HHsearch alignment for GI: 254780223 and conserved domain: pfam01594
>pfam01594 UPF0118 Domain of unknown function DUF20. This transmembrane region is found in putative permeases and predicted transmembrane proteins it has no known function. It is not clear what source suggested that these proteins may be permeases and this information should be treated with caution.
Probab=100.00 E-value=0 Score=357.27 Aligned_cols=325 Identities=20% Similarity=0.316 Sum_probs=286.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999998999999983188805999999999999999999999999999999
Q gi|254780223|r 11 IMRWMIMFIILVSLYFLKGFFAPVLSALIIGFTSWPIYSSFISKKEESSTFLAVIATVSVMCLFIVPLLFLFYYGMLEMK 90 (360)
Q Consensus 11 ~~~~l~~~~~~~~l~~~~~~l~pi~~a~~la~ll~p~~~~l~~~~~~~~~~~a~l~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (360)
T Consensus 2 ~l~i~~~~~~~~~l~~~~~~l~p~~~a~~ia~~~~P~~~~l~~~-~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 80 (327)
T pfam01594 2 LLILIFLLLILAFIWFINDLLVPLLIALVLAYLLNPVVRFLKRR-GIPRSLAILLVLLLFLVALVLLGLLLIPLLIIQLT 80 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999999999999999999999999999870-89816999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999788899999851000013366665422245676666556655567789999999999999999866789
Q gi|254780223|r 91 ELVSKVVLANQHGIPVPRWLSDIPGGMWASELWTKHLSHPQSLKILSETFLKTNGIDFIPRFASRFGMIFLDYCLSIIFM 170 (360)
Q Consensus 91 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~ 170 (360)
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 150 (327)
T pfam01594 81 QLIKSLPQYIDSLLNWLNELPELLPEL----------ENVIQQLNSSLSDILSNILSSILNSLLSLLASLPGLLLQLILV 150 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999987999999999999888750444----------3347788888999999889999999999999999999999999
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 99899752288989999999500023157999999999988887899999999999999998763399824799999999
Q gi|254780223|r 171 IIALFFFYRDGFSISQQLDSLGEHLFPAYWKKISRIVPKVIRSTFLGMTIIAIGEGLVLGSAYWLAGVPSHVALGVITAI 250 (360)
Q Consensus 171 ~~~~~~~l~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~gi~~~i~~~i~Gvp~a~llgil~~i 250 (360)
T Consensus 151 ~~~~f~~l~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~i~~y~~~~~i~a~~~g~~~~i~~~i~gvp~~~~lg~l~~i 230 (327)
T pfam01594 151 LVLTFFFLLDGERLRQGIISFLPKRYRERVDAILREINDTLGGYLLGQVIVALIIGVLTFIGLLILGVPYALLLALLVGL 230 (327)
T ss_pred HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 99999999686898989998686001799999999999999999999999999999999999999388749999999999
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 988311456-9999999999972886999999999999999702454556651546888999999999999998897999
Q gi|254780223|r 251 MAMIPGGAP-ISFTAVSIYLLIKGNIFNATCLFLWGAIELFIVDKTLRPFLVGGPIKLPFLPTFFGLVGGVRTMGLLGLF 329 (360)
Q Consensus 251 ~~~IP~~G~-i~~~~~~~~~~~~~~~~~~i~~~i~~~~v~~~~~~il~P~l~g~~~~l~p~~vllsi~~g~~l~G~~G~i 329 (360)
T Consensus 231 l~~IP~vG~~i~~ip~~~~~~~~~~~~~ai~~~~~~~~v~~i~~~~l~P~l~g~~~~l~p~~~l~~i~~g~~~~G~~G~~ 310 (327)
T pfam01594 231 ANLIPYIGPVIILIPIAIYALLTGGIWAGLIVLIGVLLIQQIEDNILRPKLMGKRLGLHPLVILLSLIGGGSLFGLVGLI 310 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987530599999999999998688999999999999999966600110246889998999999999999998696999
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998
Q gi|254780223|r 330 IGPVLMALIAVIWKESI 346 (360)
Q Consensus 330 lg~p~~a~~~~i~~~~~ 346 (360)
T Consensus 311 lg~pi~~~~~~~~~~~~ 327 (327)
T pfam01594 311 LAPPLTAVLKAILDAYR 327 (327)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999749