BLAST/PSIBLAST alignment of GI: 254780222 and GI: 116252261 at iteration 1
>gi|116252261|ref|YP_768099.1| DNA topoisomerase IV subunit B [Rhizobium leguminosarum bv. viciae 3841] Length = 700
>gi|115256909|emb|CAK08003.1| putative DNA gyrase subunit B [Rhizobium leguminosarum bv. viciae 3841] Length = 700
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/708 (63%), Positives = 548/708 (77%), Gaps = 37/708 (5%)
Query: 3 DDSIDLFSTLPPQSQGSSEKLKKSGEIPDSPA------------------------FANQ 38
DDS DLFS +P SEK ++ + P +PA
Sbjct: 2 DDSNDLFSGMP-----LSEK-REEAQKPAAPAERPPVTAALAAAAAPPAAGASARPAPAA 55
Query: 39 SASDNYDASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIE 98
S SD+Y ASSIR+LEGLEPVRMRPGMYIGGTDEKALHHLF+EVIDNAMDE +AG+AN IE
Sbjct: 56 SNSDDYGASSIRVLEGLEPVRMRPGMYIGGTDEKALHHLFAEVIDNAMDEAVAGHANFIE 115
Query: 99 VSLDGNGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGGLHGVG 158
V LD G+LTV DNGRGIPVENHP+ P KSTLE+I+T LHAGGKFD YE SGGLHGVG
Sbjct: 116 VYLDLEGYLTVSDNGRGIPVENHPQVPGKSTLEVIMTKLHAGGKFDGKAYETSGGLHGVG 175
Query: 159 ISVVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKVRNKRGTRITFRPDPKIFGD 218
+SVVNALSD+L V VAR ++ Q+FSRG+P LE+ V N+RGTR+ F PDP+IFGD
Sbjct: 176 VSVVNALSDDLEVEVARNRKLYRQRFSRGLPQGGLEELGDVHNRRGTRVRFHPDPQIFGD 235
Query: 219 KAGFDAARLLKMTQSKAYLSGRVKTCWSCDKEI-AEKYGIPEKEEFYFPGGLKTYLQTKL 277
FDAAR+ +M +SKAYL G V+ WSC+ + E +P+K F+FPGGLK YLQ +
Sbjct: 236 HMKFDAARVFRMARSKAYLFGGVEIRWSCEAGVLPEGSEVPDKAVFHFPGGLKDYLQATM 295
Query: 278 ENRSLISSEIFTGKTEKKGTHRGTVEWAIAWCEENPEITSYCNTILTDEGGTHESGLRVA 337
++ EIF GKTEK H G++EWAI W +P++ SYCNTI T EGGTHE+GLR+A
Sbjct: 296 GKEFTVTREIFAGKTEKTSGH-GSMEWAITWYGGDPQVHSYCNTIPTPEGGTHEAGLRIA 354
Query: 338 LTRGIKKYAELTQNKRAISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTVE 397
LT+G+K YAELTQNKRA I +DD+MISAVG+LSVFIREPEF GQTK KL +++AQR VE
Sbjct: 355 LTKGLKAYAELTQNKRAAQITTDDVMISAVGMLSVFIREPEFVGQTKDKLATVEAQRIVE 414
Query: 398 NALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRRKQREVNRKTAIRKLRLPGKLADCS 457
NALRDPFDHYL NP E+ KLL+WVIER+EERLRRRK++EVNRK+A+RKLRLPGKLADCS
Sbjct: 415 NALRDPFDHYLADNPNESAKLLDWVIERAEERLRRRKEKEVNRKSAVRKLRLPGKLADCS 474
Query: 458 QNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLRGKILNVASAGSEKIRNNQQIMDLV 517
QN A G ELFIVEGDSAGGSAKQARNR+NQA+LPLRGKILNVASAG EK+ NQQ+ DL+
Sbjct: 475 QNTAEGAELFIVEGDSAGGSAKQARNRANQAILPLRGKILNVASAGREKLGANQQLADLI 534
Query: 518 QALGCRTRSQYREEDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKHLFLISP 577
QALGC TRS+YR+EDLRYE++I+MTDADVDGAHIASLL+TFFYQEM +L+ HLFL P
Sbjct: 535 QALGCGTRSKYRDEDLRYERIIVMTDADVDGAHIASLLITFFYQEMPELVRGGHLFLAVP 594
Query: 578 PLFRITQGTKSVYAHDEEHKQKILE-EFKKHGKGKIEISRFKGLGEMLASQLKETAMDAN 636
PL++ITQG+KS YA D+ H+ ++++ EFK GK K+EISRFKGLGEM+ +QLKET MD +
Sbjct: 595 PLYKITQGSKSAYARDDNHRAELMQTEFK--GKAKVEISRFKGLGEMMPAQLKETTMDPS 652
Query: 637 KRTLLRVEINKDLNSLKDTQDSINKLMGTKADERFKFIQERASFIDDV 684
KRTLL+V I D + T+ +++ LMGTK + RF+FIQ+RA+F +++
Sbjct: 653 KRTLLKVLI--DEVDFEGTRSAVDDLMGTKPEARFRFIQDRAAFAENL 698