HHsearch alignment for GI: 254780222 and conserved domain: PRK13557
>PRK13557 histidine kinase; Provisional.
Probab=92.88 E-value=0.13 Score=30.43 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=24.1
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEC---CCCEEEEEECC
Q ss_conf 54677755022024436666787776189976999982---89839999669
Q gi|254780222|r 65 YIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLD---GNGFLTVVDNG 113 (686)
Q Consensus 65 YIGst~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~---~dg~IsV~ddG 113 (686)
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~~-~~---~~~-~~~d~~~~Dg~I~~vN~a 59 (538)
T PRK13557 13 PVDESAAGDVSDHRSDIFFAAVET-TR---MPM-IVTDPRQPDNPIVFANRA 59 (538)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHH-CC---CCE-EEECCCCCCCEEEEECHH
T ss_conf 999886410567889999999960-79---738-993589999879998399