HHsearch results for GI: 254780222 and protein with PDBid: 1r62_A
>1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transferase; 1.60A {Escherichia coli K12} SCOP: d.122.1.3
Probab=94.46 E-value=0.11 Score=29.24 Aligned_cols=79 Identities=24% Similarity=0.431 Sum_probs=47.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCC-------EEEEEECC--C-C--EEEEEECCCCCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 775502202443666678777618997-------69999828--9-8--3999966984344417665787012345452
Q gi|254780222|r 69 TDEKALHHLFSEVIDNAMDEVIAGYAN-------LIEVSLDG--N-G--FLTVVDNGRGIPVENHPKFPNKSTLEIILTT 136 (686)
Q Consensus 69 t~~~GL~~i~~EIldNavDe~~~g~~~-------~I~V~i~~--d-g--~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~ 136 (686)
.+..-|.++|.-+|.||++....+... ...+.+.. + . .|+|.|||.|||-+.. +.++.|
T Consensus 44 ~D~~~l~qvl~NLl~NAi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~V~D~G~GI~~~~~---~~iF~p------ 114 (160)
T 1r62_A 44 HDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQ---DTLFYP------ 114 (160)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHGGGCEEEEEEEEEEEEEEETTEEEEEEEEEEEEEECTTC--------------------
T ss_pred ECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEECCCCCCEEEEEECCCCCCCCHHHH---HHHCCC------
T ss_conf 88999999999999999985036896168864102303430235684689997878897798999---972787------
Q ss_pred EECCCCCCCCCEEEECCCCCHHHHHHHHEE
Q ss_conf 002477777741563144538898762032
Q gi|254780222|r 137 LHAGGKFDNSTYEISGGLHGVGISVVNALS 166 (686)
Q Consensus 137 L~aggnfdd~~yk~sgGlnGvGaklvNalS 166 (686)
..+ +| .+| .|+|.++|.-+-
T Consensus 115 f~t-~k--------~~G-~GLGL~i~~~iv 134 (160)
T 1r62_A 115 MVS-GR--------EGG-TGLGLSIARNLI 134 (160)
T ss_dssp -------------------CHHHHHHHHHH
T ss_pred CEE-CC--------CCC-CCCCHHHHHHHH
T ss_conf 220-48--------899-866199999999