinase/uridine kinase [Bacillus cereus ATCC 4342] gi|228626691|gb|EEK83431.1| Phosphoribulokinase/uridine kinase [Bacillus cereus ATCC 4342] Length = 219 Score = 38.5 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 62/191 (32%), Gaps = 17/191 (8%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I GI G AGKTT + L L + + T +P + V+ +E Sbjct: 20 IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT-DPYIVSSDIRKHAVIHYTYQNENH 77 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AA + G D + ++ Y + S + ++ + Sbjct: 78 RYKMTACHPAAHHFAALERDIQMVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVEGM 132 Query: 124 SVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 S + P D I + L R +R A ++Y + HE+RR + Sbjct: 133 SAAFINPDLFDLKIYFYTDGETELMRRTSRDIAERGADINYLRQS----HEERRIQYEVF 188 Query: 181 ARNQPDRCHIV 191 + R I+ Sbjct: 189 MHSYSQRFDII 199 >gi|225022376|ref|ZP_03711568.1| hypothetical protein CORMATOL_02415 [Corynebacterium matruchotii ATCC 33806] gi|224944889|gb|EEG26098.1| hypothetical protein CORMATOL_02415 [Corynebacterium matruchotii ATCC 33806] Length = 149 Score = 38.5 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 11/26 (42%), Positives = 13/26 (50%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQR 30 I F G+ G GKTT LL L+ Sbjct: 3 RLIVFAGLPGVGKTTQARLLADALRA 28 >gi|255567152|ref|XP_002524557.1| XPA-binding protein, putative [Ricinus communis] gi|223536110|gb|EEF37765.1| XPA-binding protein, putative [Ricinus communis] Length = 267 Score = 38.5 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 7/74 (9%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64 G G+GK+T+ S L + + +H+ E P + R ++ L ++E G Sbjct: 9 GPAGSGKSTYCSSLYQHCETVGRSIHIVNLDPAAENFDYPVSMDIRELISLDDVMEELGL 68 Query: 65 EAE-AIVFAAARLD 77 A+++ L+ Sbjct: 69 GPNGALMYCMDELE 82 >gi|58221325|gb|AAW68305.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221333|gb|AAW68309.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221339|gb|AAW68312.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221343|gb|AAW68314.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221345|gb|AAW68315.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221347|gb|AAW68316.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221349|gb|AAW68317.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221351|gb|AAW68318.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221353|gb|AAW68319.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|58221355|gb|AAW68320.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|193735104|gb|ACF20061.1| regulatory protein [Neisseria gonorrhoeae] gi|193735108|gb|ACF20063.1| regulatory protein [Neisseria gonorrhoeae] Length = 140 Score = 38.5 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 107 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 108 -TGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|48477738|ref|YP_023444.1| cytidylate kinase [Picrophilus torridus DSM 9790] gi|48430386|gb|AAT43251.1| cytidylate kinase [Picrophilus torridus DSM 9790] Length = 174 Score = 38.5 bits (89), Expect = 0.76, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 45/205 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GKTT LL L H + GG + A + + EF + Sbjct: 3 ITISGKSGSGKTTVGRLLADKL-------HYSFISGGYFFRKKAEE--FNMNLLEFNKYS 53 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 E+ D + ++ I+L R L S AY +++ Sbjct: 54 ESHPEIDYEQD--KMLLNFLKNNDNIVLESR-LSSYIAYTN----------------NIE 94 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 I L DI KR+ R + + + + +++ + Sbjct: 95 AFK----IYLYASDDIRYKRLMERDKTDILTLNERYRSEIL--------RYMEFYGIDYN 142 Query: 187 RC----HIVDSA-HSFQSVATNILN 206 I+D+ S + +I+ Sbjct: 143 NYIYYDIIIDTDKKSPDEIVNDIIE 167 >gi|320164849|gb|EFW41748.1| dephospho-CoA kinase [Capsaspora owczarzaki ATCC 30864] Length = 228 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 40/225 (17%), Positives = 70/225 (31%), Gaps = 47/225 (20%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAA----RHVLLS 56 L I G GK+T +L+ L+ D + EPG + R +LL Sbjct: 2 LLIGLTGGIATGKSTVSKMLQDELKIPVIDADLIARQVVEPGKPAYKQIVQIFGREILLP 61 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDS----- 111 A + I A + + + PA+ F Y Sbjct: 62 DQTINRDALGKLIFNDADKRRQLNGAVHPAVFREM------FRQILKCYIRGERIAVLDV 115 Query: 112 ----SQHLFLDSLQEISVQEVMPDCTIILDLPVDIG-LKRVQNRYSLRESACLDYFERKD 166 L L+ + + D + L+R+ R S+ E+ + Sbjct: 116 PLLFEGGQLLRYLRRVV--------VVYCD---EQAELQRLMARNSMSEADARSRMNAQ- 163 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 + I EKRR A ++D++ S ++ + + EL Sbjct: 164 MSIEEKRR-----RAD------IVIDNSGSLEATRNQVRAVFAEL 197 >gi|306816672|ref|ZP_07450804.1| hypothetical protein ECNC101_08639 [Escherichia coli NC101] gi|305850237|gb|EFM50696.1| hypothetical protein ECNC101_08639 [Escherichia coli NC101] Length = 232 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 65/246 (26%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRYPQVEVPGFR 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225 Query: 207 IVWELV 212 + + Sbjct: 226 AIHAAL 231 >gi|303236288|ref|ZP_07322881.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] gi|302483500|gb|EFL46502.1| conserved hypothetical protein [Prevotella disiens FB035-09AN] Length = 253 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 32/143 (22%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLS 56 M+ +F++F +G G GK+T +L +L K Y+V V + R Sbjct: 1 MSKEIFVAFATQKG--GIGKSTVTALAASYLHNVKGYNVAVVDCDDPQHSIHGLRE---- 54 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E G + F A DH + + AY + ++ + Sbjct: 55 ---HEMGLIDSSTYFKALACDHFRRMKKN------------------AYTIVKSNAVNAL 93 Query: 117 LDSLQEISVQEVMPDCTIILDLP 139 D+ + I+ ++V PD + D+P Sbjct: 94 DDAERMIATEDVKPD-VVFFDMP 115 >gi|256158549|ref|ZP_05456443.1| ABC transporter related protein [Brucella ceti M490/95/1] gi|265997065|ref|ZP_06109622.1| ABC transporter [Brucella ceti M490/95/1] gi|262551533|gb|EEZ07523.1| ABC transporter [Brucella ceti M490/95/1] Length = 184 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55 MN G F++ G GAGK+T + +L + + V VTR+ A AR V Sbjct: 29 MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87 Query: 56 SCGVDEFGAEA--EAIVFAAAR 75 G E + AA+R Sbjct: 88 DPLAGSCGTLTIEENLALAASR 109 >gi|254691447|ref|ZP_05154701.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella abortus bv. 6 str. 870] gi|256256632|ref|ZP_05462168.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella abortus bv. 9 str. C68] gi|260757067|ref|ZP_05869415.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 6 str. 870] gi|260882877|ref|ZP_05894491.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 9 str. C68] gi|297249988|ref|ZP_06933689.1| spermidine/putrescine transport system ATP-binding protein [Brucella abortus bv. 5 str. B3196] gi|260677175|gb|EEX63996.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 6 str. 870] gi|260872405|gb|EEX79474.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 9 str. C68] gi|297173857|gb|EFH33221.1| spermidine/putrescine transport system ATP-binding protein [Brucella abortus bv. 5 str. B3196] Length = 353 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPDDGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|241894782|ref|ZP_04782078.1| ABC superfamily ATP binding cassette transporter, ABC protein [Weissella paramesenteroides ATCC 33313] gi|241871994|gb|EER75745.1| ABC superfamily ATP binding cassette transporter, ABC protein [Weissella paramesenteroides ATCC 33313] Length = 378 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 +G F + G G+GKTT + L+ FL+ + D+ Sbjct: 38 AGKFYTLLGPSGSGKTTILRLIAGFLEATSGDILF 72 >gi|227822695|ref|YP_002826667.1| putative ATP-binding component of ABC transporter [Sinorhizobium fredii NGR234] gi|227341696|gb|ACP25914.1| putative ATP-binding component of ABC transporter [Sinorhizobium fredii NGR234] Length = 353 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 58/165 (35%), Gaps = 26/165 (15%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV------TREPGGTPAAEAARHVLLS 56 G F+SF G G GKTT + ++ F N + + T +P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETPSNGKIVIDGTDQGTLKPNQRNIGMVFQAYALF 87 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSS 112 ++ A + A A ++ ++ L ++ L DRF YQ Sbjct: 88 PNMNVQDNVAFGLKVAGASKADIDTRVKQML---GLIKLEHLADRFP-----YQLSGGQQ 139 Query: 113 QHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLRE 155 Q + L V P ++LD L R+ R +R+ Sbjct: 140 QRVALAR-----ALAVKPQ-VLLLDEPLSALDAKIRISLREEIRQ 178 >gi|255086209|ref|XP_002509071.1| predicted protein [Micromonas sp. RCC299] gi|226524349|gb|ACO70329.1| predicted protein [Micromonas sp. RCC299] Length = 182 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 36/122 (29%), Gaps = 32/122 (26%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 SG + G+ +GK+T + L L+ K V V EP + L Sbjct: 5 SGCLVIMCGVPCSGKSTAAAELASALREKGIRVTVVDEPS----------LHLHRNAGYA 54 Query: 63 GAEAE-----AIVFAAARLDHVENVIRPALMEGKILLCD--------RFLDSSYAYQGER 109 E + R H +G +++ D R+ A Q Sbjct: 55 NGHVEKNTRGLLKATVDRSLH---------RDGPVVIVDACNGIKGYRYELWCIARQVGA 105 Query: 110 DS 111 S Sbjct: 106 RS 107 >gi|46255248|ref|YP_006160.1| transporter [Thermus thermophilus HB27] gi|46198097|gb|AAS82507.1| transporter [Thermus thermophilus HB27] Length = 259 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 2/84 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE--PGGTPAAEAARHVLLSCGVDE 61 G F++ G G+GKTT + LL L+ +V + E P A A + +LS + Sbjct: 27 GEFLAVLGPNGSGKTTLLRLLAGELRPTEGEVFLLGESLAVYGPQALARQRAVLSQVREM 86 Query: 62 FGAEAEAIVFAAARLDHVENVIRP 85 V RL H+ RP Sbjct: 87 AFPYTAYEVAFLGRLPHLVGRERP 110 >gi|40253763|dbj|BAD05702.1| putative RGH1A [Oryza sativa Japonica Group] Length = 978 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA-ARHVLLSCGVDEFGAEAEAI 69 GI G GKTT + + L+ +D G P + R +++ + + Sbjct: 202 GIGGLGKTTLVKAVYEKLK-PGFDCGAFVPVGQNPDMKKVLRDIIIDLDKKTYTDFNITL 260 Query: 70 VFAAARLDHVENVIRPALMEGKILLCD 96 + N ++ L E +I++ D Sbjct: 261 F---DERQLI-NKLQEILQEKRIVIDD 283 >gi|326516440|dbj|BAJ92375.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 203 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 36/156 (23%) Query: 6 FISF-EGIEGAGKTTHISLLKRFLQRKNYDVH----VTREP--GGTPAAEAARHVLLSCG 58 FI+F G G+GK T S + + + R GT E ++ Sbjct: 60 FIAFVLGGPGSGKGTQCSRIASDF---GFSHVSAGDLLRNEISSGTDQGEWILEIIREGR 116 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + ++ V I SS A + D + Sbjct: 117 IVP----------SEITVELVRKAIE----------------SSTAKRVLIDGFPRCEEN 150 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLR 154 + + PD + D P D +KR+ +R R Sbjct: 151 RIAFEKITGTEPDLVLFFDCPEDEMVKRLLSRNQGR 186 >gi|312865141|ref|ZP_07725369.1| ABC transporter, ATP-binding protein [Streptococcus downei F0415] gi|311099252|gb|EFQ57468.1| ABC transporter, ATP-binding protein [Streptococcus downei F0415] Length = 251 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 18/28 (64%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQ 29 N G FI+ G G+GKTT + ++ R L+ Sbjct: 25 NKGEFITILGTSGSGKTTTLKMINRLLE 52 >gi|257470027|ref|ZP_05634119.1| guanylate kinase [Fusobacterium ulcerans ATCC 49185] gi|317064252|ref|ZP_07928737.1| guanylate kinase [Fusobacterium ulcerans ATCC 49185] gi|313689928|gb|EFS26763.1| guanylate kinase [Fusobacterium ulcerans ATCC 49185] Length = 185 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 18/41 (43%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 M G G GAGK+T L+++ L TREP Sbjct: 1 MPKGNLYVVSGPSGAGKSTICRLVRKMLGINLATSATTREP 41 >gi|254774818|ref|ZP_05216334.1| hypothetical protein MaviaA2_09125 [Mycobacterium avium subsp. avium ATCC 25291] Length = 535 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 60/205 (29%), Gaps = 38/205 (18%) Query: 11 GIEGAGKTTHISLLKRF--LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G+ +GKTT L L + DV R G P + Sbjct: 357 GLPASGKTTLARALAGRLGLVHLSSDVARKRMAGIPPTRRGSDEFGSGLYNPAMTRNT-- 414 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 +AA R D L G ++ D L++++ + Sbjct: 415 --YAALRRDAAR-----WLRRGHGVVVD------------ATFGNPGERAQLRQLAHRLG 455 Query: 129 MPDCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD- 186 + D ++L D D + R++ R + + E + + R F PD Sbjct: 456 V-DLHLVLCDADDDTLIARLKRRATEQGVVSDARIE-----LWPQLRAAF-----TPPDE 504 Query: 187 --RCHIVDSAHSFQSVATNILNIVW 209 VD+ + L ++ Sbjct: 505 QASVLRVDATRDTEETVEQALGLLR 529 >gi|148822503|ref|YP_001287257.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis F11] gi|148721030|gb|ABR05655.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase subunit 1 + adenylylsulfate kinase [Mycobacterium tuberculosis F11] Length = 614 Score = 38.5 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + F G+ G+GK++ L++R L K + +L Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484 Query: 63 GAEAEAIVFAAARLDHVENV 82 G A+ A R +++ + Sbjct: 485 GLNADLGFSMADRAENLRRL 504 >gi|326927397|ref|XP_003209879.1| PREDICTED: thymidine kinase 2, mitochondrial-like [Meleagris gallopavo] Length = 340 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 60/187 (32%), Gaps = 33/187 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV--LLSCGVDEFG 63 I EG +GKTT + + + +V EP ++ L+ +G Sbjct: 127 LICIEGNIASGKTTCLDYFAQT---TSIEVLT--EPVSKWRNVRGHNILGLMYQDASRWG 181 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-------SYAYQGERDSSQH-- 114 + + H + +I P + + +R + S + G+ + Sbjct: 182 ITLQTYIQLTMLEQHTKPMISP------VRMMERSIHSAKYIFVENLYRSGKMPEVDYVV 235 Query: 115 --LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 + D +Q + + D + L + +R++ R E + E Sbjct: 236 LSEWFDWIQN-NTDVSV-DLIVYLQTSPKVCYERLKRRCREEEKIIP-------LEYLEA 286 Query: 173 RRQIFLD 179 Q++ + Sbjct: 287 IHQLYEE 293 >gi|301629209|ref|XP_002943739.1| PREDICTED: alpha-glucoside transport ATP-binding protein AglK-like [Xenopus (Silurana) tropicalis] Length = 346 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 + G FI F G G GK+T + L+ Sbjct: 26 IKKGEFIVFVGPSGCGKSTLLRLIA 50 >gi|297661753|ref|XP_002809388.1| PREDICTED: guanylate kinase-like isoform 3 [Pongo abelii] gi|297661755|ref|XP_002809389.1| PREDICTED: guanylate kinase-like isoform 4 [Pongo abelii] gi|297661757|ref|XP_002809390.1| PREDICTED: guanylate kinase-like isoform 5 [Pongo abelii] Length = 197 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 35/223 (15%), Positives = 68/223 (30%), Gaps = 41/223 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M+ + G GAGK+T + L + + V H TR P G Sbjct: 1 MSGPRPVVLSGPSGAGKSTLLKRLFQEHSGIFGFSVSHTTRNPR--------------PG 46 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + R + I A G + + S A Q + ++ LD Sbjct: 47 EENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRICVLD 101 Query: 119 S----LQEISVQEVMPDCTIILDL-PVD--IGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++ I ++ P I + + P + +R++ R + E + + Sbjct: 102 VDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRRRNTETEESLAKRLAAAQADME- 157 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +P +V S + + E ++K Sbjct: 158 ---------SSKEPGLFDVVIVNDSLDQAYAELKEALSEEIKK 191 >gi|297203557|ref|ZP_06920954.1| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC 29083] gi|297148441|gb|EDY58568.2| ABC transporter ATP-binding protein [Streptomyces sviceus ATCC 29083] Length = 540 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 11/76 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-------REPGGTPAAEAARHVLLSCGVDEFG 63 G GAGKTT + L+ L+ V V+ + G R +L+S Sbjct: 37 GPNGAGKTTLLRLISGELKPHGGTVTVSGGLGVMRQFVGSVRDETTVRDLLVSVAPPRIQ 96 Query: 64 AEAEAIVFAAARLDHV 79 A+A+ R +H+ Sbjct: 97 EAAQAV----DRAEHL 108 >gi|296331136|ref|ZP_06873610.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674291|ref|YP_003865963.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151780|gb|EFG92655.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412535|gb|ADM37654.1| adenylyl-sulfate kinase [Bacillus subtilis subsp. spizizenii str. W23] Length = 197 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + R L + Y V ++L G + Sbjct: 33 GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 R +++ V + + +G I++ Sbjct: 76 SDEDRKENIRRIGEVAKLFVQQGTIVIT 103 >gi|294994843|ref|ZP_06800534.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis 210] Length = 614 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + F G+ G+GK++ L++R L K + +L Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484 Query: 63 GAEAEAIVFAAARLDHVENV 82 G A+ A R +++ + Sbjct: 485 GLNADLGFSMADRAENLRRL 504 >gi|284162041|ref|YP_003400664.1| hypothetical protein Arcpr_0930 [Archaeoglobus profundus DSM 5631] gi|284012038|gb|ADB57991.1| protein of unknown function ATP binding protein [Archaeoglobus profundus DSM 5631] Length = 232 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 3/92 (3%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK+T + +L+ N V +P P A R + ++ + Sbjct: 3 IVVVGPAGSGKSTFVKNFSEYLKEYNVKVVNL-DPASDPIYRADRDIREFVRTEDVMKKF 61 Query: 67 EAIVFAAAR--LDHVENVIRPALMEGKILLCD 96 + + A ++ I ++EG ++ D Sbjct: 62 KLGINGALLKSIELSLEHIDELMLEGDYIIYD 93 >gi|222086488|ref|YP_002545022.1| ABC transporter [Agrobacterium radiobacter K84] gi|221723936|gb|ACM27092.1| ABC transporter [Agrobacterium radiobacter K84] Length = 353 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 30/169 (17%) Query: 1 MN--SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAAR 51 M+ G FISF G G GKTT + ++ F L D + P + Sbjct: 24 MHIEKGEFISFLGPSGCGKTTVLRMIAGFESPTAGTLTINGKDQRPLK-PNQRNIGMVFQ 82 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKIL----LCDRFLDSSYAYQG 107 L + A + A ++ ++ L ++ L DR+ YQ Sbjct: 83 AYALFPNMTVHDNVAFGLKVAGMAKPDIDKRVKEML---GLIKLDHLADRYP-----YQM 134 Query: 108 ERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 Q + L + I+ V P ++LD L RV R +R Sbjct: 135 SGGQQQRVALA--RAIA---VKPQ-VLLLDEPLSALDAKIRVSLREEIR 177 >gi|224004492|ref|XP_002295897.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209585929|gb|ACI64614.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 350 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 6/103 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G GKTT ++ L +L+ + ++V E + L VD A Sbjct: 29 IVLTGGPCGGKTTSLARLSPYLRERGFEVITCPEAFSLLVSNGMAFDYL-GAVDGMSAVV 87 Query: 67 EAIVFAAARLDHVENVIRPAL-MEGK--ILLCDRFLDSSYAYQ 106 + V +E+ L GK +LLCDR L AY Sbjct: 88 QDTVM--DIQIGLEDGFERVLRARGKPAVLLCDRGLMDGSAYM 128 >gi|163840884|ref|YP_001625289.1| adenylate kinase [Renibacterium salmoninarum ATCC 33209] gi|259494014|sp|A9WST7|KAD_RENSM RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|162954360|gb|ABY23875.1| adenylate kinase [Renibacterium salmoninarum ATCC 33209] Length = 193 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 68/224 (30%), Gaps = 54/224 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE------PGGTPAAEAARHVL 54 M + I G G+GK T + L T + G TP A+ + Sbjct: 1 MTR-MLIV--GPPGSGKGTQAEWISDRL---GIVAISTGDIFRANVKGETPLGLEAKKYM 54 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 ++ ++ RL E+V L++G R S+Q Sbjct: 55 ---DAGDYVPDSVTNKMVRDRLQQ-EDVQHGFLLDGY----------------PRTSAQV 94 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 LD + +S D + L + ++R+ R + D EK Sbjct: 95 NELDDI--LSAGGEKLDVVLQLTADDEELVRRLLGRAKESGRSDDD----------EKVI 142 Query: 175 QIFLDIARNQPDRCHI----------VDSAHSFQSVATNILNIV 208 + L++ Q + + VD + V I+ + Sbjct: 143 RHRLNLYHTQTEAVVVRYQKLGLLAKVDGIGAIDEVTDRIMAAI 186 >gi|147733507|sp|Q4UKH4|SRP54_RICFE RecName: Full=Signal recognition particle protein; AltName: Full=Fifty-four homolog Length = 449 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT S L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASSKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 152 >gi|123473452|ref|XP_001319914.1| Adenylate kinase family protein [Trichomonas vaginalis G3] gi|121902708|gb|EAY07691.1| Adenylate kinase family protein [Trichomonas vaginalis G3] Length = 206 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Query: 134 IILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + +D+P + KR+ NR S R + +++ V H + + ++ V Sbjct: 121 LFIDVPDEELKKRLLNRGLSSGRIDDNEESIKKRLVTYHNQTEAVIGKF--RSENKIISV 178 Query: 192 DSAHSFQSVATNI---LNIVWELVQKR 215 D H +V +I L +W ++K+ Sbjct: 179 DGNHPIDAVHDDIVVQLKKLWTDLEKK 205 >gi|90414436|ref|ZP_01222412.1| adenylylsulfate kinase [Photobacterium profundum 3TCK] gi|90324441|gb|EAS41000.1| adenylylsulfate kinase [Photobacterium profundum 3TCK] Length = 208 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 49/144 (34%), Gaps = 40/144 (27%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T L+ L Y + LL G + Sbjct: 39 FTGLSGAGKSTVAGALENRLVELGYHTY-----------------LLDGDNVRHGLCRDL 81 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + R +++ V + G I+L A+ + + L V Sbjct: 82 GFSSEDRRENIRRIGEVAKLMADAGLIVLS--------AFISPHRAERQL---------V 124 Query: 126 QEVMPD---CTIILDLPVDIGLKR 146 ++++PD + +D +D+ KR Sbjct: 125 KDLLPDGEFIEVFVDASLDVCEKR 148 >gi|15608426|ref|NP_215802.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis H37Rv] gi|15840734|ref|NP_335771.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis CDC1551] gi|121637214|ref|YP_977437.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661073|ref|YP_001282596.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis H37Ra] gi|167969610|ref|ZP_02551887.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis H37Ra] gi|215403125|ref|ZP_03415306.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis 02_1987] gi|215410922|ref|ZP_03419730.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis 94_M4241A] gi|215426605|ref|ZP_03424524.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis T92] gi|215430170|ref|ZP_03428089.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis EAS054] gi|215445462|ref|ZP_03432214.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis T85] gi|218752990|ref|ZP_03531786.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis GM 1503] gi|219557184|ref|ZP_03536260.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis T17] gi|224989689|ref|YP_002644376.1| sulfate adenylyltransferase subunit 1 [Mycobacterium bovis BCG str. Tokyo 172] gi|253799669|ref|YP_003032670.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis KZN 1435] gi|254231543|ref|ZP_04924870.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase [Mycobacterium tuberculosis C] gi|254364182|ref|ZP_04980228.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase [Mycobacterium tuberculosis str. Haarlem] gi|254550292|ref|ZP_05140739.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186222|ref|ZP_05763696.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis CPHL_A] gi|260200336|ref|ZP_05767827.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis T46] gi|260204541|ref|ZP_05772032.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis K85] gi|289442724|ref|ZP_06432468.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis T46] gi|289446880|ref|ZP_06436624.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis CPHL_A] gi|289554925|ref|ZP_06444135.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis KZN 605] gi|289569295|ref|ZP_06449522.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis T17] gi|289573948|ref|ZP_06454175.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis K85] gi|289745031|ref|ZP_06504409.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis 02_1987] gi|289749838|ref|ZP_06509216.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis T92] gi|289753362|ref|ZP_06512740.1| sulfate adenylate transferase [Mycobacterium tuberculosis EAS054] gi|289757385|ref|ZP_06516763.1| sulfate adenylate transferase [Mycobacterium tuberculosis T85] gi|289761440|ref|ZP_06520818.1| sulfate adenyltransferase (subunit 1) [Mycobacterium tuberculosis GM 1503] gi|297633835|ref|ZP_06951615.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis KZN 4207] gi|297730822|ref|ZP_06959940.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis KZN R506] gi|298524789|ref|ZP_07012198.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis 94_M4241A] gi|306775454|ref|ZP_07413791.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu001] gi|306781633|ref|ZP_07419970.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu002] gi|306784007|ref|ZP_07422329.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu003] gi|306788370|ref|ZP_07426692.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu004] gi|306792697|ref|ZP_07430999.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu005] gi|306797103|ref|ZP_07435405.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu006] gi|306802983|ref|ZP_07439651.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu008] gi|306971564|ref|ZP_07484225.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu010] gi|307079277|ref|ZP_07488447.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu011] gi|307083847|ref|ZP_07492960.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu012] gi|313658154|ref|ZP_07815034.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis KZN V2475] gi|1706274|sp|Q10600|CYSNC_MYCTU RecName: Full=Bifunctional enzyme CysN/CysC; Includes: RecName: Full=Sulfate adenylyltransferase subunit 1; AltName: Full=ATP-sulfurylase large subunit; AltName: Full=Sulfate adenylate transferase; Short=SAT; Includes: RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase gi|1322410|emb|CAA97752.1| PROBABLE BIFUNCTIONAL ENZYME CYSN/CYSC: SULFATE ADENYLTRANSFERASE (SUBUNIT 1) + ADENYLYLSULFATE KINASE [Mycobacterium tuberculosis H37Rv] gi|13880925|gb|AAK45585.1| sulfate adenylate transferase, subunit 1 [Mycobacterium tuberculosis CDC1551] gi|121492861|emb|CAL71332.1| Probable bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600602|gb|EAY59612.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase [Mycobacterium tuberculosis C] gi|134149696|gb|EBA41741.1| bifunctional enzyme cysN/cysC: sulfate adenyltransferase (subunit 1) + adenylylsulfate kinase [Mycobacterium tuberculosis str. Haarlem] gi|148505225|gb|ABQ73034.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium tuberculosis H37Ra] gi|224772802|dbj|BAH25608.1| sulfate adenylyltransferase subunit 1 [Mycobacterium bovis BCG str. Tokyo 172] gi|253321172|gb|ACT25775.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis KZN 1435] gi|289415643|gb|EFD12883.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis T46] gi|289419838|gb|EFD17039.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis CPHL_A] gi|289439557|gb|EFD22050.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis KZN 605] gi|289538379|gb|EFD42957.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis K85] gi|289543049|gb|EFD46697.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis T17] gi|289685559|gb|EFD53047.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis 02_1987] gi|289690425|gb|EFD57854.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis T92] gi|289693949|gb|EFD61378.1| sulfate adenylate transferase [Mycobacterium tuberculosis EAS054] gi|289708946|gb|EFD72962.1| sulfate adenyltransferase (subunit 1) [Mycobacterium tuberculosis GM 1503] gi|289712949|gb|EFD76961.1| sulfate adenylate transferase [Mycobacterium tuberculosis T85] gi|298494583|gb|EFI29877.1| bifunctional enzyme cysN/cysC [Mycobacterium tuberculosis 94_M4241A] gi|308216074|gb|EFO75473.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu001] gi|308325594|gb|EFP14445.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu002] gi|308331242|gb|EFP20093.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu003] gi|308335058|gb|EFP23909.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu004] gi|308338866|gb|EFP27717.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu005] gi|308342551|gb|EFP31402.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu006] gi|308350357|gb|EFP39208.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu008] gi|308358934|gb|EFP47785.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu010] gi|308362897|gb|EFP51748.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu011] gi|308366482|gb|EFP55333.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis SUMu012] gi|323720242|gb|EGB29341.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis CDC1551A] gi|326902907|gb|EGE49840.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis W-148] gi|328459415|gb|AEB04838.1| bifunctional sulfate adenyltransferase/adenylylsulfate kinase cysN/cysC [Mycobacterium tuberculosis KZN 4207] Length = 614 Score = 38.5 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + F G+ G+GK++ L++R L K + +L Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484 Query: 63 GAEAEAIVFAAARLDHVENV 82 G A+ A R +++ + Sbjct: 485 GLNADLGFSMADRAENLRRL 504 >gi|332020743|gb|EGI61147.1| Putative adenylate kinase isoenzyme F38B2.4 [Acromyrmex echinatior] Length = 197 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 39/210 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE--- 67 G G GK T + +++ + + + R + S +A Sbjct: 8 GGPGCGKGTQCDRI---IEKYGF--------LHLSSGDLLRAEVASGSERGASLQALMSK 56 Query: 68 -AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 V L+ ++ + A EG + + G L + Sbjct: 57 GLFVPTDIVLELIKEQMDKAREEGT-------TKTGFLIDGYPREKDQGILFE------E 103 Query: 127 EVMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIA 181 +V P D I D+ D KR+ R ++ + A + +KR +IF +I Sbjct: 104 KVCPVDLIIFFDVANDTLEKRLLGRAAMSQRADDN------EETIKKRIEIFNGKNNEIV 157 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D+ +++ + + + L Sbjct: 158 EYYKDKVIRINAEGTVDEIFAEVTKAFDTL 187 >gi|323465307|gb|ADX77460.1| deoxyadenosIne kinase [Staphylococcus pseudintermedius ED99] Length = 221 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 28/176 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK++ + L + T + L +F + Sbjct: 12 ITIAGTVGVGKSSLTRAIAEKLNFR------------TSYENVEHNPYLDKFYHDFKRWS 59 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFLDS 119 + + + R G + DR + + QG + Sbjct: 60 FHLQMY-FLAERFKEQKRMFEYGGGFV-QDRSIYEDVDIFAKMHVEQGTMTPEDFKTYSN 117 Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHE 171 L E ++ PD I L+ + L+R+Q R E +Y+E ++ Sbjct: 118 LFEAMVLTPYFPKPDVLIYLESDYEAVLERIQARGRQMEIETNPEYWE---MLFQR 170 >gi|239999853|ref|ZP_04719777.1| putative signal recognition particle protein [Neisseria gonorrhoeae 35/02] gi|268595664|ref|ZP_06129831.1| signal recognition particle protein [Neisseria gonorrhoeae 35/02] gi|268549053|gb|EEZ44471.1| signal recognition particle protein [Neisseria gonorrhoeae 35/02] Length = 417 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNITVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|154685976|ref|YP_001421137.1| hypothetical protein RBAM_015430 [Bacillus amyloliquefaciens FZB42] gi|166221083|sp|A7Z4I0|CYSC_BACA2 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|154351827|gb|ABS73906.1| CysC [Bacillus amyloliquefaciens FZB42] Length = 197 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 34/139 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + R L + Y V ++L G + Sbjct: 33 GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75 Query: 71 FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R +++ V + + +G I++ A+ + + + E E Sbjct: 76 SDDDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRDQVRELVAEGEFNE 127 Query: 128 VMPDCTIILDLPVDIGLKR 146 I + +DI KR Sbjct: 128 ------IYVKCDLDICEKR 140 >gi|31792478|ref|NP_854971.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium bovis AF2122/97] gi|31618067|emb|CAD94178.1| PROBABLE BIFUNCTIONAL ENZYME CYSN/CYSC: SULFATE ADENYLTRANSFERASE (SUBUNIT 1) + ADENYLYLSULFATE KINASE [Mycobacterium bovis AF2122/97] Length = 614 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 29/80 (36%), Gaps = 17/80 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + F G+ G+GK++ L++R L K + +L Sbjct: 442 RGKTVWFTGLSGSGKSSVAMLVERKLLEKGISAY-----------------VLDGDNLRH 484 Query: 63 GAEAEAIVFAAARLDHVENV 82 G A+ A R +++ + Sbjct: 485 GLNADLGFSMADRAENLRRL 504 >gi|258646934|ref|ZP_05734403.1| dethiobiotin synthase [Dialister invisus DSM 15470] gi|260404375|gb|EEW97922.1| dethiobiotin synthase [Dialister invisus DSM 15470] Length = 222 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Query: 1 MNSGLFISFEGIEG-AGKTTHISLLKRFLQRKNYDV 35 M GLFI+ G + GKT +LL + L+ YDV Sbjct: 1 MGRGLFIT--GTDTDVGKTYVTALLVKTLRSAGYDV 34 >gi|240169537|ref|ZP_04748196.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium kansasii ATCC 12478] Length = 616 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 19/88 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK++ + +++ L + +L G A+ Sbjct: 450 FTGLSGAGKSSVATRVEQKLLESGVPAY-----------------VLDGDNLRHGLNADL 492 Query: 69 IVFAAARLDHVENVIRPA--LMEGKILL 94 A R +++ + A L + ++ Sbjct: 493 GFSMADRAENLRRLAHVAVLLADCGHVV 520 >gi|257065010|ref|YP_003144682.1| Adenylate kinase [Slackia heliotrinireducens DSM 20476] gi|256792663|gb|ACV23333.1| Adenylate kinase [Slackia heliotrinireducens DSM 20476] Length = 208 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 37/231 (16%), Positives = 67/231 (29%), Gaps = 60/231 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA--AEAARHVLLSCGVDEFGA 64 I G GAGK T + L E G + R + E G Sbjct: 3 IVLLGAPGAGKGTQAAKLVA-------------EYGTAHISTGDILRAAVRDQ--TELGK 47 Query: 65 EAEAIVFAAAR------LDHV-ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 +A+A + A +D + E + +P G + D F ++ Q + + Sbjct: 48 QAKAFMDAGDLVPDSLIIDLMNERLQQPDCETGF--ILDGFPRTTA--QAVALDALLSEI 103 Query: 118 DSLQEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESA----CLDY--------FER 164 P D +++D+ ++ +KR+ R ++ D + Sbjct: 104 K----------RPLDAALLVDVDPEVIVKRLSARRCCKDCGNIGTAADASCPKCGGEMYQ 153 Query: 165 KDVMIHEKRRQIFLDIAR---------NQPDRCHIVDSAHSFQSVATNILN 206 +D R A+ D VD V ++ Sbjct: 154 RDDDNEATVRNRLDVYAKSTAPLVDYYRGKDLLISVDGDRPVDDVYADVKK 204 >gi|227887692|ref|ZP_04005497.1| lipoprotein [Escherichia coli 83972] gi|227835088|gb|EEJ45554.1| lipoprotein [Escherichia coli 83972] Length = 237 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ + +G +L+ DR+ Sbjct: 77 KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 135 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 136 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 186 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 187 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 230 Query: 207 IVWELV 212 + + Sbjct: 231 AIQAAL 236 >gi|159122552|gb|EDP47673.1| ABC multidrug transporter, putative [Aspergillus fumigatus A1163] Length = 1216 Score = 38.5 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLL 55 G F++F G G GK+T I+LL RF Y R + R + L Sbjct: 995 GKFVAFVGPSGCGKSTMINLLARFYDPTSGYIAVNDRPIHDLSPQDHRRRLAL 1047 >gi|313239246|emb|CBY14199.1| unnamed protein product [Oikopleura dioica] Length = 606 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 17/74 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T L+ L K + +L G + Sbjct: 38 FTGLSGAGKSTIAMKLEEHLIAKGVPAY-----------------VLDGDNVRHGLNKDL 80 Query: 69 IVFAAARLDHVENV 82 A R +++ + Sbjct: 81 GFSLADREENIRRI 94 >gi|294667066|ref|ZP_06732292.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603158|gb|EFF46583.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 658 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+ + L Y +L G + Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R G I+L S + D + + Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + +D+P+ + R Sbjct: 590 --------VFVDVPLAVAEAR 602 >gi|312111706|ref|YP_003990022.1| signal recognition particle-docking protein FtsY [Geobacillus sp. Y4.1MC1] gi|311216807|gb|ADP75411.1| signal recognition particle-docking protein FtsY [Geobacillus sp. Y4.1MC1] Length = 330 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I L L+ + V + G T A A L + GAE Sbjct: 123 ILFVGVNGVGKTTTIGKLAHKLKSEGKTVMLAA--GDTFRAGAIEQ--LEVWGERVGAEV 178 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCD 96 + + + I+ A G +LLCD Sbjct: 179 IKQTAGSDPAAVIYDAIQAAKARGADVLLCD 209 >gi|291614826|ref|YP_003524983.1| signal recognition particle-docking protein FtsY [Sideroxydans lithotrophicus ES-1] gi|291584938|gb|ADE12596.1| signal recognition particle-docking protein FtsY [Sideroxydans lithotrophicus ES-1] Length = 315 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + Q + V + G AAR L+ G Sbjct: 119 GVNGAGKTTSIGKLAKHFQNQGKSVLLA---AGDTFRAAAREQLMEWG--RRNDVTVIAQ 173 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + + + ++ A G ++L D Sbjct: 174 QSGDAAAVIYDAVQAAQARGIDVVLAD 200 >gi|254700687|ref|ZP_05162515.1| ABC transporter related protein [Brucella suis bv. 5 str. 513] Length = 186 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55 MN G F++ G GAGK+T + +L + + V VTR+ A AR V Sbjct: 29 MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRKSTADRAGLVAR-VFQ 87 Query: 56 SCGVDEFGAEA--EAIVFAAAR 75 G E + AA+R Sbjct: 88 DPLAGSCGTLTIEENLALAASR 109 >gi|261856095|ref|YP_003263378.1| adenylylsulfate kinase [Halothiobacillus neapolitanus c2] gi|261836564|gb|ACX96331.1| adenylylsulfate kinase [Halothiobacillus neapolitanus c2] Length = 198 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T L+ L ++ R LL G ++ Sbjct: 29 FTGLSGSGKSTIAGALEHALFQQGQ-----------------RTYLLDGDNVRHGLNSDL 71 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 A R++++ V + + G I+L Sbjct: 72 GFSDADRVENIRRIGEVAKLMVDAGLIVLA 101 >gi|170291202|ref|YP_001738018.1| GTP-binding signal recognition particle [Candidatus Korarchaeum cryptofilum OPF8] gi|170175282|gb|ACB08335.1| GTP-binding signal recognition particle SRP54 G- domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 437 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 18/126 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GIEG+GKTT ++ L +L ++ V + PA++ L+ + F E++ Sbjct: 108 GIEGSGKTTTVAKLAFWLSKRFGKVGIISADVMRPASKLQIEQLVGPDIPVFSKESK--- 164 Query: 71 FAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 ++ + I ++ D R + + L + +E+ Sbjct: 165 ---DPVEIMREGIEFFKRERYNFVIID---------TAGRHKDESSLMSELD--AYREIG 210 Query: 130 PDCTII 135 PD I+ Sbjct: 211 PDLVIL 216 >gi|148244853|ref|YP_001219547.1| cell division transporter substrate-binding protein FtsY [Candidatus Vesicomyosocius okutanii HA] gi|146326680|dbj|BAF61823.1| cell division transporter substrate-binding protein FtsY [Candidatus Vesicomyosocius okutanii HA] Length = 319 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + Q + V + G T A A + + + A+ + Sbjct: 124 GVNGAGKTTLIGKLAKSFQNQGKSVMLAA--GDTFRAAAIEQLKIWGQRNNIPVVAKTL- 180 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + + A + ILL D Sbjct: 181 -GADTASVIFDAYQSAQAKNIDILLAD 206 >gi|62317068|ref|YP_222921.1| spermidine/putrescine ABC transporter ATP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|83269061|ref|YP_418352.1| spermidine/putrescine ABC transporter ATPase [Brucella melitensis biovar Abortus 2308] gi|189022333|ref|YP_001932074.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella abortus S19] gi|237816628|ref|ZP_04595620.1| polyamine ABC transporter, ATP-binding protein [Brucella abortus str. 2308 A] gi|254698355|ref|ZP_05160183.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella abortus bv. 2 str. 86/8/59] gi|254731799|ref|ZP_05190377.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella abortus bv. 4 str. 292] gi|260544304|ref|ZP_05820125.1| spermidine/putrescine ABC transporter [Brucella abortus NCTC 8038] gi|260759563|ref|ZP_05871911.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 4 str. 292] gi|260762808|ref|ZP_05875140.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 2 str. 86/8/59] gi|62197261|gb|AAX75560.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella abortus bv. 1 str. 9-941] gi|82939335|emb|CAJ12276.1| Disease resistance protein:ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase:Spermidine/putrescine ABC transpo [Brucella melitensis biovar Abortus 2308] gi|189020907|gb|ACD73628.1| spermidine/putrescine ABC transporter, ATP-binding protein [Brucella abortus S19] gi|237787441|gb|EEP61657.1| polyamine ABC transporter, ATP-binding protein [Brucella abortus str. 2308 A] gi|260097575|gb|EEW81449.1| spermidine/putrescine ABC transporter [Brucella abortus NCTC 8038] gi|260669881|gb|EEX56821.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 4 str. 292] gi|260673229|gb|EEX60050.1| spermidine/putrescine ABC transporter ATPase subunit [Brucella abortus bv. 2 str. 86/8/59] Length = 353 Score = 38.5 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 54/178 (30%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF-------LQRKNYDVHVTREPGGTPAAEAARHVLL 55 G F+SF G G GKTT + ++ F ++ DV R P + L Sbjct: 28 KGEFVSFLGPSGCGKTTVLRMIAGFETSDDGSIEIDGKDVVNLR-PNQRNIGMVFQAYAL 86 Query: 56 SCGVD-----------------EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRF 98 + E A + ++ + RLDH L DR+ Sbjct: 87 FPNMTVAQNVSFGLRVSGKSRSEIDATVKEML-SLIRLDH---------------LADRY 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 YQ Q + L + ++ P ++LD L R+ R +R Sbjct: 131 P-----YQMSGGQQQRVALA--RALAT---KPQ-VLLLDEPLSALDAKIRISLREEIR 177 >gi|326385853|ref|ZP_08207480.1| hypothetical protein Y88_2909 [Novosphingobium nitrogenifigens DSM 19370] gi|326209642|gb|EGD60432.1| hypothetical protein Y88_2909 [Novosphingobium nitrogenifigens DSM 19370] Length = 812 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 5/64 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA--EAARHVLLSCGVDEF 62 + I G GAGKTT + L + + V G A E R +L+ Sbjct: 243 MLI---GTTGAGKTTQLRKLVTEARERGQRCVVFDLTGAFVEAFYEEGRDHILNPMDQRC 299 Query: 63 GAEA 66 Sbjct: 300 PPWT 303 >gi|292491576|ref|YP_003527015.1| cytoplasmic protein [Nitrosococcus halophilus Nc4] gi|291580171|gb|ADE14628.1| putative cytoplasmic protein [Nitrosococcus halophilus Nc4] Length = 451 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 19/130 (14%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GK+ L + L++K V V R P P + A+ + A + AA Sbjct: 136 GCGKSQTSRWLSQLLRKKGLQVAVIRHP--MPYGDLAQQAVQRFATP-------ADLEAA 186 Query: 74 ARLDHVENVIRPALMEGKILLCDRFL---DSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 P L G ++ + + Q E ++ L+ + + P Sbjct: 187 HCTIEEREEYEPHLAAGNVV----YAGIDYAQILAQAEGEADVILWDGGNNDF--PFIRP 240 Query: 131 DCTIILDLPV 140 D I+L + Sbjct: 241 DLHIVL-VDP 249 >gi|257440331|ref|ZP_05616086.1| cobalamin biosynthesis protein CbiD [Faecalibacterium prausnitzii A2-165] gi|257197177|gb|EEU95461.1| cobalamin biosynthesis protein CbiD [Faecalibacterium prausnitzii A2-165] Length = 638 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-REPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G GAGK+T + L L + V + R AR + L Sbjct: 37 GPNGAGKSTLLKTLAGQLAPQGGAVLLDGRSLTDYTGTARARKLALMLPHTRRTELTSCF 96 Query: 70 VFAAA 74 FAAA Sbjct: 97 EFAAA 101 >gi|226482300|emb|CAX73749.1| guanylate kinase [Schistosoma japonicum] Length = 107 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41 F G GAGK+T + +L + V H TR+P Sbjct: 8 VFSGPSGAGKSTVLQMLMEKFPNNFGFSVSHTTRKP 43 >gi|163803406|ref|ZP_02197281.1| cell division protein FtsY [Vibrio sp. AND4] gi|159172810|gb|EDP57655.1| cell division protein FtsY [Vibrio sp. AND4] Length = 410 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 213 GVNGVGKTTTIGKLAKQFQNQGKKVMLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 268 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 269 TGADSASVIFDAIEAAKARGVDVVIAD 295 >gi|158334995|ref|YP_001516167.1| hypothetical protein AM1_1833 [Acaryochloris marina MBIC11017] gi|158305236|gb|ABW26853.