PSIBLAST alignment of GI: 254780222 and protein with PDB id: 1pvg

>gi|34810356|pdb|1PVG|A Chain A, Crystal Structure Of The Atpase Region Of Saccharomyces Cerevisiae Topoisomerase Ii Length = 418
>gi|34810357|pdb|1PVG|B Chain B, Crystal Structure Of The Atpase Region Of Saccharomyces Cerevisiae Topoisomerase Ii Length = 418
 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 84/413 (20%), Positives = 152/413 (36%), Gaps = 41/413 (9%)

Query: 34  AFANQSASDNYDASSIRILEGLEPVRMRPGMYIGGTDE---------------------- 71
           +    SASD Y     + +  LE +  RP  YIG  +                       
Sbjct: 7   STEPVSASDKY-----QKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCXIEKNVTI 61

Query: 72  -KALHHLFSEVIDNAMDEVIAGYA-NLIEVSLD-GNGFLTVVDNGRGIPVENHPKFPNKS 128
              L  +F E++ NA D  +   +   I+V++      + V ++G+GIP+E H K  N  
Sbjct: 62  VPGLFKIFDEILVNAADNKVRDPSXKRIDVNIHAEEHTIEVKNDGKGIPIEIHNK-ENIY 120

Query: 129 TLEIILTTLHAGGKFDNSTYEISGGLHGVGISVVNALSDELHVTVARQN--TIFSQKFSR 186
             E I   L     +D+   +++GG +G G  + N  S E  +  A  N    + QK+  
Sbjct: 121 IPEXIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWEN 180

Query: 187 GIPLSPLEKKEKVRN-KRGTRITFRPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCW 245
              +    K    +     T++TF+PD   FG K   +    +   +             
Sbjct: 181 NXSICHPPKITSYKKGPSYTKVTFKPDLTRFGXKELDNDILGVXRRRVYDINGSVRDINV 240

Query: 246 SCDKEIAEKYGIPEKEEFYFPGGLKTYLQTKLENRSLISSEIFTGKTEKKGTHRGTVEWA 305
             + +   K    +     +   L+   Q          S+I T   E+        E A
Sbjct: 241 YLNGKSL-KIRNFKNYVELYLKSLEKKRQLDNGEDGAAKSDIPTILYER---INNRWEVA 296

Query: 306 IAWCEENPEITSYCNTILTDEGGTHESGLRVALTRGIKKYAELTQNKRAISIISDDLMIS 365
            A  + + +  S+ N+I T  GGTH + +       +KK +E+ + K+  S+ S  +  +
Sbjct: 297 FAVSDISFQQISFVNSIATTXGGTHVNYITDQ---IVKKISEILKKKKKKSVKSFQIKNN 353

Query: 366 AVGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKL 418
               ++  I  P F  QTK +L +          +   + + + +  +     
Sbjct: 354 XFIFINCLIENPAFTSQTKEQLTTRVKDFGSRCEIPLEYINKIXKTDLATRXF 406