HHsearch results for GI: 254780222 and protein with PDBid: 1gkz_A
>1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A*
Probab=97.63 E-value=3.7e-05 Score=53.23 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCC------CCEEEEEECCC-C--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCC
Q ss_conf 55022024436666787776189------97699998289-8--399996698434441766578701234545200247
Q gi|254780222|r 71 EKALHHLFSEVIDNAMDEVIAGY------ANLIEVSLDGN-G--FLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGG 141 (686)
Q Consensus 71 ~~GL~~i~~EIldNavDe~~~g~------~~~I~V~i~~d-g--~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~L~agg 141 (686)
+.-|.+++.|+|.||++-...++ ...|.|++..+ . .|+|.|+|.|||-+.-+ .++- --||.--++.
T Consensus 236 p~~L~~il~NLL~NAikat~e~~~~~~~~~p~I~v~i~~~~~~v~I~I~D~G~GIp~e~l~---~IF~--~fyTT~~~~~ 310 (388)
T 1gkz_A 236 PMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLIIRISDRGGGIAHKDLD---RVMD--YHFTTAEAST 310 (388)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCTTCTTSCCCEEEEEEECSSEEEEEEECCSCCCCTTTTT---TTTS--TTCCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCHHHHH---HHCC--CCCCCCCCCC
T ss_conf 8999999999999999997716755577788479999715886999998699987999998---7627--5524676555
Q ss_pred ------------CCCCCCEEEECCCCCHHHHHHHHEEEEE
Q ss_conf ------------7777741563144538898762032126
Q gi|254780222|r 142 ------------KFDNSTYEISGGLHGVGISVVNALSDEL 169 (686)
Q Consensus 142 ------------nfdd~~yk~sgGlnGvGaklvNalS~~f 169 (686)
.+.+....-.-+=.|+|..++..+.+.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~G~GlGL~isr~~ae~~ 350 (388)
T 1gkz_A 311 QDPRISPLFGHLDMHSGGQSGPMHGFGFGLPTSRAYAEYL 350 (388)
T ss_dssp ---------------------CCSCSSCHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHC
T ss_conf 5543333212111135566789888704499999999986