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 529 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 53/172 (30%), Gaps = 27/172 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L L + ++A R L +DE Sbjct: 343 RQGQIILMSGLSGSGKSTVAHRLAPHLNAIHIR------------SDAVRKHLAGISLDE 390 Query: 62 FGAEAEAIVFAA---ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 GA ++I A + + G ++ D Y + Q L Sbjct: 391 SGAGPDSIYTPAMTQRTYQRLRELGISLAQMGWTVILD------AKYDRVQLREQVLTQA 444 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 L +I VQ + PV R+QNR A D + Sbjct: 445 ELAQIPVQ------ILFCTAPVAELRSRLQNRRGDISDATPDLLVHQKQTFQ 490 >gi|149237312|ref|XP_001524533.1| opaque-specific ABC transporter CDR3 [Lodderomyces elongisporus NRRL YB-4239] gi|146452068|gb|EDK46324.1| opaque-specific ABC transporter CDR3 [Lodderomyces elongisporus NRRL YB-4239] Length = 1573 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 15/137 (10%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEA-- 66 G GAGKTT ++ L L V +R G P + + + E Sbjct: 945 GASGAGKTTLLNALSERLT---VGVITSGSRMVNGGPLDNDFQRSIGYVQQQDLHLETST 1001 Query: 67 --EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQE- 122 EA+ F+A + + +G + + D SSYA + L ++ + Sbjct: 1002 VREALQFSAYLRQ--PKDVSKSEKDGYVEKIIDLMEMSSYANAIVGVPGEGLNVEQRKRL 1059 Query: 123 -ISVQEV-MPDCTIILD 137 I+V+ V P + LD Sbjct: 1060 TIAVELVARPKLLVFLD 1076 >gi|76162572|gb|AAX30497.2| SJCHGC04111 protein [Schistosoma japonicum] Length = 86 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP 41 F G GAGK+T + +L + V H TR+P Sbjct: 8 VFSGPSGAGKSTVLQMLMEKFPNNFGFSVSHTTRKP 43 >gi|56475575|ref|YP_157164.1| transposition helper protein [Aromatoleum aromaticum EbN1] gi|56311618|emb|CAI06263.1| transposition helper protein [Aromatoleum aromaticum EbN1] Length = 265 Score = 38.1 bits (88), Expect = 0.80, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKT I+ L L + Y V TR +AAR L + ++ Sbjct: 110 GPPGVGKTHLIAGLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELARLDRFDLLI 169 Query: 71 ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 F+ R D E + L + +R+ S A Sbjct: 170 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 200 >gi|327263985|ref|XP_003216797.1| PREDICTED: adenylate kinase isoenzyme 1-like [Anolis carolinensis] Length = 219 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 38/216 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPG--GTPAAEAARHVLLSCGVDEFGAEAE 67 G G GK + + + + V + RE T A+A R ++L+ + G + Sbjct: 33 GGPGCGKGSQSMRMAQKYNFTHLAVGDLLREEAIRPTTRAKAIRDIMLNGALVPSGFIMD 92 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 ++ RL VENV +G I+ + L +E+ Sbjct: 93 LLM---DRLQKVENV------KGFIV------------ESFPREINQAKL--FEELV--G 127 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSL-RESACLDYFERKDVMIH----EKRRQIFLDIAR 182 +P+ I+ D + ++R+ R + + + R+ + H E +L Sbjct: 128 RLPNMVIVFDCSTETMIQRLLIRSQMGQRVDDHESIIRQRLETHYTQCEPIVAHYLQ--- 184 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSP 218 + V ++V ++++ S Sbjct: 185 --KGILRNIIGEEPPDIVFDKCCSVVDDVLKGATSK 218 >gi|316970514|gb|EFV54444.1| ATPase family protein [Trichinella spiralis] Length = 2858 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 36/125 (28%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ I G G+GKTT ++LK L + + T P + +L + Sbjct: 1615 GVIIV--GPSGSGKTTIWTVLKEALIKMGKQINTYTFNP---------KAMLKHRLLGYI 1663 Query: 63 GAEA----EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + ++ R ENV ++CD +++ Sbjct: 1664 DPDTREWCDGLLTHLCRKCVSENVW-------SWIVCD-------------GEIDPEWIE 1703 Query: 119 SLQEI 123 S+ + Sbjct: 1704 SMNSV 1708 >gi|302763679|ref|XP_002965261.1| hypothetical protein SELMODRAFT_270489 [Selaginella moellendorffii] gi|300167494|gb|EFJ34099.1| hypothetical protein SELMODRAFT_270489 [Selaginella moellendorffii] Length = 221 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 28/211 (13%), Positives = 69/211 (32%), Gaps = 45/211 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T + + + VH+ A + R + S + Sbjct: 34 GGPGSGKGTQCAKIVEKF---GF-VHL-------SAGDLLRAEINSGSANG--------- 73 Query: 71 FAAARLDHVENVIRPALMEGKILLCD---RFLDSSYAYQG-ERDSSQHLFLDSLQEISVQ 126 +I+ + EGKI+ + + L + A G ++ + + + Sbjct: 74 ----------TMIQNMIQEGKIVPSEVTVKLLQKAMAESGKDKFLIDGFPRNQENRAAFE 123 Query: 127 ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDI 180 + P+ + D P + R+ R R ++ ++ + E + Sbjct: 124 AVTGIEPEFILFFDCPQEEMEVRLLGRNQGRSDDNIETIRKRFKVFVESSLPVVDHY--- 180 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++ + V++ + + V +I + + Sbjct: 181 --DKKGKVRKVNAVKTKEEVFESIETLFQKF 209 >gi|284163600|ref|YP_003401879.1| ABC transporter [Haloterrigena turkmenica DSM 5511] gi|284013255|gb|ADB59206.1| ABC transporter related protein [Haloterrigena turkmenica DSM 5511] Length = 283 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 2/70 (2%) Query: 11 GIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEFGAEAEA 68 G G+GK+T + L L+ + E E AR + +LS D + Sbjct: 59 GPNGSGKSTLLKSLSNHLEPERGTVRIHGEELDTFNRKELARELGVLSQENDSLSSITVE 118 Query: 69 IVFAAARLDH 78 + R H Sbjct: 119 DLIYHGRYPH 128 >gi|261839021|gb|ACX98786.1| shikimic acid kinase I [Helicobacter pylori 52] gi|315586160|gb|ADU40541.1| shikimate kinase [Helicobacter pylori 35A] Length = 162 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 64/195 (32%), Gaps = 44/195 (22%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK++ L L+ +V T + R + G D F +F Sbjct: 11 GSGKSSLAQELGLALK---LEVLDTDMIISERVGLSVREIFEELGEDNFR------MFEK 61 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 +D ++ + P ++ + D+L+ + T Sbjct: 62 NLIDELKTLKTP------HVIST--------------GGGIVMHDNLKGLGT-------T 94 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS 193 L + + +KR+ + + D + K++ EKR+ ++ A I+D+ Sbjct: 95 FYLKMDFETLIKRLNQKEREKRPLLNDLTQAKEL--FEKRQALYEKNAS------FIIDA 146 Query: 194 AHSFQSVATNILNIV 208 + +L + Sbjct: 147 RGGLNNSLKQVLQFI 161 >gi|256084214|ref|XP_002578326.1| adenylate kinase [Schistosoma mansoni] gi|238663695|emb|CAZ34564.1| adenylate kinase, putative [Schistosoma mansoni] Length = 197 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 69/208 (33%), Gaps = 36/208 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK T L + H + + R + S + + + Sbjct: 16 GGPGSGKGTQCEKLVQKF-------HF----NHLSSGDLLRAEVQSG-----SPKGKELK 59 Query: 71 FAAARLDHVE-NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 R + V V+ L E I L D + + G ++ + Sbjct: 60 AMMERGELVPLEVVLALLKEAMIKLVD--KNCHFLIDGYPRELDQGI--KFEKEVCPCL- 114 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR------N 183 C I D+ ++ KR+ R + + + + I ++ R F ++ + Sbjct: 115 --CVINFDVSEEVMRKRLLKR-----AETSNRVDDNEETIVKRFR-TFNELTKPVIEHYK 166 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWEL 211 Q ++ +D++ + ++ + + + + Sbjct: 167 QQNKVITIDASGTVDAIFDKVNHELQKF 194 >gi|226366331|ref|YP_002784114.1| shikimate kinase [Rhodococcus opacus B4] gi|226244821|dbj|BAH55169.1| shikimate kinase [Rhodococcus opacus B4] Length = 169 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 63/200 (31%), Gaps = 40/200 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK+T L + L +D V E A + + G F A E Sbjct: 10 GPPGAGKSTIGRRLAQALDLTLFDTDVAVE---EEAGRTIAEIFVEEGEPAFRALEE--- 63 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 ++R A+ + ++ G + L+ + Sbjct: 64 ----------EIVRKAIESHEGIVS----------LGGGSILSERTRELLKGHT------ 97 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 I L++ V GLKR + + D + + KRR ++ +A R Sbjct: 98 --VIYLEISVAEGLKRTGTNTARPLLSGGDP-RQVYTELMRKRRPLYRQVASI---RIRT 151 Query: 191 VDSAHSFQSVATNILNIVWE 210 D S V ++ + E Sbjct: 152 -DG-RSPARVVQQLVAKLAE 169 >gi|115781726|ref|XP_784965.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115939854|ref|XP_001180859.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 700 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRK-NYD-VHVTREPGGTPAAEAARHVLLS-----CGV 59 I+ G G+GKT+ +++++ Q+ V V+R G T + +V+LS C Sbjct: 377 IAIHGPSGSGKTSIMAMVQENAQKHLGRPCVVVSRFLGTTSQSSTIINVILSIAQQICAA 436 Query: 60 DEFGAEAEAI 69 + +E I Sbjct: 437 FQIHDNSELI 446 >gi|89256930|ref|YP_514292.1| signal recognition particle receptor FtsY [Francisella tularensis subsp. holarctica LVS] gi|290953990|ref|ZP_06558611.1| signal recognition particle-docking protein FtsY [Francisella tularensis subsp. holarctica URFT1] gi|295312609|ref|ZP_06803361.1| signal recognition particle-docking protein FtsY [Francisella tularensis subsp. holarctica URFT1] gi|89144761|emb|CAJ80096.1| signal recognition particle receptor FtsY [Francisella tularensis subsp. holarctica LVS] Length = 331 Score = 38.1 bits (88), Expect = 0.81, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 G+ G GKTT I L + LQ + V + AA E R + E Sbjct: 134 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 190 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCD 96 A + N I A +G +++ D Sbjct: 191 --GADSASVIYNAIGSAKSKGIDVVIAD 216 >gi|328869580|gb|EGG17957.1| deoxyguanosine kinase [Dictyostelium fasciculatum] Length = 305 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 14/109 (12%) Query: 93 LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM-------PDCTIILDLPVDIGLK 145 ++ DR + S + + + + + S + P TI L + + Sbjct: 135 VILDRSVFSDWVFAENCRREGLISSEGFSKYSDKRKQLISTIEIPHTTIYLSVEPSECQR 194 Query: 146 RVQN--RYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 R+Q+ + +S L Y E D Q+FLD + + + +VD Sbjct: 195 RIQSLRKRECEQSIPLSYLEGLDSCY-----QVFLDEMKQRGSKVLVVD 238 >gi|329904219|ref|ZP_08273701.1| DNA helicase [Oxalobacteraceae bacterium IMCC9480] gi|327548104|gb|EGF32826.1| DNA helicase [Oxalobacteraceae bacterium IMCC9480] Length = 1973 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 12/135 (8%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 ++G + EG G GK+ I+ L L V E A E L S G+ Sbjct: 691 SAGKNLVIEGPPGTGKSQTITNLISHLLATGKTVLFVSE--KMAALEVVHRRLKSLGLGP 748 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F E A + + ++ + G + D + + ER + L+ L Sbjct: 749 FCL--ELHSSKAKKSEVLKQLGMALETAGTRTVAD------WEREAERLAVLRQELNELA 800 Query: 122 EISVQEVMP-DCTII 135 ++ +V P D TI Sbjct: 801 N-ALHKVYPNDLTIY 814 >gi|326918530|ref|XP_003205541.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1-like isoform 1 [Meleagris gallopavo] Length = 603 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 38 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 83 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ + I +P Sbjct: 84 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 131 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 132 FFEVFVDAPLHVCEQR 147 >gi|325957720|ref|YP_004293132.1| deoxyguanosine kinase [Lactobacillus acidophilus 30SC] gi|325334285|gb|ADZ08193.1| deoxyguanosine kinase [Lactobacillus acidophilus 30SC] gi|327184368|gb|AEA32815.1| deoxyguanosine kinase [Lactobacillus amylovorus GRL 1118] Length = 228 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 45/229 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF--GA 64 I G GAGK++ +L ++L G P E+ + + F Sbjct: 4 IVLSGPIGAGKSSLTGILSKYL-------------GTKPFYESVDD---NPVLPLFYADP 47 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERDSSQ--HLFLDSLQ 121 + A + L+ + I+ AL + +L DR + + +Q D + +D+ Sbjct: 48 KKYAFLLQVYFLNTRFHSIKDALTQDNNVL-DRSIYEDALFFQMNADIGRATPEEVDTYY 106 Query: 122 EISVQEVM----------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 E+ + +M PD + +++ D +KR+Q R E D ++ Sbjct: 107 EL-LHNMMGELDRMPKKNPDLLVHINVSYDTMIKRIQKRGRPYEQLSHD---STLEDYYK 162 Query: 172 KRRQIFLDIARNQPDRCHI-VDSAH--------SFQSVATNILNIVWEL 211 + + + + +D + V I++ + E+ Sbjct: 163 RLLRYYKPWYDKYDYSPKMEIDGDKYDFMSSEEDREIVLDQIVDKLKEV 211 >gi|283833317|ref|ZP_06353058.1| glutamine ABC transporter, ATP-binding protein [Citrobacter youngae ATCC 29220] gi|291070955|gb|EFE09064.1| glutamine ABC transporter, ATP-binding protein [Citrobacter youngae ATCC 29220] Length = 272 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 23/47 (48%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 ++ G G+GK+T I L+ + ++++ +P G A R + Sbjct: 52 VTILGPSGSGKSTLIRLINQLESLSGGEIYIDDKPIGQLRGAALRQL 98 >gi|262371737|ref|ZP_06065016.1| adenylate kinase [Acinetobacter junii SH205] gi|262311762|gb|EEY92847.1| adenylate kinase [Acinetobacter junii SH205] Length = 179 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYD 34 FI+ G G+GK+T L L+ + + Sbjct: 2 KFINIIGTTGSGKSTLARKLAEKLKIQYIE 31 >gi|221132496|ref|XP_002161775.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 4207 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 24/114 (21%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVH-VTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI 69 G G+GKT S+L+ L + V T P P R LL + ++ + Sbjct: 1970 GPSGSGKTCLWSMLRLALGKVGQTVKQYTMNPKAMP-----RTQLLGQIDIDTREWSDGV 2024 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 + AAR V++ L ++CD +++SL + Sbjct: 2025 LTKAAR-----EVVKEPLEVQSWIICD-------------GDIDPEWVESLNSV 2060 >gi|196231600|ref|ZP_03130458.1| protein of unknown function DUF344 [Chthoniobacter flavus Ellin428] gi|196224453|gb|EDY18965.1| protein of unknown function DUF344 [Chthoniobacter flavus Ellin428] Length = 252 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 18/41 (43%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 + L + FEG + AGK I L L + VH +P Sbjct: 51 HRSLIVVFEGPDAAGKGGAIKRLAERLDPRLLRVHSVIKPT 91 >gi|251798563|ref|YP_003013294.1| hypothetical protein Pjdr2_4593 [Paenibacillus sp. JDR-2] gi|247546189|gb|ACT03208.1| hypothetical protein Pjdr2_4593 [Paenibacillus sp. JDR-2] Length = 103 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 ++ + +GI G+GKTT + L +L V E Sbjct: 12 STKRLLIIDGIPGSGKTTTATRLHNYLTALGVRVKCLLE 50 >gi|89895475|ref|YP_518962.1| hypothetical protein DSY2729 [Desulfitobacterium hafniense Y51] gi|119371215|sp|Q24TX4|KGUA_DESHY RecName: Full=Guanylate kinase; AltName: Full=GMP kinase gi|89334923|dbj|BAE84518.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 200 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41 N GL I G GAGK T L R L + Y V TR+P Sbjct: 4 NHGLLIVLSGPSGAGKGTLCQELLRQLPQVKYSVSATTRQP 44 >gi|16080113|ref|NP_390939.1| ABC transporter ATP-binding protein [Bacillus subtilis subsp. subtilis str. 168] gi|221311000|ref|ZP_03592847.1| hypothetical protein Bsubs1_16656 [Bacillus subtilis subsp. subtilis str. 168] gi|221315326|ref|ZP_03597131.1| hypothetical protein BsubsN3_16567 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320243|ref|ZP_03601537.1| hypothetical protein BsubsJ_16488 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324526|ref|ZP_03605820.1| hypothetical protein BsubsS_16632 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312597|ref|YP_004204884.1| putative ABC transporter ATP-binding protein [Bacillus subtilis BSn5] gi|81815677|sp|O34314|YTLC_BACSU RecName: Full=Uncharacterized ABC transporter ATP-binding protein YtlC gi|2293296|gb|AAC00374.1| putative transporter [Bacillus subtilis] gi|2635545|emb|CAB15039.1| putative ABC transporter component, ATP-binding [Bacillus subtilis subsp. subtilis str. 168] gi|291485498|dbj|BAI86573.1| hypothetical protein BSNT_04454 [Bacillus subtilis subsp. natto BEST195] gi|320018871|gb|ADV93857.1| putative ABC transporter component, ATP-binding protein [Bacillus subtilis BSn5] Length = 260 Score = 38.1 bits (88), Expect = 0.82, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPG 42 G FISF G G GKTT +S++ ++ + + REP Sbjct: 32 KGDFISFLGPSGCGKTTLLSIIAGLIEPSEGRVLIEGREPN 72 >gi|327310790|ref|YP_004337687.1| ABC transporter-like protein [Thermoproteus uzoniensis 768-20] gi|326947269|gb|AEA12375.1| ABC transporter related protein [Thermoproteus uzoniensis 768-20] Length = 252 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 46/148 (31%), Gaps = 32/148 (21%) Query: 11 GIEGAGKTTHISLL---------KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G G+GKTT I+++ + DV +T P AE V + Sbjct: 34 GPNGSGKTTLINVVTGVYKPEAGRVVFHDDGRDVDITGWPPHKVFAEGIVRTFQIPQVFQ 93 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKIL---------------------LCDRFLD 100 E ++ A R V + A+ EG + + DR+ Sbjct: 94 RMTVIENLLVVA-RGQ-VGEDVLKAVREGAWIRQERELAERAFKILDMVGLGDVWDRYAY 151 Query: 101 SSYAYQGERDSSQHLFLDSLQEISVQEV 128 S A Q + + + I + E Sbjct: 152 SLSAGQMKLLELARALMAGAKLIILDEP 179 >gi|320326373|gb|EFW82426.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. glycinea str. B076] Length = 498 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ V + G T A A + + + A+ Sbjct: 299 GVNGAGKTTTIGKLAKKLQLGGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 354 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 355 TGADSASVIFDAVQAAKARGIDVLIAD 381 >gi|238913377|ref|ZP_04657214.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 512 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|222624888|gb|EEE59020.1| hypothetical protein OsJ_10764 [Oryza sativa Japonica Group] Length = 248 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 12/99 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64 G G+GK+T+ S L + + +H+ E P + R ++ L ++E G Sbjct: 9 GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + ++H+E+ + L E D +LD Y Sbjct: 69 GPNGGLIYC--MEHLEDNLDDWLDEQ----LDGYLDDDY 101 >gi|218192785|gb|EEC75212.1| hypothetical protein OsI_11476 [Oryza sativa Indica Group] Length = 237 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 12/99 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64 G G+GK+T+ S L + + +H+ E P + R ++ L ++E G Sbjct: 9 GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + ++H+E+ + L E D +LD Y Sbjct: 69 GPNGGLIYC--MEHLEDNLDDWLDEQ----LDGYLDDDY 101 >gi|218904316|ref|YP_002452150.1| phosphoribulokinase/uridine kinase [Bacillus cereus AH820] gi|218534874|gb|ACK87272.1| phosphoribulokinase/uridine kinase [Bacillus cereus AH820] Length = 218 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 21/193 (10%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGVDE 61 I GI G AGKTT + L L + + T +++ +H ++ + Sbjct: 19 IVI-GISGHGAAGKTTFANRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 75 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + A AA L +E I+ + G D + ++ Y + S + ++ Sbjct: 76 HRYKMTACHPAAHHLAALERDIQ-MVRAG----LDFYTIDTH-YMKSKLISSKNKVTIVE 129 Query: 122 EISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 +S + P D I + L R R A ++Y + HE+RR + Sbjct: 130 GMSAAFINPDLFDLKIYFYTDSETELMRRSIRDIDERGADINYLRQS----HEERRIQYE 185 Query: 179 DIARNQPDRCHIV 191 + R I+ Sbjct: 186 VFMHSYSQRFDII 198 >gi|27904538|ref|NP_777664.1| FtsY protei [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|31340085|sp|Q89B28|FTSY_BUCBP RecName: Full=Cell division protein ftsY homolog gi|27903935|gb|AAO26769.1| FtsY protei [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 397 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G+ G GKTT I L + ++K V + G T A A + L ++ Sbjct: 198 GVNGVGKTTLIGKLAKNYKKKGKSVILAA--GDTFRAAAIDQLKLWGEINSVSVIT 251 >gi|71400048|ref|XP_802935.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70865352|gb|EAN81489.1| hypothetical protein Tc00.1047053503731.9 [Trypanosoma cruzi] Length = 763 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G +GKT+ +S L+R ++ N++V E + +++LS + + Sbjct: 365 VVITGGPCSGKTSCLSYLRRVFEKLNFNVFCVPEVATLLHSGGV-NLILSTSEERITQQR 423 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + D + ++L DR AY Sbjct: 424 VILQMMMMLEDAFYELAS-MRSRPSLILYDRGTMDGSAY 461 >gi|186684491|ref|YP_001867687.1| adenylate kinase [Nostoc punctiforme PCC 73102] gi|186466943|gb|ACC82744.1| adenylate kinase [Nostoc punctiforme PCC 73102] Length = 183 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 68/210 (32%), Gaps = 43/210 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G GAGK T L L N T E R + A+ Sbjct: 6 FLGPPGAGKGTQAQSLAGHL---NIPHIST--------GEILRQAMKEQTHLGIKAQNYV 54 Query: 69 IVFAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 V+++++ L E +L D F R +Q FL+ L E Sbjct: 55 NSGELVPDQLVQDLVQERLNQPDAENGWIL-DGF---------PRKVTQAAFLEELLETI 104 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180 Q + LD P D+ ++R+ R ++ + +R +++ + Sbjct: 105 HQSGE--RVVNLDAPDDVVVERLLARGRKDDTEEVIR----------RRLEVYRAETAPL 152 Query: 181 ARNQPDR--CHIVDSAHSFQSVATNILNIV 208 DR V+ S + V T + ++ Sbjct: 153 IDYYRDRQKLLTVNGNQSQEEVTTELQKVI 182 >gi|325922161|ref|ZP_08183950.1| Adenylate kinase [Xanthomonas gardneri ATCC 19865] gi|325547363|gb|EGD18428.1| Adenylate kinase [Xanthomonas gardneri ATCC 19865] Length = 187 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 69/208 (33%), Gaps = 33/208 (15%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK T + LK T E + R + + A+ Sbjct: 4 VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 AR D V + I ++E ++ D + + G + ++L E+ + Sbjct: 52 ----VMARGDLVSDEILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALDELLGKI 103 Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182 P D + LD+ ++ ++R+ R E D E KR Q++ D Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157 Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208 Q + VD S V I + Sbjct: 158 FYEQRGKLARVDGVGSLDEVLERISKAL 185 >gi|323466933|gb|ADX70620.1| Excision endonuclease subunit UvrA [Lactobacillus helveticus H10] Length = 975 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 657 GKFIVVSGVSGSGKSTLVNMILKRVLAQK 685 >gi|319900414|ref|YP_004160142.1| shikimate kinase [Bacteroides helcogenes P 36-108] gi|319415445|gb|ADV42556.1| shikimate kinase [Bacteroides helcogenes P 36-108] Length = 175 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 64/202 (31%), Gaps = 47/202 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT R L N ++ R + + G D F ++ Sbjct: 11 GAGKTTLGKAFAREL---NIPFIDLDWYIEERFHKSIRELFMERGEDSFRELERNMLHEV 67 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 A ++V ++ F D+++ ++ T Sbjct: 68 AEFENV-------------VIST-------------GGGTPCFFDNMKRMNEYG----YT 97 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP----DRCH 189 + LD+ D+ +R++ R + D +H + +A+ P R H Sbjct: 98 VFLDVHPDVLFRRLRIATQQRPVLQG----KTDEELHAFIVE---TLAKRAPFYEQARYH 150 Query: 190 IVDSAHSFQSVATNILNIVWEL 211 D +H +S I V +L Sbjct: 151 F-DGSH-LES-HQQITESVQQL 169 >gi|298493051|ref|YP_003723228.1| guanylate kinase ['Nostoc azollae' 0708] gi|298234969|gb|ADI66105.1| guanylate kinase ['Nostoc azollae' 0708] Length = 198 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 1/67 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEF 62 G I G G GK T + L + Y V TR P + + ++ Sbjct: 19 GKLIVLTGPSGVGKGTLMQKLLQRHPELYYSVSVTTRSPRTGEVNGKNYYFISCSKFEQL 78 Query: 63 GAEAEAI 69 A+ E + Sbjct: 79 VAQGEFL 85 >gi|257876535|ref|ZP_05656188.1| ABC transporter [Enterococcus casseliflavus EC20] gi|257810701|gb|EEV39521.1| ABC transporter [Enterococcus casseliflavus EC20] Length = 268 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 17/25 (68%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 MN+G FI+ G GAGK+T ++ + Sbjct: 32 MNTGDFITIIGGNGAGKSTLLNSIA 56 >gi|253581645|ref|ZP_04858869.1| guanylate kinase [Fusobacterium varium ATCC 27725] gi|251835994|gb|EES64531.1| guanylate kinase [Fusobacterium varium ATCC 27725] Length = 185 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 18/41 (43%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 M G G GAGK+T L+++ L TREP Sbjct: 1 MPKGNLYVVSGPSGAGKSTICRLVRKMLGINLATSATTREP 41 >gi|256371798|ref|YP_003109622.1| dephospho-CoA kinase [Acidimicrobium ferrooxidans DSM 10331] gi|256008382|gb|ACU53949.1| dephospho-CoA kinase [Acidimicrobium ferrooxidans DSM 10331] Length = 204 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 33/213 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G G+GK+T + L D P +E ++ + G D E Sbjct: 5 IVVCGPTGSGKSTLRARLVER-GAVGIDADEVARAVVEPGSEVLASLVAAFGDDICDNEG 63 Query: 67 EAIV-FAAARL-------DHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 AAR + + PA+ +++ A D + Sbjct: 64 RLRRDVLAARAFGSAETTALLGRLTHPAIRAE--------IEAQLA--SAGDGDVVVVEV 113 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 L + + PD + + + RV + E+ R +R + L Sbjct: 114 PLWRRADDWICPDLVVWVGASAERAGARVAEEGRMSEAELRQR--RARFDFEAQRHEADL 171 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++D+ +++A + VW L Sbjct: 172 -----------VIDNDGGPEALAKA-ADRVWSL 192 >gi|225712688|gb|ACO12190.1| Guanylate kinase [Lepeophtheirus salmonis] Length = 199 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 16/162 (9%) Query: 11 GIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G G+GK+T I L F + V H TR P +A H + + + ++ E Sbjct: 13 GPSGSGKSTLIKKLTAEFPTAFGFSVSHTTRSPRPGEVHGSAYHFVTRKVMKDMLSKGE- 71 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 + A ++ A+ ++ D DS + + ++ + + Sbjct: 72 FIENAEFSGNMYGTSFAAVES---VVSD---DSKICI----LDIDAQGVRQV-KVKEEFL 120 Query: 129 MPDCTIILDLPV-DIGLKRVQNRYSLRESACLDYFERKDVMI 169 P + +++P ++ +R+++R + E + I Sbjct: 121 QP-LYVFINIPSMEVLEERLKSRNTETEESLARRMSAAKAEI 161 >gi|219123108|ref|XP_002181873.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406474|gb|EEC46413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 308 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 23/134 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ GI G GK+T ++ L + ++ + G T + A + + + + Sbjct: 111 IAVVGINGVGKSTSLAKLAYYFKQNGCSPLLVA--GDTFRSGAVEQLKVHASCLDIPMYS 168 Query: 67 EAI-----VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + + A A + H ++L D R + + +L Sbjct: 169 QGYSKDPSIVAKAAIQHATE------ENHDVVLID---------TAGRMQNNVPLMKALG 213 Query: 122 EISVQEVMPDCTII 135 ++ + PD I+ Sbjct: 214 KLVTEN-KPDFVIL 226 >gi|158298344|ref|XP_318518.4| AGAP010790-PA [Anopheles gambiae str. PEST] gi|157014356|gb|EAA13735.5| AGAP010790-PA [Anopheles gambiae str. PEST] Length = 4002 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 32/111 (28%), Gaps = 26/111 (23%) Query: 15 AGKTTHISLLKRFLQRKN--YDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 +GKTT I+LLK L + +H + R L ++ + Sbjct: 1891 SGKTTIIALLKEALIAQGQIIRIHTISPKSMSRVQLLGR---LDPDTRQWTDGVLTSMAV 1947 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A + ++CD ++++L + Sbjct: 1948 AVNAESRNVT--------SWIICD-------------GDVDPEWIEALNSV 1977 >gi|121720030|ref|XP_001276713.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1] gi|119404925|gb|EAW15287.1| ABC multidrug transporter, putative [Aspergillus clavatus NRRL 1] Length = 1288 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPA 46 + SG F++F G G GK+T ISLL+RF + H T E GG Sbjct: 1059 IQSGQFVAFVGPSGCGKSTLISLLERFYE----PTHGTVEVGGQDI 1100 >gi|152996778|ref|YP_001341613.1| ABC transporter-like protein [Marinomonas sp. MWYL1] gi|150837702|gb|ABR71678.1| ABC transporter related [Marinomonas sp. MWYL1] Length = 373 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 33/93 (35%), Gaps = 10/93 (10%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK--------RFLQRKNYDVHVTREPGGTPAAEAARH 52 +N G FI F G G GK+T + +L L V EP A + Sbjct: 27 INDGEFIVFLGPSGCGKSTTLRMLAGLEDISGGEILINN--KVVNELEPIERDIAMVFQS 84 Query: 53 VLLSCGVDEFGAEAEAIVFAAARLDHVENVIRP 85 L + + A A+ A ++ +RP Sbjct: 85 YALYPHMSVYQNIAFALKLAGMSKAEIDEKVRP 117 >gi|58616546|ref|YP_195676.1| transposion helper protein, ATP-binding protein [Azoarcus sp. EbN1] gi|56316009|emb|CAI10652.1| transposion helper protein, ATP-binding protein [Aromatoleum aromaticum EbN1] Length = 255 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GKT I+ L L + Y V TR +AAR L + ++ Sbjct: 100 GPPGVGKTHLIAGLGHALVERGYRVLFTRTSDLVQRLQAARRDLRLPAELARLDRFDLLI 159 Query: 71 ---FAAARLDHVENVIRPALMEGKILLCDRFLDSSYA 104 F+ R D E + L + +R+ S A Sbjct: 160 CDDFSYVRRDQGETSVLFEL------IAERYERKSLA 190 >gi|134299556|ref|YP_001113052.1| guanylate kinase [Desulfotomaculum reducens MI-1] gi|134052256|gb|ABO50227.1| guanylate kinase [Desulfotomaculum reducens MI-1] Length = 200 Score = 38.1 bits (88), Expect = 0.83, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 29/170 (17%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M GL I G GAGK T L + + V TR + Sbjct: 1 MTRQGLLIVISGPSGAGKGTICQGLLKKNKDLCLSVSCTTRPVRPGEVDGVNYFFVSKEA 60 Query: 59 VDEFGAEAEAIVFAAARLDHVE----NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 ++ +E E ++ A D+ N + L G+ ++ + +D A Q ++ + Sbjct: 61 FEKMISENE-LLEYARVYDNYYGTPLNFVEEKLSTGQDVILE--IDIQGALQIKQKYPKG 117 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGL--KRVQNRYSLRESACLDYF 162 +I +P + L +R+ R + + Sbjct: 118 ------------------VLIFVVPPSLSLLQERLTKRGTDSAESINKRL 149 >gi|326918532|ref|XP_003205542.1| PREDICTED: bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1-like isoform 2 [Meleagris gallopavo] Length = 608 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 38 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 83 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ + I +P Sbjct: 84 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 131 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 132 FFEVFVDAPLHVCEQR 147 >gi|315641781|ref|ZP_07896785.1| deoxynucleoside kinase [Enterococcus italicus DSM 15952] gi|315482456|gb|EFU72995.1| deoxynucleoside kinase [Enterococcus italicus DSM 15952] Length = 212 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 63/202 (31%), Gaps = 40/202 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I G GAGK++ ++L L Y+ E AE + Sbjct: 2 IVLAGTIGAGKSSLTAMLSHHLGSVAFYESVEDNEVLPLFYAE---------------PQ 46 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDSS---------QH 114 A + L+ + I+ AL +L DR + DS + Sbjct: 47 KYAFLLQIYFLNKRFDSIKRALSHPDNVL-DRSIYEDSLLFHLNADLGRATKTEVKVYDE 105 Query: 115 LFLDSLQEI--SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 L + L+E+ Q+ PD + + + D L+R+ R E D Sbjct: 106 LLANMLEELPDVSQKKHPDLLVHIRISFDTMLERIAKRGRPYEQIAHDP----------S 155 Query: 173 RRQIFLDIARNQPDRCHIVDSA 194 + ++ + D++ Sbjct: 156 LYDYYQELNKRYDQWYDAYDAS 177 >gi|317056352|ref|YP_004104819.1| dethiobiotin synthase [Ruminococcus albus 7] gi|315448621|gb|ADU22185.1| dethiobiotin synthase [Ruminococcus albus 7] Length = 232 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 26/131 (19%), Positives = 44/131 (33%), Gaps = 32/131 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL------ 54 MN GLFI+ G + GKT +LL + L YD + + ++ Sbjct: 1 MNKGLFITGTGTD-IGKTYVTALLVKKLHDSGYDTAYFKAAVSGNRRDDMGRLIPGDAAY 59 Query: 55 ------LSCGVDEFGA---EAEAIVFAAARLD-------HVENVIRPALMEGKILLCD-- 96 +S +D EA A+R + V+ + K ++C+ Sbjct: 60 VKEISGISQPIDSMCPYVYEAAVSPHLASRTEGSPVEIATVKTQYEKLCKKYKYVICEGS 119 Query: 97 -------RFLD 100 R+ D Sbjct: 120 GGIVCPIRYDD 130 >gi|255642045|gb|ACU21289.1| unknown [Glycine max] Length = 284 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 70/238 (29%), Gaps = 51/238 (21%) Query: 9 FEGIEGAGKTTHISLLKRFL----QRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G +GK T L+ D+ G+ + A+ + + Sbjct: 70 ISGAPASGKGTQCHLITNKYGLVHIAAG-DLLRAEIATGSDNGKRAKQYM---EKGQLVP 125 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + ++ RL ++P E L D + R SQ L++L Sbjct: 126 DEIVVMMVKERL------LKPDSKENGW-LLDGY---------PRSLSQATALEAL---- 165 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFERKDVMIH 170 P ++L++ D+ ++RV R ++ Sbjct: 166 --GFRPHIFLLLEVSEDVLVERVVGRRLDPVTGKIYHLKYSPPETQEIAARLTQRFDDTE 223 Query: 171 EKR-------RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 EK Q + D ++ S + V I + + L+++R + S Sbjct: 224 EKVKLRLNTHHQNVESVLSMYKDITVKINGNVSKEEVFAQIDSALTSLIEERKAASGS 281 >gi|229191091|ref|ZP_04318081.1| hypothetical protein bcere0002_27550 [Bacillus cereus ATCC 10876] gi|228592489|gb|EEK50318.1| hypothetical protein bcere0002_27550 [Bacillus cereus ATCC 10876] Length = 282 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAKLINEILIQNKIEVELFLE 39 >gi|222149582|ref|YP_002550539.1| adenylate sulfate kinase protein [Agrobacterium vitis S4] gi|221736564|gb|ACM37527.1| adenylate sulfate kinase protein [Agrobacterium vitis S4] Length = 209 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L+ L + Y + +L G + Sbjct: 44 GLSGSGKSTVANALESQLHGQGYHTY-----------------ILDGDNVRHGLNRDLGF 86 Query: 71 FAAARLD---HVENVIRPALMEGKILL 94 A R++ V V + G I++ Sbjct: 87 SDADRVENIRRVAEVAKLMADAGLIVI 113 >gi|254391557|ref|ZP_05006757.1| dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064] gi|294812019|ref|ZP_06770662.1| Dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064] gi|197705244|gb|EDY51056.1| dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064] gi|294324618|gb|EFG06261.1| Dephospho-CoA kinase [Streptomyces clavuligerus ATCC 27064] Length = 199 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 14/91 (15%) Query: 126 QEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + P D I++D + L+R+ + ES + R+ IA Sbjct: 118 NGLAPRYDLVIVVDAAPETQLERLVELRGMDESEARARMAA------QATREQRRAIAD- 170 Query: 184 QPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 ++D+ S + +A + ++ EL ++ Sbjct: 171 -----VVIDNDGSREQLAAQVESVWAELARR 196 >gi|170741579|ref|YP_001770234.1| signal recognition particle-docking protein FtsY [Methylobacterium sp. 4-46] gi|168195853|gb|ACA17800.1| signal recognition particle-docking protein FtsY [Methylobacterium sp. 4-46] Length = 473 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 18/136 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + + + V + G T A A L + GA + Sbjct: 274 GVNGAGKTTTIGKLAQKFRAQGRSVMLAA--GDTFRAAAIEQ--LKVWGERTGAPVLSRP 329 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS-----V 125 A + ++ A G +L +D+ R ++ + L++I + Sbjct: 330 QGADAAGLAFDALQAAREAGTDVLM---IDT-----AGRLQNKAGLMAELEKIVRVIRKL 381 Query: 126 QEVMPDCTII-LDLPV 140 E P ++ LD V Sbjct: 382 DETAPHAVLLVLDATV 397 >gi|169623702|ref|XP_001805258.1| hypothetical protein SNOG_15094 [Phaeosphaeria nodorum SN15] gi|160705032|gb|EAT77637.2| hypothetical protein SNOG_15094 [Phaeosphaeria nodorum SN15] Length = 1295 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 17/25 (68%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF 27 G FI+ G G GK+T I++L+RF Sbjct: 1071 KGKFIALVGASGCGKSTIIAMLERF 1095 >gi|149191502|ref|ZP_01869751.1| cell division protein FtsY [Vibrio shilonii AK1] gi|148834690|gb|EDL51678.1| cell division protein FtsY [Vibrio shilonii AK1] Length = 414 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + ++ A+ Sbjct: 217 GVNGVGKTTTIGKLAKQYQAQGKKVMLAA--GDTFRAAAVEQLQVWGERNDVPVIAQH-- 272 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A G +++ D Sbjct: 273 TGADSASVIYDAIEAAKARGVDVVIAD 299 >gi|148270481|ref|YP_001244941.1| cytidylate kinase [Thermotoga petrophila RKU-1] gi|166199011|sp|A5IME2|KCY_THEP1 RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|147736025|gb|ABQ47365.1| cytidylate kinase [Thermotoga petrophila RKU-1] Length = 220 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 58/240 (24%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD--------VHVTREPGGTPAA--EAARHVLLS 56 I+ +G +GK+T LL L + + E G +P + + + L Sbjct: 5 IAIDGPAASGKSTVARLLAEKLGFDHLNTGATYRSVAVYLHERGFSPFSAEKEIENALKD 64 Query: 57 CGVDEF----------------GAEAEAIVFAAARLD----HVENVIRPALMEGKILLCD 96 +D EA + ARL+ H+ + R + I++ Sbjct: 65 LKIDYVNGRVYINGEDYTEKIQSPEAGVLASNFARLEVVRRHLVRIQREICDDKNIVV-- 122 Query: 97 RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE- 155 E + L + I L ++ ++R Y R Sbjct: 123 -----------EGRDIGTVVLPNAH----------LKIFLTASLEARVERKLKEYQKRGL 161 Query: 156 SACLDYFERKDVMIHEKRRQIFLDIARNQP-DRCHIVDS-AHSFQSVATNILNIVWELVQ 213 + ER+ + E+ + ++A +P + I+D+ + S + V IL +V E + Sbjct: 162 KVTKEEVERELISRDEQDSK--RNVAPLKPAEDAVIIDTTSMSVEEVLDRILKLVRERMN 219 >gi|76803087|ref|YP_331182.1| cytidylate kinase [Natronomonas pharaonis DSM 2160] gi|121695362|sp|Q3IMV8|KCY_NATPD RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|76558952|emb|CAI50548.1| cytidylate kinase [Natronomonas pharaonis DSM 2160] Length = 192 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 54/175 (30%), Gaps = 38/175 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD--EF 62 + I+ G G+GK+T + L L Y+ + R + G+ E Sbjct: 1 MLITISGPAGSGKSTVAAGLAESL---GYEHV--------SGGDIFRDLADDRGLTPLEL 49 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 AE LD + I A I+L +S A + + Sbjct: 50 NKRAEEDDQIDRDLDRKQRDI--AESRDDIVL-----ESRLAGWMAGEHADFR------- 95 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 I LD P+ + +R+ +R + + + + R+ + Sbjct: 96 -----------IWLDAPLSVRAERIADREDKSVELAHNETKERGKSEALRYREYY 139 >gi|109897971|ref|YP_661226.1| adenylylsulfate kinase [Pseudoalteromonas atlantica T6c] gi|109700252|gb|ABG40172.1| adenylylsulfate kinase [Pseudoalteromonas atlantica T6c] Length = 198 Score = 38.1 bits (88), Expect = 0.84, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T +LL++ L + LL G + Sbjct: 32 GLSGSGKSTIANLLEKKLADNGKHTY-----------------LLDGDNVRHGLNGDLTF 74 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 R++++ + + + G I++ Sbjct: 75 SDKDRVENIRRISELSKLFVDSGLIVIT 102 >gi|322823439|gb|EFZ29192.1| hypothetical protein TCSYLVIO_4560 [Trypanosoma cruzi] Length = 2811 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 22/62 (35%), Gaps = 4/62 (6%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTRE-PGGTPAAEAARHVLLSCGVDEFG 63 + G +GKTT I L L + + D V E T E R + LS + Sbjct: 61 VVITGPPFSGKTTQIRRLVEKLNVSQLDLDAMVRAEAEFDTAEGELIRTI-LSEREENRT 119 Query: 64 AE 65 Sbjct: 120 PR 121 >gi|325110886|ref|YP_004271954.1| guanylate kinase [Planctomyces brasiliensis DSM 5305] gi|324971154|gb|ADY61932.1| guanylate kinase [Planctomyces brasiliensis DSM 5305] Length = 209 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 23/175 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVH--VTREPGGTPAAEAARHVLLSCGVDEFGA 64 + G G+GKTT +S L+ TR P + L ++ A Sbjct: 21 VVLSGPSGSGKTTIVSRLEAESPVPLVKSVSATTRAPRKHEVDGQDYYFLAPEEFEQRRA 80 Query: 65 EAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E + +A R ++ L DR A + + + ++ Q + Sbjct: 81 RGEFLEYAEVFRTGCWYGTLKSEL--------DR------ARKQSAWALLEIDVEGAQNV 126 Query: 124 SVQEVMPD-CTIILDLP-VDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRR 174 Q PD TI L P VD +R++ R + E E R+++ + + Sbjct: 127 MQQ--YPDALTIFLTTPSVDEFERRLRARGTEEEHVIQRRLETARRELEFANRYQ 179 >gi|302348565|ref|YP_003816203.1| ATPase, PilT family [Acidilobus saccharovorans 345-15] gi|302328977|gb|ADL19172.1| ATPase, PilT family [Acidilobus saccharovorans 345-15] Length = 496 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 4/69 (5%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G+ I+ G GAGKTT L F + V P + + S + Sbjct: 246 GILIA--GSPGAGKTTFAQALAEFYASRGKVVKTIESPRDMRLSPSITQY--SKNYADMT 301 Query: 64 AEAEAIVFA 72 + ++ + Sbjct: 302 ELHDILLLS 310 >gi|295399782|ref|ZP_06809763.1| signal recognition particle-docking protein FtsY [Geobacillus thermoglucosidasius C56-YS93] gi|294978185|gb|EFG53782.1| signal recognition particle-docking protein FtsY [Geobacillus thermoglucosidasius C56-YS93] Length = 330 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GKTT I L L+ + V + G T A A L + GAE Sbjct: 123 ILFVGVNGVGKTTTIGKLAHKLKSEGKTVMLAA--GDTFRAGAIEQ--LEVWGERVGAEV 178 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCD 96 + + + I+ A G +LLCD Sbjct: 179 IKQTAGSDPAAVIYDAIQAAKARGADVLLCD 209 >gi|224534592|ref|ZP_03675168.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia spielmanii A14S] gi|224514269|gb|EEF84587.1| spermidine/putrescine ABC transporter, ATP-binding protein [Borrelia spielmanii A14S] Length = 347 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 19/32 (59%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 FI+ G G GKTT I +L FL +K +++ Sbjct: 35 FITLLGPSGCGKTTLIKILGGFLSQKTGEIYF 66 >gi|218437648|ref|YP_002375977.1| excinuclease ABC subunit A [Cyanothece sp. PCC 7424] gi|218170376|gb|ACK69109.1| excinuclease ABC, A subunit [Cyanothece sp. PCC 7424] Length = 1002 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 4 GLFISFEGIEGAGKTTHI-SLLKRFLQRK-NYDVHVTREPGGTPAAEAARHVL 54 G +S G+ G+GK+T I LL LQ + V ++ G EA V+ Sbjct: 687 GKLVSITGVSGSGKSTLINELLYPALQHHLSRHVPFPKQLGAIKGLEAIDKVI 739 >gi|161504017|ref|YP_001571129.1| hypothetical protein SARI_02110 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160865364|gb|ABX21987.1| hypothetical protein SARI_02110 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 578 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|115386444|ref|XP_001209763.1| hypothetical protein ATEG_07077 [Aspergillus terreus NIH2624] gi|114190761|gb|EAU32461.1| hypothetical protein ATEG_07077 [Aspergillus terreus NIH2624] Length = 645 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 21/137 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65 IS G+ G GK+T++ + FL + NY V + T + A + + E A Sbjct: 438 ISIVGVNGVGKSTNLGKICYFLLQNNYRVLIAA--CDTFRSGAVEQLRVHARNLKELSAR 495 Query: 66 A---EAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFL 117 E ++ NV + A+ G ++L D R + + Sbjct: 496 ENVGEVELYEKGYGKDAANVAKDAVEYGAANKFDVVLID---------TAGRRHNDQRLM 546 Query: 118 DSLQEISVQEVMPDCTI 134 SL++ + PD Sbjct: 547 SSLEKFAKFA-KPDKIF 562 >gi|94991925|ref|YP_600024.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS2096] gi|94545433|gb|ABF35480.1| Dephospho-CoA kinase [Streptococcus pyogenes MGAS2096] Length = 206 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 31/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52 + I G +GK+T + ++ ++ Y V + G EA R Sbjct: 7 KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 62 Query: 53 --VLLSCGVDEFGAEAEAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQ 106 +L + G + +E + A +I+ L + + Sbjct: 63 NQILKADGELDRTKLSEMLFSNPNNMATSSAIQNQIIKEELAAKRD------------HL 110 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + + + + L E+ Q+ D ++ + L+R+ R L + + Sbjct: 111 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 168 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L I +P ++D+ +++ + + + L R Sbjct: 169 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 206 >gi|25144563|ref|NP_741216.1| NADH Ubiquinone Oxidoreductase family member (nuo-4) [Caenorhabditis elegans] gi|21450539|gb|AAM54175.1|U21320_6 Hypothetical protein K04G7.4b [Caenorhabditis elegans] Length = 188 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 11/24 (45%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL 28 I EG G+GKTT L L Sbjct: 73 KLIVVEGNIGSGKTTLAKQLADQL 96 >gi|219669911|ref|YP_002460346.1| guanylate kinase [Desulfitobacterium hafniense DCB-2] gi|219540171|gb|ACL21910.1| Guanylate kinase [Desulfitobacterium hafniense DCB-2] Length = 200 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP 41 N GL I G GAGK T L R L + Y V TR+P Sbjct: 4 NHGLLIVLSGPSGAGKGTLCQELLRQLPQVKYSVSATTRQP 44 >gi|307555080|gb|ADN47855.1| hypothetical ATP-binding protein YghS [Escherichia coli ABU 83972] Length = 232 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 66/246 (26%), Gaps = 66/246 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELAATMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF--------- 98 + G +++ + R ++ + +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNMTALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRYPQVEVPGFR 130 Query: 99 LDSSYAYQGERDSSQHLFLDSLQEISVQ------EVMPDCTIILDLPVDIGLKRVQNRYS 152 D Q + + + ++ L++ ++ +P I L + R Sbjct: 131 FDGP---QLAKTTGGNGWIKMLRQRELKLYQWMASYLPVLLIRLGIDEQTAFAR------ 181 Query: 153 LRESACLDYFERKDVMIHEKRRQIFLDIARNQPD------RCHIVDSAHSFQSVATNILN 206 + + + EK P R +D + L Sbjct: 182 --------KPDHQLAALQEKI--------AVTPQLTFNGARILELDGRQPADEILQASLR 225 Query: 207 IVWELV 212 + + Sbjct: 226 AIQAAL 231 >gi|303232269|ref|ZP_07318968.1| cytidylate kinase [Atopobium vaginae PB189-T1-4] gi|302481679|gb|EFL44740.1| cytidylate kinase [Atopobium vaginae PB189-T1-4] Length = 520 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 14/24 (58%) Query: 5 LFISFEGIEGAGKTTHISLLKRFL 28 + I+ +G G+GK+T + R L Sbjct: 1 MIIAIDGPSGSGKSTVARSIARRL 24 >gi|260655822|ref|ZP_05861291.1| ferrichrome transport ATP-binding protein FhuC [Jonquetella anthropi E3_33 E1] gi|260629438|gb|EEX47632.1| ferrichrome transport ATP-binding protein FhuC [Jonquetella anthropi E3_33 E1] Length = 250 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ 29 G FIS GI GAGK+T + L + L+ Sbjct: 27 RGTFISILGINGAGKSTLLKNLNKTLR 53 >gi|238749497|ref|ZP_04611002.1| LAO/AO transport system kinase [Yersinia rohdei ATCC 43380] gi|238712152|gb|EEQ04365.1| LAO/AO transport system kinase [Yersinia rohdei ATCC 43380] Length = 318 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAARHVLLSCGVD 60 I+ G GAGK+T +++L L + + V + +P GG+ + R + LS Sbjct: 46 IT--GTPGAGKSTFLAVLGEELLSQGHKVAVIAIDPSSPVSGGSILGDKTRMLNLSRADH 103 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGK-ILL 94 F + +I G I++ Sbjct: 104 AFVRPVPSRGHLGGASQRTRELILLCEAAGYDIVI 138 >gi|237799965|ref|ZP_04588426.1| hypothetical protein POR16_14105 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022820|gb|EGI02877.1| hypothetical protein POR16_14105 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 161 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 27/155 (17%), Positives = 48/155 (30%), Gaps = 31/155 (20%) Query: 15 AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA 74 +GK+T L + + E D+ + A+ I A Sbjct: 15 SGKSTLAKALSVE-----HSAILLSEDSWLSGLY----------PDDIKSVADYIRLARR 59 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTI 134 D + ++ L G ++ D F ++ A L+ ++ +P C Sbjct: 60 IRDVLGPLVVSILRSGVAVVLD-FPANTVA-----------DRKWLRSLADDAQVPHCLH 107 Query: 135 ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 LD+ D+ L R+ R E F D Sbjct: 108 YLDVDDDVCLARLHARNEKAEHD----FSATDAEF 138 >gi|257066792|ref|YP_003153048.1| signal recognition particle protein [Anaerococcus prevotii DSM 20548] gi|256798672|gb|ACV29327.1| signal recognition particle protein [Anaerococcus prevotii DSM 20548] Length = 445 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 51/135 (37%), Gaps = 15/135 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTTH L L+++N + +T PAA V+ E + + Sbjct: 108 GLQGSGKTTHSGKLALKLKKENRNPMLTALDIYRPAAIEQLKVVGKTAGVEVFDKDKQDP 167 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 AR E L +++ D R +D L+ I + V P Sbjct: 168 VKTAR----EAKDYARLNNHDVVILD---------TAGRLQIDTDLMDELKNI-KEAVNP 213 Query: 131 DCTIILDLPVDIGLK 145 D I+L + G + Sbjct: 214 D-EILLVVDAMTGQE 227 >gi|257052419|ref|YP_003130252.1| daunorubicin resistance ABC transporter ATPase subunit [Halorhabdus utahensis DSM 12940] gi|256691182|gb|ACV11519.1| daunorubicin resistance ABC transporter ATPase subunit [Halorhabdus utahensis DSM 12940] Length = 411 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 73/226 (32%), Gaps = 38/226 (16%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVLL 55 G F F G GAGKTT I +L L+ +DV R A+ + Sbjct: 68 QGEFFGFLGPNGAGKTTTIKVLATLLEPTSGTVEVNGFDVVRDRTAVRASIGYMAQETSI 127 Query: 56 SCGVDEFGAEAEAIVFAAAR----LDHVENVIRPALMEGKIL-LCDRFLDSSYAYQGERD 110 E A E ++FA D I L ++ L D + + A G Sbjct: 128 D---TELTAR-ENLMFACDAYGVPRDDRARRIADLLN---LVDLAD--VADTPA--GNFS 176 Query: 111 SSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIH 170 LD+ + PD LD GL Q R L E + Sbjct: 177 GGMKKRLDAATALVHD---PDLVF-LD-EPTTGLD-PQARNRLWEYFR--RINAGGTTVF 228 Query: 171 EKRRQIFLDIARNQPDRCHIV-D----SAHSFQSVATNILNIVWEL 211 + +L+ A + DR ++ D + + + + + EL Sbjct: 229 LTTQ--YLEEADHLCDRLAVIRDGRIVADGAPDELKRRVGGDILEL 272 >gi|225849324|ref|YP_002729488.1| dethiobiotin synthase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643194|gb|ACN98244.1| dethiobiotin synthase [Sulfurihydrogenibium azorense Az-Fu1] Length = 217 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 16/84 (19%) Query: 1 MNSGLFISFEGIE-GAGKTTHISLLKRFLQRKNYDVHVTR--EPGGTPA----------- 46 M + LFI+ + G GKTT + + + L+ K +V + E G P Sbjct: 1 MLNSLFIT--ATDTGVGKTTVSAAICKLLKEKGVNVAYFKPAETGCQPIPQDAYTISKIT 58 Query: 47 AEAARHVLLSCGVDEFGAEAEAIV 70 + V++ + ++ Sbjct: 59 GQPLEEVVIYTFENPVAPYTATVL 82 >gi|222147288|ref|YP_002548245.1| ABC transporter nucleotide binding/ATPase protein (sn-Glycerol-3-phosphate) [Agrobacterium vitis S4] gi|221734278|gb|ACM35241.1| ABC transporter nucleotide binding/ATPase protein (sn-Glycerol-3-phosphate) [Agrobacterium vitis S4] Length = 368 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 6/66 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK------RFLQRKNYDVHVTREPGGTPAAEAARHVL 54 +N G FI G G GK+T + ++ + R V T EP A ++ Sbjct: 27 INDGEFIVLVGPSGCGKSTLLRMVAGLESISEGVVRIGDRVVNTVEPADRDIAMVFQNYA 86 Query: 55 LSCGVD 60 L + Sbjct: 87 LYPHMT 92 >gi|88802667|ref|ZP_01118194.1| Deoxynucleoside kinase subfamily, putative [Polaribacter irgensii 23-P] gi|88781525|gb|EAR12703.1| Deoxynucleoside kinase subfamily, putative [Polaribacter irgensii 23-P] Length = 204 Score = 38.1 bits (88), Expect = 0.85, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 59/189 (31%), Gaps = 32/189 (16%) Query: 14 GAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFA 72 GAGKTT LL + + + +Y+ E AR + + Sbjct: 10 GAGKTTLTKLLAKHYKWKPHYESVDENPYLDDFYTEMAR----------WSFNLQVYFLN 59 Query: 73 AARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEISV 125 + I G ++ DR + D+ + G + + SL ++ Sbjct: 60 SRFRQ-----IVALRESGDNIIQDRTIYEDAHIFAPNLHAMGLMTNRDYSNYSSLFDLME 114 Query: 126 QEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 V PD I L + + ++ R E++ + + + + N Sbjct: 115 NLVRPPDLLIYLRADISTLVGQIHKRGREYENSI-------SIDYLSRLNERYEAWVSNY 167 Query: 185 -PDRCHIVD 192 + I+D Sbjct: 168 SKGKLLIID 176 >gi|332159431|ref|YP_004424710.1| adenylate kinase [Pyrococcus sp. NA2] gi|331034894|gb|AEC52706.1| adenylate kinase [Pyrococcus sp. NA2] Length = 220 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 67/226 (29%), Gaps = 50/226 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK+T + + + R + G E E + Sbjct: 7 GPPGSGKSTQARKITER-----------YGLTYISSGDIIRAEIK--ARTPIGIEMEHYL 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCD-RFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 +R D + + I +++ R + ++ G + + + + Sbjct: 54 ---SRGDLIPDTIV-----NTLIISKLRRVRENFIMDGYPRT-PEQVIALENYLYDHGIK 104 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE-------------------RKDV--M 168 D I + + + ++R+ R + + + E R+D Sbjct: 105 IDVAIDIFITKEESIRRISGRRICSKCGAVYHVEFNPPKIPGKCDICGGELVQREDDRPE 164 Query: 169 IHEKRRQIFLD----IAR--NQPDRCHIVDSAHSFQSVATNILNIV 208 I KR I++ I + + +D S V I ++ Sbjct: 165 IVGKRYDIYIKNMSPIIKFYQKQGIYVKIDGHGSINEVWERIRPLL 210 >gi|325267267|ref|ZP_08133929.1| cell division protein FtsY [Kingella denitrificans ATCC 33394] gi|324981204|gb|EGC16854.1| cell division protein FtsY [Kingella denitrificans ATCC 33394] Length = 521 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37 GI GAGKTT I L ++ Q++ V + Sbjct: 323 GINGAGKTTSIGKLAKYFQKQGKSVML 349 >gi|308173522|ref|YP_003920227.1| adenylylsulfate kinase [Bacillus amyloliquefaciens DSM 7] gi|307606386|emb|CBI42757.1| adenylylsulfate kinase [Bacillus amyloliquefaciens DSM 7] gi|328553545|gb|AEB24037.1| adenylyl-sulfate kinase [Bacillus amyloliquefaciens TA208] gi|328911663|gb|AEB63259.1| adenylylsulfate kinase [Bacillus amyloliquefaciens LL3] Length = 197 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 34/139 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + R L + Y V ++L G + Sbjct: 33 GLSGSGKSTIANAAARELFEQGYQV-----------------IVLDGDNIRHGLNKDLGF 75 Query: 71 FAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R +++ V + + +G I++ A+ + + + E E Sbjct: 76 SDDDRKENIRRIGEVAKLFVQQGTIVIT--------AFISPFREDRDQVRELVAEGEFNE 127 Query: 128 VMPDCTIILDLPVDIGLKR 146 I + +DI KR Sbjct: 128 ------IYVKCDLDICEKR 140 >gi|302871874|ref|YP_003840510.1| cytidylate kinase [Caldicellulosiruptor obsidiansis OB47] gi|302574733|gb|ADL42524.1| cytidylate kinase [Caldicellulosiruptor obsidiansis OB47] Length = 226 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 40/250 (16%), Positives = 77/250 (30%), Gaps = 69/250 (27%) Query: 7 ISFEGIEGAGKTTHISLLKRFL-----------QRKNYDVHVTREPGGTPAAEAARHVL- 54 I+ +G GAGK+T LL L + V + + +L Sbjct: 6 IAIDGPAGAGKSTISKLLASQLGYIHIDTGAMYRAVGLKVL--KNNISPHDSRKIVEILN 63 Query: 55 ----------------LSCGV-DEFGAEAEAIVFAAAR---LDHVENVIR--PALMEGKI 92 L E + E ++A+ + E +++ L + K Sbjct: 64 STDIKIKLVDGKQLVFLDGEDVTEEIRQPEVSMYASDVSKIREVRERLVKMQQDLAKQKG 123 Query: 93 LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR-----V 147 ++ D L + + I L + KR Sbjct: 124 VIMD------------GRDIGTHVLPNAE----------LKIFLTATAEERAKRRFLELK 161 Query: 148 QNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVDS-AHSFQSVATNILN 206 Q Y + LD +++D + L IA + ++DS + S + V IL Sbjct: 162 QKGYDVDYYQLLDEIKKRDQNDMTREFAP-LRIAEDA----IVIDSTSLSIEEVLQKILE 216 Query: 207 IVWELVQKRV 216 ++ ++++ V Sbjct: 217 LINKVIKDEV 226 >gi|317132133|ref|YP_004091447.1| ABC transporter related protein [Ethanoligenens harbinense YUAN-3] gi|315470112|gb|ADU26716.1| ABC transporter related protein [Ethanoligenens harbinense YUAN-3] Length = 256 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 13/26 (50%), Positives = 15/26 (57%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ 29 G FIS G G GKTT + L+ LQ Sbjct: 36 GEFISLLGPSGCGKTTLLRLVADLLQ 61 >gi|226467456|emb|CAX69604.1| uridylate kinase [Schistosoma japonicum] Length = 197 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 70/210 (33%), Gaps = 36/210 (17%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK T + + + VH++ RE + +E A + + Sbjct: 10 GGPGAGKGTVCQQIV---KEYGF-VHLSAGELLREARDSSDSEFASKIQMHMKNGTIVP- 64 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + ++ K +++ G + + L +++S Sbjct: 65 ------AKITCGLLYQAMKKNYENAK--------CTNFLVDGFPRNDDNR-LCWEEDLST 109 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182 V+ I+L+ P D+ ++R R+S R + + + E+ Q + Sbjct: 110 STVL-KRVIVLECPDDVCVQRCLGRHSNRIDDNEETLKLRIKQFKEQCMPVIQFY----- 163 Query: 183 NQPDRCH-IVDSAHSFQSVATNILNIVWEL 211 + +D+ S V + ++ L Sbjct: 164 -EKQNLVTRIDANKSIPEVYEQVRQMMQTL 192 >gi|170719541|ref|YP_001747229.1| signal recognition particle-docking protein FtsY [Pseudomonas putida W619] gi|169757544|gb|ACA70860.1| signal recognition particle-docking protein FtsY [Pseudomonas putida W619] Length = 514 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ + V + G T A A + + ++ A+ Sbjct: 315 GVNGAGKTTTIGKLAKKLQLEGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 370 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 371 TGADSASVIFDAVQAAKARGVDVLIAD 397 >gi|111023492|ref|YP_706464.1| signal recognition particle protein [Rhodococcus jostii RHA1] gi|110823022|gb|ABG98306.1| signal recognition particle protein [Rhodococcus jostii RHA1] Length = 528 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 22/157 (14%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60 G++G+GKTT L ++L+ + + + P A ++ G Sbjct: 107 GLQGSGKTTLAGKLAKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTS 166 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS 119 G + E V AA ++ + A + +++ D R + Sbjct: 167 IGGGDNELGVTAADPVEVARAGVEEARNKQFDVVIVD---------TAGRLGIDADLMAQ 217 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES 156 I V PD TI + L IG V + RE Sbjct: 218 AAGI-RDAVNPDETIFV-LDAMIGQDAVSTAEAFREG 252 >gi|16802849|ref|NP_464334.1| hypothetical protein lmo0807 [Listeria monocytogenes EGD-e] gi|224501889|ref|ZP_03670196.1| hypothetical protein LmonFR_05152 [Listeria monocytogenes FSL R2-561] gi|16410196|emb|CAC98885.1| lmo0807 [Listeria monocytogenes EGD-e] Length = 364 Score = 38.1 bits (88), Expect = 0.86, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F + G G GKTT + L+ FL+ +++ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYL 65 >gi|308476870|ref|XP_003100650.1| CRE-CHE-3 protein [Caenorhabditis remanei] gi|308264668|gb|EFP08621.1| CRE-CHE-3 protein [Caenorhabditis remanei] Length = 4175 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 23/113 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GK+T +L R L + VT+ R+ LL + + I+ Sbjct: 1920 GAAGSGKSTIWKVLHRALILTKKPLRVTQFNPKA----VNRNKLLGNMDMDTREWTDGII 1975 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 AAR + I ++CD ++++L + Sbjct: 1976 TMAAREVQKDTTI------HHWIVCD-------------GDIDPEWVEALNSV 2009 >gi|295705077|ref|YP_003598152.1| putative metal ABC transporter ATP-binding protein [Bacillus megaterium DSM 319] gi|294802736|gb|ADF39802.1| putative metal ABC transporter, ATP-binding protein [Bacillus megaterium DSM 319] Length = 427 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F++ G G+GKTT I L+ L ++ +V V Sbjct: 27 KGSFVALLGPNGSGKTTLIRLIMNVLTIQSGEVKV 61 >gi|294499689|ref|YP_003563389.1| putative metal ABC transporter ATP-binding protein [Bacillus megaterium QM B1551] gi|294349626|gb|ADE69955.1| putative metal ABC transporter, ATP-binding protein [Bacillus megaterium QM B1551] Length = 427 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 20/35 (57%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F++ G G+GKTT I L+ L ++ +V V Sbjct: 27 KGSFVALLGPNGSGKTTLIRLIMNVLTIQSGEVKV 61 >gi|294102040|ref|YP_003553898.1| signal recognition particle-docking protein FtsY [Aminobacterium colombiense DSM 12261] gi|293617020|gb|ADE57174.1| signal recognition particle-docking protein FtsY [Aminobacterium colombiense DSM 12261] Length = 310 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 16/36 (44%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 S I G+ G+GKTT + L R+ V + Sbjct: 101 KSPKVIVLVGVNGSGKTTTAAKLAEQFHRQGKKVIL 136 >gi|291278608|ref|YP_003495443.1| heme exporter ATP-binding protein [Deferribacter desulfuricans SSM1] gi|290753310|dbj|BAI79687.1| heme exporter ATP-binding protein [Deferribacter desulfuricans SSM1] Length = 238 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 20/36 (55%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 N G FIS G GAGK+T + LL ++ N D+ Sbjct: 28 NQGDFISIFGPNGAGKSTLLKLLSTQIRPTNGDIFF 63 >gi|311748547|ref|ZP_07722332.1| guanylate kinase [Algoriphagus sp. PR1] gi|126577066|gb|EAZ81314.1| guanylate kinase [Algoriphagus sp. PR1] Length = 192 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 6/102 (5%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLS--- 56 M G I F G+GKT+ + L + + + + TR+ G + LS Sbjct: 1 MTHGKAIIFSAPSGSGKTSLVRHLIQKIPNLGFSISACTRDKRGRHEVHGKDYYFLSQEQ 60 Query: 57 --CGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +D+ V+A ++ I+ GK ++ D Sbjct: 61 FKKHIDQDDFIEWEEVYAGNFYGTLKEEIQRIWDSGKAVIFD 102 >gi|116582914|gb|ABK00078.1| regulatory protein [Neisseria gonorrhoeae] Length = 140 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 52 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 106 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 107 TTGDSAAVCFDAVQAAKARGIDIVLAD 133 >gi|257076586|ref|ZP_05570947.1| cytidylate kinase [Ferroplasma acidarmanus fer1] Length = 180 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 58/214 (27%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRK----NYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + I+ G G+GKTT LL L K Y E + + + +D Sbjct: 1 MIITISGESGSGKTTVGKLLASSLNYKFFSGGYFFRKKAEEYNMDLIDFSNYAEHHPEID 60 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + H +++I + + G AY Sbjct: 61 KEEDRMIVEFM-----QHNDDIILESRLSGY-----------MAY--------------- 89 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + ++ + I L+ + + R+ +R +D I + R FL Sbjct: 90 -KNNINAIK----IYLNTDIATRVDRLASRDK-----GVDR-----AGIMTRARSEFLRY 134 Query: 181 A-------RNQPDRCHIVDSAH-SFQSVATNILN 206 R + +I+D+ H S +++ +I++ Sbjct: 135 MIFYGIDYRVFTNYDYIIDTDHISPENIVNDIVD 168 >gi|254495201|ref|ZP_05108125.1| deoxynucleoside kinase [Polaribacter sp. MED152] gi|85819553|gb|EAQ40710.1| deoxynucleoside kinase [Polaribacter sp. MED152] Length = 204 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 58/191 (30%), Gaps = 36/191 (18%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGKTT LL + + K + V P ++ + + + Sbjct: 10 GAGKTTLTKLLAKHYKWKPHFESVDENPYLDDFY---------GEMERWSFNLQVYFLNS 60 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQHLFLDSL-QE 122 I GK ++ DR + D+ + RD S + L L + Sbjct: 61 RFRQ-----ILELRETGKNIIQDRTIYEDAHIFAPNLHAMGLMTNRDYSNYSSLFELMEN 115 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + PD I L + + ++ R E++ + + + + Sbjct: 116 LVSP---PDLLIYLRADISTLVGQIHKRGREYENSI-------SIDYLSRLNERYEAWIS 165 Query: 183 NQ-PDRCHIVD 192 + ++D Sbjct: 166 TYTKGKLLVID 176 >gi|329770337|ref|ZP_08261720.1| hypothetical protein HMPREF0433_01484 [Gemella sanguinis M325] gi|328836695|gb|EGF86351.1| hypothetical protein HMPREF0433_01484 [Gemella sanguinis M325] Length = 331 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 7/93 (7%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I F G G+GK+T + L + V +P + +++ ++ G Sbjct: 141 LILFSGPTGSGKSTSMYKLASRCAQLGKQVLTIEDP----VEKNINNLIQMQINEKAGIT 196 Query: 66 AEAIVFAAARLD---HVENVIRPALMEGKILLC 95 E + + R D V +R G+++ Sbjct: 197 YENALKSMLRCDPDVLVVGEVRDYKTAGQVITS 229 >gi|326433541|gb|EGD79111.1| cytidylate kinase [Salpingoeca sp. ATCC 50818] Length = 196 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 67/212 (31%), Gaps = 43/212 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G GAGK T + + K+ D+ G+ AE + + E Sbjct: 13 GPPGAGKGTQCERIVDTYKFKHLSAGDLLRAERNSGSETAELINGYIKEGKIVPVAITIE 72 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 + A H +G + L D F ++ + G + Sbjct: 73 --LIHKAMEAH----------DGNLFLIDGFPRNADNFDGWAERMGDKVDARF------- 113 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-------I 180 + LD + +R R + S +D +V +KR + + + + Sbjct: 114 -----VLFLDCDEETSTQRCLQRAAS--SGRVD----DNVESLKKRHRTYEESTMPVIDL 162 Query: 181 ARNQP-DRCHIVDSAHSFQSVATNILNIVWEL 211 R + +R VD++ S +V + I E Sbjct: 163 FRKEGMER--RVDASESIDAVWEKVKEIFAEA 192 >gi|320331637|gb|EFW87575.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. glycinea str. race 4] gi|330872359|gb|EGH06508.1| signal recognition particle-docking protein FtsY [Pseudomonas syringae pv. glycinea str. race 4] Length = 500 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ V + G T A A + + + A+ Sbjct: 301 GVNGAGKTTTIGKLAKKLQLGGKKVMLAA--GDTFRAAAVEQLQVWGERNHIPVIAQH-- 356 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 357 TGADSASVIFDAVQAAKARGIDVLIAD 383 >gi|309781366|ref|ZP_07676102.1| deoxynucleoside kinase family protein [Ralstonia sp. 5_7_47FAA] gi|308919779|gb|EFP65440.1| deoxynucleoside kinase family protein [Ralstonia sp. 5_7_47FAA] Length = 214 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 57/177 (32%), Gaps = 22/177 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT L L+ T A H + Sbjct: 9 IVVEGPIGVGKTALAQRLADHLRAS------TLFETPAENA-FIAHFYEDPARYALPVQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFL--DSSYAYQGERDSSQHLFLDSL-QEI 123 ++ A RL A + G+ ++ D FL D +A Q + + D++ + Sbjct: 62 RFLLQRAERL----KAWHKATLAGERIVADSFLPRDRLFA-QLTLPADELALYDAMANAL 116 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 ++ + D + L + L RV R E+ D E+ + ++ Sbjct: 117 ALPQQRIDLVVCLQARAEDLLPRVTRRAVPYETGI-------DAEYLERICAAYGEL 166 >gi|309789647|ref|ZP_07684228.1| adenylate kinase [Oscillochloris trichoides DG6] gi|308228383|gb|EFO82030.1| adenylate kinase [Oscillochloris trichoides DG6] Length = 225 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 46/161 (28%), Gaps = 45/161 (27%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T L + + R L E + Sbjct: 8 GPPGAGKGTQAKTLSERTS-----------LSHVASGDLFRAALSEG--------TELGL 48 Query: 71 FA---AARLDHV----------ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 A R + V E + +P G ++ D F R Q L Sbjct: 49 LAKSYMDRGELVPDEVVIGMILERIAQPDCANG--VIFDGF---------PRTLEQATAL 97 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC 158 + ++ D + L +P D+ L+R+ R + + Sbjct: 98 EQ--ALAKHGSTIDAVLYLFVPQDVLLRRIAGRQTCKTCGA 136 >gi|306819648|ref|ZP_07453311.1| guanylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552293|gb|EFM40221.1| guanylate kinase [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 213 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 28/175 (16%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL I G G GK T + V TR P R Sbjct: 3 KKGLLIVVSGPAGVGKGTLCKAYIKKFDDMKLSVSTTTRNP---------REGEKDGVE- 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIR-PALMEGKILLCDRFLDSSYAY---QGERDSSQHLF 116 + +++ + +I L+E + D + +S + Q + + L Sbjct: 53 ----------YNFTTVENFKKMIESDDLLEYVNVF-DNYYGTSKKWVEEQIDAGNDIILE 101 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMI 169 +D + ++V++V D +I LP ++ R++NR + R I Sbjct: 102 IDIVGAMNVKKVYSDAILIFLLPPSYEVLKSRLENRKTESADQIQKRLSRMTQEI 156 >gi|198277594|ref|ZP_03210125.1| hypothetical protein BACPLE_03816 [Bacteroides plebeius DSM 17135] gi|198270092|gb|EDY94362.1| hypothetical protein BACPLE_03816 [Bacteroides plebeius DSM 17135] Length = 188 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 37/218 (16%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G I F G+GK+T I+ LL + L +R P GT L + Sbjct: 2 AGKLIIFSAPSGSGKSTIINYLLTQNLNLAFSISATSRAPRGTEQNGVEYFFLTPEEFKQ 61 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY---QGERDSSQHLFLD 118 A E + + E V + DRF + A Q + +D Sbjct: 62 RIANDEFLEY--------EEVYK-----------DRFYGTLKAQVEKQLAAGQNVIFDVD 102 Query: 119 SLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 + ++++ D ++ + P L+ ++ R + R + + E + + Sbjct: 103 VVGGCNIKKFYGDRALSVFIQ-PP--SLEELRKRLTGRGTDAPEVIES-------RLAKA 152 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +++ + IV+ + + L + + +Q+ Sbjct: 153 TFELSYAEKFDVVIVN--DNLEKAQEEALKTIRDFIQQ 188 >gi|170291122|ref|YP_001737938.1| nucleotide kinase [Candidatus Korarchaeum cryptofilum OPF8] gi|221272212|sp|B1L726|NTPTH_KORCO RecName: Full=Nucleoside-triphosphatase THEP1; Short=NTPase THEP1; AltName: Full=Nucleoside triphosphate phosphohydrolase gi|170175202|gb|ACB08255.1| Predicted nucleotide kinase [Candidatus Korarchaeum cryptofilum OPF8] Length = 195 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%) Query: 1 MNS-GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 M G FI G G+GK+T I LL L+ V R P Sbjct: 1 MRKEGKFIII-GRPGSGKSTCIMLLLEKLRASGTKVGGIRTPELRERG 47 >gi|169656604|ref|YP_001428504.2| cytidylate kinase [Francisella tularensis subsp. holarctica FTNF002-00] gi|164551672|gb|ABU61548.2| cytidylate kinase [Francisella tularensis subsp. holarctica FTNF002-00] Length = 234 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 68/249 (27%), Gaps = 71/249 (28%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF-------------------------LQRKNYDV 35 MN+ I+ +G G GK T L ++ L+ ++ Sbjct: 14 MNNSKIITIDGPSGVGKGTLAKALAKYYDFKLLDSGAIYRLAALHCFKNNASLENEDDVC 73 Query: 36 HVTREPG-GTPAAEAARHVLLSCGVDEFGAEAEAIVFAAA--------RLDHVENVIRPA 86 R + LS E I A+ R + A Sbjct: 74 KTLRNLDISFKIEDDLVKAFLSNQDVTKDIRTEQIGMLASKVAAYPTVRAILLNKQREFA 133 Query: 87 LMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 +G L+ D + + + LD +I KR Sbjct: 134 TEQG--LVADGRDMGTVVFPQAQYK----------------------FFLDASTEITAKR 169 Query: 147 VQNRYSLRESACLDYFER-----KDVMIHEKRRQIFLDIARNQPDR-CHIVDSAH-SFQS 199 + + FE+ K ++ R +A +P IVD++ S + Sbjct: 170 RYDELKTKGQKPN--FEKILADIKQRDFQDRNR----KVAPLRPANDAIIVDTSQLSIKE 223 Query: 200 VATNILNIV 208 V +++ + Sbjct: 224 VFDSVIKKI 232 >gi|153874953|ref|ZP_02002963.1| signal recognition particle-docking protein FtsY [Beggiatoa sp. PS] gi|152068583|gb|EDN67037.1| signal recognition particle-docking protein FtsY [Beggiatoa sp. PS] Length = 328 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 12/113 (10%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + Q + + V + G T A A + + +E A+ Sbjct: 133 GVNGAGKTTTIGKLAKRFQAQGHSVMLAA--GDTFRAAAVEQLKVWGERNEVPVIAQH-- 188 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 R D +VI AL R +D A R +Q ++ L+++ Sbjct: 189 ---DRADS-ASVIFDALQAATA----RGIDVLIADTAGRLHTQSNLMEELKKV 233 >gi|58580586|ref|YP_199602.1| adenylate kinase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84622536|ref|YP_449908.1| adenylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|81311969|sp|Q5H4A4|KAD_XANOR RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|123523026|sp|Q2P743|KAD_XANOM RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|58425180|gb|AAW74217.1| adenylate kinase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84366476|dbj|BAE67634.1| adenylate kinase [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 187 Score = 38.1 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 68/208 (32%), Gaps = 33/208 (15%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G G+GK T + LK T E + R + + A+ Sbjct: 4 VLLGPPGSGKGTQATRLKD-----------TFEIPHISTGDLLRAEVAAGSPLGLKAKE- 51 Query: 68 AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 AR D V + I ++E ++ D + + G + ++L + + Sbjct: 52 ----VMARGDLVSDDILLGMLEARLGQAD--VAKGFILDGYPRNVAQA--NALCALLSKI 103 Query: 128 VMP-DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR---- 182 P D + LD+ ++ ++R+ R E D E KR Q++ D Sbjct: 104 GQPLDAVVQLDVASELLVERIAGRAKA-EGREDDNPESV-----RKRLQVYTDSTAPVIG 157 Query: 183 --NQPDRCHIVDSAHSFQSVATNILNIV 208 Q + VD S V I + Sbjct: 158 FYEQRGKLTRVDGVGSLDEVLERIRKAL 185 >gi|326387332|ref|ZP_08208942.1| hypothetical protein Y88_1382 [Novosphingobium nitrogenifigens DSM 19370] gi|326208513|gb|EGD59320.1| hypothetical protein Y88_1382 [Novosphingobium nitrogenifigens DSM 19370] Length = 814 Score = 38.1 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 21/64 (32%), Gaps = 5/64 (7%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA--EAARHVLLSCGVDEF 62 + I G GAGKTT + L + + V G A E R +L+ Sbjct: 243 MLI---GTTGAGKTTQLRKLVTEARERGQRCVVFDLTGAFVEAFYEEGRDHILNPMDQRC 299 Query: 63 GAEA 66 Sbjct: 300 PPWT 303 >gi|321469998|gb|EFX80976.1| hypothetical protein DAPPUDRAFT_303689 [Daphnia pulex] Length = 421 Score = 38.1 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 14/105 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV------D 60 + G GKTT S L F + + V E T + + LS + Sbjct: 14 VVLTGGPCGGKTTGQSRLCTFFENLGWKVFRVPETASTLLSGGVKFADLSPEDAITFQEN 73 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + A +H I++CDR + A+ Sbjct: 74 LLKTMIQMENTFFALAEHF--------NRDCIIICDRGTMDASAF 110 >gi|289522955|ref|ZP_06439809.1| cytidylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503498|gb|EFD24662.1| cytidylate kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 230 Score = 38.1 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 2/30 (6%) Query: 1 MNSGL--FISFEGIEGAGKTTHISLLKRFL 28 M SG I+ +G G+GK++ + L Sbjct: 1 MKSGKTIIITIDGPAGSGKSSVARRVAEEL 30 >gi|188590750|ref|YP_001921213.1| deoxyguanosIne kinase [Clostridium botulinum E3 str. Alaska E43] gi|188501031|gb|ACD54167.1| deoxyguanosIne kinase [Clostridium botulinum E3 str. Alaska E43] Length = 217 Score = 38.1 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 25/165 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ + GAGK++ ++ DV P + + DE Sbjct: 1 MLITVGAMIGAGKSSLAKIIGEHF---GTDVFYES-VDDNPILP----LFYTASDDEIQQ 52 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL--------- 115 + + L+ I+ AL+ +L DR + + + + Sbjct: 53 KRYPFLLQLWFLNTRFKSIKKALVNDNNVL-DRSIYEDWYFAKVNRDLGRISDLEFNIYE 111 Query: 116 -----FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRE 155 L+ L E+ + PD I L + L R++ R E Sbjct: 112 ELLNNMLEELDELPKKA--PDLMIYLSGRFETILDRIRKRGRGYE 154 >gi|167036150|ref|YP_001671381.1| signal recognition particle-docking protein FtsY [Pseudomonas putida GB-1] gi|166862638|gb|ABZ01046.1| signal recognition particle-docking protein FtsY [Pseudomonas putida GB-1] Length = 510 Score = 38.1 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I L + LQ V + G T A A + + ++ A+ Sbjct: 313 GVNGAGKTTTIGKLAKKLQLDGKKVMLAA--GDTFRAAAVEQLQVWGERNQIPVIAQH-- 368 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +L+ D Sbjct: 369 TGADSASVIFDAVQAAKARGVDVLIAD 395 >gi|126303607|ref|XP_001380527.1| PREDICTED: similar to XPA binding protein 1 [Monodelphis domestica] Length = 383 Score = 38.1 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 11/97 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYD---------VHVTREPGGTPAAEAA--RHVLLSCGV 59 G+ G+GKTT + L +L VH P + + V+ G+ Sbjct: 34 GMAGSGKTTFVQRLTGYLHGLGSPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGL 93 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G ++ A R D V I + + +L D Sbjct: 94 GPNGGIVTSLNLFATRFDQVMKFIEKSQNMSQYVLID 130 >gi|125972918|ref|YP_001036828.1| ABC transporter related protein [Clostridium thermocellum ATCC 27405] gi|125713143|gb|ABN51635.1| ABC transporter related protein [Clostridium thermocellum ATCC 27405] Length = 586 Score = 38.1 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 14/103 (13%) Query: 7 ISFEGIEGAGKTTHISLLKRF-------LQRKNYDVH-VTREPGGTPAAEAARHVLLSCG 58 ++ G G+GKTT I+LL RF ++ + D+ +TR+ + L G Sbjct: 377 VAIVGPTGSGKTTVINLLMRFYDVDSGSIKVEGIDIRNITRQSLRENYGMVLQDTWLKSG 436 Query: 59 VDEFG------AEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 E + AA+ H + I+ ++ Sbjct: 437 TIRENITMGKPDATEEEIITAAKAAHAHSFIKRLENGYDTVIS 479 >gi|328872982|gb|EGG21349.1| hypothetical protein DFA_01230 [Dictyostelium fasciculatum] Length = 246 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 33/153 (21%), Positives = 50/153 (32%), Gaps = 17/153 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNY-----DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G GAGK+T + L L ++ V V + + LL + Sbjct: 51 GAPGAGKSTLSAALFTRLNDHHHHHQIKTVVVPMDGFHMDNGVLEKRGLLPRKGSPPTFD 110 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + RL P ++ I L DR LD S A G D + L + + Sbjct: 111 CDGFYHLLNRLKKQTQQEEPEIL---IPLFDRKLDVSKAGAGIVDYQDEILLVEGNYLLL 167 Query: 126 QEVMP--------DCTIILDLPVDIGLKRVQNR 150 ++ P D TI L + R+ R Sbjct: 168 KDT-PWNRLANIFDFTIFLQVDRAELENRLIQR 199 >gi|325928579|ref|ZP_08189766.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate kinase RaxQ [Xanthomonas perforans 91-118] gi|325541055|gb|EGD12610.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate kinase RaxQ [Xanthomonas perforans 91-118] Length = 505 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+ + L Y +L G + Sbjct: 340 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 382 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R G I+L S + D + + Sbjct: 383 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 436 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + +D+P+ + R Sbjct: 437 --------VFVDVPLAVAEAR 449 >gi|322828260|gb|EFZ32151.1| hypothetical protein TCSYLVIO_1516 [Trypanosoma cruzi] Length = 889 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 2/99 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G +GKT+ +S L+R ++ N++V E + +++LS + + Sbjct: 365 VVITGGPCSGKTSCLSYLRRVFEKLNFNVFCVPEVATLLHSGGV-NLILSTSEERITQQR 423 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 + D + ++L DR AY Sbjct: 424 VILQMMMMLEDAFYELAS-MRSRPSLILYDRGTMDGSAY 461 >gi|322631610|gb|EFY28366.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] Length = 419 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|319934763|ref|ZP_08009208.1| ABC transporter ATP-binding protein [Coprobacillus sp. 29_1] gi|319810140|gb|EFW06502.1| ABC transporter ATP-binding protein [Coprobacillus sp. 29_1] Length = 232 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 30/75 (40%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 ++ G I G G+GKTT I +L L+ + + +P G + E ++ + Sbjct: 27 LSGGKIIGLLGPNGSGKTTLIKILNGLLKDYTGHITIDGQPIGVHSKELISYLPDEPYFE 86 Query: 61 EFGAEAEAIVFAAAR 75 + +A+ Sbjct: 87 NWMTTTDALNLFNDM 101 >gi|283457582|ref|YP_003362165.1| hypothetical protein RMDY18_05130 [Rothia mucilaginosa DY-18] gi|283133580|dbj|BAI64345.1| uncharacterized conserved protein [Rothia mucilaginosa DY-18] Length = 355 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 42/159 (26%), Gaps = 45/159 (28%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG + AGK I L + V +P + Sbjct: 127 LIIFEGRDAAGKGGSIKRFTEHLNPRGARVVALEKPTDIEQTQW---------------- 170 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + I+ G+I+L DR S Y G + E Sbjct: 171 ------------YFQRYIKHLPSGGEIVLMDR---SWYNRAGVERVMGYCTQAQYFEFMR 215 Query: 126 QEVMPDC------------TIILDLPVDIGLKRVQNRYS 152 + +PD + + L R +R + Sbjct: 216 E--VPDLERMLVNSGIHIIKFWFSVTREEQLARFTSRRT 252 >gi|265751728|ref|ZP_06087521.1| TraA protein [Bacteroides sp. 3_1_33FAA] gi|263236520|gb|EEZ21990.1| TraA protein [Bacteroides sp. 3_1_33FAA] Length = 349 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 36/145 (24%) Query: 1 MNSGLFISF---EGIEGAGKTTHISLLKRFL---QRKNYDVHVTREPGGTPAAEAARHVL 54 M++ +F++F +G G GK+T +L +L Q N V P + R Sbjct: 97 MSNEIFVAFATQKG--GIGKSTVTALAASYLHNVQGHNVAVIDCDAPQHSIHGLRERETK 154 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 L E++ F A DH + + AY + + Sbjct: 155 LID---------ESLYFKALACDHFRKIKKN------------------AYPVIASDALN 187 Query: 115 LFLDSLQEISVQEVMPDCTIILDLP 139 D+ + ++ ++ PD D+P Sbjct: 188 ALDDAERMLAEEDAKPDIVF-FDMP 211 >gi|284031437|ref|YP_003381368.1| ABC transporter-like protein [Kribbella flavida DSM 17836] gi|283810730|gb|ADB32569.1| ABC transporter related protein [Kribbella flavida DSM 17836] Length = 317 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 61/213 (28%), Gaps = 32/213 (15%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL---------SCGV 59 F G GAGKTT I LL L + V P PA R +L G Sbjct: 37 FLGPNGAGKTTAIRLLTTVLAADSGSFTVAGVPHTRPAQIRRRVGVLPESAGYPPAQSGE 96 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + AE +F R D R G L DR AY + Sbjct: 97 EWLRYHAE--LFGRDRADARGTARRLLSDVG---LADRGSALISAYSRGMRQRLGIARAL 151 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 + + PD + LD +GL + L + V++ L Sbjct: 152 VND-------PD-VVFLD-EPALGLDPMGQAQVLDLIGRIARDRGATVLLSTHV----LA 198 Query: 180 IARNQPDRCHIVD-----SAHSFQSVATNILNI 207 DR I++ + + V Sbjct: 199 DVEQVCDRVVILNRGKVVAEGTVAEVVRKAAAA 231 >gi|193065946|ref|ZP_03047006.1| ABC transporter-related protein [Escherichia coli E22] gi|192926450|gb|EDV81084.1| ABC transporter-related protein [Escherichia coli E22] Length = 581 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 17/27 (62%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 SG FI+ G G+GK+T + +L R L Sbjct: 361 RSGEFITITGKSGSGKSTLLKILARQL 387 >gi|161507209|ref|YP_001577163.1| excinuclease subunit A [Lactobacillus helveticus DPC 4571] gi|160348198|gb|ABX26872.1| Excinuclease subunit A [Lactobacillus helveticus DPC 4571] Length = 946 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 628 GKFIVVSGVSGSGKSTLVNMILKRVLAQK 656 >gi|154334723|ref|XP_001563608.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060630|emb|CAM37642.1| conserved hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 214 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 53/206 (25%), Gaps = 57/206 (27%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G+GKTT + L + G A+ + Sbjct: 58 GPCGSGKTTLAAKLAAH-----------------YGIAHVSATVADVGDVAMPADMLGEL 100 Query: 71 FAAARLDHVENVIRPALMEGK-ILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 + EGK +L D D++ ++ + Sbjct: 101 -------------KGLQQEGKGWVL---------------DGFPQTRADAI-QLQTSGIS 131 Query: 130 PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL----DIARNQP 185 P L +P + L+R + K ++ +I + Sbjct: 132 PQLLFELQVPPAVALERATAHAGASSKHT------EAAAPIVKSYHLYDVRRTEIVTSYQ 185 Query: 186 DRCHIVDSAHSFQSVATNILNIVWEL 211 +D+ + VA N++ + L Sbjct: 186 PFYRAIDATVTADEVAANVMKAIDTL 211 >gi|17228647|ref|NP_485195.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] gi|8453093|gb|AAF75229.1|AF220507_2 cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] gi|17130498|dbj|BAB73109.1| cytosine-specific DNA methyltransferase [Nostoc sp. PCC 7120] Length = 293 Score = 38.1 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 68/233 (29%), Gaps = 79/233 (33%) Query: 16 GKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF-----GAEAEAIV 70 GK+ I + +L ++ REP + + L + E + Sbjct: 11 GKSKAIKQIIEYLPESFHE---YREPF---VGGGSVFIYLKQKFPDLKIWINDLNTELFL 64 Query: 71 F----AAARLDHVENV--IRPALMEGKIL-----------LCD-----RFL--------- 99 F + V+ + I+ +GK+L L D RF Sbjct: 65 FWKIAQSDLSQLVKEIRRIKDKYQDGKLLFLELTTVDVISLSDLDRAVRFFVLNRITFSG 124 Query: 100 ------DSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT----------------IILD 137 S A+Q S L+ L+ I +++ T I LD Sbjct: 125 TVESGGFSQQAFQKRFTHSSIERLEKLENILTEDIK--ITNLDYSQLLNNEQNDVFIFLD 182 Query: 138 LPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI 190 P ++R ++ FE H++ F + + P R I Sbjct: 183 -PPYYSA--TKSRLYGKDGELHTSFE------HQR----FAALLQQCPQRWLI 222 >gi|329929846|ref|ZP_08283522.1| cytidylate kinase [Paenibacillus sp. HGF5] gi|328935824|gb|EGG32285.1| cytidylate kinase [Paenibacillus sp. HGF5] Length = 226 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 73/227 (32%), Gaps = 45/227 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ +G GAGK+T ++ LQ Y + E VL Sbjct: 14 IAIDGPAGAGKSTVARMVASRLQYIYVDTGAMYRAVTWFMLNQGISPENPEKVLQHAQNM 73 Query: 61 EFGAEAEAIVF-AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 E + + + P + ++ S+ Q R + L Sbjct: 74 VI----ELKLHENGQMVWLNGEDVTPYIRSHQV--------SAVVSQYARIEGLRIKLVR 121 Query: 120 LQE-------ISVQEVMPDC--TIILDLPVDIGL-----KRVQNRYSLRESACLDYFERK 165 LQ+ + + D T++ D V I + +R R+ + E+ Sbjct: 122 LQQQMALDKGVVMDGR--DIGTTVLPDAEVKIFMTASVKERALRRFHELSDEGI-TLEQL 178 Query: 166 DVMIHEKRRQIFLDIARN-QPDRC----HIVDSAH-SFQSVATNILN 206 + I E+ R LD R P RC I+D+ H V IL+ Sbjct: 179 ERDIAERDR---LDQEREVSPLRCAEDAIILDTTHMDINQVVEAILS 222 >gi|322695894|gb|EFY87695.1| BcatrD protein [Metarhizium acridum CQMa 102] Length = 1435 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 52/166 (31%), Gaps = 34/166 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVHVTRE-PGGTPAAEAARHVLLSCG 58 + G G GAGKTT + +L R L+ + + P G R + Sbjct: 866 LKPGSLTVLMGATGAGKTTLLDVLAGRALRGEAHGTIFVDGRPRGATGDYQQRMGYVKQD 925 Query: 59 VDEFGAEA--EAIVFAAARLD---------------------------HVENVIRPALME 89 + EA+ F+A + ++R Sbjct: 926 DNHLPTSTVREALQFSAQLRQPSTRSKSEKLAYAENEPTSGLDSQTAWSICTLLRKLADN 985 Query: 90 GKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTII 135 G +LC S+ Q + L L S + + ++ PD T++ Sbjct: 986 GHTILCTVHQPSA---QLFNQFDRLLLLRSGETVYFGDIGPDATVL 1028 >gi|260892198|ref|YP_003238295.1| ABC transporter related protein [Ammonifex degensii KC4] gi|260864339|gb|ACX51445.1| ABC transporter related protein [Ammonifex degensii KC4] Length = 393 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 + G I F G GAGK+T + + L V++ E Sbjct: 27 HKGELICFLGPNGAGKSTLLKTVAGLLAPLGGAVYLKGE 65 >gi|302921986|ref|XP_003053372.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256734313|gb|EEU47659.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 207 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 32/151 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G+ +GK+T + L++ L + L Sbjct: 22 QRGLTIWLTGLSASGKSTVATALEQHLLHLGVAAYR-----------------LDGDNVR 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-SSYAYQGERD--SSQHLFLD 118 FG + A R +++ + A + F D S+ A + Sbjct: 65 FGLNKDLGFSEADRNENIRRISEVAKL---------FADASTIAITSFISPYKADRQVAR 115 Query: 119 SLQEISVQE---VMPDCTIILDLPVDIGLKR 146 L + Q +P + +D+P+++ +R Sbjct: 116 ELHAQATQGGDEAIPFVEVYVDVPLEVAEQR 146 >gi|195151931|ref|XP_002016892.1| GL22014 [Drosophila persimilis] gi|194111949|gb|EDW33992.1| GL22014 [Drosophila persimilis] Length = 249 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 57/216 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T S + T A + R G + Sbjct: 66 GGPGAGKGTQCSKIVNRF-------LFT----HLSAGDLLREERSREGSE---------- 104 Query: 71 FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125 ++I + GKI+ + S + +D + ++ Sbjct: 105 --------FGSLIEDYIRNGKIVPVEI----TCSLLENAMKNSGKSLFLIDGFPRNQDNL 152 Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 M D + D ++ +KR R D E +KR Q + Sbjct: 153 DGWNRQMSDKVDVQFVLFFDCDEEVCVKRCLIRGQGGSGRSDDNLES-----LKKRIQTY 207 Query: 178 LD----IAR--NQPDRCHIVDSAHSFQSVATNILNI 207 + I + + + +D++ V + Sbjct: 208 NNDSMPIIKYFDDAGQVKRIDASPDADQVFREVERT 243 >gi|146325075|sp|Q8Y8T6|POTA_LISMO RecName: Full=Spermidine/putrescine import ATP-binding protein PotA Length = 366 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 18/35 (51%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F + G G GKTT + L+ FL+ +++ Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEASKGQIYL 67 >gi|91201958|emb|CAJ75018.1| strongly similar to guanylate kinase [Candidatus Kuenenia stuttgartiensis] Length = 181 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 68/210 (32%), Gaps = 38/210 (18%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 G + G G+GKTT +LK+ + TR P + H + E Sbjct: 2 GKIVIISGPSGSGKTTVCKILKQQAHVEESISVTTRSPRNNEKDGESYHFVSKEKFMEMI 61 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E +A + ++P K +D L +D + Sbjct: 62 KNGEFAEYAEYCGYNYGTPLKPLQEATK-----------------KDIFYLLEIDVQGAL 104 Query: 124 SVQEVMPDCTIILDLPVD--IGLKRVQNRYSLRESACLDYF---ERKDVMIHEKRRQIFL 178 ++E P+ +I LP + +R+ NR + + ++ E++ + +K Sbjct: 105 QIKEKFPEAILIFLLPPNNVTLSQRLINRNTDKAQDLVNRLKMAEKE-LEYKDKY----- 158 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIV 208 D C + + I NI+ Sbjct: 159 -------DYCVV---NDDLDATVNAIRNIL 178 >gi|15642964|ref|NP_228006.1| iron(III) ABC transporter, ATP-binding protein, putative [Thermotoga maritima MSB8] gi|4980687|gb|AAD35283.1|AE001704_4 iron(III) ABC transporter, ATP-binding protein, putative [Thermotoga maritima MSB8] Length = 258 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 G I+ G GAGK+T + + L+ + ++ Sbjct: 25 QKGELIAILGPNGAGKSTLLKCIAGILKCQGVEIF 59 >gi|70984523|ref|XP_747768.1| ABC multidrug transporter [Aspergillus fumigatus Af293] gi|66845395|gb|EAL85730.1| ABC multidrug transporter, putative [Aspergillus fumigatus Af293] Length = 1287 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVLL 55 G F++F G G GK+T I+LL RF Y R + R + L Sbjct: 1066 GKFVAFVGPSGCGKSTMINLLARFYDPTSGYIAVNDRPIHDLSPQDHRRRLAL 1118 >gi|23011698|ref|ZP_00051982.1| COG1102: Cytidylate kinase [Magnetospirillum magnetotacticum MS-1] Length = 212 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 77/239 (32%), Gaps = 49/239 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH-------VTREPGGTPAAEAARHV 53 M++ ++ G G+GKTT L L V +T P A R Sbjct: 1 MSAPFVLAVAGPPGSGKTTLSRALAERL--GGAPVLSYDAYEEITGWPPERVAEWLRRGA 58 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQ 113 L AE A + R + V P G IL R Sbjct: 59 ALDEVPVPGLAEDLARL---RRGEPV-----PDRERGGIL-----------RPSRRGGRP 99 Query: 114 HLFLDSLQEISVQEV--MPDCTIILDLPVDIGLKRV------QNRYS-----LRESACLD 160 + LD+L + D + LDLP+D+ L R + R A Sbjct: 100 VIVLDTLLGRAHPGTGAQIDHLVWLDLPLDVALARKLRSFTGEARQDPAAAPALLGALDA 159 Query: 161 YFERKDVMIHEKRRQIFLDIARNQP--DRCHIVDSAHSFQSVATNILNIVWELVQKRVS 217 Y R D ++H L AR +P DR +A + IL+ + + + R + Sbjct: 160 YLGRYDSLLHPTYA---LQRARIRPGADRIL---AAGTLAEYLAAILSDLPDALTPRTA 212 >gi|297181002|gb|ADI17203.1| hypothetical protein [uncultured delta proteobacterium HF0070_10I02] Length = 345 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 31/87 (35%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT I L + V + G T A A L + A Sbjct: 143 GVNGSGKTTTIGKLAHQYTEQGKKVLLAA--GDTFRAGAIEQ--LQVWGERVNIPVIAHQ 198 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I+ + +++CD Sbjct: 199 EGADPAAVIYDGIQAGIARKMDVVICD 225 >gi|299139152|ref|ZP_07032328.1| adenylate kinase [Acidobacterium sp. MP5ACTX8] gi|298598832|gb|EFI54994.1| adenylate kinase [Acidobacterium sp. MP5ACTX8] Length = 235 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 34/230 (14%), Positives = 63/230 (27%), Gaps = 51/230 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G G GK T LL N T + R G Sbjct: 20 GAPGVGKGTQAKLLMDEF---NIPQIST--------GDLLRE--HRRNHTPLG------- 59 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLD--SSYAYQGERDSSQHLFLDSLQEISVQEV 128 A L ++ L+ + + RF D + + Y + + L V + Sbjct: 60 MLADELMSQGKLVPDDLVNQMVAV--RFQDPDTQHGYILDGFPRTLNQAEWLDGQLVAYL 117 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLD-----------------YFERKDVM--- 168 +P + + + + L+R+ R + E++ Sbjct: 118 LPVVAVNIVVDEKVLLERITGRRISPAGRIYNIYTTPPKVEGICDVDGSKLEQRADDTEE 177 Query: 169 -IHEKRR------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 HE+ + ++ R+ +R VD V I + +L Sbjct: 178 VFHERMKTFRVKTAAVIEYYRSHGNRFAEVDGDRPVDEVTKGIRAALLKL 227 >gi|297531066|ref|YP_003672341.1| spermidine/putrescine ABC transporter ATPase [Geobacillus sp. C56-T3] gi|297254318|gb|ADI27764.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus sp. C56-T3] Length = 353 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M G F + G G GKTT + L+ F++ Sbjct: 29 MERGKFYTLLGPSGCGKTTILRLIAGFIE 57 >gi|292654598|ref|YP_003534495.1| P-loop ATPase of the PilT family [Haloferax volcanii DS2] gi|291370634|gb|ADE02861.1| P-loop ATPase of the PilT family [Haloferax volcanii DS2] Length = 626 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 2/68 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+ G GAGK+T + FL +Y V +P G Sbjct: 260 QRGVLIA--GSPGAGKSTFAQAVAEFLNDSDYAVKTMEKPRDLQVGPDITQYTALGGDMA 317 Query: 62 FGAEAEAI 69 A++ + Sbjct: 318 KTADSLLL 325 >gi|260102500|ref|ZP_05752737.1| excision endonuclease subunit UvrA [Lactobacillus helveticus DSM 20075] gi|260083705|gb|EEW67825.1| excision endonuclease subunit UvrA [Lactobacillus helveticus DSM 20075] Length = 967 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 649 GKFIVVSGVSGSGKSTLVNMILKRVLAQK 677 >gi|255531917|ref|YP_003092289.1| ABC transporter-like protein [Pedobacter heparinus DSM 2366] gi|255344901|gb|ACU04227.1| ABC transporter related [Pedobacter heparinus DSM 2366] Length = 605 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 14/27 (51%), Positives = 17/27 (62%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 M SG I+ G+ GAGK+T I LL R Sbjct: 382 MPSGKIIAVVGMNGAGKSTLIKLLCRL 408 >gi|261418969|ref|YP_003252651.1| spermidine/putrescine ABC transporter ATPase [Geobacillus sp. Y412MC61] gi|319765786|ref|YP_004131287.1| spermidine/putrescine ABC transporter ATPase [Geobacillus sp. Y412MC52] gi|261375426|gb|ACX78169.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus sp. Y412MC61] gi|317110652|gb|ADU93144.1| spermidine/putrescine ABC transporter ATPase subunit [Geobacillus sp. Y412MC52] Length = 353 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M G F + G G GKTT + L+ F++ Sbjct: 29 MERGKFYTLLGPSGCGKTTILRLIAGFIE 57 >gi|126305561|ref|XP_001375190.1| PREDICTED: similar to Deoxyguanosine kinase [Monodelphis domestica] Length = 277 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 79/245 (32%), Gaps = 48/245 (19%) Query: 8 SFEGIEGAGKTTHISLLKRFLQR-----------KNYDVHVTREPGGTP---AAEAARHV 53 + EG GK+T + LL + +N T P P + Sbjct: 41 AVEGNIAVGKSTFVKLLVKTFPEWHIAAEPITTWQNIQAVGT--PTAGPPQSVGNLLDMM 98 Query: 54 LLSCGVDEFGAEAEAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGE 108 + + +++ A + + +P + + + DR++ + ++ Sbjct: 99 YQQPSRWSYTFQTFSLLSRLKAQLAPSPERLWQAQQPMHVFERTVYSDRYIFAKNLFENR 158 Query: 109 RDSSQHLFLDS------LQEIS----VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157 + + LQE + + I L I LKR+ R + E Sbjct: 159 FLNDVEWAIYQNWHSFLLQEFTSHMLLDGF-----IYLQAAPQICLKRLHRRARVEEKGL 213 Query: 158 CLDYFER-----KDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVA---TNILNIVW 209 L Y E+ +D IH K ++ + + P ++D F VA ++ V Sbjct: 214 ELGYLEQLHAQHEDWFIH-KVTELHFEHLKKTP--VLVLDVNEDFSEVAAKQEELMRKVN 270 Query: 210 ELVQK 214 V+ Sbjct: 271 SFVKD 275 >gi|78044915|ref|YP_361478.1| adenylylsulfate kinase [Carboxydothermus hydrogenoformans Z-2901] gi|77997030|gb|ABB15929.1| adenylylsulfate kinase [Carboxydothermus hydrogenoformans Z-2901] Length = 197 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 48/148 (32%), Gaps = 34/148 (22%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I G+ G+GK+T L+ L R+ + +L Sbjct: 23 QKGVVIWLTGLSGSGKSTIARELEAVLYRQGKLAY-----------------VLDGDNIR 65 Query: 62 FGAEAEAIVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 G + R +++ V + + G I++ A+ + + Sbjct: 66 MGLNKDLGFSEKDRQENIRRIGEVAKLFVDAGIIVIT--------AFISPFRADRDKVRS 117 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKR 146 L + + + + +D P+++ R Sbjct: 118 IL--PAGKFIE----VFVDCPLEVCEAR 139 >gi|56419258|ref|YP_146576.1| spermidine/putrescine ABC transporter ATP-binding protein [Geobacillus kaustophilus HTA426] gi|81347960|sp|Q5L222|POTA_GEOKA RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|56379100|dbj|BAD75008.1| spermidine/putrescine ABC transporter (ATP-binding protein) [Geobacillus kaustophilus HTA426] Length = 353 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 16/29 (55%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M G F + G G GKTT + L+ F++ Sbjct: 29 MERGKFYTLLGPSGCGKTTILRLIAGFIE 57 >gi|121999128|ref|YP_001003915.1| adenylyl-sulfate kinase [Halorhodospira halophila SL1] gi|121590533|gb|ABM63113.1| adenylylsulfate kinase [Halorhodospira halophila SL1] Length = 199 Score = 38.1 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + L+ L + + LL G + + Sbjct: 34 GLSGSGKSTLANALEHALHQCGHH-----------------SFLLDGDNIRHGLNRDLDL 76 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 A R +++ V R L G I++ Sbjct: 77 STAGRQENIRRIGEVTRLLLDAGLIVVT 104 >gi|326427992|gb|EGD73562.1| hypothetical protein PTSG_05269 [Salpingoeca sp. ATCC 50818] Length = 2003 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N GL I+ G G GK++ ++ L ++ V+ G P + +L+ Sbjct: 604 NKGLLIT--GPAGVGKSSLVAKAAEQLNARDNVDVVSFFVGTNPESFDLLEMLIFLIHQL 661 Query: 62 FGAEAEAIVFAAARLDHV 79 A F +L + Sbjct: 662 DKLRAVPFYFEKNKLQSI 679 >gi|325282661|ref|YP_004255202.1| Adenylate kinase [Deinococcus proteolyticus MRP] gi|324314470|gb|ADY25585.1| Adenylate kinase [Deinococcus proteolyticus MRP] Length = 200 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 66/210 (31%), Gaps = 30/210 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + F G GAGK T L + R + + Sbjct: 9 VIFLGPPGAGKGTQAERLAAA-----------YGLTKVSTGDILRD---HVARETALGQQ 54 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCD--RFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A + AA V + I AL+ +I + R + + + ++ L L+ L Sbjct: 55 VAPILAAG--QLVPDDILVALIRDRICTMEPVRIIFDGFPRTQAQANALDLLLEELGAPV 112 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----I 180 ++L++P + + R+ R +A + +R++++ + Sbjct: 113 SAA------VLLEVPDEELIGRIVERGRQAAAAGEPVRSDDTEEVARRRQEVYRQETAPL 166 Query: 181 ARNQP--DRCHIVDSAHSFQSVATNILNIV 208 + R VD + V I ++ Sbjct: 167 IEHYQRTGRLTEVDGTGTMDEVYARIEQVI 196 >gi|315927340|gb|EFV06684.1| polyphosphate kinase 2 domain protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 261 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%) Query: 3 SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 GL I EG + AGK I L L + V +P + Sbjct: 52 KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + + I G+I++ DR Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123 >gi|256828204|ref|YP_003156932.1| signal recognition particle-docking protein FtsY [Desulfomicrobium baculatum DSM 4028] gi|256577380|gb|ACU88516.1| signal recognition particle-docking protein FtsY [Desulfomicrobium baculatum DSM 4028] Length = 524 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 18/133 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT I+ L Q + V V G T A A L GA A Sbjct: 330 GVNGAGKTTTIAKLAHRAQMQGRKVLVAA--GDTFRAAAIEQ--LQVWSKRVGAGFYAKA 385 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS--VQEV 128 + + A+ EG L+ F+D+ R ++H ++ L++I+ + + Sbjct: 386 HGSDPAAVAFEAVEYAMKEGYDLV---FVDT-----AGRLQTKHNLMEELKKINRVLGKK 437 Query: 129 M---PDCTII-LD 137 + P TI+ LD Sbjct: 438 LEGAPHRTILVLD 450 >gi|224049523|ref|XP_002196843.1| PREDICTED: 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Taeniopygia guttata] Length = 603 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P T + R L F E Sbjct: 38 GLSGAGKTTVSMALEEYLVCHGI-------PCYTLDGDNIRQGL--NKNLGFTPE----- 83 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ + I +P Sbjct: 84 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYAQDRNNARRIHEGASLP 131 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 132 FFEVFVDAPLHVCEQR 147 >gi|223673939|pdb|3CR7|A Chain A, Crystal Structure Of N-Terminal Truncation Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Paps gi|223673940|pdb|3CR7|B Chain B, Crystal Structure Of N-Terminal Truncation Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Paps gi|223673941|pdb|3CR7|C Chain C, Crystal Structure Of N-Terminal Truncation Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Paps gi|223673942|pdb|3CR7|D Chain D, Crystal Structure Of N-Terminal Truncation Of Aps Kinase From Penicillium Chrysogenum: Ternary Structure With Adp And Paps Length = 197 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 31/151 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 GL I G+ +GK+T L+ L ++ VH R L Sbjct: 1 QRGLTIWLTGLSASGKSTLAVELEHQLV-RDRRVHAYR---------------LDGDNIR 44 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118 FG + A R +++ + A + F DS S A Sbjct: 45 FGLNKDLGFSEADRNENIRRIAEVAKL---------FADSNSIAITSFISPYRKDRDTAR 95 Query: 119 SLQEISVQEV---MPDCTIILDLPVDIGLKR 146 L E++ +P + +D+PV++ +R Sbjct: 96 QLHEVATPGEETGLPFVEVYVDVPVEVAEQR 126 >gi|254501089|ref|ZP_05113240.1| sulfate adenylyltransferase, large subunit subfamily, putative [Labrenzia alexandrii DFL-11] gi|222437160|gb|EEE43839.1| sulfate adenylyltransferase, large subunit subfamily, putative [Labrenzia alexandrii DFL-11] Length = 644 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 66/202 (32%), Gaps = 40/202 (19%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T SL+++ L + + L G + Sbjct: 467 FTGLSGSGKSTIASLVEKRLHAEGRHTYT-----------------LDGDNVRHGLNRDL 509 Query: 69 IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEV 128 A R++++ V A L+ D L + ++ S + + D + E E Sbjct: 510 GFTDADRVENIRRVGEVA-----TLMSDAGLITLVSFISPFRSERQMARDLMGE---GEF 561 Query: 129 MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD-R 187 + +D P++ KR E ++ + A P+ R Sbjct: 562 ---IEVFVDTPIEECKKR-------DPKGLYAKAEAGEIKNFTGIDSPYE--APENPEIR 609 Query: 188 CHIVDSAHSFQSVATNILNIVW 209 H V + VA I+ + Sbjct: 610 IHNV--GRPPEEVADEIVAYLR 629 >gi|257076819|ref|ZP_05571180.1| signal recognition particle receptor FtsY [Ferroplasma acidarmanus fer1] Length = 311 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 18/139 (12%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV-LLSCGVD 60 I F GI G GKTT I L +L+ N V ++ T A A + +L+ V Sbjct: 113 KKPFVILFLGINGTGKTTTIGKLAYYLKSNNKSVVLSA--SDTFRAGAIDQLNILAGNVG 170 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + + F + + I A +L D R + LD Sbjct: 171 VEIIKHD---FRSDPASVAFDAIEHAKARKMDYVLID---------SAGRMQTNKNLLDE 218 Query: 120 LQEISVQEVMPDCTII-LD 137 +++I + PD TI+ LD Sbjct: 219 MKKI-KRVAKPDMTILVLD 236 >gi|86358496|ref|YP_470388.1| ABC transporter ATP-binding protein [Rhizobium etli CFN 42] gi|86282598|gb|ABC91661.1| probable ABC transporter, ATP-binding protein [Rhizobium etli CFN 42] Length = 353 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%) Query: 1 MN--SGLFISFEGIEGAGKTTHISLLK 25 MN G FISF G G GKTT + ++ Sbjct: 24 MNIEKGEFISFLGPSGCGKTTVLRMIA 50 >gi|78043241|ref|YP_359260.1| iron compound ABC transporter ATP-binding protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995356|gb|ABB14255.1| iron compound ABC transporter, ATP-binding protein [Carboxydothermus hydrogenoformans Z-2901] Length = 399 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 + G F G GAGKTT + +L L+ K V Sbjct: 25 HPGKFTVIIGPNGAGKTTLLKILAGLLKPKYGTV 58 >gi|50121814|ref|YP_050981.1| hypothetical protein ECA2890 [Pectobacterium atrosepticum SCRI1043] gi|49612340|emb|CAG75790.1| hypothetical protein ECA2890 [Pectobacterium atrosepticum SCRI1043] Length = 172 Score = 38.1 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 16/29 (55%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD 34 FI EG G+GKTT + L +L K D Sbjct: 25 FICIEGHTGSGKTTLGTSLSEYLNAKLID 53 >gi|330808248|ref|YP_004352710.1| Heme-transporting ATPase (cytochrome C biogenesis ATP-binding export protein) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376356|gb|AEA67706.1| Heme-transporting ATPase (cytochrome C biogenesis ATP-binding export protein) [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 179 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 4/85 (4%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV----DEFGA 64 G G+GKT+ + LL +Q V + +P + +E AR++L D Sbjct: 4 ISGPNGSGKTSLLRLLAGLMQPTAGQVLLNGQPLHSQRSELARNLLWIGHAAGIKDLLTP 63 Query: 65 EAEAIVFAAARLDHVENVIRPALME 89 E A I AL Sbjct: 64 EENLSWLCALHTPAGREAIWQALAA 88 >gi|320645358|gb|EFX14367.1| Thymidylate kinase [Escherichia coli O157:H- str. 493-89] gi|320650671|gb|EFX19128.1| Thymidylate kinase [Escherichia coli O157:H- str. H 2687] Length = 252 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G + GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDDTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPTLWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193 >gi|319891526|ref|YP_004148401.