HHsearch results for GI: 254780222 and protein with PDBid: 1yc1_A
>1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A*
Probab=97.90 E-value=0.00013 Score=49.40 Aligned_cols=160 Identities=19% Similarity=0.269 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHH--HH-----C-------CCCCEEEEEECCC-CEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECC
Q ss_conf 0244366667877--76-----1-------8997699998289-839999669843444176657870123454520024
Q gi|254780222|r 76 HLFSEVIDNAMDE--VI-----A-------GYANLIEVSLDGN-GFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAG 140 (686)
Q Consensus 76 ~i~~EIldNavDe--~~-----~-------g~~~~I~V~i~~d-g~IsV~ddGrGIPv~~h~k~~~~~~~Elif~~L~ag 140 (686)
-.+.|+|.||+|- ++ . ++.-.|.|..+.+ ++++|.|||-|+--+.-.+ -+|+.-.|
T Consensus 71 IFLRELIsNAsDAi~k~r~~~~~~~~~~~~~~~~~I~i~~d~~~~tl~I~DnGiGMt~~el~~---------~lgtIa~S 141 (264)
T 1yc1_A 71 IFLRELISNSSDALDKIRYETLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLIN---------NLGTIAKS 141 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGGGGCCCCCEEEEEETTTTEEEEEECSCCCCHHHHHH---------HHHSCTTS
T ss_pred EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHH---------HCCCHHCC
T ss_conf 008888857999999999986539522467987369998768888899996898777999997---------61650014
Q ss_pred CC--C----CCCCEEEECCCCCHHHHHHHHEEEEEEEEEECCC-EEEEEEEECCCEECCCEECCCCCCCCCEEEEEEECH
Q ss_conf 77--7----7774156314453889876203212699994188-389999727945113112167677885399999842
Q gi|254780222|r 141 GK--F----DNSTYEISGGLHGVGISVVNALSDELHVTVARQN-TIFSQKFSRGIPLSPLEKKEKVRNKRGTRITFRPDP 213 (686)
Q Consensus 141 gn--f----dd~~yk~sgGlnGvGaklvNalS~~f~Vev~r~g-k~y~q~f~~g~~~~~~~~i~~~~~k~GT~ItF~PD~ 213 (686)
|. | .+....--.|+-|||.-.|=..+.+.+|.+...+ ..+...|..+-.- ........+..+||+|+-.+..
T Consensus 142 g~~~f~~~~~~~~d~~~IGqFGVGFyS~FMVAdkV~V~Trs~~~~~~~w~s~~~g~~-~~~~~~~~~~~~GT~I~L~Lk~ 220 (264)
T 1yc1_A 142 GTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSF-TVRTDTGEPMGRGTKVILHLKE 220 (264)
T ss_dssp CHHHHHHHHHTTCCGGGGGGGTCGGGGHHHHEEEEEEEEECTTSCCEEEEECSTTEE-EEEECCSSCCSSEEEEEEEECG
T ss_pred CCHHHHHHHHHCCCCCEECCCCCCEEEECCCCCEEEEEECCCCCCCCEEEEEECCCE-EEEECCCCCCCCCCEEEEEECC
T ss_conf 638889875402564400001522122023477579997589986443786406872-7996777889999489999688
Q ss_pred HHEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf 432001222289999988887530577359995164
Q gi|254780222|r 214 KIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWSCDK 249 (686)
Q Consensus 214 ~iFg~~~~~d~~~l~~rl~~~A~L~~gl~i~~~~~~ 249 (686)
+- .+ -++.+.|...++..+-..+ ..|.+.+++
T Consensus 221 d~-~E--fle~~rl~~lIkkYS~fI~-~PI~l~~e~ 252 (264)
T 1yc1_A 221 DQ-TE--YLEERRIKEIVKKHSQFIG-YPITLFVEK 252 (264)
T ss_dssp GG-GG--GGSHHHHHHHHHHHTTTCS-SCEEECCCC
T ss_pred CH-HH--HCCHHHHHHHHHHHHHCCC-CCEEEEECC
T ss_conf 72-78--6699899999998763668-686996067