RPSBLAST alignment for GI: 254780222 and conserved domain: TIGR01058
>gnl|CDD|130130 TIGR01058, parE_Gpos, DNA topoisomerase IV, B subunit, Gram-positive. Operationally, topoisomerase IV is a type II topoisomerase required for the decatenation step of chromosome segregation. Not every bacterium has both a topo II and a topo IV. The topo IV families of the Gram-positive bacteria and the Gram-negative bacteria appear not to represent a single clade among the type II topoisomerases, and are represented by separate models for this reason. Length = 637
Score = 473 bits (1219), Expect = e-134
Identities = 259/651 (39%), Positives = 371/651 (56%), Gaps = 34/651 (5%)
Query: 41 SDNYDASSIRILEGLEPVRMRPGMYIGGTDEKALHHLFSEVIDNAMDEVIAGYANLIEVS 100
+ Y+A +I+ILEGL+ VR RPGMYIG TD K LHHL E++DN++DEV+AGYA+ I V+
Sbjct: 2 ASKYNADAIKILEGLDAVRKRPGMYIGSTDSKGLHHLVWEIVDNSVDEVLAGYADNITVT 61
Query: 101 LDGNGFLTVVDNGRGIPVENHPKFPNKSTLEIILTTLHAGGKFDNSTYEISGGLHGVGIS 160
L + +TV D+GRGIP H + N ST+E + T LHAGGKFD Y+ +GGLHGVG S
Sbjct: 62 LHKDNSITVQDDGRGIPTGIH-QDGNISTVETVFTVLHAGGKFDQGGYKTAGGLHGVGAS 120
Query: 161 VVNALSDELHVTVARQNTIFSQKFSRGIPLSPLEKKEKVRNKRGTRITFRPDPKIFGDKA 220
VVNALS L VTV R I+ Q+F G + KK K GT + F PDP IF
Sbjct: 121 VVNALSSWLEVTVKRDGQIYQQRFENGGKIVQSLKKIGTTKKTGTLVHFHPDPTIF-KTT 179
Query: 221 GFDAARLLKMTQSKAYLSGRVKTCWSCDKEIAEKYGIPEKEEFYFPGGLKTYLQTKLENR 280
F++ + + + A+L ++K ++ DK + F++ GL ++ E +
Sbjct: 180 QFNSNIIKERLKESAFLLKKLKLTFT-DKRTNKTT------VFFYENGLVDFVDYINETK 232
Query: 281 SLISSEIFTGKTEKKGTHRG-TVEWAIAWCEENPE-ITSYCNTILTDEGGTHESGLRVAL 338
E + T +G G VE A + + + E I S+ N++ T EGGTHE+G ++A+
Sbjct: 233 -----ETLSQVTYFEGEKNGIEVEVAFQFNDGDSENILSFANSVKTKEGGTHENGFKLAI 287
Query: 339 TRGIKKYAELTQ--NKRAISIISDDLMISAVGILSVFIREP--EFAGQTKTKLVSLDAQR 394
T I YA ++ ++ D+ I+SV I E +F GQTK+KL S +A+
Sbjct: 288 TDVINSYARKYNLLKEKDKNLEGSDIREGLSAIISVRIPEELIQFEGQTKSKLFSPEARN 347
Query: 395 TVENALRDPFDHYLVQNPIEATKLLEWVIERSEERLRRRKQREVNRKTAIRK---LRLPG 451
V+ ++D +L +N +A L++ I+ + + +K RE + K L G
Sbjct: 348 VVDEIVQDHLFFFLEENNNDAKLLIDKAIKARDAKEAAKKAREEKKSGKKPKKEKGILSG 407
Query: 452 KLADCSQNIAHGTELFIVEGDSAGGSAKQARNRSNQAVLPLRGKILNVASAGSEKIRNNQ 511
KL ELF+VEGDSAGGSAKQ R+R QA+LPLRGK+LNV A I N+
Sbjct: 408 KLTPAQSKNPAKNELFLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAKLADILKNE 467
Query: 512 QIMDLVQALGCRTRSQYREEDLRYEKVIIMTDADVDGAHIASLLLTFFYQEMYDLIEQKH 571
+I ++ +G + + +DL+Y+K+IIMTDAD DGAHI LLLTFFY+ M LIE H
Sbjct: 468 EINTIIFCIGTGIGADFSIKDLKYDKIIIMTDADTDGAHIQVLLLTFFYRYMRPLIELGH 527
Query: 572 LFLISPPLFRITQGT--KSVYAHDEEHKQKILEEFKKHGKGKIEISRFKGLGEMLASQLK 629
+++ PPL+++++ K YA + LE KK K + R+KGLGEM A QL
Sbjct: 528 VYIALPPLYKLSKKDGKKVKYAWSDLE----LESVKKKLKN-YTLQRYKGLGEMNADQLW 582
Query: 630 ETAMDANKRTLLRVEINKDLNSLKDTQDSINKLMGTKADERFKFIQERASF 680
ET M+ RTL+RV+I+ + + IN LMG K + R K+I+ +F
Sbjct: 583 ETTMNPETRTLVRVKIDDLARAER----QINTLMGDKVEPRKKWIEANINF 629