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus pseudintermedius HKU10-03] gi|317161222|gb|ADV04765.1| Deoxyadenosine kinase / Deoxyguanosine kinase [Staphylococcus pseudintermedius HKU10-03] Length = 221 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 28/176 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G GK++ + L + T + L +F + Sbjct: 12 ITIAGTVGVGKSSLTRAIAEKLNFR------------TSYENVEHNPYLDKFYHDFKRWS 59 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD-------SSYAYQGERDSSQHLFLDS 119 + + + R G + DR + + QG + Sbjct: 60 FHLQMY-FLAERFKEQKRMFEYGGGFV-QDRSIYEDVDIFAKMHVEQGTMTPEDFKTYSN 117 Query: 120 LQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHE 171 L E ++ PD I L+ + L+R+Q R E +Y+E ++ Sbjct: 118 LFEAMVLTPYFPKPDVLIYLESDYEAVLERIQARGRQMEIETDPEYWE---MLFQR 170 >gi|291284367|ref|YP_003501185.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615] gi|290764240|gb|ADD58201.1| Thymidylate kinase [Escherichia coli O55:H7 str. CB9615] gi|320656367|gb|EFX24274.1| Thymidylate kinase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661739|gb|EFX29147.1| Thymidylate kinase [Escherichia coli O55:H7 str. USDA 5905] gi|320666890|gb|EFX33866.1| Thymidylate kinase [Escherichia coli O157:H7 str. LSU-61] Length = 252 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 61/174 (35%), Gaps = 36/174 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ-----RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 I+ G + GK+T + L + LQ + Y ++ E G V L + Sbjct: 23 LIAVVGCDDTGKSTLTTDLVKSLQQHWQTERRYLGLLSGEDGDKIKRLPLVGVWLERRLA 82 Query: 61 EFGAEAEAIV--------------FAAARLDHVENVIRPALMEGKILLCDRF---LDSSY 103 ++ +++ F+ R+ ++ V R A G +++ DRF S + Sbjct: 83 AKSSKTQSMKTKSPALWAAVIMYCFSLRRMANLRKVQRLA-QSGVLVVSDRFPQAEISGF 141 Query: 104 AYQGERDSSQHL-----------FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 Y G + Q+++ P+ I L + ++ + R Sbjct: 142 YYDGPGIGVERATGKISMFLAQRERRLYQQMAQY--RPELIIRLGIDIETAISR 193 >gi|290561667|gb|ADD38233.1| Deoxynucleoside kinase [Lepeophtheirus salmonis] Length = 236 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 15/170 (8%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKN----YDVHVTREPGGTPAAEAARHVL-- 54 M + + EG +GKTT + L LQ V EP + ++L Sbjct: 1 MKNRFTVCVEGNIASGKTTFLKLFNSNLQFDKELPQVSCKVIEEPVPSWQNLCGHNILEM 60 Query: 55 LSCGVDEFGAEAEAIVFAAARLDH---VENVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 + +G ++ V H ++ I+ LME +L +R ++ G Sbjct: 61 MYKDPHRWGHLFQSYVTLTMTQAHTLQIKESIK--LMERSLLTAERCFAANLYCSGIMSK 118 Query: 112 SQHLFL-DSLQEISVQ---EVMPDCTIILDLPVDIGLKRVQNRYSLRESA 157 ++L L + ++ V D + L + KR +R ESA Sbjct: 119 PEYLVLKEWYAYLNSHPKINVSADLIVYLRTTPETCFKRTISRSRTEESA 168 >gi|261402771|ref|YP_003246995.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus vulcanius M7] gi|261369764|gb|ACX72513.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus vulcanius M7] Length = 251 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 57/197 (28%), Gaps = 45/197 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARH---VLLSCGVDE 61 + I G+ GK+T L L + DV V ++ R + Sbjct: 1 MLIILTGLPSVGKSTFSKKLAEILNKLGIDVIVL-------GSDMLRESFPAWRESYEEF 53 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 + I AL E ++ D D++Y Y R ++ + + Sbjct: 54 IRKNTLYL-------------IENALKE-YWVIVD---DTNY-YNSMRRDLINIAKKNEK 95 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 ++ I L P++ L+R R + + +K K R Sbjct: 96 NYAI--------IYLRAPLNTLLQRNVKRGEKIPNEVIVEMYKKFDEPGRKYR------- 140 Query: 182 RNQPDRCHIVDSAHSFQ 198 + VD+ Sbjct: 141 --WDEPFLTVDTTKEID 155 >gi|260942839|ref|XP_002615718.1| hypothetical protein CLUG_04599 [Clavispora lusitaniae ATCC 42720] gi|238851008|gb|EEQ40472.1| hypothetical protein CLUG_04599 [Clavispora lusitaniae ATCC 42720] Length = 215 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 21/45 (46%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 I+ GI GAGK+T + L + L +++ V + G E Sbjct: 26 LIAIAGIPGAGKSTLVERLAQELIQRDITCKVFPQDGYHYYREQL 70 >gi|224541971|ref|ZP_03682510.1| hypothetical protein CATMIT_01144 [Catenibacterium mitsuokai DSM 15897] gi|224525111|gb|EEF94216.1| hypothetical protein CATMIT_01144 [Catenibacterium mitsuokai DSM 15897] Length = 940 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 4 GLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G FI+ G+ G+GK+T ++ +L + L+ K V+ +RE G + R + Sbjct: 634 GKFIAVTGVSGSGKSTLVNDILCKALRAK---VYRSRELPGKH--KEIRGI 679 >gi|154253504|ref|YP_001414328.1| sulfate adenylyltransferase large subunit [Parvibaculum lavamentivorans DS-1] gi|154157454|gb|ABS64671.1| sulfate adenylyltransferase, large subunit [Parvibaculum lavamentivorans DS-1] Length = 639 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 17/74 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T L++ L K Y+V +L G A Sbjct: 473 FTGLSGAGKSTLAVALEKKLFEKGYNVF-----------------VLDGDNVRHGLNANL 515 Query: 69 IVFAAARLDHVENV 82 R +++ V Sbjct: 516 SFSPEDRAENIRRV 529 >gi|50913781|ref|YP_059753.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS10394] gi|94993818|ref|YP_601916.1| dephospho-CoA kinase [Streptococcus pyogenes MGAS10750] gi|50902855|gb|AAT86570.1| Dephospho-CoA kinase [Streptococcus pyogenes MGAS10394] gi|94547326|gb|ABF37372.1| Dephospho-CoA kinase [Streptococcus pyogenes MGAS10750] Length = 206 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 72/226 (31%), Gaps = 44/226 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH-----V 53 + I G +GK+T + ++ ++ Y V + G EA R + Sbjct: 10 MIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFGNQI 65 Query: 54 LLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGER 109 L + G + +E + + +I+ L + + + Sbjct: 66 LKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HLAQS 113 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMI 169 + + + L E+ Q+ D ++ + L+R+ R L + + Sbjct: 114 QAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ---- 168 Query: 170 HEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L I +P ++D+ +++ + + + L R Sbjct: 169 --------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 206 >gi|16125729|ref|NP_420293.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Caulobacter crescentus CB15] gi|221234486|ref|YP_002516922.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Caulobacter crescentus NA1000] gi|13422853|gb|AAK23461.1| sulfate adenylate transferase, subunit 1/adenylylsulfate kinase [Caulobacter crescentus CB15] gi|220963658|gb|ACL95014.1| sulfate adenylyltransferase subunit 1/adenylylsulfate kinase [Caulobacter crescentus NA1000] Length = 635 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 34/139 (24%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T +L+++ L + LL G + Sbjct: 467 GLSGAGKSTIANLVEKRLHALGRHTY-----------------LLDGDNVRHGLNKDLGF 509 Query: 71 FAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 R++ V V + + G I+L A+ + + L D L+ E Sbjct: 510 TEEDRVENIRRVAEVAKLMVDAGLIVLT--------AFISPFRAERQLARDLLE---PGE 558 Query: 128 VMPDCTIILDLPVDIGLKR 146 + +D P+ + R Sbjct: 559 F---IEVFVDTPLAVAEAR 574 >gi|77411950|ref|ZP_00788280.1| conserved hypothetical protein [Streptococcus agalactiae CJB111] gi|77161976|gb|EAO72957.1| conserved hypothetical protein [Streptococcus agalactiae CJB111] Length = 195 Score = 38.1 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 77/225 (34%), Gaps = 50/225 (22%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I+ +G GKTT + ++ K Y +P + L ++ Sbjct: 1 MIIAIQGGMAVGKTTALKII-----EKVYPKIAISFEDISPVVDKINKHQLD--NNKLDD 53 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCD----------RFLDSSYAYQGERDSSQH 114 E + H + + + +I+L D ++ Y S+ Sbjct: 54 YCEIQQLF---IQHERDRYE-LVRDNEIVLMDYGAEEIAFYTQYFPKVAGYSWTLPSNLL 109 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR- 173 L ++ L+E D I LD + +R +N ++ R + Sbjct: 110 LEVNRLKECFA-----DYIIFLDADKTVLYQRQKNDFNRRRH------------FFKWYT 152 Query: 174 ------RQIFLDIARNQPDRCHIVDSAH-SFQSVATNILNIVWEL 211 ++ +LD + H +++ H + + VA I++I+ +L Sbjct: 153 HHLLPAKKHYLD---TFSNVIH-INTNHLNAEEVAEKIIDIIRKL 193 >gi|328949164|ref|YP_004366501.1| sugar ABC transporter ATPase [Treponema succinifaciens DSM 2489] gi|328449488|gb|AEB15204.1| Monosaccharide-transporting ATPase [Treponema succinifaciens DSM 2489] Length = 705 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 19/35 (54%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 + G +I+ G+ G+GK+T L+ F + +V Sbjct: 29 SQGEYIAILGLNGSGKSTLARLIAGFFEPLKGEVI 63 Score = 35.0 bits (80), Expect = 7.6, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 16/41 (39%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 + G ++ G G GK+T L + + ++ P Sbjct: 270 LKKGTLVALTGPSGCGKSTLFECLAGLKKNQGGKIYALSRP 310 >gi|325970043|ref|YP_004246234.1| polyamine-transporting ATPase [Spirochaeta sp. Buddy] gi|324025281|gb|ADY12040.1| Polyamine-transporting ATPase [Spirochaeta sp. Buddy] Length = 375 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 G F++ G G GK+T + ++ FL+ +V + +P T R++ Sbjct: 42 GEFVTLIGPSGCGKSTTLRIIAGFLKPSGGEVLLEGKPI-THLGPQDRNI 90 >gi|323473907|gb|ADX84513.1| ABC transporter related protein [Sulfolobus islandicus REY15A] gi|323477060|gb|ADX82298.1| ABC transporter related protein [Sulfolobus islandicus HVE10/4] Length = 285 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVL 54 FI G GAGKTT I +L L++ V V E P P V+ Sbjct: 33 FI---GPNGAGKTTTIKILAGLLRKDGGKVKVFGEDPWDNPKVIEMISVI 79 >gi|258546171|ref|ZP_05706405.1| signal recognition particle-docking protein FtsY [Cardiobacterium hominis ATCC 15826] gi|258518596|gb|EEV87455.1| signal recognition particle-docking protein FtsY [Cardiobacterium hominis ATCC 15826] Length = 428 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 13/27 (48%), Positives = 17/27 (62%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37 GI GAGKTT I L R+ Q++ V + Sbjct: 232 GINGAGKTTTIGKLARYFQQEGKKVML 258 >gi|255326876|ref|ZP_05367952.1| polyphosphate kinase 2 [Rothia mucilaginosa ATCC 25296] gi|255296093|gb|EET75434.1| polyphosphate kinase 2 [Rothia mucilaginosa ATCC 25296] Length = 355 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 42/159 (26%), Gaps = 45/159 (28%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 I FEG + AGK I L + V +P + Sbjct: 127 LIIFEGRDAAGKGGSIKRFTEHLNPRGARVVALEKPTDIEQTQW---------------- 170 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + I+ G+I+L DR S Y G + E Sbjct: 171 ------------YFQRYIKHLPSGGEIVLMDR---SWYNRAGVERVMGYCTQAQYFEFMR 215 Query: 126 QEVMPDC------------TIILDLPVDIGLKRVQNRYS 152 + +PD + + L R +R + Sbjct: 216 E--VPDLERMLVNSGIHIIKFWFSVTREEQLARFTSRRT 252 >gi|254523215|ref|ZP_05135270.1| small GTP-binding domain protein [Stenotrophomonas sp. SKA14] gi|219720806|gb|EED39331.1| small GTP-binding domain protein [Stenotrophomonas sp. SKA14] Length = 173 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 9/107 (8%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK+T + L + V + V + G + + Sbjct: 2 GPLGAGKSTLVQTLT-----RGKAVVTEARNTDPAVGKQYTTVAMDYGDIDLPGGDRLRL 56 Query: 71 FAA--ARLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQ 113 + + I A EG I+L D +DS+ A Q R + Sbjct: 57 YGSPGQERFSYIWPILLAGAEGAIVLIDGSAGVDSTLAGQHLRAIAD 103 >gi|217977354|ref|YP_002361501.1| protein of unknown function DUF344 [Methylocella silvestris BL2] gi|217502730|gb|ACK50139.1| protein of unknown function DUF344 [Methylocella silvestris BL2] Length = 278 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 25/155 (16%), Positives = 45/155 (29%), Gaps = 43/155 (27%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG +GAGK I L + + + V P ++ L Sbjct: 56 IVFEGRDGAGKGGAIKALTERVSPRTFKVIALAAPTDREKSQMYIQRYL----------- 104 Query: 67 EAIVFAAARLDHVENVIRPAL-MEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 P L G++++ DR S Y G + ++ Sbjct: 105 ------------------PHLPAAGEVVIFDR---SWYNRAGVERVMGFCSDEHAEQFLT 143 Query: 126 QEVMPDCTI----------ILDLPVDIGLKRVQNR 150 + I L++ + +R+ +R Sbjct: 144 MTPAVEKAIIQSGVILLKYWLEVSPEEQTRRLSSR 178 >gi|182434720|ref|YP_001822439.1| putative ABC transporter ATP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326775237|ref|ZP_08234502.1| Taurine-transporting ATPase [Streptomyces cf. griseus XylebKG-1] gi|178463236|dbj|BAG17756.1| putative ABC transporter ATP-binding protein [Streptomyces griseus subsp. griseus NBRC 13350] gi|326655570|gb|EGE40416.1| Taurine-transporting ATPase [Streptomyces cf. griseus XylebKG-1] Length = 276 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--------------- 48 G FI+ G G GK+T + L+ L + +V + E P + Sbjct: 53 GEFIAIVGPSGCGKSTLLKLVAGLLTASSGEVLLGGERVTGPRHDIGYVFQRAALLEWRS 112 Query: 49 AARHVLLSCGVDEFGA 64 A R++LL + Sbjct: 113 ALRNILLQAEIRRLEP 128 >gi|170291208|ref|YP_001738024.1| ATPase [Candidatus Korarchaeum cryptofilum OPF8] gi|170175288|gb|ACB08341.1| AAA ATPase [Candidatus Korarchaeum cryptofilum OPF8] Length = 529 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 2/47 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 G+ I+ G GAGKTT S L F + + V P Sbjct: 252 GILIA--GPPGAGKTTFASALAEFYKERGRIVKTLESPRDLQVGPEI 296 >gi|153954424|ref|YP_001395189.1| hypothetical protein CKL_1799 [Clostridium kluyveri DSM 555] gi|229484853|sp|A5N960|CYSC_CLOK5 RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|146347305|gb|EDK33841.1| CysC [Clostridium kluyveri DSM 555] Length = 199 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 29/145 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+ I F G+ G+GK+T S L+ L + LL Sbjct: 26 QNGILIWFTGLSGSGKSTIASELEMRLYNMGRLTY-----------------LLDGDNVR 68 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + R++++ +C F+DS S D ++ Sbjct: 69 HGLNSNLGFTKEDRIENIRRTAE---------VCKLFVDSGIITISTFISPFKDDRDKVR 119 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 ++ ++ + + +D P+++ R Sbjct: 120 KLLGKDFVE---VYVDCPLEVCESR 141 >gi|116629415|ref|YP_814587.1| guanylate kinase [Lactobacillus gasseri ATCC 33323] gi|311110935|ref|ZP_07712332.1| guanylate kinase [Lactobacillus gasseri MV-22] gi|116094997|gb|ABJ60149.1| guanylate kinase [Lactobacillus gasseri ATCC 33323] gi|311066089|gb|EFQ46429.1| guanylate kinase [Lactobacillus gasseri MV-22] Length = 204 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 80/213 (37%), Gaps = 36/213 (16%) Query: 2 NSGLFISFEGIEGAGKTTH-ISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 + GL + G G GK T +++K+ Y V TR+P + + Sbjct: 3 HQGLLLVLSGPSGVGKGTVKSAMVKQKAFSFEYSVSMTTRKPRPGEVDGKDYYFVSEDRF 62 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + E + + +H + P L EGK +L + +D + A Q Sbjct: 63 QEAIKDNELLEYNEYVGNHYGTPLAPVQKMLKEGKDVLLE--IDVNGAKQ---------- 110 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI 176 V+++MPD I P D L +++R R + D +I + +Q Sbjct: 111 --------VRKLMPDGVFIFLTPPD--LHELKHRIVNRGTDS-------DKVIAMRMKQA 153 Query: 177 FLDIARNQPDRCHIVDSAHSFQSVATNILNIVW 209 +I + +V+ + +V +I +IV Sbjct: 154 RKEILMMEDYDYAVVN--DTVANVVDHIKSIVE 184 >gi|308799549|ref|XP_003074555.1| UMPK_ARATH Uridylate kinase (ISS) [Ostreococcus tauri] gi|116000726|emb|CAL50406.1| UMPK_ARATH Uridylate kinase (ISS) [Ostreococcus tauri] Length = 161 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 8/76 (10%) Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIARNQPDR 187 D + D P D+ R+ R R ++ +++ V E + + ++ Sbjct: 82 DFVLFFDCPEDVMTTRLLGRNEGRSDDNIETIKKRFVTFRESSLPVINYYEKL-----NK 136 Query: 188 CHIVDSAHSFQSVATN 203 V+S S + V Sbjct: 137 VCTVNSDQSPEDVYAQ 152 >gi|88604155|ref|YP_504333.1| ATPase [Methanospirillum hungatei JF-1] gi|88189617|gb|ABD42614.1| ATPase, PilT family [Methanospirillum hungatei JF-1] Length = 655 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 2/40 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 G+ I+ G G GKTT + +L + + +P Sbjct: 260 KPGILIT--GPPGCGKTTLAQAIATYLCDEGVIIKTMEQP 297 >gi|33866618|ref|NP_898177.1| adenylate kinase [Synechococcus sp. WH 8102] gi|46396094|sp|Q7U4I1|KAD_SYNPX RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|33633396|emb|CAE08601.1| Adenylate kinase [Synechococcus sp. WH 8102] Length = 183 Score = 38.1 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 44/217 (20%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M S L F G GAGK T + L T G +E A L + Sbjct: 1 MKSRLL--FLGPPGAGKGTQAARLC---NANGMSHLST---GDLLRSEVAAGTALGQEAE 52 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E + + A + + L G LL G + D+L Sbjct: 53 AVMNRGE--LVSDALVLAIVESQLKGLSSGGWLL-----------DGFPRTVPQA--DAL 97 Query: 121 QEISVQEVMP-DCTIILDLPVDIGLKRVQNRYSLRESACL--DYFE--RKD----VMIHE 171 + + + P + ++L+L + ++R+ R ++ + + E R+ + + Sbjct: 98 EPLLDELKQPIEAVVLLELDDAVLIERLLARGRDDDNEAVIRNRLEVYREKTSPLISFYR 157 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 V++ S + + I ++ Sbjct: 158 ------------DKGLLVSVEANGSVEEITQRITKVL 182 >gi|323698824|ref|ZP_08110736.1| ABC transporter related protein [Desulfovibrio sp. ND132] gi|323458756|gb|EGB14621.1| ABC transporter related protein [Desulfovibrio desulfuricans ND132] Length = 447 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 53/160 (33%), Gaps = 22/160 (13%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 EG G+GK+T +L FL + +P ++L + + Sbjct: 264 VEGGNGSGKSTLTRILAGFLAPDAGTATLFDQPVAPARLRGRVGLVLQSPSSQLFEDTVL 323 Query: 69 --IVFAAARLDHVENVIRPALMEGKILLC---DR--FLDSSYAYQGERDSSQHLFLDSLQ 121 + +AA R + R + + DR FL S Y +R ++ L Sbjct: 324 RELAYAARRKGLDDPEGRARCAAKALGISDLLDRAPFLLS---YGQQRLTALGACLTQ-- 378 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 PD ++LD GL R + R + + Sbjct: 379 -------EPDL-LLLD-DPFAGLDR-EARERVHGVLDAER 408 >gi|319899078|ref|YP_004159171.1| adenylate kinase [Bartonella clarridgeiae 73] gi|319403042|emb|CBI76597.1| adenylate kinase [Bartonella clarridgeiae 73] Length = 197 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 44/226 (19%), Positives = 74/226 (32%), Gaps = 57/226 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T +L + R V++ E E Sbjct: 7 GPPGAGKGTQAKILTEE-----------YNIPQLSTGDMLRVVIMK--------ETE--- 44 Query: 71 FAAARLDHVENVIRPALMEGKIL--------LCDRFLDSSYAYQGERDSSQHLFL--DSL 120 V + + + G ++ + DR +S A D + ++L Sbjct: 45 --------VGKIAKAVMESGSLVSDNIVNQIVSDRISESDCANGFILDGYPRTVVQAEAL 96 Query: 121 QEI-SVQEVMPDCTIILDLPVDIGLKRVQNR--------YSLRESACLDYFERKDVMIHE 171 Q+I + D I L + D ++R++ R +R D F ++ V E Sbjct: 97 QQILKSKNEQLDAVIELVVDEDALIERMKKRVQDTIVSGGQVRSDDNPDAFAKRLVEYRE 156 Query: 172 K---RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 K + +LDI VD +F V+ I N + + QK Sbjct: 157 KTAPVSKFYLDI-----GLLKTVDGMANFSDVSRAIKNSLEGVFQK 197 >gi|315930417|gb|EFV09487.1| Polyphosphate kinase [Campylobacter jejuni subsp. jejuni 305] Length = 176 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%) Query: 3 SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 GL I EG + AGK I L L + V +P + Sbjct: 52 KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + + I G+I++ DR Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123 >gi|308061949|gb|ADO03837.1| adenylate kinase [Helicobacter pylori Cuz20] Length = 191 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 71/219 (32%), Gaps = 38/219 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M I G G+GKTT L+ + + T + +A+ LL ++ Sbjct: 1 MKQLFLII--GAPGSGKTTDAELIAKN-NSEKIAHFSTGDLLRAESAKKTERGLL---IE 54 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM--EGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +F ++ E + L+ V I A+ I+L D + S Q Sbjct: 55 KFTSQGELVP-----LEIVVETILSAIKSSSKGIILIDGYPRSVEQMQALNKELSAQ--- 106 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 E+ ++ V + V + + R R D +V+ H + R +FL Sbjct: 107 --NEVVLKSV---------IEVGVSENTAKERVLGRSRGADD----NEVVFHNRMR-VFL 150 Query: 179 D-IAR-----NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D + ++ S + + + + Sbjct: 151 DPLGEIQNFYKNKKVYKAINGERSIEEIVHEMQEYILSF 189 >gi|297661749|ref|XP_002809386.1| PREDICTED: guanylate kinase-like isoform 1 [Pongo abelii] Length = 218 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 67/223 (30%), Gaps = 41/223 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M+ + G GAGK+T + L + + V H TR P G Sbjct: 22 MSGPRPVVLSGPSGAGKSTLLKRLFQEHSGIFGFSVSHTTRNPR--------------PG 67 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + R + I A G + + S A Q + ++ LD Sbjct: 68 EENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNL-----YGTSKAAVQAVQAMNRICVLD 122 Query: 119 S----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 ++ I ++ P I + + + +R++ R + E + + Sbjct: 123 VDLQGVRNIKATDLRP---IYISVQPPSLHVLEQRLRRRNTETEESLAKRLAAAQADME- 178 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + +P +V S + + E ++K Sbjct: 179 ---------SSKEPGLFDVVIVNDSLDQAYAELKEALSEEIKK 212 >gi|265753978|ref|ZP_06089333.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263235692|gb|EEZ21216.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 181 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 79/221 (35%), Gaps = 41/221 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 MN G I G G GKTT S++ + + VH+ + ++ A L + Sbjct: 1 MNQGRIIVITGSPGTGKTTTASIVAKE-SNMDKSVHMHTDDFFHYLSKGAIPPHLPESNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + EA + AA R G ++ D FL+ Sbjct: 60 QNLVVIEAFLEAAKRYA----------RGGYDVIVD-------------GIVGPWFLEPW 96 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + + ++ I+L + +KR R + LD + +V + E + F ++ Sbjct: 97 RALVREDYEVHY-IVLRASKEETMKRAVER------SKLDR--KTNVELVETMWEQFCNL 147 Query: 181 ARNQPDRCHIVDSAH-SFQSVATNILNIVWELVQKRVSPLS 220 + + +VD+ + S ++ V E + R + LS Sbjct: 148 GIYESN---VVDTTNYSI----QETVSAVQEKIASRAALLS 181 >gi|290961859|ref|YP_003493041.1| guanylate kinase [Streptomyces scabiei 87.22] gi|260651385|emb|CBG74507.1| putative guanylate kinase [Streptomyces scabiei 87.22] Length = 197 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 49/212 (23%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHV-----TREPGGTPAAEAARHVLLSCGVDEF 62 G G GK+T ++ +++ + +V + TR+P + +D+ Sbjct: 21 VLSGPSGVGKSTVVA----HMRKAHPEVWLSVSATTRKPRPGERNGVHYFFVTDEEMDKL 76 Query: 63 GAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 A E + FA R + L +G+ +L + QG R Sbjct: 77 IANGELLEWAEFAGNRYGTPRAAVLERLEKGEPVLLE------IDLQGARQ--------- 121 Query: 120 LQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 V+E MPD ++ P D ++R+ R + E + + Sbjct: 122 -----VRETMPDAQLVFLAPPSWDELVRRLTGRGTEPPEVIERRLEAAKIEL-------- 168 Query: 178 LDIARNQPD-RCHIVDSAHSFQSVATNILNIV 208 +P+ +V++ S + VA +L +V Sbjct: 169 ----AAEPEFDVTLVNT--SVEDVARELLALV 194 >gi|229583997|ref|YP_002842498.1| ABC transporter related [Sulfolobus islandicus M.16.27] gi|238618939|ref|YP_002913764.1| ABC transporter related [Sulfolobus islandicus M.16.4] gi|228019046|gb|ACP54453.1| ABC transporter related [Sulfolobus islandicus M.16.27] gi|238380008|gb|ACR41096.1| ABC transporter related [Sulfolobus islandicus M.16.4] Length = 285 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 4/50 (8%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE-PGGTPAAEAARHVL 54 FI G GAGKTT I +L L++ V V E P P V+ Sbjct: 33 FI---GPNGAGKTTTIKILAGLLRKDGGKVKVFGEDPWDNPKVIEMISVI 79 >gi|227893199|ref|ZP_04011004.1| excinuclease subunit A [Lactobacillus ultunensis DSM 16047] gi|227864968|gb|EEJ72389.1| excinuclease subunit A [Lactobacillus ultunensis DSM 16047] Length = 967 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%) Query: 4 GLFISFEGIEGAGKTTHISL-LKRFLQRK 31 G FI G+ G+GK+T +++ LKR L +K Sbjct: 649 GKFIVVTGVSGSGKSTLVNMILKRALAQK 677 >gi|242015714|ref|XP_002428492.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212513126|gb|EEB15754.1| conserved hypothetical protein [Pediculus humanus corporis] Length = 311 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Query: 1 MNSGLF--ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M+ +F I G G+GKTT+ +K+ L+ + V V Sbjct: 1 MSKYMFGQIVI-GPPGSGKTTYCYEMKKLLKELDRKVIVV 39 >gi|168027539|ref|XP_001766287.1| predicted protein [Physcomitrella patens subsp. patens] gi|162682501|gb|EDQ68919.1| predicted protein [Physcomitrella patens subsp. patens] Length = 249 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 60/202 (29%), Gaps = 41/202 (20%) Query: 11 GIEGAGKTTHISLLKR-----FLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G G+GK T + + L D+ G ++++ + Sbjct: 47 GGPGSGKGTQCAKIVDTFGFVHLSAG--DLLRAEINSGNENGTMIQNMIKEGKIVP---- 100 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + ++ A+ E D+FL + R+ D + Sbjct: 101 ----------AEVTVKLLEKAMKESD---NDKFLIDGF----PRNLDNRKCFDEVT---- 139 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK---RRQIFLDIAR 182 + P + D P D +R+ R R ++ ++ + + + + Sbjct: 140 -GIEPQFILFFDCPEDEMERRLLGRNQGRVDDNIETIRKRFKVFIDSSLPVVGHYEEC-- 196 Query: 183 NQPDRCHIVDSAHSFQSVATNI 204 + H +D+ + V +I Sbjct: 197 ---GKVHKIDATKTPSEVFESI 215 >gi|297584357|ref|YP_003700137.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10] gi|297142814|gb|ADH99571.1| deoxynucleoside kinase [Bacillus selenitireducens MLS10] Length = 228 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 53/167 (31%), Gaps = 30/167 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGA 64 I+ G G GK+T ++L L TPA E + L D+F Sbjct: 14 LITLAGTVGVGKSTLTTVLSDALA-------------FTPAFEKVDGNPYLEDYYDDFQK 60 Query: 65 EAEAI--VFAAARLDHVENVIRPALMEGKILLCDRFLD------SSYAY-QGERDSSQHL 115 + + F A R + + + DR + + Y QG Sbjct: 61 WSFHLQMYFLAERF----KQQKTMHEQNIGYVQDRSIYEDVGIFAQLQYDQGNMTQRDFN 116 Query: 116 FLDSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 SL E ++ PD I +D + + R+Q R E Sbjct: 117 TYHSLFEAMVMNPYFPKPDVLIFIDGRFESIMDRIQKRGREMEVNTP 163 >gi|115315294|ref|YP_764017.1| signal recognition particle receptor FtsY [Francisella tularensis subsp. holarctica OSU18] gi|167009994|ref|ZP_02274925.1| signal recognition particle receptor FtsY [Francisella tularensis subsp. holarctica FSC200] gi|169656723|ref|YP_001429185.2| signal recognition particle-docking protein FtsY [Francisella tularensis subsp. holarctica FTNF002-00] gi|254368195|ref|ZP_04984215.1| signal recognition particle receptor ftsY [Francisella tularensis subsp. holarctica 257] gi|115130193|gb|ABI83380.1| signal recognition particle receptor FtsY [Francisella tularensis subsp. holarctica OSU18] gi|134254005|gb|EBA53099.1| signal recognition particle receptor ftsY [Francisella tularensis subsp. holarctica 257] gi|164551791|gb|ABU62229.2| signal recognition particle-docking protein FtsY [Francisella tularensis subsp. holarctica FTNF002-00] Length = 343 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 G+ G GKTT I L + LQ + V + AA E R + E Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 202 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCD 96 A + N I A +G +++ D Sbjct: 203 --GADSASVIYNAIGSAKSKGIDVVIAD 228 >gi|110802928|ref|YP_697412.1| deoxynucleoside kinase family protein [Clostridium perfringens SM101] gi|110683429|gb|ABG86799.1| deoxyguanosine kinase/deoxyadenosine kinase [Clostridium perfringens SM101] Length = 203 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 37/218 (16%) Query: 17 KTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VFAAA 74 K+T +++L + EP + +L + + + F Sbjct: 12 KSTLMNILAER------GLIAYEEP-------VVDNPILEKFYYDRNRYSFPLQVFFLNK 58 Query: 75 RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-------LQEISVQE 127 R H++ L+E + DR + + + ++ L+ + Sbjct: 59 RFKHIKEA---GLVENS--VMDRSIYGDVIFAKMLCEKGEMTVEEFELYKELLENMLEHV 113 Query: 128 VMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP-D 186 P + L++ VD +KR+Q R E ER+ EK + + N Sbjct: 114 KAPKLMVYLEISVDEAMKRIQKRGRDYEQVV----ERE---YWEKLNNEYREYFENYNVS 166 Query: 187 RCHIVDSA-HSFQSVATNILNIVWELVQKRVSPLSSKK 223 ++ F+++ + V L+ +++S L + K Sbjct: 167 PILRINVDELDFENIPED-REYVLNLIDEKLSELENNK 203 >gi|115452899|ref|NP_001050050.1| Os03g0337700 [Oryza sativa Japonica Group] gi|108708035|gb|ABF95830.1| expressed protein [Oryza sativa Japonica Group] gi|113548521|dbj|BAF11964.1| Os03g0337700 [Oryza sativa Japonica Group] Length = 265 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 12/99 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVT-----REPGGTPAAEAARHVL-LSCGVDEFGA 64 G G+GK+T+ S L + + +H+ E P + R ++ L ++E G Sbjct: 9 GPAGSGKSTYCSSLYQHCETVGRTIHMVNLDPAAEHFSYPVSTDIRELISLDDVMEELGM 68 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY 103 + ++H+E+ + L E D +LD Y Sbjct: 69 GPNGGLIYC--MEHLEDNLDDWLDEQ----LDGYLDDDY 101 >gi|89054441|ref|YP_509892.1| ABC transporter related [Jannaschia sp. CCS1] gi|88863990|gb|ABD54867.1| sucrose ABC transporter ATP-binding protein / maltose ABC transporter ATP-binding protein / trehalose ABC transporter ATP-binding protein [Jannaschia sp. CCS1] Length = 377 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 6/93 (6%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN------YDVHVTREPGGTPAAEAARHVLLS 56 G I F G G GK+T + ++ + DV P A + L Sbjct: 29 QGELIVFVGPSGCGKSTLLRMIAGLEKITGGELVIDNDVVNDVPPSERGIAMVFQSYALY 88 Query: 57 CGVDEFGAEAEAIVFAAARLDHVENVIRPALME 89 + A A+ A ++ + A + Sbjct: 89 PHMTVRDNMAFALKIAGDDAATIDKKVNAAAAK 121 >gi|306827855|ref|ZP_07461124.1| dephospho-CoA kinase [Streptococcus pyogenes ATCC 10782] gi|304429964|gb|EFM33004.1| dephospho-CoA kinase [Streptococcus pyogenes ATCC 10782] Length = 203 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52 + I G +GK+T + ++ ++ Y V + G EA R Sbjct: 4 KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 59 Query: 53 --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106 +L + G + +E + + +I+ L + + Sbjct: 60 NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 107 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + + + + L E+ Q+ D ++ + L+R+ R L + + Sbjct: 108 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 165 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L I +P ++D+ +++ + + + L R Sbjct: 166 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANSR 203 >gi|297569062|ref|YP_003690406.1| hypothetical protein DaAHT2_1089 [Desulfurivibrio alkaliphilus AHT2] gi|296924977|gb|ADH85787.1| hypothetical protein DaAHT2_1089 [Desulfurivibrio alkaliphilus AHT2] Length = 250 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 23/52 (44%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G G GKTT + L++ L R+ V R E R LLS ++ + Sbjct: 8 GPPGVGKTTVMGALQQALLRQGRAVLSARWVPLVVKQEQQRAGLLSRRLESW 59 >gi|224007723|ref|XP_002292821.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971683|gb|EED90017.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 907 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G+ + FEG++ +GK++ L++ L++ Y V R+ P AE L +D F Sbjct: 527 KGVILYFEGLDCSGKSSTGGLVQAALEQAGYAVG-MRQYNRPPTAEQR----LRPWMDRF 581 Query: 63 GAEAEA 68 EA Sbjct: 582 DTPGEA 587 >gi|209964748|ref|YP_002297663.1| ABC transporter, ATP-binding protein, putative [Rhodospirillum centenum SW] gi|209958214|gb|ACI98850.1| ABC transporter, ATP-binding protein, putative [Rhodospirillum centenum SW] Length = 261 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 19/45 (42%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA 47 G F+S G G GK+T + L+ L VH + PG Sbjct: 34 RGEFVSLLGSSGCGKSTLLRLIAGLLPPTAGGVHWSAPPGPGDIG 78 >gi|208779347|ref|ZP_03246693.1| cytidylate kinase [Francisella novicida FTG] gi|208745147|gb|EDZ91445.1| cytidylate kinase [Francisella novicida FTG] Length = 221 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 75/242 (30%), Gaps = 57/242 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF----LQRKN----YDVHVTREPGGT-----PAA 47 MN+ I+ +G G GK T L ++ L + Sbjct: 1 MNNSKIITIDGPSGVGKGTLAKALAKYYDFKLLDSGAIYRLAALHCFKNNANLENEDDVC 60 Query: 48 EAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQG 107 + R++ +S ++ +A + + L AY Sbjct: 61 KTLRNLDISFKIE--DDLVKAFLSNQDVTKDIRTEQIGMLAS-----------KVAAY-- 105 Query: 108 ERDSSQHLFLDSLQEISV-QEVMPD------CTI-------ILDLPVDIGLKRVQNRYSL 153 + + + L+ +E + Q ++ D LD +I KR N Sbjct: 106 --PTVRAILLNKQREFATEQGLVADGRDMGTVVFPQAQYKFFLDASTEITAKRRYNELKT 163 Query: 154 RESACLDYFER-----KDVMIHEKRRQIFLDIARNQP-DRCHIVDSAH-SFQSVATNILN 206 + FE+ K ++ R +A +P D IVD++ S + V +++ Sbjct: 164 KGQKPN--FEKILADIKQRDFQDRNR----KVAPLRPADDAIIVDTSQLSIKEVFDSVIK 217 Query: 207 IV 208 + Sbjct: 218 KI 219 >gi|78063148|ref|YP_373056.1| hypothetical protein Bcep18194_B2301 [Burkholderia sp. 383] gi|77971033|gb|ABB12412.1| hypothetical protein Bcep18194_B2301 [Burkholderia sp. 383] Length = 204 Score = 38.1 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 62/216 (28%), Gaps = 40/216 (18%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGKTT +L+ L + DV AE R AE Sbjct: 16 GPGGAGKTTAGALVAARLNWRFVDVDQCFLATHGNIAEFIRD----------RGYAEYAS 65 Query: 71 FAAARLDHVENVIRP----ALMEGKILLCDRFLDSSY-AYQGERDSSQHLFLDSLQEISV 125 + +E + A+ G +L + D Y R + +L Sbjct: 66 HNVGLYEQLERDMSVPTICAVSSGFML----YPDDVAPTYPALRRGIEADGFTAL----- 116 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQP 185 +L L+R R+ + Y + K R F R Sbjct: 117 ---------LL---PSFDLERCAKVIVGRQMSRP-YLNANEADEMRKIRDRFPAFMRLNC 163 Query: 186 DRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSS 221 R +S + VA +I + + R+ + Sbjct: 164 KRF---ESDGPPEQVAADIERFIVASMPSRIRSRAG 196 >gi|325858425|ref|ZP_08172587.1| dephospho-CoA kinase [Prevotella denticola CRIS 18C-A] gi|325483063|gb|EGC86051.1| dephospho-CoA kinase [Prevotella denticola CRIS 18C-A] Length = 187 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 21/167 (12%) Query: 5 LFISFEGIEGAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCG 58 + ++ G G+GK+ LL ++ T P E + G Sbjct: 1 MIVALTGGIGSGKSYVCRLLAERGIAVYDCDAHAKELMRTSPPLRQQLKELVGDSVFRNG 60 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 + + AE ++ + + V VI PA + CD F S ++ F Sbjct: 61 ILQKSVLAEFLLRSDRHVQAVNAVIHPA------VACD-FEQSGLSWLESAILFDSGFDR 113 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 D + + P ++ ++RV R + L++ R+ Sbjct: 114 RTHI--------DKVVCVTAPAEVRIRRVMERDGISREKALEWMARQ 152 >gi|260461049|ref|ZP_05809298.1| putative fructose transport system kinase [Mesorhizobium opportunistum WSM2075] gi|259033083|gb|EEW34345.1| putative fructose transport system kinase [Mesorhizobium opportunistum WSM2075] Length = 203 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 58/169 (34%), Gaps = 20/169 (11%) Query: 2 NSGLFIS-FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 + FI G GAGK+T + L L +V AR + G Sbjct: 17 KAKRFIVAIAGPPGAGKSTLSASLHDLLPEGAVEVVPMDGFHYDDIVLNARGLRARKGAP 76 Query: 61 EFGAEA--EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 E A EA++ IR E I + DR L+ S A + L Sbjct: 77 ETFDFAGFEALL----------KRIRAGEAEIAIPVFDRGLELSRAAAAIVGTETKFILV 126 Query: 119 SLQEISVQE-----VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLD 160 + + E + P D +I +D+P + +R+ R+ + D Sbjct: 127 EGNYLLLDEEPWSRLAPLFDYSIFVDVPRNELERRLMERWHEHGRSDAD 175 >gi|256060020|ref|ZP_05450202.1| ABC transporter related protein [Brucella neotomae 5K33] gi|261323997|ref|ZP_05963194.1| ABC transporter [Brucella neotomae 5K33] gi|261299977|gb|EEY03474.1| ABC transporter [Brucella neotomae 5K33] Length = 264 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 8/82 (9%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK-RFLQRKNYDVH----VTREPGGTPAAEAARHVLL 55 MN G F++ G GAGK+T + +L + + V VTR A AR V Sbjct: 29 MNKGSFVTVIGSNGAGKSTMLGVLAGDVIPTRGKVVIAGQDVTRNSTADRAGLVAR-VFQ 87 Query: 56 SCGVDEFGAEA--EAIVFAAAR 75 G E + AA+R Sbjct: 88 DPLAGSCGTLTIEENLALAASR 109 >gi|296141267|ref|YP_003648510.1| sulfate adenylyltransferase, large subunit [Tsukamurella paurometabola DSM 20162] gi|296029401|gb|ADG80171.1| sulfate adenylyltransferase, large subunit [Tsukamurella paurometabola DSM 20162] Length = 617 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ +GK+T + ++R L + + L G A+ Sbjct: 444 GLSASGKSTVAAEVERILVARGIPAYR-----------------LDGDNLRHGLNADLGF 486 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 AA R ++V V A+ + LL D + A + + + +E + Sbjct: 487 SAADRAENVRRV--GAVAQ---LLADAGTVAVAALISPYRADREKIRRAHEEAGLPFFE- 540 Query: 131 DCTIILDLPVDIGLKR 146 + +D P++ +R Sbjct: 541 ---VYIDTPLEQCERR 553 >gi|227537202|ref|ZP_03967251.1| possible deoxyguanosine kinase [Sphingobacterium spiritivorum ATCC 33300] gi|227242917|gb|EEI92932.1| possible deoxyguanosine kinase [Sphingobacterium spiritivorum ATCC 33300] Length = 204 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 57/171 (33%), Gaps = 35/171 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I+ G GAGKTT LL + P EA + L + Sbjct: 3 IAIVGNIGAGKTTLTQLLANHFK-------------YEPQFEAVDNNPYLEDFYADMKRW 49 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY--------QGERDSSQ 113 A + F +R H+ + +G ++ DR + D AY G Sbjct: 50 AFNLQIFFLNSRFRHIVQLQ----EKGIDMIQDRTIYED---AYIFAENLFDMGLMSERD 102 Query: 114 HLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF 162 ++ + + + PD I L V + +Q R ESA LDY Sbjct: 103 FENYSNIFQSIIHYIKPPDLLIYLKASVPTLVNNIQRRGRDYESAIRLDYL 153 >gi|169629547|ref|YP_001703196.1| putative sulfate ABC transporter, ATP-binding protein [Mycobacterium abscessus ATCC 19977] gi|169241514|emb|CAM62542.1| Putative sulfate ABC transporter, ATP-binding protein [Mycobacterium abscessus] Length = 215 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 29/75 (38%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M +G F++ G G+GK+T + +L + V + G + LL + Sbjct: 1 MATGEFLAILGPSGSGKSTLLRVLAGLEELSAGAVVWASDEGRPRTGVVFQDALLMPWLT 60 Query: 61 EFGAEAEAIVFAAAR 75 A A F A R Sbjct: 61 VAENIAFAKRFGAHR 75 >gi|159484978|ref|XP_001700526.1| adenylate kinase 3 [Chlamydomonas reinhardtii] gi|158272166|gb|EDO97970.1| adenylate kinase 3 [Chlamydomonas reinhardtii] Length = 264 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 70/233 (30%), Gaps = 60/233 (25%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G AGK T + + + + V + R + + A+ Sbjct: 41 GAPAAGKGTQCAKIVDKYKLVHISV-----------GDILRDEVKNGTPAGKKAKD---- 85 Query: 71 FAAARL-----DHVENVIRPALMEGKIL----LCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 R + V +++ L E + L D + S A Q + Sbjct: 86 -FMDRGVLVPDEVVVEMVKLRLAEDDVKQRGWLLDGYPRS--ASQA-------------E 129 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------------DYFERKDVM 168 I + + PD +++++P ++ ++RV R ++ + ++ Sbjct: 130 AIEKEGIRPDVFLLINVPDELLVERVVGRRLDPQTGAIYHLKYSPPPADIVSRLIQRSDD 189 Query: 169 IHEKRR-------QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 +K R + D +D S Q V I + E V K Sbjct: 190 TEDKCRVRVATHNANVDAVVGYYKDVKVDIDGTQSMQDVFEAICTALDETVAK 242 >gi|125718412|ref|YP_001035545.1| dephospho-CoA kinase [Streptococcus sanguinis SK36] gi|125498329|gb|ABN44995.1| Dephospho-CoA kinase, putative [Streptococcus sanguinis SK36] Length = 198 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 76/224 (33%), Gaps = 50/224 (22%) Query: 11 GIEG---AGKTTHISLLKRFLQRKNYD-------VHVTREPGGTPAAEAARH---VLLSC 57 GI G +GK+T FL+++ Y VH +EPGG +L Sbjct: 6 GITGGIASGKSTVT----EFLRQQGYQVIDADQVVHELQEPGGRLYQALLSAFGPAILQE 61 Query: 58 GVDEFGAEAEAIVF-----AAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSS 112 + A++F A +IR L + LL + + A Sbjct: 62 DGRLDRPKLGAMIFGDPELLAQSSQIQNQIIREELAGRRDLLAE-----TQA--VFFMDL 114 Query: 113 QHLFLDSLQEISVQEVMPDCTIIL-DLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHE 171 LF ++ Q I L D+ V+ L R+ R +L + + + E Sbjct: 115 PLLFELQYEDWFDQ-------IWLVDVTVETQLSRLMTRNTLSQEEAEKRI-AAQLSLQE 166 Query: 172 KRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 K A ++D+ S + I + + + +++R Sbjct: 167 K-----RKRAD------VLIDNNGSLEETRQQIRDAL-QKLERR 198 >gi|73670926|ref|YP_306941.1| ATPase [Methanosarcina barkeri str. Fusaro] gi|72398088|gb|AAZ72361.1| ATPase, PilT family [Methanosarcina barkeri str. Fusaro] Length = 640 Score = 38.1 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 4/70 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+ G GAGK+T + + R+L V P S Sbjct: 269 QRGILIA--GPPGAGKSTFAAGVARYLNDHGQVVKTMESPRDLQVPPEITQY--SPLNGR 324 Query: 62 FGAEAEAIVF 71 A+ ++ Sbjct: 325 MENTADLLLL 334 >gi|329295533|ref|ZP_08252869.1| spermidine/putrescine ABC transporter ATPase subunit [Plautia stali symbiont] Length = 347 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 22/40 (55%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 ++ G FI+ G G GKTT ++L+ F + ++ + E Sbjct: 46 IHEGEFITLLGPSGCGKTTLLNLMAGFAEADGGEIFIDGE 85 >gi|302380963|ref|ZP_07269424.1| polyphosphate:nucleotide phosphotransferase, PPK2 family [Finegoldia magna ACS-171-V-Col3] gi|302311184|gb|EFK93204.1| polyphosphate:nucleotide phosphotransferase, PPK2 family [Finegoldia magna ACS-171-V-Col3] Length = 287 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 31/202 (15%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ + + ++ AGK + + + L V ++P E H L Sbjct: 56 KRGILVVLQAMDAAGKDSLVKKVFTALNPAGCKVTSFKQPST----EELDHDYLWRITKA 111 Query: 62 FGAEAEAIVFAAARLD-----HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 A E +F + + V N++ + RF D + A++ D++ Sbjct: 112 TPAYGEVGIFNRSHYEDVLVTRVHNLVNKKNDDDFW--EKRFEDIN-AFEKYLDNNGIKV 168 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRES----ACLDYFERKDVMIHEK 172 + L + D +R+ +R +L E A D ER++ + + Sbjct: 169 VK---------------FFLHVSKDEQKERLLDRINLEEKHWKFAASDILERENWDDYHR 213 Query: 173 RRQIFLDIARNQPDRCHIVDSA 194 + L+ ++V + Sbjct: 214 AYEDMLEHTSTDYAPWYVVPAD 235 >gi|257877364|ref|ZP_05657017.1| transcriptional regulator [Enterococcus casseliflavus EC20] gi|257811530|gb|EEV40350.1| transcriptional regulator [Enterococcus casseliflavus EC20] Length = 338 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 64/169 (37%), Gaps = 22/169 (13%) Query: 20 HISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE--FGAEAEAIVFAAARLD 77 +L+ L+++ Y + + + +L+ VD E+ A + Sbjct: 79 LAKVLEDLLRKQGYLLILVNSDDKADVEKELMQLLIDRNVDALIIALSTES---YADEVQ 135 Query: 78 HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM------PD 131 E + + ++ I+L DR +D+ Q ++ ++ + + I PD Sbjct: 136 TKERLKKLSV---PIVLVDRGIDNFEVDQVFYNNRHGGYIAACELIKKGHKKIGTMMNPD 192 Query: 132 CTI--------ILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK 172 I LD + GL+R + + + + D +E+ D+++ + Sbjct: 193 KNINCVYRYQGYLDALKEFGLQRKDSWHVVTKFQFEDAYEKADILLKNR 241 >gi|294930833|ref|XP_002779698.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983] gi|239889164|gb|EER11493.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983] Length = 244 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 11/77 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G G+GK+ +L L T+ + R + L + Sbjct: 24 ITIDGPAGSGKSVVAEMLADSLSG------FTK----LDSGALYRSIALFVNEGDIKGGI 73 Query: 67 EAIVFAAARLDHVENVI 83 E++ + A R +E VI Sbjct: 74 ESLAYEAFRA-LLEQVI 89 >gi|256828736|ref|YP_003157464.1| Cobyrinic acid ac-diamide synthase [Desulfomicrobium baculatum DSM 4028] gi|256577912|gb|ACU89048.1| Cobyrinic acid ac-diamide synthase [Desulfomicrobium baculatum DSM 4028] Length = 258 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA 49 I+F G G GKTT + L +L R+ +DV + +A Sbjct: 3 IAFAGKGGVGKTTLCAWLGDYLARQGHDVLLVDADTALSLGQA 45 >gi|289809836|ref|ZP_06540465.