HHsearch alignment for GI: 254780222 and conserved domain: TIGR02938
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL; InterPro: IPR014285 NifL modulates the activity of the nitrogen fixation positive regulator protein NifA, acting as a negative regulator by binding NifA. NifA and NifL are encoded by adjacent genes..
Probab=96.52 E-value=0.0024 Score=42.24 Aligned_cols=50 Identities=26% Similarity=0.492 Sum_probs=23.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCC-CCE--EEEEEC-CCC--EEEEEECCCCCCCCCC
Q ss_conf 55022024436666787776189-976--999982-898--3999966984344417
Q gi|254780222|r 71 EKALHHLFSEVIDNAMDEVIAGY-ANL--IEVSLD-GNG--FLTVVDNGRGIPVENH 121 (686)
Q Consensus 71 ~~GL~~i~~EIldNavDe~~~g~-~~~--I~V~i~-~dg--~IsV~ddGrGIPv~~h 121 (686)
T Consensus 386 e~~lRslfK~LvdNAIe-aM~~~~~~RREL~i~t~~~~~li~~~i~DsGPGIP~dlr 441 (496)
T TIGR02938 386 ESRLRSLFKALVDNAIE-AMAQKGVKRRELSILTAVEDDLIRVEIEDSGPGIPADLR 441 (496)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCC
T ss_conf 52578999999999999-853078410231010223085689999735879872442