HHsearch alignment for GI: 254780222 and conserved domain: PRK05644

>PRK05644 gyrB DNA gyrase subunit B; Validated.
Probab=100.00  E-value=0  Score=1757.68  Aligned_cols=633  Identities=44%  Similarity=0.731  Sum_probs=602.1

Q ss_pred             CCCCCCCCHHHEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCC
Q ss_conf             76312369756023112103432698154677755022024436666787776189976999982898399996698434
Q gi|254780222|r   38 QSASDNYDASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLDGNGFLTVVDNGRGIP  117 (686)
Q Consensus        38 ~~~~~~Y~~~~i~~L~glE~VrkRP~mYIGst~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~dg~IsV~ddGrGIP  117 (686)
T Consensus         5 ~~~~~~Y~~~~I~vL~gle~VRkRPgMYiG~t~~~glhhlv~EvvDNsiDEa~aG~~~~I~V~i~~DgsitV~DnGRGIP   84 (725)
T PRK05644          5 EMMENEYDASSIKVLEGLEAVRKRPGMYIGDTGGRGLHHLVYEVVDNSIDEALAGYCDEIEVTIHADGSVSVTDNGRGIP   84 (725)
T ss_pred             HHHHCCCCHHHCEECCCCHHHCCCCCCEECCCCCCCCEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCC
T ss_conf             47566789644845037575505986465669998766889864214787986389967999996898299998997677


Q ss_pred             CCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEECCCCCHHHHHHHHEEEEEEEEEECCCEEEEEEEECCCEECCCEECC
Q ss_conf             44176657870123454520024777777415631445388987620321269999418838999972794511311216
Q gi|254780222|r  118 VENHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGGLHGVGISVVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKE  197 (686)
Q Consensus       118 v~~h~k~~~~~~~Elif~~L~aggnfdd~~yk~sgGlnGvGaklvNalS~~f~Vev~r~gk~y~q~f~~g~~~~~~~~i~  197 (686)
T Consensus        85 vd~h~~-~~~~~~E~I~t~LhAGgKFd~~~YkvSGGLHGVGasvVNALS~~~~VeV~RdGk~y~q~f~~G~~~~~l~~ig  163 (725)
T PRK05644         85 VDIHPK-EGVSAAEVVMTVLHAGGKFDGNSYKVSGGLHGVGVSVVNALSEWLELTVRRDGKIHRQEFERGVPVAPLKVIG  163 (725)
T ss_pred             CCCCCC-CCCCHHHHEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCEEEEEEEECCEEEEEEEECCCCCCCCEECC
T ss_conf             634577-7972261300003556689999635316888802032160547089999989999999972897588852467


Q ss_pred             CCCCCCCEEEEEEECHHHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCHHHHHCCC
Q ss_conf             76778853999998424320012222899999888875305773599951645322245541123431586122210024
Q gi|254780222|r  198 KVRNKRGTRITFRPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFPGGLKTYLQTKL  277 (686)
Q Consensus       198 ~~~~k~GT~ItF~PD~~iFg~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~~~~~~~~~~~~~~f~~~~Gi~dyv~~~~  277 (686)
T Consensus       164 ~~-~k~GT~ItF~PD~~iF~~-~~fd~d~L~~RlrelA~Ln~GL~I~l~Der~-----~~~~~~~f~y~gGi~dyv~~l~  236 (725)
T PRK05644        164 ET-DKTGTTVRFWPDPEIFTT-TEFDYETLAKRLRELAFLNSGVKITLTDERE-----GEGKEETFHYEGGIKSFVEYLN  236 (725)
T ss_pred             CC-CCCCEEEEEEECHHHCCC-CCCCHHHHHHHHHHHHHCCCCCEEEEEECCC-----CCCCEEEEEECCCHHHHHHHHH
T ss_conf             88-889659999977566177-4408999999999997217984799864577-----8776148971476788898862


Q ss_pred             CCCCCCCCCCEEEEEEECCCEEEEEEEEEEECCCCCC-EEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHCCC--CCC
Q ss_conf             6776667752033332148015589998541467774-2788830006557524130467899999987630188--332
Q gi|254780222|r  278 ENRSLISSEIFTGKTEKKGTHRGTVEWAIAWCEENPE-ITSYCNTILTDEGGTHESGLRVALTRGIKKYAELTQN--KRA  354 (686)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~veval~~~~~~~~-~~SFVN~I~T~~GGTHv~g~~~ai~k~i~~~~~~~~~--kk~  354 (686)
T Consensus       237 ~~k~~l~~~~i~~~~e~~~---i~vEvAlqw~d~~~e~i~SFvN~I~T~eGGTHv~Gfr~aLtr~In~ya~~~~l~Kk~~  313 (725)
T PRK05644        237 RNKTPLHPEIIYFEGEKDG---IGVEVAMQWNDSYSENVLCFTNNIPTRDGGTHLAGFRAALTRVINDYARKNGLLKKAK  313 (725)
T ss_pred             CCCCCCCCCCEEEEEEECC---EEEEEEEEECCCCCCEEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             5787678885589986478---0699999854776631455421435588981889999999999999999837543344


