HHsearch alignment for GI: 254780223 and conserved domain: TIGR02872
>TIGR02872 spore_ytvI sporulation integral membrane protein YtvI; InterPro: IPR014227 This entry contains the sporulation protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E . Second, mutation leads to a sporulation defect. Third, it is found in exactly those genomes whose bacteria are capable of sporulation, except that it is absent in Clostridium acetobutylicum ATCC 824. YtvI has extensive hydrophobic regions and is likely to be an integral membrane protein..
Probab=98.19 E-value=0.00043 Score=42.83 Aligned_cols=209 Identities=14% Similarity=0.128 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999899999998318880599999999999999999999999999999999
Q gi|254780223|r 13 RWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMKEL 92 (360)
Q Consensus 13 ~~l~~~~~~~~l~~~~~~l~pi~~a~~la~ll~p~~~~l~~~~~~~~~~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~~~ 92 (360)
T Consensus 1 r~~~~~~~~~~~~~~~~~~~p~~~Pf~~Al~~A~~l~P~V~~L~~k~~~pR~lav~i~l~~f~~~~~~~l~~~Vt~~v~~ 80 (350)
T TIGR02872 1 RLILLILLIAILVLAIYFILPYSLPFVIALILALILEPAVRFLEKKLKLPRALAVLIVLLIFLGIIGGLLYILVTELVTE 80 (350)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999899999999999999999999999999999704478999862588507899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999788899-99985--10000133666654222456----766665566555677899999999999999998
Q gi|254780223|r 93 VSKVVLANQHGIPVP-RWLSD--IPGGMWASELWTKHLSHPQS----LKILSETFLKTNGIDFIPRFASRFGMIFLDYCL 165 (360)
Q Consensus 93 ~~~l~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 165 (360)
T Consensus 81 ~~~L~~~~P~~~~~~v~y~e~~f~~~i~~l~~~~~~~~~~Lp~~~~~~I~~~i~~~~~~~~~~~~~~~~~~~~~i~~f~~ 160 (350)
T TIGR02872 81 TIALAENLPQYLNEIVLYLEKLFNDHILPLIDDLESYYDSLPPGQQYTITDNIQTLLEKLLNYVAEFATNLITSITSFIA 160 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988899999999999999999999999999888616946999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 66789998997522889899999995---000231579999999999888878999999
Q gi|254780223|r 166 SIIFMIIALFFFYRDGFSISQQLDSL---GEHLFPAYWKKISRIVPKVIRSTFLGMTII 221 (360)
Q Consensus 166 ~~~i~~~~~~~~l~~~~~~~~~~~~~---~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 221 (360)
T Consensus 161 ~~P~~l~~~~~~LiA~Ffis~Dl~~l~~~~~~~lP~~~~~~~~~i~~~~~k~~~Gf~KA 219 (350)
T TIGR02872 161 SIPNFLIVLLFTLIATFFISKDLPRLKSKLFSILPERTSQKLKNIFSELKKALFGFLKA 219 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98899999999999999987339999999987665789999999999999999999999