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 64 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61 >gi|213854655|ref|ZP_03382895.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 110 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61 >gi|78049001|ref|YP_365176.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037431|emb|CAJ25176.1| ATP sulfurylase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 658 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+ + L Y +L G + Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R G I+L S + D + + Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + +D+P+ + R Sbjct: 590 --------VFVDVPLAVAEAR 602 >gi|55821057|ref|YP_139499.1| iron compound ABC uptake transporter ATP-binding protein [Streptococcus thermophilus LMG 18311] gi|55822978|ref|YP_141419.1| ferrichrome ABC transporter ATP-binding protein [Streptococcus thermophilus CNRZ1066] gi|116627812|ref|YP_820431.1| ABC-type spermidine/putrescine transport system, ATPase component [Streptococcus thermophilus LMD-9] gi|55737042|gb|AAV60684.1| iron compound ABC uptake transporter ATP-binding protein [Streptococcus thermophilus LMG 18311] gi|55738963|gb|AAV62604.1| ferrichrome ABC transporter, ATP-binding protein [Streptococcus thermophilus CNRZ1066] gi|116101089|gb|ABJ66235.1| ABC-type spermidine/putrescine transport system, ATPase component [Streptococcus thermophilus LMD-9] Length = 251 Score = 38.1 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHV 53 ++ G F +F G GAGK+T +SL+ R L + K Y +E + A+ + Sbjct: 24 IDKGKFTAFIGPNGAGKSTLLSLISRLLPKEKGYLYIKGQEIESWDSLNLAKEL 77 >gi|325921575|ref|ZP_08183421.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate kinase RaxQ [Xanthomonas gardneri ATCC 19865] gi|325547947|gb|EGD18955.1| Bifunctional sulfate adenylyltransferase subunit 1/ adenylylsulfate kinase RaxQ [Xanthomonas gardneri ATCC 19865] Length = 658 Score = 38.1 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+ + L Y +L G + Sbjct: 493 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 535 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R G I+L S + D + + Sbjct: 536 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 589 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + +D+P+ + R Sbjct: 590 --------VFVDVPLAVAEAR 602 >gi|312876966|ref|ZP_07736941.1| guanylate kinase [Caldicellulosiruptor lactoaceticus 6A] gi|311796281|gb|EFR12635.1| guanylate kinase [Caldicellulosiruptor lactoaceticus 6A] Length = 199 Score = 38.1 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 64/222 (28%), Gaps = 40/222 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M GL I G G GK T + L + TR+P + Sbjct: 1 MREGLLIVISGPAGTGKGTVVGRLLEKNPNIKLSISKTTRKPRPGEKEGVNYFFVSREQF 60 Query: 60 DEFGAEAEAIVFAAARLDHV---ENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 +E + +A ++ ++ + AL +G ++ + QG + Sbjct: 61 EEEIKNERFLEYAEYNNNYYGTPKDFVFEALEKGFDVILE------IETQGALKIKKAFS 114 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 D +I LP + +R+ R + E E I Sbjct: 115 --------------DAVLIFLLPPSIEELYRRLVKRGTESEDEIRARLEIAKNEI----- 155 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVW-ELVQKR 215 + +++ + A I I+ E ++ R Sbjct: 156 ----KLVSEYD--YCVIN--DNVDDAAEKIQKIIEVEKLKSR 189 >gi|302335770|ref|YP_003800977.1| guanylate kinase [Olsenella uli DSM 7084] gi|301319610|gb|ADK68097.1| guanylate kinase [Olsenella uli DSM 7084] Length = 197 Score = 38.1 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 37/192 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFG 63 G GAGK T +++++ V TR P + H L + Sbjct: 6 RLFVISGPSGAGKGTLVAVVRNQRPGLGLTVSATTRSPRPGEVDGTSYHFLTESDFADRL 65 Query: 64 AEAEAIVFAAA---RLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E + +A+ R + + + + G+ ++ L +D Sbjct: 66 ARGEFLEWASVHGHRYGTLRSEVDERVAAGRSVI--------------------LEIDVQ 105 Query: 121 QEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 ++V+ V PD +I + + +R++ R + ES+ HE Sbjct: 106 GALNVRRVYPDAVLIF-IEPPSMEALEQRLRARGTEDESSLALRL---SNARHE------ 155 Query: 178 LDIARNQPDRCH 189 +++A R Sbjct: 156 MELADKYDARVV 167 >gi|167771629|ref|ZP_02443682.1| hypothetical protein ANACOL_03001 [Anaerotruncus colihominis DSM 17241] gi|167666269|gb|EDS10399.1| hypothetical protein ANACOL_03001 [Anaerotruncus colihominis DSM 17241] Length = 309 Score = 38.1 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 54/154 (35%), Gaps = 18/154 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L L+ + V + AA V E ++E Sbjct: 107 GVNGVGKTTTIGKLAASLKAQGKQVLLGAADTFRAAAIDQLQVWADRAGVEMVRQSE--- 163 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 A V + I G +++CD R ++ +D L +I +Q Sbjct: 164 -GADPAAVVFDAITAGRARGVDVIICD---------TAGRLHNKKNLMDELSKISRVIQR 213 Query: 128 VMP--DCTIILDLPVDIGLKRVQNRYSLRESACL 159 P D ++L L G + +E+A + Sbjct: 214 EAPGCDVEVLLVLDATTGQNALNQARQFKEAAGI 247 >gi|27573167|gb|AAO19983.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573175|gb|AAO19987.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 311 Score = 38.1 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|27573161|gb|AAO19980.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573163|gb|AAO19981.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573169|gb|AAO19984.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573173|gb|AAO19986.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|36939127|gb|AAQ86943.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|36939164|gb|AAQ86950.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|37623912|gb|AAQ95588.1| regulatory protein [Neisseria gonorrhoeae] gi|37623914|gb|AAQ95589.1| regulatory protein [Neisseria gonorrhoeae] Length = 311 Score = 38.1 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|317058120|ref|ZP_07922605.1| predicted protein [Fusobacterium sp. 3_1_5R] gi|313683796|gb|EFS20631.1| predicted protein [Fusobacterium sp. 3_1_5R] Length = 285 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 M G I F G G+GK+T ++ L L + V + Sbjct: 5 MRPGEVIIFTGNPGSGKSTFVNNLMANLVEQGIKVFTMQ 43 >gi|311068081|ref|YP_003973004.1| adenylyl-sulfate kinase [Bacillus atrophaeus 1942] gi|310868598|gb|ADP32073.1| adenylyl-sulfate kinase [Bacillus atrophaeus 1942] Length = 197 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 20/88 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GK+T + R L + Y V V + R ++ G E Sbjct: 33 GLSGSGKSTIANAAARELFEQGYQVVVL-------DGDNIR----HGLNNDLGFSDE--- 78 Query: 71 FAAARLDHVE---NVIRPALMEGKILLC 95 R +++ V + + +G I++ Sbjct: 79 ---DRKENIRRIGEVAKLFVQQGTIVIT 103 >gi|194225867|ref|XP_001917222.1| PREDICTED: similar to adenylate kinase 1 [Equus caballus] Length = 217 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 67/216 (31%), Gaps = 45/216 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEFG 63 F+ G G+GK T + + + Y T + R + S Sbjct: 36 FVV--GGPGSGKGTQCEKIVQ---KYGYTHLST--------GDLLRAEVSSGSARGKMLS 82 Query: 64 AEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 E +V R+D + + + P + K L D G + + Sbjct: 83 EIMEKGQLVPLVNRVDMLRDAMWPKVDTSKGFLID----------GYPREVKG------E 126 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD-- 179 E + P + +D + +R+ R S +D E +KR + + Sbjct: 127 EFEQRIGHPTLLLYVDAGPETMTQRLLKRGQT--SGRVDDNE----ETIKKRLETYYKAT 180 Query: 180 ---IARNQPDRCHI-VDSAHSFQSVATNILNIVWEL 211 IA + V++ S SV + + + L Sbjct: 181 EPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDAL 216 >gi|168230704|ref|ZP_02655762.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472476|ref|ZP_03078460.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458840|gb|EDX47679.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334712|gb|EDZ21476.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 578 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|125623347|ref|YP_001031830.1| deoxyguanosine kinase [Lactococcus lactis subsp. cremoris MG1363] gi|124492155|emb|CAL97084.1| deoxyguanosine kinase [Lactococcus lactis subsp. cremoris MG1363] gi|300070095|gb|ADJ59495.1| deoxyguanosine kinase [Lactococcus lactis subsp. cremoris NZ9000] Length = 217 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 34/163 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF---GAEAEAIV 70 GAGK++ +L L+ + A + V + A + Sbjct: 11 GAGKSSLTEMLAEELETQ-----------------AFYESVHDNKVLPLFYENPQKYAFL 53 Query: 71 FAAARLDHVENVIRPALMEGKILLCDR--FLDSSY----AYQGERDSSQHLFLDSLQEIS 124 L+ + I+ AL + +L DR + DS A G D ++ D L + Sbjct: 54 LQIYFLNKRFDSIKRALSDNNNVL-DRSIYEDSLLFHLNADLGRADETEVEVYDDLLKNM 112 Query: 125 VQEV-------MPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++E+ PD I + + D L+R++ R E D Sbjct: 113 LEEIDSLSFKKRPDLLIHVKVSFDKMLERIKKRGRQFEQLEYD 155 >gi|116617510|ref|YP_817881.1| ABC-type multidrug transport system, ATPase and permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096357|gb|ABJ61508.1| ABC-type multidrug transport system, ATPase and permease component [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 593 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 9/80 (11%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I+ G G+GKTT ++LL RF YDV E R + L D Sbjct: 378 KKGEMIALVGPTGSGKTTVMNLLNRF-----YDVT---EGSVKFDGTDVRKLDLKSLRDH 429 Query: 62 FG-AEAEAIVFAAARLDHVE 80 G E+++F+ D+++ Sbjct: 430 VGIVLQESVLFSGTVADNIK 449 >gi|323466592|gb|ADX70279.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10] Length = 164 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 71/208 (34%), Gaps = 47/208 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ I G G+GKTT +++ L + + + + R +L+ Sbjct: 1 MSN--LIILRGNSGSGKTTLSKRIQKRL---GKNTLLIPQ-------DTVRREMLNAKDG 48 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 ++ N++ + ++ + L++ + Y + ++ LF D + Sbjct: 49 ANNPSIPLLI----------NLLEYGHEDCDYVILEGILNAKW-YLPVFERAKELFGDRI 97 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 D+P + +KR Q R+ E+ EK F+ Sbjct: 98 NAY-----------YFDIPFEETMKRHQERHIFSFGE-----EKMRSWWLEKDYIGFI-- 139 Query: 181 ARNQPDRCHIVDSAH--SFQSVATNILN 206 P++ +D + + V +I+ Sbjct: 140 ----PEKKFTIDMSLEDELEVVMDDIVK 163 >gi|261367614|ref|ZP_05980497.1| putative ABC transporter related protein [Subdoligranulum variabile DSM 15176] gi|282570402|gb|EFB75937.1| putative ABC transporter related protein [Subdoligranulum variabile DSM 15176] Length = 599 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 +++G FI G G GK+T I ++ L+R + V + GG A +R VL Sbjct: 383 IDAGKFIGVAGPSGCGKSTLIKVI-DKLERADGAVTL----GGASLAALSRRVL--AENV 435 Query: 61 EFGAEAEAIVFAAARLDH 78 + ++ A + H Sbjct: 436 ALVPQTPFLI--ADTVYH 451 >gi|255583305|ref|XP_002532415.1| adenylsulfate kinase, putative [Ricinus communis] gi|223527864|gb|EEF29956.1| adenylsulfate kinase, putative [Ricinus communis] Length = 288 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 48/146 (32%), Gaps = 30/146 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I G+ G+GK+T L + L ++ + R ++ Sbjct: 109 QKGCVIWITGLSGSGKSTVACALSQMLYQRGK-------LTYILDGDNLR----HGLNND 157 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +AE R +++ V GK+ F D+ S D+ + Sbjct: 158 LSFKAE------DRAENIRRV----GEVGKL-----FADAGVICIACLISPYRKDRDACR 202 Query: 122 EISVQEVMPDCT-IILDLPVDIGLKR 146 +I D + +D+P+ + R Sbjct: 203 KILPNG---DFIEVFMDIPLQVCESR 225 >gi|188997262|ref|YP_001931513.1| cytidylate kinase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932329|gb|ACD66959.1| cytidylate kinase [Sulfurihydrogenibium sp. YO3AOP1] Length = 214 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 52/238 (21%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFG 63 + I+ +G G+GK+T L + L Y T A + R ++ L + Sbjct: 1 MIIAIDGPAGSGKSTIAKFLAKEL---GYTYIDTGAMYRAAALKLLRLNINLENEEEIMN 57 Query: 64 AEAEAIVFAAA-----RLDHVENVIRPALMEGKILLCDRF--LDSSYAYQGERDSSQHLF 116 + + V ++IR + + R+ + S Q Sbjct: 58 VLENTQILLKDSKVFLDGEDVSDIIRTEEIGNIASIVARYPKVRKWMV------SKQREL 111 Query: 117 LDSLQEISVQE------VMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDY------- 161 + + + ++ + P D I + + +R + + + +DY Sbjct: 112 GEIAKNVVIEGRDAGSRIFPDADLKIFMTASPETRAQR-RVQQLKEKGFMVDYNHILQKI 170 Query: 162 FERKDVMIHEKRRQIFLDIARNQPDR----CHIVDSA-HSFQSVATNILNIVWELVQK 214 ER + K P R I+D+ S + V +N V L+ K Sbjct: 171 IERDKLDYERK----------ESPLRPTEDYIIIDTTDKSIEEV----INYVKSLINK 214 >gi|156030585|ref|XP_001584619.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980] gi|154700779|gb|EDO00518.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980 UF-70] Length = 205 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 49/150 (32%), Gaps = 31/150 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I F G+ +GK+T + L++ L + + L Sbjct: 22 QRGMTIWFTGLSASGKSTIATALEQHLLHLGHAAYR-----------------LDGDNVR 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDS-SYAYQGERD--SSQHLFLD 118 FG + +R +++ + A + F DS + A + Sbjct: 65 FGLNKDLGFDEKSRNENIRRIAEVAKL---------FADSCTIALTSFISPYKADRAVAR 115 Query: 119 SLQEISVQEVM--PDCTIILDLPVDIGLKR 146 L E + P + +D+PV+ KR Sbjct: 116 ELHEKAANGDEAIPFIEVFIDIPVEEAEKR 145 >gi|145593513|ref|YP_001157810.1| hypothetical protein Strop_0955 [Salinispora tropica CNB-440] gi|145302850|gb|ABP53432.1| hypothetical protein Strop_0955 [Salinispora tropica CNB-440] Length = 183 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 44/185 (23%), Gaps = 42/185 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV---LLSC 57 M + G GAGKTT L R + E H ++ Sbjct: 1 MQKPTLVVVSGPPGAGKTTLAHRLARRI---GCPAI-----CRDEIKEGMVHATGEFIAA 52 Query: 58 GVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 DE F V+ L G + A+Q + L Sbjct: 53 PSDELTLRTLPTFF---------QVLELLLNAGVT------TVAEAAFQDRIRRPRLQPL 97 Query: 118 DSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL-------DY-FERKDVMI 169 + EI + + + L R++ R + D Sbjct: 98 GEIAEICMVHCQ--------VNAETALARIRRRQEENPARRAHADSYLSDREIHAAGHDG 149 Query: 170 HEKRR 174 + R Sbjct: 150 FNRVR 154 >gi|86146516|ref|ZP_01064839.1| enterobactin-iron transport system ATP-binding protein [Vibrio sp. MED222] gi|85835779|gb|EAQ53914.1| enterobactin-iron transport system ATP-binding protein [Vibrio sp. MED222] Length = 270 Score = 38.1 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHV 53 G F G G GK+T + L R L+ + + PA E AR + Sbjct: 40 GKFTVIVGPNGCGKSTLLRSLCRLLKPSQGKICLDGQNIQKVPAKELAREL 90 >gi|297519729|ref|ZP_06938115.1| adenylylsulfate kinase [Escherichia coli OP50] Length = 111 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T L+ L + + LL G ++ Sbjct: 33 FTGLSGSGKSTVAGALEEALHKLGVSTY-----------------LLDGDNVRHGLCSDL 75 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 A R +++ V + G ++L Sbjct: 76 GFSDADRKENIRRVGEVANLMVEAGLVVLT 105 >gi|294669442|ref|ZP_06734519.1| signal recognition particle-docking protein FtsY [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291308646|gb|EFE49889.1| signal recognition particle-docking protein FtsY [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 500 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37 GI GAGKTT I L ++ Q + V + Sbjct: 306 GINGAGKTTSIGKLAKYFQSQGKSVIL 332 >gi|282853864|ref|ZP_06263201.1| shikimate kinase [Propionibacterium acnes J139] gi|282583317|gb|EFB88697.1| shikimate kinase [Propionibacterium acnes J139] gi|314923558|gb|EFS87389.1| shikimate kinase [Propionibacterium acnes HL001PA1] gi|314966604|gb|EFT10703.1| shikimate kinase [Propionibacterium acnes HL082PA2] gi|315092193|gb|EFT64169.1| shikimate kinase [Propionibacterium acnes HL110PA4] gi|315092874|gb|EFT64850.1| shikimate kinase [Propionibacterium acnes HL060PA1] gi|315103605|gb|EFT75581.1| shikimate kinase [Propionibacterium acnes HL050PA2] gi|327327427|gb|EGE69203.1| shikimate kinase [Propionibacterium acnes HL103PA1] Length = 169 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 68/208 (32%), Gaps = 41/208 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G G+GK+T SLL + L + DV E + L G F Sbjct: 2 IALIGAPGSGKSTVGSLLAQRLGEEFVDVDAAIE---QAEGRDIPEIFLIDGEPYFRKVE 58 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 R + + A+ G ++ G + ++L+ + Sbjct: 59 --------RRETLA-----AIERGGVVSL-----------GGGAPADVEVGNALERV--- 91 Query: 127 EVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPD 186 C + LD+ RV + + R + ++ E+ R ++ P Sbjct: 92 -----CVVWLDVSARTAADRVGLKDTGRPLLGGQVHSQLVRLMKER-RAVYQR-----PA 140 Query: 187 RCHIVDSAHSFQSVATNILNIVWELVQK 214 + S + V I++ + +L ++ Sbjct: 141 AIRVATDTLSPEQVVDVIVSELADLEEE 168 >gi|227485339|ref|ZP_03915655.1| polyamine-transporting ATPase [Anaerococcus lactolyticus ATCC 51172] gi|227236630|gb|EEI86645.1| polyamine-transporting ATPase [Anaerococcus lactolyticus ATCC 51172] Length = 370 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G F + G G GKTT ++L+ FL+ V++ Sbjct: 34 KGKFYTLLGPSGCGKTTILNLIAGFLEPSKGSVYI 68 >gi|207109113|ref|ZP_03243275.1| guanylate kinase [Helicobacter pylori HPKX_438_CA4C1] Length = 103 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 9/103 (8%) Query: 1 MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57 M++ L I G GAGK+T L+ + + ++ + TR+P + + +S Sbjct: 1 MHNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58 Query: 58 GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96 + G E + A +H + AL EGKI++ D Sbjct: 59 EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101 >gi|154303404|ref|XP_001552109.1| hypothetical protein BC1G_09273 [Botryotinia fuckeliana B05.10] gi|150854584|gb|EDN29776.1| hypothetical protein BC1G_09273 [Botryotinia fuckeliana B05.10] Length = 1906 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 27/93 (29%), Gaps = 21/93 (22%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKTT I+ L R R + LS D Sbjct: 1553 ILIEGSPGVGKTTLIAALARACNR------------------PLTRINLSEQTDLMDLFG 1594 Query: 67 EAIVFAAARLDHVENVIRPAL---MEGKILLCD 96 + A H P L G+ +L D Sbjct: 1595 SDVPVEGAEAGHFAWRDAPFLQAMQRGEWVLLD 1627 >gi|119871568|ref|YP_929575.1| ABC transporter related [Pyrobaculum islandicum DSM 4184] gi|119672976|gb|ABL87232.1| ABC transporter related [Pyrobaculum islandicum DSM 4184] Length = 199 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G+ + G G+GKTT + +L L+ +V++ P R VL Sbjct: 28 GMAVVV-GPNGSGKTTLLKILAGLLEPDEGEVYIMGMPPAVAIRRMRRAVL 77 >gi|145596304|ref|YP_001160601.1| adenylylsulfate kinase [Salinispora tropica CNB-440] gi|145305641|gb|ABP56223.1| adenylylsulfate kinase [Salinispora tropica CNB-440] Length = 508 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 15/35 (42%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 GL I G+ G+GK+T L L+ + Sbjct: 325 RGLVIFLTGLSGSGKSTIARGLADALREQGERTIT 359 >gi|27573185|gb|AAO19992.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 311 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|22299855|ref|NP_683102.1| adenylylsulfate kinase 1 [Thermosynechococcus elongatus BP-1] gi|22296040|dbj|BAC09864.1| adenylylsulfate kinase 1 [Thermosynechococcus elongatus BP-1] Length = 201 Score = 38.1 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 31/88 (35%), Gaps = 20/88 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T ++ L + Y R +L G ++ Sbjct: 33 FTGLSGAGKSTLAHAVEERLHQLGY-----------------RTFVLDGDNVRHGLCSDL 75 Query: 69 IVFAAARLDHVE---NVIRPALMEGKIL 93 + R +++ V + + G I+ Sbjct: 76 GFTESDRKENIRRIGEVAKLMMEAGLIV 103 >gi|327184444|gb|AEA32889.1| hypothetical protein LAB52_10123 [Lactobacillus amylovorus GRL 1118] Length = 131 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 36/152 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M++ I G G+GKTT +++ + + + P T R +L+ Sbjct: 1 MSN--LIILRGNSGSGKTTLSKQIQKKI---GKNTLLI--PQDT-----VRREMLNAKDG 48 Query: 61 EFGAEAEAIV-FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 ++ +H + VI ++ K Y ++ LF +S Sbjct: 49 ADNPAISLLMDLLGYGHEHCDYVILEGILNVKW------------YAPVFKKAKELFGNS 96 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRY 151 + D+P + +KR Q R+ Sbjct: 97 MNAY-----------YFDIPFEETVKRHQERH 117 >gi|320085090|emb|CBY94877.1| putative ABC transporter ATP-binding protein MA_1747 [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 583 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 45 GPDGAGKTTLMRMLAGLLKADG 66 >gi|292490883|ref|YP_003526322.1| guanylate kinase [Nitrosococcus halophilus Nc4] gi|291579478|gb|ADE13935.1| guanylate kinase [Nitrosococcus halophilus Nc4] Length = 215 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 35/169 (20%), Positives = 54/169 (31%), Gaps = 28/169 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G GAGKT+ + L + V H TR P + + + Sbjct: 1 MMPGSLFVVAAPSGAGKTSLVKALVDSMTGVCLSVSHTTRPPRPGER-DGVDYYFIDDAA 59 Query: 60 DEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E +A A + A DH + L +G ++ + +QG R Sbjct: 60 FETMQQAGAFLEHAQVFDHHYGTAREKVAGLLEQGMDVILE------IDWQGRRQ----- 108 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYF 162 VQ PDC I LP + +R++ R E+ Sbjct: 109 ---------VQARFPDCVSIFILPPSRETLERRLRLRGQDGETVIARRM 148 >gi|258654284|ref|YP_003203440.1| guanylate kinase [Nakamurella multipartita DSM 44233] gi|258557509|gb|ACV80451.1| guanylate kinase [Nakamurella multipartita DSM 44233] Length = 194 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 17/38 (44%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M+ G G G GK+T ++ ++ L Y V T Sbjct: 1 MDRGRLFVLSGPSGVGKSTVLTQVRELLPGLWYSVSAT 38 >gi|257867621|ref|ZP_05647274.1| ABC transporter [Enterococcus casseliflavus EC30] gi|257873951|ref|ZP_05653604.1| ABC transporter [Enterococcus casseliflavus EC10] gi|257801704|gb|EEV30607.1| ABC transporter [Enterococcus casseliflavus EC30] gi|257808115|gb|EEV36937.1| ABC transporter [Enterococcus casseliflavus EC10] Length = 268 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 17/25 (68%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 MN+G FI+ G GAGK+T ++ + Sbjct: 32 MNAGDFITIIGGNGAGKSTLLNSIA 56 >gi|182677072|ref|YP_001831218.1| sulfate adenylyltransferase, large subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182632955|gb|ACB93729.1| sulfate adenylyltransferase, large subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 652 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +L++ L ++VH +LL G + Sbjct: 476 FTGLSGSGKSTIANLVESRLYA--HNVHT---------------ILLDGDNIRHGLNKDL 518 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++++ V + G I +C S + LD + I Sbjct: 519 GFSDVDRVENIRRIGEVAKLMTEAGLIAIC-----SFISPFRAERDLARSLLDEGEFIE- 572 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 I +D P++ + R Sbjct: 573 --------IFVDTPIEDCIAR 585 >gi|168236745|ref|ZP_02661803.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168820036|ref|ZP_02832036.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194738238|ref|YP_002113908.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|205352075|ref|YP_002225876.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856254|ref|YP_002242905.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|194713740|gb|ACF92961.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290183|gb|EDY29540.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|205271856|emb|CAR36691.1| hypothetical ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205343126|gb|EDZ29890.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206708057|emb|CAR32348.1| hypothetical ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326627117|gb|EGE33460.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 578 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|198242682|ref|YP_002214780.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937198|gb|ACH74531.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326622535|gb|EGE28880.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 578 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|149372627|ref|ZP_01891739.1| adenylylsulfate kinase [unidentified eubacterium SCB49] gi|149354670|gb|EDM43234.1| adenylylsulfate kinase [unidentified eubacterium SCB49] Length = 198 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + L++ L K + L G + Sbjct: 30 FTGLSGSGKSTIANALEKALFEKGIHTYS-----------------LDGDNVRLGLNSNL 72 Query: 69 IVFAAARLDHVENVIRPA---LMEGKILLC 95 A R +++ + + + G +++ Sbjct: 73 SFSAEDRTENIRRIAEVSNLMIDAGLVVIA 102 >gi|160897704|ref|YP_001563286.1| ABC transporter-like protein [Delftia acidovorans SPH-1] gi|160363288|gb|ABX34901.1| ABC transporter related [Delftia acidovorans SPH-1] Length = 217 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 49/170 (28%), Gaps = 46/170 (27%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G EG GKT+ + +L L + + ++P + + AE + Sbjct: 33 GGEGCGKTSLLQMLAGQLPLQGGRLAYPQQPDPSQR----------PALFWRDPRAE--L 80 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLD---SSYAYQGERDSSQHLF----------- 116 A R RPA + R L S A+Q D Sbjct: 81 SNAERA-------RPA---QDWVQAQRQLYPAWSEAAWQAHADGLGLEPHLHKPLLALST 130 Query: 117 --LDSLQE---ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDY 161 L L + + +++D L R + R A L+ Sbjct: 131 GSLRKLWMAAGWASGVPL----LLID-EPLAALDRGSMDHVQRTMAGLNR 175 >gi|92119184|ref|YP_578913.1| ABC transporter related [Nitrobacter hamburgensis X14] gi|91802078|gb|ABE64453.1| ABC transporter related protein [Nitrobacter hamburgensis X14] Length = 260 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKN-YDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G ++ G GAGKTT + L L + +V P T A R L G Sbjct: 31 GGCLVALVGPNGAGKTTLLRALAGLLPSEGTIEVCGDALPSLTLRERARRFAYLPQGHQM 90 Query: 62 FGAEAEAIVFAAARLDH 78 + A R H Sbjct: 91 HWPLPARDIVALGRYPH 107 >gi|62179384|ref|YP_215801.1| putative ABC-type multidrug transport system, ATPase component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614944|ref|YP_001588909.1| hypothetical protein SPAB_02698 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550506|ref|ZP_02344263.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|224582630|ref|YP_002636428.1| hypothetical protein SPC_0814 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|62127017|gb|AAX64720.1| putative ABC-type multidrug transport system, ATPase component [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364308|gb|ABX68076.1| hypothetical protein SPAB_02698 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|205324552|gb|EDZ12391.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|224467157|gb|ACN44987.1| hypothetical ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322713855|gb|EFZ05426.1| putative ABC-type multidrug transport system, ATPase component [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 578 Score = 38.1 bits (88), Expect = 1.00, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|329936126|ref|ZP_08285925.1| hypothetical protein SGM_1417 [Streptomyces griseoaurantiacus M045] gi|329304444|gb|EGG48323.1| hypothetical protein SGM_1417 [Streptomyces griseoaurantiacus M045] Length = 753 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 15/29 (51%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVH 36 GI G GKTT +L +L Y+VH Sbjct: 190 VIAGIPGVGKTTVALMLAAWLMGNGYEVH 218 >gi|322488082|emb|CBZ23327.1| putative adenylate kinase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 207 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 16/92 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN---------Q 184 + D +R+ +R + E++D E R F + Sbjct: 121 LYYDCSEATMEERLLSRGANSG-------EKRDDDAAETIRNRFRVNVQECMPVVEAYKA 173 Query: 185 PDRCHIVDSAHSFQSVATNILNIVWELVQKRV 216 RCH++D+ +V + E+ +K + Sbjct: 174 NGRCHVIDANRDRDTVYAETRKVFLEMGEKPL 205 >gi|297544623|ref|YP_003676925.1| cytidylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842398|gb|ADH60914.1| cytidylate kinase [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 221 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 41/234 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G GAGK+T L + L D A + + + + Sbjct: 5 IAIDGPAGAGKSTVSKKLAKLLNYTYIDTGAMYRAITYKALQKGIKFIEEDKISDIAQST 64 Query: 67 EAIV----FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + D E + +P + E L+ + + + + +E Sbjct: 65 DITLEGEKIFLDGKDISEEIRKPEVSEKVSLVS------------KIPKVREILVQKQRE 112 Query: 123 ISVQE------------VMPDCT--IILDLPVDIGLKRVQNRYSLRESACLDYFER---- 164 I+ + V+PD L ++ KR + R ++ + Y+E Sbjct: 113 IAKGKNVVMDGRDIGTVVLPDAQFKFFLTASLEERAKR-RYRELKTKNVNVSYYEVVKEI 171 Query: 165 KDVMIHEKRRQIF-LDIARNQPDRCHIVDSA-HSFQSVATNILNIVWELVQKRV 216 ++ + +R+ L IA++ ++D+ S + V + NI+ E ++ + Sbjct: 172 ENRDTIDSQRETSPLKIAKDS----IVIDTTYLSEEEVVEKLYNIIKEGLKGEI 221 >gi|297526052|ref|YP_003668076.1| GTP-binding signal recognition particle SRP54 G- domain protein [Staphylothermus hellenicus DSM 12710] gi|297254968|gb|ADI31177.1| GTP-binding signal recognition particle SRP54 G- domain protein [Staphylothermus hellenicus DSM 12710] Length = 444 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 16/136 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G++G+GKTT + L + + + Y V + PAA L ++ G Sbjct: 107 GLQGSGKTTTAAKLAYYYKLEGYRVGLVTADTYRPAAYDQ----LKQLGEQIGVPVYGEP 162 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 ++ + + G I++ D R + L ++EI+ + + Sbjct: 163 NNKDAVEIARRGVEYFVSRGFDIVIVD---------TAGRHHREEDLLKEMREIA-ENIK 212 Query: 130 PDCTIILDLPVDIGLK 145 PD +++ + IG + Sbjct: 213 PDEVVLV-IDAAIGQQ 227 >gi|256084465|ref|XP_002578449.1| xpa-binding protein 1 (mbdin) [Schistosoma mansoni] gi|238663823|emb|CAZ34687.1| xpa-binding protein 1 (mbdin), putative [Schistosoma mansoni] Length = 376 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 12/102 (11%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQ---------RKNYDVHVTREPGGTPAAEAA--RHVL 54 I G+ G+GKTT + L +L + VH + + V+ Sbjct: 15 LIVL-GMAGSGKTTFVKKLNEYLTVSSNSSYTINLDPAVHHIPYNPNIDIRDTVKFKEVM 73 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 G GA ++ F A++ V ++I + ++ D Sbjct: 74 KQYGYGPNGAIMTSLNFFASQFHKVVDIINNNSGKYSYVIID 115 >gi|224283730|ref|ZP_03647052.1| adenylate kinase [Bifidobacterium bifidum NCIMB 41171] gi|313140886|ref|ZP_07803079.1| adenylate kinase [Bifidobacterium bifidum NCIMB 41171] gi|313133396|gb|EFR51013.1| adenylate kinase [Bifidobacterium bifidum NCIMB 41171] Length = 187 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 41/211 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G +G GK T +LL T G L ++ + E + Sbjct: 7 GPQGVGKGTQAALLAEHY---GIPAIST---GDIFRYNIKNKTELGLEALKYTDKGELVP 60 Query: 71 FAAARLDHVENVIRPAL----MEGKILLCDRFLDSSYAYQGERDSSQHLFLDS-LQEISV 125 + +++ L + +L D + R++SQ LD+ L+E+ Sbjct: 61 -----DELTNKIVKDRLAMDDAKNGWIL-DGY---------PRNASQVKALDAMLEELGT 105 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD----IA 181 D + LD D+ ++R+ R + D E KR + + Sbjct: 106 PL---DKVVALDADHDVLMQRIAKRAQ-EQGRSDDTPEA-----IAKRLATYAKETAPLL 156 Query: 182 RNQPDR--CHIVDSAHSFQSVATNILNIVWE 210 R +D ++ NI+ + + Sbjct: 157 DTYKSRGQLVAIDGVGDIGAIQANIVAALSD 187 >gi|194444576|ref|YP_002040052.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194403239|gb|ACF63461.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] Length = 578 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|156043655|ref|XP_001588384.1| hypothetical protein SS1G_10831 [Sclerotinia sclerotiorum 1980] gi|154695218|gb|EDN94956.1| hypothetical protein SS1G_10831 [Sclerotinia sclerotiorum 1980 UF-70] Length = 202 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 37/179 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDV------HVTREPGGTPAAEAARHVLLSCGVD 60 I G G GK T L L + D+ H TR P + + + + Sbjct: 11 IIISGPSGVGKGT----LYSRLLANHPDLFTTSISHTTRAPRPGEKRDVDYYFVPMEEFE 66 Query: 61 EF---GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 G E +F R +I EGKI++ D + + Sbjct: 67 AMIAKGDFVEHAMFGGNRYGTSRKMIEEKRGEGKIVVLD---------------IEMEGV 111 Query: 118 DSLQEISVQEVMPDCTIIL------DLPV-DIGLKRVQNRYSLRESACLDYFERKDVMI 169 + ++ P I + D+ ++ KR++ R + +E + + + + Sbjct: 112 KQIHSLN--PPFPARYIFISPPSTADMTAYEVLEKRLRGRGTEKEESIQKRLAQAKLEL 168 >gi|16764180|ref|NP_459795.1| ABC-type multidrug transport system ATPase component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167992049|ref|ZP_02573147.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168240681|ref|ZP_02665613.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168466407|ref|ZP_02700269.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194448160|ref|YP_002044845.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197250693|ref|YP_002145772.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197265989|ref|ZP_03166063.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390245|ref|ZP_03216856.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|16419323|gb|AAL19754.1| putative ABC-type multidrug transport system, ATPase component [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194406464|gb|ACF66683.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|195630978|gb|EDX49564.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214396|gb|ACH51793.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197244244|gb|EDY26864.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199602690|gb|EDZ01236.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205329595|gb|EDZ16359.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205340304|gb|EDZ27068.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261246075|emb|CBG23877.1| hypothetical ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992560|gb|ACY87445.1| putative ABC-type multidrug transport system ATPase component [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157402|emb|CBW16891.1| hypothetical ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911841|dbj|BAJ35815.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321226390|gb|EFX51441.1| putative ATP-binding component of a transport system [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616293|gb|EFY13202.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619543|gb|EFY16418.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622761|gb|EFY19606.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628673|gb|EFY25460.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322637137|gb|EFY33840.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641663|gb|EFY38299.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644542|gb|EFY41082.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648475|gb|EFY44927.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654211|gb|EFY50534.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658126|gb|EFY54393.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663600|gb|EFY59802.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670336|gb|EFY66476.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671572|gb|EFY67694.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676928|gb|EFY72995.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682853|gb|EFY78872.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686532|gb|EFY82514.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129124|gb|ADX16554.1| putative ABC-type multidrug transport system ATPase component [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194571|gb|EFZ79764.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199098|gb|EFZ84194.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202053|gb|EFZ87112.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208921|gb|EFZ93858.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213906|gb|EFZ98676.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215242|gb|EFZ99987.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220839|gb|EGA05277.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227302|gb|EGA11470.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229920|gb|EGA14043.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233145|gb|EGA17241.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240880|gb|EGA24922.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243197|gb|EGA27217.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248736|gb|EGA32664.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323258768|gb|EGA42425.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260687|gb|EGA44292.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267876|gb|EGA51355.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268738|gb|EGA52198.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 578 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|71665420|ref|XP_819680.1| hypothetical protein [Trypanosoma cruzi strain CL Brener] gi|70884992|gb|EAN97829.1| hypothetical protein, conserved [Trypanosoma cruzi] Length = 4506 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 3/51 (5%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQ--RKNYDVHVTRE-PGGTPAAEAARHVL 54 + G +GKTT I L L + + D V E T E R +L Sbjct: 1755 VVITGPPFSGKTTQIRRLVEKLNVSQLDLDAMVRAEAEFDTAEGELIRTIL 1805 >gi|323251740|gb|EGA35607.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] Length = 577 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|297617856|ref|YP_003703015.1| dephospho-CoA kinase [Syntrophothermus lipocalidus DSM 12680] gi|297145693|gb|ADI02450.1| dephospho-CoA kinase [Syntrophothermus lipocalidus DSM 12680] Length = 209 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 41/229 (17%) Query: 11 GIEG---AGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 G+ G +GK+T +LK + + EPG + + ++ Sbjct: 5 GLTGGIASGKSTVSYILKSLGAVIIDADKVARKVVEPGQPAWQDIVKEFGQQVLNEDMTI 64 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E + GK++ D+ L + ++ F + L ++ Sbjct: 65 NREVL--------------------GKLVFSDQSLLAKLNRITHPRVIEY-FREELARMA 103 Query: 125 VQEVMPDCTIILDLP--VDIGLKRVQNR---YSLRESACLDY-FERKDV---MIHEKRRQ 175 + P+ ++LD+P + G+ R+ + E L+ ER+ ++ R Sbjct: 104 REN--PEAVVVLDVPLLFESGMYRLADEIWVVWADEKVQLERLMEREGFTPEEAWQRIRA 161 Query: 176 IF-LDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKK 223 L+ + DR +++++ + +E + + KK Sbjct: 162 QMPLEEKARRADR--VINNSGTLDETVEQTTRFFYETISAHDDKIKEKK 208 >gi|317050294|ref|YP_004111410.1| molybdopterin-guanine dinucleotide biosynthesis protein B [Desulfurispirillum indicum S5] gi|316945378|gb|ADU64854.1| molybdopterin-guanine dinucleotide biosynthesis protein B [Desulfurispirillum indicum S5] Length = 177 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 17/33 (51%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 I F G G+GKTT I L + L + V V + Sbjct: 11 IGFTGTSGSGKTTLIEKLVQQLSHRGLKVGVIK 43 >gi|284034154|ref|YP_003384085.1| hypothetical protein Kfla_6283 [Kribbella flavida DSM 17836] gi|283813447|gb|ADB35286.1| hypothetical protein Kfla_6283 [Kribbella flavida DSM 17836] Length = 206 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 30/147 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + GI GAGK+T ++ L P G+ + + GA Sbjct: 28 LVVLAGIPGAGKSTLLARL---------------FPAGSDVRVLDSAAVRARWKPALGAI 72 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + L + V+R G +++ D + Q ++ H ++V Sbjct: 73 PYPLWRPLMHLAYYVQVLRAMRDGGPLVIHD-CATRPWVRQLIGRAASH------NGLAV 125 Query: 126 QEVMPDCTIILDLPVDIGL--KRVQNR 150 +M LD+P D+ +R +NR Sbjct: 126 HLIM------LDVPEDVARLGQRARNR 146 >gi|317154708|ref|YP_004122756.1| cytidylate kinase [Desulfovibrio aespoeensis Aspo-2] gi|316944959|gb|ADU64010.1| cytidylate kinase [Desulfovibrio aespoeensis Aspo-2] Length = 220 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 16/28 (57%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL 28 M+S L ++ +G G GK+T L R L Sbjct: 1 MHSPLIVTIDGPAGVGKSTVAKRLARAL 28 >gi|168263684|ref|ZP_02685657.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347832|gb|EDZ34463.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 578 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|204929805|ref|ZP_03220826.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204320799|gb|EDZ06000.1| ABC transporter, ATP-binding protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 578 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGLLKADG 61 >gi|153853288|ref|ZP_01994697.1| hypothetical protein DORLON_00683 [Dorea longicatena DSM 13814] gi|149754074|gb|EDM64005.1| hypothetical protein DORLON_00683 [Dorea longicatena DSM 13814] Length = 206 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 38/171 (22%) Query: 3 SGLFISFEGIEGAGKTTHIS-LLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS--CGV 59 G+ I G G+GK T + LLK++ TR P P E R Sbjct: 4 KGILIVVSGFSGSGKGTIMKELLKQYDNYALSISATTRNP--RPGEEDGREYFFKTVEDF 61 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSY----AY---QGERDSS 112 ++ A+ E I +A R++D+ Y AY Q E Sbjct: 62 EKMIAKEELIEYA------------------------RYVDNYYGTPRAYVEEQLEAGKD 97 Query: 113 QHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE 163 L ++ + V+E PD T++L + + +++R R + +D E Sbjct: 98 VILEIEIQGALKVKEKFPD-TLLLFVTPPSAEE-LKSRLVGRGTETMDVIE 146 >gi|27573177|gb|AAO19988.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 296 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 209 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 264 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 265 -TGDSAAVCFDAVQAAKARGIDIVLAD 290 >gi|27573165|gb|AAO19982.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573171|gb|AAO19985.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573179|gb|AAO19989.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573181|gb|AAO19990.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573187|gb|AAO19993.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|27573189|gb|AAO19994.1| regulatory protein PilA [Neisseria gonorrhoeae] gi|37623916|gb|AAQ95590.1| regulatory protein [Neisseria gonorrhoeae] Length = 311 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|52142572|ref|YP_084256.1| hypothetical protein BCZK2669 [Bacillus cereus E33L] gi|51976041|gb|AAU17591.1| group-specific protein [Bacillus cereus E33L] Length = 282 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|68072181|ref|XP_678004.1| XPA binding protein 1 [Plasmodium berghei strain ANKA] gi|56498328|emb|CAI00130.1| XPA binding protein 1, putative [Plasmodium berghei] Length = 472 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 13/102 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT----------REPGGTPAAEAAR--HVL 54 I+ G+ G+GKTT+I L +L+ + T + P ++ + V+ Sbjct: 182 IAI-GMAGSGKTTYIGALYNYLKIQRKKKVYTINLDPAVKNLQYPTNIDIRDSIKYHEVM 240 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + GA + A R D V ++ + ++ D Sbjct: 241 KEYKLGPNGAIMTCLNLFATRFDKVIELLEKRKHKLNYIIVD 282 >gi|14521615|ref|NP_127091.1| hypothetical protein PAB0938 [Pyrococcus abyssi GE5] gi|5458834|emb|CAB50321.1| Hypothetical protein [Pyrococcus abyssi GE5] Length = 480 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 18/124 (14%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GK+ + + LQ + V R P P + + V+ E + E + Sbjct: 166 GCGKSQTSRKVAQLLQEMGFKVVAVRHP--MPYGDLRKQVVQRFATFEDLDKHECTIEE- 222 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE---VMP 130 P L G ++ + Y+ ++ L + + P Sbjct: 223 ------REEYEPYLERGMVV------YAGVDYEKILREAEKEADIILWDGGNNDFPFFEP 270 Query: 131 DCTI 134 D I Sbjct: 271 DLWI 274 >gi|88597132|ref|ZP_01100368.1| polyphosphate kinase 2 [Campylobacter jejuni subsp. jejuni 84-25] gi|88190821|gb|EAQ94794.1| polyphosphate kinase 2 [Campylobacter jejuni subsp. jejuni 84-25] Length = 207 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%) Query: 3 SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 GL I EG + AGK I L L + V +P + Sbjct: 54 KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 102 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + + I G+I++ DR Sbjct: 103 -----------------YFQRYIAHLPSAGEIVIFDRSWY 125 >gi|254238896|ref|ZP_04932219.