Q ss_pred             CCCCCCCCCCCEEEEEEEEEEHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             22332222364269999776345607644662025232000012101588999774013568899999999996545443
Q gi|254780222|r  355 ISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRRK  434 (686)
Q Consensus       355 ~~i~~~dIk~~L~~~Isv~I~nP~FesQTKekL~s~~~~~~v~~~i~~~l~~~l~~n~~~a~~I~~~~~~~a~~r~~~~k  434 (686)
T Consensus       314 ~~itgdDIregL~~vISvki~nPqFegQTKeKLgn~ev~~~V~~~v~e~l~~~l~~np~~ak~Ii~k~~~aa~aR~aa~k  393 (725)
T PRK05644        314 VNLTGDDVREGLTAVISVKVPDPQFEGQTKTKLGNSEVRPIVESLVNEALSEFLEENPNEAKIIVGKAIEAARAREAARK  393 (725)
T ss_pred             CCCCHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             56656777603079999861698747731030158546788999999889999887979899999999999999999997


Q ss_pred             HHHH-HHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCEEEEEECCEECCHHHHHHHHHHCCHHH
Q ss_conf             3444-221100245653335677656554037997327676421001011222012211231314454108776322889
Q gi|254780222|r  435 QREV-NRKTAIRKLRLPGKLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLRGKILNVASAGSEKIRNNQQI  513 (686)
Q Consensus       435 ~k~~-~rk~~~~~~~lpgKL~Da~~~~~~~~eL~lvEGDSA~gsAk~grdr~~qgi~PLRGKiLNv~~as~~ki~~N~Ei  513 (686)
T Consensus       394 are~~rrK~~~~~~~LPGKL~Dc~skd~~~~ELfiVEGDSAgGsAkqgRdr~~QAIlPLRGKiLNv~ka~~~ki~~N~EI  473 (725)
T PRK05644        394 ARELTRRKSALDSAGLPGKLADCQSKDPAKSELYIVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARFDKILSSEEI  473 (725)
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHCCHHH
T ss_conf             68765202212357898755465568977767999825788863103356574688641672200200679888618799


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEECCEEEEECC
Q ss_conf             99998825665433333465525189997798771468899999999870888633938993099699974897999378
Q gi|254780222|r  514 MDLVQALGCRTRSQYREEDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLISPPLFRITQGTKSVYAHD  593 (686)
Q Consensus       514 ~~l~~~lGl~~g~~~~~~~LRYgkIiImTDaD~DGsHI~~Lll~ff~~~~p~Li~~g~v~~~~tPl~kv~~g~~~~y~~~  593 (686)
T Consensus       474 ~~li~alG~g~g~~fd~~~LRY~kIiIMTDADvDGsHIrtLLlTfF~r~m~~LIe~G~vYiAqPPLyki~~gk~~~Y~~~  553 (725)
T PRK05644        474 GTLITALGTGIGRDFDIDKLRYHKIIIMTDADVDGAHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKKGKQEQYLKD  553 (725)
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCEEEEECC
T ss_conf             99999967788865771127747089997899876899999999999999999975938992596159852981488379


Q ss_pred             HHHHHHHHHHHH--------------------------------------------------------------------
Q ss_conf             999999999877--------------------------------------------------------------------
Q gi|254780222|r  594 EEHKQKILEEFK--------------------------------------------------------------------  605 (686)
Q Consensus       594 e~e~~~~~~~~~--------------------------------------------------------------------  605 (686)
T Consensus       554 d~e~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  633 (725)
T PRK05644        554 DRELDEYLIELALEGATLHAIAGEALEKLVKEYRAVRKVIDRLSRRYPRALLEALATNAERELFELRVERRTHVYVLDHD  633 (725)
T ss_pred             HHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCC
T ss_conf             99999999973205625520460778999999999999998764304467888875211012232001211011224555


Q ss_pred             ---------------HCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHH
Q ss_conf             ---------------41788607868506778898899886039400079999866410267989999998807981689
Q gi|254780222|r  606 ---------------KHGKGKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMGTKADER  670 (686)
Q Consensus       606 ---------------~~~~~k~~i~ryKGLGe~~~~e~~et~~~p~~r~l~~v~~~~~~~~~~~~~~~f~~lmG~~~~~R  670 (686)
T Consensus       634 ~~~~~~~~~~~~~~~~~~~k~~~IqRyKGLGEMnp~qLweTTMdP~~R~L~~V~i~d----a~~ad~~f~~LMG~~v~~R  709 (725)
T PRK05644        634 EQPVSSFEEALDWLLAEGRKGLTIQRYKGLGEMNPEQLWETTMDPEVRRLLQVTIED----AIAADEIFTTLMGDEVEPR  709 (725)
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEECHH----HHHHHHHHHHHCCCCCHHH
T ss_conf             312478899999999730578802227606766978998636583013599987023----9999999998659995688


Q ss_pred             HHHHHHHHHHHHHCC
Q ss_conf             999997524677517
Q gi|254780222|r  671 FKFIQERASFIDDVG  685 (686)
Q Consensus       671 K~wi~~~~~~~~~ld  685 (686)
T Consensus       710 r~fI~~na~~v~~lD  724 (725)
T PRK05644        710 REFIEENALDVRNLD  724 (725)
T ss_pred             HHHHHHHHHHHHHCC
T ss_conf             999999851303348