PSIBLAST alignment of GI: 254780222 and protein with PDB id: 3foe
>gi|224036404|pdb|3FOE|C Chain C, Structural Insight Into The Quinolone-Dna Cleavage Complex Of Type Iia Topoisomerases Length = 268
>gi|224036405|pdb|3FOE|D Chain D, Structural Insight Into The Quinolone-Dna Cleavage Complex Of Type Iia Topoisomerases Length = 268
Score = 278 bits (710), Expect = 3e-72, Method: Composition-based stats.
Identities = 101/251 (40%), Positives = 146/251 (58%), Gaps = 12/251 (4%)
Query: 434 KQREVNRKTAIRKLRLPGKLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLR 493
+ + K K L GKL EL++VEGDSAGGSAKQ R+R QA+LPLR
Sbjct: 18 DDDDKHMKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLR 77
Query: 494 GKILNVASAGSEKIRNNQQIMDLVQALGCRTRSQYREEDLRYEKVIIMTDADVDGAHIAS 553
GK++N A A I N++I ++ +G + + ED Y+K+IIMTDAD DGAHI +
Sbjct: 78 GKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQT 137
Query: 554 LLLTFFYQEMYDLIEQKHLFLISPPLFRITQGT----KSVYAHDEEHKQKILEEFKKHGK 609
LLLTFFY+ M L+E H+++ PPL+++++G + YA + +++ ++F K
Sbjct: 138 LLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELRKQFGKGA- 196
Query: 610 GKIEISRFKGLGEMLASQLKETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMGTKADE 669
+ R+KGLGEM A QL ET M+ RTL+RV I L + +N LMG K +
Sbjct: 197 ---TLQRYKGLGEMNADQLWETTMNPETRTLIRVTIED----LARAERRVNVLMGDKVEP 249
Query: 670 RFKFIQERASF 680
R K+I++ F
Sbjct: 250 RRKWIEDNVKF 260