RPSBLAST alignment of GI: 254780222 and protein with PDBid: 1pvg

>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* Length = 418

 Score =  277 bits (709), Expect = 7e-75
 Identities = 87/425 (20%), Positives = 160/425 (37%), Gaps = 37/425 (8%)

Query: 35  FANQSASDNYDASSIRILEGLEPVRMRPGMYIGGTDEK---------------------- 72
               S      +   + +  LE +  RP  YIG  + +                      
Sbjct: 3   MVTMSTEPVSASDKYQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIV 62

Query: 73  -ALHHLFSEVIDNAMDEVIAGYA-NLIEVSLDG-NGFLTVVDNGRGIPVENHPKFPNKST 129
             L  +F E++ NA D  +   +   I+V++      + V ++G+GIP+E H K  N   
Sbjct: 63  PGLFKIFDEILVNAADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNK-ENIYI 121

Query: 130 LEIILTTLHAGGKFDNSTYEISGGLHGVGISVVNALSDELHVTVARQNT--IFSQKFSRG 187
            E+I   L     +D+   +++GG +G G  + N  S E  +  A  N    + QK+   
Sbjct: 122 PEMIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENN 181

Query: 188 IPLSPLEKKEK-VRNKRGTRITFRPDPKIFGDKAGFDAARLLKMTQSKAYLSGRVKTCWS 246
           + +    K     +    T++TF+PD   FG K   D   L  M +    ++G V+    
Sbjct: 182 MSICHPPKITSYKKGPSYTKVTFKPDLTRFGMK-ELDNDILGVMRRRVYDINGSVRDINV 240

Query: 247 CDKEIAEKYGIPEKEEFYFPGGLKTYLQTKLENRSLISSEIFTGKTEKKGTHRGTVEWAI 306
                + K    +     +   L+   Q          S+I T   E+        E A 
Sbjct: 241 YLNGKSLKIRNFKNYVELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNR---WEVAF 297

Query: 307 AWCEENPEITSYCNTILTDEGGTHESGLRVALTRGIKKYAELTQNKRAISIISDDLMISA 366
           A  + + +  S+ N+I T  GGTH + +   + + I +           S+ S  +  + 
Sbjct: 298 AVSDISFQQISFVNSIATTMGGTHVNYITDQIVKKISEIL---XXXXXXSVKSFQIKNNM 354

Query: 367 VGILSVFIREPEFAGQTKTKLVSLDAQRTVENALRDPFDHYLVQNPIEATKLLEWVIERS 426
              ++  I  P F  QTK +L +          +   + + +++  + AT++ E      
Sbjct: 355 FIFINCLIENPAFTSQTKEQLTTRVKDFGSRCEIPLEYINKIMKTDL-ATRMFEIADANE 413

Query: 427 EERLR 431
           E  L+
Sbjct: 414 ENALK 418