HHsearch alignment for GI: 254780222 and conserved domain: PRK11091
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional.
Probab=92.80 E-value=0.15 Score=29.89 Aligned_cols=107 Identities=21% Similarity=0.329 Sum_probs=59.6
Q ss_pred CCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC-CC-C--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 698154677755022024436666787776189976999982-89-8--3999966984344417665787012345452
Q gi|254780222|r 61 RPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLD-GN-G--FLTVVDNGRGIPVENHPKFPNKSTLEIILTT 136 (686)
Q Consensus 61 RP~mYIGst~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~-~d-g--~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~ 136 (686)
T Consensus 388 lP~~v~g--D~~RLrQIL~NLlsNAIKFT~~G---~V~l~v~~~~~~~l~f~V~DTGiGI~~e~l~---~IF~---~F~Q 456 (779)
T PRK11091 388 LPHKVIT--DGTRLRQILWNLISNAVKFTQQG---QVTVRVRYEDGDMLHFEVEDSGIGIPEDELD---KIFA---MYYQ 456 (779)
T ss_pred CCCEEEC--CHHHHHHHHHHHHHHHHHCCCCC---CEEEEEEECCCCEEEEEEEECCCCCCHHHHH---HHHC---CCEE
T ss_conf 9862863--89999999999999997738999---7799999827988999999579999999999---8705---7560
Q ss_pred EECCCCCCCCCEEEECCCCCHHHHHHHHEEEEEE----EEEEC-CCEEEEEEE
Q ss_conf 0024777777415631445388987620321269----99941-883899997
Q gi|254780222|r 137 LHAGGKFDNSTYEISGGLHGVGISVVNALSDELH----VTVAR-QNTIFSQKF 184 (686)
Q Consensus 137 L~aggnfdd~~yk~sgGlnGvGaklvNalS~~f~----Vev~r-~gk~y~q~f 184 (686)
T Consensus 457 ~~~------s~~~r~~~GTGLGLaI~k~LvelMGG~I~V~S~~G~GStFt~~L 503 (779)
T PRK11091 457 VKD------SHGGKPATGTGIGLAVSRRLAQNMGGDITVTSEEGKGSTFTLTI 503 (779)
T ss_pred CCC------CCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEE
T ss_conf 667------87776778876079999999998499799995599871799999