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas aeruginosa C3719] gi|126170827|gb|EAZ56338.1| ATP sulfurylase GTP-binding subunit/APS kinase [Pseudomonas aeruginosa C3719] Length = 633 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 48/151 (31%), Gaps = 34/151 (22%) Query: 2 NSGLF------ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL 55 +G F I F G+ GAGK+T ++R L V+V + RH L Sbjct: 457 RAGRFGQQPATILFSGLSGAGKSTLAYAVERKLFDMGRAVYVL-------DGQNLRHDLN 509 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + E + R HV + G I LC + A E Sbjct: 510 KGLPQDRAGRTENWL----RTAHVA---KQFNEAGLISLC-----AFVAPSAEGREQARA 557 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKR 146 + + + + T+ + + +R Sbjct: 558 LIGA-ERL--------ITVYVQASPQVCRER 579 >gi|257451547|ref|ZP_05616846.1| hypothetical protein F3_00687 [Fusobacterium sp. 3_1_5R] Length = 292 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 M G I F G G+GK+T ++ L L + V + Sbjct: 12 MRPGEVIIFTGNPGSGKSTFVNNLMANLVEQGIKVFTMQ 50 >gi|254475355|ref|ZP_05088741.1| conserved hypothetical protein [Ruegeria sp. R11] gi|214029598|gb|EEB70433.1| conserved hypothetical protein [Ruegeria sp. R11] Length = 216 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 56/158 (35%), Gaps = 24/158 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG--TPAAEAARHVL-LSCGVDE 61 ++ G G+GK+T S L L V G A R +L + Sbjct: 29 RLVALAGAPGSGKSTLASRLVEALCTAGTQAAVVPMDGFHLDNRLLAERDLLPRKGAPET 88 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F A + AA D +VI P + DR LD A G + L+ Sbjct: 89 FDQRGFARLVAALASD--RDVIYP--------IFDRSLD--LAIAGAGAVDGACEVAVLE 136 Query: 122 EISV-------QEVMP--DCTIILDLPVDIGLKRVQNR 150 + +++ P D ++ +D+P + +R+ R Sbjct: 137 GNYLLFDSDGWRDLAPMWDLSVRVDVPRSVLRQRLVER 174 >gi|172038947|ref|YP_001805448.1| adenylate kinase [Cyanothece sp. ATCC 51142] gi|171700401|gb|ACB53382.1| adenylate kinase [Cyanothece sp. ATCC 51142] Length = 186 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 41/217 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL-----L 55 M++G + F G G+GK T L + N T E R + L Sbjct: 1 MSTGKGLIFLGPPGSGKGTQAQQLSKEF---NIPHIST--------GEMLREAIAQQTPL 49 Query: 56 SCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + + E + + + + EG +L D F R+ SQ Sbjct: 50 GQKAQTYVDQGELVPDDLLLDLIEDRLNQEDAQEG-WIL-DGF---------PRNVSQAE 98 Query: 116 FLDS-LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-- 172 FLD L ++ I LD+P ++ + R+ R ++ R+ + EK Sbjct: 99 FLDKLLHKLDKFSPQ---AINLDVPDEVIIDRLLLRGRKDDNKETIR--RRLDVYREKTQ 153 Query: 173 -RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIV 208 + Q D+ +D Q V T++ +V Sbjct: 154 PVLDYY-----RQHDKLSSIDGNRELQEVTTSLKEVV 185 >gi|170017577|ref|YP_001728496.1| deoxynucleoside kinase [Leuconostoc citreum KM20] gi|169804434|gb|ACA83052.1| Deoxynucleoside kinase [Leuconostoc citreum KM20] Length = 210 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 52/225 (23%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT SL+ N+ EP G + + Sbjct: 10 GVGKTTLTSLIAE-----NFGTKAFYEPVGDNPVLPL---------YYSDPKQYGFLLQI 55 Query: 74 ARLDHVENVIRPALMEGKILLCDR--FLDSSYAYQGERDS------------SQHLFLDS 119 L+ ++I+ AL + +L DR + D+ + + +D + + Sbjct: 56 YFLNRRFDMIKQALADDNNVL-DRSIYEDALFTSENHKDGNITDAEMSVYTQLLNNMMSE 114 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 LQ++ + PD + + + L R++ R E F+ D + RQ + Sbjct: 115 LQKLPKKS--PDLLVYAETDFETILYRIKKRGRDYEQ-----FDNNDDL-----RQYYFR 162 Query: 180 IARNQPDRCHIVDSA-----------HSFQSVATNILNIVWELVQ 213 I + D++ T ILN + + ++ Sbjct: 163 IWSAYREWFDNYDASPKIKVDLQTYDLEIPENQTIILNQINDALK 207 >gi|119467570|ref|XP_001257591.1| signal sequence receptor alpha subunit, putative [Neosartorya fischeri NRRL 181] gi|119405743|gb|EAW15694.1| signal sequence receptor alpha subunit, putative [Neosartorya fischeri NRRL 181] Length = 649 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 21/137 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV-DEFGAE 65 IS G+ G GK+T++ + FL + NY V + T + A + + E A Sbjct: 442 ISIVGVNGVGKSTNLGKICYFLLQNNYRVLIAA--CDTFRSGAVEQLRVHARNLKELSAR 499 Query: 66 A---EAIVFAAARLDHVENVIRPALMEG-----KILLCDRFLDSSYAYQGERDSSQHLFL 117 E ++ NV + A+ G ++L D R + + Sbjct: 500 ENAGEVELYEKGYGKDAANVAKDAVEYGAANQFDVVLID---------TAGRRHNDQRLM 550 Query: 118 DSLQEISVQEVMPDCTI 134 SL++ + PD Sbjct: 551 SSLEKFAKFA-KPDKIF 566 >gi|120434615|ref|YP_860305.1| HPPK and dNK domain-containing protein [Gramella forsetii KT0803] gi|117576765|emb|CAL65234.1| protein containing HPPK and dNK domain [Gramella forsetii KT0803] Length = 378 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 31/190 (16%), Positives = 59/190 (31%), Gaps = 20/190 (10%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 +I+ EG GAGKT+ +++ K P E E A Sbjct: 181 YIAVEGNIGAGKTSFSTMVSEDFNAKLILERFKDNPFLPKFYE----------NKERYAF 230 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDS--LQEI 123 + F A R + + + + ++ D + S + L I Sbjct: 231 PLEMSFLADRYQQLSDDLAQYDLFKDFVISDYDVFKSLIFAKITLHEDEYSLYHKLFHLI 290 Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 + V P+ I L + L+ ++ R E +L+ ++ Sbjct: 291 YKELVKPELYIYLYQNTERLLENIKKRGRDYEQNI-------QPEYLMDINNSYLNFIKS 343 Query: 184 QPD-RCHIVD 192 Q + + I+D Sbjct: 344 QSNMKVQIID 353 >gi|315302120|ref|ZP_07873075.1| spermidine/putrescine import ATP-binding protein PotA [Listeria ivanovii FSL F6-596] gi|313629508|gb|EFR97686.1| spermidine/putrescine import ATP-binding protein PotA [Listeria ivanovii FSL F6-596] Length = 364 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|311894806|dbj|BAJ27214.1| putative guanylate kinase [Kitasatospora setae KM-6054] Length = 185 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 67/207 (32%), Gaps = 39/207 (18%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 G G GK+T ++ +++ V TR P H + D+ A Sbjct: 9 VLSGPSGVGKSTVVAHMRKQFPEVWLSVSATTRHPRPGERDGVQYHFVDHEQFDKLVANG 68 Query: 67 EAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 E + VFA R + L +G+ +L + QG R + Sbjct: 69 ELLEWAVFAGNRYGTPRQAVLDKLDKGEPVLLE------IDLQGARQVKES--------- 113 Query: 124 SVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 MP+ ++ P + ++R+ R + + + V + A Sbjct: 114 -----MPEAQLVFLAPPSWEELVRRLTGRGTESQDVIDERLAAAKVEL----------AA 158 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIV 208 + D + S + VA +L ++ Sbjct: 159 EAEFDTTLV---NTSVEQVAAELLALL 182 >gi|296314873|ref|ZP_06864814.1| signal recognition particle-docking protein FtsY [Neisseria polysaccharea ATCC 43768] gi|296838320|gb|EFH22258.1| signal recognition particle-docking protein FtsY [Neisseria polysaccharea ATCC 43768] Length = 469 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 276 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 330 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 331 TTGDSAAVCFDAVQAAKARGIDIVLAD 357 >gi|163786404|ref|ZP_02180852.1| Deoxynucleoside kinase subfamily, putative [Flavobacteriales bacterium ALC-1] gi|159878264|gb|EDP72320.1| Deoxynucleoside kinase subfamily, putative [Flavobacteriales bacterium ALC-1] Length = 204 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 61/199 (30%), Gaps = 38/199 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKTT LL + + + + L ++ + Sbjct: 3 IAVAGNIGAGKTTLTKLLAKHYK------------WEAQLEDVVDNPYLDDFYNQMERWS 50 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114 + F +R V + GK ++ DR + D+ + RD + Sbjct: 51 FNLQVYFLNSRFRQVNQI----HDSGKDIIQDRTIYEDAHIFAPNLHAMGLMTNRDFENY 106 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 L L E V+ PD I L + N S DY + + Sbjct: 107 SSLFELMESFVKG--PDLLIYL-------RSSIPNLVSQIHKRGRDYENTISIDYLSRLN 157 Query: 175 QIFLD-IARNQPDRCHIVD 192 + + I + I+D Sbjct: 158 ERYEAWITKYDKGNLLIID 176 >gi|149182918|ref|ZP_01861376.1| ComGA [Bacillus sp. SG-1] gi|148849367|gb|EDL63559.1| ComGA [Bacillus sp. SG-1] Length = 358 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 33/112 (29%), Gaps = 25/112 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQR-KNYDVHVTREP----------------GG 43 MNS I F G G+GKTT + L +V +P G Sbjct: 140 MNSHGLIVFTGPTGSGKTTTLYSLVEHCSSVMQRNVVTLEDPVEKYNDSLVQVQVNEKAG 199 Query: 44 TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLC 95 A R +L E R + + A + G ++L Sbjct: 200 VTYAAGLRAILRHDPDIIMVGEI--------RDEETAEIAIRAALSGHLVLS 243 >gi|126179950|ref|YP_001047915.1| ATPase [Methanoculleus marisnigri JR1] gi|125862744|gb|ABN57933.1| ATPase, PilT family [Methanoculleus marisnigri JR1] Length = 631 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G+ I+ G GAGKTT L FL N+ V P + + Sbjct: 260 RRGVLIA--GPPGAGKTTLAQSLATFLADNNFVVKTMEAPRDLQVPDHITQY--TALEGS 315 Query: 62 FGAEAEAIVF 71 AEA++ Sbjct: 316 MANTAEALLL 325 >gi|222054537|ref|YP_002536899.1| Adenylyl-sulfate kinase [Geobacter sp. FRC-32] gi|254766503|sp|B9M543|CYSC_GEOSF RecName: Full=Adenylyl-sulfate kinase; AltName: Full=APS kinase; AltName: Full=ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; AltName: Full=Adenosine-5'-phosphosulfate kinase gi|221563826|gb|ACM19798.1| Adenylyl-sulfate kinase [Geobacter sp. FRC-32] Length = 203 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T ++ L RK T +L G ++ Sbjct: 33 FTGLSGSGKSTLAHAVEEELFRKG---CYTY--------------ILDGDNIRHGLNSDL 75 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 A R +++ V + + G I+L Sbjct: 76 GFSEADRRENIRRIGEVAKLFVDAGIIVLA 105 >gi|47220344|emb|CAF98443.1| unnamed protein product [Tetraodon nigroviridis] Length = 226 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 71/230 (30%), Gaps = 44/230 (19%) Query: 7 ISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + G GAGK+T + L K + + V H TR P S G Sbjct: 7 VVLSGPSGAGKSTLLKKLMKEYDNVFGFSVSHTTRNPRPGEENGKGTASSSSFGAPSHSE 66 Query: 65 EAEAIVFAAARLD-HVE------------NVIRPALMEGKILLCDRFLDSSYAYQGERDS 111 A++ + D H I A G + + S A Q + Sbjct: 67 LESALIVLSGISDYHYVTREAMQAGINNGEFIENAEFSGNM-----YGTSKAAVQAVQAK 121 Query: 112 SQHLFLDS----LQEISVQEVMPDCTIILDLPV---DIGLKRVQNRYSLRESACLDYFE- 163 + LD ++ I + P I + + ++ KR+++R + E Sbjct: 122 NLICILDIDMQGVKNIKKTNLNP---IYISIQPPSMEVLEKRLRDRKTESEENLQKRLNA 178 Query: 164 -RKDVMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 + ++ +K P ++ + + + N + E + Sbjct: 179 AKNEMEFSKK------------PGIFDVIIVNDNLEDAYDRLKNALLEEI 216 >gi|84496514|ref|ZP_00995368.1| ABC-type multidrug transport system ATPase and permease component [Janibacter sp. HTCC2649] gi|84383282|gb|EAP99163.1| ABC-type multidrug transport system ATPase and permease component [Janibacter sp. HTCC2649] Length = 628 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 45/171 (26%) Query: 4 GLFISFEGIEGAGKTTHISLLKRF-------------------LQRKNYDV-HVTREPGG 43 G ++ G GAGK+T SL+ R L+ V VT+E Sbjct: 406 GQLVALVGPSGAGKSTLTSLVARLYDPTSGAVRINGADLRTVSLESLRDTVSVVTQE--A 463 Query: 44 TPAAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSS 102 + R LL A+ EA + AA D V+ L G ++ DR Sbjct: 464 HLFHDTIRTNLLYAAPSATDADIEAALRAARIWDLVDR-----LPSGLDTVVGDR----- 513 Query: 103 YAYQGERDSSQHLFLDSLQEISVQEVMPDCTII------LDLPVDIGLKRV 147 G R S ++ + ++ ++ LD ++ ++R Sbjct: 514 ----GHRLSGGEKQRIAIARLLLKGPR--LVVLDEATAHLDSESEVAVQRA 558 >gi|307353992|ref|YP_003895043.1| signal recognition particle-docking protein FtsY [Methanoplanus petrolearius DSM 11571] gi|307157225|gb|ADN36605.1| signal recognition particle-docking protein FtsY [Methanoplanus petrolearius DSM 11571] Length = 361 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 15/130 (11%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGKTT I+ + +L+ K Y V + G T A A + + D G + + Sbjct: 169 FTGVNGAGKTTTIAKVAFYLKSKGYSVVIGS--GDTFRAGANQQM--KTHADRIGVKVIS 224 Query: 69 IVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQE 127 A + + + A ++L D R ++ + L++I + Sbjct: 225 HQEGADPSAVLFDTVNYAKAHNIDVVLAD---------TAGRFHNKGNLMKQLEKI-RRV 274 Query: 128 VMPDCTIILD 137 + PD +D Sbjct: 275 MNPDIVAYVD 284 >gi|295087574|emb|CBK69097.1| uridine kinase [Bacteroides xylanisolvens XB1A] Length = 234 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 18/162 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L I G G+GKTT + + L V + ++ ++ + D A Sbjct: 33 LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 91 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 +++ I L EGK + + + Q E + + ++ I Sbjct: 92 FEWSLL---------SKHIM-MLKEGKSIEQPTYSYLTCTRQSETIHIEPREVVIIEGIL 141 Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ +M D I +D D L RV R + + Sbjct: 142 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVIERGRTAE 182 >gi|226467728|emb|CAX69740.1| guanylate kinase [Schistosoma japonicum] Length = 201 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 11/97 (11%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRK-NYDV-HVTREP-----GGTPAAEAARHVLLSC-GV 59 F G GAGK+T + +L + V H TR+P G R LS Sbjct: 8 VFSGPSGAGKSTVLQMLMEKFPNNFGFSVSHTTRKPRPGEKDGIDYHFTDRDTFLSEISE 67 Query: 60 DEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 +F AE FA + ++ L G+I + D Sbjct: 68 GKFLEYAE---FAGNIYGTSRSAVQSVLDAGRICILD 101 >gi|187934749|ref|YP_001887324.1| shikimate kinase [Clostridium botulinum B str. Eklund 17B] gi|226729122|sp|B2TQ47|AROK_CLOBB RecName: Full=Shikimate kinase; Short=SK gi|187722902|gb|ACD24123.1| shikimate kinase [Clostridium botulinum B str. Eklund 17B] Length = 165 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 68/208 (32%), Gaps = 46/208 (22%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M + +F+ G+ G GK+T ++ + L K D+ + E ++ + Sbjct: 1 MKNKIFLI--GMPGCGKSTIGEIIAKELMLKFIDMDICIE---EKTSKTISELFEQGEDY 55 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E+E + +I+ +++ G + + +++L Sbjct: 56 FRDIESETC----------KEIIKY----DNVVIAT----------GGGVVKKDINIETL 91 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + I +D PV+ + + + + ++++R I+ Sbjct: 92 KNNG-------LVIFIDRPVEKIISDIDVSRRPLLKNGKERI----IGLYKERYDIYKKA 140 Query: 181 ARNQPDRCHIVDSAHSFQSVATNILNIV 208 +V+ + + V I I+ Sbjct: 141 CHK-----IVVNGS-TIDEVVGEIKKII 162 >gi|196042810|ref|ZP_03110049.1| hypothetical protein BC03BB108_2864 [Bacillus cereus 03BB108] gi|196026294|gb|EDX64962.1| hypothetical protein BC03BB108_2864 [Bacillus cereus 03BB108] Length = 282 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|254852186|ref|ZP_05241534.1| dephospho-CoA kinase [Listeria monocytogenes FSL R2-503] gi|300764771|ref|ZP_07074761.1| dephospho-CoA kinase [Listeria monocytogenes FSL N1-017] gi|258605491|gb|EEW18099.1| dephospho-CoA kinase [Listeria monocytogenes FSL R2-503] gi|300514447|gb|EFK41504.1| dephospho-CoA kinase [Listeria monocytogenes FSL N1-017] Length = 200 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 79/216 (36%), Gaps = 32/216 (14%) Query: 11 GIEGA---GKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAA----RHVLLSCGVD 60 G+ G+ GK+T +++++ L + E G E +LL+ G Sbjct: 6 GLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVERGTEGLKEIVAYFGEEILLADGTL 65 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E I + + + + P + + + ++ + + + L Sbjct: 66 NRAKLGEIIFKDKEKREKLNEITHPRVKDYML-------EAREHFFEAGEELVFFDIPLL 118 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQI-FLD 179 E ++ ++ D +++ + LKR+ R +L + L E + + I EK R+ F Sbjct: 119 FESHLESLV-DKIVVVWTTPETELKRLMERNNLTKEDALRRIESQ-MGIDEKARKADF-- 174 Query: 180 IARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++D+ S + +L + V+ + Sbjct: 175 ----------VIDNNESLEKTQKQVLTFIKRFVKNK 200 >gi|153007903|ref|YP_001369118.1| hypothetical protein Oant_0558 [Ochrobactrum anthropi ATCC 49188] gi|151559791|gb|ABS13289.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 185 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 18/104 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 FI G G+GK+T I L+R+ + T E G + V + + Sbjct: 7 RFIIISGGPGSGKSTLI----DALERQGFP--RTVEAGRAIIQD---QVAIGGNALPWSD 57 Query: 65 E---AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 AE ++ R + R +L DR + Y Sbjct: 58 RALFAELMLSWEMRSHTMAEQQR------GTVLFDRGVPDVIGY 95 >gi|27573183|gb|AAO19991.1| regulatory protein PilA [Neisseria gonorrhoeae] Length = 311 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G AAR L + G E Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLA---AGDTFRAAAREQLQAWG--ERNNVTVISQ 278 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 279 TTGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|83643465|ref|YP_431900.1| signal recognition particle-docking protein FtsY [Hahella chejuensis KCTC 2396] gi|83631508|gb|ABC27475.1| signal recognition particle-docking protein FtsY [Hahella chejuensis KCTC 2396] Length = 376 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L Q++ V + G T A A + + + A+ Sbjct: 181 GVNGVGKTTTIGKLANKFQQEGRSVVLAA--GDTFRAAAVEQLQVWGERNNVPVIAQH-- 236 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + ++ A G +++ D Sbjct: 237 TGADSASVIFDAVQAAKSRGVDVVIAD 263 >gi|28211258|ref|NP_782202.1| shikimate kinase [Clostridium tetani E88] gi|28203698|gb|AAO36139.1| shikimate kinase [Clostridium tetani E88] Length = 167 Score = 38.1 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 33/160 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 GAGK+T L + +Q YD T A +H+ G + F Sbjct: 3 GAGKSTFGKELSKIIQ---YDFIDTDYEIEKIERSAIKHIFKEKGENYFRKLE------- 52 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 D + ++I+ + K++ +F +++ ++ + T Sbjct: 53 --RDLLNDIIKF---DKKVV--------------ATGGGLPIFFNNMDILNKNGI----T 89 Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 I LD+P++ LKR + + + +++ + + + Sbjct: 90 IFLDVPLEELLKRNEKNDNRPLLDKENKYDKLKEIYNSRI 129 >gi|332184110|gb|AEE26364.1| Cytidylate kinase [Francisella cf. novicida 3523] Length = 221 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 9/27 (33%), Positives = 14/27 (51%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRF 27 MN+ I+ +G G GK T L ++ Sbjct: 1 MNNSKIITIDGPSGVGKGTLAKALAKY 27 >gi|325571168|ref|ZP_08146740.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus casseliflavus ATCC 12755] gi|325156253|gb|EGC68439.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus casseliflavus ATCC 12755] Length = 268 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 17/25 (68%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 MN+G FI+ G GAGK+T ++ + Sbjct: 32 MNAGDFITIIGGNGAGKSTLLNSIA 56 >gi|320333144|ref|YP_004169855.1| Guanylate kinase [Deinococcus maricopensis DSM 21211] gi|319754433|gb|ADV66190.1| Guanylate kinase [Deinococcus maricopensis DSM 21211] Length = 222 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 43/212 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKN--YDV-HVTREPGGTPAAEAARHVLLSCG 58 GL I G G GK T R+L ++ Y V TRE H + Sbjct: 23 KRGLLIVMTGASGVGKGTIRE---RWLADQDIFYSVSWTTREARPGERDGTDYHFVTREA 79 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRP---ALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 + + A +H I P AL G+ ++ L Sbjct: 80 FEAEIDRNGFLEHAEFVGNHYGTPIAPIEAALARGQDVV--------------------L 119 Query: 116 FLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ L + ++ +P+ +I +P L ++ R R + + E++ + R+ Sbjct: 120 EIEVLGAMQIKPRIPEAILIFIVPP--SLTELRRRLEGRATETPERIEKR----MTRARE 173 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNI 207 +I +V+ V + + Sbjct: 174 ---EILEAHNFHYVVVN-----DEVDRAVAEL 197 >gi|302761066|ref|XP_002963955.1| hypothetical protein SELMODRAFT_270406 [Selaginella moellendorffii] gi|300167684|gb|EFJ34288.1| hypothetical protein SELMODRAFT_270406 [Selaginella moellendorffii] Length = 575 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 35/240 (14%), Positives = 72/240 (30%), Gaps = 49/240 (20%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNY---DVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 G +GK T ++K + D+ GT + A+ + + + Sbjct: 78 ISGAPASGKGTQCEMIKDKYNLVHISAGDLLRAEVAAGTDYGKRAKEFM---DQGKLVPD 134 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + RL + L++G R SQ L++L+ Sbjct: 135 DVVVSMVKQRLQLPDVCEAGWLLDGY----------------PRSLSQAQALEALK---- 174 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRY--------------SLRESACLDYFERKDVMI-- 169 + P I+L++P D+ ++RV R + ++ Sbjct: 175 --IRPQLFILLEVPEDVLIERVVGRRLDPVTGKIYHLKHFPPEDPEVAARLIQRSDDTEK 232 Query: 170 --HEKRRQIFLDIARN---QPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPLSSKKD 224 E+ R ++A VD V +I + + + ++ K+D Sbjct: 233 KAMERLRTYHENLASVLSVYESCIKTVDGNRPKSEVFGDISSFLDDRIKAATKVSKPKQD 292 >gi|300772965|ref|ZP_07082834.1| deoxynucleoside kinase [Sphingobacterium spiritivorum ATCC 33861] gi|300759136|gb|EFK55963.1| deoxynucleoside kinase [Sphingobacterium spiritivorum ATCC 33861] Length = 204 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 57/171 (33%), Gaps = 35/171 (20%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA-RHVLLSCGVDEFGAE 65 I+ G GAGKTT LL + P EA + L + Sbjct: 3 IAIVGNIGAGKTTLTQLLANHFK-------------YEPQFEAVDNNPYLEDFYADMKRW 49 Query: 66 AEAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY--------QGERDSSQ 113 A + F +R H+ + +G ++ DR + D AY G Sbjct: 50 AFNLQIFFLNSRFRHIVQLQ----EKGIDMIQDRTIYED---AYIFAENLFDMGLMSERD 102 Query: 114 HLFLDSLQEISVQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESA-CLDYF 162 ++ + + + PD I L V + +Q R ESA LDY Sbjct: 103 FENYSNIFQSIIHYIKPPDLLIYLKASVPTLVNNIQRRGRDYESAIRLDYL 153 >gi|241889822|ref|ZP_04777120.1| ComG operon protein 1 [Gemella haemolysans ATCC 10379] gi|241863444|gb|EER67828.1| ComG operon protein 1 [Gemella haemolysans ATCC 10379] Length = 331 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 16/36 (44%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREP 41 I F G G+GK+T + L L N V +P Sbjct: 141 LILFSGPTGSGKSTSLYKLASELANMNKQVITVEDP 176 >gi|308234452|ref|ZP_07665189.1| cytidylate kinase ;1-acyl-sn-glycerol-3-phosphate acyltransferase [Atopobium vaginae DSM 15829] gi|328944299|ref|ZP_08241763.1| pantoate-beta-alanine ligase/cytidylate kinase [Atopobium vaginae DSM 15829] gi|327491218|gb|EGF22993.1| pantoate-beta-alanine ligase/cytidylate kinase [Atopobium vaginae DSM 15829] Length = 513 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 7/39 (17%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGG 43 + I+ +G G+GK+T L + H+T G Sbjct: 1 MIIAIDGPSGSGKSTVAKALA-------HKAHLTYLDTG 32 >gi|215488311|ref|YP_002330742.1| conserved predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli O127:H6 str. E2348/69] gi|215266383|emb|CAS10820.1| conserved predicted protein with nucleoside triphosphate hydrolase domain [Escherichia coli O127:H6 str. E2348/69] Length = 237 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + + G +++ + R ++ + +G +L+ DR+ Sbjct: 77 KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126 >gi|48478588|ref|YP_024294.1| signal recognition particle receptor FtsY [Picrophilus torridus DSM 9790] gi|48431236|gb|AAT44101.1| signal recognition particle receptor FtsY [Picrophilus torridus DSM 9790] Length = 315 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 19/135 (14%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 LFI GI G GKTT I + +L+ N V + A ++ E Sbjct: 123 LFI---GINGTGKTTTIGKIASYLKNNNKKVVIAAGDTFRAGAIEQISIIGEKTGTEVIK 179 Query: 65 EAEAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 F + + I A +L D A + + + + + ++ + Sbjct: 180 HD----FGSDPASVAYDAIEHARARRIDYVLID------SAGRMQTNKNLLSEMKKIKRV 229 Query: 124 SVQEVMPDCTII-LD 137 + PD T++ LD Sbjct: 230 A----RPDLTLLVLD 240 >gi|62857597|ref|NP_001016792.1| deoxycytidine kinase, gene 2 [Xenopus (Silurana) tropicalis] gi|89273906|emb|CAJ83862.1| Novel protein similar to deoxycytidine kinase [Xenopus (Silurana) tropicalis] Length = 264 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 40/190 (21%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP-----AAEAARHV--------- 53 S EG AGK+T + + L++ N + V EP + Sbjct: 26 SVEGNIAAGKSTFVRI----LEKANDEWEVVPEPIAKWCNVQTTGNEDEELSTSQKSGGN 81 Query: 54 LLSCGVDEFGAEAEAIVFAAA----RLDH------VENVIRPALMEGKILLCDRFLDSSY 103 LL D+ A A R + P + + DR++ +S Sbjct: 82 LLQMLYDKPTRWAYTFQTYACLSRVRAQLNPPSHKLREAEHPVQFFERSVYSDRYVFASS 141 Query: 104 AYQGERDSSQHLFLDS------LQEISVQEVMPDC--TIILDLPVDIGLKRVQNRYSLRE 155 ++ + + + L + D I L + + R+ R E Sbjct: 142 LFESQNINETEWAIYQDWHTWLLNQFESDI---DLDGIIYLRATPEKCMDRIHTRGRDEE 198 Query: 156 SA-CLDYFER 164 L+Y E Sbjct: 199 QGIELEYLES 208 >gi|15828968|ref|NP_326328.1| ABC transporter ATP-binding protein [Mycoplasma pulmonis UAB CTIP] gi|14089911|emb|CAC13670.1| ABC TRANSPORTER ATP-BINDING PROTEIN [Mycoplasma pulmonis] Length = 511 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 21/35 (60%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 G FIS G G+GKTT ++ L +++K ++ + Sbjct: 38 KGSFISILGPSGSGKTTLLNSLASLVKKKEGEILI 72 >gi|315655849|ref|ZP_07908747.1| adenylate kinase [Mobiluncus curtisii ATCC 51333] gi|315489913|gb|EFU79540.1| adenylate kinase [Mobiluncus curtisii ATCC 51333] Length = 193 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 62/219 (28%), Gaps = 49/219 (22%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G GAGK TH + + R + E Sbjct: 6 VIMGPPGAGKGTHAKEIATHF-----------NIPWISTGDIFRK--------HKAEKTE 46 Query: 68 AIVFAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDS----------SQH 114 +I + +G+ + + DR + + D Q Sbjct: 47 L-----------GKLIESYIDKGEFVPDSVTDRIVCERISQSDATDGFLLDGYPRSIPQA 95 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSL--RESACLDYFERKDVMIHEK 172 L ++ + V D I LD+ +R+ R + R + + + + E Sbjct: 96 KVLKAVLAEANDRV--DAAIYLDVSAAEVKQRLLKRAEIEGRTDDTPEVIDHRLEVFFEA 153 Query: 173 RRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 Q LD + VD + +A +L ++ E+ Sbjct: 154 T-QPLLDFYEQE-GVLRKVDGEGTIAEIAQRLLTVMEEI 190 >gi|289434069|ref|YP_003463941.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170313|emb|CBH26853.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|254993304|ref|ZP_05275494.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes FSL J2-064] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|254899022|ref|ZP_05258946.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes J0161] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|46907037|ref|YP_013426.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes str. 4b F2365] gi|226223424|ref|YP_002757531.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes Clip81459] gi|255521056|ref|ZP_05388293.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes FSL J1-175] gi|46880303|gb|AAT03603.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes serotype 4b str. F2365] gi|225875886|emb|CAS04590.1| Putative spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|328475512|gb|EGF46271.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes 220] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|16799871|ref|NP_470139.1| hypothetical protein lin0797 [Listeria innocua Clip11262] gi|16413248|emb|CAC96029.1| lin0797 [Listeria innocua Clip11262] gi|313624591|gb|EFR94573.1| spermidine/putrescine import ATP-binding protein PotA [Listeria innocua FSL J1-023] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|47094812|ref|ZP_00232426.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258612108|ref|ZP_05267513.2| spermidine/putrescine ABC transporter [Listeria monocytogenes F6900] gi|293596479|ref|ZP_05261502.2| spermidine/putrescine import ATP-binding protein [Listeria monocytogenes J2818] gi|47016694|gb|EAL07613.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes str. 1/2a F6854] gi|258608403|gb|EEW21011.1| spermidine/putrescine ABC transporter [Listeria monocytogenes F6900] gi|293589433|gb|EFF97767.1| spermidine/putrescine import ATP-binding protein [Listeria monocytogenes J2818] Length = 366 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60 >gi|47093928|ref|ZP_00231666.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes str. 4b H7858] gi|258611919|ref|ZP_05243124.2| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL R2-503] gi|293596178|ref|ZP_05228927.2| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J1-194] gi|293596824|ref|ZP_05264546.2| spermidine/putrescine ABC transporter [Listeria monocytogenes HPB2262] gi|300765113|ref|ZP_07075100.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes FSL N1-017] gi|146325074|sp|Q722B1|POTA_LISMF RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|47017688|gb|EAL08483.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes str. 4b H7858] gi|258607156|gb|EEW19764.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL R2-503] gi|293582735|gb|EFF94767.1| spermidine/putrescine ABC transporter [Listeria monocytogenes HPB2262] gi|293593152|gb|EFG00913.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J1-194] gi|300514238|gb|EFK41298.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes FSL N1-017] Length = 366 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60 >gi|330465013|ref|YP_004402756.1| metallophosphoesterase [Verrucosispora maris AB-18-032] gi|328807984|gb|AEB42156.1| metallophosphoesterase [Verrucosispora maris AB-18-032] Length = 842 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 50/198 (25%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ G+ G+GK+T H P +++A R ++ D+ Sbjct: 12 LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDAFRAMVADDENDQSA-- 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 +A D + V L G++ + D + Q +L ++ Sbjct: 56 ------SADAFDALHYVAGKRLRAGRLTVVD------------ATNLQPHARAALVRVAR 97 Query: 126 -QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEK-RRQIFLDIARN 183 +V+P I+LD+P + R + R F ++ + + R+ + +AR Sbjct: 98 EHDVLP-VAIVLDVPEALAWARTEARADRT-------FGKQVLARMSRDLRRTYAQLARE 149 Query: 184 QPDRCHI------VDSAH 195 + H+ +D+A Sbjct: 150 GFRKVHVLRGVDEIDAAQ 167 >gi|328467357|gb|EGF38437.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes 1816] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|323498060|ref|ZP_08103066.1| signal recognition particle-docking protein FtsY [Vibrio sinaloensis DSM 21326] gi|323316868|gb|EGA69873.1| signal recognition particle-docking protein FtsY [Vibrio sinaloensis DSM 21326] Length = 404 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 5/87 (5%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + Q + V + G T A A + + + A+ Sbjct: 207 GVNGVGKTTTIGKLAKQFQAEGKSVMLAA--GDTFRAAAVEQLQVWGERNGVPVVAQH-- 262 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 A + + I A +G +++ D Sbjct: 263 TGADSASVIYDAIESAKAKGVDVVIAD 289 >gi|312890949|ref|ZP_07750477.1| guanylate kinase [Mucilaginibacter paludis DSM 18603] gi|311296565|gb|EFQ73706.1| guanylate kinase [Mucilaginibacter paludis DSM 18603] Length = 189 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 5/101 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M G I F GAGKTT + L + + + TR+P G + + + Sbjct: 1 MTQGKLIIFSAPSGAGKTTIVHHLLGHIPDLEFSISATTRKPRGDERDGVDYYFISNEEF 60 Query: 60 DEFGAEAEAI----VFAAARLDHVENVIRPALMEGKILLCD 96 A+ + + V+ + + I+ +GK ++ D Sbjct: 61 LHRIAKKQFVEFEEVYTGTFYGTLRSEIQRIWDKGKHVIFD 101 >gi|292622643|ref|XP_002665053.1| PREDICTED: antigen peptide transporter 1-like [Danio rerio] Length = 731 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 22/101 (21%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTP--------------- 45 + +G + G G+GKTT +SLL+RF Q +N ++ + ++P + Sbjct: 503 LKAGKITALVGPSGSGKTTVVSLLERFYQPQNGEILLDQKPLLSYKDQYLHEKISVVSQE 562 Query: 46 ---AAEAARHVLLSCGVDEFGAEAEAIVFAAARLDHVENVI 83 A + R + + E ++AAARL + + I Sbjct: 563 PVLFARSVRENIKYGKENATNEE----IYAAARLANAHDFI 599 >gi|294625398|ref|ZP_06704031.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600316|gb|EFF44420.1| binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 519 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+ + L Y +L G + Sbjct: 354 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 396 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R G I+L S + D + + Sbjct: 397 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 450 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + +D+P+ + R Sbjct: 451 --------VFVDVPLAVAEAR 463 >gi|296109685|ref|YP_003616634.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus infernus ME] gi|295434499|gb|ADG13670.1| L-seryl-tRNA(Sec) kinase [Methanocaldococcus infernus ME] Length = 241 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 37/150 (24%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 + I G+ GKTT L + L + DV V ++ R + Sbjct: 1 MLIILTGLPAVGKTTFAKNLAKELSNYDVDVIVL-------GSDLIRE-----SFPRWKE 48 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 E E + R+ + +I A+ + ++ D D++Y Y R Sbjct: 49 EYEEFI----RVSTL-KLIEMAIKK-YWVIVD---DTNY-YNSMRRDLIK---------- 88 Query: 125 VQEVMPD--CTIILDLPVDIGLKRVQNRYS 152 + PD I L P++ LKR + R Sbjct: 89 ---ICPDNYAIIYLKAPIEEILKRNEERGK 115 >gi|295839507|ref|ZP_06826440.1| dephospho-CoA kinase [Streptomyces sp. SPB74] gi|197699397|gb|EDY46330.1| dephospho-CoA kinase [Streptomyces sp. SPB74] Length = 211 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 70/214 (32%), Gaps = 35/214 (16%) Query: 11 GIEGAGKTTHISLLKRF---LQRKNYDVHVTREPGGTPAAEAARHV---LLSCGVDEFGA 64 GI GAGK+ LL L + EPG A +L+ Sbjct: 12 GI-GAGKSEVSRLLVSHGAVLIDSDRIAREVVEPGTDGLAAIVAAFGTEVLAPDGSLDRP 70 Query: 65 EAEAIVFA-AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI 123 A+VFA RL + +++ P + A + ++ + + Sbjct: 71 RLGALVFADEERLRTLNDIVHPLVRA------------RSAALQAAAPPGAVVVNDVPLL 118 Query: 124 SVQEVMP--DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIA 181 + P D +++D L+R+ + E+ + R+ +A Sbjct: 119 VENGLQPLYDLVLVVDASPATQLRRLTGDRGMSEADARARMAAQAG------RE--QRLA 170 Query: 182 RNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 ++ + + + +A + VW +++R Sbjct: 171 AAD----IVIANDGTREELAARVRE-VWRALERR 199 >gi|169333688|ref|ZP_02860881.1| hypothetical protein ANASTE_00072 [Anaerofustis stercorihominis DSM 17244] gi|169259537|gb|EDS73503.1| hypothetical protein ANASTE_00072 [Anaerofustis stercorihominis DSM 17244] Length = 522 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 7/68 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQ-------RKNYDVHVTREPGGTPAAEAARHVLL 55 G FIS G GAGK+T +++L + ++ + + P R L Sbjct: 318 KGDFISVIGPNGAGKSTLLNILGKVIKPYRGKVVSTGKVAVLPQNPVSLFIKNTIRKDLE 377 Query: 56 SCGVDEFG 63 D Sbjct: 378 DISEDYIS 385 >gi|91228753|ref|ZP_01262664.1| putative ATP-binding component of dipeptide transport system [Vibrio alginolyticus 12G01] gi|91187699|gb|EAS74020.1| putative ATP-binding component of dipeptide transport system [Vibrio alginolyticus 12G01] Length = 282 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 32/74 (43%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGK+T I LL + + +V+V P +A+ + + + ++ Sbjct: 53 IAIVGPSGAGKSTLIELLFGLRKPTSGEVYVCGYPLSRSSAKQRQELCQHIQLIPQEPQS 112 Query: 67 EAIVFAAARLDHVE 80 + A R +E Sbjct: 113 SLNPYYAVRQILLE 126 >gi|78355297|ref|YP_386746.1| ATPase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217702|gb|ABB37051.1| ATPase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 662 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 17/86 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHV---------------TREPGGTPAAEAAR 51 I+ G G GK+T + L+ L++ V T P T E R Sbjct: 358 IALVGPNGCGKSTLLKLVAGRLEKTGGSVVQGSLVRMGYFSQHQLDTLNPANTVLGEIRR 417 Query: 52 HVLLSCGVDEFGAEAEAIVFAAARLD 77 L E + +F + Sbjct: 418 --LSDPRTTEEELMSVLGLFMLGQAY 441 >gi|15827179|ref|NP_301442.1| shikimate kinase [Mycobacterium leprae TN] gi|221229657|ref|YP_002503073.1| shikimate kinase [Mycobacterium leprae Br4923] gi|20137461|sp|Q9CCS5|AROK_MYCLE RecName: Full=Shikimate kinase; Short=SK gi|13092727|emb|CAC30025.1| putative shikimate kinase [Mycobacterium leprae] gi|219932764|emb|CAR70610.1| putative shikimate kinase [Mycobacterium leprae Br4923] Length = 199 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 34/163 (20%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGK+T L + L + T + + G +EF Sbjct: 9 GLPGAGKSTIGRRLSKAL---GVSLLDTDAAIEKQTGRSIADIFAIDGEEEF-------- 57 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R++ E V+R AL+E ++ G + +L Sbjct: 58 ---RRIE--EGVVRAALVEHDGVVS----------LGGGAVTSPGVCAALAG-------- 94 Query: 131 DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 I L++ + ++R A D E+ ++ + Sbjct: 95 HIVIYLEINAEEAMRRACGSTVRPLLAGPDRAEKFQDLMARRV 137 >gi|307297594|ref|ZP_07577400.1| dephospho-CoA kinase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916854|gb|EFN47236.1| dephospho-CoA kinase [Thermotogales bacterium mesG1.Ag.4.2] Length = 190 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 76/209 (36%), Gaps = 43/209 (20%) Query: 14 GAGKTTHISLLKRF------LQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAE 67 G+GK+T L + L + +D RE + R + L+CG + + Sbjct: 10 GSGKSTAAERLAKSKMELISLDKLGHDAL--REEQESLVNSFGRGI-LTCGNVDRKKLSR 66 Query: 68 AIVFAAARLDHVENVIRPALMEG--KIL---LCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 + + L + ++ P + +I+ D ++ + E Sbjct: 67 IVFENSDLLTKLNKIVHPVIKRKALEIVGKDFSDHYIFDG---------------ALIHE 111 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 I + E D I + P +I ++R+ R + A + ++ ++ +LD + Sbjct: 112 IGLAEYC-DKIIWFECPNEIAIERLMKRGMSKSRA-------ESILASQQ----YLDSIK 159 Query: 183 NQPDRCHIVDSAHSFQSVATNILNIVWEL 211 D +V + S + + +I++E Sbjct: 160 ESVD--AVVTTLGSSEETFEKLRSILFEW 186 >gi|294786899|ref|ZP_06752153.1| putative ABC transporter, ATP-binding protein [Parascardovia denticolens F0305] gi|294485732|gb|EFG33366.1| putative ABC transporter, ATP-binding protein [Parascardovia denticolens F0305] Length = 614 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 6/91 (6%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 G FI+F G GAGKTT + L ++ + + + + G P ++ LS Sbjct: 374 KKGEFIAFVGRNGAGKTTLLKCLSGAVKPQAGSMIFKSGQSRGKPISQTIDLSQLSPK-- 431 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGK 91 ++E + F +H E +R L G+ Sbjct: 432 ---KKSEIMSFMVQDYNHFEFTVRENLSLGR 459 >gi|293363600|ref|ZP_06610356.1| cytidylate kinase [Mycoplasma alligatoris A21JP2] gi|292552949|gb|EFF41703.1| cytidylate kinase [Mycoplasma alligatoris A21JP2] Length = 227 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 63/238 (26%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G GAGK+T + + L+ + G A A ++ +D + Sbjct: 6 IAIDGPAGAGKSTVSKEIAKRLE------YTFINSGSMYRAIAYNAIMHDVDLDNENSVT 59 Query: 67 EAI-------------------VFAAARLDHVENVIRPALMEGKILLCDR-FLDSSYAYQ 106 E + V A R +H+ + K+ R F+ S Q Sbjct: 60 ETLKSVEIELKLDESVWINGRDVSNAIRAEHISHGSSTIAKYQKV----REFVVSYI--Q 113 Query: 107 GERDSSQHLFLDSLQEISVQEVMPD--CTIILDLPVDIGLKRVQNRYSLRESACLDYFER 164 +++ +D + ++MP I L +R + R + Sbjct: 114 NMTKANKGFIIDG--RDTTFKLMPHAEVKIFLWAD---AQERAKRRQ----------LQN 158 Query: 165 KDVMIHEKRRQIFLDIA---RNQPDRCH----------IVDSAH-SFQSVATNILNIV 208 + + ++ LD+ +R ++D + SF+ V I+ IV Sbjct: 159 ETMGFKTSYDEVLLDVKLRDEQDMNRKVDPLHKTEDATLIDCTNMSFEEVVLEIIRIV 216 >gi|284989439|ref|YP_003407993.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160] gi|284062684|gb|ADB73622.1| TrwC relaxase [Geodermatophilus obscurus DSM 43160] Length = 1208 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYD-VHVT 38 + EG GAGKTT ++ ++ L+ V VT Sbjct: 456 LVVVEGAAGAGKTTALAATRQLLEADGRHLVVVT 489 >gi|258515330|ref|YP_003191552.1| cytidylate kinase [Desulfotomaculum acetoxidans DSM 771] gi|257779035|gb|ACV62929.1| cytidylate kinase [Desulfotomaculum acetoxidans DSM 771] Length = 229 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL 28 M + I+ +G GAGK+T LL L Sbjct: 1 MIDNMSIAIDGPAGAGKSTVARLLAEKL 28 >gi|294952788|ref|XP_002787459.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983] gi|239902442|gb|EER19255.1| Cytidylate kinase, putative [Perkinsus marinus ATCC 50983] Length = 244 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 11/77 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ +G G+GK+ +L L T+ + R + L + Sbjct: 24 ITIDGPAGSGKSVVAEMLADSLSG------FTK----LDSGALYRSIALFVNEGDIKGGI 73 Query: 67 EAIVFAAARLDHVENVI 83 E++ + A R +E VI Sbjct: 74 ESLAYEAFRA-LLEQVI 89 >gi|229493465|ref|ZP_04387250.1| guanylate kinase [Rhodococcus erythropolis SK121] gi|229319426|gb|EEN85262.1| guanylate kinase [Rhodococcus erythropolis SK121] Length = 199 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 66/219 (30%), Gaps = 44/219 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 G + G GK++ + L+ L + V TR+P Sbjct: 15 RRGRLVVLAGPSAVGKSSVVRELRTRLPELVFSVSATTRDPRPGEVDGKDYRFTSREEFQ 74 Query: 61 EFGAEAEAIVFA-----AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHL 115 E + +A R + AL GK +L + Sbjct: 75 RMIDSGELLEWAEIHGGLQRSGTPAAPVEEALEAGKPVL--------------------V 114 Query: 116 FLDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKR 173 +D +V++ MP+ ++ P D+ ++R+ R + E E + Sbjct: 115 EVDLAGARAVRKAMPEALLVFMAPPSWDVLVQRLTGRGTETEDVVARRLETA------RV 168 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELV 212 ++A IV+ + V+ +V LV Sbjct: 169 -----ELAAQDEFDTVIVN-----EDVSRACDELVSLLV 197 >gi|218698016|ref|YP_002405683.1| D-gluconate kinase [Escherichia coli 55989] gi|218354748|emb|CAV01817.1| D-gluconate kinase, thermosensitive [Escherichia coli 55989] Length = 187 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + LD + L R+Q R L FE L+ + + Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQEDEQDIVRI 149 Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216 D H +V V + Q R+ Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174 >gi|315230945|ref|YP_004071381.1| ABC-type multidrug transport system ATPase [Thermococcus barophilus MP] gi|315183973|gb|ADT84158.1| ABC-type multidrug transport system ATPase [Thermococcus barophilus MP] Length = 330 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 61/205 (29%), Gaps = 22/205 (10%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQR-------KNYDVHVTREPGGTPAAEAARHVL 54 G +F G GAGKTT I +L L+ +DV + + Sbjct: 28 KKGEIFAFLGPNGAGKTTTIHMLVTLLKPTSGNATVAGHDVIKEPDKVRKKIGIVFQDPS 87 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 L + + D ++ I L K + D F D + + Sbjct: 88 LDRELTAYENMYIHGKIYGLSGDKLKKRIMEML---KFVELDEFKDRQVKFFSGGMQRRL 144 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 +L + E + LD IGL Q R + E E + + Sbjct: 145 EIARAL----IHEPE---VLFLD-EPTIGLD-PQTRAHIWEYIKKMKEEHEMTIFLT--- 192 Query: 175 QIFLDIARNQPDRCHIVDSAHSFQS 199 ++D A DR I+D Sbjct: 193 THYMDEAEQLADRIAIIDHGRIIAE 217 >gi|146321343|ref|YP_001201054.1| ABC-type uncharacterized transport system, ATPase component [Streptococcus suis 98HAH33] gi|253752186|ref|YP_003025327.1| ABC transporter ATP-binding protein [Streptococcus suis SC84] gi|253754012|ref|YP_003027153.1| ABC transporter ATP-binding protein [Streptococcus suis P1/7] gi|253755946|ref|YP_003029086.1| ABC transporter ATP-binding protein [Streptococcus suis BM407] gi|145692149|gb|ABP92654.1| ABC-type uncharacterized transport system, ATPase component [Streptococcus suis 98HAH33] gi|251816475|emb|CAZ52111.1| ABC transporter ATP-binding protein [Streptococcus suis SC84] gi|251818410|emb|CAZ56239.1| ABC transporter ATP-binding protein [Streptococcus suis BM407] gi|251820258|emb|CAR46714.1| ABC transporter ATP-binding protein [Streptococcus suis P1/7] gi|292558774|gb|ADE31775.1| ABC transporter, ATP-binding protein [Streptococcus suis GZ1] gi|319758573|gb|ADV70515.1| ABC-type uncharacterized transport system, ATPase component [Streptococcus suis JS14] Length = 252 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 6/81 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEA----ARHVLLSCG 58 G FI+ G GAGK+T +++ L + VH+ E AE V Sbjct: 34 QGDFITILGGNGAGKSTLFNVIAGTLPLTSGSVHILGEDVTNWPAEKRAKYLSRVFQDPK 93 Query: 59 VDEFGAEA--EAIVFAAARLD 77 + E ++ A R + Sbjct: 94 MGTAPRMTVAENLLIAKYRGE 114 >gi|145535542|ref|XP_001453504.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124421226|emb|CAK86107.1| unnamed protein product [Paramecium tetraurelia] Length = 453 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 23/158 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G + G G+G++T L R + TRE L+S V++ Sbjct: 245 RAGRILVI-GPPGSGRSTLAKHLCA---RYGFVYISTRE-------------LISNLVNQ 287 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + + D V++ I AL++ +I D Y + L++L Sbjct: 288 KGTTGKEAFEKINKGDLVDDRIINALIKERINQTD---CQLQGYVLDGYPKTQQQLETLN 344 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACL 159 E++ + P +I+D DI L+R+ R + S + Sbjct: 345 ELN---IQPTLIVIIDATDDIVLRRLTQRRTDPISGRI 379 >gi|33862146|ref|NP_893707.1| bifunctional pantoate ligase/cytidylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81575560|sp|Q7UZR6|PANCY_PROMP RecName: Full=Bifunctional pantoate ligase/cytidylate kinase; Includes: RecName: Full=Pantoate--beta-alanine ligase; AltName: Full=Pantoate-activating enzyme; AltName: Full=Pantothenate synthetase; Includes: RecName: Full=Cytidylate kinase; Short=CK; AltName: Full=Cytidine monophosphate kinase; Short=CMP kinase gi|33634364|emb|CAE20049.1| putative bifunctional enzyme; pantothenate synthetase/cytidylate kinase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 510 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 9/29 (31%), Positives = 15/29 (51%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQ 29 M I+ +G G+GK+T L+ + L Sbjct: 279 MKRKPIIAIDGPAGSGKSTITKLIAKELN 307 >gi|327310145|ref|YP_004337042.1| AAA ATPase [Thermoproteus uzoniensis 768-20] gi|326946624|gb|AEA11730.1| AAA ATPase [Thermoproteus uzoniensis 768-20] Length = 299 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 18/64 (28%), Gaps = 3/64 (4%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G +GKTT + R V V G L + + Sbjct: 42 ITIIGPTRSGKTTLAKKIA---SRSGKKVVVMDWNGEYSLGLKINASKLKLDISNINKKI 98 Query: 67 EAIV 70 A + Sbjct: 99 LAEL 102 >gi|228927991|ref|ZP_04091036.1| hypothetical protein bthur0010_26940 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228831681|gb|EEM77273.1| hypothetical protein bthur0010_26940 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 282 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|228946551|ref|ZP_04108866.1| hypothetical protein bthur0007_26950 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813164|gb|EEM59470.1| hypothetical protein bthur0007_26950 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 282 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|297560716|ref|YP_003679690.1| daunorubicin resistance ABC transporter ATPase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845164|gb|ADH67184.1| daunorubicin resistance ABC transporter ATPase subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 334 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 71/221 (32%), Gaps = 33/221 (14%) Query: 11 GIEGAGKTTHISLLKRFL-QRKNYDVHVTREPGGTPAAEAARHVL-----LSCGVDEFGA 64 G GAGKTT + L L + V + PA R L + + Sbjct: 38 GPNGAGKTTLVHCLSTLLVPDRGTAVVDGHDVRTDPAG--VRSSLALTGQFAAVDEVLTG 95 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 A ++FA L DRF S A S + +++ Sbjct: 96 RANLMLFARLLRLPRARARARVGE-----LLDRFGLSDAADASVGSYSGGMRRRL--DLA 148 Query: 125 VQEV--MPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR 182 + P ++LD GL + R L + ER+D +L+ A Sbjct: 149 ASLIVERP--VLVLD-EPTTGLD-PRTRGDLWNAVR----ERRDAGTTVLLTTQYLEEAD 200 Query: 183 NQPDRCHIVD-----SAHSFQSVATNILNIVWELVQKRVSP 218 DR +VD + S + + + V E+ RV P Sbjct: 201 RLADRVVVVDRGGLVAEGSPEQLKARVGGSVCEV---RVPP 238 >gi|261855328|ref|YP_003262611.1| flagellar biosynthetic protein FlhF [Halothiobacillus neapolitanus c2] gi|261835797|gb|ACX95564.1| flagellar biosynthetic protein FlhF [Halothiobacillus neapolitanus c2] Length = 485 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 16/100 (16%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV 59 M G+F +F G G GKTT ++ + + + D Sbjct: 266 MQGGMF-AFIGPTGVGKTTTLAKIAAQAVLAHGRDSVALITTDRFRIG----------AQ 314 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCD 96 ++ A + + A H+ ++ PA+ +++L D Sbjct: 315 EQLRNYARILNIPLHVARDEQHLAELL-PAVSSKRLVLID 353 >gi|220931882|ref|YP_002508790.1| cytidylate kinase [Halothermothrix orenii H 168] gi|219993192|gb|ACL69795.1| cytidylate kinase [Halothermothrix orenii H 168] Length = 228 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 17/28 (60%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD 34 I+ +G GAGK+T LL R L+ + D Sbjct: 5 IAIDGPAGAGKSTLARLLARKLKYRYLD 32 >gi|219855014|ref|YP_002472136.1| hypothetical protein CKR_1671 [Clostridium kluyveri NBRC 12016] gi|219568738|dbj|BAH06722.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 211 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 29/145 (20%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 +G+ I F G+ G+GK+T S L+ L + LL Sbjct: 38 QNGILIWFTGLSGSGKSTIASELEMRLYNMGRLTY-----------------LLDGDNVR 80 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 G + R++++ +C F+DS S D ++ Sbjct: 81 HGLNSNLGFTKEDRIENIRRTAE---------VCKLFVDSGIITISTFISPFKDDRDKVR 131 Query: 122 EISVQEVMPDCTIILDLPVDIGLKR 146 ++ ++ + + +D P+++ R Sbjct: 132 KLLGKDFVE---VYVDCPLEVCESR 153 >gi|217965104|ref|YP_002350782.1| spermidine/putrescine import ATP-binding protein PotA [Listeria monocytogenes HCC23] gi|290893769|ref|ZP_06556749.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J2-071] gi|217334374|gb|ACK40168.1| spermidine/putrescine import ATP-binding protein PotA [Listeria monocytogenes HCC23] gi|290556718|gb|EFD90252.