RPSBLAST alignment of GI: 254780222 and protein with PDBid: 3l4j

>3l4j_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, covalently linked comple supercoiling; HET: DNA PTR TSP; 2.48A {Saccharomyces cerevisiae} PDB: 3l4k_A* 1bjt_A 1bgw_A 2rgr_A* Length = 757

 Score =  216 bits (551), Expect = 1e-56
 Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 13/211 (6%)

Query: 452 KLADCSQNI---AHGTELFIVEGDSA-----GGSAKQARNRSNQAVLPLRGKILNVASAG 503
           KL D ++      +   L + EGDSA      G A   R+       PLRGK+LNV  A 
Sbjct: 8   KLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDY--YGCYPLRGKMLNVREAS 65

Query: 504 SEKIRNNQQIMDLVQALGCRTRSQYRE-EDLRYEKVIIMTDADVDGAHIASLLLTFFYQE 562
           +++I  N +I  + + +G + R +Y + + LRY  ++IMTD D DG+HI  L++ F    
Sbjct: 66  ADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDQDHDGSHIKGLIINFLESS 125

Query: 563 MYDLIEQK-HLFLISPPLFRITQGTKSVYAHDEEHKQKILEEFKKHGKG-KIEISRFKGL 620
              L++ +  L     P+ +++    +       +     +  ++       +   +KGL
Sbjct: 126 FPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYNMPDYEKWREEESHKFTWKQKYYKGL 185

Query: 621 GEMLASQLKETAMDANKRTLLRVEINKDLNS 651
           G  LA +++E   + ++   +   +  +   
Sbjct: 186 GTSLAQEVREYFSNLDRHLKIFHSLQGNDKD 216