HHsearch alignment for GI: 254780222 and conserved domain: COG5000

>COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms].

Probab=95.43  E-value=0.03  Score=34.76  Aligned_cols=41  Identities=10%  Similarity=0.155  Sum_probs=23.5

Q ss_pred             EEEEECCCC--CCHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHH
Q ss_conf             999866410--26798999999880798-------168999999752467
Q gi|254780222|r  641 LRVEINKDL--NSLKDTQDSINKLMGTK-------ADERFKFIQERASFI  681 (686)
Q Consensus       641 ~~v~~~~~~--~~~~~~~~~f~~lmG~~-------~~~RK~wi~~~~~~~  681 (686)
T Consensus       640 i~v~V~DNGkG~p~e~r~r~~EPYvTtr~KGTGLGLAiVKkIvEeHGG~l  689 (712)
T COG5000         640 IVVDVIDNGKGFPRENRHRALEPYVTTREKGTGLGLAIVKKIVEEHGGRL  689 (712)
T ss_pred             EEEEEECCCCCCCHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCEE
T ss_conf             99998108987996786432367142165666623999999999638827