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL J2-071] gi|307570336|emb|CAR83515.1| spermidine/putrescine ABC transporter, ATP-binding protein [Listeria monocytogenes L99] Length = 366 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60 >gi|156355406|ref|XP_001623659.1| predicted protein [Nematostella vectensis] gi|156210380|gb|EDO31559.1| predicted protein [Nematostella vectensis] Length = 389 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 2/99 (2%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G GKTT + + F + + V E + L ++ Sbjct: 17 VVLTGGPCGGKTTTQARMSTFFENIGWKVFRVPETATILLGGGVKFAELDG--EQVNIFQ 74 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAY 105 E ++ +L+ + + +++CDR AY Sbjct: 75 ENLLKTMMQLEKTYFDLAERCHKNCLVICDRGTMDPSAY 113 >gi|158313772|ref|YP_001506280.1| adenylate kinase [Frankia sp. EAN1pec] gi|158109177|gb|ABW11374.1| adenylate kinase [Frankia sp. EAN1pec] Length = 199 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 38/215 (17%), Positives = 59/215 (27%), Gaps = 40/215 (18%) Query: 8 SFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA---EAARHVLLSCGVDEFGA 64 G GAGK T + + R T + + R E Sbjct: 4 VLLGPPGAGKGTQAARISA---RHGVPAISTGQLFDQQISAGSPLGRRAEHYVRAGELVP 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEIS 124 + + A RL + L++G R Q LD + + Sbjct: 61 DEIVLDMVAERLATGIDCEVGFLLDGF----------------PRTLPQAEALDRM-LTA 103 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQ 184 + + LD+ L R+ R SL E D + +R ++F + Sbjct: 104 TCGPL-HLVLDLDVDETEVLARI-GRRSLSEGRLDD-----NQETARRRLKVFAE--ETA 154 Query: 185 PDR--------CHIVDSAHSFQSVATNILNIVWEL 211 P R VD VA I I+ Sbjct: 155 PLRSHYAEQGLLRTVDGTGMPDEVAARIEEILAAA 189 >gi|30262908|ref|NP_845285.1| hypothetical protein BA_2949 [Bacillus anthracis str. Ames] gi|47528241|ref|YP_019590.1| hypothetical protein GBAA_2949 [Bacillus anthracis str. 'Ames Ancestor'] gi|49185745|ref|YP_028997.1| hypothetical protein BAS2739 [Bacillus anthracis str. Sterne] gi|65320222|ref|ZP_00393181.1| COG0125: Thymidylate kinase [Bacillus anthracis str. A2012] gi|165868918|ref|ZP_02213578.1| hypothetical protein BAC_2977 [Bacillus anthracis str. A0488] gi|167631948|ref|ZP_02390275.1| hypothetical protein BAH_3018 [Bacillus anthracis str. A0442] gi|167637675|ref|ZP_02395954.1| hypothetical protein BAQ_3001 [Bacillus anthracis str. A0193] gi|170685267|ref|ZP_02876491.1| hypothetical protein BAM_3013 [Bacillus anthracis str. A0465] gi|170704792|ref|ZP_02895258.1| hypothetical protein BAK_3050 [Bacillus anthracis str. A0389] gi|177649644|ref|ZP_02932646.1| hypothetical protein BAO_2958 [Bacillus anthracis str. A0174] gi|190565099|ref|ZP_03018020.1| hypothetical protein BATI_2848 [Bacillus anthracis Tsiankovskii-I] gi|196032301|ref|ZP_03099715.1| hypothetical protein BCW_2852 [Bacillus cereus W] gi|227814247|ref|YP_002814256.1| hypothetical protein BAMEG_1655 [Bacillus anthracis str. CDC 684] gi|229122487|ref|ZP_04251700.1| hypothetical protein bcere0016_27820 [Bacillus cereus 95/8201] gi|229604246|ref|YP_002867198.1| hypothetical protein BAA_3002 [Bacillus anthracis str. A0248] gi|254685505|ref|ZP_05149365.1| hypothetical protein BantC_16840 [Bacillus anthracis str. CNEVA-9066] gi|254722912|ref|ZP_05184700.1| hypothetical protein BantA1_10624 [Bacillus anthracis str. A1055] gi|254737961|ref|ZP_05195664.1| hypothetical protein BantWNA_22619 [Bacillus anthracis str. Western North America USA6153] gi|254742865|ref|ZP_05200550.1| hypothetical protein BantKB_17942 [Bacillus anthracis str. Kruger B] gi|254752278|ref|ZP_05204314.1| hypothetical protein BantV_07411 [Bacillus anthracis str. Vollum] gi|254760793|ref|ZP_05212817.1| hypothetical protein BantA9_20996 [Bacillus anthracis str. Australia 94] gi|30257541|gb|AAP26771.1| hypothetical protein BA_2949 [Bacillus anthracis str. Ames] gi|47503389|gb|AAT32065.1| hypothetical protein GBAA_2949 [Bacillus anthracis str. 'Ames Ancestor'] gi|49179672|gb|AAT55048.1| hypothetical protein BAS2739 [Bacillus anthracis str. Sterne] gi|164715644|gb|EDR21161.1| hypothetical protein BAC_2977 [Bacillus anthracis str. A0488] gi|167514224|gb|EDR89591.1| hypothetical protein BAQ_3001 [Bacillus anthracis str. A0193] gi|167532246|gb|EDR94882.1| hypothetical protein BAH_3018 [Bacillus anthracis str. A0442] gi|170130593|gb|EDS99454.1| hypothetical protein BAK_3050 [Bacillus anthracis str. A0389] gi|170670627|gb|EDT21366.1| hypothetical protein BAM_3013 [Bacillus anthracis str. A0465] gi|172084718|gb|EDT69776.1| hypothetical protein BAO_2958 [Bacillus anthracis str. A0174] gi|190564416|gb|EDV18380.1| hypothetical protein BATI_2848 [Bacillus anthracis Tsiankovskii-I] gi|195995052|gb|EDX59006.1| hypothetical protein BCW_2852 [Bacillus cereus W] gi|227003213|gb|ACP12956.1| hypothetical protein BAMEG_1655 [Bacillus anthracis str. CDC 684] gi|228661048|gb|EEL16675.1| hypothetical protein bcere0016_27820 [Bacillus cereus 95/8201] gi|229268654|gb|ACQ50291.1| hypothetical protein BAA_3002 [Bacillus anthracis str. A0248] Length = 282 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|331090178|ref|ZP_08339066.1| hypothetical protein HMPREF1025_02649 [Lachnospiraceae bacterium 3_1_46FAA] gi|330402124|gb|EGG81696.1| hypothetical protein HMPREF1025_02649 [Lachnospiraceae bacterium 3_1_46FAA] Length = 184 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 39/210 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M SG I G G GKTT +++ + VH+ + ++ A L + Sbjct: 1 MKSGRIIVITGAPGTGKTTTSAIVAKE-STMEKSVHMHTDDFYHYLSKGAIPPHLPESNE 59 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD-S 119 + EA + AA R + G ++ D FL+ Sbjct: 60 QNLIVIEAFLEAAKR----------YVRGGYDVIVD-------------GIIGPWFLEPW 96 Query: 120 LQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLD 179 L I + I+L + +KR R + LD + ++ + E + F + Sbjct: 97 LN-IVREGYEVHY-IVLRANKEETMKRAIER------SKLDR--KTNIELVEIMWEQFNN 146 Query: 180 IARNQPDRCHIVDSAH-SFQSVATNILNIV 208 + + + I+D+ S + + I V Sbjct: 147 LGAYEKN---ILDTTQLSVEDTVSAIKEKV 173 >gi|323485039|ref|ZP_08090392.1| hypothetical protein HMPREF9474_02143 [Clostridium symbiosum WAL-14163] gi|323401595|gb|EGA93940.1| hypothetical protein HMPREF9474_02143 [Clostridium symbiosum WAL-14163] Length = 372 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 + G FI F G G GKTT + ++ Sbjct: 33 IKRGEFIVFVGPSGCGKTTLLRMIA 57 >gi|315605985|ref|ZP_07881016.1| ferric (Fe+3) ABC superfamily ATP binding cassette transporter, ABC protein [Actinomyces sp. oral taxon 180 str. F0310] gi|315312267|gb|EFU60353.1| ferric (Fe+3) ABC superfamily ATP binding cassette transporter, ABC protein [Actinomyces sp. oral taxon 180 str. F0310] Length = 251 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 18/97 (18%) Query: 11 GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPGGTPAAEAARHV-LLSCGVDEF 62 G GAGK+T ++++ R L + +V T+ +AE AR + +L Sbjct: 34 GPNGAGKSTLLTMIGRLLDIDEGVIEVGGLNVATTK------SAELARTLSILRQENHYI 87 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFL 99 + + R H + P E + DR++ Sbjct: 88 SRLTVRQLVSFGRFPHTRGRLTPQDEE----IIDRYI 120 >gi|309812445|ref|ZP_07706200.1| adenylate kinase [Dermacoccus sp. Ellin185] gi|308433750|gb|EFP57627.1| adenylate kinase [Dermacoccus sp. Ellin185] Length = 192 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 61/222 (27%), Gaps = 44/222 (19%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARHVLLSCG 58 I G GAGK T L + D+ T T + +L S G Sbjct: 2 RLIIL-GPPGAGKGTQAERLAE---SRGIPHISTGDIFRTNIKNETELGLKVKDILASGG 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPAL--MEGKILLCDRFLDSSYAYQGERDSSQHLF 116 E + D + G+++ A + + Sbjct: 58 YVTDEITNEIVKNRLDEADAANGFLLDGYPRTAGQVV----------ALEEMLAAKGQAL 107 Query: 117 LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE--RKDVMIHEKRR 174 +L+ L + + ++R+ R D E R+ ++ R Sbjct: 108 DAALE--------------LTVDGEELVQRLLKRAET-SGRADDTEEVIRERQELY--VR 150 Query: 175 QIFLDIARNQPDR--CHIVDSAHSFQSVATNILNIVWELVQK 214 + +A +R VD S V I + E+ K Sbjct: 151 ET-APLAAAYTERGLLVQVDGMGSIDEVEARINAALDEVAAK 191 >gi|331659267|ref|ZP_08360209.1| hypothetical ATP-binding protein YghS [Escherichia coli TA206] gi|331053849|gb|EGI25878.1| hypothetical ATP-binding protein YghS [Escherichia coli TA206] Length = 237 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + G +++ + R ++ +G +L+ DR+ Sbjct: 77 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRY 126 >gi|307326592|ref|ZP_07605786.1| protein of unknown function DUF344 [Streptomyces violaceusniger Tu 4113] gi|306887786|gb|EFN18778.1| protein of unknown function DUF344 [Streptomyces violaceusniger Tu 4113] Length = 330 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 35/123 (28%), Gaps = 31/123 (25%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG + AGK I L + V +P + Sbjct: 78 IVFEGRDAAGKGGTIKRFTEHLNPRGARVVALEKPTERERGQW----------------- 120 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 + ++H+ G+I+L DR S Y G D Q + Q Sbjct: 121 ----YFQRYVEHLPT-------AGEIVLFDR---SWYNRAGVERVMGFCSQDEYQRFTRQ 166 Query: 127 EVM 129 + Sbjct: 167 APL 169 >gi|265766061|ref|ZP_06094102.1| uridine kinase [Bacteroides sp. 2_1_16] gi|263253729|gb|EEZ25194.1| uridine kinase [Bacteroides sp. 2_1_16] Length = 204 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L I G G+GKTT + + L V + ++ ++ + D A Sbjct: 2 LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 +++ HV L EGK + + + Q E + + ++ I Sbjct: 61 FEWSLL-----SKHVA-----LLKEGKCIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 110 Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ +M D I +D D L RV R + + Sbjct: 111 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVVERGRTAE 151 >gi|257063253|ref|YP_003142925.1| hypothetical protein Shel_05170 [Slackia heliotrinireducens DSM 20476] gi|256790906|gb|ACV21576.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM 20476] Length = 436 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 10/124 (8%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 + G AGK+T +S ++ + Y V E A E + D + Sbjct: 79 VVITGGPCAGKSTAMSWVQNAFTQMGYVVLFVPE----TATELITGGVAPWTCDSNSSYQ 134 Query: 67 EAIVFAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 + + + V + K+ ++CDR + AY F +L+ Sbjct: 135 KCQLRLQFEKEKVFEQAAETMDADKVLIVCDRGTMDNKAYM-----DDLEFAQALEHFGT 189 Query: 126 QEVM 129 EV Sbjct: 190 NEVQ 193 >gi|134096064|ref|YP_001101139.1| signal recognition particle receptor [Herminiimonas arsenicoxydans] gi|133739967|emb|CAL63018.1| Cell division protein FtsY homolog [Herminiimonas arsenicoxydans] Length = 408 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV 37 + I+ G+ GAGKTT I L + LQ + V + Sbjct: 211 MMIT--GVNGAGKTTTIGKLAKHLQAHHQSVLL 241 >gi|126139661|ref|XP_001386353.1| Adenylyl-sulfate kinase (APS kinase) (Adenosine-5'phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) [Scheffersomyces stipitis CBS 6054] gi|126093635|gb|ABN68324.1| Adenylyl-sulfate kinase (APS kinase) (Adenosine-5'phosphosulfate kinase) (ATP adenosine-5'-phosphosulfate 3'-phosphotransferase) [Scheffersomyces stipitis CBS 6054] Length = 199 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ +GK+T L++ + + + + L FG + Sbjct: 31 GLSASGKSTIACALEQSILARGLNAYR-----------------LDGDNVRFGLNKDLGF 73 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 A R +++ + A + F DS S D +++ ++ +P Sbjct: 74 SEADRNENIRRISEVAKL---------FTDSCCVTLTSFISPYKQDRDLARQLHEKDNLP 124 Query: 131 DCTIILDLPVDIGLKR 146 + +D+PV++ +R Sbjct: 125 FVEVYVDVPVEVAEQR 140 >gi|169607379|ref|XP_001797109.1| hypothetical protein SNOG_06746 [Phaeosphaeria nodorum SN15] gi|111064277|gb|EAT85397.1| hypothetical protein SNOG_06746 [Phaeosphaeria nodorum SN15] Length = 206 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 33/151 (21%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 G I F G+ +GK+T + L++ L Y + L Sbjct: 22 QKGFTIWFTGLSASGKSTIATALEQHLLHLGYAAYR-----------------LDGDNVR 64 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERD--SSQHLFLD 118 FG + R +++ + A + F DSS A + Sbjct: 65 FGLNKDLGFTEKDRNENIRRIAEVAKL---------FADSSTIAITSFISPYKADRATAR 115 Query: 119 SLQEISVQEVMPDCTI---ILDLPVDIGLKR 146 L ++ P +D+P+++ R Sbjct: 116 DLHAVTTGSDEP-LAFVEVFVDIPLEVAEAR 145 >gi|326777523|ref|ZP_08236788.1| daunorubicin resistance ABC transporter ATPase subunit [Streptomyces cf. griseus XylebKG-1] gi|326657856|gb|EGE42702.1| daunorubicin resistance ABC transporter ATPase subunit [Streptomyces cf. griseus XylebKG-1] Length = 377 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 71/220 (32%), Gaps = 56/220 (25%) Query: 11 GIEGAGKTTHISLLKRFL-------QRKNYDVHVTREPG--GTPAAEAARHVLLSCGVDE 61 G GAGKTT + +L L + DV REP + A ++ + G Sbjct: 55 GPNGAGKTTAVRVLATLLRYDAGRAEVAGLDV--AREPRRVRSRIGLAGQYAAVDEG--- 109 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 +F RL H+ N R G+ L DRF + A +G ++ S L Sbjct: 110 LTGRQNLEMF--GRLFHLGNR-RARQRAGE--LLDRFDLAEAADKGAKEYSGG-MRRRLD 163 Query: 122 EISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ------ 175 S + PD + LD GL R + E R Sbjct: 164 LASSMILQPD-VLFLD-EPTTGL-------DPRGRG----------EVWEAVRALVAGGT 204 Query: 176 ------IFLDIARNQPDRCHIVD-----SAHSFQSVATNI 204 +LD A R ++D + + ++ + Sbjct: 205 TVLLTTQYLDEADKLASRVTVIDRGRAIADDTPDALKNRV 244 >gi|255690694|ref|ZP_05414369.1| putative conjugative transposon protein TraA [Bacteroides finegoldii DSM 17565] gi|260623725|gb|EEX46596.1| putative conjugative transposon protein TraA [Bacteroides finegoldii DSM 17565] Length = 218 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 29/83 (34%), Gaps = 2/83 (2%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G GKTT +L +L + Y V R D ++ A Sbjct: 14 GVGKTTLCALFASYLAERGYPVIAIDADLQASLYRH-RQREKDVAPDVQAPWNVDLLDTA 72 Query: 74 ARLDHVENVIRPALMEGKILLCD 96 + DH++NV+ I+L D Sbjct: 73 -KGDHLKNVMSKLKTVPGIVLID 94 >gi|242309386|ref|ZP_04808541.1| shikimate kinase [Helicobacter pullorum MIT 98-5489] gi|239523957|gb|EEQ63823.1| shikimate kinase [Helicobacter pullorum MIT 98-5489] Length = 163 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHI-V 191 LD+ + L R+ + E + F+ KD +++L + D H + Sbjct: 96 VFFLDIDFENILSRL----NDNEVSTRPLFQDKDKAF-----KLYLQRLQIYKDSAHFCI 146 Query: 192 DSAHSFQSVATNILNIV 208 ++ ++ ILN + Sbjct: 147 NANADIPTITKEILNSL 163 >gi|191172555|ref|ZP_03034095.1| putative lipoprotein [Escherichia coli F11] gi|190907223|gb|EDV66822.1| putative lipoprotein [Escherichia coli F11] Length = 232 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 35/111 (31%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 12 IAIVGCDGSGKSTLTASLVNELASRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 71 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + G +++ + R ++ +G +L+ DR+ Sbjct: 72 KAAHVHEKPSTPPGNITALVIYLLSCWRAYKFRKMLCKN-QQGYLLITDRY 121 >gi|192289252|ref|YP_001989857.1| sulfate adenylyltransferase, large subunit [Rhodopseudomonas palustris TIE-1] gi|192283001|gb|ACE99381.1| sulfate adenylyltransferase, large subunit [Rhodopseudomonas palustris TIE-1] Length = 636 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 19/87 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GKTT L+R L + G+P +LL G ++ Sbjct: 459 FTGLPGSGKTTIARALERRLFDRG----------GSP-------ILLDGDTLRAGLNSDL 501 Query: 69 IVFAAARLDHVENV--IRPALMEGKIL 93 A R +++ + I L + Sbjct: 502 GFSPADRAENIRRLGEIAAHLAANGHI 528 >gi|146325073|sp|Q92DL6|POTA_LISIN RecName: Full=Spermidine/putrescine import ATP-binding protein PotA Length = 366 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60 >gi|146311434|ref|YP_001176508.1| ABC transporter related [Enterobacter sp. 638] gi|145318310|gb|ABP60457.1| amino acid ABC transporter ATP-binding protein, PAAT family [Enterobacter sp. 638] Length = 271 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 ++ G G+GK+T I L+ + ++ + +P A R + Sbjct: 52 VAILGPSGSGKSTLIRLINQLESLNGGEILIDNKPTRALTGTALRQL 98 >gi|116812171|dbj|BAF35979.1| ATP sulfurylase/APS kinase [Molgula tectiformis] Length = 611 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 7/65 (10%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G I F G+ GAGKTT L+ FL K P + + RH L Sbjct: 37 RGCTIWFTGLSGAGKTTVAMKLEEFLCSKGI-------PAYSLDGDNIRHGLNKDLGFSP 89 Query: 63 GAEAE 67 E Sbjct: 90 DDREE 94 >gi|109157291|pdb|2CDN|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Adenylate Kinase Complexed With Two Molecules Of Adp And Mg Length = 201 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 58/210 (27%), Gaps = 49/210 (23%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-----HVLLSCGVDEFGAE 65 G GAGK T L L T E E + L G Sbjct: 27 GPPGAGKGTQAVKLAEKL---GIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDL 83 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124 +V + + P G + D + S +L E + Sbjct: 84 TNELVD--------DRLNNPDAANGF--ILDGYPRS------------VEQAKALHEMLE 121 Query: 125 VQEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC--LDYFERKDVMIHEKRRQIFLD--- 179 + D + + ++ L+R++ R ++ L+ +++ D Sbjct: 122 RRGTDIDAVLEFRVSEEVLLERLKGRGRADDTDDVILNRM------------KVYRDETA 169 Query: 180 -IARNQPDRCHIVDSAHSFQSVATNILNIV 208 + D+ VD+ + V L + Sbjct: 170 PLLEYYRDQLKTVDAVGTMDEVFARALRAL 199 >gi|28896418|ref|NP_802768.1| dephospho-CoA kinase [Streptococcus pyogenes SSI-1] gi|28811669|dbj|BAC64601.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 203 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 30/229 (13%), Positives = 72/229 (31%), Gaps = 44/229 (19%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNY------DVHVTREPGGTPAAEAARH--- 52 + I G +GK+T + ++ ++ Y V + G EA R Sbjct: 4 KKTMIIGITGGIASGKSTVVKVI----RKAGYQVIDADQVVHDLQEKGGRLYEALREAFG 59 Query: 53 --VLLSCGVDEFGAEAEAIVFAAARLDH----VENVIRPALMEGKILLCDRFLDSSYAYQ 106 +L + G + +E + + +I+ L + + Sbjct: 60 NQILKADGELDRTKLSEMLFSNPDNMATSSAIQNQIIKEELAAKRD------------HL 107 Query: 107 GERDSSQHLFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKD 166 + + + + L E+ Q+ D ++ + L+R+ R L + + Sbjct: 108 AQSQAIFFMDIPLLMELGYQDWF-DAIWLVYVDAQTQLQRLMARNRLDKGKARQRIASQ- 165 Query: 167 VMIHEKRRQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKR 215 L I +P ++D+ +++ + + + L R Sbjct: 166 -----------LPIEEKKPYASLVIDNNGDMETLIKQVQSALLSLANPR 203 >gi|16132090|ref|NP_418689.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12 substr. MG1655] gi|89110984|ref|AP_004764.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12 substr. W3110] gi|170083707|ref|YP_001733027.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12 substr. DH10B] gi|218692654|ref|YP_002400866.1| D-gluconate kinase [Escherichia coli ED1a] gi|218702971|ref|YP_002410600.1| D-gluconate kinase [Escherichia coli IAI39] gi|218707874|ref|YP_002415393.1| D-gluconate kinase [Escherichia coli UMN026] gi|238903369|ref|YP_002929165.1| D-gluconate kinase, thermosensitive [Escherichia coli BW2952] gi|253775109|ref|YP_003037940.1| D-gluconate kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164193|ref|YP_003047303.1| D-gluconate kinase [Escherichia coli B str. REL606] gi|293402893|ref|ZP_06646990.1| thermosensitive gluconokinase [Escherichia coli FVEC1412] gi|298378419|ref|ZP_06988303.1| gluconokinase [Escherichia coli FVEC1302] gi|300899418|ref|ZP_07117673.1| shikimate kinase [Escherichia coli MS 198-1] gi|300906116|ref|ZP_07123835.1| shikimate kinase [Escherichia coli MS 84-1] gi|301028108|ref|ZP_07191385.1| shikimate kinase [Escherichia coli MS 196-1] gi|301304679|ref|ZP_07210787.1| shikimate kinase [Escherichia coli MS 124-1] gi|301643384|ref|ZP_07243434.1| shikimate kinase [Escherichia coli MS 146-1] gi|309792909|ref|ZP_07687337.1| shikimate kinase [Escherichia coli MS 145-7] gi|312965985|ref|ZP_07780211.1| thermosensitive gluconokinase [Escherichia coli 2362-75] gi|729610|sp|P39208|IDNK_ECOLI RecName: Full=Thermosensitive gluconokinase; AltName: Full=Gluconate kinase 1 gi|537110|gb|AAA97165.1| gluconate kinase [Escherichia coli str. K-12 substr. MG1655] gi|1790719|gb|AAC77225.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12 substr. MG1655] gi|85677015|dbj|BAE78265.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K12 substr. W3110] gi|169891542|gb|ACB05249.1| D-gluconate kinase, thermosensitive [Escherichia coli str. K-12 substr. DH10B] gi|218372957|emb|CAR20838.1| D-gluconate kinase, thermosensitive [Escherichia coli IAI39] gi|218430218|emb|CAR11077.1| D-gluconate kinase, thermosensitive [Escherichia coli ED1a] gi|218434971|emb|CAR15912.1| D-gluconate kinase, thermosensitive [Escherichia coli UMN026] gi|222036040|emb|CAP78785.1| Thermosensitive gluconokinase [Escherichia coli LF82] gi|238860755|gb|ACR62753.1| D-gluconate kinase, thermosensitive [Escherichia coli BW2952] gi|242379787|emb|CAQ34615.1| D-gluconate kinase, thermosensitive [Escherichia coli BL21(DE3)] gi|253326153|gb|ACT30755.1| carbohydrate kinase, thermoresistant glucokinase family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253976096|gb|ACT41767.1| D-gluconate kinase, thermosensitive [Escherichia coli B str. REL606] gi|253980252|gb|ACT45922.1| D-gluconate kinase, thermosensitive [Escherichia coli BL21(DE3)] gi|260450912|gb|ACX41334.1| carbohydrate kinase, thermoresistant glucokinase family [Escherichia coli DH1] gi|291429808|gb|EFF02822.1| thermosensitive gluconokinase [Escherichia coli FVEC1412] gi|298280753|gb|EFI22254.1| gluconokinase [Escherichia coli FVEC1302] gi|299878805|gb|EFI87016.1| shikimate kinase [Escherichia coli MS 196-1] gi|300356996|gb|EFJ72866.1| shikimate kinase [Escherichia coli MS 198-1] gi|300402059|gb|EFJ85597.1| shikimate kinase [Escherichia coli MS 84-1] gi|300840029|gb|EFK67789.1| shikimate kinase [Escherichia coli MS 124-1] gi|301078214|gb|EFK93020.1| shikimate kinase [Escherichia coli MS 146-1] gi|308123195|gb|EFO60457.1| shikimate kinase [Escherichia coli MS 145-7] gi|312289228|gb|EFR17122.1| thermosensitive gluconokinase [Escherichia coli 2362-75] gi|312948921|gb|ADR29748.1| D-gluconate kinase [Escherichia coli O83:H1 str. NRG 857C] gi|315138819|dbj|BAJ45978.1| thermosensitive gluconokinase [Escherichia coli DH1] gi|315255627|gb|EFU35595.1| shikimate kinase [Escherichia coli MS 85-1] gi|323950663|gb|EGB46541.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli H252] gi|323975389|gb|EGB70490.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli TW10509] gi|324005141|gb|EGB74360.1| shikimate kinase [Escherichia coli MS 57-2] gi|327250214|gb|EGE61933.1| thermosensitive gluconokinase [Escherichia coli STEC_7v] Length = 187 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + LD + L R+Q R L FE L+ + + Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149 Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216 D H +V V + Q R+ Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174 >gi|148544868|ref|YP_001272238.1| ABC transporter related [Lactobacillus reuteri DSM 20016] gi|184154206|ref|YP_001842547.1| cobalt ABC transporter ATP-binding component [Lactobacillus reuteri JCM 1112] gi|227364008|ref|ZP_03848108.1| ABC superfamily ATP binding cassette transporter ABC protein [Lactobacillus reuteri MM2-3] gi|325683213|ref|ZP_08162729.1| ABC superfamily ATP binding cassette transporter ABC protein [Lactobacillus reuteri MM4-1A] gi|148531902|gb|ABQ83901.1| ABC transporter related [Lactobacillus reuteri DSM 20016] gi|183225550|dbj|BAG26067.1| cobalt ABC transporter ATP-binding component [Lactobacillus reuteri JCM 1112] gi|227070930|gb|EEI09253.1| ABC superfamily ATP binding cassette transporter ABC protein [Lactobacillus reuteri MM2-3] gi|324977563|gb|EGC14514.1| ABC superfamily ATP binding cassette transporter ABC protein [Lactobacillus reuteri MM4-1A] Length = 460 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G+ G+GK+T + L+ L + ++ P + L+ +D E E Sbjct: 36 GVSGSGKSTILKLIAGLLPKYGGEIVTGAVDVPTDAQIGMVFQDPLMQFALDTPRHELEF 95 Query: 69 IVFAAAR-LDHVENVIRPALMEGKI 92 + D + ++ AL GK+ Sbjct: 96 TLENCQVPTDKIPERVKEALQFGKV 120 >gi|157163743|ref|YP_001461061.1| D-gluconate kinase [Escherichia coli HS] gi|307312957|ref|ZP_07592585.1| carbohydrate kinase, thermoresistant glucokinase family [Escherichia coli W] gi|157069423|gb|ABV08678.1| thermosensitive gluconokinase [Escherichia coli HS] gi|306907125|gb|EFN37632.1| carbohydrate kinase, thermoresistant glucokinase family [Escherichia coli W] gi|315063575|gb|ADT77902.1| D-gluconate kinase, thermosensitive [Escherichia coli W] gi|320200602|gb|EFW75188.1| Gluconokinase [Escherichia coli EC4100B] gi|323380345|gb|ADX52613.1| carbohydrate kinase, thermoresistant glucokinase family [Escherichia coli KO11] Length = 187 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + LD + L R+Q R L FE L+ + + Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 149 Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216 D H +V V + Q R+ Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174 >gi|157825358|ref|YP_001493078.1| Signal recognition particle protein [Rickettsia akari str. Hartford] gi|157799316|gb|ABV74570.1| Signal recognition particle protein [Rickettsia akari str. Hartford] Length = 449 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQEQLAIL 152 >gi|332042789|gb|EGI78989.1| deoxynucleoside kinase [Lacinutrix algicola 5H-3-7-4] Length = 204 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 34/190 (17%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAI--VF 71 GAGKTT LL + + + + L ++ + + F Sbjct: 10 GAGKTTLTKLLAKHYK------------WEAQLEDVVDNPYLDDFYNQMERWSFNLQVYF 57 Query: 72 AAARLDHVENVIRPALMEGKILLCDR--FLDS-----SYAYQGERDSSQHLFLDSLQEIS 124 +R V + GK ++ DR + D+ + G + SL E+ Sbjct: 58 LNSRFRQVAQI----RESGKEIIQDRTIYEDAHIFAPNLHAMGLMTNRDFENYSSLFELM 113 Query: 125 VQEVM-PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARN 183 V PD I L + N S DY + + + + Sbjct: 114 EGFVQGPDLLIYL-------RSSISNLVSQIHKRGRDYENSISIDYLSRLNERYEAWIHG 166 Query: 184 Q-PDRCHIVD 192 + I+D Sbjct: 167 YNKGKLLIID 176 >gi|266622808|ref|ZP_06115743.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein [Clostridium hathewayi DSM 13479] gi|288865433|gb|EFC97731.1| SN-glycerol-3-phosphate ABC transporter, ATP-binding protein [Clostridium hathewayi DSM 13479] Length = 372 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 + G FI F G G GKTT + ++ Sbjct: 33 IKRGEFIVFVGPSGCGKTTLLRMIA 57 >gi|170055096|ref|XP_001863429.1| KTI12 [Culex quinquefasciatus] gi|167875173|gb|EDS38556.1| KTI12 [Culex quinquefasciatus] Length = 281 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 11/91 (12%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G+ +GK+T + +K + VH+ E A ++ E Sbjct: 3 LVVISGLPASGKSTRAAQIKAHFEGLGKTVHIVSERDCIRVAGYEKNEYFRDSQKEKLVR 62 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + V++ + L + +L+ D Sbjct: 63 S-----------SVKSHVLRLLNKNDLLIID 82 >gi|163757350|ref|ZP_02164439.1| putative cell division protein [Hoeflea phototrophica DFL-43] gi|162284852|gb|EDQ35134.1| putative cell division protein [Hoeflea phototrophica DFL-43] Length = 529 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 18/133 (13%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L L V + G T A A L D G++ + Sbjct: 332 GVNGTGKTTTIGKLAAKLHSGGLKVTLAA--GDTFRAAAIEQ--LKIWGDRTGSKVVSTK 387 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQEV 128 A A +G +L +D+ R ++ +D L ++ + ++ Sbjct: 388 LGADAAGLAYEAFETARADGADVLI---IDT-----AGRLQNRTELMDELAKVVRVIGKL 439 Query: 129 MPDC--TII--LD 137 PD T++ LD Sbjct: 440 DPDAPHTVLQTLD 452 >gi|224499673|ref|ZP_03668022.1| hypothetical protein LmonF1_08244 [Listeria monocytogenes Finland 1988] gi|254830205|ref|ZP_05234860.1| hypothetical protein Lmon1_02552 [Listeria monocytogenes 10403S] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|119467388|ref|XP_001257500.1| multidrug resistance protein 1, 2, 3 (p glycoprotein 1, 2, 3) [Neosartorya fischeri NRRL 181] gi|119405652|gb|EAW15603.1| multidrug resistance protein 1, 2, 3 (p glycoprotein 1, 2, 3) [Neosartorya fischeri NRRL 181] Length = 1272 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 17/24 (70%) Query: 4 GLFISFEGIEGAGKTTHISLLKRF 27 G F++F G G GK+T I+LL RF Sbjct: 1051 GKFVAFVGPSGCGKSTMINLLARF 1074 >gi|44836|emb|CAA32144.1| unnamed protein product [Neisseria gonorrhoeae] Length = 356 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/27 (44%), Positives = 16/27 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHV 37 GI GAGKTT I L ++ Q + V + Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLL 250 >gi|191168714|ref|ZP_03030493.1| thermosensitive gluconokinase [Escherichia coli B7A] gi|237703944|ref|ZP_04534425.1| thermosensitive gluconokinase [Escherichia sp. 3_2_53FAA] gi|301024313|ref|ZP_07188003.1| shikimate kinase [Escherichia coli MS 69-1] gi|331665937|ref|ZP_08366831.1| shikimate kinase [Escherichia coli TA143] gi|190901262|gb|EDV61032.1| thermosensitive gluconokinase [Escherichia coli B7A] gi|226901856|gb|EEH88115.1| thermosensitive gluconokinase [Escherichia sp. 3_2_53FAA] gi|281181366|dbj|BAI57696.1| D-gluconate kinase [Escherichia coli SE15] gi|300396638|gb|EFJ80176.1| shikimate kinase [Escherichia coli MS 69-1] gi|315288363|gb|EFU47761.1| shikimate kinase [Escherichia coli MS 110-3] gi|323955554|gb|EGB51318.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli H263] gi|323960309|gb|EGB55950.1| thermoresistant glucokinase carbohydrate kinase [Escherichia coli H489] gi|331056988|gb|EGI28982.1| shikimate kinase [Escherichia coli TA143] Length = 187 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + LD + L R+Q R L FE L+ + + Sbjct: 103 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQEDEQDIVRI 149 Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216 D H +V V + Q R+ Sbjct: 150 DINHDIANVTEQCRQAVLAIRQNRI 174 >gi|157828091|ref|YP_001494333.1| signal recognition particle protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165932791|ref|YP_001649580.1| signal recognition particle protein [Rickettsia rickettsii str. Iowa] gi|157800572|gb|ABV75825.1| signal recognition particle protein [Rickettsia rickettsii str. 'Sheila Smith'] gi|165907878|gb|ABY72174.1| signal recognition particle, subunit FFH/SRP54 [Rickettsia rickettsii str. Iowa] Length = 449 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASGKLALRLRNQNKKVLLVSLDTYRPAAQEQLAIL 152 >gi|317154837|ref|YP_004122885.1| adenylylsulfate kinase [Desulfovibrio aespoeensis Aspo-2] gi|316945088|gb|ADU64139.1| adenylylsulfate kinase [Desulfovibrio aespoeensis Aspo-2] Length = 199 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 20/92 (21%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ GAGK+T +++ L + V + G Sbjct: 30 IWFTGLSGAGKSTIAHEVEKTLFDRGMRVK-----------------VFDGDNVRHGLCG 72 Query: 67 EAIVFAAARLD---HVENVIRPALMEGKILLC 95 + AR + + +++ L G I LC Sbjct: 73 DLSFSLEARAENTRRIAEMVKLFLENGTICLC 104 >gi|312968683|ref|ZP_07782892.1| uncharacterized ATP-binding protein yghS [Escherichia coli 2362-75] gi|312286901|gb|EFR14812.1| uncharacterized ATP-binding protein yghS [Escherichia coli 2362-75] Length = 237 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/111 (14%), Positives = 37/111 (33%), Gaps = 20/111 (18%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV------------- 53 I+ G +G+GK+T + L L + H+ E + Sbjct: 17 IAIVGCDGSGKSTLTASLVNELTSRMPTEHIYLGQSSGRIGEWISQLPVIGAPFGRYLRS 76 Query: 54 ----LLSCGVDEFGAEAEAIVFAAA--RLDHVENVIRPALMEGKILLCDRF 98 + + G +++ + R ++ + +G +L+ DR+ Sbjct: 77 KAAHVHEKPLTPPGNITALVIYLLSCWRAYKFRKMLCKS-QQGYLLITDRY 126 >gi|302868575|ref|YP_003837212.1| hypothetical protein Micau_4121 [Micromonospora aurantiaca ATCC 27029] gi|302571434|gb|ADL47636.1| hypothetical protein Micau_4121 [Micromonospora aurantiaca ATCC 27029] Length = 201 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 43/147 (29%), Gaps = 30/147 (20%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 + G G+GKTT +R + + R +L Sbjct: 18 LVIIRGNSGSGKTTAARETRRRF---GRGAALLEQDY------LRRTLLREHDSAHIQPV 68 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A + A AR AL G ++ +G + ++ + L + Sbjct: 69 APTFITATART---------ALDLGYHVIV----------EGILHTERYATV--LHHLID 107 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYS 152 P LD+ D ++R NR Sbjct: 108 WHPGPVAVFYLDVSFDETVRRHLNRDE 134 >gi|257870167|ref|ZP_05649820.1| glycine betaine/L-proline transporter ATP-binding subunit [Enterococcus gallinarum EG2] gi|257804331|gb|EEV33153.1| glycine betaine/L-proline transporter ATP-binding subunit [Enterococcus gallinarum EG2] Length = 403 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSC 57 N G G+ G+GK+T I LL R ++ D+++ E + E R V Sbjct: 51 NEGEIFVIMGLSGSGKSTLIRLLNRLIEPSGGDIYIDGEDIAKMSKEELREVRRHK 106 >gi|225848020|ref|YP_002728183.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643921|gb|ACN98971.1| shikimate kinase [Sulfurihydrogenibium azorense Az-Fu1] Length = 166 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 61/200 (30%), Gaps = 50/200 (25%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GK+T LL R DV E + + G ++ Sbjct: 11 GSGKSTVGKLLADKTSRDFVDVDKLIE---EREKMKIKDIFEKKGE----------LYF- 56 Query: 74 ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCT 133 + + ++ L +++ +++ ++ + Sbjct: 57 --RELEKKYLQELLNTQNLVVST-------------GGGLGADAENMNQMKKNGI----V 97 Query: 134 IILDLPVDIGLKRVQNRYSLR-ESACLDYFERKDVMIHEKRR--QIFLDIARNQPDRCHI 190 I LDL ++ L+R++N + + LD +K +K + Sbjct: 98 IWLDLNLNTILERIKNDENRPLLNQPLDKI-KKLFDERKKVYGLATY------------R 144 Query: 191 VDS-AHSFQSVATNILNIVW 209 +++ + + ILN + Sbjct: 145 INAENKTPFQIVEEILNKIK 164 >gi|39933830|ref|NP_946106.1| putative bifunctional ATP-sulfurylase large subunit/adenylyl sulfate kinase CysN/CysC [Rhodopseudomonas palustris CGA009] gi|39647677|emb|CAE26197.1| putative CysN/CysC bifunctional enzyme, ATP-sulfurylase large subunit and adenylyl sulfate kinase [Rhodopseudomonas palustris CGA009] Length = 636 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 19/87 (21%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GKTT L+R L + G+P +LL G ++ Sbjct: 459 FTGLPGSGKTTIARALERRLFDRG----------GSP-------ILLDGDTLRAGLNSDL 501 Query: 69 IVFAAARLDHVENV--IRPALMEGKIL 93 A R +++ + I L + Sbjct: 502 GFSPADRAENIRRLGEIAAHLAANGHI 528 >gi|86143696|ref|ZP_01062072.1| guanylate kinase [Leeuwenhoekiella blandensis MED217] gi|85829739|gb|EAQ48201.1| guanylate kinase [Leeuwenhoekiella blandensis MED217] Length = 191 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 58/169 (34%), Gaps = 33/169 (19%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRF--------LQRKNYDVHVTREPGGTPAAEAARHVL 54 +G I F G+GKTT + L + + + T + G + + Sbjct: 4 TGKLIVFSAPSGSGKTTIVRWLLEKKELNLEFSISAASREPRPTEKDGVDYYFLSLKEFK 63 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 DEF E + +++ + EGK ++ D Sbjct: 64 RRIKEDEFLEWEEV--YRDNFYGTLKSEVERIWKEGKHVIFD------------------ 103 Query: 115 LFLDSLQEISVQEVMPDCTI-ILDLPVDIGLKRVQNRYSLRESACLDYF 162 +D + + ++++ P+ T+ + P ++ ++ R R++ D Sbjct: 104 --IDVVGGLDIKKLYPERTLAVFVKPP--SIEELKIRLKKRKTESEDRI 148 >gi|325918862|ref|ZP_08180941.1| Bifunctional adenylylsulfate kinase /sulfate adenylyltransferase subunit 1 [Xanthomonas vesicatoria ATCC 35937] gi|325534926|gb|EGD06843.1| Bifunctional adenylylsulfate kinase /sulfate adenylyltransferase subunit 1 [Xanthomonas vesicatoria ATCC 35937] Length = 501 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T +L+ + L Y +L G + Sbjct: 336 FTGLSGAGKSTVANLVDKRLHALGYHTF-----------------ILDGDNVRHGLNRDL 378 Query: 69 IVFAAARLD---HVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++ V V R G I+L S + D + + Sbjct: 379 GFTDEDRVENIRRVAEVARLMADAGLIVLV-----SFISPFRAERQLARERFDQGEFVE- 432 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + +D+P+ + R Sbjct: 433 --------VFVDVPLAVAEAR 445 >gi|325125121|gb|ADY84451.1| ABC transporter, ATP-binding protein [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 236 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 17/24 (70%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL 24 ++ G+FI+ G GAGK+T I+ L Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47 >gi|315281474|ref|ZP_07870092.1| spermidine/putrescine import ATP-binding protein PotA [Listeria marthii FSL S4-120] gi|313614874|gb|EFR88400.1| spermidine/putrescine import ATP-binding protein PotA [Listeria marthii FSL S4-120] Length = 364 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 31 KGKFYTLLGPSGCGKTTILRLIAGFLEA 58 >gi|310659129|ref|YP_003936850.1| iron compound ABC transporter ATP-binding protein [Clostridium sticklandii DSM 519] gi|308825907|emb|CBH21945.1| Iron compound ABC transporter, ATP-binding protein [Clostridium sticklandii] Length = 271 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 G F + G G+GKTT ++ + + V + E Sbjct: 33 KGKFYTILGPNGSGKTTLAKIITKTMDTPKNKVFLLSE 70 >gi|301054457|ref|YP_003792668.1| hypothetical protein BACI_c29040 [Bacillus anthracis CI] gi|300376626|gb|ADK05530.1| conserved hypothetical protein [Bacillus cereus biovar anthracis str. CI] Length = 282 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|297622976|ref|YP_003704410.1| adenylylsulfate kinase [Truepera radiovictrix DSM 17093] gi|297164156|gb|ADI13867.1| adenylylsulfate kinase [Truepera radiovictrix DSM 17093] Length = 209 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ GAGK+T + L+ L + Y + LL G Sbjct: 39 FTGLSGAGKSTVANALEGALHSRGYHTY-----------------LLDGDNVRHGLNKNL 81 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 A R +++ V + + G I+L Sbjct: 82 GFSAEDREENIRRIGEVAKLFVDAGIIVLT 111 >gi|282899839|ref|ZP_06307801.1| Adenylyl-sulfate kinase (CyrN) [Cylindrospermopsis raciborskii CS-505] gi|281195321|gb|EFA70256.1| Adenylyl-sulfate kinase (CyrN) [Cylindrospermopsis raciborskii CS-505] Length = 219 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 20/90 (22%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GKTT L+R L +K + T +L G A+ Sbjct: 51 FTGLSGSGKTTLALELERILFQKGW---YTF--------------VLDGDNIRHGLCADL 93 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLC 95 AA R +++ V + G +++ Sbjct: 94 GFSAADRAENIRRIGEVAKLFADSGCLVIT 123 >gi|255710519|ref|XP_002551543.1| KLTH0A01914p [Lachancea thermotolerans] gi|238932920|emb|CAR21101.1| KLTH0A01914p [Lachancea thermotolerans] Length = 1499 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 15/133 (11%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV----LLSCGVDEFGAEAEAI 69 GAGKTT ++ L + + G A R V E E++ Sbjct: 892 GAGKTTLLNTLAQ--RNVGIITGDMLVNGNHIDASFERRTGYVQQQDVHVKEMTVR-ESL 948 Query: 70 VFAA--ARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ- 126 FAA R V + A +E I + D YA D L ++ +++S+ Sbjct: 949 QFAARMRRPQSVPEAEKMAYVEDIIEILD---MEEYADALVGDVGYGLNVEQRKKVSIGV 1005 Query: 127 --EVMPDCTIILD 137 PD + LD Sbjct: 1006 ELAAKPDLLLFLD 1018 >gi|237743070|ref|ZP_04573551.1| guanylate kinase [Fusobacterium sp. 7_1] gi|229433366|gb|EEO43578.1| guanylate kinase [Fusobacterium sp. 7_1] Length = 185 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 14/28 (50%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL 28 M+ G G GAGK+T L++ L Sbjct: 1 MSLGALYVISGPSGAGKSTVCKLVRERL 28 >gi|228915538|ref|ZP_04079127.1| hypothetical protein bthur0012_27570 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844185|gb|EEM89245.1| hypothetical protein bthur0012_27570 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 282 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|228966121|ref|ZP_04127184.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar sotto str. T04001] gi|228793606|gb|EEM41146.1| Phosphoribulokinase/uridine kinase [Bacillus thuringiensis serovar sotto str. T04001] Length = 219 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 66/196 (33%), Gaps = 27/196 (13%) Query: 7 ISFEGIEG---AGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFG 63 I GI G AGKTT + L L + + T +++ +H ++ Sbjct: 20 IVI-GISGHGAAGKTTFTNRLVNLLNQNEVNYINT--DPYIVSSDIRKHAVIHYTYQNEN 76 Query: 64 AEAEAIVFAAAR--LDHVENVIRPALMEGKILL---CDRFLDSSYAYQGERDSSQHLFLD 118 + A H+ AL ++ D + ++ Y + S + Sbjct: 77 HRYK---MTACHPAAHHLA-----ALERDIHMVRAGIDFYTIDTH-YMKSKLISSENKVT 127 Query: 119 SLQEISVQEVMP---DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ +S + P D I + L R +R A ++Y + HE+RR Sbjct: 128 IVEGMSAAFINPDLFDLKIYFYTDGETELIRRSSRDIAERGADINYLRQS----HEERRI 183 Query: 176 IFLDIARNQPDRCHIV 191 + + R I+ Sbjct: 184 QYEVFMHSYSQRFDII 199 >gi|255082426|ref|XP_002504199.1| type II secretory pathway family [Micromonas sp. RCC299] gi|226519467|gb|ACO65457.1| type II secretory pathway family [Micromonas sp. RCC299] Length = 650 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I F G+ G GK+T++S + +L + + V + T A A + C Sbjct: 444 IVFVGVNGVGKSTNLSKVAYWLLQHDVKVMIAA--CDTFRAGAVEQLRTHCKRLGVPLFE 501 Query: 67 EAIVFAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQE-IS 124 + + I+ A +G +L D R + +L + I+ Sbjct: 502 RG--YEKDPANVASEAIKAAQRQGCDAVLVD---------TAGRMQDNEPLMRALSKLIN 550 Query: 125 VQEVMPDCTII 135 + + PD T+ Sbjct: 551 MND--PDLTLF 559 >gi|225011478|ref|ZP_03701916.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-2A] gi|225003981|gb|EEG41953.1| deoxynucleoside kinase [Flavobacteria bacterium MS024-2A] Length = 204 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 30/226 (13%), Positives = 71/226 (31%), Gaps = 44/226 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I+ G GAGKT+ LL + + + L + + Sbjct: 3 IAIAGNIGAGKTSLTELLAKH------------YNWEAHFEDVIDNPYLDDFYNHMERWS 50 Query: 67 EAI--VFAAARLDHVENVIRPALMEGKILLCDR--FLDS--------SYAYQGERDSSQH 114 + F +R + + K ++ DR + D+ + +RD + + Sbjct: 51 FNLQIYFLKSRFEQL----LSFRENKKTIIQDRTIYEDAHIFAPNLNAMGLMNQRDFNNY 106 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + +L E + PD I L + N + DY + + Sbjct: 107 KGIFNLMESLIDG--PDLLIYL-------RSSIPNLVNKIHKRGRDYENSISIDYLSRLN 157 Query: 175 QIFLDIARN-QPDRCHIVDSAHSFQSV-----ATNILNIVWELVQK 214 + + + I+D + V ++++ ++ + +++ Sbjct: 158 ERYEAWVSTYDAKKIIIIDVD-TLDFVDNKADLSSVIKVIDDKLKQ 202 >gi|224418232|ref|ZP_03656238.1| adenylate kinase [Helicobacter canadensis MIT 98-5491] gi|253827557|ref|ZP_04870442.1| adenylate kinase [Helicobacter canadensis MIT 98-5491] gi|313141765|ref|ZP_07803958.1| adenylate kinase [Helicobacter canadensis MIT 98-5491] gi|253510963|gb|EES89622.1| adenylate kinase [Helicobacter canadensis MIT 98-5491] gi|313130796|gb|EFR48413.1| adenylate kinase [Helicobacter canadensis MIT 98-5491] Length = 190 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 38/217 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M LF+ G G+GKTT ++ + + VH E R + S Sbjct: 1 MKK-LFLVI-GAPGSGKTTDAEIISK--NNSDSMVHY-------STGELLRAEIASGSEL 49 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALME--GKILLCDRFLDSSYAYQGERDSSQHLFLD 118 ++ LD V I A+ I++ D + S Q L Sbjct: 50 GKLIDSFTSKGNLVPLDIVVKTIVDAISNAPKDIVIIDGYPRSVEQMQ-----ELDKILA 104 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFL 178 QEI ++ V + V++ K +R R D E + H + +++L Sbjct: 105 QKQEIILESV---------IEVEVSEKVACDRVLGRARGADDSVE----VFHNRM-KVYL 150 Query: 179 D-IARNQ-----PDRCHIVDSAHSFQSVATNILNIVW 209 + +A Q H ++ + + + + + N + Sbjct: 151 EPLAEIQKFYTSKGILHKINGERTIEEIVSEMENFIK 187 >gi|186511259|ref|NP_001118870.1| ATP binding / nucleobase, nucleoside, nucleotide kinase [Arabidopsis thaliana] Length = 136 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 6/84 (7%) Query: 124 SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIAR- 182 +V + P + D P + +R+ +R RE ++ +++ + E L I Sbjct: 50 NVARIEPAFVLFFDCPEEELERRIMSRNQGREDDNIETIKKRFKVFVEST----LPIISY 105 Query: 183 -NQPDRCHIVDSAHSFQSVATNIL 205 + +++A S + V + Sbjct: 106 YQSKGKLRKINAAKSSEEVFEAVR 129 >gi|167563423|ref|ZP_02356339.1| adenylylsulfate kinase [Burkholderia oklahomensis EO147] Length = 203 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 31/87 (35%), Gaps = 20/87 (22%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT + L L + ++L G ++ Sbjct: 20 GLPGAGKTTTANALLNRL-----------------LGSGVKAIVLDGDTLRTGLCSDLGF 62 Query: 71 FAAARLDHVEN---VIRPALMEGKILL 94 A R++++ V + EG +++ Sbjct: 63 SDADRMENIRRFAHVAKLFQREGYVVI 89 >gi|218904064|ref|YP_002451898.1| hypothetical protein BCAH820_2948 [Bacillus cereus AH820] gi|218535923|gb|ACK88321.1| hypothetical protein BCAH820_2948 [Bacillus cereus AH820] Length = 282 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|118464038|ref|YP_880679.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium avium 104] gi|254774315|ref|ZP_05215831.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium avium subsp. avium ATCC 25291] gi|118165325|gb|ABK66222.1| sulfate adenylytransferase, large subunit/adenylylsulfate kinase [Mycobacterium avium 104] Length = 616 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 20/95 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + F G+ G+GK++ L+++ L K + +L Sbjct: 444 RGKTVWFTGLSGSGKSSVAMLVEQKLLEKGAQAY-----------------VLDGDNLRH 486 Query: 63 GAEAEAIVFAAARLDHVENVIRPA--LME-GKILL 94 G A+ A R +++ + A L + G ++L Sbjct: 487 GLNADLGFSMADRAENLRRLAHVAALLADCGNVVL 521 >gi|187479153|ref|YP_787178.1| hypothetical protein BAV2679 [Bordetella avium 197N] gi|115423740|emb|CAJ50290.1| conserved hypothetical protein [Bordetella avium 197N] Length = 351 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 28/94 (29%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG + AGK I + L + V +P T + Sbjct: 142 ILFEGRDAAGKGGAIKRMMEHLNPRGARVVALEKPSDTERGQW----------------- 184 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + + H+ G+I+L DR Sbjct: 185 ----YFQRYVQHLPT-------AGEIVLFDRSWY 207 >gi|110835427|ref|YP_694286.1| cell division protein FtsY [Alcanivorax borkumensis SK2] gi|110648538|emb|CAL18014.1| Cell division protein FtsY [Alcanivorax borkumensis SK2] Length = 397 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 18/153 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G GKTT I L + + V + G T A A + + ++ A+ Sbjct: 199 GVNGVGKTTTIGKLACRFKAEGKSVMLAA--GDTFRAAAVEQLQVWGERNDIPVVAQH-- 254 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI--SVQE 127 A V + ++ A G IL+ D R ++ +D L ++ +++ Sbjct: 255 TGADSASVVYDAVQAAQSRGADILIAD---------TAGRLHTRGNLMDELTKVTRVMKK 305 Query: 128 VMPDC--TIILDLPVDIGLKRVQNRYSLRESAC 158 ++PD ++L L G + R++A Sbjct: 306 LIPDAPHEVLLVLDAGTGQNAINQAEQFRDAAG 338 >gi|51892421|ref|YP_075112.1| iron-siderophore uptake ABC system ATP-binding component [Symbiobacterium thermophilum IAM 14863] gi|51856110|dbj|BAD40268.1| iron-siderophore uptake ABC system ATP-binding component [Symbiobacterium thermophilum IAM 14863] Length = 562 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 25/70 (35%), Gaps = 2/70 (2%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREP--GGTPAAEAARHVLLSCGVDEFGAEAEA 68 G G GK+T + L R L + P G+ + A R +LS G Sbjct: 319 GPNGCGKSTLLKALARLLPHAGGTALLDGRPITAGSQRSFARRLAVLSQGAAAPPEVTVE 378 Query: 69 IVFAAARLDH 78 + A R H Sbjct: 379 ELVAMGRFPH 388 >gi|15963925|ref|NP_384278.1| hypothetical protein SMc02847 [Sinorhizobium meliloti 1021] gi|15073100|emb|CAC41559.1| Hypothetical protein SMc02847 [Sinorhizobium meliloti 1021] Length = 122 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 16/31 (51%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 + I G+ G+GKTT L + L+ + V Sbjct: 1 MLIILGGLPGSGKTTIARALAKRLRAVHVRV 31 >gi|121612417|ref|YP_001000305.1| hypothetical protein CJJ81176_0632 [Campylobacter jejuni subsp. jejuni 81-176] gi|87250499|gb|EAQ73457.