PSIBLAST alignment of GI: 254780222 and protein with PDB id: 1s16
>gi|48425515|pdb|1S16|A Chain A, Crystal Structure Of E. Coli Topoisomerase Iv Pare 43kda Subunit Complexed With Adpnp Length = 390
>gi|48425516|pdb|1S16|B Chain B, Crystal Structure Of E. Coli Topoisomerase Iv Pare 43kda Subunit Complexed With Adpnp Length = 390
Score = 299 bits (766), Expect = 8e-79, Method: Composition-based stats.
Identities = 143/404 (35%), Positives = 212/404 (52%), Gaps = 19/404 (4%)
Query: 41 SDNYDASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVS 100
+ Y+A +I +L GLEPVR RPGMY TD +HL EVIDN++DE +AG+A ++V
Sbjct: 2 TQTYNADAIEVLTGLEPVRRRPGMY---TDTTRPNHLGQEVIDNSVDEALAGHAKRVDVI 58
Query: 101 LDGNGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGGLHGVGIS 160
L + L V+D+GRG+PV+ HP+ +E+IL LHAGGKF N Y+ SGGLHGVGIS
Sbjct: 59 LHADQSLEVIDDGRGMPVDIHPE-EGVPAVELILCRLHAGGKFSNKNYQFSGGLHGVGIS 117
Query: 161 VVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKV-RNKRGTRITFRPDPKIFGDK 219
VVNALS + V V R +++ F G + L+ + GT + F PD + F D
Sbjct: 118 VVNALSKRVEVNVRRDGQVYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPD-ETFFDS 176
Query: 220 AGFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFPGGLKTYLQTKLEN 279
F +RL + ++KA L V+ + + E + + + GL YL +
Sbjct: 177 PRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTE-------QRWCYQDGLNDYLAEAVNG 229
Query: 280 RSLISSEIFTGKTEKKGTHRGTVEWAIAWCEENPE--ITSYCNTILTDEGGTHESGLRVA 337
+ + F G V+WA+ W E E SY N I T +GGTH +GLR
Sbjct: 230 LPTLPEKPFIGNFAGDTE---AVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQG 286
Query: 338 LTRGIKKYAELTQ-NKRAISIISDDLMISAVGILSVFIREPEFAGQTKTKLVSLDAQRTV 396
L ++++ E R + + ++D+ +LSV +++P+FAGQTK +L S V
Sbjct: 287 LLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFV 346
Query: 397 ENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRRKQREVNR 440
++D F +L QN A L E I ++ R+R K+ +
Sbjct: 347 SGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKK 390