HHsearch results for GI: 254780222 and protein with PDBid: 1h7s_A
>1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A*
Probab=99.41 E-value=3.2e-12 Score=101.69 Aligned_cols=182 Identities=22% Similarity=0.318 Sum_probs=125.1
Q ss_pred CHHHEEECCCCHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--CEEEEEECCCCCCCCCCC
Q ss_conf 975602311210343269815467775502202443666678777618997699998289--839999669843444176
Q gi|254780222|r 45 DASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVSLDGN--GFLTVVDNGRGIPVENHP 122 (686)
Q Consensus 45 ~~~~i~~L~glE~VrkRP~mYIGst~~~GL~~i~~EIldNavDe~~~g~~~~I~V~i~~d--g~IsV~ddGrGIPv~~h~ 122 (686)
.+.+|+.|..--.-+.+-|-+|=+ +..++.|+|+||+| || |++|.|.++.. ++|+|.|||.|||-+
T Consensus 11 ~~~~I~~L~~~~~~~i~s~~vi~~-----~~svvkELieNSiD---A~-At~I~I~v~~~g~~~I~V~DnG~Gi~~~--- 78 (365)
T 1h7s_A 11 PAKAIKPIDRKSVHQICSGQVVLS-----LSTAVKELVENSLD---AG-ATNIDLKLKDYGVDLIEVSDNGCGVEEE--- 78 (365)
T ss_dssp ------------------CEEECC-----HHHHHHHHHHHHHH---TT-CSEEEEEEEGGGTSEEEEEECSCCCCGG---
T ss_pred CCCCCEECCHHHHHHHCCCCEECC-----HHHHHHHHHHHHHC---CC-CCEEEEEEECCCEEEEEEEECCCCCCHH---
T ss_conf 987776199899988289773468-----88999999977872---89-8889999987984389999899875989---
Q ss_pred CCCCCEEEEEEEEEEECCC--CCCCCCEEEECCCCCHHHHHHHHEEEEEEEEEE-CCC-EEEEEEEECCCEECCCEECCC
Q ss_conf 6578701234545200247--777774156314453889876203212699994-188-389999727945113112167
Q gi|254780222|r 123 KFPNKSTLEIILTTLHAGG--KFDNSTYEISGGLHGVGISVVNALSDELHVTVA-RQN-TIFSQKFSRGIPLSPLEKKEK 198 (686)
Q Consensus 123 k~~~~~~~Elif~~L~agg--nfdd~~yk~sgGlnGvGaklvNalS~~f~Vev~-r~g-k~y~q~f~~g~~~~~~~~i~~ 198 (686)
.+ ++++..-+|+. +++|-....|.|.+|.+++...+.|. +++.+. .++ ..|+..+.++..... .+.
T Consensus 79 ---dl---~~~~~~~~tsk~~~~~d~~~~~t~GfRGeaL~si~~~s~-~~i~S~~~~~~~~~~~~~~~~~~~~~---~~~ 148 (365)
T 1h7s_A 79 ---NF---EGLTLKHHTSKIQEFADLTQVETFGFRGEALSSLCALSD-VTISTCHASAKVGTRLMFDHNGKIIQ---KTP 148 (365)
T ss_dssp ---GS---GGGGC----------CCTTCSEEESSSSSHHHHHHHHSE-EEEEEECTTCSSCEEEEECTTSCEEE---EEE
T ss_pred ---HH---HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC-EEEEEECCCCCHHEEEEEECCCCCCC---CCC
T ss_conf ---98---645420236776623365334557742278888886245-15888438974334999824665322---356
Q ss_pred CCCCCCEEEEEEE----CH---HHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
Q ss_conf 6778853999998----42---43200122228999998888753057735999516
Q gi|254780222|r 199 VRNKRGTRITFRP----DP---KIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCD 248 (686)
Q Consensus 199 ~~~k~GT~ItF~P----D~---~iFg~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~ 248 (686)
+....||+|+..= -+ +.|..........+...++..|..+|++.+.+.+.
T Consensus 149 ~~~~~GTtV~v~~lF~n~PvRrk~~~k~~~~e~~~i~~~v~~~Al~~p~V~f~l~~~ 205 (365)
T 1h7s_A 149 YPRPRGTTVSVQQLFSTLPVRHKEFQRNIKKEYAKMVQVLHAYCIISAGIRVSCTNQ 205 (365)
T ss_dssp CCCCSEEEEEEESTTTTSHHHHHHHHHTHHHHHHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
T ss_conf 446787589996133577224332135205899999998765522279647999973