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] Length = 162 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 27/100 (27%), Gaps = 30/100 (30%) Query: 3 SGL--FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 GL I EG + AGK I L L + V +P + Sbjct: 52 KGLKVLILIEGRDAAGKGGAIKRLIEHLNPRGCRVVALEKPSDVEKTQW----------- 100 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLD 100 + + I G+I++ DR Sbjct: 101 -----------------YFQRYIAHLPSAGEIVIFDRSWY 123 >gi|332111192|gb|EGJ11224.1| L-serine ammonia-lyase [Rubrivivax benzoatilyticus JA2] Length = 464 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 7/76 (9%) Query: 98 FLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDCTIILD-LPVDIGLKRVQNRYSLRES 156 +L S G+ S L + + PD T+ +D +P + R R +L Sbjct: 49 WLYGSLGATGKGHGSDTAVL-----LGLAGHEPD-TVPIDEVPALLAAIRASARLALLGR 102 Query: 157 ACLDYFERKDVMIHEK 172 +D+ E +D+ H + Sbjct: 103 QAVDFIETRDLKFHRR 118 >gi|320546282|ref|ZP_08040602.1| deoxynucleoside kinase [Streptococcus equinus ATCC 9812] gi|320449059|gb|EFW89782.1| deoxynucleoside kinase [Streptococcus equinus ATCC 9812] Length = 212 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 29/163 (17%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I G+ G GKTT+ SLL + L EP +L ++ Sbjct: 2 IILAGMIGVGKTTYTSLLAKEL---GTTAFF--EPVDNNP-------ILDKYYEDPEKYG 49 Query: 67 EAI-VFAAARLDHVENVIRPALMEGKILLCDR--FLDSSYAY----QGERDSSQ----HL 115 A+ ++ + I+ A +L DR + D+ + Y QG + Sbjct: 50 FALQIYFLNKR---FKSIKEAYEADNNVL-DRSIYEDALFTYINTLQGSISDQEYNIYLE 105 Query: 116 FLDSLQEISVQEVM--PDCTIILDLPVDIGLKRVQNRYSLRES 156 LD++ E PD I L+ D + ++ R E Sbjct: 106 LLDNMMEEIDGLPKKAPDLLIYLEGSFDHIMNNIKKRGRDFEQ 148 >gi|317013767|gb|ADU81203.1| guanylate kinase [Helicobacter pylori Gambia94/24] Length = 206 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 9/103 (8%) Query: 1 MNS--GLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSC 57 MN+ L I G GAGK+T L+ + + ++ + TR+P + + +S Sbjct: 1 MNNDFNLLI-LSGPSGAGKSTLTKYLQEKIPKTHFSLSTTTRKPREGEV-DGLHYNFVSE 58 Query: 58 GVDEFGAEAEAIVFAAARLDHVENV----IRPALMEGKILLCD 96 + G E + A +H + AL EGKI++ D Sbjct: 59 EEFKQGIEKGQFLEWAIVHNHYYGTSKIPVEKALKEGKIVIFD 101 >gi|297516357|ref|ZP_06934743.1| D-gluconate kinase [Escherichia coli OP50] Length = 186 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 25/85 (29%), Gaps = 15/85 (17%) Query: 134 IILDLPVDIGLKRVQNRYSLRESACLDY--FERKDVMIHEKRRQIFLDIARNQPDRCHIV 191 + LD + L R+Q R L FE L+ + + Sbjct: 102 LWLDGDYETILARMQRRAGHFMPVALLKSQFEA-------------LERPQADEQDIVRI 148 Query: 192 DSAHSFQSVATNILNIVWELVQKRV 216 D H +V V + Q R+ Sbjct: 149 DINHDIANVTEQCRQAVLAIRQNRI 173 >gi|228922362|ref|ZP_04085669.1| hypothetical protein bthur0011_33520 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837417|gb|EEM82751.1| hypothetical protein bthur0011_33520 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 195 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 25/164 (15%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 IS +G +GKTT + L+++ + V P P E + + L Sbjct: 8 ISLQGPMASGKTTL----AKRLEKRGFRVIY-ENP--YPIVEKRKKLNLDMNSKVG---- 56 Query: 67 EAIVFAAARLDHVENVIRPALM-EGKILLCDR-------FLDSSYAYQGERDSSQHLFLD 118 F + +E I+ + +++ DR F GE + D Sbjct: 57 ----FIMNQKMFMEAKIKEFQNVKNSVVIFDRGPEDIEFFTLFYPTIIGEEWDIETELKD 112 Query: 119 SLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYF 162 L ++ +E D LD+ R N + S + F Sbjct: 113 ELYKL--RECRSDAIFYLDVTKKNVYARKNNDRTRNRSTFEEQF 154 >gi|207721699|ref|YP_002252138.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia solanacearum MolK2] gi|206586861|emb|CAQ17446.1| deoxyguanosine kinase (dguo kinase) (dgk) protein [Ralstonia solanacearum MolK2] Length = 214 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 26/179 (14%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I EG G GKT L L+ + P P + Sbjct: 9 IVVEGPIGVGKTALAQRLADHLRA----ATLFETPEDNPFLARFYE---EPARYALPVQL 61 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQ 126 ++ R + A + G+ ++ D FL + + L L + + Sbjct: 62 RFLL---QRTQRLA-AWHKATLAGERIVADSFLPRDRLFAQLTLPADELV---LYDAMAR 114 Query: 127 EVMP-----DCTIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDI 180 + P D + L + L R+ R E+ DV E+ + ++ Sbjct: 115 ALAPPPQRIDLVVCLQARAEDLLPRIARRAVPFEAGI-------DVEYLERICAAYGEL 166 >gi|187251716|ref|YP_001876198.1| putative ipoprotein releasing system [Elusimicrobium minutum Pei191] gi|186971876|gb|ACC98861.1| Putative lipoprotein-releasing system [Elusimicrobium minutum Pei191] Length = 221 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 15/24 (62%) Query: 2 NSGLFISFEGIEGAGKTTHISLLK 25 N G FI G G+GK+T ++++ Sbjct: 31 NKGDFIVLLGPSGSGKSTLLNMIA 54 >gi|197124638|ref|YP_002136589.1| hypothetical protein AnaeK_4257 [Anaeromyxobacter sp. K] gi|196174487|gb|ACG75460.1| conserved hypothetical protein [Anaeromyxobacter sp. K] Length = 213 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 32/89 (35%), Gaps = 13/89 (14%) Query: 94 LCDRFLDSSYAY--QGERDSSQHLFLD-SLQ----EISVQEVMPDCTIILDLPVDIGLKR 146 + DRF S+ AY Q R +LD L+ + PD T +R Sbjct: 92 IVDRFHVSTRAYQLQAGRRDPDFSWLDPRLRVLGFRHVLCVRRPD-TF-----AAARAER 145 Query: 147 VQNRYSLRESACLDYFERKDVMIHEKRRQ 175 ++ + LD F R+ + R+ Sbjct: 146 LKISGKPSQYDDLDAFVREQDLFRRLVRE 174 >gi|157145938|ref|YP_001453257.1| hypothetical protein CKO_01691 [Citrobacter koseri ATCC BAA-895] gi|157083143|gb|ABV12821.1| hypothetical protein CKO_01691 [Citrobacter koseri ATCC BAA-895] Length = 272 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHV 53 ++ G G+GK+T I L+ + D+ + +P G A R + Sbjct: 52 VTILGPSGSGKSTLIRLINQLESLSGGDIFIDDKPIGQLKGAALRQL 98 >gi|149194352|ref|ZP_01871449.1| molybdenum transport atp-binding protein [Caminibacter mediatlanticus TB-2] gi|149135527|gb|EDM24006.1| molybdenum transport atp-binding protein [Caminibacter mediatlanticus TB-2] Length = 285 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTR 39 + G FI+ +G G+GKTT + ++ + K + + Sbjct: 25 IKKGEFIAIKGSSGSGKTTLLRIIAGLEKSKGEIIVFDK 63 >gi|308800596|ref|XP_003075079.1| putative deoxyribonucleoside kinase (ISS) [Ostreococcus tauri] gi|116061633|emb|CAL52351.1| putative deoxyribonucleoside kinase (ISS) [Ostreococcus tauri] Length = 201 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 67/187 (35%), Gaps = 34/187 (18%) Query: 8 SFEGIEGAGKTTHISLLKR---FLQRKNYDVHVTREPGGTP------AAEAARHVLLSCG 58 S EG G+GK+T + + L+ V EP + +E A H LL Sbjct: 6 SLEGNIGSGKSTFLKEVVTGGMHLKGLAKAVP---EPVHSWQRIPCGRSEQASHNLLKEF 62 Query: 59 VDEFGAEAEAI---VFAAARLDHVENVIRPALMEGKI----LLCDRFLD-SSYAYQGERD 110 A VF L E+ + KI + DR + SS QG Sbjct: 63 YANPEKYAYVFQNYVFMTRFLQERESESSESTNLLKIMERSVFSDRNVFVSSVQEQGWFS 122 Query: 111 SSQHLF------------LDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESA- 157 + ++++ + ++ ++PD I L + + +KR++ R E Sbjct: 123 ELELDLYHAWSCPMIRVRVENILQ-ALPCLVPDGFIYLQVAPSVCMKRLRQRARGEEIDV 181 Query: 158 CLDYFER 164 L+Y E Sbjct: 182 TLEYLES 188 >gi|126723788|ref|NP_001075641.1| PAPS synthase 1 [Oryctolagus cuniculus] gi|47834978|gb|AAT39124.1| PAPS synthase 1 [Oryctolagus cuniculus] Length = 624 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 26/136 (19%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ GAGKTT L+ +L P + R L F E Sbjct: 59 GLSGAGKTTVSMALEEYLVCHGI-------PCYALDGDNIRQGL--NKNLGFSPE----- 104 Query: 71 FAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMP 130 R ++V + A + F D+ S ++ ++I +P Sbjct: 105 ---DREENVRRIAEVAKL---------FADAGLVCITSFISPYTQDRNNARQIHEGASLP 152 Query: 131 DCTIILDLPVDIGLKR 146 + +D P+ + +R Sbjct: 153 FFEVFVDAPLHVCEQR 168 >gi|14521315|ref|NP_126790.1| ATPase [Pyrococcus abyssi GE5] gi|5458533|emb|CAB50021.1| Hypothetical protein, containing KH nucleic acid binding domain [Pyrococcus abyssi GE5] Length = 608 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 2/47 (4%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAA 50 G+ ++ G GAGKTT + L + V +P +E Sbjct: 267 GILVA--GPPGAGKTTFVQALAEWYASMGKIVKTMEKPRDLQVSEEI 311 >gi|150392222|ref|YP_001322271.1| LAO/AO transport system ATPase [Alkaliphilus metalliredigens QYMF] gi|149952084|gb|ABR50612.1| LAO/AO transport system ATPase [Alkaliphilus metalliredigens QYMF] Length = 313 Score = 37.7 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 8/100 (8%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREP-----GGTPAAEAAR--HVL 54 I G GAGK+T L + L++KN V + +P GG + R + Sbjct: 42 KARIIGITGPPGAGKSTLTDKLVKILRKKNKTVGIIAVDPTSPFTGGAILGDRIRMSDLY 101 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILL 94 GV + +R I A I++ Sbjct: 102 TDPGVFIRSMGTRGHLGGISRATQSAIKILDAYGVDFIII 141 >gi|328951338|ref|YP_004368673.1| Adenylyl-sulfate kinase [Marinithermus hydrothermalis DSM 14884] gi|328451662|gb|AEB12563.1| Adenylyl-sulfate kinase [Marinithermus hydrothermalis DSM 14884] Length = 185 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDV 35 F G+ GAGKTT + L+R+ + V Sbjct: 12 FTGLSGAGKTTLARAIYDELKRRGHRV 38 >gi|302525069|ref|ZP_07277411.1| phosphonate ABC transporter, ATP-binding protein [Streptomyces sp. AA4] gi|302433964|gb|EFL05780.1| phosphonate ABC transporter, ATP-binding protein [Streptomyces sp. AA4] Length = 269 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 3/93 (3%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHV-LLSCGVDEFG 63 F G GKTT + L R L+ + V++ E + A E AR + LL Sbjct: 37 FTVIVGPNACGKTTLLRALARMLKPRAGSVYLDGEVISSYGAKEVARRLGLLPQSSIAPD 96 Query: 64 AEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + + A R H + ++R E ++ D Sbjct: 97 GITVSDLVARGRYPH-QKLLRQWSREDATVVAD 128 >gi|254293915|ref|YP_003059938.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Hirschia baltica ATCC 49814] gi|254042446|gb|ACT59241.1| sulfate adenylyltransferase, large subunit [Hirschia baltica ATCC 49814] Length = 642 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T +L+++ L LL G + Sbjct: 478 FTGLSGSGKSTIANLVEKKLFAAGKHTF-----------------LLDGDNVRHGLNRDL 520 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A R++++ V + G I++ S ++++ Sbjct: 521 GFTDADRVENIRRVGEVAKLMTDAGLIVMT------------AFISPFQAERQMVRDLFT 568 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 + + +D P+++ +R Sbjct: 569 EGEF--IEVFVDTPLEVAEQR 587 >gi|253574183|ref|ZP_04851525.1| ABC transporter transmembrane region [Paenibacillus sp. oral taxon 786 str. D14] gi|251846660|gb|EES74666.1| ABC transporter transmembrane region [Paenibacillus sp. oral taxon 786 str. D14] Length = 631 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLS 56 G I+ G GAGKTT I+LL RF + + V G AE R L S Sbjct: 409 KQGQMIAIVGPTGAGKTTLINLLMRFYEVNGGSITV----DGVNIAEMRRGDLRS 459 >gi|242067423|ref|XP_002448988.1| hypothetical protein SORBIDRAFT_05g002950 [Sorghum bicolor] gi|241934831|gb|EES07976.1| hypothetical protein SORBIDRAFT_05g002950 [Sorghum bicolor] Length = 926 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 44/101 (43%), Gaps = 12/101 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDV--HVTREPGGTPAAEAARHVLLSCGVDEF 62 IS G G GK+T + + L+ KN+ V + P + A++ + +L ++ Sbjct: 190 KVISVIGPSGVGKSTLVRDVYETLEIKNHFVEQALATFPPYSSASDILKLILRDLKEED- 248 Query: 63 GAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSS 102 F ++++ + ++ L + +++ D + S+ Sbjct: 249 --------FTLSKMEVTKELLDKKLKGKQYLVVIDGEVSST 281 >gi|213022060|ref|ZP_03336507.1| ABC transporter ATP-binding protein [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 205 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 11 GIEGAGKTTHISLLKRFLQRKN 32 G +GAGKTT + +L L+ Sbjct: 40 GPDGAGKTTLMRMLAGQLKADG 61 >gi|220925702|ref|YP_002501004.1| plasmid partitioning protein RepA [Methylobacterium nodulans ORS 2060] gi|219950309|gb|ACL60701.1| plasmid partitioning protein RepA [Methylobacterium nodulans ORS 2060] Length = 405 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 6/64 (9%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIVFAA 73 G+GKTT + L ++L K Y V L EF +A ++AA Sbjct: 133 GSGKTTTAAHLAQYLALKGYRVLAVDLDPQASLTA------LHGYQPEFDVDANQTLYAA 186 Query: 74 ARLD 77 R D Sbjct: 187 IRYD 190 >gi|158312845|ref|YP_001505353.1| superfamily I DNA/RNA helicase [Frankia sp. EAN1pec] gi|158108250|gb|ABW10447.1| Superfamily I DNA and RNA helicase and helicase subunits-like protein [Frankia sp. EAN1pec] Length = 2622 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG 42 M++G + EG G GKT I+ L L + V VT + G Sbjct: 776 MDNG--VVVEGPPGTGKTHTIANLISALLAEGRRVLVTSQKG 815 >gi|116513482|ref|YP_812388.1| ABC-type Mn/Zn transport system, ATPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116092797|gb|ABJ57950.1| ABC-type Mn/Zn transport system, ATPase component [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 236 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 17/24 (70%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL 24 ++ G+FI+ G GAGK+T I+ L Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47 >gi|28210472|ref|NP_781416.1| cobalt transport ATP-binding protein cbiO [Clostridium tetani E88] gi|28202909|gb|AAO35353.1| cobalt transport ATP-binding protein cbiO [Clostridium tetani E88] Length = 110 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 34/90 (37%), Gaps = 13/90 (14%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDE 61 N G FI G G GK+T I LL R V GGT E V ++ E Sbjct: 34 NEGEFILIVGPSGCGKSTLIRLLNR---------VVPDYYGGTIEGE----VSINGRNIE 80 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGK 91 F + + I H E + + +GK Sbjct: 81 FLDKKQVIENVGMVYQHPEKQLYFKMWKGK 110 >gi|53714482|ref|YP_100474.1| uridine kinase [Bacteroides fragilis YCH46] gi|60682505|ref|YP_212649.1| uridine kinase [Bacteroides fragilis NCTC 9343] gi|253564983|ref|ZP_04842439.1| uridine kinase [Bacteroides sp. 3_2_5] gi|52217347|dbj|BAD49940.1| uridine kinase [Bacteroides fragilis YCH46] gi|60493939|emb|CAH08730.1| putative uridine kinase [Bacteroides fragilis NCTC 9343] gi|251946448|gb|EES86825.1| uridine kinase [Bacteroides sp. 3_2_5] gi|301163964|emb|CBW23519.1| putative uridine kinase [Bacteroides fragilis 638R] Length = 204 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 18/162 (11%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA 64 L I G G+GKTT + + L V + ++ ++ + D A Sbjct: 2 LIIGIAGGTGSGKTTVVRKIIESLPA-GEVVLLPQDSYYKDSSHVPVEERQNINFDHPDA 60 Query: 65 EAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEI- 123 +++ HV L EGK + + + Q E + + ++ I Sbjct: 61 FEWSLL-----SKHVA-----LLKEGKCIEQPTYSYLTCTRQPETIHIEPREVVIIEGIL 110 Query: 124 -----SVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLD 160 ++ +M D I +D D L RV R + + Sbjct: 111 ALCDKKLRNMM-DLKIFVDADPDERLIRVIQRDVVERGRTAE 151 >gi|326384259|ref|ZP_08205941.1| putative ABC transporter ATP-binding protein [Gordonia neofelifaecis NRRL B-59395] gi|326197124|gb|EGD54316.1| putative ABC transporter ATP-binding protein [Gordonia neofelifaecis NRRL B-59395] Length = 238 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV--TREPGGTPAAEAARHVLLSCGVD 60 G I+ G GAGKTT + L L R+ V V P G P + ++L Sbjct: 29 KGEVIALLGPNGAGKTTMLETLAGLLPREAGKVVVGGVELPSGNPRSAVRNGLVLVPDDR 88 Query: 61 EF 62 Sbjct: 89 AL 90 >gi|310642744|ref|YP_003947502.1| guanylate kinase, putative [Paenibacillus polymyxa SC2] gi|309247694|gb|ADO57261.1| Guanylate kinase, putative [Paenibacillus polymyxa SC2] Length = 190 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 15/38 (39%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 M GL G G GK T + L+ L Y V T Sbjct: 1 MAKGLLFVISGPSGVGKGTVGNALREKLPEITYSVSAT 38 >gi|260460590|ref|ZP_05808841.1| ABC transporter related protein [Mesorhizobium opportunistum WSM2075] gi|259033695|gb|EEW34955.1| ABC transporter related protein [Mesorhizobium opportunistum WSM2075] Length = 354 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 58/167 (34%), Gaps = 34/167 (20%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQ-RKNYDVH----VTR-EPGGTPAAEAARHVLLSC 57 G F+SF G G GKTT + ++ F + V +TR +P + L Sbjct: 31 GEFVSFLGPSGCGKTTVLRMVAGFEEPSAGKIVVAGKDITRLKPNQRNVGMVFQAYALFP 90 Query: 58 GVDEFGAEAEAIVFA------AAR--LDHVENVIRPALMEGKILLCDRFLDSSYAYQGER 109 + A + A A R + ++ + P + DR+ YQ Sbjct: 91 NLTVAQNIAFGLKVAGMSKADADRRVAEMLDMIKLPQMA-------DRYP-----YQLSG 138 Query: 110 DSSQHLFLDSLQEISVQEVMPDCTIILD--LPVDIGLKRVQNRYSLR 154 Q + L + I+ P ++LD L RV R +R Sbjct: 139 GQQQRIALA--RAIA---PKPKL-LLLDEPLSALDAKVRVSLREEIR 179 >gi|258611570|ref|ZP_05233577.2| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL N3-165] gi|284801137|ref|YP_003413002.1| hypothetical protein LM5578_0886 [Listeria monocytogenes 08-5578] gi|284994279|ref|YP_003416047.1| hypothetical protein LM5923_0841 [Listeria monocytogenes 08-5923] gi|258601303|gb|EEW14628.1| spermidine/putrescine ABC transporter [Listeria monocytogenes FSL N3-165] gi|284056699|gb|ADB67640.1| hypothetical protein LM5578_0886 [Listeria monocytogenes 08-5578] gi|284059746|gb|ADB70685.1| hypothetical protein LM5923_0841 [Listeria monocytogenes 08-5923] Length = 366 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60 >gi|239945677|ref|ZP_04697614.1| putative ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL 15998] gi|239992146|ref|ZP_04712810.1| putative ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL 11379] Length = 276 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--------------- 48 G F++ G G GK+T + L+ L + DV + E P + Sbjct: 53 GEFVAIVGPSGCGKSTLLKLVAGLLTASSGDVLLGGERVSGPRHDIGYVFQRAALLEWRS 112 Query: 49 AARHVLLSCGVDEFGA 64 A R++LL + Sbjct: 113 ALRNILLQAEIRRMEP 128 >gi|238062047|ref|ZP_04606756.1| serine/threonine protein phosphatase [Micromonospora sp. ATCC 39149] gi|237883858|gb|EEP72686.1| serine/threonine protein phosphatase [Micromonospora sp. ATCC 39149] Length = 840 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 48/212 (22%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ G+ G+GK+T H P +++A R ++ D+ A Sbjct: 9 LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDAFRGMVADDENDQ-SAS 53 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A+A L HV + L G + + D +A G ++ Sbjct: 54 ADAF----DALHHVAGI---RLRRGLLTVVDATNLQPHARAGLVRVARE----------- 95 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIARNQ 184 +V+P I+LD+P + +R Q R L +R RQ + +AR Sbjct: 96 HDVLP-VAIVLDVPEAVAWERTQGRADRTHGRQVLARMQRD-------LRQSYGRLAREG 147 Query: 185 PDRCHIVDSAHSFQSV-ATNILNIVWELVQKR 215 + H++ + A I +L+ R Sbjct: 148 FRKVHVL---RGVDEIDAAEIR--YEKLLNDR 174 >gi|212224855|ref|YP_002308091.1| cysC adenylylsulfate kinase [Thermococcus onnurineus NA1] gi|212009812|gb|ACJ17194.1| cysC adenylylsulfate kinase [Thermococcus onnurineus NA1] Length = 181 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 15/33 (45%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV 35 G I G GAGKTT L + L+ Y V Sbjct: 9 KGFTIWLTGPSGAGKTTLAVKLAKKLREMGYRV 41 >gi|172040476|ref|YP_001800190.1| signal recognition particle protein [Corynebacterium urealyticum DSM 7109] gi|171851780|emb|CAQ04756.1| signal recognition particle protein [Corynebacterium urealyticum DSM 7109] Length = 531 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 22/139 (15%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLL----------SCGVD 60 G++GAGKTT L R+L ++ + + P A ++ G Sbjct: 107 GLQGAGKTTLAGKLARYLSKQGHTPMLVACDLQRPGAVQQLQIVGERAGVTTFAPDPGTS 166 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALM-EGKILLCDRFLDSSYAYQGERDSSQHLFLDS 119 + E ++ E I A + I++ D R + Sbjct: 167 LESHDHEMGTSTGDPVEVAEKGIEEAYRTQHDIVIID---------TAGRLGIDETLMTQ 217 Query: 120 LQEISVQEVMPD-CTIILD 137 + I V PD ++D Sbjct: 218 ARNI-RDAVEPDEVLFVID 235 >gi|254369795|ref|ZP_04985805.1| signal recognition particle receptor FtsY [Francisella tularensis subsp. holarctica FSC022] gi|157122754|gb|EDO66883.1| signal recognition particle receptor FtsY [Francisella tularensis subsp. holarctica FSC022] Length = 343 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 7/88 (7%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAA-EAARHVLLSCGVDEFGAEAEAI 69 G+ G GKTT I L + LQ + V + AA E R + E Sbjct: 146 GVNGVGKTTTIGKLTKKLQSQGKSVILAAGDTFRAAAVEQLREW-GDRNNTHVVYQHE-- 202 Query: 70 VFAAARLDHVENVIRPALMEG-KILLCD 96 A + N I A +G +++ D Sbjct: 203 --GADSASVIYNAIGSAKSKGIDVVIAD 228 >gi|88602884|ref|YP_503062.1| hypothetical protein Mhun_1612 [Methanospirillum hungatei JF-1] gi|88188346|gb|ABD41343.1| Polyphosphate:AMP phosphotransferase [Methanospirillum hungatei JF-1] Length = 498 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 42/226 (18%), Positives = 71/226 (31%), Gaps = 44/226 (19%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEA 66 I FEG + AGK I L + Y V EP G P ++ Sbjct: 303 IVFEGWDAAGKGGCIIRLAESFNPRGYIV----EPIGPP-----------NDWEKMHHYL 347 Query: 67 EAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSS-YAYQGERDSSQHLFLDSLQEISV 125 R +G I + DR + E S+ + + EI+V Sbjct: 348 WRFYTRFPR-------------KGHITIFDRSWYGRVLVERVEGFCSESEWQRAYHEINV 394 Query: 126 QEVMPDCT--------IILDLPVDIGLKRVQNRYSLRESA----CLDYFERKDVMIHEKR 173 E T L + D L+R + R + E D+ R+ +E+ Sbjct: 395 MEDE--LTREGTILIKFWLHIDKDEQLRRFEERQNTPEKNWKITEEDWRNREKWDQYERA 452 Query: 174 RQIFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQKRVSPL 219 + I+ + + + + +L V +QKR+ + Sbjct: 453 VNAMIRRTTTIQAPWTIIPANNKYYA-RIAVLETVRSAMQKRLKEM 497 >gi|114321492|ref|YP_743175.1| sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase [Alkalilimnicola ehrlichii MLHE-1] gi|114227886|gb|ABI57685.1| adenylylsulfate kinase [Alkalilimnicola ehrlichii MLHE-1] Length = 638 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 34/141 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + L++ L + Y LL G + Sbjct: 470 FTGLSGSGKSTLSNALEQRLYQLGYH-----------------SYLLDGDNIRHGLNGDL 512 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 R++++ V R + G +++ A+ + + + + +++ Sbjct: 513 GFSREDRVENIRRIGEVARLFVDAGLLVVT--------AFISPFRADRAMVRELVED--- 561 Query: 126 QEVMPDCTIILDLPVDIGLKR 146 E + I +D P+++ +R Sbjct: 562 GEFVE---IFVDTPLEVCEQR 579 >gi|125776096|ref|XP_001359167.1| GA19345 [Drosophila pseudoobscura pseudoobscura] gi|54638909|gb|EAL28311.1| GA19345 [Drosophila pseudoobscura pseudoobscura] Length = 249 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 58/216 (26%), Gaps = 57/216 (26%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G GAGK T S + T A + R G + Sbjct: 66 GGPGAGKGTQCSKIVNRF-------LFT----HLSAGDLLREERTREGSE---------- 104 Query: 71 FAAARLDHVENVIRPALMEGKIL---LCDRFLDSSYAYQGERDSSQHLFLDSL--QEISV 125 ++I + GKI+ + S + +D + ++ Sbjct: 105 --------FGSLIEDYIRNGKIVPVEI----TCSLLENAMKNSGKSLFLIDGFPRNQDNL 152 Query: 126 QEV---MPDCT-----IILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIF 177 M D + D ++ +KR R D E +KR Q + Sbjct: 153 DGWNRQMSDKVDVQFVLFFDCDEEVCVKRCLIRGQGGSGRSDDNLES-----LKKRIQTY 207 Query: 178 LD----IAR--NQPDRCHIVDSAHSFQSVATNILNI 207 + I + + + +D++ V + Sbjct: 208 NNDSMPIIKYFDDAGQVKRIDASPDADQVFREVERT 243 >gi|326921364|ref|XP_003206930.1| PREDICTED: guanylate kinase-like [Meleagris gallopavo] Length = 198 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 75/222 (33%), Gaps = 39/222 (17%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL-KRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCG 58 M + G GAGK+T I L K + + V H TR+P H + Sbjct: 1 MQGPRPVVLSGPSGAGKSTLIKKLFKDYENIFGFSVSHTTRQPRPGEVNGKDYHFV---T 57 Query: 59 VDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLD 118 +E E +A I A G + + S A Q + +Q LD Sbjct: 58 REEMKKEIDA-----------GEFIEHAEFSGNM-----YGTSKRAVQAVQAKNQICILD 101 Query: 119 SLQEISVQEVMPDCT-IILDLPV---DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 + D I + + D+ KR+++R + E + V Sbjct: 102 IDIQGVKNIKKTDLNPIYISVQPPSIDVLEKRLRDRQTETEESLQKRLTAARVD------ 155 Query: 175 QIFLDIARNQPDRC--HIVDSAHSFQSVATNILNIVWELVQK 214 L++++ +P I++ + + + + + +QK Sbjct: 156 ---LELSK-EPGLFDLVIIN--DDLEKAYSELKEQLLKEIQK 191 >gi|325661118|ref|ZP_08149745.1| hypothetical protein HMPREF0490_00478 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472625|gb|EGC75836.1| hypothetical protein HMPREF0490_00478 [Lachnospiraceae bacterium 4_1_37FAA] Length = 255 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 16/28 (57%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQ 29 G FI+ G G GK+T +SL+ LQ Sbjct: 32 KKGEFIAIVGPSGCGKSTLLSLIAGLLQ 59 >gi|323466254|gb|ADX69941.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10] Length = 168 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 42/150 (28%), Gaps = 32/150 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 I G G+GKTT + + L R + P T E + Sbjct: 2 KPKLIIIRGNSGSGKTTLAKEIHQRLPRNTLLI-----PQDTVRREMLN--VKDGENTLA 54 Query: 63 GAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE 122 E ++ H I ++ K Y +Q LF D + Sbjct: 55 LPLLENLLEYGYT--HCSYTILEGILNAKW------------YSELFRKAQQLFGDQIYA 100 Query: 123 ISVQEVMPDCTIILDLPVDIGLKRVQNRYS 152 D+P + ++R + R+ Sbjct: 101 Y-----------YFDIPFEETMRRHKERHE 119 >gi|310722454|ref|YP_003969278.1| DNA helicase [Aeromonas phage phiAS4] gi|306021297|gb|ADM79832.1| DNA helicase [Aeromonas phage phiAS4] Length = 438 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 21/54 (38%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 M + I+ G G+GKTT L L + V P E ++H L Sbjct: 22 MRTKRHITIRGPAGSGKTTMTRFLLERLFQTGQQGIVLTAPTHQAKKELSKHAL 75 >gi|302864688|ref|YP_003833325.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Micromonospora aurantiaca ATCC 27029] gi|302567547|gb|ADL43749.1| Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) [Micromonospora aurantiaca ATCC 27029] Length = 838 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 48/196 (24%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 ++ G+ G+GK+T H P +++ R ++ D+ A Sbjct: 11 LVALVGVSGSGKSTFARR------------HFA--PSQVLSSDTFRGLVADDENDQ-SAS 55 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A+A L HV + L G + + D +A G ++ Sbjct: 56 ADAF----DALHHVAAI---RLRRGLLTVVDATNLQPHARAGLIRVARE----------- 97 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESAC-LDYFERKDVMIHEKRRQIFLDIARNQ 184 +V+P I+LD+P + +R + R L+ R+D+ RQ + +AR Sbjct: 98 HDVLP-VAIVLDVPEAVAWERTEARADRTHGRQVLNRM-RRDL------RQSYGRLAREG 149 Query: 185 PDRCHI------VDSA 194 + H+ +D+A Sbjct: 150 FRKVHVLRGVDEIDAA 165 >gi|225864914|ref|YP_002750292.1| hypothetical protein BCA_3021 [Bacillus cereus 03BB102] gi|225790829|gb|ACO31046.1| hypothetical protein BCA_3021 [Bacillus cereus 03BB102] Length = 282 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 MN+ I EG+ G GK+T L+ L + +V + E Sbjct: 1 MNT-KLIIVEGLPGFGKSTTAQLINDILSQNKIEVELFLE 39 >gi|167750833|ref|ZP_02422960.1| hypothetical protein EUBSIR_01816 [Eubacterium siraeum DSM 15702] gi|167656268|gb|EDS00398.1| hypothetical protein EUBSIR_01816 [Eubacterium siraeum DSM 15702] gi|291530590|emb|CBK96175.1| guanylate kinase [Eubacterium siraeum 70/3] Length = 209 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 66/214 (30%), Gaps = 39/214 (18%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 MN GL I G GK T + L + V TR + H + Sbjct: 9 MNKGLPIVISAPSGCGKDTILEQLYKKNSNLTQSVSATTRAMREGEIDGVSYHFTTTDAF 68 Query: 60 DEFGAEAEAI---VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLF 116 ++ A E + + + + L +G+ ++ L Sbjct: 69 EKMIANGEVLEYTQYCGNYYGTPKKAVTDMLEQGRDVI--------------------LK 108 Query: 117 LDSLQEISVQEVMPDCTIILDLPV--DIGLKRVQNRYSLRESACLDYFERKDVMIHEKRR 174 ++ ++++++ P+C +I LP +R++ R + E + Sbjct: 109 IEVEGAMNIKKIFPECVLIFILPPSMSELERRLRKRGTETEETIAARIAQARNE------ 162 Query: 175 QIFLDIARNQPDRCHIVDS--AHSFQSVATNILN 206 L A +V+ + V T IL Sbjct: 163 ---LQFADKFD--YLVVNGELEKAVDDVNTVILA 191 >gi|159030194|emb|CAO91086.1| aroK [Microcystis aeruginosa PCC 7806] Length = 190 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 42/202 (20%) Query: 14 GAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGA-EAEAIVFA 72 G+GK+T LL R LQ + +D + E A + R + G F E + + Sbjct: 22 GSGKSTLGELLSRRLQYRFFDTDILIE---RVAGKKIREIFADEGEATFRELETQVLAEL 78 Query: 73 AARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVMPDC 132 ++ K ++ ++ +M Sbjct: 79 SSLT--------------KTVI------------ATGGGMVLKPINW--SYLRHGLM--- 107 Query: 133 TIILDLPVDIGLKRVQNRYSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRCHIVD 192 I LD+P+++ +KR++ S D + ++++ ++ + R + D Sbjct: 108 -IWLDVPLEVLVKRLKQDTSRPLLESTDLESKLELLLEQR-----RGLYAEADLRIFVSD 161 Query: 193 SAHSFQSVATNILNIVWELVQK 214 + + IL + +++ Sbjct: 162 -LDTPADIVEKILTAIPTVIKD 182 >gi|116872183|ref|YP_848964.1| spermidine/putrescine ABC transporter ATP- binding protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466107|sp|A0AGP9|POTA_LISW6 RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|116741061|emb|CAK20181.1| spermidine/putrescine ABC transporter ATP-binding protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 366 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 15/28 (53%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQR 30 G F + G G GKTT + L+ FL+ Sbjct: 33 KGKFYTLLGPSGCGKTTILRLIAGFLEA 60 >gi|41408582|ref|NP_961418.1| bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396940|gb|AAS04801.1| CysN [Mycobacterium avium subsp. paratuberculosis K-10] Length = 616 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 20/95 (21%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEF 62 G + F G+ G+GK++ L+++ L K + +L Sbjct: 444 RGKTVWFTGLSGSGKSSVAMLVEQKLLEKGAQAY-----------------VLDGDNLRH 486 Query: 63 GAEAEAIVFAAARLDHVENVIRPA--LME-GKILL 94 G A+ A R +++ + A L + G ++L Sbjct: 487 GLNADLGFSMADRAENLRRLAHVAALLADCGNVVL 521 >gi|110634009|ref|YP_674217.1| adenylate kinase [Mesorhizobium sp. BNC1] gi|123057917|sp|Q11HS3|KAD_MESSB RecName: Full=Adenylate kinase; Short=AK; AltName: Full=ATP-AMP transphosphorylase gi|110284993|gb|ABG63052.1| Adenylate kinase [Chelativorans sp. BNC1] Length = 194 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 27/208 (12%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAAR-HVLLSCGVDEFGAEAEAI 69 G GAGK T +L L H+ + G A + + E + Sbjct: 7 GPPGAGKGTQAQILVEKL-------HIPQLSTGDMLRAAVKAETEIGKKAKAVMDAGELV 59 Query: 70 VFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 A E + +P G + D + R +Q ++++ + + + Sbjct: 60 SDAIVNAIVAERIDQPDCANGF--ILDGY---------PRTLAQADAVEAM--LGERGLK 106 Query: 130 PDCTIILDLPVDIGLKRVQNR-YSLRESACLDYFERKDVMIHEKRRQIFLDIARNQPDRC 188 D I L + + R+ R + + + + E+ R+ + A Sbjct: 107 LDAVIELVVDDKALVGRIMKRAEDAQAAGQPVRRDDNPEVFEERLREYYKKTAPLVGYYY 166 Query: 189 HI-----VDSAHSFQSVATNILNIVWEL 211 VD S V I I+ + Sbjct: 167 AKGLLKGVDGMASIDEVTRQIEGILAKA 194 >gi|325684784|gb|EGD26937.1| ABC superfamily ATP binding cassette transporter, ABC protein [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 236 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/24 (45%), Positives = 17/24 (70%) Query: 1 MNSGLFISFEGIEGAGKTTHISLL 24 ++ G+FI+ G GAGK+T I+ L Sbjct: 24 LDKGMFIALIGANGAGKSTLINSL 47 >gi|315642493|ref|ZP_07897011.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus italicus DSM 15952] gi|315482266|gb|EFU72826.1| ABC superfamily ATP binding cassette transporter, ABC protein [Enterococcus italicus DSM 15952] Length = 184 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFL 28 N G I F G G+GK+T + L+ L Sbjct: 53 NKGEVIVFSGPSGSGKSTLLKLIGTLL 79 >gi|300871840|ref|YP_003786713.1| hypothetical protein BP951000_2239 [Brachyspira pilosicoli 95/1000] gi|300689541|gb|ADK32212.1| hypothetical protein BP951000_2239 [Brachyspira pilosicoli 95/1000] Length = 49 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 3/32 (9%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYDVHVT 38 IS +G GAGK+T L+ + L Y T Sbjct: 10 ISLDGPSGAGKSTVAKLVAKKL---GYKYLDT 38 >gi|294341799|emb|CAZ90228.1| putative ABC-type transport system, ATPase component [Thiomonas sp. 3As] Length = 282 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 4/57 (7%) Query: 3 SGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHV----TREPGGTPAAEAARHVLL 55 G +S G G GK+T I+++ L ++ RE + R LL Sbjct: 59 RGKIVSIFGPNGCGKSTLINMIAGLLPVDGGEILFDGKSLRETVIGYVFQNYREALL 115 >gi|194099661|ref|YP_002002796.1| putative signal recognition particle protein [Neisseria gonorrhoeae NCCP11945] gi|240015638|ref|ZP_04722178.1| putative signal recognition particle protein [Neisseria gonorrhoeae FA6140] gi|240114036|ref|ZP_04728526.1| putative signal recognition particle protein [Neisseria gonorrhoeae MS11] gi|268600099|ref|ZP_06134266.1| signal recognition particle protein [Neisseria gonorrhoeae MS11] gi|193934951|gb|ACF30775.1| putative signal recognition particle protein [Neisseria gonorrhoeae NCCP11945] gi|268584230|gb|EEZ48906.1| signal recognition particle protein [Neisseria gonorrhoeae MS11] gi|317165145|gb|ADV08686.1| putative signal recognition particle protein [Neisseria gonorrhoeae TCDC-NG08107] Length = 417 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 224 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 279 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 280 -TGDSAAVCFDAVQAAKARGIDIVLAD 305 >gi|193806345|sp|P12115|KAD1_CYPCA RecName: Full=Adenylate kinase isoenzyme 1; Short=AK 1; AltName: Full=ATP-AMP transphosphorylase 1; AltName: Full=Myokinase Length = 194 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 63/213 (29%), Gaps = 38/213 (17%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 F+ G G+GK T + + + R + S + Sbjct: 12 FVV--GGPGSGKGTQCEKIVEK-----------YGYTHLSSGDLLRAEVASGSERGKQLQ 58 Query: 66 AEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISV 125 A LD V ++I+ A++ + +L Y + +E Sbjct: 59 AIMQKGELVPLDTVLDMIKDAMIAKADV-SKGYLIDGY----------PREVKQGEEFEK 107 Query: 126 QEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFE---RKDVMIHEK----RRQIFL 178 + P + +D + ++R+ R S D E +K + ++ K + Sbjct: 108 KIGAPALLLYIDAKAETMVQRLMKRGQT--SGRSDDNEETIKKRLDLYYKATEPVIAYYE 165 Query: 179 DIARNQPDRCHIVDSAHSFQSVATNILNIVWEL 211 ++S V ++ + EL Sbjct: 166 TR-----GIVRKINSELPVDEVFAIVVKAIDEL 193 >gi|145634347|ref|ZP_01790057.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus influenzae PittAA] gi|229844195|ref|ZP_04464336.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus influenzae 6P18H1] gi|145268327|gb|EDK08321.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus influenzae PittAA] gi|229813189|gb|EEP48877.1| putrescine/spermidine ABC transporter ATPase protein [Haemophilus influenzae 6P18H1] Length = 372 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 16/25 (64%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 +N+G F++ G G GKTT + LL Sbjct: 33 INNGEFVTILGPSGCGKTTVLRLLA 57 >gi|121714775|ref|XP_001274997.1| cell cycle checkpoint protein rad17 [Aspergillus clavatus NRRL 1] gi|119403153|gb|EAW13571.1| cell cycle checkpoint protein rad17 [Aspergillus clavatus NRRL 1] Length = 770 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 14/28 (50%), Positives = 17/28 (60%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFL 28 MN+ + G G+GKTT ISLL FL Sbjct: 177 MNAKKLLVLRGPAGSGKTTTISLLSDFL 204 >gi|157826674|ref|YP_001495738.1| Signal recognition particle protein [Rickettsia bellii OSU 85-389] gi|157801978|gb|ABV78701.1| Signal recognition particle protein [Rickettsia bellii OSU 85-389] Length = 449 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 22/44 (50%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVL 54 G++G+GKTT L L+ +N V + PAA+ +L Sbjct: 109 GLQGSGKTTASGKLALCLKNQNKKVLLVSLDTYRPAAQEQLEIL 152 >gi|260061063|ref|YP_003194143.1| guanylate kinase [Robiginitalea biformata HTCC2501] gi|88785195|gb|EAR16364.1| guanylate kinase [Robiginitalea biformata HTCC2501] Length = 216 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 46/150 (30%), Gaps = 36/150 (24%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVD 60 M G I F G+GKTT + L L++ N ++ + P Sbjct: 1 MAGGKLIVFSAPSGSGKTTIVRHL---LEQPNLNLAFSVSATSRPR-----------RPK 46 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 E E + + H++N E Y+ + ++ L Sbjct: 47 EKHGEHYYFMTVSEFKQHIKNGDFLEWEE--------------VYRDNFYGTLKSEVERL 92 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNR 150 +I D+ V GL R++ + Sbjct: 93 WAEGKN-------VIFDIDVAGGL-RIKKK 114 >gi|331085124|ref|ZP_08334210.1| hypothetical protein HMPREF0987_00513 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407907|gb|EGG87397.1| hypothetical protein HMPREF0987_00513 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 255 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/28 (42%), Positives = 16/28 (57%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQ 29 G FI+ G G GK+T +SL+ LQ Sbjct: 32 KKGEFIAIVGPSGCGKSTLLSLIAGLLQ 59 >gi|324507533|gb|ADY43194.1| Cytoplasmic dynein 2 heavy chain 1 [Ascaris suum] Length = 627 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 29/126 (23%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGV 59 M + + G G GK+T +LKR L N V T P + G Sbjct: 446 MRQRMGVVLVGPSGCGKSTLWKMLKRALAIVNKPVTTYTINPKAISRTKLL-------GY 498 Query: 60 DEFGAEAEA--IVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFL 117 + ++ AAAR V++ + ++CD ++ Sbjct: 499 MDLDTREWFDGVLTAAAR-----EVVKDS-SVDAWIVCD-------------GDIDPEWV 539 Query: 118 DSLQEI 123 ++L + Sbjct: 540 EALNSV 545 >gi|291449135|ref|ZP_06588525.1| ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL 15998] gi|291352082|gb|EFE78986.1| ABC transporter ATP-binding protein [Streptomyces roseosporus NRRL 15998] Length = 274 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 15/76 (19%) Query: 4 GLFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAE--------------- 48 G F++ G G GK+T + L+ L + DV + E P + Sbjct: 51 GEFVAIVGPSGCGKSTLLKLVAGLLTASSGDVLLGGERVSGPRHDIGYVFQRAALLEWRS 110 Query: 49 AARHVLLSCGVDEFGA 64 A R++LL + Sbjct: 111 ALRNILLQAEIRRMEP 126 >gi|281356109|ref|ZP_06242602.1| signal recognition particle protein [Victivallis vadensis ATCC BAA-548] gi|281317478|gb|EFB01499.1| signal recognition particle protein [Victivallis vadensis ATCC BAA-548] Length = 485 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 16/136 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 G+ G+GKTT L L+R V + PAA ++ AE ++ Sbjct: 106 GLHGSGKTTTAGKLALKLKRDGKKVLLVAGDVYRPAAIDQLEIIGKEISVPVHAERTSVN 165 Query: 71 FAAARLDHVENVIRPALMEG-KILLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 AA ++ VE A +G +++ D R + L I Q V Sbjct: 166 VAAIAVNAVEQ----AGRQGFDVVIID---------TAGRLQIDETMVQELVRI-RQAVQ 211 Query: 130 PDCTIILDLPVDIGLK 145 PD ++L +G + Sbjct: 212 PD-EVLLVADAALGQE 226 >gi|229030999|ref|ZP_04187015.1| hypothetical protein bcere0028_30580 [Bacillus cereus AH1271] gi|228730346|gb|EEL81310.1| hypothetical protein bcere0028_30580 [Bacillus cereus AH1271] Length = 289 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 18/36 (50%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTRE 40 I EG+ G GK+T SLL L KN D + E Sbjct: 10 KLIIVEGLPGFGKSTTASLLYDILIEKNIDAELFLE 45 >gi|224025707|ref|ZP_03644073.1| hypothetical protein BACCOPRO_02448 [Bacteroides coprophilus DSM 18228] gi|224018943|gb|EEF76941.1| hypothetical protein BACCOPRO_02448 [Bacteroides coprophilus DSM 18228] Length = 460 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 10/24 (41%), Positives = 14/24 (58%) Query: 2 NSGLFISFEGIEGAGKTTHISLLK 25 N G F++ G G GKTT + L+ Sbjct: 32 NKGEFVTILGPSGCGKTTLLRLIA 55 >gi|163737018|ref|ZP_02144436.1| hypothetical protein RGBS107_02708 [Phaeobacter gallaeciensis BS107] gi|161389622|gb|EDQ13973.1| hypothetical protein RGBS107_02708 [Phaeobacter gallaeciensis BS107] Length = 214 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 60/178 (33%), Gaps = 27/178 (15%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPG---GTPAAEAARHVLLSCGVDE 61 ++ G G+GK+T LL R L + V G + + Sbjct: 27 RLVALAGAPGSGKSTLAELLVRALCAQGTSAAVVPMDGFHLDNRLLSEMDLLARKGAPES 86 Query: 62 FGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQ 121 F + AA ++ E VI P DR D A G + + ++ Sbjct: 87 FDQPGFLRLIAAMAVE--EEVIYPEF--------DRARD--IAIAGAARVDAGVEVAVVE 134 Query: 122 EISVQEVMP---------DCTIILDLPVDIGLKRVQNR---YSLRESACLDYFERKDV 167 + P D ++ +D+P DI +R+ R Y L ++ + E D+ Sbjct: 135 GNYLMFDAPGWRDLAALWDVSVRVDVPRDILRERLVARWQAYGLSDAEAEERAEGNDL 192 >gi|157376092|ref|YP_001474692.1| adenylyl-sulfate kinase [Shewanella sediminis HAW-EB3] gi|157318466|gb|ABV37564.1| Adenylyl-sulfate kinase [Shewanella sediminis HAW-EB3] Length = 228 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 35/144 (24%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 F G+ G+GK+T + + + L + +L G + Sbjct: 54 FTGLSGSGKSTVANAVDKMLHDLGCKTY-----------------VLDGDNVRHGLNGDL 96 Query: 69 IVFAAARLDHVE---NVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSLQE--- 122 A R++++ V + + G ++ S A+ + L + Sbjct: 97 GFSDADRVENIRRIGEVSKLFVDAGLLV--------STAFISPFVEDRESVRAQLSDSQH 148 Query: 123 ISVQEVMPDCTIILDLPVDIGLKR 146 + Q + + +D P+++ +R Sbjct: 149 SNSQFIE----VYIDTPIEVCEQR 168 >gi|311746104|ref|ZP_07719889.1| signal recognition particle protein [Algoriphagus sp. PR1] gi|126576323|gb|EAZ80601.1| signal recognition particle protein [Algoriphagus sp. PR1] Length = 444 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 5/89 (5%) Query: 9 FEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEA 68 G++G+GKTT L L+++ V + PAA VL ++ G E A Sbjct: 104 ISGLQGSGKTTFSGKLASLLKKQGRQVLLVACDIYRPAAIDQLKVL----GEQVGVEVYA 159 Query: 69 IVFAAARLDHVENVIRPALMEG-KILLCD 96 L+ N I A G K ++ D Sbjct: 160 EPENKNALEIANNAIAYAKKSGKKTVIVD 188 >gi|220929212|ref|YP_002506121.1| guanylate kinase [Clostridium cellulolyticum H10] gi|219999540|gb|ACL76141.1| guanylate kinase [Clostridium cellulolyticum H10] Length = 201 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 32/171 (18%) Query: 2 NSGLFISFEGIEGAGKTTHISLLKRFLQRKNYDV-HVTREPGGTPAAEAARHVLLSCGVD 60 GL + G G GK T L Y V TR+P + + Sbjct: 3 QKGLLVVVSGPSGTGKGTVCKKLLSQRDNVRYSVSATTRKPREGEIEGQSYFFVSESKFL 62 Query: 61 EFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 + D + + CD + + +Y DSS +D + Sbjct: 63 DMIKN-----------DALIEWDKY---------CDNYYGTPKSY---VDSSMESGMDII 99 Query: 121 QEISVQEVM------PDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 EI+V+ + PD +I LP + ++ R R + C D E++ Sbjct: 100 LEITVEGALEIKQKYPDSVLIFILPP--SFEELRRRIECRATECTDVIEKR 148 >gi|124805382|ref|XP_001350424.1| XPA binding protein 1, putative [Plasmodium falciparum 3D7] gi|23496546|gb|AAN36104.1|AE014844_15 XPA binding protein 1, putative [Plasmodium falciparum 3D7] Length = 497 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 13/102 (12%) Query: 7 ISFEGIEGAGKTTHISLLKRFLQRKNYD----------VHVTREPGGTPAAEAAR--HVL 54 I G+ G+GKTT++ L +L+ + V + P ++ + ++ Sbjct: 211 IVI-GMAGSGKTTYVGSLYNYLKVEQKKKVYTMNLDPAVKYVQYPLNIDIRDSIKYHEIM 269 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCD 96 + GA + A R D V ++ + ++ D Sbjct: 270 KEYKLGPNGAIMTCLNLFATRFDKVIEILEKRKSKLHYIIVD 311 >gi|59802367|ref|YP_209079.1| putative signal recognition particle protein [Neisseria gonorrhoeae FA 1090] gi|59719262|gb|AAW90667.1| putative signal recognition particle protein [Neisseria gonorrhoeae FA 1090] Length = 421 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 6/87 (6%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI GAGKTT I L ++ Q + V + G T A A + G + ++ Sbjct: 228 GINGAGKTTSIGKLAKYFQAQGKSVLLAA--GDTFRAAAREQLQAWGGRNNVTVISQT-- 283 Query: 71 FAAARLDHVENVIRPALMEG-KILLCD 96 + ++ A G I+L D Sbjct: 284 -TGDSAAVCFDAVQAAKARGIDIVLAD 309 >gi|13507794|ref|NP_109743.1| spermidine/putrescine transport ATP-binding prot [Mycoplasma pneumoniae M129] gi|2492551|sp|P75059|POTA_MYCPN RecName: Full=Spermidine/putrescine import ATP-binding protein PotA gi|1673754|gb|AAB95747.1| spermidine/putrescine transport ATP-binding prot [Mycoplasma pneumoniae M129] gi|301633292|gb|ADK86846.1| ABC transporter, ATP-binding protein [Mycoplasma pneumoniae FH] Length = 560 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/25 (44%), Positives = 14/25 (56%) Query: 1 MNSGLFISFEGIEGAGKTTHISLLK 25 + G FI+ G G GKTT + LL Sbjct: 30 IKKGEFITILGPSGCGKTTTLRLLA 54 >gi|327313920|ref|YP_004329357.1| dephospho-CoA kinase [Prevotella denticola F0289] gi|326945418|gb|AEA21303.1| dephospho-CoA kinase [Prevotella denticola F0289] Length = 187 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 29/171 (16%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVH----------VTREPGGTPAAEAARHVL 54 + ++ G G+GK+ LL + +V+ T P E + Sbjct: 1 MIVALTGGIGSGKSYVCRLLAE----RGIEVYDCDAHAKELMRTSPPLRQQLKELVGDSV 56 Query: 55 LSCGVDEFGAEAEAIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQH 114 G+ + AE ++ + V VI PA + CD F S ++ Sbjct: 57 FRDGILQKSVLAEFLLRSDRHTQAVNAVIHPA------VACD-FEQSGLSWLESAILFDS 109 Query: 115 LFLDSLQEISVQEVMPDCTIILDLPVDIGLKRVQNRYSLRESACLDYFERK 165 F D + + P ++ ++RV R + L++ R+ Sbjct: 110 GFDRRTHI--------DKVVCVTAPAEVRIRRVMERDGISREKALEWMARQ 152 >gi|326385130|ref|ZP_08206799.1| LuxR family transcriptional regulator [Gordonia neofelifaecis NRRL B-59395] gi|326196163|gb|EGD53368.1| LuxR family transcriptional regulator [Gordonia neofelifaecis NRRL B-59395] Length = 856 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 22/71 (30%) Query: 6 FISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAE 65 FI G GK+T + L L+ + V E + A VLL D Sbjct: 29 FILITAPSGGGKSTVLRRLSETLRGRGVRVAGGAEHDPASLFDGAPAVLLIDDADRSDPN 88 Query: 66 AEAIVFAAARL 76 + A Sbjct: 89 TLHRLHELADA 99 >gi|308494915|ref|XP_003109646.1| hypothetical protein CRE_07487 [Caenorhabditis remanei] gi|308245836|gb|EFO89788.1| hypothetical protein CRE_07487 [Caenorhabditis remanei] Length = 210 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 31/219 (14%), Positives = 66/219 (30%), Gaps = 41/219 (18%) Query: 5 LFISFEGIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGV--DEF 62 FI G G+GK T + + + R + S + Sbjct: 23 FFIV--GGPGSGKGTQCD-----------KIVAKYGLTHLSSGDLLRDEVKSGSPRGSQL 69 Query: 63 GAEAE--AIVFAAARLDHVENVIRPALMEGKILLCDRFLDSSYAYQGERDSSQHLFLDSL 120 A E A+V LD V+ + A+ +G FL Y + + + Sbjct: 70 TAIMESGALVPLEVVLDLVKEAMLKAIEKG----SKGFLIDGYPREVAQGQQFESEIQEA 125 Query: 121 QEISVQEVMPDCTIILDLPVDIGLKRVQNRY--SLRESACLDYFERKDVMIHEK---RRQ 175 + + D+ D +KR+ +R S R +D +++ Sbjct: 126 K----------LVLFFDVAEDTLVKRLLHRAQTSGRADDNIDTIKKRLHTFVTSTAPVVD 175 Query: 176 IFLDIARNQPDRCHIVDSAHSFQSVATNILNIVWELVQK 214 + + +++ S + ++ + ++ K Sbjct: 176 YY-----ESKGKLVRINAEGSVDDIFGVVVANLDKVTSK 209 >gi|298708560|emb|CBJ30645.1| SRP101, alpha subunit of the signal recognition particle receptor [Ectocarpus siliculosus] Length = 589 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 15/126 (11%) Query: 11 GIEGAGKTTHISLLKRFLQRKNYDVHVTREPGGTPAAEAARHVLLSCGVDEFGAEAEAIV 70 GI G GK+T ++ + +L+ V + T + A + + C + + Sbjct: 390 GINGVGKSTSLAKVAYYLKENGIKVLIAA--CDTFRSGAVEQLRVHCRCLDVPLFEKG-- 445 Query: 71 FAAARLDHVENVIRPALMEGKI-LLCDRFLDSSYAYQGERDSSQHLFLDSLQEISVQEVM 129 +A ++ A EG +L D R + + +L ++ + E Sbjct: 446 YARDSSAVAREAVKHAAEEGYDCVLID---------TAGRMQNNEPLMRALSKL-INENE 495 Query: 130 PDCTII 135 P+ + Sbjct: 496 PELVLF 501 >gi|268317894|ref|YP_003291613.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252] gi|262335428|gb|ACY49225.1| deoxynucleoside kinase [Rhodothermus marinus DSM 4252] Length = 217 Score = 37.7 bits (87), Expect = 1.2, Method: Composition-