HHsearch alignment for GI: 254780222 and conserved domain: TIGR02966
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR; InterPro: IPR014310 Members of this protein are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter found in most Proteobacteria, and related proteins from Gram-positive organisms are excluded. The phoR gene usually is adjacent to the response regulator phoB gene (IPR011879 from INTERPRO)..
Probab=93.56 E-value=0.19 Score=29.16 Aligned_cols=100 Identities=24% Similarity=0.333 Sum_probs=58.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHC--CCCCEEEEEECCC--C-EEEEEECCCCCCCCCCCCCCCCEEE-EEEEEEEECCCCCC
Q ss_conf 550220244366667877761--8997699998289--8-3999966984344417665787012-34545200247777
Q gi|254780222|r 71 EKALHHLFSEVIDNAMDEVIA--GYANLIEVSLDGN--G-FLTVVDNGRGIPVENHPKFPNKSTL-EIILTTLHAGGKFD 144 (686)
Q Consensus 71 ~~GL~~i~~EIldNavDe~~~--g~~~~I~V~i~~d--g-~IsV~ddGrGIPv~~h~k~~~~~~~-Elif~~L~aggnfd 144 (686)
T Consensus 229 ~~G~e~~L~SAf~NLv~NAikYTp~gg~I~v~W~~~~~ga~fsV~DtG~GI~~e------HipRLTERFYRV-------D 295 (339)
T TIGR02966 229 LLGNEDELRSAFSNLVSNAIKYTPEGGTITVRWRRDEGGAEFSVTDTGIGIAPE------HIPRLTERFYRV-------D 295 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCEEEEEEEECCCCCCHH------HCCCCCCEEEEE-------C
T ss_conf 014477799999999887530089988799999985780399998779898731------377542001230-------5
Q ss_pred CCCEEEECCCCCHHHHHH----HHEEEEEEEEEECC-CEEEEEEE
Q ss_conf 774156314453889876----20321269999418-83899997
Q gi|254780222|r 145 NSTYEISGGLHGVGISVV----NALSDELHVTVARQ-NTIFSQKF 184 (686)
Q Consensus 145 d~~yk~sgGlnGvGaklv----NalS~~f~Vev~r~-gk~y~q~f 184 (686)
T Consensus 296 ~~RSR~tGG-TGLGLAIVKH~L~rH~a~L~I~Se~G~GS~F~~~F 339 (339)
T TIGR02966 296 KSRSRDTGG-TGLGLAIVKHVLSRHHARLEIESELGKGSTFSFIF 339 (339)
T ss_pred HHHCCCCCC-CCCHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEC
T ss_conf 334157889-84336899998741487899998853760688759