PSIBLAST alignment of GI: 254780222 and protein with PDB id: 2rgr

>gi|163931058|pdb|2RGR|A Chain A, Topoisomerase Iia Bound To G-Segment Dna Length = 759

 Score =  174 bits (441), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 15/224 (6%)

Query: 462 HGTELFIVEGDSAGGSAKQA---RNRSNQAVLPLRGKILNVASAGSEKIRNNQQIMDLVQ 518
           +   L + EGDSA   A        R      PLRGK+LNV  A +++I  N +I  + +
Sbjct: 23  YKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKK 82

Query: 519 ALGCRTRSQYREED-LRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIE-QKHLFLIS 576
            +G + R +Y +   LRY  ++IMTD D DG+HI  L++ F       L++ Q  L    
Sbjct: 83  IMGLQHRKKYEDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESSFLGLLDIQGFLLEFI 142

Query: 577 PPLFRI---TQGTKSVYAHDEEHKQKILEEFKKHGKGKIEISRFKGLGEMLASQLKETAM 633
            P+ ++        ++  ++    +K  EE  +  K   +   +KGLG  LA +++E   
Sbjct: 143 TPIIKVSITKPTKNTIAFYNMPDYEKWREE--ESHKFTWKQKYYKGLGTSLAQEVREYFS 200

Query: 634 DANKRTLLRVEINKDLNSLKDTQDSINKLMGTKADERFKFIQER 677
           + ++   L++  +   N       + +K    KAD+R +++++ 
Sbjct: 201 NLDRH--LKIFHSLQGNDKDYIDLAFSK---KKADDRKEWLRQY 239